Query 015283
Match_columns 410
No_of_seqs 148 out of 1671
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 04:50:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015283.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015283hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 2E-61 4.3E-66 427.9 35.7 395 10-406 2-396 (396)
2 PLN02397 aspartate transaminas 100.0 1.6E-56 3.5E-61 430.5 41.4 408 1-409 15-422 (423)
3 PTZ00376 aspartate aminotransf 100.0 1E-55 2.2E-60 424.0 40.2 398 10-408 5-403 (404)
4 PRK09257 aromatic amino acid a 100.0 3.3E-55 7.2E-60 419.8 40.5 393 10-406 2-396 (396)
5 KOG1411 Aspartate aminotransfe 100.0 3E-55 6.4E-60 380.1 30.3 402 6-408 24-425 (427)
6 COG0436 Aspartate/tyrosine/aro 100.0 1.5E-53 3.3E-58 402.4 32.4 353 27-409 20-392 (393)
7 KOG1412 Aspartate aminotransfe 100.0 1.9E-51 4.1E-56 351.7 33.1 403 6-409 2-406 (410)
8 KOG0257 Kynurenine aminotransf 100.0 1.2E-49 2.5E-54 356.5 21.9 368 8-404 7-415 (420)
9 PLN00175 aminotransferase fami 100.0 5.3E-48 1.1E-52 370.6 30.7 362 7-407 30-412 (413)
10 PRK07681 aspartate aminotransf 100.0 3.1E-47 6.7E-52 365.1 30.3 365 7-405 3-385 (399)
11 PLN02187 rooty/superroot1 100.0 8E-47 1.7E-51 366.0 33.3 353 33-409 65-439 (462)
12 PLN00143 tyrosine/nicotianamin 100.0 9.4E-47 2E-51 362.0 32.9 368 18-409 16-405 (409)
13 PRK07366 succinyldiaminopimela 100.0 7.2E-47 1.6E-51 361.6 30.4 342 33-406 29-388 (388)
14 PLN00145 tyrosine/nicotianamin 100.0 6E-46 1.3E-50 357.7 33.9 354 33-409 51-425 (430)
15 PTZ00377 alanine aminotransfer 100.0 3.7E-46 8E-51 364.8 32.8 360 34-408 46-475 (481)
16 PRK08068 transaminase; Reviewe 100.0 2.3E-46 5E-51 358.1 30.3 362 11-405 7-386 (389)
17 PLN02656 tyrosine transaminase 100.0 6.3E-46 1.4E-50 356.6 33.2 352 30-409 27-404 (409)
18 PRK06855 aminotransferase; Val 100.0 7.4E-46 1.6E-50 357.9 33.7 355 34-408 32-429 (433)
19 PRK13355 bifunctional HTH-doma 100.0 7.6E-46 1.7E-50 365.4 32.7 377 7-408 117-514 (517)
20 PRK08636 aspartate aminotransf 100.0 6.2E-46 1.3E-50 356.4 31.2 347 33-409 32-401 (403)
21 PRK06207 aspartate aminotransf 100.0 7.5E-46 1.6E-50 355.4 31.6 345 34-409 39-403 (405)
22 PRK09276 LL-diaminopimelate am 100.0 6E-46 1.3E-50 355.1 30.0 365 7-404 2-384 (385)
23 PRK08960 hypothetical protein; 100.0 8.3E-46 1.8E-50 354.0 30.6 360 11-407 7-386 (387)
24 PRK07682 hypothetical protein; 100.0 6.4E-46 1.4E-50 354.0 29.8 341 34-409 20-377 (378)
25 PLN02450 1-aminocyclopropane-1 100.0 2.3E-45 5E-50 356.4 34.0 354 28-409 31-431 (468)
26 PRK09147 succinyldiaminopimela 100.0 1.4E-45 3.1E-50 353.5 32.2 361 12-407 4-395 (396)
27 PRK06348 aspartate aminotransf 100.0 1E-45 2.2E-50 352.8 30.1 338 34-405 29-382 (384)
28 TIGR03540 DapC_direct LL-diami 100.0 1.9E-45 4E-50 351.4 30.5 340 32-404 27-382 (383)
29 PRK09148 aminotransferase; Val 100.0 2.3E-45 5E-50 352.2 31.2 366 10-408 4-390 (405)
30 PLN02607 1-aminocyclopropane-1 100.0 4.1E-45 9E-50 351.9 32.8 354 27-408 39-437 (447)
31 PLN02231 alanine transaminase 100.0 6.9E-45 1.5E-49 355.8 34.5 355 33-409 128-528 (534)
32 PRK07337 aminotransferase; Val 100.0 2.7E-45 5.9E-50 350.7 29.6 361 9-406 3-387 (388)
33 PLN02376 1-aminocyclopropane-1 100.0 8.7E-45 1.9E-49 353.3 33.5 353 32-408 43-438 (496)
34 TIGR01264 tyr_amTase_E tyrosin 100.0 6.5E-45 1.4E-49 349.5 32.0 366 19-409 14-400 (401)
35 PRK06107 aspartate aminotransf 100.0 5.2E-45 1.1E-49 349.9 30.9 344 33-409 32-401 (402)
36 PRK06290 aspartate aminotransf 100.0 7.6E-45 1.7E-49 347.9 31.4 341 34-409 44-406 (410)
37 KOG0259 Tyrosine aminotransfer 100.0 1.7E-44 3.8E-49 317.5 30.9 366 19-408 42-433 (447)
38 PRK05957 aspartate aminotransf 100.0 1.1E-44 2.4E-49 346.1 31.1 366 10-409 5-386 (389)
39 PRK05942 aspartate aminotransf 100.0 9.8E-45 2.1E-49 347.3 30.7 340 33-405 34-389 (394)
40 PRK06108 aspartate aminotransf 100.0 1E-44 2.3E-49 346.6 30.6 342 34-407 24-381 (382)
41 PTZ00433 tyrosine aminotransfe 100.0 2.4E-44 5.2E-49 346.2 33.2 363 24-409 22-409 (412)
42 PRK12414 putative aminotransfe 100.0 6.5E-45 1.4E-49 347.1 28.8 336 33-404 28-383 (384)
43 TIGR03538 DapC_gpp succinyldia 100.0 3E-44 6.6E-49 343.9 31.9 358 13-405 4-392 (393)
44 PRK07309 aromatic amino acid a 100.0 3.6E-44 7.9E-49 342.8 31.9 363 11-409 9-389 (391)
45 PRK07683 aminotransferase A; V 100.0 2.3E-44 5E-49 343.7 30.4 360 11-408 7-383 (387)
46 PRK05764 aspartate aminotransf 100.0 3.2E-44 7E-49 344.3 30.7 369 7-409 2-392 (393)
47 PRK07324 transaminase; Validat 100.0 2.2E-44 4.8E-49 341.7 28.6 334 33-409 25-371 (373)
48 PRK08912 hypothetical protein; 100.0 5.8E-44 1.3E-48 341.4 30.9 340 34-408 26-386 (387)
49 PRK07590 L,L-diaminopimelate a 100.0 4.6E-44 9.9E-49 344.1 30.2 338 34-406 34-409 (409)
50 PRK08361 aspartate aminotransf 100.0 4.7E-44 1E-48 342.4 28.7 342 34-408 33-390 (391)
51 PRK05839 hypothetical protein; 100.0 8.6E-44 1.9E-48 338.0 29.6 347 18-408 5-374 (374)
52 PRK08363 alanine aminotransfer 100.0 2E-43 4.3E-48 338.8 31.3 348 33-408 29-394 (398)
53 PRK09082 methionine aminotrans 100.0 6.6E-44 1.4E-48 340.6 27.3 336 34-404 30-385 (386)
54 PRK08637 hypothetical protein; 100.0 1.3E-42 2.7E-47 331.8 35.5 361 35-409 4-387 (388)
55 TIGR01265 tyr_nico_aTase tyros 100.0 5.1E-43 1.1E-47 336.2 32.3 366 20-409 15-402 (403)
56 COG1168 MalY Bifunctional PLP- 100.0 1E-42 2.3E-47 308.9 31.4 346 33-409 24-387 (388)
57 PRK07777 aminotransferase; Val 100.0 4E-43 8.6E-48 335.7 31.0 358 13-407 6-385 (387)
58 PRK07550 hypothetical protein; 100.0 4.1E-43 8.8E-48 335.5 30.7 363 11-405 4-384 (386)
59 PRK07568 aspartate aminotransf 100.0 6.7E-43 1.4E-47 335.7 31.9 368 7-409 1-393 (397)
60 PRK09265 aminotransferase AlaT 100.0 1.5E-42 3.2E-47 333.3 33.8 373 12-409 9-402 (404)
61 PRK08175 aminotransferase; Val 100.0 7.6E-43 1.6E-47 334.3 31.1 343 33-408 28-389 (395)
62 TIGR03537 DapC succinyldiamino 100.0 1.5E-42 3.2E-47 327.1 30.8 330 36-405 2-350 (350)
63 PRK09275 aspartate aminotransf 100.0 3.2E-43 6.9E-48 339.3 26.7 339 35-408 101-517 (527)
64 COG1167 ARO8 Transcriptional r 100.0 1.6E-42 3.5E-47 334.6 31.1 347 34-409 89-456 (459)
65 PRK15481 transcriptional regul 100.0 1.4E-42 2.9E-47 336.2 27.8 331 34-407 85-430 (431)
66 PLN02368 alanine transaminase 100.0 3E-42 6.6E-47 327.8 29.4 343 12-369 14-403 (407)
67 PF00155 Aminotran_1_2: Aminot 100.0 4.8E-43 1E-47 333.0 23.9 345 35-402 2-363 (363)
68 PRK07865 N-succinyldiaminopime 100.0 4.5E-42 9.9E-47 325.7 28.2 348 7-403 1-363 (364)
69 TIGR03542 DAPAT_plant LL-diami 100.0 2.1E-41 4.7E-46 324.9 30.2 337 33-406 32-402 (402)
70 TIGR03801 asp_4_decarbox aspar 100.0 2.3E-41 4.9E-46 326.1 26.9 339 35-408 95-516 (521)
71 PRK02610 histidinol-phosphate 100.0 1E-40 2.2E-45 317.2 30.8 333 34-409 28-372 (374)
72 PRK06836 aspartate aminotransf 100.0 1.8E-40 4E-45 317.6 31.6 338 34-409 33-392 (394)
73 TIGR03539 DapC_actino succinyl 100.0 1.1E-40 2.4E-45 315.1 27.0 334 20-402 8-356 (357)
74 PRK01533 histidinol-phosphate 100.0 8.3E-41 1.8E-45 315.8 25.7 322 34-408 29-355 (366)
75 PLN02672 methionine S-methyltr 100.0 3E-40 6.4E-45 336.7 29.9 346 33-407 696-1079(1082)
76 PRK14809 histidinol-phosphate 100.0 1.1E-39 2.3E-44 308.7 29.7 332 18-407 15-356 (357)
77 PRK09440 avtA valine--pyruvate 100.0 7.8E-40 1.7E-44 315.9 28.9 346 31-408 27-411 (416)
78 KOG0256 1-aminocyclopropane-1- 100.0 1.1E-39 2.3E-44 289.9 27.0 316 71-408 115-461 (471)
79 PRK03317 histidinol-phosphate 100.0 1.6E-39 3.4E-44 308.8 29.4 329 35-408 27-364 (368)
80 PRK06358 threonine-phosphate d 100.0 3.4E-39 7.4E-44 304.2 29.6 323 34-406 19-353 (354)
81 PRK08056 threonine-phosphate d 100.0 7.2E-39 1.6E-43 302.6 29.8 338 17-407 4-354 (356)
82 PRK03158 histidinol-phosphate 100.0 4.3E-39 9.3E-44 305.0 27.3 319 35-406 30-359 (359)
83 PRK05387 histidinol-phosphate 100.0 6.6E-39 1.4E-43 303.2 27.5 316 34-407 24-352 (353)
84 COG0079 HisC Histidinol-phosph 100.0 1.2E-38 2.5E-43 295.9 27.9 319 35-408 23-354 (356)
85 PRK06225 aspartate aminotransf 100.0 3.4E-38 7.4E-43 300.9 30.9 333 33-409 27-377 (380)
86 PRK05166 histidinol-phosphate 100.0 1.7E-38 3.7E-43 301.7 27.6 325 33-407 35-370 (371)
87 PRK04870 histidinol-phosphate 100.0 1.8E-38 3.9E-43 300.3 27.2 320 34-406 26-356 (356)
88 PRK08153 histidinol-phosphate 100.0 4.4E-38 9.6E-43 298.3 29.7 320 35-409 33-366 (369)
89 PRK09105 putative aminotransfe 100.0 3E-38 6.4E-43 299.1 28.2 317 34-407 43-369 (370)
90 PLN03026 histidinol-phosphate 100.0 3.3E-38 7.1E-43 300.0 28.1 315 34-405 52-379 (380)
91 PRK07392 threonine-phosphate d 100.0 5.7E-38 1.2E-42 297.1 28.8 321 34-407 22-358 (360)
92 PRK14807 histidinol-phosphate 100.0 3E-37 6.5E-42 291.0 28.7 319 34-406 22-350 (351)
93 PRK07908 hypothetical protein; 100.0 7.3E-37 1.6E-41 288.4 28.6 317 32-408 20-347 (349)
94 PRK14808 histidinol-phosphate 100.0 6E-37 1.3E-41 286.4 27.2 310 34-405 19-334 (335)
95 PRK03967 histidinol-phosphate 100.0 5.9E-37 1.3E-41 287.1 26.8 310 35-409 19-335 (337)
96 PRK02731 histidinol-phosphate 100.0 8.2E-37 1.8E-41 290.4 28.0 323 33-408 31-366 (367)
97 PRK04781 histidinol-phosphate 100.0 7.4E-37 1.6E-41 289.3 26.5 297 71-407 54-362 (364)
98 PRK03321 putative aminotransfe 100.0 8.1E-37 1.8E-41 288.6 25.6 323 34-408 22-351 (352)
99 PRK06959 putative threonine-ph 100.0 1.5E-36 3.2E-41 284.0 27.1 322 15-409 6-334 (339)
100 PRK01688 histidinol-phosphate 100.0 5E-37 1.1E-41 289.2 23.4 311 35-403 29-351 (351)
101 PRK05664 threonine-phosphate d 100.0 3.9E-36 8.4E-41 280.7 27.0 302 35-408 21-328 (330)
102 PRK06425 histidinol-phosphate 100.0 4.6E-36 9.9E-41 280.6 25.0 304 35-407 17-332 (332)
103 TIGR01141 hisC histidinol-phos 100.0 5.4E-36 1.2E-40 282.5 25.2 315 34-403 19-346 (346)
104 PRK04635 histidinol-phosphate 100.0 4.8E-36 1E-40 283.1 23.7 311 34-404 31-351 (354)
105 PRK00950 histidinol-phosphate 100.0 3.8E-35 8.3E-40 278.4 27.5 313 34-407 34-361 (361)
106 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.3E-35 2.7E-40 277.4 23.8 316 18-402 2-329 (330)
107 PRK08354 putative aminotransfe 100.0 1.3E-34 2.8E-39 268.3 28.4 292 34-405 8-309 (311)
108 COG3977 Alanine-alpha-ketoisov 100.0 7.9E-33 1.7E-37 236.6 22.8 362 4-408 7-411 (417)
109 KOG0258 Alanine aminotransfera 100.0 1E-31 2.2E-36 237.4 27.8 337 54-408 88-469 (475)
110 KOG0634 Aromatic amino acid am 100.0 4E-32 8.6E-37 243.8 23.9 323 70-409 93-467 (472)
111 PRK13238 tnaA tryptophanase/L- 100.0 8.6E-32 1.9E-36 259.4 27.4 362 12-408 12-433 (460)
112 cd00609 AAT_like Aspartate ami 100.0 5.7E-31 1.2E-35 248.8 28.7 332 37-403 1-349 (350)
113 cd00617 Tnase_like Tryptophana 100.0 1.2E-27 2.6E-32 227.4 26.6 336 32-408 9-408 (431)
114 PLN02483 serine palmitoyltrans 100.0 1.8E-27 3.9E-32 231.9 26.9 334 34-409 100-467 (489)
115 PRK10534 L-threonine aldolase; 100.0 4E-27 8.7E-32 220.9 24.3 319 37-407 2-332 (333)
116 PRK06939 2-amino-3-ketobutyrat 100.0 1.4E-26 3E-31 222.7 27.5 331 33-409 41-394 (397)
117 TIGR01822 2am3keto_CoA 2-amino 100.0 2.6E-26 5.6E-31 220.4 29.3 326 33-409 37-390 (393)
118 PLN02822 serine palmitoyltrans 100.0 6.6E-27 1.4E-31 227.5 25.3 328 33-409 108-478 (481)
119 TIGR03392 FeS_syn_CsdA cystein 100.0 8E-27 1.7E-31 224.1 24.8 325 43-409 18-396 (398)
120 PRK10874 cysteine sulfinate de 100.0 7E-27 1.5E-31 224.7 24.3 328 43-409 21-399 (401)
121 KOG0633 Histidinol phosphate a 100.0 2.9E-27 6.3E-32 198.7 17.5 276 97-406 83-375 (375)
122 TIGR00858 bioF 8-amino-7-oxono 100.0 3E-26 6.5E-31 217.5 25.7 320 33-403 15-360 (360)
123 TIGR00707 argD acetylornithine 100.0 5.8E-26 1.3E-30 217.0 27.0 332 34-406 27-379 (379)
124 PRK02627 acetylornithine amino 100.0 5.4E-26 1.2E-30 218.4 26.3 334 34-409 39-395 (396)
125 TIGR01825 gly_Cac_T_rel pyrido 100.0 6E-26 1.3E-30 217.3 26.4 331 33-409 32-382 (385)
126 TIGR03576 pyridox_MJ0158 pyrid 100.0 9.3E-26 2E-30 210.7 26.9 292 54-406 35-345 (346)
127 PLN02721 threonine aldolase 99.9 1.6E-25 3.4E-30 212.0 26.8 324 35-408 6-352 (353)
128 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.2E-25 2.7E-30 213.3 25.9 315 54-409 21-369 (370)
129 cd06502 TA_like Low-specificit 99.9 4.7E-25 1E-29 207.5 27.0 310 53-405 10-338 (338)
130 PRK01278 argD acetylornithine 99.9 2.2E-25 4.9E-30 213.3 24.9 337 34-409 31-389 (389)
131 PRK09295 bifunctional cysteine 99.9 2.5E-25 5.5E-30 214.1 25.4 326 43-407 25-403 (406)
132 PRK13392 5-aminolevulinate syn 99.9 4.4E-25 9.4E-30 212.7 26.8 329 34-409 46-398 (410)
133 PRK05958 8-amino-7-oxononanoat 99.9 3.5E-25 7.7E-30 212.1 25.7 326 32-406 37-385 (385)
134 PRK03244 argD acetylornithine 99.9 5E-25 1.1E-29 211.6 26.1 327 34-409 43-395 (398)
135 PRK02948 cysteine desulfurase; 99.9 1.8E-25 3.8E-30 213.7 22.5 322 44-408 3-374 (381)
136 cd00378 SHMT Serine-glycine hy 99.9 4.4E-25 9.5E-30 212.5 24.7 329 34-408 19-385 (402)
137 TIGR01979 sufS cysteine desulf 99.9 1.1E-24 2.4E-29 209.8 26.6 329 35-409 18-402 (403)
138 cd06454 KBL_like KBL_like; thi 99.9 9.2E-25 2E-29 206.4 24.4 321 35-405 2-348 (349)
139 PF12897 Aminotran_MocR: Alani 99.9 1.6E-24 3.4E-29 193.7 23.2 313 71-407 62-414 (425)
140 cd00610 OAT_like Acetyl ornith 99.9 1.8E-24 4E-29 209.1 24.2 338 34-406 36-413 (413)
141 TIGR00713 hemL glutamate-1-sem 99.9 7.4E-24 1.6E-28 204.9 27.2 337 33-409 47-423 (423)
142 PRK02936 argD acetylornithine 99.9 1.1E-23 2.4E-28 200.8 27.5 333 34-406 29-377 (377)
143 PRK07179 hypothetical protein; 99.9 1.3E-23 2.7E-28 202.3 27.9 322 34-409 54-399 (407)
144 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.1E-24 1.3E-28 201.4 24.7 312 53-406 13-360 (361)
145 PLN02855 Bifunctional selenocy 99.9 3.6E-24 7.8E-29 207.2 23.6 327 44-409 35-419 (424)
146 cd06451 AGAT_like Alanine-glyo 99.9 2.2E-23 4.7E-28 197.5 28.5 317 48-407 5-356 (356)
147 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.9E-24 1.1E-28 205.0 23.4 325 43-402 19-397 (397)
148 TIGR03403 nifS_epsilon cystein 99.9 6.5E-24 1.4E-28 202.8 23.6 326 44-409 2-376 (382)
149 TIGR01821 5aminolev_synth 5-am 99.9 2.5E-23 5.5E-28 200.0 27.6 329 34-409 45-397 (402)
150 PRK09064 5-aminolevulinate syn 99.9 3.5E-23 7.6E-28 199.4 28.4 328 34-409 46-398 (407)
151 PRK05093 argD bifunctional N-s 99.9 1.7E-23 3.8E-28 200.9 26.1 328 34-409 40-401 (403)
152 PLN02409 serine--glyoxylate am 99.9 5.8E-23 1.3E-27 196.8 28.2 323 49-409 16-373 (401)
153 cd00613 GDC-P Glycine cleavage 99.9 1.4E-23 2.9E-28 202.0 22.6 320 35-402 21-398 (398)
154 COG0520 csdA Selenocysteine ly 99.9 7E-23 1.5E-27 193.6 26.8 325 44-407 25-404 (405)
155 PRK04073 rocD ornithine--oxo-a 99.9 8.7E-23 1.9E-27 195.6 27.3 325 34-406 40-395 (396)
156 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 9.9E-23 2.1E-27 193.0 27.2 316 49-406 6-355 (355)
157 PRK13479 2-aminoethylphosphona 99.9 4.8E-23 1E-27 196.0 24.8 319 49-409 12-364 (368)
158 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 7.6E-23 1.7E-27 195.3 25.0 316 52-409 31-382 (387)
159 PRK07049 methionine gamma-lyas 99.9 2.2E-22 4.8E-27 193.0 27.6 225 71-343 78-312 (427)
160 PRK12381 bifunctional succinyl 99.9 8.6E-23 1.9E-27 195.9 24.8 335 34-409 39-400 (406)
161 COG1104 NifS Cysteine sulfinat 99.9 4.4E-23 9.6E-28 187.8 21.1 327 43-409 3-378 (386)
162 PRK04260 acetylornithine amino 99.9 3E-22 6.4E-27 190.7 27.8 328 34-406 29-375 (375)
163 TIGR02326 transamin_PhnW 2-ami 99.9 1.8E-22 4E-27 191.6 26.3 319 49-408 10-362 (363)
164 PLN02242 methionine gamma-lyas 99.9 2.5E-22 5.4E-27 191.9 25.7 219 75-343 74-298 (418)
165 TIGR03402 FeS_nifS cysteine de 99.9 1.1E-22 2.4E-27 194.3 23.1 320 44-408 2-372 (379)
166 cd06453 SufS_like Cysteine des 99.9 8.4E-23 1.8E-27 194.8 21.7 318 44-402 2-373 (373)
167 PRK08088 4-aminobutyrate amino 99.9 3.9E-22 8.4E-27 192.4 26.1 343 34-409 41-424 (425)
168 PLN03227 serine palmitoyltrans 99.9 3.4E-22 7.4E-27 190.4 25.2 330 37-409 1-383 (392)
169 PRK13520 L-tyrosine decarboxyl 99.9 3.5E-22 7.5E-27 190.4 24.6 319 54-407 33-370 (371)
170 PRK13393 5-aminolevulinate syn 99.9 1.6E-21 3.5E-26 187.6 28.7 329 34-409 45-397 (406)
171 COG0156 BioF 7-keto-8-aminopel 99.9 1.2E-21 2.5E-26 181.8 26.3 324 34-405 39-387 (388)
172 TIGR01437 selA_rel uncharacter 99.9 1.5E-21 3.3E-26 184.2 25.7 315 34-406 8-363 (363)
173 PRK00011 glyA serine hydroxyme 99.9 1.9E-21 4E-26 188.0 26.6 323 34-408 25-389 (416)
174 cd06450 DOPA_deC_like DOPA dec 99.9 2.9E-22 6.3E-27 189.1 19.9 299 54-404 12-344 (345)
175 TIGR02006 IscS cysteine desulf 99.9 4E-22 8.7E-27 191.5 20.5 323 43-408 5-377 (402)
176 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.1E-21 2.3E-26 187.4 21.9 321 45-404 3-375 (376)
177 PRK06234 methionine gamma-lyas 99.9 9.7E-21 2.1E-25 180.8 28.1 217 75-343 62-285 (400)
178 PRK00854 rocD ornithine--oxo-a 99.9 7.2E-21 1.6E-25 183.0 27.2 327 34-407 41-400 (401)
179 PLN00144 acetylornithine trans 99.9 7.3E-21 1.6E-25 180.6 26.3 333 34-409 15-381 (382)
180 PRK08247 cystathionine gamma-s 99.9 1.1E-20 2.5E-25 178.6 27.3 277 71-409 47-365 (366)
181 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.9E-21 6.2E-26 184.2 23.0 318 54-405 33-373 (373)
182 PRK05937 8-amino-7-oxononanoat 99.9 1.4E-20 3.1E-25 178.7 25.7 324 34-409 4-351 (370)
183 PTZ00125 ornithine aminotransf 99.9 1.8E-20 3.9E-25 180.3 26.6 337 34-409 31-396 (400)
184 TIGR03246 arg_catab_astC succi 99.9 9.6E-21 2.1E-25 181.3 24.4 327 34-409 35-396 (397)
185 PRK07504 O-succinylhomoserine 99.9 3.1E-20 6.7E-25 177.0 26.7 219 71-343 60-283 (398)
186 PRK14012 cysteine desulfurase; 99.9 6E-21 1.3E-25 183.6 21.3 324 43-409 5-380 (404)
187 TIGR00700 GABAtrnsam 4-aminobu 99.9 4.2E-20 9E-25 178.0 26.2 338 34-407 33-419 (420)
188 COG0075 Serine-pyruvate aminot 99.9 1.6E-19 3.5E-24 165.9 27.9 322 49-409 12-364 (383)
189 PRK00451 glycine dehydrogenase 99.9 1.2E-20 2.7E-25 183.8 22.0 320 35-406 69-446 (447)
190 PRK00062 glutamate-1-semialdeh 99.9 3.5E-20 7.6E-25 178.7 24.7 338 33-409 49-425 (426)
191 COG4992 ArgD Ornithine/acetylo 99.9 1.1E-19 2.4E-24 165.4 26.1 327 33-409 41-399 (404)
192 PLN02624 ornithine-delta-amino 99.9 1.3E-19 2.8E-24 176.4 28.5 332 34-408 75-444 (474)
193 PLN02955 8-amino-7-oxononanoat 99.9 5.7E-20 1.2E-24 174.4 25.2 320 34-408 102-461 (476)
194 PRK09792 4-aminobutyrate trans 99.9 7.6E-20 1.7E-24 175.8 26.4 334 34-407 40-420 (421)
195 PRK06767 methionine gamma-lyas 99.9 1.4E-19 3E-24 172.2 27.6 216 75-343 59-279 (386)
196 PRK07582 cystathionine gamma-l 99.9 5.6E-20 1.2E-24 173.6 23.7 276 71-408 46-365 (366)
197 PRK06918 4-aminobutyrate amino 99.9 2E-19 4.4E-24 174.6 27.9 340 34-409 54-444 (451)
198 TIGR01885 Orn_aminotrans ornit 99.9 2.7E-19 5.8E-24 171.9 28.4 330 34-407 37-401 (401)
199 PRK06460 hypothetical protein; 99.9 8.7E-20 1.9E-24 172.8 24.4 215 75-343 43-262 (376)
200 PRK08249 cystathionine gamma-s 99.9 1.2E-19 2.6E-24 172.8 25.3 216 75-343 62-281 (398)
201 TIGR02080 O_succ_thio_ly O-suc 99.9 2.5E-19 5.5E-24 169.7 26.7 222 71-343 46-269 (382)
202 PRK06777 4-aminobutyrate amino 99.9 1.5E-19 3.3E-24 173.7 25.4 340 34-407 40-420 (421)
203 PRK08133 O-succinylhomoserine 99.9 2E-19 4.4E-24 171.1 25.9 214 76-342 60-277 (390)
204 PRK08045 cystathionine gamma-s 99.9 2.4E-19 5.1E-24 170.0 25.9 219 71-343 47-270 (386)
205 PRK04612 argD acetylornithine 99.9 2E-19 4.3E-24 171.8 25.4 338 34-409 40-404 (408)
206 PRK08776 cystathionine gamma-s 99.9 1.9E-19 4.1E-24 171.6 25.0 219 71-343 55-278 (405)
207 PRK07505 hypothetical protein; 99.9 2.4E-19 5.2E-24 172.3 25.9 319 34-408 46-399 (402)
208 PRK08360 4-aminobutyrate amino 99.9 2.5E-19 5.3E-24 172.8 25.8 340 34-409 41-427 (443)
209 TIGR03235 DNA_S_dndA cysteine 99.9 2.6E-20 5.6E-25 176.2 18.1 295 45-382 2-321 (353)
210 TIGR01328 met_gam_lyase methio 99.8 4.2E-19 9.1E-24 168.9 25.5 218 75-343 57-278 (391)
211 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1E-18 2.2E-23 166.1 27.7 192 53-282 12-205 (379)
212 PRK07811 cystathionine gamma-s 99.8 6.3E-19 1.4E-23 167.7 25.7 216 75-343 59-279 (388)
213 PLN02651 cysteine desulfurase 99.8 1.9E-19 4.2E-24 170.8 22.2 260 44-341 2-277 (364)
214 cd00614 CGS_like CGS_like: Cys 99.8 8.5E-19 1.8E-23 166.2 26.5 216 75-343 38-258 (369)
215 TIGR02379 ECA_wecE TDP-4-keto- 99.8 9E-19 2E-23 165.7 26.3 197 51-284 7-207 (376)
216 PF00266 Aminotran_5: Aminotra 99.8 4.8E-19 1.1E-23 168.6 23.3 315 44-398 2-371 (371)
217 PRK07503 methionine gamma-lyas 99.8 1.1E-18 2.5E-23 166.6 24.7 217 75-343 63-284 (403)
218 COG0160 GabT 4-aminobutyrate a 99.8 1.2E-18 2.6E-23 163.4 24.1 341 34-409 56-446 (447)
219 PRK08117 4-aminobutyrate amino 99.8 9.5E-19 2.1E-23 169.4 24.3 341 34-409 43-430 (433)
220 PRK08574 cystathionine gamma-s 99.8 2.1E-18 4.5E-23 163.6 25.9 216 75-343 51-270 (385)
221 PRK07050 cystathionine beta-ly 99.8 3E-18 6.5E-23 163.1 26.9 173 71-282 60-237 (394)
222 PRK07810 O-succinylhomoserine 99.8 1.8E-18 3.8E-23 165.0 25.2 218 71-343 65-288 (403)
223 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.7E-18 3.7E-23 164.5 25.0 219 71-343 49-271 (380)
224 PRK08861 cystathionine gamma-s 99.8 2.9E-18 6.4E-23 162.0 25.4 219 71-343 48-271 (388)
225 PRK07495 4-aminobutyrate amino 99.8 2.5E-18 5.5E-23 165.1 24.8 338 34-409 40-422 (425)
226 PRK04366 glycine dehydrogenase 99.8 2.2E-18 4.9E-23 168.2 24.7 319 54-408 83-448 (481)
227 PRK09028 cystathionine beta-ly 99.8 9E-18 2E-22 158.5 26.5 219 71-343 53-278 (394)
228 PRK07269 cystathionine gamma-s 99.8 7.1E-18 1.5E-22 158.7 25.0 280 71-407 49-363 (364)
229 PRK05964 adenosylmethionine--8 99.8 6.3E-18 1.4E-22 163.1 25.3 344 34-409 42-423 (423)
230 PRK08248 O-acetylhomoserine am 99.8 6.8E-18 1.5E-22 161.9 25.0 158 76-269 63-224 (431)
231 PRK08064 cystathionine beta-ly 99.8 8.6E-18 1.9E-22 160.0 24.5 167 77-282 54-225 (390)
232 TIGR03588 PseC UDP-4-keto-6-de 99.8 2E-17 4.3E-22 157.9 25.9 199 51-282 6-208 (380)
233 cd00615 Orn_deC_like Ornithine 99.8 6.6E-19 1.4E-23 161.8 15.1 174 71-268 53-231 (294)
234 PRK05939 hypothetical protein; 99.8 2.7E-17 5.9E-22 156.4 26.4 155 79-269 49-206 (397)
235 COG0399 WecE Predicted pyridox 99.8 3.8E-17 8.3E-22 150.6 26.2 196 53-285 13-210 (374)
236 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.9E-17 4.1E-22 157.5 25.0 195 53-283 9-205 (375)
237 PRK06058 4-aminobutyrate amino 99.8 1.7E-17 3.7E-22 160.6 25.0 341 34-409 56-443 (443)
238 PRK13034 serine hydroxymethylt 99.8 2.5E-17 5.3E-22 158.2 25.7 324 34-408 28-392 (416)
239 COG2008 GLY1 Threonine aldolas 99.8 3.8E-17 8.2E-22 146.0 24.8 313 54-406 13-341 (342)
240 PRK05968 hypothetical protein; 99.8 3.2E-17 6.9E-22 156.1 26.0 214 76-343 62-280 (389)
241 TIGR02407 ectoine_ectB diamino 99.8 3.1E-17 6.8E-22 157.3 26.1 343 34-408 35-412 (412)
242 PRK03715 argD acetylornithine 99.8 3.8E-17 8.2E-22 155.8 26.3 336 34-409 36-394 (395)
243 COG0001 HemL Glutamate-1-semia 99.8 1.2E-17 2.6E-22 153.8 21.7 336 34-409 53-429 (432)
244 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.5E-17 5.5E-22 158.2 24.7 159 75-269 55-217 (418)
245 TIGR01329 cysta_beta_ly_E cyst 99.8 1.7E-17 3.7E-22 157.3 23.1 165 79-282 49-218 (378)
246 PLN02509 cystathionine beta-ly 99.8 4.7E-17 1E-21 156.4 26.4 221 71-343 125-350 (464)
247 PRK09264 diaminobutyrate--2-ox 99.8 1E-16 2.2E-21 154.6 27.9 345 34-408 39-416 (425)
248 PRK07671 cystathionine beta-ly 99.8 4.4E-17 9.6E-22 154.3 24.9 215 75-343 48-267 (377)
249 PRK15407 lipopolysaccharide bi 99.8 6.3E-17 1.4E-21 155.8 26.1 209 38-282 27-244 (438)
250 PLN02482 glutamate-1-semialdeh 99.8 5.6E-17 1.2E-21 156.8 24.9 337 34-409 99-474 (474)
251 TIGR01814 kynureninase kynuren 99.8 3.1E-17 6.8E-22 157.8 22.9 276 99-406 85-405 (406)
252 PRK06084 O-acetylhomoserine am 99.8 6.8E-17 1.5E-21 154.9 25.0 159 75-269 56-218 (425)
253 PRK06702 O-acetylhomoserine am 99.8 1.3E-16 2.8E-21 152.0 26.4 153 77-264 61-222 (432)
254 TIGR03372 putres_am_tran putre 99.8 5.2E-17 1.1E-21 155.9 23.7 328 34-406 75-442 (442)
255 TIGR01324 cysta_beta_ly_B cyst 99.8 1.9E-16 4.1E-21 149.6 27.0 166 78-282 51-221 (377)
256 cd00616 AHBA_syn 3-amino-5-hyd 99.8 3.8E-17 8.2E-22 154.6 22.3 280 75-403 16-352 (352)
257 PRK08593 4-aminobutyrate amino 99.8 1.5E-16 3.2E-21 153.8 26.6 339 34-409 42-430 (445)
258 TIGR03531 selenium_SpcS O-phos 99.8 5.1E-17 1.1E-21 154.5 22.8 216 102-342 125-344 (444)
259 PTZ00094 serine hydroxymethylt 99.8 5.1E-17 1.1E-21 158.0 23.3 328 34-407 34-407 (452)
260 PRK11522 putrescine--2-oxoglut 99.8 9.5E-17 2.1E-21 155.1 24.4 339 34-409 82-452 (459)
261 TIGR00709 dat 2,4-diaminobutyr 99.8 2.6E-16 5.5E-21 152.3 27.1 341 34-408 39-435 (442)
262 TIGR02618 tyr_phenol_ly tyrosi 99.8 2.5E-16 5.4E-21 147.8 25.7 319 55-408 50-426 (450)
263 PRK05967 cystathionine beta-ly 99.8 1.8E-16 4E-21 149.4 24.8 210 80-343 67-281 (395)
264 KOG1368 Threonine aldolase [Am 99.8 1.8E-16 3.8E-21 136.6 22.1 320 35-404 22-364 (384)
265 KOG1549 Cysteine desulfurase N 99.8 1E-16 2.2E-21 146.9 21.9 201 34-269 42-255 (428)
266 PRK12389 glutamate-1-semialdeh 99.8 2.4E-16 5.2E-21 152.0 25.3 338 34-409 53-428 (428)
267 PRK13580 serine hydroxymethylt 99.8 1.1E-16 2.3E-21 152.5 21.7 330 34-408 49-445 (493)
268 PRK06541 hypothetical protein; 99.8 5.3E-16 1.2E-20 150.3 26.3 343 34-409 52-456 (460)
269 PRK02769 histidine decarboxyla 99.8 7.4E-16 1.6E-20 145.4 26.3 296 79-408 63-372 (380)
270 PRK06176 cystathionine gamma-s 99.8 3.5E-16 7.5E-21 148.3 24.1 167 77-281 50-220 (380)
271 PRK00615 glutamate-1-semialdeh 99.7 4.6E-16 1E-20 149.3 24.7 336 34-409 53-429 (433)
272 PRK05769 4-aminobutyrate amino 99.7 7.8E-16 1.7E-20 148.6 25.7 339 34-409 54-440 (441)
273 KOG1360 5-aminolevulinate synt 99.7 4E-16 8.7E-21 139.4 21.1 343 21-409 158-525 (570)
274 PRK06062 hypothetical protein; 99.7 1.1E-15 2.4E-20 147.9 25.0 338 34-409 53-446 (451)
275 PRK13237 tyrosine phenol-lyase 99.7 1.9E-15 4E-20 142.3 25.1 305 71-408 72-433 (460)
276 COG0112 GlyA Glycine/serine hy 99.7 2.4E-15 5.3E-20 135.3 24.1 326 35-408 27-390 (413)
277 PF01041 DegT_DnrJ_EryC1: DegT 99.7 3.7E-16 8E-21 148.0 20.0 193 54-282 4-198 (363)
278 PRK05639 4-aminobutyrate amino 99.7 2E-15 4.2E-20 146.1 24.8 336 34-408 53-443 (457)
279 KOG1359 Glycine C-acetyltransf 99.7 6.8E-16 1.5E-20 132.7 18.2 325 33-408 66-412 (417)
280 PRK07482 hypothetical protein; 99.7 5.2E-15 1.1E-19 143.6 26.8 340 34-408 50-454 (461)
281 PRK05965 hypothetical protein; 99.7 5.1E-15 1.1E-19 143.6 26.1 340 34-409 46-448 (459)
282 PLN03226 serine hydroxymethylt 99.7 4.1E-15 8.9E-20 144.1 25.2 328 34-407 34-418 (475)
283 PRK07678 aminotransferase; Val 99.7 4.9E-15 1.1E-19 143.5 25.5 336 34-409 47-450 (451)
284 PRK06943 adenosylmethionine--8 99.7 6.1E-15 1.3E-19 142.7 26.1 340 34-409 54-447 (453)
285 PRK07046 aminotransferase; Val 99.7 6.8E-15 1.5E-19 142.2 25.9 331 34-409 75-451 (453)
286 PRK05994 O-acetylhomoserine am 99.7 6.4E-15 1.4E-19 141.7 25.5 157 77-269 63-223 (427)
287 PRK07481 hypothetical protein; 99.7 7.5E-15 1.6E-19 142.1 26.0 342 34-409 42-446 (449)
288 PLN02271 serine hydroxymethylt 99.7 1.5E-14 3.3E-19 138.3 27.4 332 35-407 149-539 (586)
289 PRK06916 adenosylmethionine--8 99.7 6.5E-15 1.4E-19 142.9 25.4 340 34-409 56-456 (460)
290 PRK13360 omega amino acid--pyr 99.7 8.1E-15 1.7E-19 141.5 25.6 340 34-409 46-441 (442)
291 PRK07986 adenosylmethionine--8 99.7 3.7E-15 8E-20 143.0 22.7 342 34-408 43-423 (428)
292 PRK06173 adenosylmethionine--8 99.7 1.2E-14 2.6E-19 139.7 26.1 339 34-408 44-425 (429)
293 PRK07036 hypothetical protein; 99.7 1.1E-14 2.4E-19 141.4 26.0 340 34-408 51-452 (466)
294 PLN03032 serine decarboxylase; 99.7 1.1E-14 2.5E-19 136.3 25.1 298 79-405 64-373 (374)
295 PRK07030 adenosylmethionine--8 99.7 7E-15 1.5E-19 142.7 24.5 339 34-409 47-447 (466)
296 PLN02760 4-aminobutyrate:pyruv 99.7 9.2E-15 2E-19 142.8 25.4 341 34-409 89-492 (504)
297 TIGR01788 Glu-decarb-GAD gluta 99.7 5.2E-15 1.1E-19 141.5 22.7 335 51-409 51-430 (431)
298 PRK09221 beta alanine--pyruvat 99.7 1.4E-14 3.1E-19 139.9 26.1 343 34-409 49-444 (445)
299 PRK08134 O-acetylhomoserine am 99.7 9.2E-15 2E-19 140.4 24.3 157 77-269 64-224 (433)
300 cd01494 AAT_I Aspartate aminot 99.7 5.9E-16 1.3E-20 130.3 13.4 167 79-269 2-169 (170)
301 cd00611 PSAT_like Phosphoserin 99.7 3.7E-15 7.9E-20 140.6 20.0 312 49-405 6-353 (355)
302 TIGR01364 serC_1 phosphoserine 99.7 9.4E-15 2E-19 136.9 22.5 310 53-408 3-348 (349)
303 PRK07812 O-acetylhomoserine am 99.7 1.4E-14 3E-19 138.9 24.1 158 77-269 69-230 (436)
304 PRK08742 adenosylmethionine--8 99.7 2E-14 4.3E-19 139.5 25.3 341 34-409 64-468 (472)
305 PRK12403 putative aminotransfe 99.7 2.1E-14 4.6E-19 139.3 25.6 341 34-409 54-453 (460)
306 PRK06105 aminotransferase; Pro 99.7 2.3E-14 4.9E-19 139.1 25.6 340 34-409 48-450 (460)
307 TIGR00508 bioA adenosylmethion 99.7 6.2E-14 1.3E-18 135.0 27.4 341 34-408 45-426 (427)
308 PRK04013 argD acetylornithine/ 99.7 5.8E-14 1.2E-18 131.8 26.5 316 34-409 24-361 (364)
309 KOG2862 Alanine-glyoxylate ami 99.7 5.2E-14 1.1E-18 122.2 23.8 322 49-409 24-383 (385)
310 PRK06082 4-aminobutyrate amino 99.7 5.4E-14 1.2E-18 136.3 26.9 334 34-409 72-452 (459)
311 PRK06148 hypothetical protein; 99.7 1.9E-14 4.1E-19 151.6 25.3 337 34-409 624-1011(1013)
312 PRK05355 3-phosphoserine/phosp 99.7 9.6E-15 2.1E-19 137.5 20.4 316 49-408 10-358 (360)
313 PRK06149 hypothetical protein; 99.7 2.1E-14 4.6E-19 151.2 25.2 336 34-408 585-970 (972)
314 PRK06917 hypothetical protein; 99.7 4.8E-14 1E-18 136.4 25.4 342 34-408 31-437 (447)
315 PF00464 SHMT: Serine hydroxym 99.7 5.8E-15 1.3E-19 137.6 18.2 324 35-402 21-399 (399)
316 PRK05630 adenosylmethionine--8 99.7 4.3E-14 9.3E-19 135.7 24.7 337 34-409 40-421 (422)
317 PRK03080 phosphoserine aminotr 99.7 1.3E-14 2.8E-19 138.0 20.9 308 53-409 23-374 (378)
318 PRK08114 cystathionine beta-ly 99.7 4.7E-14 1E-18 133.0 24.4 214 76-343 61-281 (395)
319 PRK07480 putative aminotransfe 99.7 4.9E-14 1.1E-18 136.5 25.1 340 34-409 50-449 (456)
320 COG1103 Archaea-specific pyrid 99.7 6.4E-14 1.4E-18 119.4 22.5 321 53-409 29-381 (382)
321 PRK06938 diaminobutyrate--2-ox 99.7 4.6E-14 9.9E-19 136.9 24.7 341 34-409 63-461 (464)
322 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 3.9E-14 8.5E-19 133.3 23.0 216 76-343 54-275 (386)
323 PRK07483 hypothetical protein; 99.6 5.9E-14 1.3E-18 135.6 24.7 341 34-409 30-438 (443)
324 COG0626 MetC Cystathionine bet 99.6 1.3E-13 2.8E-18 128.2 25.7 280 76-409 62-395 (396)
325 COG0161 BioA Adenosylmethionin 99.6 4.7E-14 1E-18 131.9 22.4 343 34-408 44-443 (449)
326 PLN02724 Molybdenum cofactor s 99.6 1.9E-14 4.2E-19 148.8 22.0 334 43-406 36-486 (805)
327 PRK05613 O-acetylhomoserine am 99.6 1.1E-13 2.4E-18 132.8 25.0 158 77-269 69-230 (437)
328 PRK06931 diaminobutyrate--2-ox 99.6 1.3E-13 2.8E-18 133.7 24.9 339 34-408 58-454 (459)
329 PRK04311 selenocysteine syntha 99.6 4.2E-13 9.2E-18 129.2 26.5 343 34-407 79-463 (464)
330 PRK08297 L-lysine aminotransfe 99.6 3.2E-13 7E-18 130.5 25.4 337 33-409 44-442 (443)
331 PF01212 Beta_elim_lyase: Beta 99.6 3.2E-15 6.8E-20 135.4 10.4 252 54-343 8-271 (290)
332 PRK06434 cystathionine gamma-l 99.6 3.8E-13 8.2E-18 127.0 24.6 274 75-408 62-384 (384)
333 KOG1401 Acetylornithine aminot 99.6 7.4E-13 1.6E-17 119.6 24.6 341 34-409 56-431 (433)
334 PRK06209 glutamate-1-semialdeh 99.6 3.6E-13 7.8E-18 130.0 24.0 324 34-409 48-406 (431)
335 PF04864 Alliinase_C: Allinase 99.6 7.9E-15 1.7E-19 130.2 10.9 287 79-405 45-362 (363)
336 KOG1404 Alanine-glyoxylate ami 99.6 3.3E-13 7.3E-18 120.9 21.0 333 34-402 50-432 (442)
337 PLN02414 glycine dehydrogenase 99.6 1.3E-13 2.8E-18 142.2 21.0 299 71-408 555-907 (993)
338 TIGR01366 serC_3 phosphoserine 99.6 6E-13 1.3E-17 125.6 23.4 313 49-409 10-361 (361)
339 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 3.4E-14 7.4E-19 133.1 14.1 214 72-307 61-291 (417)
340 PLN02263 serine decarboxylase 99.6 3E-12 6.4E-17 122.0 27.3 299 78-407 130-442 (470)
341 KOG0053 Cystathionine beta-lya 99.6 7.8E-13 1.7E-17 121.4 21.9 171 76-283 76-250 (409)
342 PRK15029 arginine decarboxylas 99.5 7.1E-13 1.5E-17 133.1 21.7 218 71-309 199-440 (755)
343 TIGR00474 selA seryl-tRNA(sec) 99.5 2.2E-12 4.7E-17 124.0 24.2 218 35-280 75-308 (454)
344 TIGR00699 GABAtrns_euk 4-amino 99.5 1.9E-12 4E-17 124.8 22.4 335 34-406 58-464 (464)
345 KOG1357 Serine palmitoyltransf 99.5 1.8E-13 4E-18 124.6 14.2 330 35-406 137-500 (519)
346 PLN02590 probable tyrosine dec 99.5 2.2E-11 4.7E-16 119.1 29.0 333 55-408 145-532 (539)
347 TIGR03251 LAT_fam L-lysine 6-t 99.5 2.7E-12 5.9E-17 123.9 22.3 334 33-405 37-431 (431)
348 PLN02880 tyrosine decarboxylas 99.5 8.5E-12 1.8E-16 121.8 25.8 330 55-408 97-484 (490)
349 COG2873 MET17 O-acetylhomoseri 99.5 1.6E-11 3.5E-16 109.8 23.1 165 75-275 60-228 (426)
350 COG0076 GadB Glutamate decarbo 99.5 9E-12 1.9E-16 119.7 21.7 274 49-343 70-362 (460)
351 TIGR01365 serC_2 phosphoserine 99.5 1.4E-11 3E-16 115.6 22.1 304 54-408 15-373 (374)
352 TIGR02617 tnaA_trp_ase tryptop 99.5 3E-11 6.5E-16 112.8 23.5 333 36-408 43-441 (467)
353 PRK15399 lysine decarboxylase 99.4 7.5E-11 1.6E-15 117.5 23.9 213 75-309 193-418 (713)
354 PRK15400 lysine decarboxylase 99.4 1.1E-11 2.4E-16 123.3 18.1 213 75-309 193-418 (714)
355 PRK13578 ornithine decarboxyla 99.4 5.2E-11 1.1E-15 118.7 21.1 213 75-309 172-414 (720)
356 PLN02974 adenosylmethionine-8- 99.4 3.9E-10 8.4E-15 115.3 27.4 220 168-406 567-816 (817)
357 TIGR00461 gcvP glycine dehydro 99.4 1.2E-10 2.6E-15 119.0 23.5 299 71-408 517-867 (939)
358 PF00202 Aminotran_3: Aminotra 99.4 1.6E-11 3.4E-16 114.9 14.8 222 34-276 16-263 (339)
359 PRK12566 glycine dehydrogenase 99.4 1.1E-10 2.4E-15 118.7 21.7 301 71-408 530-876 (954)
360 TIGR03799 NOD_PanD_pyr putativ 99.4 2.5E-10 5.5E-15 111.8 23.6 249 71-343 119-420 (522)
361 PRK05367 glycine dehydrogenase 99.4 1E-10 2.3E-15 121.4 22.0 302 71-408 529-875 (954)
362 KOG1403 Predicted alanine-glyo 99.3 4.3E-11 9.3E-16 103.7 14.5 319 54-408 63-437 (452)
363 KOG1402 Ornithine aminotransfe 99.3 3.1E-10 6.7E-15 99.8 19.0 309 54-407 77-426 (427)
364 PLN02452 phosphoserine transam 99.3 1.3E-09 2.9E-14 102.3 24.0 319 35-408 7-363 (365)
365 PRK12462 phosphoserine aminotr 99.3 5.9E-10 1.3E-14 103.6 19.6 313 49-408 11-362 (364)
366 PF06838 Met_gamma_lyase: Meth 99.2 5.1E-10 1.1E-14 100.6 16.8 203 54-284 26-249 (403)
367 COG1982 LdcC Arginine/lysine/o 99.2 2.4E-09 5.1E-14 102.7 22.1 188 75-287 68-263 (557)
368 PRK05367 glycine dehydrogenase 99.2 1.4E-09 3.1E-14 113.1 19.1 311 39-403 81-437 (954)
369 KOG1358 Serine palmitoyltransf 99.1 6E-10 1.3E-14 100.2 12.4 328 34-408 94-465 (467)
370 COG3033 TnaA Tryptophanase [Am 99.1 4.9E-08 1.1E-12 87.2 24.2 331 46-408 53-444 (471)
371 PF00282 Pyridoxal_deC: Pyrido 99.1 5.6E-09 1.2E-13 98.7 19.7 269 55-343 54-355 (373)
372 PLN02414 glycine dehydrogenase 99.1 1.1E-08 2.4E-13 106.1 20.3 315 39-404 108-465 (993)
373 PLN02994 1-aminocyclopropane-1 99.0 5E-10 1.1E-14 91.2 6.8 66 71-140 86-153 (153)
374 KOG1383 Glutamate decarboxylas 99.0 6.4E-08 1.4E-12 89.5 20.5 361 16-409 61-447 (491)
375 KOG2467 Glycine/serine hydroxy 98.9 1E-06 2.3E-11 79.1 22.3 334 35-406 41-424 (477)
376 COG1003 GcvP Glycine cleavage 98.9 3.6E-07 7.8E-12 83.9 19.6 141 70-223 95-244 (496)
377 TIGR03811 tyr_de_CO2_Ent tyros 98.8 4.1E-06 8.9E-11 83.3 27.1 166 54-226 96-326 (608)
378 COG1921 SelA Selenocysteine sy 98.8 1.6E-06 3.4E-11 80.0 20.4 233 35-300 21-261 (395)
379 COG3844 Kynureninase [Amino ac 98.7 6.7E-06 1.5E-10 73.0 21.1 297 78-409 73-403 (407)
380 COG0403 GcvP Glycine cleavage 98.7 8E-06 1.7E-10 75.3 20.9 317 39-405 80-447 (450)
381 COG4100 Cystathionine beta-lya 98.7 4.8E-07 1E-11 79.1 12.3 195 54-279 37-255 (416)
382 TIGR00461 gcvP glycine dehydro 98.6 2.9E-06 6.3E-11 87.5 19.9 308 40-403 70-426 (939)
383 PF02347 GDC-P: Glycine cleava 98.6 2.8E-06 6E-11 80.3 16.3 252 108-402 133-429 (429)
384 PF05889 SLA_LP_auto_ag: Solub 98.6 2.3E-06 5.1E-11 78.9 15.2 146 127-282 100-247 (389)
385 KOG1405 4-aminobutyrate aminot 98.4 1E-05 2.2E-10 72.6 13.9 211 166-408 254-483 (484)
386 PF03841 SelA: L-seryl-tRNA se 98.4 2.8E-07 6.1E-12 84.2 4.2 209 46-282 11-235 (367)
387 KOG0629 Glutamate decarboxylas 98.1 0.00035 7.5E-09 64.5 16.5 150 108-267 165-332 (510)
388 COG1932 SerC Phosphoserine ami 98.0 0.0006 1.3E-08 62.1 16.5 168 214-409 171-364 (365)
389 PRK12566 glycine dehydrogenase 98.0 0.0013 2.8E-08 68.2 20.9 307 38-402 83-438 (954)
390 KOG0628 Aromatic-L-amino-acid/ 97.7 0.00084 1.8E-08 62.7 13.8 90 133-227 187-279 (511)
391 KOG3843 Predicted serine hydro 96.8 0.043 9.3E-07 47.9 12.6 107 146-260 121-230 (432)
392 KOG2040 Glycine dehydrogenase 96.1 0.047 1E-06 53.6 10.2 144 70-223 568-720 (1001)
393 KOG3846 L-kynurenine hydrolase 95.9 1.2 2.7E-05 40.0 17.5 117 100-223 128-254 (465)
394 PLN02672 methionine S-methyltr 95.5 0.2 4.4E-06 53.6 12.9 202 62-280 411-623 (1082)
395 KOG2790 Phosphoserine aminotra 94.5 1 2.2E-05 40.1 12.0 170 210-409 172-369 (370)
396 KOG2040 Glycine dehydrogenase 91.0 19 0.00041 36.3 20.5 79 318-403 391-478 (1001)
397 COG0156 BioF 7-keto-8-aminopel 85.1 36 0.00078 32.5 14.3 158 71-251 47-207 (388)
398 COG0296 GlgB 1,4-alpha-glucan 81.1 1.9 4.1E-05 43.5 4.0 37 189-228 206-242 (628)
399 PLN02955 8-amino-7-oxononanoat 79.1 66 0.0014 31.7 13.7 160 71-252 110-286 (476)
400 cd06568 GH20_SpHex_like A subg 72.1 5.6 0.00012 37.1 4.4 69 142-217 24-92 (329)
401 cd02742 GH20_hexosaminidase Be 69.2 8.4 0.00018 35.5 4.9 68 142-217 22-89 (303)
402 TIGR03815 CpaE_hom_Actino heli 68.0 86 0.0019 29.1 11.4 134 77-221 73-213 (322)
403 cd06562 GH20_HexA_HexB-like Be 63.8 9.7 0.00021 35.9 4.2 64 142-217 24-87 (348)
404 KOG1209 1-Acyl dihydroxyaceton 61.7 56 0.0012 28.3 7.8 88 100-195 7-95 (289)
405 COG1105 FruK Fructose-1-phosph 61.6 83 0.0018 29.0 9.5 51 167-221 116-167 (310)
406 cd06570 GH20_chitobiase-like_1 60.8 10 0.00022 35.0 3.7 61 143-217 25-85 (311)
407 PLN03244 alpha-amylase; Provis 59.6 11 0.00025 39.0 4.0 41 188-228 429-469 (872)
408 PF14258 DUF4350: Domain of un 59.4 15 0.00033 25.1 3.6 35 179-219 35-70 (70)
409 TIGR01470 cysG_Nterm siroheme 57.6 1.2E+02 0.0026 26.1 9.5 94 100-221 9-103 (205)
410 TIGR02104 pulA_typeI pullulana 55.1 11 0.00024 38.5 3.2 35 189-226 221-255 (605)
411 cd06569 GH20_Sm-chitobiase-lik 53.1 22 0.00048 34.7 4.8 76 142-217 28-114 (445)
412 smart00642 Aamy Alpha-amylase 50.8 17 0.00036 30.2 3.0 28 199-226 69-96 (166)
413 COG0552 FtsY Signal recognitio 50.3 58 0.0013 30.2 6.6 108 108-221 146-268 (340)
414 PRK08535 translation initiatio 49.9 2E+02 0.0043 26.6 10.3 118 81-219 105-228 (310)
415 cd06563 GH20_chitobiase-like T 49.8 26 0.00057 33.1 4.6 76 143-218 25-104 (357)
416 KOG1465 Translation initiation 49.1 1.7E+02 0.0036 26.8 9.0 105 100-221 162-272 (353)
417 TIGR02402 trehalose_TreZ malto 49.0 21 0.00046 35.9 4.0 31 197-227 157-187 (542)
418 PF00728 Glyco_hydro_20: Glyco 48.1 11 0.00023 35.5 1.7 67 143-218 25-91 (351)
419 PF10087 DUF2325: Uncharacteri 46.7 86 0.0019 23.1 6.1 68 139-218 13-80 (97)
420 PF05687 DUF822: Plant protein 45.4 88 0.0019 25.0 5.9 19 365-383 48-66 (150)
421 COG2515 Acd 1-aminocyclopropan 44.2 1.8E+02 0.0039 26.7 8.5 105 103-212 66-178 (323)
422 PRK06372 translation initiatio 43.4 2.4E+02 0.0053 25.2 9.7 100 101-218 87-190 (253)
423 PLN02960 alpha-amylase 42.9 29 0.00062 36.7 3.9 37 192-228 458-494 (897)
424 TIGR00524 eIF-2B_rel eIF-2B al 42.5 2.7E+02 0.0059 25.6 9.9 80 129-219 153-237 (303)
425 TIGR00064 ftsY signal recognit 42.1 2.6E+02 0.0057 25.2 9.8 42 179-221 154-201 (272)
426 TIGR00511 ribulose_e2b2 ribose 42.1 2.8E+02 0.0061 25.5 10.5 118 80-218 99-222 (301)
427 PRK12313 glycogen branching en 41.8 33 0.00071 35.4 4.2 33 195-227 215-247 (633)
428 TIGR01515 branching_enzym alph 40.9 33 0.00071 35.2 4.0 33 195-227 201-233 (613)
429 COG0647 NagD Predicted sugar p 40.8 2.5E+02 0.0054 25.4 9.1 140 54-207 26-178 (269)
430 PLN02447 1,4-alpha-glucan-bran 40.6 33 0.00071 35.9 3.9 33 195-227 295-327 (758)
431 TIGR02012 tigrfam_recA protein 40.0 2.5E+02 0.0053 26.2 9.2 20 367-387 270-289 (321)
432 PRK09354 recA recombinase A; P 40.0 2.3E+02 0.005 26.7 9.0 91 126-218 86-192 (349)
433 COG1184 GCD2 Translation initi 39.6 3.1E+02 0.0066 25.3 10.0 102 100-218 119-226 (301)
434 TIGR03573 WbuX N-acetyl sugar 39.0 3.3E+02 0.0072 25.5 10.6 99 107-224 65-171 (343)
435 COG0816 Predicted endonuclease 38.6 80 0.0017 25.3 5.0 55 165-221 40-97 (141)
436 KOG1201 Hydroxysteroid 17-beta 38.1 2.9E+02 0.0062 25.3 8.9 103 98-208 36-144 (300)
437 PRK14706 glycogen branching en 37.8 34 0.00073 35.2 3.5 33 195-227 212-244 (639)
438 PRK11889 flhF flagellar biosyn 37.4 3.1E+02 0.0067 26.6 9.4 52 166-221 304-361 (436)
439 PF02662 FlpD: Methyl-viologen 36.7 1.2E+02 0.0026 23.7 5.7 59 151-214 30-91 (124)
440 PRK05402 glycogen branching en 36.6 43 0.00093 35.1 4.1 35 193-227 308-342 (726)
441 KOG3974 Predicted sugar kinase 36.0 89 0.0019 27.9 5.2 71 141-221 69-140 (306)
442 PF00128 Alpha-amylase: Alpha 35.8 22 0.00048 32.3 1.8 29 199-227 51-79 (316)
443 PRK05234 mgsA methylglyoxal sy 34.4 1.5E+02 0.0032 23.8 6.1 71 143-221 43-114 (142)
444 cd01422 MGS Methylglyoxal synt 34.4 1.4E+02 0.0031 22.8 5.8 66 144-217 39-105 (115)
445 COG1023 Gnd Predicted 6-phosph 34.2 3.4E+02 0.0073 24.2 10.3 101 166-288 49-153 (300)
446 PF01408 GFO_IDH_MocA: Oxidore 34.1 95 0.0021 23.5 4.9 69 137-218 50-118 (120)
447 PRK00109 Holliday junction res 33.3 1.7E+02 0.0036 23.3 6.2 58 165-224 41-101 (138)
448 cd06564 GH20_DspB_LnbB-like Gl 33.3 40 0.00087 31.4 3.0 26 192-217 74-99 (326)
449 PRK04296 thymidine kinase; Pro 33.3 2.9E+02 0.0064 23.2 12.2 111 125-251 27-140 (190)
450 COG0031 CysK Cysteine synthase 33.2 2.1E+02 0.0046 26.2 7.5 47 108-157 68-116 (300)
451 PRK14705 glycogen branching en 33.1 48 0.001 36.7 3.9 35 192-226 807-841 (1224)
452 PF05368 NmrA: NmrA-like famil 32.2 3.3E+02 0.0072 23.4 8.7 62 143-218 38-99 (233)
453 KOG1467 Translation initiation 31.9 3.1E+02 0.0066 27.0 8.4 41 180-220 428-468 (556)
454 KOG2741 Dimeric dihydrodiol de 31.4 1.3E+02 0.0028 28.1 5.7 77 136-226 59-135 (351)
455 COG1648 CysG Siroheme synthase 31.3 3.5E+02 0.0075 23.4 15.4 88 100-216 12-100 (210)
456 TIGR02102 pullulan_Gpos pullul 30.7 51 0.0011 36.2 3.6 28 199-226 554-581 (1111)
457 PF03652 UPF0081: Uncharacteri 30.4 81 0.0018 25.0 3.9 61 162-224 35-99 (135)
458 PRK09441 cytoplasmic alpha-amy 29.8 61 0.0013 32.1 3.8 28 199-226 80-107 (479)
459 PF08672 APC2: Anaphase promot 29.0 45 0.00097 22.3 1.8 34 189-222 25-58 (60)
460 PRK12568 glycogen branching en 28.4 62 0.0013 33.8 3.6 32 196-227 315-346 (730)
461 PF03460 NIR_SIR_ferr: Nitrite 27.2 25 0.00054 23.9 0.4 24 190-214 15-38 (69)
462 PF04016 DUF364: Domain of unk 26.9 1.4E+02 0.0031 24.1 4.8 67 102-176 64-130 (147)
463 PRK04148 hypothetical protein; 26.8 3.3E+02 0.0071 21.7 7.5 20 199-218 88-107 (134)
464 cd00953 KDG_aldolase KDG (2-ke 26.6 4.1E+02 0.0088 24.0 8.3 33 184-220 125-158 (279)
465 KOG4132 Uroporphyrinogen III s 26.3 81 0.0018 27.4 3.3 50 137-189 15-64 (260)
466 PRK05703 flhF flagellar biosyn 26.1 6.2E+02 0.013 24.6 10.0 52 166-221 286-341 (424)
467 cd00983 recA RecA is a bacter 25.8 5.5E+02 0.012 24.0 9.0 29 127-155 82-110 (325)
468 CHL00200 trpA tryptophan synth 25.7 4.9E+02 0.011 23.4 8.4 81 129-217 121-206 (263)
469 PRK08265 short chain dehydroge 25.5 4.6E+02 0.0099 23.0 8.5 48 108-157 11-59 (261)
470 PLN00196 alpha-amylase; Provis 25.4 65 0.0014 31.4 3.0 29 198-226 90-118 (428)
471 PRK12723 flagellar biosynthesi 25.3 6.1E+02 0.013 24.3 11.2 53 166-223 241-298 (388)
472 KOG2865 NADH:ubiquinone oxidor 25.2 5.4E+02 0.012 23.7 9.3 105 101-217 61-172 (391)
473 COG1204 Superfamily II helicas 25.1 2.4E+02 0.0052 29.9 7.2 54 101-155 48-109 (766)
474 KOG2774 NAD dependent epimeras 24.6 4.9E+02 0.011 23.0 8.3 73 141-227 93-165 (366)
475 TIGR02100 glgX_debranch glycog 24.4 79 0.0017 32.9 3.6 30 198-227 243-272 (688)
476 PRK13760 putative RNA-associat 24.2 2.5E+02 0.0055 24.7 6.1 66 301-382 74-139 (231)
477 TIGR03793 TOMM_pelo TOMM prope 24.2 1.3E+02 0.0029 21.2 3.6 24 180-206 52-75 (77)
478 PF04019 DUF359: Protein of un 24.0 2.8E+02 0.006 21.6 5.7 31 190-221 40-71 (121)
479 PF01008 IF-2B: Initiation fac 23.9 2.6E+02 0.0057 25.2 6.6 121 79-219 90-216 (282)
480 TIGR00291 RNA_SBDS rRNA metabo 23.8 2.5E+02 0.0055 24.7 6.0 66 301-382 74-139 (231)
481 PRK11557 putative DNA-binding 23.4 4.5E+02 0.0097 23.6 8.0 34 178-218 174-207 (278)
482 COG0352 ThiE Thiamine monophos 23.3 1.3E+02 0.0028 26.0 4.1 50 167-221 24-73 (211)
483 cd05013 SIS_RpiR RpiR-like pro 23.3 3.4E+02 0.0073 20.7 6.5 32 179-217 60-91 (139)
484 PF14097 SpoVAE: Stage V sporu 23.3 2.5E+02 0.0054 23.3 5.4 80 181-267 25-106 (180)
485 TIGR00250 RNAse_H_YqgF RNAse H 23.3 3.1E+02 0.0068 21.5 6.0 58 164-223 34-94 (130)
486 COG1088 RfbB dTDP-D-glucose 4, 23.3 3.3E+02 0.0072 25.1 6.7 106 109-228 6-136 (340)
487 PRK10785 maltodextrin glucosid 22.9 78 0.0017 32.4 3.2 31 197-227 223-253 (598)
488 TIGR03849 arch_ComA phosphosul 22.8 1.4E+02 0.0031 26.3 4.3 54 165-221 9-62 (237)
489 PRK06483 dihydromonapterin red 22.7 4.9E+02 0.011 22.3 8.5 27 108-136 7-34 (236)
490 PF02571 CbiJ: Precorrin-6x re 22.7 5.5E+02 0.012 22.8 8.7 93 102-216 2-96 (249)
491 COG2102 Predicted ATPases of P 22.6 5.2E+02 0.011 22.6 8.4 103 103-218 4-117 (223)
492 PRK06988 putative formyltransf 22.5 5.3E+02 0.011 23.8 8.3 76 166-257 14-90 (312)
493 COG2257 Uncharacterized homolo 22.5 70 0.0015 23.2 1.9 22 200-221 32-53 (92)
494 PLN00191 enolase 22.5 5.9E+02 0.013 25.1 8.9 84 129-220 312-395 (457)
495 COG1909 Uncharacterized protei 22.2 2.9E+02 0.0063 22.7 5.6 32 189-221 84-116 (167)
496 PF00154 RecA: recA bacterial 22.0 2.5E+02 0.0055 26.1 6.0 67 110-176 62-129 (322)
497 TIGR01460 HAD-SF-IIA Haloacid 22.0 4.1E+02 0.0089 23.2 7.3 86 55-151 17-102 (236)
498 COG0673 MviM Predicted dehydro 22.0 2.8E+02 0.006 25.7 6.6 74 137-223 55-128 (342)
499 TIGR00649 MG423 conserved hypo 21.9 7.3E+02 0.016 24.0 9.9 74 127-214 318-401 (422)
500 PF03786 UxuA: D-mannonate deh 21.7 1.3E+02 0.0027 28.4 4.0 39 180-218 25-63 (351)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-61 Score=427.93 Aligned_cols=395 Identities=53% Similarity=0.915 Sum_probs=375.7
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
|+.+.+.|+|||+.+..+|++++.+.+|||++|.|.|+.|.+++.+.|++|.+..........|.|..|.++++++++++
T Consensus 2 F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~l 81 (396)
T COG1448 2 FEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKL 81 (396)
T ss_pred ccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999998887766668899999999999999999
Q ss_pred hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283 90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169 (410)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 169 (410)
+.+....-+..+++..++|.|||||+.+++.++..+.+..+|++++|+|++|..+++..|.++..+|+.+.++..+|++.
T Consensus 82 lFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~ 161 (396)
T COG1448 82 LFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDG 161 (396)
T ss_pred hcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHH
Confidence 98876666778899999999999999999999999889899999999999999999999999999999998888999999
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+.+.+++.+.+.++++++++|||||..++.++|++|+++.++.+++.+.|-||++|+.+ .+.|.+.++.++......++
T Consensus 162 mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lv 240 (396)
T COG1448 162 MLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLV 240 (396)
T ss_pred HHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEE
Confidence 99999998889999999999999999999999999999999999999999999999988 88999999999888888999
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
..|+||.||+.|.|+|++.+++.+.+.+.++..++....+.+|++||.+++.+.+.+|++++++.+|++++..+++++.+
T Consensus 241 a~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~ 320 (396)
T COG1448 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILE 320 (396)
T ss_pred EehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l 406 (410)
.|+.+.+.|+ +.+-+.+++++..+.|+|.+.|++++++.+|.+++||+++.+||||++++++.+++.++++|.+++
T Consensus 321 mR~~lv~~L~-~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~ai~~v~ 396 (396)
T COG1448 321 MRQALVDALK-ALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAVL 396 (396)
T ss_pred HHHHHHHHHH-hhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHHHHhhC
Confidence 9999999999 877666789999999999999999999999999999999999999999999999999999998874
No 2
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.6e-56 Score=430.48 Aligned_cols=408 Identities=65% Similarity=1.083 Sum_probs=332.1
Q ss_pred CccceecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccH
Q 015283 1 MVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLA 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 80 (410)
|+++.-.|.|+++...+++++..+.+.++.+..+..++|+.|.+.+..++|.+.+.+.++....+..+...+|++..|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~ 94 (423)
T PLN02397 15 MAAAAASSRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLA 94 (423)
T ss_pred hhhhhhhhHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCH
Confidence 56666677799999999999999888888777778899999975466666655677888766554334435799999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC
Q 015283 81 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP 160 (410)
Q Consensus 81 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~ 160 (410)
+||+++++++.+......++++|...++.+|+++..++..++..+.|||+|++++|+|+.|...++..|++++.+++.++
T Consensus 95 ~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~ 174 (423)
T PLN02397 95 EFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDP 174 (423)
T ss_pred HHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccC
Confidence 99999999987665444444556555567777776665556666679999999999999999999999999999998545
Q ss_pred CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 161 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 161 ~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
+++++|++.+++.+.+..++++++++++||||||.+++.+++++|+++|++||++||+||+|.+|.+++...+..++..+
T Consensus 175 ~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~ 254 (423)
T PLN02397 175 KTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMF 254 (423)
T ss_pred cCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHH
Confidence 56889999998888653356788899999999999999999999999999999999999999999874211122333333
Q ss_pred hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 320 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 320 (410)
....+++|+++||||.|+++|||+||++++..+++.++++...+....+..+.+++.++|.++..+|+++++.+.|.+++
T Consensus 255 ~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~ 334 (423)
T PLN02397 255 VEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKEL 334 (423)
T ss_pred HhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 33445799999999999999999999864455677767777666666655566778889988899999887777787788
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHH
Q 015283 321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLAD 400 (410)
Q Consensus 321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~ 400 (410)
++.++.++++++.+.+.|+ +++....+.+..|++|+|+|++++.+++.+|++++||.+.++|||++++++.++++++++
T Consensus 335 ~~~~~~~~~rr~~l~~~L~-~~~~~~~~~~~~p~gg~fl~~~l~~~~~~~Ll~~~~V~v~~~~Ri~~~~~~~~~i~~~~~ 413 (423)
T PLN02397 335 KGMADRIISMRQKLYDALE-ARGSPGDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLAD 413 (423)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcCCCCCCCcccCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEeeCCHHHHHHHHH
Confidence 8999999999999999999 876322356678999999999998889999999999999999999998789999999999
Q ss_pred HHHHHhhhc
Q 015283 401 AIIDSYHNV 409 (410)
Q Consensus 401 ~l~~~l~~~ 409 (410)
+|++++.+.
T Consensus 414 ~i~~~~~~~ 422 (423)
T PLN02397 414 AIHAVVTNA 422 (423)
T ss_pred HHHHHHhcc
Confidence 999998753
No 3
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-55 Score=423.99 Aligned_cols=398 Identities=56% Similarity=0.985 Sum_probs=321.8
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
++++...+++++..+.+.++++.+++++||+.|.|.+..+.....+.+.+++.+.........|++..|.+++|+++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 84 (404)
T PTZ00376 5 FSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKL 84 (404)
T ss_pred hhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Confidence 77888888888888777777665578899999997333333333456666655544323347899999999999999999
Q ss_pred hcCCCCCcccCCceEEEecCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283 90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 168 (410)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 168 (410)
+.+..+..+++++|++.+|.|+++++.++..++. .+.+||+|++++|+|+.|...++..|++++.+++.+++++++|++
T Consensus 85 ~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~ 164 (404)
T PTZ00376 85 LFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFD 164 (404)
T ss_pred hcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHH
Confidence 8776666677889885458999999998865543 356999999999999999999999999999999855566899999
Q ss_pred hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283 169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248 (410)
Q Consensus 169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (410)
.+++.+.+..++++++++++||||||.++|.+++++|+++|++|+++||+||+|.+|.+++.+.+..++..+....++++
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi 244 (404)
T PTZ00376 165 GMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFL 244 (404)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEE
Confidence 99999875334567888899999999999999999999999999999999999999987421112223333333445899
Q ss_pred EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
+++||||.|+++|+|+||++++..++++++++...+.......+.+++.++|.++..+|+++++.+.|.+++++.+++++
T Consensus 245 ~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 324 (404)
T PTZ00376 245 VAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQ 324 (404)
T ss_pred EEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999985546688877777766665555556667788999999999987776677777888899999
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHhhh
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
++++.+.+.|+ +.+....+.+..+++|+|+|++++.+++++|++++||.+.|+|||++++++.++++.++++|++++..
T Consensus 325 ~~r~~l~~~L~-~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 325 NMRQLLYDELK-ALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHHHHHH-hcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCCeEEEeccCHHhHHHHHHHHHHHHhc
Confidence 99999999998 77643224556789999999999999999999988999999999999877999999999999998764
No 4
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3.3e-55 Score=419.84 Aligned_cols=393 Identities=51% Similarity=0.875 Sum_probs=321.0
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
|+++...+++++..+...++.+..+++|||+.|.|.+....++..+.+.+++.+.........|.+..|.+++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 2 FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred cccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 67788888888888777777665578999999987433333322478888888876543335799999999999999999
Q ss_pred hcCCCCCcccCCce--EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283 90 LFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 167 (410)
Q Consensus 90 ~~~~~~~~~~~~~i--~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 167 (410)
+.+..+..+++++| ++ |+|+++++.++..++..+.|||+|++++|+|+.|...++..|++++.+++.+++++++|+
T Consensus 82 ~~~~~~~~~~~~~i~v~i--T~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~ 159 (396)
T PRK09257 82 LFGADSPALAAGRVATVQ--TPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDF 159 (396)
T ss_pred hcCCCCcccccCeEEEEe--cCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCH
Confidence 87766555678887 66 999999999986555556799999999999999999999999999999985455688999
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+.+++.+.+.+++++++++++||||||.++|.+++++|+++|++|+++||+||+|.++.++ .+.+..++..+....+++
T Consensus 160 ~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~~~~~~~~~~~~~~v 238 (396)
T PRK09257 160 DAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDG-LEEDAYGLRAFAAAGLEL 238 (396)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccc-hHHHHHHHHHHHhcCCcE
Confidence 9999988754445788888999999999999999999999999999999999999998853 112233443433445689
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
++++||||.|+++|+|+||++++..+++.+.++...+....+..+.+++.+.|.++..+|.++++.+.|.+++++.++.+
T Consensus 239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~ 318 (396)
T PRK09257 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERI 318 (396)
T ss_pred EEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998543456565566666565554455667788889999999998877677888899999999
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l 406 (410)
+++++.+.+.|+ +.+.+..+.+..+++|+|+|++++.+++.++++++||.+.|.|||++++++++++++++++|++++
T Consensus 319 ~~rr~~l~~~L~-~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 319 KAMRQLLVEALK-AKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHHHHHHH-hcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHHHHHHhhC
Confidence 999999999998 775321256778999999999998888899989899999999999998789999999999999864
No 5
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-55 Score=380.13 Aligned_cols=402 Identities=60% Similarity=1.016 Sum_probs=382.7
Q ss_pred ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283 6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV 85 (410)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a 85 (410)
-.|||++|.+.|||||+.++.+|+.|+++..|||+.|.|.|.+|.|++.+.|++|..+......+-.|.|..|.+++.+.
T Consensus 24 ~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~ 103 (427)
T KOG1411|consen 24 ASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKL 103 (427)
T ss_pred ccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHH
Confidence 34789999999999999999999999999999999999999999999999999999887766666789999999999999
Q ss_pred HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283 86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 165 (410)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (410)
.+++..+.....+..++|..+++.+||+|+.+.+.++..+.++..|.+|.|+|+++...+..+|..+..+.+.+..+.++
T Consensus 104 sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gl 183 (427)
T KOG1411|consen 104 SAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGL 183 (427)
T ss_pred HHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecccccccc
Confidence 99999998888888889999999999999999999999999999999999999999999999999999999988888999
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
|++.+.+.+.+.++...++++.+.|||||+..+.+.|++|.++.++.+.+-+.|.+|++|..++.+.|...++.+...+.
T Consensus 184 d~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~ 263 (427)
T KOG1411|consen 184 DFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH 263 (427)
T ss_pred chHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC
Confidence 99999999999888889999999999999999999999999999999999999999999999989999999999999999
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
.++++.|++|.+|+.|.|+|.+.++|.+.+...++..+++.+.+.++++||.++++++..+|+|.++...|..+++.+.+
T Consensus 264 ~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~Mad 343 (427)
T KOG1411|consen 264 EILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMAD 343 (427)
T ss_pred ceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHH
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~ 405 (410)
++...|+.|.+.|+ +.|...+|+.+..+-|+|.|.++++++++.+.+++.|+++..||||+++++..++..+.++|-++
T Consensus 344 Ri~~mR~~L~d~L~-~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~v 422 (427)
T KOG1411|consen 344 RIISMRQQLFDALE-KEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAV 422 (427)
T ss_pred hhhhhHHHHhHHhh-cCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhH
Confidence 99999999999999 88887788889999999999999999999999999999999999999999999999999999887
Q ss_pred hhh
Q 015283 406 YHN 408 (410)
Q Consensus 406 l~~ 408 (410)
.+.
T Consensus 423 tk~ 425 (427)
T KOG1411|consen 423 TKN 425 (427)
T ss_pred hcC
Confidence 654
No 6
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-53 Score=402.40 Aligned_cols=353 Identities=19% Similarity=0.227 Sum_probs=293.0
Q ss_pred HhhhcCC-CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCc-eE
Q 015283 27 AFKADTD-EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VA 104 (410)
Q Consensus 27 ~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~-i~ 104 (410)
++.+... .++|+|++|+| ..+. |+.+.+++.+++..+.. +|++..|.++||++|++++.+.++..+++++ |+
T Consensus 20 ~~~~~~~~~~vi~l~iG~P----d~~~-p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eii 93 (393)
T COG0436 20 AAAELKGKEDVIDLSIGEP----DFPT-PEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEII 93 (393)
T ss_pred HHHHhcCCCCEEEeCCCCC----CCCC-CHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEE
Confidence 4444433 47999999998 4443 78899998888766432 7889999999999999999999998888877 99
Q ss_pred EEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcccChhhHHHHHhcCCCCcEE
Q 015283 105 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFI 183 (410)
Q Consensus 105 ~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~ 183 (410)
+ |+|+++++..+ +...+.|||+|++++|+|+.|...+..+|++++.+++..+ ++|.+|++.+++.+++ ++++
T Consensus 94 v--t~Ga~~al~~~--~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~---ktk~ 166 (393)
T COG0436 94 V--TAGAKEALFLA--FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP---KTKA 166 (393)
T ss_pred E--eCCHHHHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc---cceE
Confidence 9 99999999998 4555889999999999999999999999999999997544 5899999999999986 8889
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 263 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 263 (410)
+++++||||||.+++++++++|+++|++||++||.||+|.++.+++. .+.++..+....+++|+++||||.++++|||
T Consensus 167 i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwR 244 (393)
T COG0436 167 IILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAGARDRTITINSFSKTYGMTGWR 244 (393)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCCCcceEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999999998642 2223333333346899999999999999999
Q ss_pred cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 264 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 264 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
+||+++ .++++++.+. +.+.....+++..+|.++..+|+.... .+.+++.++.++++|+.+.+.|. +++
T Consensus 245 vG~~v~--~~~~l~~~~~----~~~~~~~~~~~~~~Q~aa~~aL~~~~~----~~~~~~~~~~~~~rrd~l~~~l~-~~~ 313 (393)
T COG0436 245 IGWVVG--PPEELIAALR----KLKSYLTSCAPTPAQYAAIAALNGPQS----DEVVEEMREEYRERRDLLVEALN-EIG 313 (393)
T ss_pred eeEeec--ChHHHHHHHH----HHHHhcccCCCHHHHHHHHHHhcCccc----hHHHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 999844 3366544443 444445668999999999999987632 12346777999999999999999 776
Q ss_pred CCCCccccc-CCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------C----eEEecCCCcccHHHHHHHHHHHh
Q 015283 344 SGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 344 ~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------g----Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
. +++.. |.+++|+|+++ +.+++.+|++++||.+.|| | |||++. +.+++++++++|++.+
T Consensus 314 g---~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~ 389 (393)
T COG0436 314 G---LSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFL 389 (393)
T ss_pred C---eeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHH
Confidence 2 56666 88999999865 3578999999999999997 2 999988 6799999999999988
Q ss_pred hhc
Q 015283 407 HNV 409 (410)
Q Consensus 407 ~~~ 409 (410)
...
T Consensus 390 ~~~ 392 (393)
T COG0436 390 AEY 392 (393)
T ss_pred Hhc
Confidence 754
No 7
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-51 Score=351.66 Aligned_cols=403 Identities=47% Similarity=0.833 Sum_probs=379.1
Q ss_pred ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCCcccHHHHH
Q 015283 6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNK 84 (410)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~ 84 (410)
.||+|.++...+|+.++.+.+.|.++.+|..+||+.|.|++..|.|++.|.|+++..+..+. .+.+.|.|..|.+.+++
T Consensus 2 ~~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~ 81 (410)
T KOG1412|consen 2 SMSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTK 81 (410)
T ss_pred CcchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhh
Confidence 48999999999999999999999999999999999999999999999999999987776544 45677999999999999
Q ss_pred HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCC-CCccceeeecCCCc
Q 015283 85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR-VPWSEYRYYDPKTV 163 (410)
Q Consensus 85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g-~~~~~v~~~~~~~~ 163 (410)
+.++.+.+.....+.++++.-+++.+||||+.+.+.++..+.+...|.+++|+|.++..+++..| ..+..+++.+.++.
T Consensus 82 ~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k 161 (410)
T KOG1412|consen 82 AATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENK 161 (410)
T ss_pred hhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCc
Confidence 99999988888888889998899999999999999999988888899999999999999999999 46888898888888
Q ss_pred ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283 164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243 (410)
Q Consensus 164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 243 (410)
.+|++.+...++..++..+++++.+.+||||..++.++|+.|++..++++++.+.|-+|++|..++.+.|.|.++.+.+.
T Consensus 162 ~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~ 241 (410)
T KOG1412|consen 162 CVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ 241 (410)
T ss_pred eecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc
Confidence 99999999999988888888887778999999999999999999999999999999999999999999999999999998
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
+...+++.||+|.||+.|.|+|-+.++.+++..+..+..++...++..+++||+.++++....|+.+++.++|...++.+
T Consensus 242 g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~M 321 (410)
T KOG1412|consen 242 GFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTM 321 (410)
T ss_pred CCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHH
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~ 403 (410)
..++.+.|+.|++.|. .++-++.|+.+..|.|+|.|.|+++..++.|.+++.|+..+.|||++++++..+++.+.++|.
T Consensus 322 ssRI~~MR~aLrd~L~-aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAId 400 (410)
T KOG1412|consen 322 SSRIKKMRTALRDHLV-ALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAID 400 (410)
T ss_pred HHHHHHHHHHHHHHHH-hcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHH
Confidence 9999999999999999 998888898899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc
Q 015283 404 DSYHNV 409 (410)
Q Consensus 404 ~~l~~~ 409 (410)
++++.+
T Consensus 401 e~Vr~~ 406 (410)
T KOG1412|consen 401 ETVRAI 406 (410)
T ss_pred HHHHhh
Confidence 988653
No 8
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-49 Score=356.49 Aligned_cols=368 Identities=14% Similarity=0.091 Sum_probs=289.1
Q ss_pred ccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283 8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia 87 (410)
.+..+++...|+...++.+..-+...+.. |+.|.| ..++ |+.+.+++.+++.....++|++..|.++|+++++
T Consensus 7 ~~~~~l~~~~~~vw~e~~~la~e~~~~~~--LgqGfp----~~~~-P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~ 79 (420)
T KOG0257|consen 7 LRNRNLSTSKPYVWTEINRLAAEHKVPNP--LGQGFP----DFPP-PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALA 79 (420)
T ss_pred cccccccccCCcHHHHHHHHHHhcCCCCc--ccCCCC----CCCC-cHHHHHHHHHHhccchhccccccCCchHHHHHHH
Confidence 34556777777655566655555443322 999998 4443 7999999999987765689999999999999999
Q ss_pred HHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee------cC
Q 015283 88 ELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY------DP 160 (410)
Q Consensus 88 ~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~------~~ 160 (410)
+.+...+|....+ ++|++ |.|+.+++..+ ++..+.+||+|++.+|.|+.|......+|..++.+++. ..
T Consensus 80 k~~se~~~~~~~~~~eVlV--T~GA~~ai~~~--~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s 155 (420)
T KOG0257|consen 80 KAYSEFYGGLLDPDDEVLV--TAGANEAISSA--LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSS 155 (420)
T ss_pred HHHHHHhccccCCcccEEE--ecCchHHHHHH--HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccC
Confidence 9998867665555 46988 99999999987 66779999999999999999999999999999999986 35
Q ss_pred CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 161 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 161 ~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
++|.+|.++++.++.+ +++++++|+||||||.++|+++|++|+++|++||+++|.||+|..+.+.+ .++..+..+
T Consensus 156 ~~~~~D~~~le~~~t~---kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~--~~h~r~asl 230 (420)
T KOG0257|consen 156 SDWTLDPEELESKITE---KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG--NKHIRIASL 230 (420)
T ss_pred ccccCChHHHHhhccC---CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC--CcceeeecC
Confidence 6789999999999997 89999999999999999999999999999999999999999999999764 234444455
Q ss_pred hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHH--HH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEW--KA 318 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~--~~ 318 (410)
.+..++++.++|+||+||++|||+||+++ ++.++..... .+......+++..|.+.+..+..+.....- ..
T Consensus 231 Pgm~ertitvgS~gKtf~~TGWrlGW~ig---p~~L~~~~~~----vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y 303 (420)
T KOG0257|consen 231 PGMYERTITVGSFGKTFGVTGWRLGWAIG---PKHLYSALFP----VHQNFVFTCPTPIQEASAAAFALELACLQPGGSY 303 (420)
T ss_pred CchhheEEEeccccceeeeeeeeeeeeec---hHHhhhhHHH----HhhccccccCcHHHHHHHHHHhhhhhccCCcchh
Confidence 56677999999999999999999999854 8775554433 333333344444455544444332100000 01
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------------HHHHHHhhhcCcEEEcC
Q 015283 319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------------KAQSDNMTNKWHVYMTK 381 (410)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ll~~~gi~v~~ 381 (410)
...+..+.++++|+.|.+.|. ++| +++..|++++|+|.+++ -.+..+++++.|+.+.|
T Consensus 304 ~~~~~~~~y~~krdil~k~L~-~lg----~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP 378 (420)
T KOG0257|consen 304 FITELVKEYKEKRDILAKALE-ELG----LKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIP 378 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcC----CccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeC
Confidence 234588999999999999999 998 58899999999998542 12367889999999988
Q ss_pred CC---------------eEEecCCCcccHHHHHHHHHH
Q 015283 382 DG---------------RISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 382 ~g---------------Ris~~~~~~~~i~~~~~~l~~ 404 (410)
.. |++++. +++.++.++++|+.
T Consensus 379 ~saF~s~~~~~~~~~~~r~~~~k-~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 379 PSAFGSREHIKVAERLVRFCFCK-ADETLRKAIERLKK 415 (420)
T ss_pred chhcCCchhhHHHHHHHHHHHHh-hHHHHHHHHHHHhh
Confidence 62 888877 88999999999883
No 9
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=5.3e-48 Score=370.64 Aligned_cols=362 Identities=16% Similarity=0.153 Sum_probs=286.4
Q ss_pred cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 86 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai 86 (410)
|+...++...+++.+..+.... ..+++|+|+.|.| +.++ ++.+.+++.+.+.... ..|++..|.++||+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~G~P----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~Lr~ai 100 (413)
T PLN00175 30 LQVAKRLEKFKTTIFTQMSSLA---IKHGAINLGQGFP----NFDG-PDFVKEAAIQAIRDGK-NQYARGFGVPELNSAI 100 (413)
T ss_pred cchhHHhhcCCCCHHHHHHHHh---hcCCeEecCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCcCCCCCCHHHHHHH
Confidence 4444445555555443333222 2357999999998 3332 6788888888776543 7899999999999999
Q ss_pred HHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283 87 AELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 165 (410)
Q Consensus 87 a~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (410)
++++.+.++..++++ +|++ |+|+++++.++ +...+.+||+|++++|+|+.|...++..|++++.+++.+ +++.+
T Consensus 101 a~~~~~~~g~~~~~~~~I~v--t~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~~ 175 (413)
T PLN00175 101 AERFKKDTGLVVDPEKEVTV--TSGCTEAIAAT--ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRP-PDFAV 175 (413)
T ss_pred HHHHHHHhCCCCCCCCCEEE--eCCHHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCc-ccCCC
Confidence 999988778888887 6988 99999999887 344578999999999999999999999999999999843 34889
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
|++.+++.+.. +++++++++||||||.++|.+++++|+++|++|+++||+||+|.++.+++ +..++..+....+
T Consensus 176 ~~~~l~~~~~~---~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~ 249 (413)
T PLN00175 176 PEDELKAAFTS---KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYE 249 (413)
T ss_pred CHHHHHHhcCc---CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcC
Confidence 99999998865 56777889999999999999999999999999999999999999998642 1223323333346
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
++|+++||||.|+++|+|+||+++ ++++++.+.... .....+++...|.++..+|.+. ..++++.++
T Consensus 250 ~vi~i~SfSK~~~~~G~RiG~~v~---~~~l~~~l~~~~----~~~~~~~s~~~Q~a~~~~l~~~------~~~~~~~~~ 316 (413)
T PLN00175 250 RTVTMNSLGKTFSLTGWKIGWAIA---PPHLTWGVRQAH----SFLTFATATPMQWAAVAALRAP------ESYYEELKR 316 (413)
T ss_pred cEEEEecchhhccCcchheeeeEe---CHHHHHHHHHHH----hhccCCCCHHHHHHHHHHHhCC------HHHHHHHHH
Confidence 899999999999999999999855 777666654432 2233467777888888888764 234678899
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------C-HHHHHHhhhcCcEEEcCC---------C----eE
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKD---------G----RI 385 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ll~~~gi~v~~~---------g----Ri 385 (410)
.++++++.+.+.|+ +.| +.+..|++++|+|+.+ + .+++..+++++||.+.|| + ||
T Consensus 317 ~~~~~~~~l~~~L~-~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRl 391 (413)
T PLN00175 317 DYSAKKDILVEGLK-EVG----FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRF 391 (413)
T ss_pred HHHHHHHHHHHHHH-HCC----CeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEE
Confidence 99999999999999 776 4677889999999754 2 356778887789999885 1 99
Q ss_pred EecCCCcccHHHHHHHHHHHhh
Q 015283 386 SLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 386 s~~~~~~~~i~~~~~~l~~~l~ 407 (410)
+++. +++++++++++|++.++
T Consensus 392 s~~~-~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 392 AFCK-DEETLRAAVERMKTKLK 412 (413)
T ss_pred EEcC-CHHHHHHHHHHHHHHHh
Confidence 9987 89999999999999875
No 10
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-47 Score=365.11 Aligned_cols=365 Identities=16% Similarity=0.151 Sum_probs=282.9
Q ss_pred cccccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK 84 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 84 (410)
|++..+++...++.+..+.....+. ..+++++|+.|.| ..++ ++.+.+++.+.........|+ ..|.+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~ 76 (399)
T PRK07681 3 YTLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNP----DMPP-ADFVREEMVHTANQKESYGYT-LSGIQEFHE 76 (399)
T ss_pred ccHhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhccccCCCC-CCCcHHHHH
Confidence 4544556555666555554443322 2467899999987 3222 677888887766432224454 589999999
Q ss_pred HHHHHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc
Q 015283 85 VTAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV 163 (410)
Q Consensus 85 aia~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 163 (410)
++++++...+|..+++ ++|++ |+|+++++.+++ ...+.+||+|++++|+|+.|...++..|++++.+++.+++++
T Consensus 77 aia~~~~~~~g~~~~~~~~I~i--t~G~~~al~~~~--~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 152 (399)
T PRK07681 77 AVTEYYNNTHNVILNADKEVLL--LMGSQDGLVHLP--MVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDF 152 (399)
T ss_pred HHHHHHHHHhCCCCCCCCeEEE--CCCcHHHHHHHH--HHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCC
Confidence 9999998878888888 79999 999999999984 334779999999999999999999999999999998655568
Q ss_pred ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283 164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243 (410)
Q Consensus 164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 243 (410)
.+|++.+++.+.+ +++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+.+. ...++..+...
T Consensus 153 ~~d~~~l~~~~~~---~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~ 227 (399)
T PRK07681 153 LPDLELIPEEIAD---KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGA 227 (399)
T ss_pred cCCHHHHHHhccc---cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCC
Confidence 8999999888764 677788899999999999999999999999999999999999999886422 11122222223
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
.+++|+++||||.||++|+|+||++. ++++++++.... .....+++.+.|.++..+|.+.. +++++.
T Consensus 228 ~~~~i~~~S~SK~~~~~GlRiG~~i~---~~~l~~~~~~~~----~~~~~~~s~~~q~~~~~~l~~~~------~~~~~~ 294 (399)
T PRK07681 228 KEVGVEINSLSKSYSLAGSRIGYMIG---NEEIVRALTQFK----SNTDYGVFLPIQKAACAALRNGA------AFCEKN 294 (399)
T ss_pred cccEEEEeecccccCCccceeEEEec---CHHHHHHHHHHH----hhcccCCCHHHHHHHHHHHhCcH------HHHHHH
Confidence 35799999999999999999999854 778666655432 22233577778888888887652 345677
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCCC----------eEEec
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG----------RISLA 388 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~g----------Ris~~ 388 (410)
++.++++++.+.+.|+ +.| +.+..+.+|+|+|+.+ +.+++.++++++||.+.||. ||+++
T Consensus 295 ~~~~~~~~~~l~~~L~-~~g----~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~ 369 (399)
T PRK07681 295 RGIYQERRDTLVDGFR-TFG----WNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV 369 (399)
T ss_pred HHHHHHHHHHHHHHHH-HCC----CcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec
Confidence 8889999999999998 776 4666788899999865 23567788876899998861 99998
Q ss_pred CCCcccHHHHHHHHHHH
Q 015283 389 GLSLAKCEYLADAIIDS 405 (410)
Q Consensus 389 ~~~~~~i~~~~~~l~~~ 405 (410)
. +++++++++++|+++
T Consensus 370 ~-~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 370 Q-DEEVLQQAVENIRNS 385 (399)
T ss_pred C-CHHHHHHHHHHHHHh
Confidence 6 789999999999883
No 11
>PLN02187 rooty/superroot1
Probab=100.00 E-value=8e-47 Score=365.99 Aligned_cols=353 Identities=14% Similarity=0.114 Sum_probs=275.1
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
++++|+|+.|+| +....+..++.+.+++.+.+..+....|.+..|.+++|+++++++...++..+++++|++ |+|++
T Consensus 65 ~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~i--t~G~~ 141 (462)
T PLN02187 65 NKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFL--TAGCN 141 (462)
T ss_pred CCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEE--eCCHH
Confidence 468999999987 222223346788888888775544467989999999999999999877788888999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++.+++. ..+.|||.|++++|+|+.|...++..|++++.+++.++++|.+|++.+++.+++ +++++++++||||
T Consensus 142 ~al~~~~~--~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~---~~~~v~i~nP~NP 216 (462)
T PLN02187 142 QGIEIVFE--SLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE---NTVAMVVINPNNP 216 (462)
T ss_pred HHHHHHHH--HhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC---CcEEEEEeCCCCC
Confidence 99999843 336799999999999999999999999999999986567799999999988864 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ...++++++||||.|++||||+||+ ++.
T Consensus 217 TG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~~-~~~~vi~l~SfSK~f~~pGlRiG~~--v~~ 291 (462)
T PLN02187 217 CGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKFA-SIVPVLTLAGISKGWVVPGWKIGWI--ALN 291 (462)
T ss_pred CCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHhc-cCCcEEEEecchhhcCCccceeEEE--Eec
Confidence 99999999999999999999999999999999887532 122332322 2246999999999999999999998 443
Q ss_pred Cch-hHHHHHHHHHhhccCc--ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283 273 SSD-LAARVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 349 (410)
Q Consensus 273 ~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 349 (410)
+++ .++ +.+.+....... ..+++.+.|.++..+|.+.. .+++++.++.++++++++.+.|+ +++. ..
T Consensus 292 ~p~~~~~-~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~-----~~~l~~~~~~l~~~r~~l~~~L~-~~~~---~~ 361 (462)
T PLN02187 292 DPEGVFE-TTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD-----KNFFAKKNKILKHNVDLVCDRLK-DIPC---VV 361 (462)
T ss_pred CchhHHH-HHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHHHHHh-hCCC---Cc
Confidence 333 222 112222222221 12457888888888886421 34567888999999999999998 7752 22
Q ss_pred -cccCCcceeeecCC---------C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 350 -FILRQIGMFSFTGL---------N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 350 -~~~~~~~~~~~~~~---------~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+..|++++|+|+.+ + .+++.++++++||.+.||. ||+++. +++.+++++++|+++++.+
T Consensus 362 ~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~rL~~~l~~~ 439 (462)
T PLN02187 362 CPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALERLKGFCTRH 439 (462)
T ss_pred CCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 34678899998743 1 2456778788899999972 999987 7899999999999998653
No 12
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=9.4e-47 Score=362.05 Aligned_cols=368 Identities=14% Similarity=0.116 Sum_probs=281.4
Q ss_pred CCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc
Q 015283 18 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 97 (410)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~ 97 (410)
.+++..+.+.+..+..+++|+|+.|+| |..+.-..++.+.+++.+.+.......|.|..|.+++|+++++++.+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 16 DDAVKFLKENFNEDDHRLAISFGFGDP-SCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHhcccCCCCceeeCCCCCC-CCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 344555555566677789999999998 3222223478888988887765433679999999999999999998888888
Q ss_pred ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283 98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
+++++|++ |+|+++++.++.. ..+.+||.|++++|+|+.|...++..|.+++.+++.+++++.+|++.+++.+..
T Consensus 95 ~~~~~I~i--t~G~~~al~~~~~--~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~- 169 (409)
T PLN00143 95 LSPDDVYL--TLGCKHAAEIIIK--VLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE- 169 (409)
T ss_pred CCHhhEEE--ecChHHHHHHHHH--HHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc-
Confidence 88999999 9999999999843 346799999999999999999999999999999885556788999999988764
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++..++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++.. ....+++++++||||.|
T Consensus 170 --~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~--~~~~~~~-~~~~~~vi~~~SfSK~f 244 (409)
T PLN00143 170 --NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK--PFVPMGL-FASIVPVITLGSISKRW 244 (409)
T ss_pred --CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC--CCcchhh-hcccCcEEEEccchhhc
Confidence 567777789999999999999999999999999999999999999987421 1112222 23345899999999999
Q ss_pred cccCCCcceEEEEeCCc-hhHHH--HHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSS-DLAAR--VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 334 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (410)
++||+|+||+ ++.++ .+++. +...+..... ....++.+.|.++..+|.+.. .+++++.++.++++++.+
T Consensus 245 ~~pGlRvG~~--v~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~ 316 (409)
T PLN00143 245 MIPGWGLGWL--VTCDPSGLLQICEIADSIKKALN-PAPFPPTFIQAAIPEILEKTT-----EDFFSKTINILRAALAFC 316 (409)
T ss_pred CCCccceEEE--EeeCchhhhhhHHHHHHHHHHHh-ccCCCCchHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHHH
Confidence 9999999998 44333 33222 1222222222 122346678888888887531 223467777888888888
Q ss_pred HHHhhhccCCCCCcc-cccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccH
Q 015283 335 FDSLSAKDKSGKDWS-FILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKC 395 (410)
Q Consensus 335 ~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i 395 (410)
.+.|. +++. .. ...|++|+|+|+.+. .+++.++++++||.+.||. ||+++. +++++
T Consensus 317 ~~~L~-~~~~---~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l 391 (409)
T PLN00143 317 YDKLK-EIPC---IMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSL 391 (409)
T ss_pred HHHHh-cCCC---CCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHH
Confidence 88888 7642 22 346789999998763 2346677777899999972 999986 78999
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
++++++|++++.+.
T Consensus 392 ~~al~rl~~~l~~~ 405 (409)
T PLN00143 392 EDGLGRLKSFCGRH 405 (409)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988653
No 13
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=7.2e-47 Score=361.64 Aligned_cols=342 Identities=14% Similarity=0.123 Sum_probs=265.5
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCCh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 111 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~gg 111 (410)
+.++|+|+.|++ ..++ ++.+.+++.+.........|++..|.++||+++++++.+.+|..++++ +|++ |+|+
T Consensus 29 ~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~Gs 101 (388)
T PRK07366 29 GKELIDLSLGSS----DLPA-PAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLP--LIGS 101 (388)
T ss_pred CCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEE--CCCc
Confidence 457899999987 3333 678888887766443336798889999999999999987778888888 6998 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++.++. ...+.+||+|++++|+|+.|...++..|++++.+++.+++++.+|++++++.+.. +++++++++|||
T Consensus 102 ~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~~p~N 176 (388)
T PRK07366 102 QEGTAHLP--LAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA---QARLMVLSYPHN 176 (388)
T ss_pred HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc---cceEEEEeCCCC
Confidence 99999974 3346799999999999999999999999999999986555678899999877754 566777899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.++|.+++++|+++|++||++||+||+|.++.+.+.. ...++..+....+++++++||||+||+||+|+||++.
T Consensus 177 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-- 253 (388)
T PRK07366 177 PTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV-EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-- 253 (388)
T ss_pred CCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC-CCCChhhCCCCcccEEEEeecccccCCcchhheehcC--
Confidence 9999999999999999999999999999999999864311 0122222222334789999999999999999999854
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++++..... ....+.+...+.++...+.+. .+++++.++.++++++.+.+.|+ +.+ +.+.
T Consensus 254 -~~~li~~l~~~~~----~~~~~~~~~~~~~a~~~l~~~------~~~l~~~~~~~~~~r~~l~~~L~-~~~----~~~~ 317 (388)
T PRK07366 254 -NAQLIQALRQVKA----VVDFNQYRGILNGAIAALTGP------QATVQQTVQIFRQRRDAFINALH-QIG----WPVP 317 (388)
T ss_pred -CHHHHHHHHHHHh----hcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Cccc
Confidence 8887766655332 111233232233343334321 24567889999999999999998 776 4566
Q ss_pred cCCcceeeecCCC-------HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHh
Q 015283 352 LRQIGMFSFTGLN-------KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 352 ~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
.|.+|+|+|+.+. .+++.++++++||.+.|| + ||+++. +++++++++++|++.+
T Consensus 318 ~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 318 LPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL 388 (388)
T ss_pred CCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence 7889999998652 344667777789999996 1 999986 8899999999998763
No 14
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6e-46 Score=357.68 Aligned_cols=354 Identities=16% Similarity=0.167 Sum_probs=279.3
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
+.++|+|+.|+| +..+....++.+.+++.+++..+....|++..|.+++|+++++++...++..+++++|++ |+|++
T Consensus 51 ~~~~i~l~~G~P-~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDP-SAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGCA 127 (430)
T ss_pred CCCeeeCCCCCC-CCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCHH
Confidence 457999999988 322223346888999888876544367988899999999999999888888888999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++.++...+ ..+||+|++++|+|+.|.......|++++.+++.++++|.+|++.+++.+++ +++++++++|+||
T Consensus 128 ~al~l~~~~l--~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~P~NP 202 (430)
T PLN00145 128 QAIEIIMSVL--AQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE---NTVAMVIINPNNP 202 (430)
T ss_pred HHHHHHHHHh--cCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc---CceEEEEeCCCCC
Confidence 9999984433 6799999999999999999999999999999876667789999999988875 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ ....++|+++||||.|++||||+||+++ ..
T Consensus 203 tG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pG~RlG~iv~-~~ 278 (430)
T PLN00145 203 CGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVF-GEVAPVLTLGSISKRWVVPGWRLGWIAT-CD 278 (430)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--Cccchhhh-cccCcEEEEeccccccCCCCeeEEEEEE-ec
Confidence 99999999999999999999999999999999887531 11222222 2345899999999999999999999843 12
Q ss_pred CchhHHH--HHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 273 SSDLAAR--VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 273 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
++.+++. +...+.... .....++.+.|.++..+|.+.. .+++++.++.++++++.+.+.|+ +++. +.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~-~~~g---~~~ 348 (430)
T PLN00145 279 PNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTK-----EEFFTKTLGLLKETADICYEKIK-EIKC---ITC 348 (430)
T ss_pred chhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHHHHh-cCCC---CCC
Confidence 3343332 223333332 2333567788888888887531 34567888999999999999998 7631 343
Q ss_pred -ccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 351 -ILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 351 -~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..|++++|+|+.++ .+++.++++++||.+.||. ||+++. +.+++++++++|++++.+.
T Consensus 349 ~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~ 425 (430)
T PLN00145 349 PHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRH 425 (430)
T ss_pred CcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 46899999998652 2467788888899999972 999986 8899999999999988653
No 15
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.7e-46 Score=364.75 Aligned_cols=360 Identities=18% Similarity=0.141 Sum_probs=274.9
Q ss_pred CCeeeeeeeeeec---------------CCC---------cccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHH
Q 015283 34 EKKLNLGVGAYRT---------------EEL---------QPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTA 87 (410)
Q Consensus 34 ~~~i~l~~g~~~~---------------~~~---------~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia 87 (410)
.++|+|+.|+|.+ ... ....|..+.+++.+++.. .....|++..|.+++|++++
T Consensus 46 ~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia 125 (481)
T PTZ00377 46 DSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVA 125 (481)
T ss_pred ceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHH
Confidence 5899999999921 111 011245666666655433 12366999999999999999
Q ss_pred HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283 88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 166 (410)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 166 (410)
+++.+.+|..+++++|++ |+|+++++.+++. ..+ .+||.|++++|+|+.|...++..|.+++.+++.++++|.+|
T Consensus 126 ~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~~--~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d 201 (481)
T PTZ00377 126 AFIERRDGVPKDPSDIFL--TDGASSGIKLLLQ--LLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLD 201 (481)
T ss_pred HHHHHhcCCCCChhhEEE--cCCHHHHHHHHHH--HhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCC
Confidence 999888888889999999 9999999999843 336 59999999999999999999999999999998666778999
Q ss_pred hhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh--
Q 015283 167 FEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-- 241 (410)
Q Consensus 167 ~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-- 241 (410)
++.+++.+.+. ..+++++++++||||||.++|.+++++|+++|++|+++||+||+|..+.+.+. ....++....
T Consensus 202 ~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~~~~~ 280 (481)
T PTZ00377 202 QEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE-KPFISFRKVLLE 280 (481)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC-CCcccHHHHHHh
Confidence 99999988641 12566677789999999999999999999999999999999999999886321 1222322221
Q ss_pred --hc---CCcEEEEeccccc-ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh----h
Q 015283 242 --TR---GMELLVAQSYSKN-LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP----A 311 (410)
Q Consensus 242 --~~---~~~~i~~~S~sK~-~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~ 311 (410)
.. ..++++++||||. +++||||+||+++...++++++++.+. .. ...+++.++|.++..+|++. .
T Consensus 281 l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~----~~-~~~~~~~~~Q~a~~~~l~~~~~~~~ 355 (481)
T PTZ00377 281 LPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKL----AS-INLCSNVVGQLMTGLMCNPPREGDA 355 (481)
T ss_pred hcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHH----hh-eecCCChHHHHHHHHHhCCCCCCcc
Confidence 11 1268999999997 599999999984322467766665542 22 23347778888888888642 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------------HHHHHHhhhc
Q 015283 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------------KAQSDNMTNK 374 (410)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ll~~ 374 (410)
....|.+++++.++.++++++.+.+.|+ +++ + +.+..|++|+|+|+.+. ..++..++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~rr~~l~~~L~-~~~--g-~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~ 431 (481)
T PTZ00377 356 SYPLYKRERDAIFTSLKRRAELLTDELN-KIE--G-VSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLES 431 (481)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC--C-cEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHH
Confidence 2233556667777788999999999998 773 1 57788999999996431 1235678888
Q ss_pred CcEEEcCCC-----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 375 WHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 375 ~gi~v~~~g-----------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+||.+.||. |||++ .+++++++++++|++++++
T Consensus 432 ~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 432 TGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred cCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHH
Confidence 899999862 99998 4888999999999998865
No 16
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=2.3e-46 Score=358.06 Aligned_cols=362 Identities=14% Similarity=0.153 Sum_probs=275.3
Q ss_pred cCCCCCCCCCcccchhHhh--hcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283 11 EGVTMAPPDPILGVSEAFK--ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
.++...++..+..+..... ...++++|+|+.|.| ..+ .++.+.+++.+.+.......|+|..|.++||+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~ 81 (389)
T PRK08068 7 ELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNP----DQP-TPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAAD 81 (389)
T ss_pred hHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Confidence 3344444444444443332 122357899999987 332 256788888877654434679889999999999999
Q ss_pred HhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283 89 LLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 167 (410)
Q Consensus 89 ~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 167 (410)
++...+|..++++ +|++ |+|+++++..+ +...+.+||+|++++|+|+.|...++..|++++.+++.+++++.+|+
T Consensus 82 ~~~~~~g~~~~~~~~i~i--t~G~~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~ 157 (389)
T PRK08068 82 FYKREYGVTLDPETEVAI--LFGGKAGLVEL--PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDY 157 (389)
T ss_pred HHHHHhCCCCCCCccEEE--cCCcHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCH
Confidence 9877777777888 7988 99999999887 34446799999999999999999999999999999985555788899
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+++++.+.+ ++.++++++||||||.++|.+++++|+++|++|+++||+||+|.++.+.+ ....+.....+..+++
T Consensus 158 ~~l~~~~~~---~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~--~~~~s~~~~~~~~~~~ 232 (389)
T PRK08068 158 TKIPEEVAE---KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDG--QKPVSFLQTPGAKDVG 232 (389)
T ss_pred HHHHHhccc---cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCC--CCCcChhhCCCccCCE
Confidence 999988864 56777778999999999999999999999999999999999999887642 1111221222234578
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
++++||||.||++|+|+||++. ++++++.+..... ....+++...|.++...+.+. .+++++.++++
T Consensus 233 i~~~S~SK~~g~~GlRiG~~~~---~~~l~~~l~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~ 299 (389)
T PRK08068 233 IELYTLSKTFNMAGWRVAFAVG---NESVIEAINLLQD----HLFVSLFGAIQDAAIEALLSD------QSCVAELVARY 299 (389)
T ss_pred EEEecchhccCCccceeEeEec---CHHHHHHHHHHHh----hccCCCChHHHHHHHHHHhCc------HHHHHHHHHHH
Confidence 9999999999999999999854 7887666655432 222344555667776666543 13457888999
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCc
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSL 392 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~ 392 (410)
+++++.+.+.|+ +.| +.+.++.+++|+|+.+ + .++.+.+++++||.+.|+. ||+++. ++
T Consensus 300 ~~~r~~~~~~L~-~~g----~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~ 373 (389)
T PRK08068 300 ESRRNAFISACR-EIG----WEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DE 373 (389)
T ss_pred HHHHHHHHHHHH-HCC----CcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CH
Confidence 999999999998 876 4667788999999855 2 3456777766799998851 999976 77
Q ss_pred ccHHHHHHHHHHH
Q 015283 393 AKCEYLADAIIDS 405 (410)
Q Consensus 393 ~~i~~~~~~l~~~ 405 (410)
+.+.+++++|+++
T Consensus 374 ~~l~~al~~l~~~ 386 (389)
T PRK08068 374 ERLREAVERIGKL 386 (389)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888888764
No 17
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=6.3e-46 Score=356.60 Aligned_cols=352 Identities=17% Similarity=0.138 Sum_probs=277.9
Q ss_pred hcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 30 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 30 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
+..+.++|+|+.|+| +......+++.+.+++.+++.......|.+..|.+++|+++++++...++..+++++|++ |+
T Consensus 27 ~~~~~~~i~l~~G~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~ 103 (409)
T PLN02656 27 EENGKRVISLGMGDP-TAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFI--TS 103 (409)
T ss_pred cccCCeeeecCCCCC-CcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE--eC
Confidence 344568999999998 221223347899999888776544478999999999999999999887788888999999 99
Q ss_pred ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283 110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p 189 (410)
|+++++.++.. ..+.+||+|++++|+|+.|.......|++++.+++.+++++.+|++.+++.+++ +++++++++|
T Consensus 104 G~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~P 178 (409)
T PLN02656 104 GCTQAIDVALS--MLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ---NTVALVIINP 178 (409)
T ss_pred ChHHHHHHHHH--HHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc---CceEEEEECC
Confidence 99999998843 346799999999999999988888899999999985556788999999988865 5677788999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
+||||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+ ....++++++||||.|++||+|+||++
T Consensus 179 ~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlRiG~~i- 254 (409)
T PLN02656 179 GNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-GSIVPVLTLGSLSKRWIVPGWRLGWFV- 254 (409)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-cccCcEEEEcccchhccCcceeEEEEE-
Confidence 99999999999999999999999999999999999987531 11222222 334589999999999999999999984
Q ss_pred EeC-------CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 270 VCS-------SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 270 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
+. ++++++++.... . .+.+++.+.|.++..+|++.. .+++++.++.++++++.+.+.|+ ++
T Consensus 255 -~~~~~~~~~~~~~~~~~~~~~----~-~~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~r~~~~~~L~-~~ 322 (409)
T PLN02656 255 -TTDPSGSFRDPKIVERIKKYF----D-ILGGPATFIQAAVPTILEQTD-----ESFFKKTINILKQSSDICCDRIK-EI 322 (409)
T ss_pred -EeCcccccccHHHHHHHHHHH----h-hhcCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHHHHHh-hC
Confidence 33 245555544322 2 233567788888888887531 23467888899999999999998 76
Q ss_pred CCCCCcc-cccCCcceeeecCCC---------H-HHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHH
Q 015283 343 KSGKDWS-FILRQIGMFSFTGLN---------K-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAII 403 (410)
Q Consensus 343 g~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~ 403 (410)
+. +. ...|.+|+|+|+.+. . +++.+++++.||.+.||. ||+++. +++++++++++|+
T Consensus 323 ~~---~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~eal~rl~ 398 (409)
T PLN02656 323 PC---ITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLEEALGRIK 398 (409)
T ss_pred CC---CcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHHHHHHHHH
Confidence 42 22 357889999998652 2 346677777899999972 999997 8999999999999
Q ss_pred HHhhhc
Q 015283 404 DSYHNV 409 (410)
Q Consensus 404 ~~l~~~ 409 (410)
+++.+.
T Consensus 399 ~~~~~~ 404 (409)
T PLN02656 399 SFYLRH 404 (409)
T ss_pred HHHHHh
Confidence 988653
No 18
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=7.4e-46 Score=357.95 Aligned_cols=355 Identities=13% Similarity=0.105 Sum_probs=273.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++++++.|+| +..+.+ +|+.+.+++.+.........|++..|.++||+++++++.+.+|..+++++|++ |+|+++
T Consensus 32 ~~~~~~~~G~p-~~~~~~-~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G~~~ 107 (433)
T PRK06855 32 VKITWENIGDP-IAKGEK-IPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNGLGD 107 (433)
T ss_pred ccccccccCCC-cccCCC-CCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCcHHH
Confidence 46899999987 322333 36788888877764433478999999999999999999888888889999999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
++..+. ..+.+||.|++++|+|+.|.... ...|.+++.+++.++++|.+|++.+++.+++. ++++++++++||||
T Consensus 108 al~~~~---~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~l~~P~NP 183 (433)
T PRK06855 108 AIAKIY---GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN-PSIAGILLINPDNP 183 (433)
T ss_pred HHHHHH---HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC-CCceEEEEECCCCC
Confidence 998873 34679999999999999987543 35688888888855567889999999998742 24566777899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.++|.+++++|+++|++||++||+||+|.++.+.+. ...++..+.. ...+|+++||||.+++||+|+||+++...
T Consensus 184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p~~ 260 (433)
T PRK06855 184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK--KTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVYNA 260 (433)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEeCC
Confidence 99999999999999999999999999999999987431 2223333322 23679999999999999999999843111
Q ss_pred -CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 273 -SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 273 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
.+..+..+...+..... ...+++.+.|.++..+++++.+ ++++++.++.++++++.+.+.|+ +.. + +.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~L~-~~~--~-~~~~ 331 (433)
T PRK06855 261 DKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEY----KNYLKERNKRYEKRSNIAYEKLK-DVP--G-LKVN 331 (433)
T ss_pred chhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcH----HHHHHHHHHHHHHHHHHHHHHHh-cCC--C-eecc
Confidence 11222223333332222 2235677889999989887654 45678889999999999999998 762 1 4677
Q ss_pred cCCcceeeecCCCH--------------------------------HHHHHhhhcCcEEEcCCC---------eEEecCC
Q 015283 352 LRQIGMFSFTGLNK--------------------------------AQSDNMTNKWHVYMTKDG---------RISLAGL 390 (410)
Q Consensus 352 ~~~~~~~~~~~~~~--------------------------------~~~~~ll~~~gi~v~~~g---------Ris~~~~ 390 (410)
.|++|+|+|+.+.. +++..++++.||.+.||. |||++..
T Consensus 332 ~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~ 411 (433)
T PRK06855 332 RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLER 411 (433)
T ss_pred CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCC
Confidence 89999999986631 345567777899999982 9999977
Q ss_pred CcccHHHHHHHHHHHhhh
Q 015283 391 SLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~ 408 (410)
+++++++++++|++++.+
T Consensus 412 ~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 412 DEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 899999999999999875
No 19
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=7.6e-46 Score=365.41 Aligned_cols=377 Identities=19% Similarity=0.166 Sum_probs=284.3
Q ss_pred cccccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK 84 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 84 (410)
|..+.++..++++.+..+...... ..+.++|+|+.|.| +..+++ .|+.+.+++.+.+.. ...|++..|.++||+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p-~~~~~~-~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lRe 192 (517)
T PRK13355 117 FKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNP-APFGFR-TPDEVVYDMAQQLTD--TEGYSDSKGLFSARK 192 (517)
T ss_pred CChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCC-CcCCCC-CCHHHHHHHHHHhhc--CCCCCCCcChHHHHH
Confidence 444555666666555444433332 23468999999998 333443 367888888776643 367999999999999
Q ss_pred HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283 85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 164 (410)
Q Consensus 85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 164 (410)
++++++....+..+++++|++ |+|+++++.++.. ..+.+||+|++++|+|+.|...++..|.+++.+++.++++|.
T Consensus 193 aia~~~~~~~~~~~~~~~I~i--t~G~~eal~~~~~--~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~ 268 (517)
T PRK13355 193 AIMQYAQLKGLPNVDVDDIYT--GNGVSELINLSMS--ALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY 268 (517)
T ss_pred HHHHHHHhcCCCCCChhHEEE--eCcHHHHHHHHHH--HhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence 999998776655678999999 9999999999843 347799999999999999999999999999999886556789
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
+|++++++.+.. +++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+. ..
T Consensus 269 ~d~~~l~~~~~~---~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~~-~~ 342 (517)
T PRK13355 269 PDIDDIRSKITS---RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASLA-PD 342 (517)
T ss_pred CCHHHHHHhcCc---CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHhC-CC
Confidence 999999998864 678888899999999999999999999999999999999999999986531 122322221 12
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 324 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 324 (410)
..+++++||||.|+++|||+||+++ ..++++++.+...+.... ....+++..+|.++..+|.+... +.+++.+.
T Consensus 343 ~~vi~~~S~SK~~~~~G~RiG~~i~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~---~~~~~~~~- 416 (517)
T PRK13355 343 LFCVTFSGLSKSHMIAGYRIGWMIL-SGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQS---VKDYLVPG- 416 (517)
T ss_pred CeEEEEecchhhccCcccceEEEEe-eCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCcc---HHHHHHHH-
Confidence 2478889999999999999999853 235555555554443322 22235667788888888865322 13334443
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------CHHHHHHhhhcCcEEEcCCC----------eE
Q 015283 325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------NKAQSDNMTNKWHVYMTKDG----------RI 385 (410)
Q Consensus 325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~v~~~g----------Ri 385 (410)
+++.++++++.+.|+ +++ + +.+..|++++|+|+.+ +.+++.+++++.||.+.||. ||
T Consensus 417 ~~~~~~r~~l~~~L~-~~~--g-~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ri 492 (517)
T PRK13355 417 GRVYEQRELVYNALN-AIP--G-ISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRV 492 (517)
T ss_pred HHHHHHHHHHHHHHh-cCC--C-cccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEE
Confidence 334456788999998 772 1 5788899999999654 23567788888899999862 99
Q ss_pred EecCCCcccHHHHHHHHHHHhhh
Q 015283 386 SLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 386 s~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+++. +++++++++++|++.+..
T Consensus 493 s~~~-~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 493 VYLP-RLEDLEDAMDRLADFFSY 514 (517)
T ss_pred EeCC-CHHHHHHHHHHHHHHHHH
Confidence 9975 899999999999999865
No 20
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-46 Score=356.38 Aligned_cols=347 Identities=13% Similarity=0.132 Sum_probs=267.6
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCCh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 111 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~gg 111 (410)
++++++|+.|.| ..+ .++.+.+++.+.........|++..|.+++|+++++++.+.++..++++ +|++ |+|+
T Consensus 32 ~~~~~~l~~g~p----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~i--t~G~ 104 (403)
T PRK08636 32 GEDIIDFSMGNP----DGP-TPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVA--TMGS 104 (403)
T ss_pred CCCEEEcCCcCC----CCC-CCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--CCCh
Confidence 357899999987 222 2455666655544332237899899999999999999977778878887 7999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH----HHHHhcCCCCcEEEEeC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM----IADIKAAPGGSFILLHG 187 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l----~~~i~~~~~~~~~ii~~ 187 (410)
++++.+++. ..+.+||.|++++|+|+.+...++..|++++.+++..++++++|++.+ ++.+++..+++++++++
T Consensus 105 ~~al~~~~~--~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~ 182 (403)
T PRK08636 105 KEGYVHLVQ--AITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVN 182 (403)
T ss_pred HHHHHHHHH--HhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEe
Confidence 999999843 346799999999999999999999999999999874345678998755 55555434567888889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 267 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l 267 (410)
+||||||.++|.+++++|+++|++|+++||+||+|.++.+++. ...++..+....+.+++++||||.||+||+|+||+
T Consensus 183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i 260 (403)
T PRK08636 183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFV 260 (403)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCCccccEEEEEecccccCCccceeeee
Confidence 9999999999999999999999999999999999999886421 11222222222346788999999999999999997
Q ss_pred EEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283 268 NVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 347 (410)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 347 (410)
+. ++++++++..... ....+++...|.++..++.+. .+++++.++.++++++.+.+.|+ +.+
T Consensus 261 v~---~~~li~~~~~~~~----~~~~~~~~~~q~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~---- 322 (403)
T PRK08636 261 VG---NKKLVGALKKIKS----WLDYGMFTPIQVAATIALDGD------QSCVEEIRETYRKRRDVLIESFA-NAG---- 322 (403)
T ss_pred eC---CHHHHHHHHHHHH----HhcccCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----
Confidence 44 7887766655332 111234455666666555432 24467888999999999999998 765
Q ss_pred cccccCCcceeeecCCC--------HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 348 WSFILRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 348 ~~~~~~~~~~~~~~~~~--------~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+..+.+|+|+|+.+. .+++.++++++||.+.||. ||+++. +++++++++++|+++++.+
T Consensus 323 ~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 323 WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIE-NENRIRQAARNIKKFLKEL 401 (403)
T ss_pred CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 46677889999998663 3456677777899999971 999984 8999999999999998764
No 21
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-46 Score=355.38 Aligned_cols=345 Identities=17% Similarity=0.163 Sum_probs=270.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-CceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~ggt 112 (410)
.+.|+|+.|.+ .....++.+.+++.+.+.......|++..|.+++|+++++++.+.+|..+++ ++|++ |+|++
T Consensus 39 ~~~i~l~~g~~----~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~i--t~Ga~ 112 (405)
T PRK06207 39 GRPVDFSHGDV----DAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELII--TPGTQ 112 (405)
T ss_pred CCceecCCcCC----CCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCCcH
Confidence 36799999987 2212357888887777654333679888999999999999998877877777 89999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee---cCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY---DPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p 189 (410)
+++.++. ...+.+||+|++++|+|+.+...++..|++++.+++. .++++++|++.+++.+.+ +++++++++|
T Consensus 113 ~al~~~~--~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~---~~k~v~l~~P 187 (405)
T PRK06207 113 GALFLAV--AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA---GVRVFLFSNP 187 (405)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh---cCeEEEECCC
Confidence 9999874 3347799999999999999999999999999999874 224688999999998875 5677788999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
|||||.+++.+++++|+++|++||++||+||+|.++.+.+. ...++..+....+++++++||||.|++||+|+||++.
T Consensus 188 ~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~ 265 (405)
T PRK06207 188 NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG 265 (405)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc
Confidence 99999999999999999999999999999999999986431 1112222222346899999999999999999999854
Q ss_pred EeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283 270 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 349 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 349 (410)
++++++++..... ....+.+.+.|.++..+|++.. .++++..+.++++++.+.+.|+ +++. +.
T Consensus 266 ---~~~l~~~~~~~~~----~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~ 328 (405)
T PRK06207 266 ---SPAIIDRMEKLQA----IVSLRAAGYSQAVLRTWFSEPD------GWMKDRIARHQAIRDDLLRVLR-GVEG---VF 328 (405)
T ss_pred ---CHHHHHHHHHHHh----HhccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHh-cCCC---ce
Confidence 7786666654332 2223556678888888887531 1234555667778888888888 7631 56
Q ss_pred cccCCcceeeecCCC------HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 350 FILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 350 ~~~~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+..|.+|+|+|+.+. .++..++++++||.+.||. |||++. +.+++++++++|+++++++
T Consensus 329 ~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 329 VRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred ecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 677889999998652 3356677666899999962 999987 8899999999999998764
No 22
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=6e-46 Score=355.06 Aligned_cols=365 Identities=18% Similarity=0.152 Sum_probs=276.9
Q ss_pred cccccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK 84 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 84 (410)
|++..++....+.....+.+...+. ..+++++|+.|.+ ..+ +++.+.+++.+.+.......|++..|.+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ 76 (385)
T PRK09276 2 MKLADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDP----DLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRK 76 (385)
T ss_pred cchhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHH
Confidence 3444455555555444434333322 3457899999987 332 26788888887765433367988899999999
Q ss_pred HHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc
Q 015283 85 VTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV 163 (410)
Q Consensus 85 aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 163 (410)
++++++.+.+|..++++ +|++ |+|+++++..+... .+.+||+|++++|+|+.|...++..|.+++.+++.+++++
T Consensus 77 aia~~~~~~~g~~~~~~~~ii~--t~G~~~~i~~~~~~--~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~ 152 (385)
T PRK09276 77 AVADWYKRRFGVELDPETEVIS--LIGSKEGIAHIPLA--FVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGF 152 (385)
T ss_pred HHHHHHHHHhCCCCCCCCcEEE--ccCcHHHHHHHHHH--hCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCC
Confidence 99999987777777776 4887 89999999998433 3679999999999999999999999999999998555567
Q ss_pred ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283 164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243 (410)
Q Consensus 164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 243 (410)
.+|++.+++.+.+ +++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++.. ..++..+...
T Consensus 153 ~~d~~~l~~~~~~---~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~ 227 (385)
T PRK09276 153 LPDLDAIPEDVAK---KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYK--PPSFLEVPGA 227 (385)
T ss_pred cCCHHHHHHhccc---cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCC--CCChhccCCC
Confidence 8899999887764 6677778899999999999999999999999999999999999998764211 1222222222
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
.+++++++||||.||++|+|+||+++ ++++++++..... ....+++...|.++..+|.+. .+++++.
T Consensus 228 ~~~~i~~~S~SK~~g~~GlRiG~~i~---~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~ 294 (385)
T PRK09276 228 KDVGIEFHSLSKTYNMTGWRIGFAVG---NADLIAGLGKVKS----NVDSGVFQAIQEAGIAALNGP------QEVVEEL 294 (385)
T ss_pred cCCEEEEecchhhcCCcchhheeeeC---CHHHHHHHHHHHh----hccCCCCHHHHHHHHHHHcCc------HHHHHHH
Confidence 35789999999999999999999854 7786666654322 222345556777777777642 3445788
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCC--------C--eEEec
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLA 388 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~ 388 (410)
+++++++++++.+.|+ +.+ +.+..+.+++|+|+.+ + .+++.++++++||.+.|| + ||+++
T Consensus 295 ~~~~~~~~~~l~~~L~-~~~----~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~ 369 (385)
T PRK09276 295 RKIYQERRDILVEGLR-KLG----LEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT 369 (385)
T ss_pred HHHHHHHHHHHHHHHH-hCC----CcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC
Confidence 8899999999999998 776 4667788899999865 2 345677777789999996 1 99998
Q ss_pred CCCcccHHHHHHHHHH
Q 015283 389 GLSLAKCEYLADAIID 404 (410)
Q Consensus 389 ~~~~~~i~~~~~~l~~ 404 (410)
. +++++.+++++|++
T Consensus 370 ~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 370 V-PDERIEEAVERIKK 384 (385)
T ss_pred C-CHHHHHHHHHHHhh
Confidence 5 78888888888864
No 23
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=8.3e-46 Score=354.02 Aligned_cols=360 Identities=16% Similarity=0.192 Sum_probs=282.9
Q ss_pred cCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283 11 EGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
.+++..++..+..+.....+ ...+++++|+.|.+ +.+ +++.+.+++.+.+.... ..|.+..|.+++|+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~ 80 (387)
T PRK08960 7 RRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEP----DFT-TAEPIVAAGQAALAAGH-TRYTAARGLPALREAIAG 80 (387)
T ss_pred hHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCC----CCC-CCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHH
Confidence 34555666666665544432 23467899999998 333 37889999888776443 679889999999999999
Q ss_pred HhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283 89 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 168 (410)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 168 (410)
++...+|..+++++|++ |+|+++++.++.. ..+.+||+|++++|+|+.+...+...|.+++.+++.++.++.+|++
T Consensus 81 ~~~~~~g~~~~~~~i~i--t~G~~~al~~~~~--~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 156 (387)
T PRK08960 81 FYAQRYGVDVDPERILV--TPGGSGALLLASS--LLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPA 156 (387)
T ss_pred HHHHHhCCCCChhhEEE--ccCcHHHHHHHHH--HhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHH
Confidence 99877788888999999 9999999999843 3377999999999999999999999999999999854456789999
Q ss_pred hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283 169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248 (410)
Q Consensus 169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (410)
.+++.+++ +++++++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++ ...++ ....++++
T Consensus 157 ~l~~~~~~---~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~---~~~~~---~~~~~~vi 227 (387)
T PRK08960 157 LVERHWNA---DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV---DAASV---LEVDDDAF 227 (387)
T ss_pred HHHHHhCc---cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCh---hhccCCEE
Confidence 99988875 56677789999999999999999999999999999999999999987642 11121 23346899
Q ss_pred EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
+++||||.+|++|+|+||+++ ++++++++... ......+++.+.|.++...+.+. +.+++++.++.++
T Consensus 228 ~~~S~SK~~g~~GlRiG~~~~---~~~~~~~~~~~----~~~~~~~~s~~~q~a~~~~l~~~-----~~~~l~~~~~~~~ 295 (387)
T PRK08960 228 VLNSFSKYFGMTGWRLGWLVA---PPAAVPELEKL----AQNLYISASTPAQHAALACFEPE-----TLAILEARRAEFA 295 (387)
T ss_pred EEeecccccCCcccEEEEEEc---CHHHHHHHHHH----HhhhccCCCHHHHHHHHHHhhcC-----cHHHHHHHHHHHH
Confidence 999999999999999999855 77766655442 22223356778888887777643 1345678889999
Q ss_pred HHHHHHHHHhhhccCCCCCccc-ccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCC---------C--eEEecCC
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD---------G--RISLAGL 390 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~---------g--Ris~~~~ 390 (410)
++++.+.+.|+ +.|. .. ..|.+++|+|+.+ + .+++.++++++||.+.|| + ||+++.
T Consensus 296 ~~~~~l~~~L~-~~~~----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~- 369 (387)
T PRK08960 296 RRRDFLLPALR-ELGF----GIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ- 369 (387)
T ss_pred HHHHHHHHHHH-hcCC----cCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-
Confidence 99999999998 7763 33 4578899999754 2 345667777789999986 1 999987
Q ss_pred CcccHHHHHHHHHHHhh
Q 015283 391 SLAKCEYLADAIIDSYH 407 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~ 407 (410)
+.+++.+++++|++++.
T Consensus 370 ~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 370 SLPRLQEAVERIARGLR 386 (387)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 78899999999988764
No 24
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=6.4e-46 Score=353.99 Aligned_cols=341 Identities=16% Similarity=0.143 Sum_probs=274.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt 112 (410)
++.|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++..|.+++|+++++++.+.++..++++ +|++ |+|++
T Consensus 20 ~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 91 (378)
T PRK07682 20 EGVISLGVGEP----DFV-TPWNVREASIRSLEQGY-TSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV--TVGAS 91 (378)
T ss_pred CCeEEeCCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 47899999998 222 25667777777665433 6798889999999999999987777777775 7999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++.++. ...+.+||+|++++|+|+.|...++..|.+++.+++..++++.+|++.+++.+.+ +++++++++||||
T Consensus 92 ~al~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~~~~p~NP 166 (378)
T PRK07682 92 QALDVAM--RAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA---KTKAILLCSPNNP 166 (378)
T ss_pred HHHHHHH--HHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc---ccEEEEEECCCCC
Confidence 9999884 3346799999999999999999999999999888875445688999999998865 5677777899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.++|.+++++|+++|++|++++|+||+|.++.+++ ...++..+.+..+++++++||||.|++||+|+||+++
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~--- 240 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE---AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA--- 240 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC---CCCChhhcccccCCEEEEecCcccccChhhhhhhhhc---
Confidence 9999999999999999999999999999999998753 1222323333346899999999999999999999854
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++++..... ....+++.++|.++..+|++.. .++++.++.++++++++.+.|+ +++ +.+..
T Consensus 241 ~~~~i~~l~~~~~----~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~~ 305 (378)
T PRK07682 241 PVYFSEAMLKIHQ----YSMMCAPTMAQFAALEALRAGN------DDVIRMRDSYRKRRNFFVTSFN-EIG----LTCHV 305 (378)
T ss_pred CHHHHHHHHHHHH----hhccCCCHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHH-HCC----CccCC
Confidence 7887776655322 2233567788888888887642 2356888899999999999999 876 46677
Q ss_pred CCcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 353 RQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 353 ~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|++++|+|+.+ + .+++.++++++||.+.||. |||++. +++++++++++|+++++..
T Consensus 306 p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 306 PGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 88999999743 3 3456677766799999861 999987 8899999999999998764
No 25
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.3e-45 Score=356.36 Aligned_cols=354 Identities=14% Similarity=0.173 Sum_probs=271.3
Q ss_pred hhhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-----------CCCccCcCCcccHHHHHHHHHHhcCCCC
Q 015283 28 FKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-----------GENKEYLPIEGLAAFNKVTAELLFGADN 95 (410)
Q Consensus 28 ~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~aia~~~~~~~~ 95 (410)
++...+| +.|+|+.+++ +.+.+.+.+.+...... .....|++..|.++||+++++++.+.++
T Consensus 31 y~~~~~p~g~i~L~~~En------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~ 104 (468)
T PLN02450 31 YDEIKNPSGIIQMGLAEN------QLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRG 104 (468)
T ss_pred CCcccCCCeeEEeehhHh------HhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhC
Confidence 3333445 6899999987 43345555555443210 1224588888999999999999976655
Q ss_pred --CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHHH
Q 015283 96 --SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 96 --~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~ 172 (410)
..+++++|++ |+|+++++.+++ ...+.|||.|++++|+|+.|...+. ..|++++.+++.+++++.+|++.+++
T Consensus 105 ~~~~v~~~~Iii--t~Ga~~al~~l~--~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~ 180 (468)
T PLN02450 105 NKVTFDPNKLVL--TAGATSANETLM--FCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEE 180 (468)
T ss_pred CCCCcChHHeEE--ccChHHHHHHHH--HHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHH
Confidence 3468899999 999999999983 3446799999999999999988888 58999999998656778889999988
Q ss_pred HHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-------
Q 015283 173 DIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------- 242 (410)
Q Consensus 173 ~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------- 242 (410)
.+.+. ..++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+.+. ...++.....
T Consensus 181 ~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~ 258 (468)
T PLN02450 181 AYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENT 258 (468)
T ss_pred HHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccC
Confidence 87641 23567777889999999999999999999999999999999999998876431 1212222221
Q ss_pred -cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283 243 -RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 321 (410)
Q Consensus 243 -~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~ 321 (410)
..+++++++||||.|+++|+|+||++ +.++.+.+.+.. .. .+..++.++|.++..+|+++++.+ ++++
T Consensus 259 ~~~~~vi~l~S~SK~~~l~GlRiG~li--~~~~~l~~~~~~----~~--~~~~~s~~~Q~a~~~~L~~~~~~~---~~l~ 327 (468)
T PLN02450 259 DVSNRVHIVYSLSKDLGLPGFRVGAIY--SNDEMVVSAATK----MS--SFGLVSSQTQYLLSALLSDKKFTK---NYLE 327 (468)
T ss_pred CCCCcEEEEEeccccCCCCCccEEEEE--ECCHHHHHHHHH----Hh--hcCCCCHHHHHHHHHHhCCchhHH---HHHH
Confidence 24689999999999999999999984 444443443322 21 223467788999999999876532 2467
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------HHHHHHhhhcCcEEEcCCC-------
Q 015283 322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------KAQSDNMTNKWHVYMTKDG------- 383 (410)
Q Consensus 322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~~g------- 383 (410)
+.+++++++++.+.+.|+ +.| +.+.++++|+|+|+.+. .+++.++++++||.+.||.
T Consensus 328 ~~~~~l~~rr~~l~~~L~-~~g----i~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~ 402 (468)
T PLN02450 328 ENQKRLKQRQKKLVSGLE-AAG----IKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEP 402 (468)
T ss_pred HHHHHHHHHHHHHHHHHH-HcC----CcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCC
Confidence 788999999999999999 887 46778899999998752 2246677777899999972
Q ss_pred ---eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 384 ---RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 ---Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++..+++++++++++|++++.+.
T Consensus 403 g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 403 GWFRVCFANMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 99999768899999999999988653
No 26
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.4e-45 Score=353.47 Aligned_cols=361 Identities=17% Similarity=0.138 Sum_probs=279.4
Q ss_pred CCCCCCCCCcccchhHhhhc---CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283 12 GVTMAPPDPILGVSEAFKAD---TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
++...+++.+..+.+.+++. .+.++|+|+.|+| ..++ ++.+.+++.+.+.. ...|++..|.+++|+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~ 76 (396)
T PRK09147 4 RLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEP----KHPT-PAFIKDALAANLDG--LASYPTTAGLPALREAIAA 76 (396)
T ss_pred hhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCC----CCCC-CHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHH
Confidence 45566666676666666533 3568999999997 3332 67888888776642 4779889999999999999
Q ss_pred HhcCCCCCc-ccCC-ceEEEecCChhhHHHHHHHHHHHhCC---CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc
Q 015283 89 LLFGADNSV-LKEQ-RVATVQGLSGTGSLRLAAALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV 163 (410)
Q Consensus 89 ~~~~~~~~~-~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 163 (410)
++.+.++.. ++++ +|++ |+|+++++.++.. ..+.+ ||.|++++|+|+.|...++..|++++.+|+.++++|
T Consensus 77 ~~~~~~g~~~~~~~~~i~i--t~G~~~al~~~~~--~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~ 152 (396)
T PRK09147 77 WLERRYGLPALDPATQVLP--VNGSREALFAFAQ--TVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNF 152 (396)
T ss_pred HHHHHhCCCcCCccceEEE--CCChHHHHHHHHH--HHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccC
Confidence 998777877 7775 8999 9999999998743 34678 899999999999999999999999999998655678
Q ss_pred ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH--h
Q 015283 164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--A 241 (410)
Q Consensus 164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~ 241 (410)
.+|++.+++.+.+ ++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++.......+... .
T Consensus 153 ~~d~~~l~~~~~~---~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 229 (396)
T PRK09147 153 APDFDAVPAEVWA---RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAEL 229 (396)
T ss_pred ccCHHHHHHHHhh---ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhcccc
Confidence 9999999887764 5677778999999999999999999999999999999999999998865311111111111 1
Q ss_pred --hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHH
Q 015283 242 --TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAE 319 (410)
Q Consensus 242 --~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 319 (410)
...+++++++||||.++++|+|+||++. ++++++++..... ....+++.+.|.++...+.+. ++
T Consensus 230 ~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~---~~~l~~~~~~~~~----~~~~~~~~~~q~a~~~~~~~~-------~~ 295 (396)
T PRK09147 230 GRDDFKRLVVFHSLSKRSNVPGLRSGFVAG---DAALLKKFLLYRT----YHGCAMPPAVQAASIAAWNDE-------AH 295 (396)
T ss_pred CccccccEEEEeccccccCCccceeeeecC---CHHHHHHHHHHhh----hcccCCCHHHHHHHHHHhcch-------hH
Confidence 1246899999999999999999999744 7776666554322 122345667777766666532 34
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC--------------
Q 015283 320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD-------------- 382 (410)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~-------------- 382 (410)
+++.++.++++++.+.+.|+ +. +.+..|++|+|+|+.+. .+++.++++++||.+.||
T Consensus 296 ~~~~~~~~~~~~~~~~~~L~-~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~ 369 (396)
T PRK09147 296 VRENRALYREKFDAVTPILA-PV-----LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGA 369 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHH-Hh-----cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCCCCCC
Confidence 57888999999999999988 64 24567889999999762 455678877789999775
Q ss_pred C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 383 G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 383 g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
+ ||+++. +++++++++++|+++++
T Consensus 370 ~~iRi~~~~-~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 370 GRVRIALVA-PLAECVEAAERIVDFCR 395 (396)
T ss_pred CeEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 1 999987 78899999999998874
No 27
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-45 Score=352.83 Aligned_cols=338 Identities=14% Similarity=0.162 Sum_probs=266.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+++++|+.|.| ..++ ++.+.++..+..... ...|++..|.+++|+++++++.+.++..+++++|++ |+|+++
T Consensus 29 ~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~i--t~G~~~ 100 (384)
T PRK06348 29 PDIIDLSLGDP----DLIT-DESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMA--TVGACH 100 (384)
T ss_pred CCcEEcCCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEE--cCChHH
Confidence 56899999987 3333 466666544433333 377999999999999999999877788888999999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.+++ ...+.+||+|++++|+|..|...++..|.+++.+++.+++++.+|++.+++.++. +++++++++|||||
T Consensus 101 al~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NPt 175 (384)
T PRK06348 101 GMYLAL--QSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS---KTKAIILNSPNNPT 175 (384)
T ss_pred HHHHHH--HHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc---CccEEEEeCCCCCC
Confidence 999984 3347799999999999999999999999999888875556788999999988864 55666778999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.++|.+++++|+++|++|+++||+||+|.++.+++ ...++..+....+++++++||||.+++||+|+||+++ +
T Consensus 176 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~---~ 249 (384)
T PRK06348 176 GAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIA---P 249 (384)
T ss_pred CcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecchhccCCccccceeeec---C
Confidence 999999999999999999999999999999998642 1222223222246899999999999999999999854 6
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++.+.. .......+++.++|.++..+|.+. .+++++.++.++++++++.+.|+ .++. +.+..+
T Consensus 250 ~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~r~~~~~~~L~-~~~~---~~~~~p 315 (384)
T PRK06348 250 DYIIETAKI----INEGICFSAPTISQRAAIYALKHR------DTIVPLIKEEFQKRLEYAYKRIE-SIPN---LSLHPP 315 (384)
T ss_pred HHHHHHHHH----HHHhccCCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHh-cCCC---ceeccC
Confidence 775555443 322223356788888888777643 34456788889999999999998 7631 466788
Q ss_pred CcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHH
Q 015283 354 QIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 354 ~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
++|+|+|+.+ + .+++..+++++||.+.||. ||+++. +++++++++++|+++
T Consensus 316 ~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 382 (384)
T PRK06348 316 KGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRIEKM 382 (384)
T ss_pred CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHHHhh
Confidence 8999999744 2 3456677777899999862 999975 889999999999865
No 28
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.9e-45 Score=351.42 Aligned_cols=340 Identities=18% Similarity=0.149 Sum_probs=267.1
Q ss_pred CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCC
Q 015283 32 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 110 (410)
Q Consensus 32 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g 110 (410)
.++++++|+.|.+ ..+ .++.+.+++.+.+.......|++..|.+++|+++++++.+.++..++++ +|++ |+|
T Consensus 27 ~~~~~~~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~--t~G 99 (383)
T TIGR03540 27 EGVDVISLGIGDP----DLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLS--LIG 99 (383)
T ss_pred cCCCeEEeCCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEE--CCC
Confidence 3468899999987 333 2678888887766443347798889999999999999987777777666 5888 899
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
+++++..+.. ..+.+||.|++++|+|+.|...++..|.+++.+++.+++++.+|++++++.+.+ +++++++++||
T Consensus 100 ~~~~l~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~---~~~~v~i~~P~ 174 (383)
T TIGR03540 100 SKEGIAHIPL--AFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK---KAKLMFINYPN 174 (383)
T ss_pred cHHHHHHHHH--HhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc---cceEEEEeCCC
Confidence 9999999843 336799999999999999999999999999999986555677899999888764 56777778999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||||.+++.+++++|+++|++||++||+||+|.++.+.+. ...++..+....+++++++||||.||++|+|+||++.
T Consensus 175 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~- 251 (383)
T TIGR03540 175 NPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG- 251 (383)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-
Confidence 9999999999999999999999999999999998876421 1222222222235789999999999999999999844
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
++++++++..... ....+++...|.++..+|.+. .+++++.++.++++++.+.+.|+ +.+ +.+
T Consensus 252 --~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~ 314 (383)
T TIGR03540 252 --NADLIAGLGKVKT----NVDSGVFQAIQYAAIAALNGP------QDVVKEIRKIYQRRRDLLLEALK-KIG----IDV 314 (383)
T ss_pred --CHHHHHHHHHHHH----hcccCCChHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHH-hCC----CEe
Confidence 7786666554322 222355667778877778764 23456778899999999999999 776 466
Q ss_pred ccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHH
Q 015283 351 ILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 351 ~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~ 404 (410)
..+.+++|+|+.+. .++..++++++||.+.|| + ||+++. +++++.+++++|++
T Consensus 315 ~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 315 EKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK 382 (383)
T ss_pred cCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence 77888999998652 445677777789999986 1 999975 78888888888764
No 29
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=2.3e-45 Score=352.20 Aligned_cols=366 Identities=16% Similarity=0.145 Sum_probs=275.2
Q ss_pred ccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 87 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia 87 (410)
|.++....++.+..+.+.... ..++++|+|+.|.| ..++ ++.+.+++.+.+.......|++..|.+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 78 (405)
T PRK09148 4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNP----DLPT-PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQA 78 (405)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCC----CCCC-CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHH
Confidence 444555555544444333321 23457899999987 3332 6778888777664433478998999999999999
Q ss_pred HHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283 88 ELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 166 (410)
Q Consensus 88 ~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 166 (410)
+++...+|..++++ +|++ |+|+++++.+++.. .+.+||+|++++|+|+.|...+...|.+++.+++.++..+
T Consensus 79 ~~~~~~~g~~~~~~~~I~i--t~G~~~al~~~~~~--l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~--- 151 (405)
T PRK09148 79 AYYARRFGVKLNPDTQVVA--TLGSKEGFANMAQA--ITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF--- 151 (405)
T ss_pred HHHHHHhCCCCCCCCcEEE--cCChHHHHHHHHHH--hcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC---
Confidence 99877667777787 8999 99999999998433 3679999999999999999999999999999998543333
Q ss_pred hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283 167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246 (410)
Q Consensus 167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 246 (410)
++++++.++...+++.++++++||||||.++|.+++++|+++|++|+++||+||+|.++.+++. ...++..+....+.
T Consensus 152 ~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~~~s~~~~~~~~~~ 229 (405)
T PRK09148 152 FPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN--PPPSVLQVPGAKDV 229 (405)
T ss_pred ccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCC--CCCChhhCCCccCc
Confidence 3445555543334677888899999999999999999999999999999999999999886421 11122222122346
Q ss_pred EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 326 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 326 (410)
+++++||||.+|+||+|+||++. ++++++++.... .....+++.+.|.++..+|.+. .+++++.++.
T Consensus 230 ~i~~~SfSK~~~~pGlR~G~~v~---~~~~i~~l~~~~----~~~~~~~~~~~q~~~~~~L~~~------~~~~~~~~~~ 296 (405)
T PRK09148 230 TVEFTSMSKTFSMAGWRMGFAVG---NERLIAALTRVK----SYLDYGAFTPIQVAATAALNGP------QDCIAEMREL 296 (405)
T ss_pred EEEEeccccccCCcchheeeeeC---CHHHHHHHHHHH----HHhccCCChHHHHHHHHHHhCc------HHHHHHHHHH
Confidence 88999999999999999999854 788666655432 2222345677888888888753 2446788899
Q ss_pred HHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC--------HHHHHHhhhcCcEEEcCCC----------eEEec
Q 015283 327 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLA 388 (410)
Q Consensus 327 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ll~~~gi~v~~~g----------Ris~~ 388 (410)
++++++.+.+.|+ +.+ +.+..|++|+|+|+.+. .+++..++++.||.+.||. ||+++
T Consensus 297 ~~~~r~~l~~~L~-~~~----~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~ 371 (405)
T PRK09148 297 YKKRRDVLVESFG-RAG----WDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV 371 (405)
T ss_pred HHHHHHHHHHHHH-HcC----CccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec
Confidence 9999999999998 776 45667889999998652 3456777777899999961 99997
Q ss_pred CCCcccHHHHHHHHHHHhhh
Q 015283 389 GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 389 ~~~~~~i~~~~~~l~~~l~~ 408 (410)
. +.+++.+++++|.+++..
T Consensus 372 ~-~~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 372 E-NEQRIRQAARNIKRFLSS 390 (405)
T ss_pred C-CHHHHHHHHHHHHHHHHH
Confidence 5 889999999999998765
No 30
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.1e-45 Score=351.89 Aligned_cols=354 Identities=15% Similarity=0.206 Sum_probs=275.9
Q ss_pred HhhhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhc----------c-CCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283 27 AFKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE----------R-GENKEYLPIEGLAAFNKVTAELLFGAD 94 (410)
Q Consensus 27 ~~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~----------~-~~~~~y~~~~g~~~lr~aia~~~~~~~ 94 (410)
.++...|| ++|+|+.+++ ..+.+.+.+.+.+... . .+...|.+..|.++||+++|+++.+.+
T Consensus 39 ~~~~~~np~g~i~l~~aeN------~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~ 112 (447)
T PLN02607 39 PYDESHNPSGVIQMGLAEN------QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIR 112 (447)
T ss_pred CCCcccCCCceEEEechhh------hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhc
Confidence 34444566 6999999886 4445666666655432 1 122447788999999999999998766
Q ss_pred C--CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHH
Q 015283 95 N--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 95 ~--~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~ 171 (410)
+ ..+++++|++ |+|++++++++.. ..+.|||.|+++.|+|+.|...+. ..|++++.+++...+++.+|++.++
T Consensus 113 ~~~~~v~p~~Ivi--t~G~t~al~~l~~--~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le 188 (447)
T PLN02607 113 GGKARFDPDRIVL--TAGATAANELLTF--ILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALE 188 (447)
T ss_pred CCCCCcCHHHeEE--cCChHHHHHHHHH--HhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHH
Confidence 5 3578899999 9999999999843 336799999999999999988777 6799999998865567889999999
Q ss_pred HHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh------
Q 015283 172 ADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------ 242 (410)
Q Consensus 172 ~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------ 242 (410)
+.+++. +.++++++++|||||||.++|.+++++|+++|++|+++||+||+|..+.+.+ .+..++..+..
T Consensus 189 ~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~--~~f~S~~s~~~~~~~~~ 266 (447)
T PLN02607 189 AAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA--SEFVSVAEIVEARGYKG 266 (447)
T ss_pred HHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCcccHHHHHhhcCCCC
Confidence 887641 3356777889999999999999999999999999999999999999877642 12223333221
Q ss_pred cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283 243 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 243 ~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 322 (410)
..+++++++||||.||++|+|+||+ ++.++++.+.+.. .. .+..++.+.|.++..+|++.++. .+++.+
T Consensus 267 ~~~~v~vi~s~SK~fg~~GlRvG~i--vs~n~~l~~~~~~----~~--~~~~~s~~~q~~~~~~L~d~~~~---~~~l~~ 335 (447)
T PLN02607 267 VAERVHIVYSLSKDLGLPGFRVGTI--YSYNDKVVTTARR----MS--SFTLVSSQTQHLLASMLSDEEFT---ENYIRT 335 (447)
T ss_pred CcCcEEEEEcchhcCCCCcceEEEE--EEcCHHHHHHHHH----Hh--hcCCCCHHHHHHHHHHhCCchhH---HHHHHH
Confidence 1458999999999999999999998 4456664443322 21 23356778899999999997764 245678
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCH-----------HHHHHhhhcCcEEEcCCC--------
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK-----------AQSDNMTNKWHVYMTKDG-------- 383 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gi~v~~~g-------- 383 (410)
.+++++++++.+.+.|+ +.| +.+..+++|+|+|+++.. +++.++++++||.+.||.
T Consensus 336 ~r~~l~~~~~~~~~~L~-~~g----i~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g 410 (447)
T PLN02607 336 NRERLRKRYEMIVQGLR-RAG----IECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPG 410 (447)
T ss_pred HHHHHHHHHHHHHHHHH-hCC----CCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCC
Confidence 89999999999999999 877 467788999999997621 235577777899999972
Q ss_pred --eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 384 --RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 384 --Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
||+|+..+++++++++++|.+++++
T Consensus 411 ~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 411 WFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred EEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 9999977899999999999999865
No 31
>PLN02231 alanine transaminase
Probab=100.00 E-value=6.9e-45 Score=355.84 Aligned_cols=355 Identities=15% Similarity=0.134 Sum_probs=270.7
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
.+++|+++.|.+ .+ |..+++...+.+.. + ....|++..|.+++|+++++++.+.+|..+++++|++ |+
T Consensus 128 ~p~~i~~~~~~~----~f---p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T~ 198 (534)
T PLN02231 128 HPSLLDKSETHG----LF---SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--TD 198 (534)
T ss_pred CCccCCCCCccc----cC---CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--eC
Confidence 467888885543 33 34555444445432 2 2467999999999999999999888888899999999 99
Q ss_pred ChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEE
Q 015283 110 SGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 185 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii 185 (410)
|+++++.++..++ +. +||.|+++.|+|+.|...+...|.+++.+++.++++|++|++++++.+++. ..++++++
T Consensus 199 Ga~~ai~~~~~~l--~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 199 GASPAVHMMMQLL--IRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CHHHHHHHHHHHh--ccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999999984333 54 799999999999999999999999999999865667999999999988652 12467777
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh------cCCcEEEEecccccc-c
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------RGMELLVAQSYSKNL-G 258 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~S~sK~~-~ 258 (410)
++|||||||.++|.+++++|+++|++||++||+||+|.++.+.+. ....++..+.. ...++++++||||.+ |
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g 355 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG 355 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCccccc
Confidence 789999999999999999999999999999999999999987421 12223333321 122689999999975 8
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKL 334 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l 334 (410)
++|+|+||+++...++++++++.+.. . ...+++..+|.++..+++.. .....+.++..++++.++++++.+
T Consensus 356 ~pGlRiGy~~~~~~~~~l~~~l~k~~----~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l 430 (534)
T PLN02231 356 ECGKRGGYMEVTGFTSDVREQIYKVA----S-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTL 430 (534)
T ss_pred CCccceEEEEEecCCHHHHHHHHHHH----h-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999854333677666665432 1 22345566777777777642 122334445567788999999999
Q ss_pred HHHhhhccCCCCCcccccCCcceeeecCC--CH---------------HHHHHhhhcCcEEEcCCC-----------eEE
Q 015283 335 FDSLSAKDKSGKDWSFILRQIGMFSFTGL--NK---------------AQSDNMTNKWHVYMTKDG-----------RIS 386 (410)
Q Consensus 335 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~---------------~~~~~ll~~~gi~v~~~g-----------Ris 386 (410)
.+.|+ ++. + +.+.+|++++|+|+.+ .. .++.+++++.||.++||. |++
T Consensus 431 ~~~L~-~~~--g-i~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit 506 (534)
T PLN02231 431 EDALN-SLE--G-VTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT 506 (534)
T ss_pred HHHHh-cCC--C-ceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE
Confidence 99998 772 1 5788899999999543 21 134668888899999972 899
Q ss_pred ecCCCcccHHHHHHHHHHHhhhc
Q 015283 387 LAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 387 ~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
++. +++++++++++|+++++++
T Consensus 507 ~~~-~~e~l~eal~RL~~~~~~~ 528 (534)
T PLN02231 507 ILP-QEDKIPAIVSRLTEFHKSF 528 (534)
T ss_pred eCC-CHHHHHHHHHHHHHHHHHH
Confidence 965 8899999999999987653
No 32
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.7e-45 Score=350.73 Aligned_cols=361 Identities=17% Similarity=0.212 Sum_probs=280.0
Q ss_pred cccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283 9 RFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 86 (410)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai 86 (410)
+.+++...+++.+..+.....+ ..++++++|+.|.+ ..+ .++.+.+++.+.+.... ..|++..|.+++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~i 76 (388)
T PRK07337 3 LAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEP----DFT-APEPVVEAAARALRRGV-TQYTSALGLAPLREAI 76 (388)
T ss_pred hhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHH
Confidence 3455555565544444433332 23467899999987 332 26788888887765443 6798888999999999
Q ss_pred HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283 87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 166 (410)
Q Consensus 87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 166 (410)
++++...++..+++++|++ |+|+++++.++.. ..+.+||+|++++|+|+.+...++..|++++.+++.+++++.+|
T Consensus 77 a~~~~~~~~~~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (388)
T PRK07337 77 AAWYARRFGLDVAPERIVV--TAGASAALLLACL--ALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLT 152 (388)
T ss_pred HHHHHHHhCCCCChHhEEE--ecCcHHHHHHHHH--HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCC
Confidence 9998877788788999999 9999999998743 34679999999999999999999999999999998545578899
Q ss_pred hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283 167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246 (410)
Q Consensus 167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 246 (410)
++++++.+.+ +++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+.+. ..+ .....++
T Consensus 153 ~~~l~~~~~~---~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~---~~~~~~~ 223 (388)
T PRK07337 153 AADVEAAWGE---RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA---PVS---ALSLGDD 223 (388)
T ss_pred HHHHHhhcCc---cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC---CcC---hhhccCC
Confidence 9999998864 667777899999999999999999999999999999999999999886421 111 1223467
Q ss_pred EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 326 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 326 (410)
+++++||||.+|++|+|+||+++ ++++++++..... ....+++...|.++..++.++.. +..++.++.
T Consensus 224 vi~~~S~SK~~~~~G~RiG~~~~---~~~l~~~l~~~~~----~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~ 291 (388)
T PRK07337 224 VITINSFSKYFNMTGWRLGWLVV---PEALVGTFEKLAQ----NLFICASALAQHAALACFEPDTL-----AIYERRRAE 291 (388)
T ss_pred EEEEEechhhcCCchhheeeeec---CHHHHHHHHHHHH----HhccCCChHHHHHHHHHhccCch-----HHHHHHHHH
Confidence 99999999999999999999854 6776565544322 22335677788888777765432 224677889
Q ss_pred HHHHHHHHHHHhhhccCCCCCccc-ccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCC---------C--e
Q 015283 327 IKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKD---------G--R 384 (410)
Q Consensus 327 ~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~---------g--R 384 (410)
++++++.+.+.|+ +.+ +.. ..|.+|+|+|+.+. .+++.++++++||.+.|| + |
T Consensus 292 ~~~~r~~~~~~L~-~~~----~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~R 366 (388)
T PRK07337 292 FKRRRDFIVPALE-SLG----FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIR 366 (388)
T ss_pred HHHHHHHHHHHHH-hcC----CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEE
Confidence 9999999999998 776 232 46788999998652 245677787789999885 1 9
Q ss_pred EEecCCCcccHHHHHHHHHHHh
Q 015283 385 ISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 385 is~~~~~~~~i~~~~~~l~~~l 406 (410)
|+++. +++++.+++++|.+++
T Consensus 367 i~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 367 LSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred EEecC-CHHHHHHHHHHHHHHh
Confidence 99987 7899999999998875
No 33
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.7e-45 Score=353.34 Aligned_cols=353 Identities=15% Similarity=0.170 Sum_probs=267.1
Q ss_pred CCC-CeeeeeeeeeecCCCcccccHHHHHHHHHh------hcc-CCCccCcCCcccHHHHHHHHHHhcCCCC--CcccCC
Q 015283 32 TDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLM------LER-GENKEYLPIEGLAAFNKVTAELLFGADN--SVLKEQ 101 (410)
Q Consensus 32 ~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~------~~~-~~~~~y~~~~g~~~lr~aia~~~~~~~~--~~~~~~ 101 (410)
.+| ++|+|+.+++ ...+..+++.+++..... +.. .....|.+..|.+++|+++++++.+.+| ..++++
T Consensus 43 ~np~g~i~l~~aEN--~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe 120 (496)
T PLN02376 43 RNPHGIIQMGLAEN--QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE 120 (496)
T ss_pred cCCCceEEeecchh--hhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh
Confidence 345 6899999886 111122233443332211 101 1225588889999999999999987766 567899
Q ss_pred ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHHHHHhc---C
Q 015283 102 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA---A 177 (410)
Q Consensus 102 ~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~ 177 (410)
+|++ |+|+++++++++ ...+.|||.|++++|+|+.|...+. ..|++++.+++..++++++|++.+++.+.. .
T Consensus 121 ~Ivi--t~Ga~~al~~l~--~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~ 196 (496)
T PLN02376 121 RVVM--SGGATGANETIM--FCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQES 196 (496)
T ss_pred hEEE--ccchHHHHHHHH--HHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhc
Confidence 9999 999999999984 3347799999999999999998887 689999999986556788999999766432 1
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-------CCcEEEE
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-------GMELLVA 250 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~ 250 (410)
..++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+.+ .+..++..+... .+.++++
T Consensus 197 ~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~--~~~~si~~l~~~~~~~~~~~~~v~vv 274 (496)
T PLN02376 197 NKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG--GDFVSVAEVVNDVDISEVNVDLIHIV 274 (496)
T ss_pred CCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC--CCcccHHHhhccccccccCCCeEEEE
Confidence 2356777789999999999999999999999999999999999999988643 222333333221 1356779
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
+||||.||+||+|+||+ ++.++.+.+.+ .... .....+.+.|.++..+|+++++. .+++.+.+++++++
T Consensus 275 ~S~SK~~glpGlRvG~l--i~~~~~l~~~~----~~~~--~~~~vs~~~Q~a~~~~L~d~~~~---~~~l~~~r~~l~~r 343 (496)
T PLN02376 275 YSLSKDMGLPGFRVGIV--YSFNDSVVSCA----RKMS--SFGLVSSQTQLMLASMLSDDQFV---DNFLMESSRRLGIR 343 (496)
T ss_pred EeccccCCCCcceEEEE--EECCHHHHHHH----HHHh--hcCCCCHHHHHHHHHHhCChhHH---HHHHHHHHHHHHHH
Confidence 99999999999999998 44455533332 2211 22346788899999999987653 45567889999999
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecCCC------------HHHHHHhhhcCcEEEcCCC----------eEEec
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG----------RISLA 388 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ll~~~gi~v~~~g----------Ris~~ 388 (410)
++.+.+.|+ +.+ +.+..+.+|+|+|+++. .+++..++++.||.+.||. ||+++
T Consensus 344 ~~~l~~~L~-~~g----i~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa 418 (496)
T PLN02376 344 HKVFTTGIK-KAD----IACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFA 418 (496)
T ss_pred HHHHHHHHH-HCC----CcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEee
Confidence 999999998 776 46777899999999762 2345567777899999972 99999
Q ss_pred CCCcccHHHHHHHHHHHhhh
Q 015283 389 GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 389 ~~~~~~i~~~~~~l~~~l~~ 408 (410)
..+++++++++++|++++.+
T Consensus 419 ~~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 419 NMDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 76889999999999998853
No 34
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=6.5e-45 Score=349.47 Aligned_cols=366 Identities=13% Similarity=0.161 Sum_probs=280.9
Q ss_pred CCcccchhHhhhcCC--CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCC
Q 015283 19 DPILGVSEAFKADTD--EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 96 (410)
Q Consensus 19 ~~~~~~~~~~~~~~~--~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~ 96 (410)
+++.++.+.++.+.. .++++|+.|.| +..+....++.+.+++.+.+.......|.+..|.+++|+++++++.+. +.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~ 91 (401)
T TIGR01264 14 NPIRAIVDNMKVKPNPEKPMIKLSIGDP-TVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DG 91 (401)
T ss_pred hHHHHHHHHHHhhhhcCCCeeecCCCCC-CCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CC
Confidence 445566666666543 46799999998 322222336888888888765543367989999999999999998753 55
Q ss_pred cccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283 97 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 97 ~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
.+++++|++ |+|+++++.++.. ..+.+||+|++++|+|..|...++..|.+++.+++..++++++|++.+++.+++
T Consensus 92 ~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~ 167 (401)
T TIGR01264 92 PIEADDVVL--CSGCSHAIEMCIA--ALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE 167 (401)
T ss_pred CCCHHHEEE--CcChHHHHHHHHH--HhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc
Confidence 677899999 9999999999843 336799999999999999999999999999999885455688999999988865
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283 177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 256 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 256 (410)
++.++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+.+. ...++..+. ...++++++||||.
T Consensus 168 ---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~vi~~~SfSK~ 241 (401)
T TIGR01264 168 ---KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA--TFEPLASLS-STVPILSCGGLAKR 241 (401)
T ss_pred ---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--ccccHHHcC-CCCcEEEEccCccc
Confidence 456777899999999999999999999999999999999999999986431 222332322 22358999999999
Q ss_pred ccccCCCcceEEEEeCCc-hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 257 LGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 257 ~~~~G~r~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
|+++|+|+||+++ .++ .....+...+..... ...+++.+.|.++..+|.+. . .+++++.++.++++++.+.
T Consensus 242 ~~~~GlRiG~iv~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-~----~~~l~~~~~~~~~~r~~l~ 313 (401)
T TIGR01264 242 WLVPGWRLGWIII--HDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT-P----QEYFDGTLSVLESNAMLCY 313 (401)
T ss_pred CCCccceEEEEEe--cCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC-c----HHHHHHHHHHHHHHHHHHH
Confidence 9999999999854 321 222334343433322 22356777888888888652 1 3456788899999999999
Q ss_pred HHhhhccCCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHH
Q 015283 336 DSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEY 397 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~ 397 (410)
+.|+ +++ + +.+..|++|+|+|+.+. .+++.++++++||.+.||. ||+++. +++++++
T Consensus 314 ~~L~-~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~ 388 (401)
T TIGR01264 314 GALA-AVP--G-LRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEE 388 (401)
T ss_pred HHHH-hCC--C-CcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHH
Confidence 9998 773 1 46667889999998742 3456777767899999873 999987 7899999
Q ss_pred HHHHHHHHhhhc
Q 015283 398 LADAIIDSYHNV 409 (410)
Q Consensus 398 ~~~~l~~~l~~~ 409 (410)
++++|.+.++++
T Consensus 389 ~l~rl~~~~~~~ 400 (401)
T TIGR01264 389 ACSRIQEFCERH 400 (401)
T ss_pred HHHHHHHHHhcc
Confidence 999999998764
No 35
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-45 Score=349.88 Aligned_cols=344 Identities=18% Similarity=0.181 Sum_probs=275.8
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
++++++|+.|.| ..+ .++.+.+++.+.+.... .+|.+..|.+++|+++++++.+.++..+++++|++ |+|++
T Consensus 32 ~~~~i~l~~g~p----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G~~ 103 (402)
T PRK06107 32 GRSIVDLTVGEP----DFD-TPDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITV--GGGAK 103 (402)
T ss_pred cCCEEEcCCCCC----CCC-CCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCCHH
Confidence 467899999998 333 26788888888775443 67999999999999999998877788788899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++..+. ...+.+||.|++++|+|..|...+...+.+++.+++.+++++.+|++.+++.+.+ +++++++++|+||
T Consensus 104 ~al~~~~--~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP 178 (402)
T PRK06107 104 QAIFLAL--MATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP---RTRWLILNAPSNP 178 (402)
T ss_pred HHHHHHH--HHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc---CceEEEEECCCCC
Confidence 9999984 3447799999999999999998888888888888874455678999999988864 5666777899999
Q ss_pred CCCCCCHHHHHHHHHHHHHc-CCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEEE
Q 015283 193 TGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||.++|.+++++++++|+++ ++++|+||+|.++.+.+. ...++..+.. ..+++++++||||.|++||+|+||++.
T Consensus 179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~- 255 (402)
T PRK06107 179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG- 255 (402)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-
Confidence 99999999999999999998 999999999998876431 1222323222 235899999999999999999999854
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
++++++.+.... .....+++.+.|.++..+|.+. .+++++.++.++++++.+.+.|+ +.+. +.+
T Consensus 256 --~~~~~~~~~~~~----~~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~g---~~~ 319 (402)
T PRK06107 256 --PADLIAAINKLQ----SQSSSCPSSISQAAAAAALNGD------QSFVTESVAVYKQRRDYALALLN-AIPG---LSC 319 (402)
T ss_pred --CHHHHHHHHHHH----HhcccCCChHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHHHHHHHh-cCCC---Ccc
Confidence 777666554432 2233467888899998888643 23457888899999999999998 7631 567
Q ss_pred ccCCcceeeecCC---------------C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHh
Q 015283 351 ILRQIGMFSFTGL---------------N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 351 ~~~~~~~~~~~~~---------------~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
.++.+|+|+|+.+ + .+++.++++++||.+.||. ||+++. +++++++++++|++++
T Consensus 320 ~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~~~l 398 (402)
T PRK06107 320 LVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACARIERAV 398 (402)
T ss_pred cCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 7889999999754 1 2456788888899999983 999997 8999999999999998
Q ss_pred hhc
Q 015283 407 HNV 409 (410)
Q Consensus 407 ~~~ 409 (410)
+++
T Consensus 399 ~~~ 401 (402)
T PRK06107 399 AAL 401 (402)
T ss_pred Hhc
Confidence 764
No 36
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-45 Score=347.89 Aligned_cols=341 Identities=15% Similarity=0.125 Sum_probs=268.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc-ccCC-ceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQ-RVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~-~~~~-~i~~~~t~gg 111 (410)
.++|+|+.|.+ ... .++.+.+++.+.+.......|+ ..|.+++|+++++++...+|.. ++++ +|++ |+|+
T Consensus 44 ~~~i~L~~g~p----~~~-~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i--t~Gs 115 (410)
T PRK06290 44 MELIDMGVGEP----DEM-ADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIH--SIGS 115 (410)
T ss_pred CCeEEcCCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEE--ccCH
Confidence 36899999997 322 2577888877655433335685 5899999999999997777776 7786 7999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++..+.. ..+.+||.|++++|+|+.|...++..|++++.+++.++.++.+|++.+++.+.+ +++++++++|||
T Consensus 116 ~~al~~~~~--~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~nP~N 190 (410)
T PRK06290 116 KPALAMLPS--CFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE---KAKLLYLNYPNN 190 (410)
T ss_pred HHHHHHHHH--HhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc---cceEEEEECCCC
Confidence 999998743 336799999999999999999999999999999986555688899999888864 567788789999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.++|.+++++|+++|++|+++||+||+|.++.+++. ..++..+....+++|+++||||.+|++|+|+||++.
T Consensus 191 PTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~---~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-- 265 (410)
T PRK06290 191 PTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK---PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-- 265 (410)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC---CcChhcCCCccccEEEEeechhhcCCchhheEeEEe--
Confidence 999999999999999999999999999999999876421 112222222335789999999999999999999854
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++.+.... .....+++.++|.++..+|.+.++ +++.+++++++++.+.+.|+ +.| +.+.
T Consensus 266 -~~~l~~~l~~~~----~~~~~~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g----~~~~ 328 (410)
T PRK06290 266 -NELIVKAFATVK----DNNDSGQFIAIQKAGIYALDHPEI-------TEKIREKYSRRLDKLVKILN-EVG----FKAE 328 (410)
T ss_pred -CHHHHHHHHHHH----hccccCCcHHHHHHHHHHhhCcHH-------HHHHHHHHHHHHHHHHHHHH-hCC----Ceec
Confidence 778666554432 222335566788888888876532 46778889999999999998 876 4667
Q ss_pred cCCcceeeecCCC------------HHHHHHhhhcCcEEEcCCC------eEEecC--CCcccHHHHHHHHHHHhhhc
Q 015283 352 LRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG------RISLAG--LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 352 ~~~~~~~~~~~~~------------~~~~~~ll~~~gi~v~~~g------Ris~~~--~~~~~i~~~~~~l~~~l~~~ 409 (410)
++++++|+|+.+. .++++.|+++.++.+.|+. ||+++. .++++.+++++.|++.|..+
T Consensus 329 ~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 329 MPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 7889999997542 2457788887677777752 999984 27889999999999988654
No 37
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-44 Score=317.53 Aligned_cols=366 Identities=15% Similarity=0.139 Sum_probs=297.4
Q ss_pred CCcccchhHhhhc--CC--CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283 19 DPILGVSEAFKAD--TD--EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD 94 (410)
Q Consensus 19 ~~~~~~~~~~~~~--~~--~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~ 94 (410)
.++..+...+... ++ +++|.|+.|+| +..+.-...+.+.+|+.+.+.++..++|.|..|....|+++|+|+.+..
T Consensus 42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDP-sv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l 120 (447)
T KOG0259|consen 42 VTIRGILSALFDCCDPEKKKPILPLGHGDP-SVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDL 120 (447)
T ss_pred ccHHHHHHHHhhcCCcccCceeccCCCCCC-CccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCC
Confidence 4455555444432 22 37899999999 4444444578999999999988777999999999999999999987777
Q ss_pred CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283 95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 174 (410)
Q Consensus 95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 174 (410)
...+++++|.+ |+|.++|++++...+ -.||..|++|.|+|+-|...+...|.+++.+.+.++++|.+|++.+++++
T Consensus 121 ~~kl~a~DV~l--tsGC~qAIe~~i~~L--A~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~ 196 (447)
T KOG0259|consen 121 PNKLTADDVVL--TSGCSQAIELAISSL--ANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALA 196 (447)
T ss_pred CCccCcCceEE--eccchHHHHHHHHHh--cCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhh
Confidence 77788999999 999999999984333 56999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc
Q 015283 175 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 254 (410)
Q Consensus 175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 254 (410)
.+ +|+++++.||+||+|.++|.+.|++|+++|++++++||.||+|.++.|++ .+..+...+. .---+++++|.|
T Consensus 197 DE---NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~fs-siVPVitlggis 270 (447)
T KOG0259|consen 197 DE---NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKFS-SIVPVITLGGIS 270 (447)
T ss_pred cc---CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhcc-ccCceEeecccc
Confidence 87 89999999999999999999999999999999999999999999999864 3343333332 223789999999
Q ss_pred ccccccCCCcceEEEEeCCch-hHH--HHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 255 KNLGLYAERIGAMNVVCSSSD-LAA--RVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 255 K~~~~~G~r~G~l~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
|-|-.||||+||++ ..++. +.. ++.+.+.+... ...+|+.+.|.|+-.+|.... ++.+......++.+.
T Consensus 271 KrW~VPGWRlGWi~--~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp-----~efF~k~~~~lk~na 342 (447)
T KOG0259|consen 271 KRWIVPGWRLGWIA--LHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTP-----EEFFDKKLSFLKSNA 342 (447)
T ss_pred cccccCCceeeeEE--EecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhCh-----HHHHHHHHHHHHhhH
Confidence 99999999999994 33433 211 11123333322 356788999999888887542 455678889999999
Q ss_pred HHHHHHhhhccCCCCCcc-cccCCcceeeecCC----------CHHHHHHhhhcCcEEEcCCC--------eEEecCCCc
Q 015283 332 QKLFDSLSAKDKSGKDWS-FILRQIGMFSFTGL----------NKAQSDNMTNKWHVYMTKDG--------RISLAGLSL 392 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~ 392 (410)
+...+.|+ +++. +. ...|.+.+|+|+++ +-+++.+|.+|..+++.||. |+++.. +.
T Consensus 343 ~l~y~~Lk-~IP~---l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~ 417 (447)
T KOG0259|consen 343 DLCYSRLK-DIPC---LTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EE 417 (447)
T ss_pred HHHHHHHh-cCCC---cccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-Ch
Confidence 99999999 8863 44 67899999999865 45688999999999999983 999976 88
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
+.++++++||++...+
T Consensus 418 ~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 418 EMLEEAFSRIKEFCDR 433 (447)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988654
No 38
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-44 Score=346.07 Aligned_cols=366 Identities=18% Similarity=0.200 Sum_probs=279.1
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
.++++..++..+..+...... .+++++|+.|.+ ..+ +++.+.+++.+.........|.+..|.+++|++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~g~~----~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~ 77 (389)
T PRK05957 5 TSRMDAVQSPIIPVVGQLIRE--NPGTISLGQGVV----SYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQK 77 (389)
T ss_pred hHHHHhcCCcHHHHHHHHHHh--CCCeEEccCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Confidence 344544454433222223322 256899999997 333 3688888888776443336798899999999999999
Q ss_pred hcCCCCCccc-CCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283 90 LFGADNSVLK-EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 168 (410)
Q Consensus 90 ~~~~~~~~~~-~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 168 (410)
+....+..++ +++|++ |+|+++++..+. ...+.+||.|++++|+|..+...++..|++++.++. ++++.+|++
T Consensus 78 l~~~~g~~~~~~~~i~~--t~G~~~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~ 151 (389)
T PRK05957 78 LQQDNGIELNNEQAIVV--TAGSNMAFMNAI--LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT--DDNYQLQPE 151 (389)
T ss_pred HHHHhCCCCCCCCeEEE--eCChHHHHHHHH--HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec--CCCCCcCHH
Confidence 8777777666 678999 999999998873 334679999999999999998888999999999987 456789999
Q ss_pred hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283 169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248 (410)
Q Consensus 169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (410)
++++.+++ +++++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+.. ..+.....+...+++
T Consensus 152 ~l~~~i~~---~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~--~~~~~~~~~~~~~~i 226 (389)
T PRK05957 152 AIEQAITP---KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVK--HFSPGSIPGSGNHTI 226 (389)
T ss_pred HHHHhcCc---CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCC--ccChhhCCCccCcEE
Confidence 99998865 5777778999999999999999999999999999999999999999865311 112222223446899
Q ss_pred EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
+++||||.+|++|+|+||+++ ++++++++.... .....+++...|.++...|.++. +++++.+++++
T Consensus 227 ~~~S~SK~~g~~GlRiG~~~~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~ 293 (389)
T PRK05957 227 SLYSLSKAYGFASWRIGYMVI---PIHLLEAIKKIQ----DTILICPPVVSQYAALGALQVGK------SYCQQHLPEIA 293 (389)
T ss_pred EEecchhhccCccceeEEEec---CHHHHHHHHHHH----hhcccCCCcHHHHHHHHHHhCCh------HHHHHHHHHHH
Confidence 999999999999999999854 777666655432 22234567788888888887642 22356667789
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcc
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLA 393 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~ 393 (410)
++++.+.+.|+ +++. .+.+.++++++|+|+.+ + .++++++++++||.+.||. ||+++..+++
T Consensus 294 ~~r~~l~~~L~-~~~~--~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~ 370 (389)
T PRK05957 294 QVRQILLKSLG-QLQD--RCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKA 370 (389)
T ss_pred HHHHHHHHHHH-hcCC--CccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHH
Confidence 99999999998 7641 12556788899998754 3 3567788777899999961 9999876889
Q ss_pred cHHHHHHHHHHHhhhc
Q 015283 394 KCEYLADAIIDSYHNV 409 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~~ 409 (410)
++++++++|.+.++++
T Consensus 371 ~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 371 TAKEGIERLVQGLKTI 386 (389)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988764
No 39
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.8e-45 Score=347.25 Aligned_cols=340 Identities=17% Similarity=0.170 Sum_probs=262.4
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCc-eEEEecCCh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLSG 111 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~-i~~~~t~gg 111 (410)
++++++|+.|.| ..+ .++.+.+++.+.+.......|++..|.++||+++++++...++..+++++ |++ |+|+
T Consensus 34 g~~~i~l~~g~p----~~~-~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v--t~G~ 106 (394)
T PRK05942 34 GLDLIDLGMGNP----DGA-APQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP--LLGS 106 (394)
T ss_pred CCCeEEcCCCCC----CCC-CCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE--ccCh
Confidence 356899999987 222 25556666555543332377998999999999999998776677777874 888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++..+. ...+.+||+|++++|+|+.+...+...|++++.+++..+++|.+|++++++.+.+ +++++++++|||
T Consensus 107 ~~al~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~~P~N 181 (394)
T PRK05942 107 KEGLTHLA--LAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ---QAKILYFNYPSN 181 (394)
T ss_pred HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc---cceEEEEcCCCC
Confidence 99999984 3347799999999999999998888999999999985455678999999988864 677888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.++|.+++++|+++|+++|++||+||+|.++.+.+. ...++..+....+.+++++||||.||++|+|+||+++
T Consensus 182 PtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-- 257 (394)
T PRK05942 182 PTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-- 257 (394)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCCccccEEEEecchhccCChhhheeeeec--
Confidence 999999999999999999999999999999998886421 1122222222234678999999999999999999854
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++++..... ....+++..+|.++..+|+.. .+++++.+++++++++++.+.|+ +.+ +.+.
T Consensus 258 -~~~l~~~l~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~ 321 (394)
T PRK05942 258 -NRHIIQGLRTLKT----NLDYGIFSALQKAAETALQLP------DSYLQQVQERYRTRRDFLIQGLG-ELG----WNIP 321 (394)
T ss_pred -CHHHHHHHHHHHh----hcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Ceec
Confidence 7786666554322 222345667778777777532 34567888999999999999998 776 4667
Q ss_pred cCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHH
Q 015283 352 LRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 352 ~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
.+++++|+|+.+ + .+++.++++++||.+.||. ||+++. +.+.+.+++++|+++
T Consensus 322 ~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 322 PTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA 389 (394)
T ss_pred CCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 788999999865 2 3456678877899998851 999975 667777777777664
No 40
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-44 Score=346.61 Aligned_cols=342 Identities=18% Similarity=0.191 Sum_probs=273.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+++++|+.|++ ..++ ++.+.+++.+.+.... ..|++..|.+++|+++++++.+.++..+++++|++ |+|+++
T Consensus 24 ~~~i~l~~g~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~~ 95 (382)
T PRK06108 24 EGVLPLWFGES----DLPT-PDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSGVQ 95 (382)
T ss_pred CCeEEecCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCChHH
Confidence 57899999998 3333 6889998888775543 56988899999999999998777777788899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
++..+.. ..+.+||+|++++|+|+.+...++..|++++.+++..+ ++|.+|++.+++.+.+ +++++++++|+||
T Consensus 96 al~~~~~--~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~i~l~~p~NP 170 (382)
T PRK06108 96 ALMLAAQ--ALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP---RTRALFINSPNNP 170 (382)
T ss_pred HHHHHHH--HhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc---cceEEEEECCCCC
Confidence 9998743 33679999999999999999999999999999998542 4577999999988864 5677777899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++|+++|+++|+||+|.++.+++ .....++..+....+++++++||||.||++|+|+||+++
T Consensus 171 tG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~--- 246 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA--- 246 (382)
T ss_pred CCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC---
Confidence 9999999999999999999999999999999998641 111222222233346899999999999999999999855
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++++.... ...+.+++.+.|.++...|.+. .+++++.+++++++++.+.+.|+ +... +.+..
T Consensus 247 ~~~~~~~~~~~~----~~~~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~ 312 (382)
T PRK06108 247 PPALGQVLEKLI----EYNTSCVAQFVQRAAVAALDEG------EDFVAELVARLRRSRDHLVDALR-ALPG---VEVAK 312 (382)
T ss_pred CHHHHHHHHHHH----HhcccCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hCCC---CcccC
Confidence 777666655432 2234467788888888888754 23456788889999999999998 7631 56777
Q ss_pred CCcceeeecCC----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 353 RQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 353 ~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
+++++|+|+.+ + .+++.++++++||.+.|| + |||++. +++++++++++|+++++
T Consensus 313 p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 313 PDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred CCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 88999999865 2 356777877789999885 1 999998 99999999999999875
No 41
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-44 Score=346.20 Aligned_cols=363 Identities=15% Similarity=0.163 Sum_probs=275.4
Q ss_pred chhHhhh-cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC------CC
Q 015283 24 VSEAFKA-DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD------NS 96 (410)
Q Consensus 24 ~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~------~~ 96 (410)
..+.+.. ..++++|+|+.|.| +....-.+++.+.+++.+.+.......|++..|.++||+++++++...+ +.
T Consensus 22 ~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~ 100 (412)
T PTZ00433 22 VTDNAKPSPSPKSIIKLSVGDP-TLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKS 100 (412)
T ss_pred HHHhhccCCCCCCeeecCCcCC-CCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccC
Confidence 3344444 34568999999998 2111012368888888887654334779888899999999999987543 45
Q ss_pred cccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283 97 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 97 ~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
.+++++|++ |+|+++++.++.. ..+.+||+|++++|+|..|...++..|++++.+++.+++++++|++++++.+++
T Consensus 101 ~~~~~~i~i--t~G~~~al~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~ 176 (412)
T PTZ00433 101 TIKKDNVVL--CSGVSHAILMALT--ALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD 176 (412)
T ss_pred CCChhhEEE--eCChHHHHHHHHH--HhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc
Confidence 678899999 9999999999843 346799999999999999999999999999999986556789999999988765
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283 177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 256 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 256 (410)
++.++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+.+. ...++..+. ...++++++||||.
T Consensus 177 ---~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~~i~~~SfSK~ 250 (412)
T PTZ00433 177 ---RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA--TFTSVADFD-TTVPRVILGGTAKN 250 (412)
T ss_pred ---CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC--Cccchhhcc-CCCceEEEccchhh
Confidence 567777899999999999999999999999999999999999999886421 112222222 22358999999999
Q ss_pred ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 257 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 257 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
||+||+|+||+++ ..++...+.+...+..... ...+++.+.|.++..+|.+. . .+++++.++.++++++.+.+
T Consensus 251 ~~~pGlRlG~~i~-~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-~----~~~~~~~~~~~~~~r~~l~~ 323 (412)
T PTZ00433 251 LVVPGWRLGWLLL-VDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNT-P----QEHLEQIVAKLEEGAMVLYN 323 (412)
T ss_pred cCCCCeeEEEEEE-eCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcC-c----HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999843 1121111223333333222 22357778888887777653 1 34567888999999999999
Q ss_pred HhhhccCCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHH
Q 015283 337 SLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYL 398 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~ 398 (410)
.|+ +... +.+..|++|+|+|+.+. .++++.+++++||.+.||. ||+++. .+++++++
T Consensus 324 ~L~-~~~~---~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~a 398 (412)
T PTZ00433 324 HIG-ECIG---LSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREA 398 (412)
T ss_pred HHh-cCCC---CcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHH
Confidence 998 6521 46678889999997542 3457788776799999973 999987 78899999
Q ss_pred HHHHHHHhhhc
Q 015283 399 ADAIIDSYHNV 409 (410)
Q Consensus 399 ~~~l~~~l~~~ 409 (410)
+++|.+++++.
T Consensus 399 l~~l~~~~~~~ 409 (412)
T PTZ00433 399 VERIKAFCERH 409 (412)
T ss_pred HHHHHHHHHHh
Confidence 99999988754
No 42
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=6.5e-45 Score=347.12 Aligned_cols=336 Identities=15% Similarity=0.172 Sum_probs=266.6
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-CceEEEecCCh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSG 111 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~gg 111 (410)
.+++|+|+.|.+ ..++ ++.+.+++.+...... ..|+|..|.+++|+++++++...+|..+++ ++|++ |+|+
T Consensus 28 ~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~i--t~g~ 99 (384)
T PRK12414 28 QHDALNLSQGAP----NFAP-DPALVEGVARAMRDGH-NQYAPMAGIAALREALAEKTERLYGARYDPASEVTV--IASA 99 (384)
T ss_pred hCCeEEcCCCCC----CCCC-CHHHHHHHHHHHHhCC-CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ECCh
Confidence 357899999997 3332 6888888877665443 779999999999999999987777776655 57998 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++..++ ...+.+||+|++++|+|..+...++..|.+++.+++. .+++.+|++.+++.+++ +++++++++|||
T Consensus 100 ~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~---~~~~v~i~~p~N 173 (384)
T PRK12414 100 SEGLYAAI--SALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLS-PEDFRVNWDEVAAAITP---RTRMIIVNTPHN 173 (384)
T ss_pred HHHHHHHH--HHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecC-ccccccCHHHHHhhcCc---ccEEEEEcCCCC
Confidence 99999873 3447799999999999999999999999999999874 34578999999988864 567777899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.++|.+++++|+++|++||+++|+||+|.++.+++.. ..++.......+++++++||||.||+||+|+||+++
T Consensus 174 PTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~--~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~-- 249 (384)
T PRK12414 174 PSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGAR--HHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLA-- 249 (384)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCC--ccCcccCcCccCcEEEEecccccccCccceEEEEec--
Confidence 9999999999999999999999999999999998864311 112222222245899999999999999999999855
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++.+.... .....+++.+.|.++..+|.++.. ..+.++.++++++.+.+.|+ +.| +.+.
T Consensus 250 -~~~l~~~l~~~~----~~~~~~~s~~~q~a~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~g----~~~~ 312 (384)
T PRK12414 250 -PAELMDEIRKVH----QFMVFSADTPMQHAFAEALAEPAS-------YLGLGAFYQRKRDLLARELA-GSR----FELL 312 (384)
T ss_pred -CHHHHHHHHHHH----hheecCCCcHHHHHHHHHhcCChH-------HHHHHHHHHHHHHHHHHHHH-hCC----Ceec
Confidence 777666654432 222335677888888888877532 13567788999999999998 776 4677
Q ss_pred cCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC------------eEEecCCCcccHHHHHHHHHH
Q 015283 352 LRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG------------RISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 352 ~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g------------Ris~~~~~~~~i~~~~~~l~~ 404 (410)
++.+++|+|+.+ +.+++.++++++||.+.||. ||+++. +++++++++++|++
T Consensus 313 ~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 313 PSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred CCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 888999999743 24567677777899999851 999997 88999999999875
No 43
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3e-44 Score=343.92 Aligned_cols=358 Identities=16% Similarity=0.132 Sum_probs=273.2
Q ss_pred CCCCCCCCcccchhHhhhc---CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 13 VTMAPPDPILGVSEAFKAD---TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
+...+++.+..+.+.+.+. .+.+.++|+.|+| ..+ +++.+.+++.+... . ...|++..|.+++|++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~-~~~~~~~a~~~~~~-~-~~~Y~~~~G~~~lr~aia~~ 76 (393)
T TIGR03538 4 LSRLQPYPFEKLAALLAGVTPPASKPPIALSIGEP----KHP-TPAFVLEALRENLH-G-LSTYPTTKGLPELRQAIARW 76 (393)
T ss_pred hhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCC----CCC-CCHHHHHHHHHHhh-c-cCCCCCCCCCHHHHHHHHHH
Confidence 3344555555555555433 3468899999998 332 26888888887664 2 47799999999999999999
Q ss_pred hcCCCCCc--ccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCE--EEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283 90 LFGADNSV--LKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAK--VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 164 (410)
Q Consensus 90 ~~~~~~~~--~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 164 (410)
+.+.++.. ++++ +|++ |+|+++++.++.. ..+.+||+ |++++|+|+.|...+...|.+++.+++.+++++.
T Consensus 77 ~~~~~~~~~~~~~~~~i~i--t~Ga~~al~~~~~--~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 152 (393)
T TIGR03538 77 LERRFDLPTGVDPERHVLP--VNGTREALFAFAQ--AVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFL 152 (393)
T ss_pred HHHhhCCcccCCCCceEEE--CCCcHHHHHHHHH--HHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCC
Confidence 97776665 6775 7988 9999999999843 33679986 9999999999999999999999999986556688
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh---
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--- 241 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--- 241 (410)
+|++++++.+.+ +++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++............
T Consensus 153 ~d~~~l~~~~~~---~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 229 (393)
T TIGR03538 153 PDFDAVPESVWR---RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLG 229 (393)
T ss_pred CCHHHHHHHHhh---cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhccccc
Confidence 999999988765 56677778999999999999999999999999999999999999987642101111111111
Q ss_pred -hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283 242 -TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 320 (410)
Q Consensus 242 -~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 320 (410)
...+++++++||||.|+++|+|+||++. ++++++++..... ....+++...|.++...+.+. +++
T Consensus 230 ~~~~~~vi~i~S~SK~~~~~GlRvG~~i~---~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~-------~~~ 295 (393)
T TIGR03538 230 RDDFRRCLVFHSLSKRSNLPGLRSGFVAG---DAEILKAFLRYRT----YHGCAMPIPTQLASIAAWNDE-------QHV 295 (393)
T ss_pred ccccccEEEEecchhhcCCcccceEEEec---CHHHHHHHHHHHH----hhccCcCHHHHHHHHHHhcCh-------HHH
Confidence 1346899999999999999999999744 7776666654322 122245667777766666543 345
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC--------------C
Q 015283 321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD--------------G 383 (410)
Q Consensus 321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~--------------g 383 (410)
++.++.++++++.+.+.|+ +. +.+..+.+|+|+|+.+. .++++++++++||.+.|| +
T Consensus 296 ~~~~~~~~~~~~~~~~~L~-~~-----~~~~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~ 369 (393)
T TIGR03538 296 RENRALYREKFAAVLEILG-QV-----LDLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEG 369 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-hh-----CcccCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCC
Confidence 7888899999999999997 54 24467889999999763 345667777789999654 1
Q ss_pred --eEEecCCCcccHHHHHHHHHHH
Q 015283 384 --RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 384 --Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
||+++. +++++++++++|++.
T Consensus 370 ~~Ris~~~-~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 370 RVRIALVA-PLEECVEAAERIRSF 392 (393)
T ss_pred EEEEEecC-CHHHHHHHHHHHHHh
Confidence 999987 889999999999875
No 44
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=3.6e-44 Score=342.78 Aligned_cols=363 Identities=15% Similarity=0.163 Sum_probs=278.6
Q ss_pred cCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHh
Q 015283 11 EGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 90 (410)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~ 90 (410)
.++.....+.+.++.... ...+++|+|+.|.+ ... .++.+.+++.+...... ..|.+..|.+++|+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~ 80 (391)
T PRK07309 9 KQLDKIEVSLIRQFDQSI--SDIPGILKLTLGEP----DFT-TPDHVKEAAKRAIDANQ-SHYTGMAGLLELRQAAADFV 80 (391)
T ss_pred hhhhhcCccHHHHHHHHH--HhcCCeEEcCCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHH
Confidence 445555554333332212 11257999999998 222 25778888877765433 56988999999999999999
Q ss_pred cCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283 91 FGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169 (410)
Q Consensus 91 ~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 169 (410)
...++..+++ ++|++ |+|+++++.++. ...+.+||+|++++|+|..+...++..|.+++.++.. ++++.+|++.
T Consensus 81 ~~~~~~~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~ 155 (391)
T PRK07309 81 KEKYNLDYAPENEILV--TIGATEALSASL--TAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEM 155 (391)
T ss_pred HHHhCCCCCCCCcEEE--eCChHHHHHHHH--HHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHH
Confidence 8777776664 68999 999999999984 3446799999999999999999999999999988873 4567899999
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+++.+++.+++++++++++|+||||.+++.+++++|+++|++||+++|+|++|.++.+.+. ...++... ..+++++
T Consensus 156 l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~--~~~~~i~ 231 (391)
T PRK07309 156 LEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PHVSIAEY--LPDQTIL 231 (391)
T ss_pred HHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CCCCHHHh--ccCCEEE
Confidence 9998875434567777789999999999999999999999999999999999999886421 12222222 2368999
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
++||||.||++|+|+||++. ++++++++..... ....+++...|.++..+|++... .....++.+++
T Consensus 232 ~~S~SK~~g~~GlRvG~~v~---~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~------~~~~~~~~~~~ 298 (391)
T PRK07309 232 INGLSKSHAMTGWRIGLIFA---PAEFTAQLIKSHQ----YLVTAATTMAQFAAVEALTNGKD------DALPMKKEYIK 298 (391)
T ss_pred EecChhhccCccceeEEEEe---CHHHHHHHHHHHh----hcccCCChHHHHHHHHHHhCChh------HHHHHHHHHHH
Confidence 99999999999999999855 7787776654322 12235667778888888876532 12456778888
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-------HHHHHHhhhcCcEEEcCCC----------eEEecCCCc
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-------KAQSDNMTNKWHVYMTKDG----------RISLAGLSL 392 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~ 392 (410)
+++.+.+.|+ +.+ +.+..+.+++|+|+.+. .+++.++++++||.+.||. ||+++. +.
T Consensus 299 ~~~~~~~~l~-~~~----~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~ 372 (391)
T PRK07309 299 RRDYIIEKMT-DLG----FKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SM 372 (391)
T ss_pred HHHHHHHHHH-HCC----CeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CH
Confidence 9999999998 776 46777889999997542 3456677777899998862 999987 78
Q ss_pred ccHHHHHHHHHHHhhhc
Q 015283 393 AKCEYLADAIIDSYHNV 409 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++|+++++++
T Consensus 373 ~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 373 ETIKEAMKRLKEYMEEH 389 (391)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 89999999999998765
No 45
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=2.3e-44 Score=343.71 Aligned_cols=360 Identities=16% Similarity=0.164 Sum_probs=280.0
Q ss_pred cCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHh
Q 015283 11 EGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 90 (410)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~ 90 (410)
+++...++..+.++...+. ..+..++|+.|.| ..+ .++.+.+++.+.+.... ..|++..|.+++|+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~p----~~~-~~~~~~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l 78 (387)
T PRK07683 7 PRVKDIQISGIRQFSNMVQ--NYDNLISLTIGQP----DFP-TPSHVKEAAKRAITENY-TSYTHNAGLLELRKAACNFV 78 (387)
T ss_pred HHHHhCCccHHHHHHHHHH--hcCCeEEecCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHH
Confidence 3444455544433332222 2357899999987 333 25788888888776543 67988899999999999999
Q ss_pred cCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283 91 FGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169 (410)
Q Consensus 91 ~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 169 (410)
...++..++++ +|++ |+|+++++.++.. ..+.+||.|++++|+|..|...++..|++++.++.. .+++.+|.+.
T Consensus 79 ~~~~g~~~~~~~~I~~--t~G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~ 153 (387)
T PRK07683 79 KDKYDLHYSPESEIIV--TIGASEAIDIAFR--TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRLTAEA 153 (387)
T ss_pred HHHhCCCCCCCCcEEE--eCChHHHHHHHHH--HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCCCHHH
Confidence 77777777888 8999 9999999998843 336799999999999999999999999999998873 4567788899
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+++.+++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|+++.+.+ +..++..+.+..+++++
T Consensus 154 l~~~~~~---~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~ 227 (387)
T PRK07683 154 LENAITE---KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ---PHTSIAHFPEMREKTIV 227 (387)
T ss_pred HHHhcCc---CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC---CcCChhhccCCcCCeEE
Confidence 9988865 56777789999999999999999999999999999999999999987642 12233232233458999
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
++||||.+|+||+|+||+++ ++++++++..... .....++..+|.++..+|.++. .++++.++++++
T Consensus 228 ~~s~SK~~~~pGlRiG~i~~---~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~ 294 (387)
T PRK07683 228 INGLSKSHSMTGWRIGFLFA---PSYLAKHILKVHQ----YNVTCASSISQYAALEALTAGK------DDAKMMRHQYKK 294 (387)
T ss_pred EeeccccccCccceeEEEEc---CHHHHHHHHHHHH----hccCCCChHHHHHHHHHHhCCh------HHHHHHHHHHHH
Confidence 99999999999999999855 7776666654321 1223456677888888887642 235677888999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcc
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLA 393 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~ 393 (410)
+++.+.+.|. +.+ +.+..+++++|+|+.+ + .+++.++++++||.+.||. ||+++. +++
T Consensus 295 ~~~~~~~~l~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~ 368 (387)
T PRK07683 295 RRDYVYNRLI-SMG----LDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIE 368 (387)
T ss_pred HHHHHHHHHH-HcC----CcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHH
Confidence 9999999998 776 4677888999998743 2 3456677787899999862 999987 899
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
++.+++++|.+++.+
T Consensus 369 ~~~~al~~l~~~l~~ 383 (387)
T PRK07683 369 TLKEGLDRLEAFLQQ 383 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998765
No 46
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-44 Score=344.33 Aligned_cols=369 Identities=19% Similarity=0.212 Sum_probs=290.2
Q ss_pred cccccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK 84 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 84 (410)
|++++++...+++.+..+....++ ...+++++|+.|.| ..+ .++.+.+++.+.+.... ..|++..|.+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~-~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~ 75 (393)
T PRK05764 2 MKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEP----DFD-TPEHIKEAAIEALDDGK-TKYTPAAGIPELRE 75 (393)
T ss_pred cchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCC----CCC-CCHHHHHHHHHHHhcCC-CCcCCCCChHHHHH
Confidence 567788888888887554443332 12357899999998 333 36888888887775443 56988899999999
Q ss_pred HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283 85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 164 (410)
Q Consensus 85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 164 (410)
++++++.+.++..+++++|++ ++|+++++..+. ...+.+||.|++++|+|..+...++.+|.+++.+++.++.++.
T Consensus 76 ~ia~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~~--~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (393)
T PRK05764 76 AIAAKLKRDNGLDYDPSQVIV--TTGAKQALYNAF--MALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK 151 (393)
T ss_pred HHHHHHHHHhCCCCCHHHEEE--eCCcHHHHHHHH--HHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence 999998777776777899999 999999999873 3347799999999999999999999999999999985455678
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH-hhc
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATR 243 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~ 243 (410)
+|++.+++.+.. ++.++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++. ...++... .+.
T Consensus 152 ~d~~~l~~~l~~---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~ 226 (393)
T PRK05764 152 LTVEQLEAAITP---KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPEL 226 (393)
T ss_pred CCHHHHHHhhCc---cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCCC
Confidence 999999998864 566777899999999999999999999999999999999999998876421 11222222 233
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
.+++++++||||.++++|+|+||++. ++++++++.... .....+++.++|.++...|.+. .+++++.
T Consensus 227 ~~~~i~~~s~SK~~~~~G~RiG~i~~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~ 293 (393)
T PRK05764 227 RDRTITVNGFSKAYAMTGWRLGYAAG---PKELIKAMSKLQ----SHSTSNPTSIAQYAAVAALNGP------QDEVEEM 293 (393)
T ss_pred cCCEEEEecCcccccCccceeEEEec---CHHHHHHHHHHH----hhcccCCChHHHHHHHHHHcCC------hHHHHHH
Confidence 46899999999999999999999754 788666655432 2234467778888887777631 2345677
Q ss_pred HHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------e
Q 015283 324 AGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------R 384 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------R 384 (410)
++.++++++.+.+.|+ +. + +.+..+++++|+|+.+. .++...+++++||.+.||. |
T Consensus 294 ~~~~~~~~~~l~~~L~-~~~g----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vR 368 (393)
T PRK05764 294 RQAFEERRDLMVDGLN-EIPG----LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVR 368 (393)
T ss_pred HHHHHHHHHHHHHHHh-hCCC----CcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEE
Confidence 8888999999999998 77 4 46677888899887542 3456777777899999862 9
Q ss_pred EEecCCCcccHHHHHHHHHHHhhhc
Q 015283 385 ISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 385 is~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|+++. +++++++++++|+++++++
T Consensus 369 is~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 369 LSYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred EEecC-CHHHHHHHHHHHHHHHHhh
Confidence 99987 8999999999999998764
No 47
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.2e-44 Score=341.71 Aligned_cols=334 Identities=15% Similarity=0.123 Sum_probs=265.3
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
..++++|+.|++ ..+ .++.+ +++.+++.... ..|++..|.++||+++++++.+ +++++|++ |+|++
T Consensus 25 ~~~~~~~~~~e~----~~~-~~~~~-~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G~~ 90 (373)
T PRK07324 25 ESCIDSLTLEEL----LAL-AGKNP-EAFYQELGQKK-LTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNGAT 90 (373)
T ss_pred cCCCCCCcHHHH----Hhc-cCcch-HHHHHHHhcCC-ccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCChH
Confidence 357999999998 222 24455 66666665544 6899999999999999999753 34789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++.+++ ...+.+||+|+++.|+|..+...++..|++++.+++.+++++.+|++.+++.+.+ +++++++++||||
T Consensus 91 ~al~~~~--~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~~kli~i~~p~NP 165 (373)
T PRK07324 91 GANFLVL--YALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP---NTKLICINNANNP 165 (373)
T ss_pred HHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC---CCcEEEEeCCCCC
Confidence 9999984 3447799999999999999999999999999999986556788999999888764 6678888999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++|++||++||+||+|.++.+++ ...+ .....+++|+++||||.+|++|+|+||++.
T Consensus 166 tG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s---~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~--- 236 (373)
T PRK07324 166 TGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPS---IADLYEKGISTNSMSKTYSLPGIRVGWIAA--- 236 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCC---hhhccCCEEEEecchhhcCCccceeEEEec---
Confidence 9999999999999999999999999999999988642 1112 223346789999999999999999999844
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++++... ......+++.+.+.++...|++. .+++++.++.++++++.+.+.|+ +.+. +....
T Consensus 237 ~~~li~~~~~~----~~~~~~~~~~~~q~~a~~~l~~~------~~~l~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~ 302 (373)
T PRK07324 237 NEEVIDILRKY----RDYTMICAGVFDDMLASLALEHR------DAILERNRKIVRTNLAILDEWVA-KEPR---VSYVK 302 (373)
T ss_pred CHHHHHHHHHH----hCcEEecCChHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHh-cCCC---ceEEC
Confidence 77866665543 33233456677788887777642 34567888899999999999998 6632 45677
Q ss_pred CCcceeeecCC-----CHHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 353 RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 353 ~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|.+|+|.|+.+ +.+++.++++++||.+.||. |||++. +++.+.+++++|++++++.
T Consensus 303 p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 303 PKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 88777766533 24567888887899999983 999987 8899999999999998764
No 48
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-44 Score=341.43 Aligned_cols=340 Identities=17% Similarity=0.160 Sum_probs=264.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt 112 (410)
+.+++|+.|.| ..+. ++.+.+++.+.+.... ..|++..|.+++|+++++++.+.++..++++ +|++ |+|++
T Consensus 26 ~~~i~l~~g~p----~~~~-p~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 97 (387)
T PRK08912 26 HGAINLGQGFP----DDPG-PEDVRRAAADALLDGS-NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMV--TSGAT 97 (387)
T ss_pred CCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEE--eCCcH
Confidence 57899999998 2222 4667777666554443 6799999999999999999887778778888 8999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++..++ ...+.+||+|++++|+|+.+...++..|++++.+++. .+++.+|++.+++.+.. +++++++++||||
T Consensus 98 ~al~~~~--~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP 171 (387)
T PRK08912 98 EALAAAL--LALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE-PPHWRLPRAALAAAFSP---RTKAVLLNNPLNP 171 (387)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccCcCCHHHHHHHhCc---cceEEEEeCCCCC
Confidence 9998873 3446799999999999999999999999999999873 34678999999998864 5667777899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.++|.+++++|+++|++|+++||+||+|.++.+++. ...++....+..+++++++||||.||++|+|+||+++
T Consensus 172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~--- 246 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR--RHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCA--- 246 (387)
T ss_pred cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC--CCcChhhCCCccCceEEEeechhhccCcCceeEEEec---
Confidence 99999999999999999999999999999998886531 1112222222235899999999999999999999855
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++.+..... ....+.+...|.++...+... .+++++.+++++++++.+.+.|+ ..| +.+.+
T Consensus 247 ~~~~~~~l~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~ 311 (387)
T PRK08912 247 APPLLRVLAKAHQ----FLTFTTPPNLQAAVAYGLGKP------DDYFEGMRADLARSRDRLAAGLR-RIG----FPVLP 311 (387)
T ss_pred CHHHHHHHHHHHh----hccccCChHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHH-hCC----CcccC
Confidence 7776666544322 111234444566665555432 23346788899999999999998 776 46677
Q ss_pred CCcceeeecCCC-------H-HHHHHhhhcCcEEEcCC----------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 353 RQIGMFSFTGLN-------K-AQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 353 ~~~~~~~~~~~~-------~-~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+++++|+|+.+. . +++.++++++||.+.|+ + ||+++. +++.+++++++|+++++.
T Consensus 312 ~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 312 SQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR 386 (387)
T ss_pred CCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 888999997542 2 35677777789999885 1 999997 789999999999998764
No 49
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=4.6e-44 Score=344.12 Aligned_cols=338 Identities=17% Similarity=0.155 Sum_probs=257.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
+++++|+.|++ ..+ +++.+.+++.+.+.. .....|.+..|.++||+++++++.+.++..+++++|++ |+
T Consensus 34 ~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~ 106 (409)
T PRK07590 34 AKIIRLGIGDV----TQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFI--SD 106 (409)
T ss_pred CceEEecCcCC----CCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEE--CC
Confidence 56899999997 333 257778877776643 12367989999999999999998777788889999999 99
Q ss_pred ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC-----------ccceeeecCCCcccChhhHHHHHhcCC
Q 015283 110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP-----------WSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
|+++++.++ ...+.+||+|++++|+|+.|...++..|.+ ++.+++.+++++.+|++.
T Consensus 107 Ga~~al~~l---~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~--------- 174 (409)
T PRK07590 107 GAKCDTGNI---LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE--------- 174 (409)
T ss_pred CHHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc---------
Confidence 999999875 344679999999999999999999999987 888887434445455331
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
++++++++++||||||.++|.+++++|+++|++||++||+||+|.+|.+.+. ...++..+....+++|+++||||.||
T Consensus 175 ~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~~ 252 (409)
T PRK07590 175 EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS--LPHSIYEIEGARECAIEFRSFSKTAG 252 (409)
T ss_pred cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC--CCcchhhCCCcccceEEEecCccccC
Confidence 2566777789999999999999999999999999999999999999876421 11122222122347999999999999
Q ss_pred ccCCCcceEEEEeCCchhHHHH--------HHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARV--------KSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
+||+|+||+++ ++++++++ ...........+.+++.+.|.++..++.+.. .+++++.++.++++
T Consensus 253 ~pGlRiG~~i~---~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~ 324 (409)
T PRK07590 253 FTGTRCAYTVV---PKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG-----KAQIKELIDYYMEN 324 (409)
T ss_pred CcCceeEEEEc---CHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHH
Confidence 99999999854 77766522 1111111122233567788888877776532 24567888999999
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKC 395 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i 395 (410)
++++.+.|+ +.+ +.+..+.+++|+|+.+ + .+++..+++++||.+.||. ||+++. +++++
T Consensus 325 r~~l~~~L~-~~~----~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l 398 (409)
T PRK07590 325 AKIIREGLE-SAG----FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SRENV 398 (409)
T ss_pred HHHHHHHHH-hcC----CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHHH
Confidence 999999998 776 4666778899999865 2 3456778877899999872 999755 88999
Q ss_pred HHHHHHHHHHh
Q 015283 396 EYLADAIIDSY 406 (410)
Q Consensus 396 ~~~~~~l~~~l 406 (410)
++++++|++++
T Consensus 399 ~~~l~rl~~~~ 409 (409)
T PRK07590 399 LEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHhhC
Confidence 99999998764
No 50
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-44 Score=342.38 Aligned_cols=342 Identities=16% Similarity=0.147 Sum_probs=273.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+++|+|+.|.+ ..++ ++.+.+++.+...... ..|.+..|.+++|+++++++.+.+|..+++++|++ |+|+++
T Consensus 33 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~ 104 (391)
T PRK08361 33 ENVISLGIGEP----DFDT-PKNIKEAAKRALDEGW-THYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIV--TAGAYE 104 (391)
T ss_pred cCeEEcCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEE--eCChHH
Confidence 46899999987 3333 6788888887765543 66988899999999999998776677788899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.+++ ...+.+||+|++++|+|..+...++..|.+++.+++.++.++.+|++.+++.+++ ++.++++++|+|||
T Consensus 105 al~~~~--~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~v~i~~p~NPt 179 (391)
T PRK08361 105 ATYLAF--ESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK---RTRMIVINYPNNPT 179 (391)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc---ccEEEEEeCCCCCC
Confidence 999874 3346799999999999999999999999999999986555678999999998875 56677778999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.++|.+++++|+++|+++++++|+||+|.++.+.+. ...++... ..+++++++|+||.||++|+|+||+++ +
T Consensus 180 G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~---~ 252 (391)
T PRK08361 180 GATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIA---P 252 (391)
T ss_pred CcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhcc---C
Confidence 9999999999999999999999999999999875421 11122111 235899999999999999999999854 6
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++++... ......+.+.+.|.++..+|.+... .+++++.++.++++++.+.+.|+ +++ + +.+..+
T Consensus 253 ~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~L~-~~~--~-~~~~~p 320 (391)
T PRK08361 253 EQVIKDMIKL----HAYIIGNVASFVQIAGIEALRSKES----WKAVEEMRKEYNERRKLVLKRLK-EMP--H-IKVFEP 320 (391)
T ss_pred HHHHHHHHHH----HhhhccCCChHHHHHHHHHhcCCcc----cHHHHHHHHHHHHHHHHHHHHHH-hCC--C-CeecCC
Confidence 7766655432 2222335677788888888887543 24567889999999999999998 763 1 567788
Q ss_pred CcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 354 QIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 354 ~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
++++|+|+.+ + .+++..+++++||.+.||. ||+++. +++++++++++|++++++
T Consensus 321 ~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 321 KGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred CEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 8999999744 3 3456677776899998862 999986 788999999999998865
No 51
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=8.6e-44 Score=338.03 Aligned_cols=347 Identities=14% Similarity=0.100 Sum_probs=259.6
Q ss_pred CCCcccchhHhhhcCC---CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283 18 PDPILGVSEAFKADTD---EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD 94 (410)
Q Consensus 18 ~~~~~~~~~~~~~~~~---~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~ 94 (410)
+.++.++...+.+... .++++|+.|.| ..++ ++.+.+++.+.... ...|++..|.+++|+++++++.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~ 77 (374)
T PRK05839 5 PYPFEKLRELLKEITPNKEYKGLDLTIGEP----QFET-PKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRF 77 (374)
T ss_pred cchHHHHHHHHHHhhhcCCCCeEEcCCCCC----CCCC-CHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 3444444444443333 38999999997 3332 57788887765432 4779889999999999999998877
Q ss_pred CCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHH
Q 015283 95 NSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
|..+++++|++ |+|+++++..+..++ .+ .+||.|++++|+|+.|...+...|++++.+++..++++.+|++..+
T Consensus 78 g~~~~~~~I~i--t~G~~~al~~~~~~~-~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~-- 152 (374)
T PRK05839 78 KIELKENELIP--TFGTREVLFNFPQFV-LFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE-- 152 (374)
T ss_pred CCCCCcceEEE--ecCcHHHHHHHHHHH-hcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--
Confidence 87888999999 999999998863222 12 3789999999999999999999999999999854556777765432
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-----hcCCcEE
Q 015283 174 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-----TRGMELL 248 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-----~~~~~~i 248 (410)
+. ++++++++|||||||.++|.+++++|+++|+++|++||+||+|.++.+++ ...++.... ...++++
T Consensus 153 ~~----~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi 225 (374)
T PRK05839 153 LQ----EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVL 225 (374)
T ss_pred hc----cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEE
Confidence 22 45666778999999999999999999999999999999999999986432 111221211 1336899
Q ss_pred EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
+++||||.|++||+|+||++. ++++++++.... .....+.+...|.++...+.+.+ ++++.++.++
T Consensus 226 ~~~SfSK~~~~~GlRiG~ii~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~ 291 (374)
T PRK05839 226 VINSISKRSSAPGLRSGFIAG---DASILKKYKAYR----TYLGCASPLPLQKAAAVAWLDDE-------HAEFFRNIYA 291 (374)
T ss_pred EEeccccccCCccceeEEEec---CHHHHHHHHHHH----hhcCCCCChHHHHHHHHHhccch-------HHHHHHHHHH
Confidence 999999999999999999854 777666654432 22223456667777766665432 3456778888
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCC----------C--eEEecCCCccc
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKD----------G--RISLAGLSLAK 394 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~~ 394 (410)
++++++.+.|. +. .|.+|+|+|+.+ +.+++.++++++||.+.|| + |||++. ++++
T Consensus 292 ~~~~~~~~~l~--------~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~ 360 (374)
T PRK05839 292 KNLKLAREILG--------IT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPK 360 (374)
T ss_pred HHHHHHHHhcC--------CC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHH
Confidence 88887776543 22 577899999977 3556777777689999985 1 999987 8999
Q ss_pred HHHHHHHHHHHhhh
Q 015283 395 CEYLADAIIDSYHN 408 (410)
Q Consensus 395 i~~~~~~l~~~l~~ 408 (410)
+.+++++|++++++
T Consensus 361 ~~~~l~~l~~~l~~ 374 (374)
T PRK05839 361 LEKALEIIKTYLEN 374 (374)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998753
No 52
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2e-43 Score=338.84 Aligned_cols=348 Identities=18% Similarity=0.164 Sum_probs=272.2
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
+.++|+|+.|.|. ....+ +++.+.+++.+.+.... ..|++..|.+++|+++++++...++..+++++|++ |+|++
T Consensus 29 ~~~~i~l~~g~p~-~~~~~-p~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G~~ 103 (398)
T PRK08363 29 GIKVIRLNIGDPV-KFDFQ-PPEHMKEAYCRAIKEGH-NYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TAAVT 103 (398)
T ss_pred CCCeEEEeCCCCC-cCCCC-CCHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eCCHH
Confidence 3579999999981 11222 26888888887775443 57988899999999999998887788888999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++.++. ...+.+||+|++++|+|..+...++..|.+++.++..+++++.+|++.+++.+.+ ++.++++++||||
T Consensus 104 ~al~~~~--~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NP 178 (398)
T PRK08363 104 EALQLIF--GALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE---KTKAIAVINPNNP 178 (398)
T ss_pred HHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc---ceEEEEEECCCCC
Confidence 9999984 3347799999999999999999999999888877433456677899999988864 5677777899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe-
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC- 271 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~- 271 (410)
||.+++.+++++|+++|+++|+++|+||+|.++.+.+ ...++..+ ....++++++||||.|++||+|+||+ ++
T Consensus 179 tG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~--~~~ 252 (398)
T PRK08363 179 TGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSL-TKDVPVIVMNGLSKVYFATGWRLGYI--YFV 252 (398)
T ss_pred CCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHc-CcCCcEEEEecchhccCCccceEEEE--EEe
Confidence 9999999999999999999999999999999887642 11222222 23347999999999999999999998 43
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
+++++++.+...+....... .+++..+|.++..+|.+. .+++++.+++++++++++.+.|+ +++ + +.+.
T Consensus 253 ~~~~~~~~l~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~------~~~l~~~~~~~~~~~~~l~~~L~-~~~--~-~~~~ 321 (398)
T PRK08363 253 DPEGKLAEVREAIDKLARIR-LCPNTPAQFAAIAGLTGP------MDYLEEYMKKLKERRDYIYKRLN-EIP--G-ISTT 321 (398)
T ss_pred CcHHHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHh-cCC--C-CEec
Confidence 45666676666554332222 246777788887777642 24456788899999999999998 763 1 5667
Q ss_pred cCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 352 LRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 352 ~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.+.+++|.|+.+ +.+++.++++++||.+.||. |||++. +++++++++++|++++.+
T Consensus 322 ~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 322 KPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 788999998633 24556777777899998862 999975 889999999999998765
No 53
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=6.6e-44 Score=340.60 Aligned_cols=336 Identities=14% Similarity=0.155 Sum_probs=266.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt 112 (410)
.++|+|+.|.+ ..+. ++.+.+++.+...... ..|.+..|.+++|+++++++.+.++..++++ +|++ |+|++
T Consensus 30 ~~~i~l~~g~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~--t~G~~ 101 (386)
T PRK09082 30 HGAINLSQGFP----DFDG-PPYLVEALAYAMAAGH-NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITV--TAGAT 101 (386)
T ss_pred CCEEEecCCCC----CCCC-CHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCHH
Confidence 46899999987 3322 5778888877765443 6798899999999999999877667766665 7988 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++..+. ...+.+||+|++++|+|+.+...++..|.+++.+++. .+++.+|++.+++.+++ +++++++++|+||
T Consensus 102 ~al~~~~--~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NP 175 (386)
T PRK09082 102 EALFAAI--LALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQ-PPDFRVDWQRFAAAISP---RTRLIILNTPHNP 175 (386)
T ss_pred HHHHHHH--HHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccccCCHHHHHHhcCc---cceEEEEeCCCCC
Confidence 9999884 3446799999999999999999999999999999984 34688999999998865 5667777899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+....+++++++||||.+|++|+|+||+++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~--- 250 (386)
T PRK09082 176 SGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA--GHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA--- 250 (386)
T ss_pred CCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC--CCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC---
Confidence 99999999999999999999999999999998886421 1122222222346899999999999999999999754
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++.+..... ....+++...|.++..++.+. .+++++.++.++++++++.+.|+ +.+ +.+.+
T Consensus 251 ~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~~ 315 (386)
T PRK09082 251 PAALSAEFRKVHQ----YNTFTVNTPAQLALADYLRAE------PEHYLELPAFYQAKRDRFRAALA-NSR----FKLLP 315 (386)
T ss_pred CHHHHHHHHHHHh----hhcCCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hCC----CcccC
Confidence 7786666555332 222356777888887777632 23456788899999999999998 766 46777
Q ss_pred CCcceeeecCC------CH-HHHHHhhhcCcEEEcCCC------------eEEecCCCcccHHHHHHHHHH
Q 015283 353 RQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG------------RISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 353 ~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~g------------Ris~~~~~~~~i~~~~~~l~~ 404 (410)
+.+++|+|+.+ +. +++.++++++||.+.||. ||+++. +++++++++++|++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 316 CEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred CCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 88999999753 23 456677778899998861 999987 88999999999875
No 54
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-42 Score=331.83 Aligned_cols=361 Identities=21% Similarity=0.266 Sum_probs=268.7
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCC-c-ccCCceEEEecCChh
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS-V-LKEQRVATVQGLSGT 112 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~-~-~~~~~i~~~~t~ggt 112 (410)
..+|.+.|.+.+..+ +.+.+.+.+++.+.... ....|++..|.++||+++++++.+..+. . .+.++|++ |+|++
T Consensus 4 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~i--t~G~~ 79 (388)
T PRK08637 4 TKYNATIGMATEKGG-PMYLSSLQDLLNDLTPD-EIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIV--TNALT 79 (388)
T ss_pred cceecceeeEecCCC-cchHHHHHHHHHhhccc-cccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeE--ccchH
Confidence 457889999854444 45567777776654333 3488999999999999999998665422 1 12257888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhHHHHHhc-CCCCcEEEEeCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILLHGCAH 190 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~~~~ii~~~p~ 190 (410)
+++.++..+ .+.+||.|++++|+|+.|...+. ..|++++.+++.+ +++++|++.+++.++. .++.+.++++++||
T Consensus 80 ~al~~~~~~--l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~ 156 (388)
T PRK08637 80 HGLSLVADL--FVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPN 156 (388)
T ss_pred HHHHHHHHH--hcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCC
Confidence 999987433 36799999999999999998765 5899999999832 3457899999988871 12356777889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHH-----cCCcccccccCCCCCCCCCCCchhH-hHHHhhcCCcE--EEEecccccccccCC
Q 015283 191 NPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDNDASS-VRLFATRGMEL--LVAQSYSKNLGLYAE 262 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~-----~~~~li~Deay~~~~~~~~~~~~~~-~~~~~~~~~~~--i~~~S~sK~~~~~G~ 262 (410)
||||.+++.+++++|+++|++ |+++||+||+|.++.+.+. ...+ ...+.+..+++ ++++|+||.+++||+
T Consensus 157 NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~--~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGl 234 (388)
T PRK08637 157 NPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS--YKESLFAALANLHSNILAVKLDGATKEEFVWGF 234 (388)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc--cchhhHHHhhcccccceEEEeccccccCCCccc
Confidence 999999999999999999875 8999999999999986531 1112 12223333464 456799999999999
Q ss_pred CcceEEEEe---CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 263 RIGAMNVVC---SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 263 r~G~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
|+||+++.. .++++.+++.............+++.++|.++..+|.++.+ .+++++.+..++++++.+.+.|+
T Consensus 235 RlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~l~ 310 (388)
T PRK08637 235 RVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF----DKEKQEKFQILKERYEKTKEVLY 310 (388)
T ss_pred ceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 999985321 24676666655432222223346788899999999987654 55667778889989888888887
Q ss_pred hccCCCCCcccccCCcceeeecCCC----HHHHHHhhhcCcEEEcCCC----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 340 AKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 340 ~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..+....+.+.++++|+|+|+.+. .++++++++++||.+.+.+ ||+++..+++++++++++|+++++.+
T Consensus 311 -~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 311 -DGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred -hhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 553222256778889999998763 3456677676799887543 99998878999999999999998764
No 55
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=5.1e-43 Score=336.19 Aligned_cols=366 Identities=16% Similarity=0.139 Sum_probs=279.6
Q ss_pred CcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc
Q 015283 20 PILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 97 (410)
Q Consensus 20 ~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~ 97 (410)
++.++...+++. ++.++++|+.|.| +.....++++.+.+++.+.+.......|.+..|.+++|+++++++....+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 93 (403)
T TIGR01265 15 PIRAIVDNLKVKPNPEKPIIPLSHGDP-SVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGK 93 (403)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeCCCCC-CccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 445555555554 2358999999997 1111223368888888887755433579889999999999999988766777
Q ss_pred ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283 98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
+++++|++ |+|+|+++.++... .+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++.+++.+.+
T Consensus 94 ~~~~~ii~--t~G~t~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~- 168 (403)
T TIGR01265 94 LTADDVVL--TSGCSQAIEICIEA--LANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE- 168 (403)
T ss_pred CCHHHEEE--ecChHHHHHHHHHH--hCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc-
Confidence 77899999 99999999998433 35799999999999999999999999999988875455678999999988864
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++.++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+.+ ....++..+ ....++|+++||||.|
T Consensus 169 --~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~~~~vi~~~S~SK~~ 243 (403)
T TIGR01265 169 --KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASF-ASIVPVLSLGGISKRW 243 (403)
T ss_pred --CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhh-ccCCcEEEEeeccccc
Confidence 56677779999999999999999999999999999999999999998653 122233232 2234799999999999
Q ss_pred cccCCCcceEEEEeCCc-hhH-HHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSS-DLA-ARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
++||+|+||++ +.++ ++. +++.+.+..... ...+++.+.|.++..+|.+.. ..++++.+++++++++.+.
T Consensus 244 ~~pGlRiG~~v--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~ 315 (403)
T TIGR01265 244 VVPGWRLGWII--IHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTP-----QEFFDGKISVLKSNAELCY 315 (403)
T ss_pred CCCcceEEEEE--EeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhCh-----HHHHHHHHHHHHHHHHHHH
Confidence 99999999984 3322 322 224443333322 123567788888888876521 3456788899999999999
Q ss_pred HHhhhccCCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHH
Q 015283 336 DSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEY 397 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~ 397 (410)
+.|+ ..+. +.+..|.+|+|+|+.+. .+++.++++++||.+.||. ||+++. +++++++
T Consensus 316 ~~L~-~~~~---~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~ 390 (403)
T TIGR01265 316 EELK-DIPG---LVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PESMLEE 390 (403)
T ss_pred HHHh-cCCC---ceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHHHHHH
Confidence 9998 7631 45566889999998652 2456777777899999973 999987 7889999
Q ss_pred HHHHHHHHhhhc
Q 015283 398 LADAIIDSYHNV 409 (410)
Q Consensus 398 ~~~~l~~~l~~~ 409 (410)
++++|++++.++
T Consensus 391 ~l~~l~~~~~~~ 402 (403)
T TIGR01265 391 ACSRIKEFCERH 402 (403)
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 56
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-42 Score=308.86 Aligned_cols=346 Identities=16% Similarity=0.151 Sum_probs=287.4
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
+++++.|++.+. .++ .+|.+++|+.+.++.+. .+|+ .+.+++.+++++|+.++++..+.++.|.+ +.|.-
T Consensus 24 ~~DvlPmWVADM----Df~-~pp~i~~Al~~rvdhGv-fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~VV 93 (388)
T COG1168 24 NEDVLPMWVADM----DFP-TPPEIIEALRERVDHGV-FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPGVV 93 (388)
T ss_pred CCCcceeeeecc----cCC-CCHHHHHHHHHHHhcCC-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCcch
Confidence 368999999987 444 37999999999988775 7784 67889999999999999999999999999 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
-++..+.+.+ ..+||.|++..|.|+++....+..|.+++..|+..+ ..+.+|++.|++.+.+ ++.+++++|||||
T Consensus 94 pgi~~~I~~~--T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~iLCnPHN 169 (388)
T COG1168 94 PGISLAIRAL--TKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLFILCNPHN 169 (388)
T ss_pred HhHHHHHHHh--CcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEEEEeCCCC
Confidence 9999874333 669999999999999999999999999999999743 3568899999999987 4568888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCcceEEEE
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
|||.+++.+||.+|.++|.+||+.||+||+|+++.+.+. .+.++..+. ...++.+++.|.||+|+++|++++++ +
T Consensus 170 P~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~--~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~--I 245 (388)
T COG1168 170 PTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH--KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI--I 245 (388)
T ss_pred CCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC--CccchhhcChhhhcceEEEeeccccccchhhhheeE--E
Confidence 999999999999999999999999999999999998642 233332222 23468999999999999999999998 6
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
..++++.+++.+.+... ...+++.++..|...++++++- | +.+..+.++.+++++.+.+.+.++. +++
T Consensus 246 i~n~~lr~~~~~~l~~~---~~~~~n~lg~~A~~aAY~~G~~---W---Ld~L~~yl~~N~~~~~~~l~~~~P~---v~v 313 (388)
T COG1168 246 ISNRELRAKFLKRLKRN---GLHGPSALGIIATEAAYNQGEP---W---LDELLEYLKDNRDYVADFLNKHLPG---VKV 313 (388)
T ss_pred ecCHHHHHHHHHHHHHh---cCCCCchHHHHHHHHHHHhchH---H---HHHHHHHHHHHHHHHHHHHHhhCCC---cEE
Confidence 67888777777766533 3457888888887777777632 3 4677888899999999999833432 688
Q ss_pred ccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCC------C----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 351 ILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 351 ~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~------g----Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..|+++|.+|+++ + .+..+.++++.+|.+.+| | |+++++ +.+.+++++++|+.++++.
T Consensus 314 ~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 314 TEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKKR 387 (388)
T ss_pred ecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhcc
Confidence 9999999999965 4 456778888899999987 1 999998 9999999999999998764
No 57
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=4e-43 Score=335.69 Aligned_cols=358 Identities=14% Similarity=0.117 Sum_probs=271.8
Q ss_pred CCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcC
Q 015283 13 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 92 (410)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~ 92 (410)
+...++..+.++.+... .++++||+.|.| ..+. ++.+.+++.+.+.... ..|++..|.+++|+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~ 76 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV---RTGAVNLGQGFP----DEDG-PPEMLEAAQEAIAGGV-NQYPPGPGIPELRAAIAAQRRR 76 (387)
T ss_pred hhhcCccHHHHHHHHHh---hCCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHH
Confidence 44445444444443332 347899999998 2222 3556676666654443 6798889999999999999877
Q ss_pred CCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcccChhhH
Q 015283 93 ADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGM 170 (410)
Q Consensus 93 ~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l 170 (410)
.++..++++ +|++ |+|+++++.++ +...+.+||+|+++.|+|+.+...++..|.+++.+++.+. .++.+|++++
T Consensus 77 ~~g~~~~~~~~i~~--t~G~~~al~~~--~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 152 (387)
T PRK07777 77 RYGLEYDPDTEVLV--TVGATEAIAAA--VLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDAL 152 (387)
T ss_pred HhCCCCCCCCcEEE--eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHH
Confidence 777777776 7998 99999999887 3444679999999999999999999999999999988544 3678999999
Q ss_pred HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
++.+.+ ++.++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+.+. ...++..+.+..++++++
T Consensus 153 ~~~~~~---~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~ 227 (387)
T PRK07777 153 RAAVTP---RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTVTI 227 (387)
T ss_pred HHhcCc---ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEEEE
Confidence 998864 566777889999999999999999999999999999999999999886422 122232222234589999
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
+||||.||++|+|+||+++ ++++++++.... ......++...|.++..++.+. .+++++.++.++++
T Consensus 228 ~S~SK~~g~~GlRiG~~~~---~~~l~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~ 294 (387)
T PRK07777 228 SSAAKTFNVTGWKIGWACG---PAPLIAAVRAAK----QYLTYVGGAPFQPAVAHALDHE------DAWVAALRDSLQAK 294 (387)
T ss_pred eechhhccCcCceeEEEec---CHHHHHHHHHHH----hhcccCCCCHHHHHHHHHHhCC------cHHHHHHHHHHHHH
Confidence 9999999999999999754 777666554432 2112234555666776666643 23356788899999
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecCC------C-HHHHHHhhhcCcEEEcCCC-------------eEEecCC
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG-------------RISLAGL 390 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ll~~~gi~v~~~g-------------Ris~~~~ 390 (410)
++.+.+.|+ +.+ +++.++++++|+|+.+ + .++++++++++||.+.||. ||+++.
T Consensus 295 ~~~l~~~L~-~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~- 368 (387)
T PRK07777 295 RDRLAAGLA-EAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK- 368 (387)
T ss_pred HHHHHHHHH-hCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-
Confidence 999999998 776 4677788899999653 2 4557777777899998861 999987
Q ss_pred CcccHHHHHHHHHHHhh
Q 015283 391 SLAKCEYLADAIIDSYH 407 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~ 407 (410)
+++++++++++|+++..
T Consensus 369 ~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 369 RDDTLDEAIRRLRALRG 385 (387)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 89999999999988753
No 58
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-43 Score=335.49 Aligned_cols=363 Identities=17% Similarity=0.146 Sum_probs=277.9
Q ss_pred cCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283 11 EGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
+++....+..+..+.+.+.+. ++.+.++|+.|.+ ..+ .++.+.+++.+.........|.+..|.+++|+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~ 78 (386)
T PRK07550 4 PLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVP----GYP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAA 78 (386)
T ss_pred hhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCC----CCC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHH
Confidence 345555566666666555533 3457899999997 232 267788887776543334679888999999999999
Q ss_pred HhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283 89 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 168 (410)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 168 (410)
++...++..+++++|++ |+|+++++.+++.. .+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++
T Consensus 79 ~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~ 154 (386)
T PRK07550 79 HYSRLYGAAISPEQVHI--TSGCNQAFWAAMVT--LAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPA 154 (386)
T ss_pred HHHHHhCCCCCcceEEE--ecCcHHHHHHHHHH--hcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHH
Confidence 99877788888999999 99999999887433 367999999999999999999999999999999854566778999
Q ss_pred hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283 169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248 (410)
Q Consensus 169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (410)
.+++.+++ +++++++++|+||||.++|.+++++|+++|++||++||+||+|.++.+.. . ...+.....+...+++
T Consensus 155 ~l~~~~~~---~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~-~-~~~~~~~~~~~~~~~i 229 (386)
T PRK07550 155 AAEALITP---RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGG-G-APHDLFADPDWDDTLV 229 (386)
T ss_pred HHHHHhcc---cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCC-C-CCcchhhCCCccccEE
Confidence 99998875 55566667899999999999999999999999999999999999886531 1 1111111112245899
Q ss_pred EEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 249 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 249 ~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
+++||||.+|++|+|+||++. +++.++++..... ....+++.++|.++..++.+. .+++++.++.++
T Consensus 230 ~~~S~SK~~g~~G~RiG~i~~---~~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~ 296 (386)
T PRK07550 230 HLYSFSKSYALTGHRVGAVVA---SPARIAEIEKFMD----TVAICAPRIGQIAVAWGLPNL------ADWRAGNRAEIA 296 (386)
T ss_pred EEecchhhccCcccceEeeec---CHHHHHHHHHHHh----hcccCCCcHHHHHHHHHhccH------HHHHHHHHHHHH
Confidence 999999999999999999854 6776666554332 233456788888888887641 345567788899
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCc
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSL 392 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~ 392 (410)
++++.+.+.|. ... + +.. .+.+++|.|+.+ + .+++.++++++||.+.||. ||+++..++
T Consensus 297 ~~~~~l~~~L~-~~~--~-~~~-~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~ 371 (386)
T PRK07550 297 RRRDAFRAVFA-RLP--G-WEL-LASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADV 371 (386)
T ss_pred HHHHHHHHHHH-hCC--C-cee-CCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCH
Confidence 99999999998 652 1 333 356789999744 2 3456777777899999861 999987688
Q ss_pred ccHHHHHHHHHHH
Q 015283 393 AKCEYLADAIIDS 405 (410)
Q Consensus 393 ~~i~~~~~~l~~~ 405 (410)
+++++++++|++.
T Consensus 372 ~~~~~~~~~l~~~ 384 (386)
T PRK07550 372 AGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHHHHhh
Confidence 8999999999875
No 59
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-43 Score=335.65 Aligned_cols=368 Identities=16% Similarity=0.164 Sum_probs=278.9
Q ss_pred cccccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK 84 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 84 (410)
|++..++....++.+..+...... ..+.++++|+.|.+ ..+ +++.+.+++.+.... ...|++..|.+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~~~~a~~~~~~~--~~~Y~~~~g~~~lr~ 73 (397)
T PRK07568 1 MKISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQP----DIK-TPEVFFEAIKNYDEE--VLAYSHSQGIPELRE 73 (397)
T ss_pred CchhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCC----CCC-CCHHHHHHHHHHhcC--CcCcCCCCCCHHHHH
Confidence 445555666666666555443322 12346899999987 332 267888888765432 367988999999999
Q ss_pred HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283 85 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 164 (410)
Q Consensus 85 aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 164 (410)
++++++. .++..+++++|++ |+|+++++.+++. ..+.+||+|++++|+|..+...++..|.+++.+++.+++++.
T Consensus 74 ~ia~~~~-~~~~~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~ 148 (397)
T PRK07568 74 AFAKYYK-KWGIDVEPDEILI--TNGGSEAILFAMM--AICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFH 148 (397)
T ss_pred HHHHHHH-HhCCCCCcceEEE--cCChHHHHHHHHH--HhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence 9999986 4667778899999 9999999999843 336799999999999999998889999999999874344444
Q ss_pred -cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283 165 -LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243 (410)
Q Consensus 165 -~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 243 (410)
.+++.+++.+++ ++.++++++|+||||.+++.+++++|+++|+++|+++|+||+|.+|.+.+. ...++..+.+.
T Consensus 149 ~~~~~~l~~~~~~---~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~s~~~~~~~ 223 (397)
T PRK07568 149 LPSKEEIEKLITP---KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL--KYTSALSLEGL 223 (397)
T ss_pred CCCHHHHHHhcCc---cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC--CccChhhcCCC
Confidence 357888888764 567777899999999999999999999999999999999999999986421 12232232223
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
.+++++++||||.||++|+|+||+ ++.++++++++..... . ..+++.+.|.++..+|++. ++++++.
T Consensus 224 ~~~~i~~~S~SK~~~~~G~R~G~~--~~~~~~~~~~~~~~~~----~-~~~~s~~~q~~~~~~l~~~------~~~~~~~ 290 (397)
T PRK07568 224 EDRVIIIDSVSKRYSACGARIGCL--ISKNKELIAAAMKLCQ----A-RLSPPTLEQIGAAALLDTP------ESYFDEV 290 (397)
T ss_pred cCCEEEEecchhhccCCCcceEEE--ecCCHHHHHHHHHHhh----c-cCCCCcHHHHHHHHHhhCC------HHHHHHH
Confidence 568999999999999999999998 4455676665543322 1 2356777888888888753 2346788
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----HHHHHHhhhc-----CcEEEcCC-----------C
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNK-----WHVYMTKD-----------G 383 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~-----~gi~v~~~-----------g 383 (410)
++.++++++.+.+.|+ +++. +.+..|.+++|+|+.+. .++...++++ +||.+.|| +
T Consensus 291 ~~~~~~~~~~l~~~L~-~~~~---~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~ 366 (397)
T PRK07568 291 REEYKKRRDILYEELN-KIPG---VVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKN 366 (397)
T ss_pred HHHHHHHHHHHHHHHh-cCCC---ceecCCCcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCC
Confidence 8899999999999998 7631 46677888999998662 3456666653 59999874 1
Q ss_pred --eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 384 --RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 --Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++. +++++++++++|++++++.
T Consensus 367 ~iRls~~~-~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 367 EIRIAYVL-NEEDLKRAMEILKEALEKY 393 (397)
T ss_pred eEEEEEeC-CHHHHHHHHHHHHHHHHHh
Confidence 999976 7899999999999988753
No 60
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.5e-42 Score=333.28 Aligned_cols=373 Identities=16% Similarity=0.120 Sum_probs=273.2
Q ss_pred CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
++...++..+..+....+. ..++++++|+.|.| +..+.+ .++.+.+++.+.+.. ...|++..|.+++|++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~-~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~ 84 (404)
T PRK09265 9 KLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNP-APFGFE-APDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQY 84 (404)
T ss_pred HHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCC-CcCCCC-CCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHH
Confidence 3444454444334333332 23467899999987 222322 267777777665543 36799999999999999999
Q ss_pred hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283 90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169 (410)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 169 (410)
+.......+++++|++ ++|+++++.+++. ..+.+||+|++++|+|..+...+...|.+++.+++..++++.+|+++
T Consensus 85 ~~~~~~~~~~~~~i~~--t~G~~~~l~~~~~--~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~ 160 (404)
T PRK09265 85 YQQKGIPDVDVDDIYI--GNGVSELIVMAMQ--ALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDD 160 (404)
T ss_pred HhccCCCCCCcccEEE--eCChHHHHHHHHH--HhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHH
Confidence 8755444677899999 9999999988743 34679999999999999999999989999888877444567899999
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+++.+.. ++.++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+. ...++++
T Consensus 161 l~~~~~~---~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~vi~ 234 (404)
T PRK09265 161 IRSKITP---RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASLA-PDLLCVT 234 (404)
T ss_pred HHHhccc---cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHcC-CCceEEE
Confidence 9988864 567777789999999999999999999999999999999999999886421 112222221 2236899
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
++||||.+|+||+|+||++. ..+++..+.+.+.+... .....+++.++|.++..+|.+.+.. . ...+.++++.+
T Consensus 235 ~~S~SK~~~~pGlRiG~~v~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~---~-~~~~~~~~~~~ 308 (404)
T PRK09265 235 FNGLSKAYRVAGFRVGWMVL-SGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSI---N-ELILPGGRLYE 308 (404)
T ss_pred EecchhhccCcccceEEEEE-eCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhH---H-HHHHHHHHHHH
Confidence 99999999999999999842 23455444444444322 1223456777888888888654321 1 12223356777
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---------HHHHHHhhhcCcEEEcCCC----------eEEecCC
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---------KAQSDNMTNKWHVYMTKDG----------RISLAGL 390 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ll~~~gi~v~~~g----------Ris~~~~ 390 (410)
+++.+.+.|+ +++ + +.+..|.+|+|+|+.+. .+++.++++++||.+.||. ||+++.
T Consensus 309 ~r~~~~~~L~-~~~--~-~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~- 383 (404)
T PRK09265 309 QRDRAWELLN-AIP--G-VSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLP- 383 (404)
T ss_pred HHHHHHHHHh-cCC--C-CcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCC-
Confidence 8888999998 763 1 56788899999997542 2456677777899998861 999964
Q ss_pred CcccHHHHHHHHHHHhhhc
Q 015283 391 SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++++|+++++..
T Consensus 384 ~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 384 RVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8899999999999988753
No 61
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=7.6e-43 Score=334.33 Aligned_cols=343 Identities=13% Similarity=0.135 Sum_probs=262.8
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCCh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 111 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~gg 111 (410)
++++++|+.|.| ..+ .++.+.+++.+.........|++..|.+++|+++++++.+.++..++++ ++++ |+|+
T Consensus 28 ~~~~i~l~~g~p----~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~--t~G~ 100 (395)
T PRK08175 28 GEDIIDFSMGNP----DGP-TPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIV--TIGS 100 (395)
T ss_pred CCCeEEcCCCCC----CCC-CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccCc
Confidence 467899999987 222 2455666665554333347799999999999999999987777777776 7999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++.++. ...+.+||+|++++|+|+.+...++..|.+++.+++.++. .+.+++++.++...++++++++++|||
T Consensus 101 ~~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~---~~~~~l~~~l~~~~~~~~~v~i~~p~N 175 (395)
T PRK08175 101 KEGLAHLM--LATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV---DFFNELERAIRESYPKPKMMILGFPSN 175 (395)
T ss_pred HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCC---CcHHHHHHHHhhccCCceEEEEeCCCC
Confidence 99999873 3447799999999999999999889999999999884332 246778777765334567777789999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+.+++++||||.||+||+|+||++.
T Consensus 176 PtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-- 251 (395)
T PRK08175 176 PTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW--KAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-- 251 (395)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC--CCcchhcCCCcccCEEEEeeccccccCcchhheeeeC--
Confidence 999999999999999999999999999999998876421 1112212111235788999999999999999999754
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++++.+.. .....+++...|.++..++.+. .+++++.++.++++++++.+.|+ ..+ +.+.
T Consensus 252 -~~~l~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~ 315 (395)
T PRK08175 252 -NPELVSALARIK----SYHDYGTFTPLQVAAIAALEGD------QQCVRDIAEQYKRRRDVLVKGLH-EAG----WMVE 315 (395)
T ss_pred -CHHHHHHHHHHH----hhcccCCCcHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HcC----Cccc
Confidence 778666654422 2122345555677777777543 34567889999999999999998 776 4666
Q ss_pred cCCcceeeecCCC--------HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 352 LRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 352 ~~~~~~~~~~~~~--------~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.+.+|+|+|+.+. .+++.++++++||.+.|+. ||+++. +++.+.+++++|++++.+
T Consensus 316 ~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 316 MPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred CCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence 7888999998652 3456677777899999971 999975 889999999999998865
No 62
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.5e-42 Score=327.15 Aligned_cols=330 Identities=14% Similarity=0.115 Sum_probs=259.1
Q ss_pred eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhH
Q 015283 36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGS 114 (410)
Q Consensus 36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a 114 (410)
+++|+.|.| ..++ ++.+.+++.+.... ...|++..|.++||+++++++.+.+|+.++++ +|++ |+|++++
T Consensus 2 ~~~~~~g~p----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~~a 72 (350)
T TIGR03537 2 LFDFGTGDP----KEPT-PPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSKEA 72 (350)
T ss_pred eEeccCCCC----CCCC-CHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChHHH
Confidence 578999987 3333 67888888876542 46798889999999999999987778888887 8999 9999999
Q ss_pred HHHHHHHHHHhCCC---CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 115 LRLAAALIERYFPG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 115 ~~~~~~~~~~~~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
+..+. ...+.+| |+|+++.|+|+.|...++..|.+++.+++.+++++.+|++.+++.+++ +++++++++|+|
T Consensus 73 i~~~~--~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~N 147 (350)
T TIGR03537 73 IFHFP--LVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE---ETKIVWINYPHN 147 (350)
T ss_pred HHHHH--HHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh---ccEEEEEeCCCC
Confidence 99874 3336676 699999999999999999999999999985456788999999998875 567777889999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+++.+++++|+++|+++|++||+||+|..+.+++ ...++... ..+++++++|+||.+|++|+|+||++.
T Consensus 148 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~-- 220 (350)
T TIGR03537 148 PTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE---PPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAG-- 220 (350)
T ss_pred CcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC---CCCchhhc--CcCCEEEEeecccccCCccccceeeec--
Confidence 99999999999999999999999999999999876542 11122111 235899999999999999999999743
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++.+++.... .....+++..+|.++...+.+.+ +.++.+++++++++.+.+.|+ +.| +++.
T Consensus 221 -~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~r~~l~~~~~~~~~~l~-~~g----~~~~ 283 (350)
T TIGR03537 221 -DEKLISFLRKLR----ANFGVASPDFVQAAAKAAWSDDN-------HVLERRKIFKRKRDLFIEFFN-KVG----LEYL 283 (350)
T ss_pred -CHHHHHHHHHHH----HhhccCCCHHHHHHHHHHhCCcH-------HHHHHHHHHHHHHHHHHHHHH-HCC----Cccc
Confidence 777666555432 22223455566676655565432 245678889999999999998 776 4667
Q ss_pred cCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHH
Q 015283 352 LRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 352 ~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
.+.+++|+|+.+ + .++++.+++ +||.+.||. ||+++. +++++++++++|+++
T Consensus 284 ~~~g~~~~~~~~~~~~~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~-~~~~~~~~l~~~~~~ 350 (350)
T TIGR03537 284 YPDATFYLWVKVPSGIDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVP-TLEECEEALRLWERV 350 (350)
T ss_pred CCCeEEEEEEECCCCCCHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHhcC
Confidence 788899998854 2 345666665 699999862 999974 889999999998763
No 63
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-43 Score=339.31 Aligned_cols=339 Identities=14% Similarity=0.104 Sum_probs=250.3
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCC-CCCcc-c--CCceEEEecCC
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA-DNSVL-K--EQRVATVQGLS 110 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~-~~~~~-~--~~~i~~~~t~g 110 (410)
++|+|+.|.| +.++ ++.+.++.. .+.. ..|+++.|.+++|+++++++... .+... . +++|++ |+|
T Consensus 101 ~~i~l~~g~p----~~~~-~~~v~e~~~-~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~G 169 (527)
T PRK09275 101 DAVSYVRDQL----GFDA-DEFVYELVD-GIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VEG 169 (527)
T ss_pred HHHhhcCCCC----CCCC-CHHHHHHHH-HHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 4699999998 6554 677777444 4432 34999999999999999965443 22221 2 348988 999
Q ss_pred hhhHHHHHHHHH---HHhCCCCEEEEcCCCCcchhhhhhhCCCCc--cceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283 111 GTGSLRLAAALI---ERYFPGAKVLISSPTWGNHKNIFNDARVPW--SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 185 (410)
Q Consensus 111 gt~a~~~~~~~~---~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~--~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii 185 (410)
+++++..++..+ ..+.|||+|++++|+|+.|...++..|..+ +.++..++++|.+|++++++++.+ ++++++
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~---~tkai~ 246 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP---SIKALF 246 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC---CCCEEE
Confidence 999999885432 146799999999999999999888765544 555544456789999999987764 677888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 263 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 263 (410)
+++||||||.++|.+++++|+++|++ ++++||+||+|..|.+. ..++... ..+++|+++||||.|+++|||
T Consensus 247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~s~~~~--~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-----FRSLFAV--LPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-----ccCHHHh--CCCCEEEEeehhhhccCcHhH
Confidence 88999999999999999999999965 59999999999998742 1122111 235899999999999999999
Q ss_pred cceEEEEeCCchhHHHHHHHH--------------------------------HhhccCcccCCChhHHHH-----HHHH
Q 015283 264 IGAMNVVCSSSDLAARVKSQL--------------------------------KRLARPMYSNPPVHGARI-----VANV 306 (410)
Q Consensus 264 ~G~l~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~-----a~~~ 306 (410)
+||++ ++++++.+++.+.+ +.....++.+.+...|.+ +..+
T Consensus 320 lG~i~--~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~al 397 (527)
T PRK09275 320 LGVIA--LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFAL 397 (527)
T ss_pred Hhhhh--cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 99984 44433333332212 333344455566656664 2233
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---------------------H
Q 015283 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---------------------K 365 (410)
Q Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---------------------~ 365 (410)
|+.. .+++++.++.++++++.+.+.|. . + +...++++++|+|+++. .
T Consensus 398 l~~~------~~~~~~~~~~~~~Rr~~l~~~Lg-~-~----~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 398 LDEE------DAYKKAMKDIIRRRYKALYEGLG-L-P----EPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPV 465 (527)
T ss_pred HhCc------hHHHHHHHHHHHHHHHHHHHHcC-C-C----CcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHH
Confidence 4432 34467888999999999988774 2 2 34457899999998542 2
Q ss_pred HHHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 366 AQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 366 ~~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+++.+|+++.||.+.||. |||+++++++++.++.++|++++.+
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 457799999999999983 9999987889999999999999865
No 64
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=334.65 Aligned_cols=347 Identities=15% Similarity=0.180 Sum_probs=280.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc---CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
+.+++|+.|.+ +..-+| ...+.+++.+.... .....|.+..|.++||+++++++....|..+++++|++ |+|
T Consensus 89 ~~~i~f~~g~p-~~~~fp--~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T~G 163 (459)
T COG1167 89 PSVIDFAGGLP-DPSLFP--LEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--TSG 163 (459)
T ss_pred CceecCCCCCC-CcccCC--HHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--eCC
Confidence 67899999986 332322 36666666665522 21367878899999999999998878899999999999 999
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
+++|++++.+++ +.|||+|++.+|+|.....+++.+|++++.||+. ..++|++.+++.+.+. +...++++++.|
T Consensus 164 ~q~al~l~~~~l--~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~-~~k~~y~~P~~q 237 (459)
T COG1167 164 AQQALDLLLRLL--LDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQW-KPKAVYVTPTFQ 237 (459)
T ss_pred HHHHHHHHHHHh--CCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhc-CCcEEEECCCCC
Confidence 999999985444 6699999999999999999999999999999983 4569999999999874 345667788889
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||||.++|.++.++|+++|++|+++||+||+|+.|.+++.. ..++ ...+..++||+++||||++. ||+|+||+++
T Consensus 238 NPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p--~~~l-~~ld~~~rViy~gSFSK~l~-PglRlG~vv~- 312 (459)
T COG1167 238 NPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPP--PPPL-KALDAPGRVIYLGSFSKTLA-PGLRLGYVVA- 312 (459)
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCC--CCCh-HhhCCCCCEEEEeeehhhcc-cccceeeeeC-
Confidence 99999999999999999999999999999999999976322 2122 22345679999999999996 9999999855
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
++++++++.... ......++.+.|.+++..+.++.+ .++++++++.++++++.+.+.|+ +... ....+
T Consensus 313 --p~~~~~~~~~~k----~~~~~~~s~~~Q~~la~~l~~G~~----~~hl~~lR~~y~~rr~~l~~~L~-~~~~-~~~~~ 380 (459)
T COG1167 313 --PPELIEKLLRLK----QAADLGPSSLSQAALAAFLLSGHY----DRHLRRLRREYARRRDALLEALA-EYLP-ELATW 380 (459)
T ss_pred --CHHHHHHHHHHH----HHhcCCCChHHHHHHHHHHHcCCH----HHHHHHHHHHHHHHHHHHHHHHH-HhCC-CCeee
Confidence 778666655533 234557888998888888876654 77889999999999999999998 6642 22577
Q ss_pred ccCCcceeeecCC----C-HHHHHHhhhcCcEEEcC-CC------------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 351 ILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTK-DG------------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 351 ~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~-~g------------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..|.+|+|+|+.+ + .+++.++++ .|+.+.| |. |++++..+++++++++++|.+++.+.
T Consensus 381 ~~p~gG~flwl~l~~~~~~~~l~~~a~~-~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 381 TRPEGGLFLWLELPEGIDARELLAAALE-KGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred ecCCceEEEEEEcCCCCCHHHHHHHHHH-CCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 8899999999966 3 345666665 5898888 41 99999989999999999999998753
No 65
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.4e-42 Score=336.16 Aligned_cols=331 Identities=17% Similarity=0.150 Sum_probs=259.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
..+++|+.|.| ..+ .+|.+.+++.+.... ...|++..|.+++|+++++++....+ .+++|++ |+|+++
T Consensus 85 ~~~i~L~~g~p----~~~-~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iii--t~G~~~ 152 (431)
T PRK15481 85 TPLHDLAGGNP----DPQ-RLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDL--TSGAID 152 (431)
T ss_pred chhhhhhcCCC----Chh-HhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEE--ecCcHH
Confidence 35789998876 222 245677777665432 35798899999999999999754322 2468999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.++. ...+.|||.|++++|+|+.|...++..|++++.+++. + .++|++.+++.+++ +...++++++|||||
T Consensus 153 al~~~~--~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~--~g~~~~~l~~~~~~--~~k~i~~~p~p~NPT 225 (431)
T PRK15481 153 AIERLL--CAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVD-A--EGMQPEKLERALAQ--GARAVILTPRAHNPT 225 (431)
T ss_pred HHHHHH--HHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccC-C--CCCCHHHHHHHHhc--CCCEEEECCCCCCCC
Confidence 999984 3346799999999999999999999999999999983 2 24899999998865 233445556999999
Q ss_pred CCCCCHHHHHHHHHHHHHc-CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 194 GIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
|.++|.+++++|+++|+++ +++||+||+|.+|.+.+. . +. +....+++++++||||.|+ ||+|+||++.
T Consensus 226 G~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~---~~--~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~--- 295 (431)
T PRK15481 226 GCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY-H---SV--IPQTTQRWALIRSVSKALG-PDLRLAFVAS--- 295 (431)
T ss_pred CccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC-C---CC--CcCCCCCEEEEeeeccccC-CCceeEEEeC---
Confidence 9999999999999999999 999999999999875321 1 11 1113458999999999999 9999999754
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++++..... ....+.+.++|.++..+|+++++ .+++++.++.++++++.+.+.|+ +.+ +.+..
T Consensus 296 ~~~~~~~~~~~~~----~~~~~~s~~~q~a~~~~l~~~~~----~~~l~~~~~~~~~~r~~~~~~L~-~~~----~~~~~ 362 (431)
T PRK15481 296 DSATSARLRLRLN----SGTQWVSHLLQDLVYACLTDPEY----QARLAQARLFYAQRRQKLARALQ-QYG----IAIPS 362 (431)
T ss_pred CHHHHHHHHHHHh----ccccCCCHHHHHHHHHHHhCccH----HHHHHHHHHHHHHHHHHHHHHHH-HcC----Ccccc
Confidence 7786666643322 12235678889999999988654 45678899999999999999998 776 46667
Q ss_pred CCcceeeecCCC---HHHHHHhhhcCcEEEcCCC-----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283 353 RQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 353 ~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g-----------Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
|.+|+|+|+.+. .++++.+. ++||.+.||. |||++..+++++++++++|+++++
T Consensus 363 p~gg~f~~~~l~~~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 363 PGDGLNLWLPLDTDSQATALTLA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred CCCeEEEEEECCCCHHHHHHHHH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 889999999773 34556665 4799998851 999998789999999999999875
No 66
>PLN02368 alanine transaminase
Probab=100.00 E-value=3e-42 Score=327.76 Aligned_cols=343 Identities=15% Similarity=0.124 Sum_probs=252.6
Q ss_pred CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCC-----Cc----------------c-----cccHHHHHHHHH
Q 015283 12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEE-----LQ----------------P-----YVLDVVKKAENL 63 (410)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~-----~~----------------~-----~~~~~v~~a~~~ 63 (410)
++..++...+..+..+..+ ....++|+|++|+| |.. ++ | ..++.+.++...
T Consensus 14 ~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~P-d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~ 92 (407)
T PLN02368 14 NVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNP-HALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHY 92 (407)
T ss_pred HHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCCh-hHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHH
Confidence 3444555545444433332 23458999999998 211 01 1 124556566544
Q ss_pred hh-ccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcch
Q 015283 64 ML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNH 141 (410)
Q Consensus 64 ~~-~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~ 141 (410)
.. .......|++..|.++||+++++++.+.+|..+++++|++ |+|+++++..++ ...+ .+||.|++++|+|+.|
T Consensus 93 l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~--~~l~~~pGd~Vli~~P~Y~~y 168 (407)
T PLN02368 93 LSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFL--TDGASKGVMQIL--NAVIRGEKDGVLVPVPQYPLY 168 (407)
T ss_pred HhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--cccHHHHHHHHH--HHHcCCCCCEEEEeCCCCccH
Confidence 32 2222378999999999999999999887788888999999 999999999873 3345 5999999999999999
Q ss_pred hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
...++..|++++.+++.++++|.+|++.+++.+++. ..+++++++++||||||.+++.+++++|+++|++||++||+
T Consensus 169 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~ 248 (407)
T PLN02368 169 SATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG 248 (407)
T ss_pred HHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 999999999999999866667899999999988641 12567788899999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCchhHhHHHhh-------cCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283 219 DVAYQGFASGSLDNDASSVRLFAT-------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARP 290 (410)
Q Consensus 219 Deay~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~ 290 (410)
||+|.++.+++. ....++..+.. ..+++|+++||||.| +++|||+||+++...++++++++... ...
T Consensus 249 DE~Y~~l~y~~~-~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~----~~~ 323 (407)
T PLN02368 249 DEVYQQNIYQDE-RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKV----ASI 323 (407)
T ss_pred EccccccccCCC-CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHH----hcc
Confidence 999999987531 11223222211 134899999999998 89999999984211466765555442 222
Q ss_pred cccCCChhHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C
Q 015283 291 MYSNPPVHGARIVANVVGNPA----LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N 364 (410)
Q Consensus 291 ~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~ 364 (410)
..+++.++|.++..+|++.. ....|.++++++++.++++++.+.+.|. +++. +.+..|++++|+|+++ .
T Consensus 324 -~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~-~~~g---~~~~~P~Gafy~~~~i~lp 398 (407)
T PLN02368 324 -ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFN-SCKN---VVCNFTEGAMYSFPQIKLP 398 (407)
T ss_pred -cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC---eEeCCCCeeeEeccCCCCC
Confidence 23577888999988887542 1122445556788999999999999999 8731 5778899999999754 4
Q ss_pred HHHHH
Q 015283 365 KAQSD 369 (410)
Q Consensus 365 ~~~~~ 369 (410)
.+.++
T Consensus 399 ~~~~~ 403 (407)
T PLN02368 399 PKAIE 403 (407)
T ss_pred HHHHH
Confidence 44443
No 67
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=4.8e-43 Score=332.99 Aligned_cols=345 Identities=20% Similarity=0.244 Sum_probs=272.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHH-hhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 112 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt 112 (410)
++|||+.|.+....+++. ++.+.++..+ .........|++..|.+++|+++++++.+..+..++++ +|++ ++|++
T Consensus 2 ~~I~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPP-PPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSSHH-HHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHHH
T ss_pred CEEEEECCCCCCcccccc-hHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--ecccc
Confidence 589999999955555533 5666666655 33333348899999999999999999886677778888 8988 77777
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC---CcEEEEeCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFILLHGCA 189 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~---~~~~ii~~~p 189 (410)
+++..+..++. ..+||.|++++|+|+.|...++..|.+++.+++..++++.+|++.+++.+++.+. ++.++++++|
T Consensus 79 ~~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p 157 (363)
T PF00155_consen 79 AALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNP 157 (363)
T ss_dssp HHHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESS
T ss_pred cchhhhhhccc-ccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccc
Confidence 77777632221 4599999999999999999999999999999987678899999999999987321 3567778999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
+||||.+++.+++++|+++|++||++||+||+|.++.+++ .+............++++++|+||.||++|+|+||+++
T Consensus 158 ~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~ 235 (363)
T PF00155_consen 158 NNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGD--PDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA 235 (363)
T ss_dssp BTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSS--SHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE
T ss_pred ccccccccccccccchhhhhcccccceeeeeceeccccCC--CccCcccccccccccceeeeeccccccccccccccccc
Confidence 9999999999999999999999999999999999999763 23323234455556799999999999999999999854
Q ss_pred EeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283 270 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 349 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 349 (410)
++++++.+..... . +.. +...+.++..++.+.... .+++++.+++++++++.+.+.|+ +.+ +.
T Consensus 236 ---~~~~~~~l~~~~~----~-~~~-~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~-~~~----~~ 298 (363)
T PF00155_consen 236 ---PPELIERLRRFQR----S-GLS-SSPMQAAAAAALSDPELV---EKWLEELRERLRENRDLLREALE-EIG----IT 298 (363)
T ss_dssp ---EHHHHHHHHHHHH----H-TTS-SHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-HTT----SE
T ss_pred ---hhhhhhhhhhccc----c-ccc-cchhhHHHHHhhhccccc---ccccccchhhHHHHHHHHHHHHH-Hhh----hh
Confidence 7776666554332 2 222 777777777777765432 33678999999999999999998 776 57
Q ss_pred cccCCcceeeecCCC----HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHH
Q 015283 350 FILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAI 402 (410)
Q Consensus 350 ~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l 402 (410)
+..+.+++|.|+.++ .++.++|++++||.+.|+. ||+++..+++++++++++|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 299 VLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred eeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 788889999998764 3567888886799999963 9999666999999999986
No 68
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=4.5e-42 Score=325.70 Aligned_cols=348 Identities=15% Similarity=0.130 Sum_probs=261.0
Q ss_pred cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 86 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai 86 (410)
|.+++++...+.+.+.+++...... ..++++|+.|.| ..+ .++.+.+++.+.... ..|++..|.+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~p----~~~-~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~i 71 (364)
T PRK07865 1 MPVSARLPDFPWDTLAPAKATAAAH-PDGIVDLSVGTP----VDP-VPPVIQEALAAAADA---PGYPTTAGTPELREAI 71 (364)
T ss_pred CCccccCCCccHHHHHHHHHHHHhc-CCCEEEcCCCCC----CCC-CCHHHHHHHHHHHhh---CCCCCccCCHHHHHHH
Confidence 5677788888877666655444332 346899999987 222 257777877665422 5798889999999999
Q ss_pred HHHhcCCCCCc-ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283 87 AELLFGADNSV-LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 165 (410)
Q Consensus 87 a~~~~~~~~~~-~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (410)
++++.+.++.. +++++|++ |+|+++++..+..++ .+.+||.|++++|+|+.|...++..|++++.++.
T Consensus 72 a~~l~~~~~~~~~~~~~I~i--t~G~~~~i~~~~~~l-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------- 140 (364)
T PRK07865 72 VGWLARRRGVTGLDPAAVLP--VIGSKELVAWLPTLL-GLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------- 140 (364)
T ss_pred HHHHHHHcCCCCCCcccEEE--ccChHHHHHHHHHHH-cCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC--------
Confidence 99998777776 88999999 999999998863222 1469999999999999999999999998877642
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH--hhc
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATR 243 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~~~ 243 (410)
++++.. .+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.+ .....+... ...
T Consensus 141 -~~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~ 211 (364)
T PRK07865 141 -LTELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDA--EPVSILDPRVCGGD 211 (364)
T ss_pred -hhhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCC--CCCccccccccCCc
Confidence 222221 256677778999999999999999999999999999999999999887642 111111110 012
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
.+++++++||||.++++|+|+||++. ++++++++..... .....++.+.|.++..+|.+.+ +.++.
T Consensus 212 ~~~~i~~~S~SK~~~~~GlRiG~i~~---~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~-------~~~~~ 277 (364)
T PRK07865 212 HTGLLAVHSLSKQSNLAGYRAGFVAG---DPALVAELLEVRK----HAGMMVPAPVQAAMVAALGDDA-------HVREQ 277 (364)
T ss_pred cceEEEEeechhccCCCceeeEEEec---CHHHHHHHHHHHH----hcCCCcCHHHHHHHHHHhCCHH-------HHHHH
Confidence 35899999999999999999999743 7886666554332 1223466778888888887642 34677
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCCC----------eEEecCCC
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLS 391 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~ 391 (410)
++.++++++.+.+.|+ +.| +.+..+++++|+|+.+ +...+.+.++++||.+.||. ||+++. +
T Consensus 278 ~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~ 351 (364)
T PRK07865 278 RERYARRRAVLRPALE-AAG----FRVDHSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-T 351 (364)
T ss_pred HHHHHHHHHHHHHHHH-HcC----CcccCCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-C
Confidence 8888999999999998 776 4666788899999865 33333444456799998851 999987 7
Q ss_pred cccHHHHHHHHH
Q 015283 392 LAKCEYLADAII 403 (410)
Q Consensus 392 ~~~i~~~~~~l~ 403 (410)
++++++++++|+
T Consensus 352 ~~~~~~~~~~l~ 363 (364)
T PRK07865 352 DERIAAAVERLA 363 (364)
T ss_pred HHHHHHHHHHhh
Confidence 899999999885
No 69
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.1e-41 Score=324.86 Aligned_cols=337 Identities=16% Similarity=0.141 Sum_probs=249.9
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
.+++++|+.|++ ..+ +++.+.+++.+.+... ....|.|..|.+++|+++++++.+. .+++++|++ |
T Consensus 32 ~~~~i~l~~~~~----~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~i--t 101 (402)
T TIGR03542 32 SADIIRLGIGDT----TQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFI--S 101 (402)
T ss_pred CCCeEEcCCCCC----CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEE--C
Confidence 457899999987 332 3677888777665431 2256988899999999999986332 256899999 9
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC-----------CccceeeecCCCcccChhhHHHHHhcC
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV-----------PWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
+|+++++..+ ...+.+||+|++++|+|..|...++..|+ +++.+++.+++++.+|++. .
T Consensus 102 ~Ga~~al~~l---~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~- 171 (402)
T TIGR03542 102 DGAKCDVFRL---QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------E- 171 (402)
T ss_pred CCcHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------c-
Confidence 9999999875 33467999999999999999999999999 8888887434445555321 1
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
.+++++++++||||||.++|.+++++|+++|++|+++||+||+|.+|.+++. ...++..+....+++++++||||.|
T Consensus 172 -~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 172 -PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred -CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCCCcccEEEEecCcccc
Confidence 2566777789999999999999999999999999999999999999886421 1112212111235789999999999
Q ss_pred cccCCCcceEEEEeCCchhH----HHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLA----ARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK 333 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (410)
|+||+|+||+++ +++++ +.+.............+++.++|.++..++.+..+ +...+.++.++++++.
T Consensus 249 g~pGlRiG~~i~---~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~ 320 (402)
T TIGR03542 249 GFTGVRLGWTVV---PKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL-----QPILEAISYYMENARI 320 (402)
T ss_pred CCCCcceEEEEe---cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch-----hHHHHHHHHHHHHHHH
Confidence 999999999854 66654 11122221111122335677888888888876543 2245667888999999
Q ss_pred HHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHH
Q 015283 334 LFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYL 398 (410)
Q Consensus 334 l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~ 398 (410)
+.+.|+ +.+ +.+..+.+++|+|+.+ + .+++..++++.||.+.||. ||+++. ++++++++
T Consensus 321 ~~~~L~-~~~----~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~ 394 (402)
T TIGR03542 321 LRKALE-AAG----FKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVEA 394 (402)
T ss_pred HHHHHH-hcC----ceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHH
Confidence 999998 765 4666677899999865 2 3567788877799999862 999877 88999999
Q ss_pred HHHHHHHh
Q 015283 399 ADAIIDSY 406 (410)
Q Consensus 399 ~~~l~~~l 406 (410)
+++|+++|
T Consensus 395 l~~l~~~~ 402 (402)
T TIGR03542 395 CERIKEAL 402 (402)
T ss_pred HHHHHhhC
Confidence 99998864
No 70
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.3e-41 Score=326.06 Aligned_cols=339 Identities=12% Similarity=0.075 Sum_probs=243.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH-HhcCCCCCc-ccCC--ceEEEecCC
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE-LLFGADNSV-LKEQ--RVATVQGLS 110 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~-~~~~~~~~~-~~~~--~i~~~~t~g 110 (410)
++|+++.|.| +.++ +....++.+.+.. ..|+++.|..++++++++ |+.+..+.. ..++ +|++ |+|
T Consensus 95 ~~i~l~~g~p----~~~~--~~~~~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~G 163 (521)
T TIGR03801 95 DIISYVIDQL----GFDP--DAFLYEMCDGIIG---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VEG 163 (521)
T ss_pred HHHhhcCCCC----CCCC--CHHHHHHHHHhhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 4689999998 5552 3444555554422 358777888888888885 544443322 2333 7988 999
Q ss_pred hhhHHHHHHHHHH---HhCCCCEEEEcCCCCcchhhhhhhC--CCCccceeeecCCC-----cccChhhHHHHHhcCCCC
Q 015283 111 GTGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFNDA--RVPWSEYRYYDPKT-----VGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 111 gt~a~~~~~~~~~---~~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~-----~~~d~~~l~~~i~~~~~~ 180 (410)
+++++..++..+. .+.|||+|+++.|+|+.|...++.. |.+++.++..++++ |.+|.+++++.+.+ +
T Consensus 164 at~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~---~ 240 (521)
T TIGR03801 164 GTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP---S 240 (521)
T ss_pred HHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC---C
Confidence 9999998754321 3669999999999999999987765 66777777643333 88999999887654 6
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
+++++++||+||||.++|.+++++|+++|++| +++||+||+|..|.+. ..++... ..+++|+++||||.||
T Consensus 241 ~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~sl~~~--~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 241 IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-----FRSLFAE--LPYNTIGVYSFSKYFG 313 (521)
T ss_pred CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-----ccchhhh--CCCCEEEEEcchhhcc
Confidence 77788889999999999999999999999986 9999999999988742 1122121 2358999999999999
Q ss_pred ccCCCcceEEEEeCCchhHHHHH--------------------------------HHHHhhccCcccCCChhHHH--H--
Q 015283 259 LYAERIGAMNVVCSSSDLAARVK--------------------------------SQLKRLARPMYSNPPVHGAR--I-- 302 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~--~-- 302 (410)
++|||+||++ ..++++.+++. ...+.....++.+.+...|. +
T Consensus 314 ~~G~RlG~i~--~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~ 391 (521)
T TIGR03801 314 ATGWRLGTIA--LHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALF 391 (521)
T ss_pred Cchhhhhhhh--cCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHH
Confidence 9999999984 34333322222 11122333333444444443 3
Q ss_pred -HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------------
Q 015283 303 -VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------------- 364 (410)
Q Consensus 303 -a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------------- 364 (410)
+..++... .++.++.++.++++++.+.+.|. - . +...++++++|+|+++.
T Consensus 392 a~~all~~~------~~y~~~~~~~~~~R~~~l~~~Lg-~-~----~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~ 459 (521)
T TIGR03801 392 SLFALMDKE------NAYKAETKDICRRREKLLFRGLG-L-P----LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKK 459 (521)
T ss_pred HHHHHhccc------hhHHHHHHHHHHHHHHHHHHhcC-C-C----CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhc
Confidence 33444432 23457888899999999888764 1 1 23456889999998652
Q ss_pred ----HHHHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 365 ----KAQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 365 ----~~~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.+++.+|+++.||.+.||. |||+++++++++.++.++|++++++
T Consensus 460 ~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 460 NYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred cCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 2457789999999999983 9999987999999999999998865
No 71
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-40 Score=317.15 Aligned_cols=333 Identities=16% Similarity=0.208 Sum_probs=249.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccCcCCcccHHHHHHHHHHhcCCC--CCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGAD--NSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~aia~~~~~~~--~~~~~~~~i~~~~t~g 110 (410)
+.+++|+.|++ ..+ +++.+.+++.+.+.... ...| |..|.++||+++++++.+.+ +..+++++|++ |+|
T Consensus 28 ~~~~~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~G 99 (374)
T PRK02610 28 IQLDRLDTNEF----PYD-LPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISV--GNG 99 (374)
T ss_pred cceeEecCCCC----CCC-CCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEE--cCC
Confidence 35789999987 333 37889999887765431 2568 45799999999999987665 46688999999 999
Q ss_pred hhhHHHHHHHHHHHhCCCC-EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-CCCcEEEEeCC
Q 015283 111 GTGSLRLAAALIERYFPGA-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHGC 188 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~~ii~~~ 188 (410)
+++++..+ +...+.+|| .|++++|+|+.|...++..|++++.+++. ++++++|++.+++.+.+. ..+++++++++
T Consensus 100 a~~al~~~--~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~ 176 (374)
T PRK02610 100 SDELIRSL--LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176 (374)
T ss_pred hHHHHHHH--HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeC
Confidence 99999876 334456775 89999999999999999999999999873 446899999999888631 12567777789
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
||||||.+++.+++++++++| ++++||+||+|.+|.+. . .+.. ....+++++++||||.+|+||+|+||++
T Consensus 177 P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~---~---~~~~-~~~~~~~ivi~SfSK~~g~~GlRiG~~v 247 (374)
T PRK02610 177 PNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT---T---LVGE-LAQHPNWVILRTFSKAFRLAAHRVGYAI 247 (374)
T ss_pred CCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc---c---hHHH-HhcCCCEEEEEecchhccCcccceeeee
Confidence 999999999999999999887 49999999999988632 1 1212 2234578999999999999999999984
Q ss_pred EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283 269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 348 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 348 (410)
. ++++++++... .. ..+.+.++|.++..++.+.+ .+.+..++.++ .++.+.+.|+ .++. +
T Consensus 248 ~---~~~l~~~l~~~----~~--~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~-~r~~l~~~L~-~~~~---~ 307 (374)
T PRK02610 248 G---HPELIAVLEKV----RL--PYNLPSFSQLAAQLALEHRQ------ELLAAIPEILQ-ERDRLYQALQ-ELPQ---L 307 (374)
T ss_pred c---CHHHHHHHHHh----cC--CCCCCHHHHHHHHHHhcCHH------HHHHHHHHHHH-HHHHHHHHHH-hCCC---c
Confidence 4 77766665442 21 22457788888888887542 22334444444 4677788887 6631 3
Q ss_pred ccccCCcceeeecCC----CHHHHHHhhhcCcEEEcCCC---eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 349 SFILRQIGMFSFTGL----NKAQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 349 ~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~~g---Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.. .+++|+|+|+.+ +...+.+.++++||.+.++. ||+++. .+++++++++|+++++++
T Consensus 308 ~~-~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 308 RV-WPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred Ee-CCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 43 477889999865 33334334456799998753 999875 567899999999998765
No 72
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-40 Score=317.56 Aligned_cols=338 Identities=19% Similarity=0.233 Sum_probs=262.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
..+++|+.|.| ..+ .++.+.+++.+..... ....|.+..|.+++|+++++++...++..+++++|++ |+|+
T Consensus 33 ~~~~~l~~g~p----~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G~ 105 (394)
T PRK06836 33 DNVFDFSLGNP----SVP-PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCGA 105 (394)
T ss_pred CCeEEecCcCC----CCC-CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCCh
Confidence 46799999876 333 3688888887765432 1367988899999999999999877777788999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++..+.. ..+.+||.|++++|+|..+...++..|++++.+++. ++++.+|++++++.+++ +++++++++|+|
T Consensus 106 ~~al~~~~~--~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~~~~---~~~~v~~~~p~N 179 (394)
T PRK06836 106 AGALNVALK--AILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTD-TDTFQPDLDALEAAITP---KTKAVIINSPNN 179 (394)
T ss_pred HHHHHHHHH--HhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecC-CccCcCCHHHHHhhcCc---CceEEEEeCCCC
Confidence 999998743 336799999999999999999999999999999984 34578999999999865 567777889999
Q ss_pred CCCCCCCHHHHHHHHHHHHH------cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283 192 PTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~------~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 265 (410)
|||.++|.+++++|+++|++ ||++||+||+|.++.+++. .... .....+++++++||||.|++||+|+|
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~---~~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPY---IFKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCC---hHHccCcEEEEecchhhccCcceeeE
Confidence 99999999999999999999 8999999999999886421 1111 12234689999999999999999999
Q ss_pred eEEEEeCCchhHH--HHHHHHHhhccC-cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 266 AMNVVCSSSDLAA--RVKSQLKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 266 ~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
|+++ +++..+ .+...+....+. .+.+++...|.++..++.+.. .++.++++++.+.+.|+ +.
T Consensus 255 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----------~~~~~~~~r~~l~~~L~-~~ 319 (394)
T PRK06836 255 YIAV---NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV-----------DVSIYKRNRDLLYDGLT-EL 319 (394)
T ss_pred EEec---CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH-----------HHHHHHHHHHHHHHHHH-hC
Confidence 9854 555322 223322222221 123567778888888887631 24567778888999998 77
Q ss_pred CCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 343 KSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 343 g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
| +.+..+.+|+|+|+.+ +...+.+.++++||.+.|| + ||+++. +++++++++++|+++++..
T Consensus 320 g----~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 320 G----FECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY 392 (394)
T ss_pred C----CEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 6 4667788899999854 3333334445679999997 2 999985 9999999999999998764
No 73
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.1e-40 Score=315.06 Aligned_cols=334 Identities=14% Similarity=0.127 Sum_probs=249.2
Q ss_pred CcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc-c
Q 015283 20 PILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-L 98 (410)
Q Consensus 20 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~-~ 98 (410)
++.+.+....+ ..+.+++|+.|.| ..+ .++.+.+++.+... ...|++..|.+++|+++++++...++.. +
T Consensus 8 ~~~~~~~~~~~-~~~~~i~l~~~~p----~~~-~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~ 78 (357)
T TIGR03539 8 SLAPYKAKAAS-HPDGIVDLSVGTP----VDP-VPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGL 78 (357)
T ss_pred HHHHHHHHhhh-CCCCeEEccCCCC----CCC-CCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCC
Confidence 34444444433 3356899999987 233 25778888776542 2679889999999999999998777876 8
Q ss_pred cCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283 99 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 99 ~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
++++|++ |+|+++++..+..++ .+.+||.|++++|+|+.+...++..|++++.++ +++.+. .
T Consensus 79 ~~~~I~i--t~G~~~~i~~~~~~l-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~----~-- 140 (357)
T TIGR03539 79 DPTAVLP--VIGTKELVAWLPTLL-GLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD----P-- 140 (357)
T ss_pred CcCeEEE--ccChHHHHHHHHHHH-cCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC----c--
Confidence 8999999 999999998863221 146999999999999999998888998887763 222221 1
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH--hhcCCcEEEEeccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKN 256 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~ 256 (410)
.+++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++. ....+... ....+++++++||||.
T Consensus 141 ~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~ 218 (357)
T TIGR03539 141 VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR--PVSILDPRVCGGDHTGLLAVHSLSKR 218 (357)
T ss_pred cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC--CccceecccCCCccccEEEEeccccc
Confidence 2567777789999999999999999999999999999999999998876421 11111000 0123579999999999
Q ss_pred ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 257 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 257 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
|+++|+|+||++. ++++++++.... .....+++..+|.++..+|.+.. +.++.++.++++++.+.+
T Consensus 219 ~~~~G~R~G~~i~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~ 284 (357)
T TIGR03539 219 SNLAGYRAGFVAG---DPALVAELLTVR----KHAGLMVPAPVQAAMVAALGDDG-------HVAEQKARYAARRAQLKP 284 (357)
T ss_pred cCCCceeEEEEec---CHHHHHHHHHHH----hhcccCCCHHHHHHHHHHcCCHH-------HHHHHHHHHHHHHHHHHH
Confidence 9999999999843 778666654432 22223567778888888887632 345678888999999999
Q ss_pred HhhhccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHH
Q 015283 337 SLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAI 402 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l 402 (410)
.|+ +.| +.+..+.+++|+|+.. +...+.+.++++||.+.|+. ||+++. +++++++++++|
T Consensus 285 ~L~-~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 285 ALE-KAG----FRIDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred HHH-HcC----CCCcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 998 776 4667788999999865 33334444556799998862 999987 788999998876
No 74
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.3e-41 Score=315.78 Aligned_cols=322 Identities=14% Similarity=0.145 Sum_probs=248.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|+|+.|++ .+++ ++.+++++.+.... ...| |..|.+++|+++++++. +++++|++ ++|+++
T Consensus 29 ~~~i~l~~nen----~~~~-~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~~------~~~~~I~v--t~Gs~e 92 (366)
T PRK01533 29 HSFVKLASNEN----PFGC-SPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKLH------VKMEQVLC--GSGLDE 92 (366)
T ss_pred CceEEeCCCCC----CCCC-CHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHhC------CCcceEEE--CCCHHH
Confidence 57899999987 3333 68888888776543 2446 67899999999999962 34889999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.++.. ..+.+||+|++++|+|+.|...+...|.+++.+++. ++.+|++.+++.+.+ +++++++++|||||
T Consensus 93 ~i~~~~~--~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~---~~~~v~i~~P~NPT 164 (366)
T PRK01533 93 VIQIISR--AVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDN---DTKIVWICNPNNPT 164 (366)
T ss_pred HHHHHHH--HhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCc---CCcEEEEeCCCCCC
Confidence 9998743 336799999999999999999999999999999872 456899999988864 56677779999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++|+++|++++ ++|+||+|.+|.+.+ +..+........+++|+++||||.||++|+|+||+++ +
T Consensus 165 G~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~---~ 237 (366)
T PRK01533 165 GTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAK---DFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG---H 237 (366)
T ss_pred CCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccc---cCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC---C
Confidence 99999999999999998876 577799999887532 1111122334557899999999999999999999844 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++++... . . ..+.+.++|.++..+|++.++ .++.++.++++++++.+.++ ..| +.+.++
T Consensus 238 ~~~~~~l~~~----~-~-~~~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~r~~~~~~l~-~~g----~~~~~~ 299 (366)
T PRK01533 238 EELIEKLNVV----R-L-PFNVSSLAQKAATIAFGDDEF-------IEEIVRVNTEGLRQYESFCK-ENE----IPFYQS 299 (366)
T ss_pred HHHHHHHHHh----c-C-CCCcCHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHHHHH-hCC----CccCCC
Confidence 7866665442 2 1 236788889999888887543 24556667777777888887 776 455666
Q ss_pred CcceeeecCC-CH-HHHHHhhhcCcEEEcCCC---eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 354 QIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 354 ~~~~~~~~~~-~~-~~~~~ll~~~gi~v~~~g---Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+ +.|+|+.+ +. ++...++ ++||.|++.. ||+++ +.++.+.++++|+++++.
T Consensus 300 ~-~nf~~~~~~~~~~~~~~l~-~~GI~Vr~~~~~iRis~~--~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 300 Q-TNFIFLPVENGGEIYEACA-HAGFIIRPFPNGVRITVG--TREQNEGVISVLQQHFEN 355 (366)
T ss_pred c-CcEEEEeCCCHHHHHHHHH-HCCcEEccCCCceEEeCC--CHHHHHHHHHHHHHHHHh
Confidence 4 67888876 33 3445555 5799998753 99985 579999999999998764
No 75
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=3e-40 Score=336.71 Aligned_cols=346 Identities=11% Similarity=0.079 Sum_probs=258.0
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-CceEEEecCCh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSG 111 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~gg 111 (410)
++++|+|+.|++ ..+ +|+.+++++.+.+... .+ ..|.+++++++++++.+.+|+..++ ++|++ ++|+
T Consensus 696 g~~vI~LsinE~----d~p-pPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIv--t~Gs 763 (1082)
T PLN02672 696 ESSLIHMDVDES----FLP-VPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVY--GDTS 763 (1082)
T ss_pred CCCEEEEeCCCC----CCC-CCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEE--eCCH
Confidence 468899999997 433 3789999988766432 12 2356788999999998888887754 57888 8888
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC-
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH- 190 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~- 190 (410)
++++..+ +...+.+||.|+++.|+|+.|...++..|++++.+|+.+++++.+|++.+++.+++. ....+++++|+
T Consensus 764 ~elL~ll--l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~--~~~~I~L~nPnh 839 (1082)
T PLN02672 764 LALFNKL--VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV--KKPWVYISGPTI 839 (1082)
T ss_pred HHHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC--CCCEEEEECcCC
Confidence 8888876 334467999999999999999999999999999999965568899999999988641 23345568886
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh---hc---CCcEEEEecccccccccCCCc
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA---TR---GMELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~---~~---~~~~i~~~S~sK~~~~~G~r~ 264 (410)
||||.+++.+++++|+++|++||++||+||+|.++.+.+.....+++.... .. ..++++++||||.++++|+|+
T Consensus 840 NPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRI 919 (1082)
T PLN02672 840 NPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEF 919 (1082)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHh
Confidence 999999999999999999999999999999999888753111111221111 11 137999999999999999999
Q ss_pred ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
||+ +++++++++.+..... . . ....+...++.++..++.+.. ..|.+++++.++.++++++++.+.|+ +.|
T Consensus 920 Gyl--Iap~~eLi~~l~~~~~-~-s-~~~~~~q~Aaaaalall~~~~--~~~~~~l~e~r~~Lk~rRd~L~e~L~-~~G- 990 (1082)
T PLN02672 920 GFL--ALNDSVLIDAFHSAPG-L-S-RPHSTLKYTIKKLLGLKNQKS--SDLLDGVAEQKKILKSRAERLKETLE-ACG- 990 (1082)
T ss_pred eeE--EeCCHHHHHHHHHhhh-h-c-CCCcHHHHHHHHHHHHHhccC--cHHHHHHHHHHHHHHHHHHHHHHHHH-HCC-
Confidence 998 4445556666654211 1 0 111112222222233332111 22567788999999999999999999 876
Q ss_pred CCCcccccCCcceeeecCC---------------------C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCccc
Q 015283 345 GKDWSFILRQIGMFSFTGL---------------------N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAK 394 (410)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~---------------------~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~ 394 (410)
+.+.+|++++|+|+.+ + .+++++++++.||.+.||. ||+++. ++++
T Consensus 991 ---i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~~e~ 1066 (1082)
T PLN02672 991 ---WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-EDSE 1066 (1082)
T ss_pred ---CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-CHHH
Confidence 5778899999999732 2 3457788887899999972 999987 8889
Q ss_pred HHHHHHHHHHHhh
Q 015283 395 CEYLADAIIDSYH 407 (410)
Q Consensus 395 i~~~~~~l~~~l~ 407 (410)
+++++++|++.++
T Consensus 1067 LeeALerL~kf~~ 1079 (1082)
T PLN02672 1067 FDRALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 76
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-39 Score=308.69 Aligned_cols=332 Identities=17% Similarity=0.190 Sum_probs=248.1
Q ss_pred CCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc
Q 015283 18 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 97 (410)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~ 97 (410)
..++.++++++.. ...++|+|+.|++ ..++ ++.+.+++.+.... ...|+ ..|.++||+++++++.
T Consensus 15 ~~~~~~~~~~~~~-~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~~------ 79 (357)
T PRK14809 15 GRGIEEVARELGL-DPDDLVKLSSNEN----PHGP-SPAAVEAIREAAER--VHSYP-KASHADLTAALADRWD------ 79 (357)
T ss_pred CCCHHHHHHHhCC-CccceeEecCCCC----CCCC-CHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHhC------
Confidence 3334444444433 2357999999987 3332 57788888776543 36785 5789999999999962
Q ss_pred ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283 98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
+++++|++ |+|+++++.++.. ..+.+||.|++++|+|+.|.......|.+++.+++..++++.+|.+.+.+...
T Consensus 80 ~~~~~I~i--t~G~~~al~~~~~--~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-- 153 (357)
T PRK14809 80 VSPEQVWL--ANGGDGALDYLAR--AMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD-- 153 (357)
T ss_pred CCcceEEE--CCCHHHHHHHHHH--HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc--
Confidence 35889999 9999999998743 33679999999999999998888888999999988544567778777766542
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
+++++++++||||||.++|.+++++|+++|++ +++||+||+|.+|.+. .. .. ......+++++++||||.|
T Consensus 154 --~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~---~~--~~-~~~~~~~~vi~~~SfSK~~ 224 (357)
T PRK14809 154 --GERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAER---PS--AV-ALVEERDDVAVLRTFSKAY 224 (357)
T ss_pred --CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCC---ch--hH-HHHhhCCCEEEEecchhHh
Confidence 34566678999999999999999999999975 7899999999998853 11 11 2234456899999999999
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
|+||+|+||+++ ++++++++.. .. ...+.+.+++.++...|.+.+ ++++.++.++++++.+.+.
T Consensus 225 ~~~GlRiG~~~~---~~~~~~~~~~----~~--~~~~~~~~~~~~a~~~l~~~~-------~~~~~~~~~~~~r~~l~~~ 288 (357)
T PRK14809 225 GLAGLRLGYAVV---PEEWADAYAR----VN--TPFAASELACRAGLAALDDDE-------HVERTVETARWAREYIREE 288 (357)
T ss_pred cCcchhheeeec---CHHHHHHHHH----hC--CCCCCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHH
Confidence 999999999854 7776555543 22 123466777888877777532 3456777888888888888
Q ss_pred hhhccCCCCCcccccCCcceeeecCC-C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhh
Q 015283 338 LSAKDKSGKDWSFILRQIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
|. ... .+.+|+|+|+.+ + .++... ++++||.+.||. ||+++ +.+++++++++|+++++
T Consensus 289 L~-~~~--------~~~~g~f~~~~~~~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 289 LD-APT--------WESAGNFVLAEVGDASAVAEA-AQERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred hc-Ccc--------CCCCCCEEEEECCCHHHHHHH-HHHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 87 432 145688989876 3 344555 456799999873 99985 46899999999999875
No 77
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.8e-40 Score=315.93 Aligned_cols=346 Identities=16% Similarity=0.095 Sum_probs=247.9
Q ss_pred cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 31 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 31 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
..++++|+|+.|.| + ..++..+.+.+++.+.+... ....|++..|.++||+++++++.+.+|..+++++|++
T Consensus 27 ~~~~~~i~l~~g~p-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~i- 102 (416)
T PRK09440 27 LRTPGAIMLGGGNP-A--HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL- 102 (416)
T ss_pred hcCCCceeccCCCC-C--ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE-
Confidence 33467899999987 1 12222356677776655331 2257999999999999999999877788888999999
Q ss_pred ecCChhhHHHHHHHHHHHhC-----CCCEEEE-cCCCCcchhhhhhhCC----CCccceeeecCC-CcccChhhHHHHHh
Q 015283 107 QGLSGTGSLRLAAALIERYF-----PGAKVLI-SSPTWGNHKNIFNDAR----VPWSEYRYYDPK-TVGLDFEGMIADIK 175 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~-----~gd~Vl~-~~p~y~~~~~~~~~~g----~~~~~v~~~~~~-~~~~d~~~l~~~i~ 175 (410)
|+|+++++.++..++ +. +||.|++ .+|+|+.|...+...+ .....+++.+++ .+.+|++.++ +.
T Consensus 103 -t~Ga~~al~~~~~~l--~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~ 177 (416)
T PRK09440 103 -TNGSQSAFFYLFNLF--AGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID 177 (416)
T ss_pred -ccChHHHHHHHHHHH--hccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC
Confidence 999999999985444 42 5899999 6999999987554333 222223332111 4678988887 22
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283 176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 255 (410)
Q Consensus 176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 255 (410)
+++.++++++||||||.++|.+++++|+++|++|+++||+||+|..+... ....... ....+++|+++||||
T Consensus 178 ---~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~---~~~~~~~--~~~~~~vI~~~SfSK 249 (416)
T PRK09440 178 ---EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG---IIFSEAT--PLWNPNIILCMSLSK 249 (416)
T ss_pred ---CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC---cchhhcC--ccccCCeEEEecccc
Confidence 35678888999999999999999999999999999999999999754321 0000100 011468999999999
Q ss_pred cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH-HHHHHHHHHHHH
Q 015283 256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM-MAGRIKNVRQKL 334 (410)
Q Consensus 256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~l 334 (410)
. ++||+|+||+++ ++++++++..... ....+++.++|.++..+|.++++. ++..+ .++.++++++.+
T Consensus 250 ~-~~pGlRiG~~i~---~~~l~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~~~~----~~~~~~~~~~~~~r~~~~ 317 (416)
T PRK09440 250 L-GLPGVRCGIVIA---DEEIIEALSNMNG----IISLAPGRLGPAIAAEMIESGDLL----RLSETVIRPFYRQKVQLA 317 (416)
T ss_pred c-CCCcceEEEEeC---CHHHHHHHHHHHH----HhccCCCcHHHHHHHHHhccchHH----HHHHHHHHHHHHHHHHHH
Confidence 6 899999999854 7786666554332 223367888999999999887653 33333 567777788877
Q ss_pred HHHhhhcc-CCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC---------------C--eEEecCCC
Q 015283 335 FDSLSAKD-KSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD---------------G--RISLAGLS 391 (410)
Q Consensus 335 ~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~---------------g--Ris~~~~~ 391 (410)
.+.|. +. +. ..+.+..|++|+|+|+.+ +...+.+.++++||.+.|| + |||++. +
T Consensus 318 ~~~L~-~~l~~-~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~ 394 (416)
T PRK09440 318 IALLR-RYLPD-EPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-D 394 (416)
T ss_pred HHHHH-Hhccc-CCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC-C
Confidence 77776 43 10 113556788999999854 2333333445679999873 2 899987 8
Q ss_pred cccHHHHHHHHHHHhhh
Q 015283 392 LAKCEYLADAIIDSYHN 408 (410)
Q Consensus 392 ~~~i~~~~~~l~~~l~~ 408 (410)
++++++++++|++++++
T Consensus 395 ~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 395 DEEIEKGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999999865
No 78
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=289.90 Aligned_cols=316 Identities=15% Similarity=0.206 Sum_probs=262.9
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCC--CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-h
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D 147 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~--~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~ 147 (410)
..|.+-.|.+.+|+++|+++....+ ...+|+++++ ++|+|+++++++.++ ..|||..++|.|.|+++...++ +
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l~fcL--adpgdafLvPtPyY~gfdrdl~~r 190 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETLMFCL--ADPGDAFLVPTPYYPGFDRDLRWR 190 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHHHHHh--cCCCceeeecCCCCCcccccceec
Confidence 5577788999999999999854433 4678899988 999999999985444 5599999999999999987777 7
Q ss_pred CCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC
Q 015283 148 ARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 224 (410)
Q Consensus 148 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 224 (410)
.|.++++|.+...++++++.+.+|+++++. ..+.+.+++.||+||.|..++++++..++++|.++++.+|+||+|++
T Consensus 191 Tgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~ 270 (471)
T KOG0256|consen 191 TGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAG 270 (471)
T ss_pred cCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcc
Confidence 899999999988899999999999888663 45677888899999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHhHHHhh----cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHH
Q 015283 225 FASGSLDNDASSVRLFAT----RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300 (410)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (410)
.+|+. .+..++..... ..+.+.+++|+||.||+||+|+|.+ .+.++++.... .++. .+...+...|
T Consensus 271 sVF~~--~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGvi--YS~ne~VvsaA----~kms--sf~~vSs~tQ 340 (471)
T KOG0256|consen 271 SVFDK--SEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVI--YSNNEDVVSAA----TKMS--SFGLVSSQTQ 340 (471)
T ss_pred cccCc--cCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEE--EecChHHHHHH----HHHh--hccCCcHHHH
Confidence 98864 24444444332 3458999999999999999999998 56677744433 3222 3556888899
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----------CHHHHH
Q 015283 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----------NKAQSD 369 (410)
Q Consensus 301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 369 (410)
..++.+|+|..+. ++++++.+++++.+.+++.++|+ ++| +.+.+.++|+|.|+++ ..++.+
T Consensus 341 ~~la~LLSD~~f~---~~yl~en~~Rl~~rh~~~~~gLk-~lg----I~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~ 412 (471)
T KOG0256|consen 341 YLLASLLSDEEFT---REYLRENNKRLRIRHRYIVEGLK-ALG----IPCLKSNAGLFCWVDLRKLLTSLTFEGELELWE 412 (471)
T ss_pred HHHHHHhchHHHH---HHHHHHHHHHHHHHHHHHHhhHH-hcC----CceeecCCeeEEEEEhHHhcCcCChHHHHHHHH
Confidence 9999999998775 45578999999999999999999 999 5889999999999975 124578
Q ss_pred HhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 370 NMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 370 ~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+++.+.++.+.||. |++|+++.++.++-+++||++.+.+
T Consensus 413 ~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 413 RILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred HHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 88887799999983 9999997777777799999998753
No 79
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-39 Score=308.79 Aligned_cols=329 Identities=15% Similarity=0.166 Sum_probs=250.6
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
..++|+.|++ ..+ .++.+.+++.+.+.. .....| |..|.+++|+++++++.+.++..+++++|++ |+|++
T Consensus 27 ~~i~l~~~~~----~~~-~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~ 98 (368)
T PRK03317 27 VPVRLNTNEN----PYP-PSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSN 98 (368)
T ss_pred ceeEecCCCC----CCC-CCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHH
Confidence 4589999987 333 368889888877532 123678 4568999999999999888788888999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++..+.. ..+.+||.|+++.|+|+.|...++..|.+++.++. .+++++|++.+++.+.+ .+++++++++|+||
T Consensus 99 ~~l~~~~~--~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NP 172 (368)
T PRK03317 99 EILQQLLQ--AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAE--HRPDVVFLTSPNNP 172 (368)
T ss_pred HHHHHHHH--HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCC
Confidence 99999843 33679999999999999999999989988888776 45678999999998875 24456667899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++| +++||+||+|.+|.+.+ .. +.....+..+++++++||||.||++|+|+||++.
T Consensus 173 tG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~---~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~--- 242 (368)
T PRK03317 173 TGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSG---TP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA--- 242 (368)
T ss_pred CCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccC---Cc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhC---
Confidence 99999999999997777 68999999999987532 11 2122333445899999999999999999999744
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++.+.. ... ..+.+.++|.++...|++.+ ...+.+++++++++.+.+.|+ +.| +.+..
T Consensus 243 ~~~~~~~l~~----~~~--~~~~s~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~ 304 (368)
T PRK03317 243 APAVVDALRL----VRL--PYHLSAVTQAAARAALRHAD-------ELLASVAALRAERDRVVAWLR-ELG----LRVAP 304 (368)
T ss_pred CHHHHHHHHh----cCC--CCCCCHHHHHHHHHHhhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CEeCC
Confidence 7786555443 221 22466778888777776532 123444567788888889998 776 46667
Q ss_pred CCcceeeecCC-CHH-HHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 353 RQIGMFSFTGL-NKA-QSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 353 ~~~~~~~~~~~-~~~-~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+.++++.|... +.. +.+.++ ++||.+.+.+ ||+++ +.++++.+++.|++++..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 305 SDANFVLFGRFADRHAVWQGLL-DRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEVLAT 364 (368)
T ss_pred CCCcEEEEeccCCHHHHHHHHH-HCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 78888888654 333 344554 5799998764 99985 568899999999998754
No 80
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.4e-39 Score=304.22 Aligned_cols=323 Identities=17% Similarity=0.168 Sum_probs=245.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+.+++|+.|.+ ..+ .++.+.+++.+.+.. ...|+ ..+.+++|+++++++. +++++|++ |+|+++
T Consensus 19 ~~~~~l~~~~~----~~~-~p~~~~~a~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~~------~~~~~i~i--t~Ga~~ 82 (354)
T PRK06358 19 NMILDFSANIN----PLG-VPESLKQAITENLDK--LVEYP-DPDYLELRKRIASFEQ------LDLENVIL--GNGATE 82 (354)
T ss_pred cceEEecCCCC----CCC-CCHHHHHHHHHHHHh--hhcCC-CccHHHHHHHHHHHhC------CChhhEEE--CCCHHH
Confidence 45799999886 222 268888888876543 36685 4578999999999972 35899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++..+.. .+.+ ++|++++|+|+.|...++..|++++.+++.+++++.+| +++++.+.. +++++++++|||||
T Consensus 83 ~l~~~~~---~~~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~---~~~~v~~~~P~NPt 154 (354)
T PRK06358 83 LIFNIVK---VTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE---EIDLVFLCNPNNPT 154 (354)
T ss_pred HHHHHHH---HhCC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc---CCCEEEEeCCCCCC
Confidence 9998743 2434 78999999999999999999999999998545567888 666666643 46666678999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++|+++|++|+++||+||+|.+|.+.+ ...+........+++++++||||.||++|+|+||+ ++++
T Consensus 155 G~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~---~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~l--v~~~ 229 (354)
T PRK06358 155 GQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN---ETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYG--LTSN 229 (354)
T ss_pred CCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc---cchhHHHhccCCCCEEEEEechhhccCcchhheee--ecCC
Confidence 999999999999999999999999999999998642 11222223344569999999999999999999998 4445
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+.+++.+.. ... . .+.+.++|.++..+|++.+ ++++.++.++++++++.+.|+ +.+. +.+..+
T Consensus 230 ~~~~~~~~~----~~~-~-~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~~ 292 (354)
T PRK06358 230 KNLAEKLLQ----MRE-P-WSINTFADLAGQTLLDDKE-------YIKKTIQWIKEEKDFLYNGLS-EFKG---IKVYKP 292 (354)
T ss_pred HHHHHHHHH----hCC-C-CcchHHHHHHHHHHhccHH-------HHHHHHHHHHHHHHHHHHHHh-cCCC---cEEcCC
Confidence 665555433 222 2 2456777888888886542 246777888999999999998 7631 455666
Q ss_pred CcceeeecCC--CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHh
Q 015283 354 QIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 354 ~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
. |.|+|+.+ ..++++++++ +||.+.|+. ||+++ +.++.+++++.|++++
T Consensus 293 ~-g~f~~~~~~~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 293 S-VNFIFFKLEKPIDLRKELLK-KGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred c-ceEEEEEcCchHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 5 45888876 3445666665 699998862 89985 5789999999998875
No 81
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.2e-39 Score=302.58 Aligned_cols=338 Identities=14% Similarity=0.141 Sum_probs=250.2
Q ss_pred CCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCC
Q 015283 17 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 96 (410)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~ 96 (410)
++.++...++++... ..++++|+.|++ ..+ +|+.+++++.+.+.. ...|+ ..+.+++|+++++++.
T Consensus 4 ~~~~~~~~~~~~~~~-~~~~i~l~~~~~----~~~-~p~~~~~a~~~~~~~--~~~y~-~~~~~~lr~~ia~~~~----- 69 (356)
T PRK08056 4 HGGNIREAATVLGIS-PDQLLDFSANIN----PLG-MPVSLKRAIIDNLDC--AERYP-DVEYRHLHQALARHHQ----- 69 (356)
T ss_pred CCccHHHHHHHhCCC-hhhEEEeccccC----CCC-CCHHHHHHHHHHHHh--cccCc-CccHHHHHHHHHHHhC-----
Confidence 566666666555432 346899999987 333 368888888776643 25675 4578999999999962
Q ss_pred cccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283 97 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 97 ~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
+++++|++ |+|+++++..+.. .+.+|+ +++++|+|..|...++..|.+++.+++.+++++.+| +.+++.+.+
T Consensus 70 -~~~~~i~i--t~Ga~~~l~~~~~---~l~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~ 141 (356)
T PRK08056 70 -VPASWILA--GNGETESIFAVVS---GLKPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTP 141 (356)
T ss_pred -cChhhEEE--CCCHHHHHHHHHH---HhCCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccC
Confidence 34789999 9999999988743 346775 788899999999999999999999998555566666 455555543
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283 177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 256 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 256 (410)
+++++++++||||||.+++.+++++|+++|++++++||+||+|.+|.+.+ .. .+ ......+++++++||||.
T Consensus 142 ---~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~--~~-~~~~~~~~~i~~~S~SK~ 213 (356)
T PRK08056 142 ---DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE--TG--FI-PQLADNPHLWVLRSLTKF 213 (356)
T ss_pred ---CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc--hH--HH-HHhccCCCEEEEEechhh
Confidence 56677789999999999999999999999999999999999999987532 11 11 122345689999999999
Q ss_pred ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 257 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 257 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
||++|+|+||+ ++++++.++++.. .. ...+++.+++.++..++.+..+ .++.++.++++++++.+
T Consensus 214 ~~~~G~RiG~~--v~~~~~~~~~l~~----~~--~~~~~~~~~~~~a~~~l~~~~~-------~~~~~~~~~~~r~~l~~ 278 (356)
T PRK08056 214 YAIPGLRLGYL--VNSDDAAVARMRR----QQ--MPWSINAFAALAGEVILQDRAY-------QQATWQWLAEEGARFYQ 278 (356)
T ss_pred ccCcchhheee--ecCCHHHHHHHHH----hC--CCCchhHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHH
Confidence 99999999998 4445565455432 21 2234566777777777765433 35778889999999999
Q ss_pred HhhhccCCCCCcccccCCcceeeecCC--C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHH
Q 015283 337 SLSAKDKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAII 403 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~ 403 (410)
.|+ +++. +.+.++ .++|+|+.+ + .++++.+++ +||.+.++. ||+++ +.++.+.+++.|+
T Consensus 279 ~L~-~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~ 350 (356)
T PRK08056 279 ALC-ALPL---LTVWPG-RANYLFLRCERPDIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALR 350 (356)
T ss_pred HHh-cCCC---cEEcCC-CCcEEEEEcCCChHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHH
Confidence 998 7731 344444 578888865 2 345666665 699998751 99985 5788899999998
Q ss_pred HHhh
Q 015283 404 DSYH 407 (410)
Q Consensus 404 ~~l~ 407 (410)
++++
T Consensus 351 ~~~~ 354 (356)
T PRK08056 351 NVLT 354 (356)
T ss_pred HHHc
Confidence 8764
No 82
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-39 Score=305.01 Aligned_cols=319 Identities=15% Similarity=0.160 Sum_probs=246.2
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
.+++|+.|.+ ...+ ++.+.+++.+.+.. ..|.|..|.+++|+++++++. +++++|++ |+|++++
T Consensus 30 ~~i~l~~n~~----~~~~-~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~~------~~~~~i~~--t~G~~~~ 93 (359)
T PRK03158 30 KIVKLASNEN----PYGP-SPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHLG------VDEEQLLF--GAGLDEV 93 (359)
T ss_pred ceEEecCCCC----CCCC-CHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHhC------CCHHHEEE--CCCHHHH
Confidence 6899999987 2222 67888888776643 345577899999999999973 23789999 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283 115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 194 (410)
Q Consensus 115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG 194 (410)
+..+.. ..+.+||.|++++|+|+.|...+...|.++..+++. ++.+|++.+++.+.+ +++++++++||||||
T Consensus 94 l~~~~~--~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~---~~~~v~i~~p~NPtG 165 (359)
T PRK03158 94 IQMISR--ALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDE---QTKIVWICNPNNPTG 165 (359)
T ss_pred HHHHHH--HHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCC---CCCEEEEeCCCCCCC
Confidence 988743 336799999999999999999999999999999983 467899999887764 566677799999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
.+++.+++.++++.|+ +|++||+||+|.++.+++.... .+ ...+..+++++++||||.+|++|+|+||+++ ++
T Consensus 166 ~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~--~~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~~ 238 (359)
T PRK03158 166 TYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPD--TL-PLLEKYENLIVLRTFSKAYGLAALRVGYGIA---SE 238 (359)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCccccc--HH-HHHHhcCCEEEEEechHhhcCcchhhehhcC---CH
Confidence 9999999999988875 6999999999999876421111 11 2234556899999999999999999999754 77
Q ss_pred hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283 275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 354 (410)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 354 (410)
++++++... .. . .+++.++|.++..+|.+.++ .++.++.++++++.+.+.|+ +.+ +.+. +.
T Consensus 239 ~~~~~~~~~----~~-~-~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~l~-~~~----~~~~-~~ 299 (359)
T PRK03158 239 ELIEKLNIA----RP-P-FNTTRIAQYAAIAALEDQAF-------LKECVEKNAEGLEQYYAFCK-EYG----LFYY-PS 299 (359)
T ss_pred HHHHHHHHh----cC-C-CCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CeeC-CC
Confidence 866665432 22 2 35788888999888876533 34566677888888888888 775 3444 44
Q ss_pred cceeeecCC--C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHh
Q 015283 355 IGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 355 ~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
.|+|+|+.+ + .++++.+++ +||.+.||. ||+++ +.+++++++++|++++
T Consensus 300 ~g~~i~~~~~~~~~~~~~~l~~-~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 300 QTNFIFVDTGRDANELFEALLK-KGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKELL 359 (359)
T ss_pred cCcEEEEECCCCHHHHHHHHHH-CCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHhC
Confidence 578899865 3 345666665 699999962 99986 5889999999998863
No 83
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-39 Score=303.21 Aligned_cols=316 Identities=17% Similarity=0.176 Sum_probs=239.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|+|+.|++ ..++ ++.+.+++.+.+.... ..|+ ..|.+++|+++++++. +++++|++ |+|+++
T Consensus 24 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~~~-~~y~-~~~~~~lr~aia~~~~------~~~~~I~i--t~G~~~ 88 (353)
T PRK05387 24 AKLIKLNTNEN----PYPP-SPKVLEAIRAALGDDL-RLYP-DPNADALRQAIAAYYG------LDPEQVFV--GNGSDE 88 (353)
T ss_pred cceeeccCCCC----CCCC-CHHHHHHHHHHhhhhh-hcCC-CCcHHHHHHHHHHHhC------CCHHHEEE--cCCHHH
Confidence 46899999987 3332 6888988887665433 6785 4467999999999973 34789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.+++. ..+.+||+|++++|+|+.|...++..|++++.+++ .+++.+|++.+++ .+.++++++|||||
T Consensus 89 al~~~~~--~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~-------~~~~v~~~~P~NPt 157 (353)
T PRK05387 89 VLAHAFL--AFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPL--DDDFSIDVEDYLR-------PNGGIIFPNPNAPT 157 (353)
T ss_pred HHHHHHH--HhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeec--CCCCCCCHHHHHh-------cCCEEEEeCCCCCC
Confidence 9999843 34779999999999999999999999999999988 3457889998863 23456779999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.++|.+++++|+++++ ++++|+||+|.+|... ... .+....+++++++||||.+|++|+|+||++. +
T Consensus 158 G~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~~~---~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~---~ 225 (353)
T PRK05387 158 GIALPLAEIERILAANP--DSVVVIDEAYVDFGGE----SAI---PLIDRYPNLLVVQTFSKSRSLAGLRVGFAIG---H 225 (353)
T ss_pred CCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----chH---HHHhhCCCEEEEEehhHhhcchhhhceeeec---C
Confidence 99999999999988654 8999999999876421 111 2234456899999999999999999999854 7
Q ss_pred chhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 274 SDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
+++++++... .... ..+.+..+|.++...+.+.++ .++.+++++++++.+.+.|+ +.| +.+.
T Consensus 226 ~~~~~~l~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g----~~~~- 288 (353)
T PRK05387 226 PELIEALNRV----KNSFNSYPLDRLAQAGAIAAIEDEAY-------FEETRAKVIATRERLVEELE-ALG----FEVL- 288 (353)
T ss_pred HHHHHHHHHh----hccCCCCCcCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CeEC-
Confidence 7766655442 2221 124567788888777775432 35677888999999999998 776 3443
Q ss_pred CCcceeeecCC---CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 353 RQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 353 ~~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
+.+++|+|+.+ +. ++.+.+. ++||.+.+. + ||+++ +.+++++++++|++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 289 PSKANFVFARHPSHDAAELAAKLR-ERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred CCcCcEEEEECCCCCHHHHHHHHH-HCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 45677888754 33 4455654 569998543 1 99986 56899999999999875
No 84
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=295.90 Aligned_cols=319 Identities=18% Similarity=0.220 Sum_probs=253.2
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
++++|+++++ .+++ |+.+++++.+.... .+.| |.....++++++++++.. .++++|++ .+|+++.
T Consensus 23 ~~i~LssNen----P~gp-~~~~~~~~~~~~~~--~~rY-Pd~~~~~l~~a~a~~~~~-----~~~~~V~~--gnGsde~ 87 (356)
T COG0079 23 GIIKLSSNEN----PYGP-PPKVIEAIRAALDK--LNRY-PDPDYRELRAALAEYYGV-----VDPENVLV--GNGSDEL 87 (356)
T ss_pred cceeecCCCC----CCCC-CHHHHHHHHHHHHh--hccC-CCCcHHHHHHHHHHHhCC-----CCcceEEE--cCChHHH
Confidence 6899999886 3332 58888888777652 3778 445889999999999653 23789988 8999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283 115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 194 (410)
Q Consensus 115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG 194 (410)
+..+.+. .+.+||+|+++.|+|..|...++..|++++.++.. + |.+|++.+.+.+.+ ++.++++||||||||
T Consensus 88 i~~l~~~--~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~--~-~~~d~~~~~~~~~~---~~~lv~i~nPNNPTG 159 (356)
T COG0079 88 IELLVRA--FVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLK--E-FRLDLDAILAAIRD---KTKLVFLCNPNNPTG 159 (356)
T ss_pred HHHHHHH--hhcCCCEEEEcCCChHHHHHHHHhcCCeEEEeccc--c-cccCHHHHHHhhhc---CCCEEEEeCCCCCCC
Confidence 9997433 36699999999999999999999999999999984 3 88999999998885 677788899999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
..++.++++++++.+.+ +.+||+||||.+|... +...+....+++++++||||+||++|+|+||++. ++
T Consensus 160 ~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~-------~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia---~~ 228 (356)
T COG0079 160 TLLPREELRALLEALPE-GGLVVIDEAYIEFSPE-------SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA---NP 228 (356)
T ss_pred CCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc-------hhhhhccCCCCEEEEEecHHhhhcchhceeeccC---CH
Confidence 99999999999999998 9999999999999952 2223333566899999999999999999999654 88
Q ss_pred hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283 275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 354 (410)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 354 (410)
++++.+.+.. . .| +.+.+++.++...|.+.+ ++++.++++.+.++++.+.|+ .+|+ ..+.+++
T Consensus 229 ~~i~~l~~vr----~-p~-~v~~~a~~aa~aal~~~~-------~~~~~~~~~~~~r~rl~~~l~-~~~~---~~v~pS~ 291 (356)
T COG0079 229 ELIAALNKVR----P-PF-NVSSPALAAAIAALRDAD-------YLEESVERIREERERLYAALK-ALGL---FGVFPSQ 291 (356)
T ss_pred HHHHHHHHhc----C-CC-CCCHHHHHHHHHHcccHH-------HHHHHHHHHHHHHHHHHHHHH-hCCC---CeecCCC
Confidence 8666655532 2 23 567777888888888763 357888999999999999999 8872 1244444
Q ss_pred cceeeecCCC---H-HHHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 355 IGMFSFTGLN---K-AQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 355 ~~~~~~~~~~---~-~~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+.|+++... . .+.+.|++ +||.++..+ ||+++ ++++.++++++|++++..
T Consensus 292 -aNFvlv~~~~~~~~~l~~~L~~-~giivR~~~~~~~~~~~lRitvg--t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 292 -ANFVLVRVPDAEAAALAEALLK-KGILVRDCSSVGLLPGYLRITVG--TPEENDRLLAALREVLKG 354 (356)
T ss_pred -CcEEEEECCCccHHHHHHHHHH-CCEEEEeCCCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 788888763 2 34566665 599997751 99996 467779999999998765
No 85
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-38 Score=300.90 Aligned_cols=333 Identities=17% Similarity=0.199 Sum_probs=250.1
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
+.+.|+|+.|.+ ..+ .++.+.+++.+.+.......|.+..|.+++|+++++++. +++++|++ ++|++
T Consensus 27 ~~~~i~l~~~~~----~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~------~~~~~v~~--~~g~t 93 (380)
T PRK06225 27 DKEMIWMGQNTN----HLG-PHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDDEALI--TAGAT 93 (380)
T ss_pred cCCeEEccCCCC----CCC-CCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcC------CCCCcEEE--eCCHH
Confidence 357899998876 332 368899998888765444678888899999999999963 23678999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
+++..++. ..+.+||+|++++|+|..+...++..|++++.+++.+ ++++.+|++.+++.+.+ +++++++++|+|
T Consensus 94 ~al~~~~~--~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~N 168 (380)
T PRK06225 94 ESLYLVMR--AFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE---NTRLIYLIDPLN 168 (380)
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC---CceEEEEeCCCC
Confidence 99999843 3366999999999999999888899999999998743 33578999999988865 566777789999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.++|.+++++|+++|+++|+++|+||+|.+|..+. . ..... ..++++++.||||.+|++|+|+||+++
T Consensus 169 ptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~--~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~-- 239 (380)
T PRK06225 169 PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH---T--LAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVA-- 239 (380)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC---C--chhhc--CCCCEEEEeechhhcCCccceeEEEec--
Confidence 99999999999999999999999999999998776431 1 11111 235789999999999999999999854
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++++.... .. ..+.+.+++.++...|... .++.++.++.++++++.+.+.|+ ++.. ..+. .
T Consensus 240 -~~~l~~~~~~~~----~~-~~~~~~~~~~~a~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~-~~~~-~ 304 (380)
T PRK06225 240 -TPDLIEVVKSIV----IN-DLGTNVIAQEAAIAGLKVK------DEWIDRIRRTTFKNQKLIKEAVD-EIEG-VFLP-V 304 (380)
T ss_pred -CHHHHHHHHHHH----hc-ccCCCHHHHHHHHHHHhcc------hHHHHHHHHHHHHHHHHHHHHHH-hCcC-Cccc-c
Confidence 777666654432 11 2345667777776666532 12235666777778888888887 6421 0112 2
Q ss_pred cCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC-------C----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 352 LRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 352 ~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~-------g----Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+..+.|.|+.+ +. ++..++. ++||.+.|| + |++++. +++++++++++|+++++++
T Consensus 305 ~~~~g~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 305 YPSHGNMMVIDISEAGIDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETL 377 (380)
T ss_pred CCCCCeEEEEEcccccCCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 345566777643 33 3455565 579999885 2 999986 8899999999999998764
No 86
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-38 Score=301.69 Aligned_cols=325 Identities=17% Similarity=0.206 Sum_probs=245.4
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
.+.+|+|+.|.+ ... .++.+.+++.+.... ...|++..| .++|+++++++. +++++|++ |+|++
T Consensus 35 ~~~~i~l~~~~~----~~~-~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~~------~~~~~i~~--t~G~~ 98 (371)
T PRK05166 35 VPRIAKLGSNEN----PLG-PSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAARTG------VPADRIIL--GNGSE 98 (371)
T ss_pred CcceEEcCCCCC----CCC-CCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHH
Confidence 347899999987 222 257888887765432 367987778 499999999962 23789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++..+.. ..+.+||.|+++.|+|+.+...++..|.+++.+++. .++++|++++++.+++ +++++++++||||
T Consensus 99 ~~l~~~~~--~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP 171 (371)
T PRK05166 99 DLIAVICR--AVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVT--PDLGFDLDALCAAVAR---APRMLMFSNPSNP 171 (371)
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHhhhc---CCCEEEEeCCCCC
Confidence 99988743 336799999999999999999999999999999883 4578899999998875 4566777999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++|++ +++||+||+|.+|.+++. ....+..+....+++++++||||.||++|+|+||+ +++
T Consensus 172 tG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~--i~~ 246 (371)
T PRK05166 172 VGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD--YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYG--LVS 246 (371)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC--cccHHHHHhhcCCCEEEEeechHhhhcchhheeee--ecC
Confidence 9999999999999999874 889999999999885421 11112122223458999999999999999999997 445
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++.+.+.. .. ...+++.++|.++...+.+.+ ++++.++.++++++++.+.|+ +.| +.+ .
T Consensus 247 ~~~l~~~~~~----~~--~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g----~~~-~ 307 (371)
T PRK05166 247 DPELVGLLDR----VR--TPFNVNGAAQAAALAALDDEE-------HLAKGVALALAERERLKKELA-EMG----YRI-A 307 (371)
T ss_pred CHHHHHHHHH----hc--cCCCCCHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHH-HCc----Cee-C
Confidence 6775555433 22 123467778877777776543 245667888889999999998 776 343 3
Q ss_pred CCcceeeecCC--C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhh
Q 015283 353 RQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 353 ~~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
+.+|+|+|+.+ + .++.+.+++ +||.+.|+. ||+++. .++.+++.+.|+.++.
T Consensus 308 p~~g~fl~~~~~~~~~~l~~~l~~-~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 308 PSRANFLFFDARRPASAVAEALLR-QGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKVLE 370 (371)
T ss_pred CCcCCEEEEeCCCCHHHHHHHHHH-CCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHhh
Confidence 55688999865 2 345666665 599999862 999974 6678888888877653
No 87
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-38 Score=300.31 Aligned_cols=320 Identities=18% Similarity=0.163 Sum_probs=243.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+++++|+.|++ ..+ +++.+++++.+.+.......|++ .|.+++|+++++++... ..++|++ ++|+++
T Consensus 26 ~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~-----~~~~I~~--t~G~~~ 92 (356)
T PRK04870 26 TGMVKLDAMEN----PYR-LPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGVP-----AGADVLL--GNGSDE 92 (356)
T ss_pred CCceeCcCCCC----CCC-CCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCcC-----CCCcEEE--cCCHHH
Confidence 57899999987 333 37899999988775433367865 68899999999997422 1257888 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++..+.. ..+.+||+|++++|+|..|...++..|++++.+++. +++.+|++.+++.+.. .+++++++++|||||
T Consensus 93 ~i~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~p~NPt 166 (356)
T PRK04870 93 LIQLLAL--ACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAE--HRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHHHH--HhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc--CCCCEEEEcCCCCCC
Confidence 9988743 336799999999999999999999999999999983 4578999999998864 256677778999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++|+++| +.++|+||+|.+|.... . . ......+++++++|||| ++++|+|+||+++ +
T Consensus 167 G~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~----~--~-~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~---~ 232 (356)
T PRK04870 167 GNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS----W--L-PRLARFPNLLVMRTVSK-LGLAGLRLGYLAG---H 232 (356)
T ss_pred CCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc----h--H-HHHhhCCCEEEEecchh-hhhHHHhhhhhhC---C
Confidence 9999999999999998 67899999999876421 1 1 12234468999999999 8999999999854 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++++.. .. ..+ +.+.++|.++..++++.+ .+++.+++++++++.+.+.|+ +++ + +.+. +
T Consensus 233 ~~~i~~~~~----~~-~~~-~~~~~~q~~a~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~--~-~~~~-~ 294 (356)
T PRK04870 233 PAWIAELDK----VR-PPY-NVNVLTQATALFALEHVD-------VLDAQAAQLRAERTRLAAALA-ALP--G-VTVF-P 294 (356)
T ss_pred HHHHHHHHH----cc-CCC-cCCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-hCC--C-cEEC-C
Confidence 775555443 22 122 466677777777776532 245777888899999999998 763 1 3443 4
Q ss_pred CcceeeecCC-CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHh
Q 015283 354 QIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 354 ~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
.+++|+|+.+ +.+.+.+.++++||.+.++. ||+++ +.+++++++++|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 295 SAANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL 356 (356)
T ss_pred CCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence 5677888876 34445555567899998751 99986 5788999999998764
No 88
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-38 Score=298.34 Aligned_cols=320 Identities=13% Similarity=0.118 Sum_probs=243.7
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
..++|+.|++ +.++ ++.+.+++.+.... ...|++. +.++||+++++++. +++++|++ ++|++++
T Consensus 33 ~~~~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~~------~~~~~I~i--t~G~~~~ 96 (369)
T PRK08153 33 FRARIGANES----GFGP-SPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHHG------VAPENIMV--GEGIDGL 96 (369)
T ss_pred ceeEecCCCC----CCCC-CHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHhC------CCHHHEEE--cCCHHHH
Confidence 4579999987 4433 67888888776532 2568654 58899999999962 34789999 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283 115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 194 (410)
Q Consensus 115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG 194 (410)
+..+..+ .+.+||.|++++|+|+.+...++..|.+++.+|+. +...|++.+++.+.+ .++.++++++|+||||
T Consensus 97 l~~~~~~--~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~---~~~~~~~~l~~~~~~--~~~~~i~l~~P~NPtG 169 (369)
T PRK08153 97 LGLIVRL--YVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYR---DDREDLDALLDAARR--ENAPLVYLANPDNPMG 169 (369)
T ss_pred HHHHHHH--hcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCC---CCCCCHHHHHHHhcc--cCCcEEEEeCCCCCCC
Confidence 9987433 36799999999999999998888899999999873 224788888776653 3566777799999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
.++|.+++++++++|+ ++++||+||+|.++.+++ .... +....+++++++||||.||++|+|+||+++ ++
T Consensus 170 ~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~---~~~~---~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~---~~ 239 (369)
T PRK08153 170 SWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG---AAPP---IDTDDPNVIRMRTFSKAYGLAGARVGYAIG---AP 239 (369)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc---cchh---hhhcCCCEEEEecchHhccCcchheeeeec---CH
Confidence 9999999999999987 499999999999988542 1122 222346899999999999999999999854 77
Q ss_pred hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283 275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 354 (410)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 354 (410)
++++.+... .. . .+.+..+|.++..+|+++++ +++.++.++++++.+.+.|+ +.| +... +.
T Consensus 240 ~~~~~l~~~----~~-~-~~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~~~~~L~-~~g----~~~~-p~ 300 (369)
T PRK08153 240 GTIKAFDKV----RN-H-FGMNRIAQAAALAALKDQAY-------LAEVVGKIAAARDRIAAIAR-ANG----LTPL-PS 300 (369)
T ss_pred HHHHHHHHh----hc-C-CCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CccC-CC
Confidence 766555432 22 2 34677888888888876533 35678888889999999998 776 3433 56
Q ss_pred cceeeecCCC------HHHHHHhhhcCcEEEc-CC-----C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 355 IGMFSFTGLN------KAQSDNMTNKWHVYMT-KD-----G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 355 ~~~~~~~~~~------~~~~~~ll~~~gi~v~-~~-----g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+++|+|+.+. ..+.+++++ +||.+. |+ + ||+++ ++++++.+++.|++++..+
T Consensus 301 ~~~f~~~~~~~~~~~a~~l~~~l~~-~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 301 ATNFVAIDCGRDGAFARAVLDGLIA-RDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEALEAA 366 (369)
T ss_pred cCcEEEEECCCCcccHHHHHHHHHH-CCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 7888887552 233455554 699995 43 2 99986 6899999999999988653
No 89
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=3e-38 Score=299.06 Aligned_cols=317 Identities=18% Similarity=0.166 Sum_probs=241.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
++.++|+.|++ +.+ +++.+.+++.+.... ...|++. +.+++|+++++++. +++++|++ |+|+++
T Consensus 43 ~~~i~l~~~~~----~~~-~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~~------v~~e~I~i--t~Gs~~ 106 (370)
T PRK09105 43 EGAVFLNANEC----PLG-PSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQEG------LPADHVMA--YAGSSE 106 (370)
T ss_pred CCcEEecCCCC----CCC-CCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHhC------cChhhEEE--cCChHH
Confidence 46799999986 333 368888888776543 2458544 48999999999852 34889999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++..+. ...+.+||+|++++|+|+.|...++..|.+++.+++. .++.+|++.+++. . +++.+++++||||||
T Consensus 107 ai~~~~--~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~-~---~~~~~v~l~nP~NPT 178 (370)
T PRK09105 107 PLNYAV--LAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLR--ADGAHDVKAMLAA-D---PNAGLIYICNPNNPT 178 (370)
T ss_pred HHHHHH--HHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHhc-C---CCCCEEEEeCCCCCC
Confidence 999984 3336799999999999999999999999999999883 3577899988765 2 246677779999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.++++++++.|+ +++++|+||+|.+|... . +...+.+..+++++++||||.||++|+|+||+++ +
T Consensus 179 G~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~---~---s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~---~ 248 (370)
T PRK09105 179 GTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA---P---SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAA---R 248 (370)
T ss_pred CcCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC---c---chHHHHhhCCCEEEEecccHhhcCCccceeeeec---C
Confidence 99999999999998764 58999999999877532 1 2223334567899999999999999999999854 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++++... .+..++..++.++...|.+.+ ++++.++.++++++.+.+.|+ +.+ +.+.++
T Consensus 249 ~~~i~~l~~~-------~~~~~~~~~~~aa~~~L~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~ 309 (370)
T PRK09105 249 PDLLAKLARF-------GHNPLPVPAAAAGLASLRDPK-------LVPQRRAENAAVREDTIAWLK-KKG----YKCTPS 309 (370)
T ss_pred HHHHHHHHhc-------CCCCcCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CCcCCC
Confidence 7766655432 123466777777777777543 346777888999999999998 776 456667
Q ss_pred CcceeeecCC--C-HHHHHHhhhcCcEEEcC---C--C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 354 QIGMFSFTGL--N-KAQSDNMTNKWHVYMTK---D--G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 354 ~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~---~--g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
.+++|. +.+ + .++.+++++ .||.+.. + + ||+++ ++++++++++.|+++++
T Consensus 310 ~~~f~~-~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 310 QANCFM-VDVKRPAKAVADAMAK-QGVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred CCcEEE-EeCCCCHHHHHHHHHH-CCcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence 777664 543 3 345667766 5998831 1 2 99986 47889999999988753
No 90
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-38 Score=300.03 Aligned_cols=315 Identities=17% Similarity=0.176 Sum_probs=239.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|+|+.|++ ..+ +++.+++++.+.. ....| |..+.+++|+++++++. +++++|++ |+|+++
T Consensus 52 ~~~i~l~~n~~----p~~-~~~~v~~a~~~~~---~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~~--t~Ga~~ 114 (380)
T PLN03026 52 EDIVKLDANEN----PYG-PPPEVLEALGNMK---FPYVY-PDPESRRLRAALAEDSG------LESENILV--GCGADE 114 (380)
T ss_pred cceEEccCCCC----CCC-CCHHHHHHHHhhH---hhccC-CCCCHHHHHHHHHHHhC------cChhhEEE--cCCHHH
Confidence 57899999986 222 2577888776521 12457 44578999999999964 34789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++..+. ...+.+||+|++++|+|+.|...++..|++++.++. .+++.+|++.+++.+.. +++.++++++|||||
T Consensus 115 ~i~~~~--~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~--~~~~~v~l~~P~NPT 188 (380)
T PLN03026 115 LIDLLM--RCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPR--TPDFSLDVPRIVEAVET--HKPKLLFLTSPNNPD 188 (380)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHHhc--cCCcEEEEeCCCCCC
Confidence 999874 333679999999999999999999999999999987 34578999999998843 256777779999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++|++.+ ++||+||+|.+|.+.+ .. .......+++++++||||.||++|+|+||++. +
T Consensus 189 G~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~---~ 255 (380)
T PLN03026 189 GSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---SR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAF---P 255 (380)
T ss_pred CCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---ch---HHHHHhCCCEEEEecchHhhcCccccceeeec---C
Confidence 9999999999997653 8999999999987531 11 12234557899999999999999999999754 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++.+.. ... . .+.+..+|.++..+|.+.++ +++.++.++++++++.+.|+ +++. +. ..+
T Consensus 256 ~~~i~~l~~----~~~-~-~~~~~~~q~aa~~aL~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~~---~~-~~p 317 (380)
T PLN03026 256 LSIIEYLWR----AKQ-P-YNVSVAAEVAACAALSNPKY-------LEDVKNALVEERERLFGLLK-EVPF---LE-PYP 317 (380)
T ss_pred HHHHHHHHH----hcC-C-CCCCHHHHHHHHHHhhCHHH-------HHHHHHHHHHHHHHHHHHHH-HCCC---Ce-ECC
Confidence 776655543 222 2 24667788888888876432 46778889999999999998 7752 23 346
Q ss_pred CcceeeecCC----CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHH
Q 015283 354 QIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 354 ~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
.+++|+|+.+ +. ++...++ ++||.+.++ + |||++ +.++++++++.|+++
T Consensus 318 ~~~~f~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 318 SDANFILCRVTSGRDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 6788888754 23 4455666 579999875 1 99996 467888888888764
No 91
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=5.7e-38 Score=297.09 Aligned_cols=321 Identities=14% Similarity=0.107 Sum_probs=234.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|+|+.|++ ..+ +++.+.+++.+.+.. ...|++. +..+||+++++++ .+++++|++ |+|+++
T Consensus 22 ~~~i~l~~~~n----~~~-~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~i--t~G~~~ 85 (360)
T PRK07392 22 DAILDFSASIN----PLG-PPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILP--GNGAAE 85 (360)
T ss_pred ccEEEeCCcCC----CCC-CCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEE--CCCHHH
Confidence 46899999876 333 268888888776643 3678654 5689999999997 245889999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc---ccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV---GLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
++.++. ..+.+||.|++++|+|..|...++..|++++.+++.++.++ ..+++.+++.. .++++++++|||
T Consensus 86 ~i~~~~---~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~nP~ 158 (360)
T PRK07392 86 LLTWAG---RELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLNNPH 158 (360)
T ss_pred HHHHHH---HHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc----cCCCEEEEeCCC
Confidence 999873 33557899999999999999999999999999998544333 23455554432 256677779999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||||.+++.+++.++ ++++++ +|+||+|.+|.+.+ ...+........+++++++||||.||++|+|+||++.
T Consensus 159 NPTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~---~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~- 230 (360)
T PRK07392 159 NPTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPPD---AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA- 230 (360)
T ss_pred CCCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccCc---cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC-
Confidence 999999998776665 667775 66699999998642 1112223334556899999999999999999999844
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
++++++++.. .. ...+++.++|.++..+|++.++ . +..++.++++++++.+.|+ +++. +..
T Consensus 231 --~~~~~~~~~~----~~--~~~~~s~~~q~~~~~~l~~~~~----~---~~~~~~~~~~r~~l~~~L~-~~~~---~~~ 291 (360)
T PRK07392 231 --HPDRLQRWQQ----WR--DPWPVNGLAAAAAIAALADRDF----Q---QQTWAWLPPAREALFQGLA-SLPG---LTP 291 (360)
T ss_pred --CHHHHHHHHh----hC--CCCCCCHHHHHHHHHHhccHHH----H---HHHHHHHHHHHHHHHHHHH-hCCC---cEE
Confidence 6675555432 22 1235778888888888887543 2 3455678888999999998 7631 344
Q ss_pred ccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283 351 ILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 351 ~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
. +.+++|+|+.+. .++..++++++||.+.||. ||+++. .++.+++.+.|++++.
T Consensus 292 ~-~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 292 L-PSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAILA 358 (360)
T ss_pred C-CCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhh
Confidence 3 467889998652 3456677777899998871 999975 4555777777776654
No 92
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-37 Score=291.01 Aligned_cols=319 Identities=16% Similarity=0.125 Sum_probs=236.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+..++|+.|++ ..+ +|+.+.+++.+.+.......|++ .+.+++|+++++++. +++++|++ |+|+++
T Consensus 22 ~~~~~l~~~~~----~~~-~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~------~~~~~i~i--t~G~~~ 87 (351)
T PRK14807 22 PYKYKMDANET----PFE-LPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYCS------VVPTNIFV--GNGSDE 87 (351)
T ss_pred CceeEccCCCC----CCC-CCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHhC------CCcccEEE--ecCHHH
Confidence 34688998887 333 36888998888765433367854 457899999999963 23789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++..++.. .+.+||+|++++|+|..+...++..|++++.+++ ++++.+|++.+++.+++ .+++++++++|+|||
T Consensus 88 ~l~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~--~~~k~v~l~~p~NPt 161 (351)
T PRK14807 88 IIHLIMLA--FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKL--KEDYTYDVGSFIKVIEK--YQPKLVFLCNPNNPT 161 (351)
T ss_pred HHHHHHHH--hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeec--CCCCCCCHHHHHHHhhc--cCCCEEEEeCCCCCC
Confidence 99987433 3779999999999999999988999999999987 34578999999998864 256667778999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++++ ++++.++|+||+|.++. + . ... ......+++++++||||.+|+||+|+||++. +
T Consensus 162 G~~~~~~~l~~l~---~~~~~~~ivDe~y~~~~-~-~--~~~---~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~---~ 228 (351)
T PRK14807 162 GSVIEREDIIKII---EKSRGIVVVDEAYFEFY-G-N--TIV---DVINEFENLIVLRTLSKAFGLAGLRVGYAVA---N 228 (351)
T ss_pred CCCCCHHHHHHHH---HhCCCEEEEeCcchhhc-c-c--chH---HHhhhCCCEEEEecchHhcccchhceeeeec---C
Confidence 9999998888875 45567899999998774 2 1 111 2233456899999999999999999999854 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++.+.. ... ..+.+.++|.++..+|++.. +++..+.++++++.+.+.|+ +.. + +.+. +
T Consensus 229 ~~~~~~~~~----~~~--~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~~~~r~~l~~~l~-~~~--g-~~~~-~ 289 (351)
T PRK14807 229 ENILKYLNL----VKS--PYNINSLSQVIALKVLRTGV--------LKERVNYILNERERLIKELS-KIP--G-IKVY-P 289 (351)
T ss_pred HHHHHHHHH----ccC--CCCcCHHHHHHHHHHHhHHH--------HHHHHHHHHHHHHHHHHHHH-hCC--C-cEEC-c
Confidence 786665543 222 23456778888888877532 23455567788888888887 652 1 4544 4
Q ss_pred CcceeeecCC-CHHHHHHhhhcCcEEEcCC-------C--eEEecCCCcccHHHHHHHHHHHh
Q 015283 354 QIGMFSFTGL-NKAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 354 ~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
.+++|+|+.+ +.+.+.+.+.++||.+.+. + ||+++. .++.+++++.|++++
T Consensus 290 ~~~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 290 SKTNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVSS--CEANDYLINGLKELL 350 (351)
T ss_pred CCccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHhh
Confidence 5577888876 3444444444579998663 1 999964 677889999998764
No 93
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-37 Score=288.41 Aligned_cols=317 Identities=15% Similarity=0.135 Sum_probs=237.7
Q ss_pred CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 32 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 32 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
..++.+||+.|++ ..+ +++.+++++.+.+.. ...|++..|.+++|+++++++. +++++|++ |+|+
T Consensus 20 ~~~~~~~l~~~~~----~~~-~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~------~~~~~I~i--t~Ga 84 (349)
T PRK07908 20 AGPGLLDFAVNVR----HDT-PPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARHG------RTPDEVLL--LAGA 84 (349)
T ss_pred CCCCeEEecCCCC----CCC-CCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHhC------cChhhEEE--CCCH
Confidence 3468999999986 222 368889988877643 3679888899999999999963 34789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++.+++. +.+ +.++++.|+|..+...++..|.+++.+++. .++.+|++.+ .+ ++++++++||||
T Consensus 85 ~~al~~~~~----l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~--~~~~~d~~~l----~~---~~~~i~l~np~N 150 (349)
T PRK07908 85 AEGFALLAR----LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLD--PPFRLDPAAV----PD---DADLVVIGNPTN 150 (349)
T ss_pred HHHHHHHHh----cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccC--cccCcChhHh----cc---CCCEEEEcCCCC
Confidence 999998733 556 567788999999999999999999999883 2377887744 22 456777799999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.++|.+++.++ |+ ++.++|+||+|.++..+. ..++.. ...+++++++||||.|+++|+|+||+++
T Consensus 151 PTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~~~----~~~l~~--~~~~~~i~i~S~SK~~~l~GlRiG~~~~-- 218 (349)
T PRK07908 151 PTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVPGE----PESLAG--DDLPGVLVLRSLTKTWSLAGLRVGYALG-- 218 (349)
T ss_pred CCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhccCC----cccccc--ccCCCEEEEeecccccCCccceeeeeec--
Confidence 99999998876655 55 578899999999875431 112211 1335799999999999999999999854
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++++... ... + +.+...+.++..++.+.. .+++++.++.++++++++.+.|+ +.+ +.+.
T Consensus 219 -~~~~~~~~~~~----~~~-~-~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~~r~~l~~~L~-~~~----~~~~ 281 (349)
T PRK07908 219 -APDVLARLTRG----RAH-W-PVGTLQLEAIAACCAPRA-----VAEAAADAARLAADRAEMVAGLR-AVG----ARVV 281 (349)
T ss_pred -CHHHHHHHHhc----CCC-C-CccHHHHHHHHHHhcccc-----hHHHHHHHHHHHHHHHHHHHHHH-hCC----cEec
Confidence 77766655432 221 2 233445555566666432 23456788999999999999998 775 4667
Q ss_pred cCCcceeeecCCC-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 352 LRQIGMFSFTGLN-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 352 ~~~~~~~~~~~~~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.+.+++|+|+.+. .+.+.+.++++||.+.||. |||++ ++++++++++.|++++..
T Consensus 282 ~p~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 282 DPAAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILKA 347 (349)
T ss_pred cCCCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHhc
Confidence 7788999999774 4556666677899998751 99994 688999999999998753
No 94
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6e-37 Score=286.44 Aligned_cols=310 Identities=15% Similarity=0.137 Sum_probs=227.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|+|+.|++ ..++ ++.+.+++.+.+.......|++ .|.++||+++++++...+ +++++|++ |+|+++
T Consensus 19 ~~~i~l~~~~~----~~~~-p~~~~~~~~~~~~~~~~~~Y~~-~~~~~Lr~aia~~~~~~~---~~~~~i~i--t~Ga~~ 87 (335)
T PRK14808 19 RDRTYLALNEN----PFPF-PEDLVDEVFRRLNSDTLRIYYD-SPDEELIEKILSYLDTDF---LSKNNVSV--GNGADE 87 (335)
T ss_pred CceeEecCCCC----CCCC-CHHHHHHHHHHhhhhhhhcCCC-CChHHHHHHHHHHhCCCC---CCcceEEE--cCCHHH
Confidence 47899999987 4433 6888888877664433244744 589999999999986542 56899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.++... + |.|++++|+|+.|...++..|++++.+++. +++.++... +. .+++++++||||||
T Consensus 88 ~i~~~~~~---~---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~----~~----~~~~i~i~nP~NPT 151 (335)
T PRK14808 88 IIYVMMLM---F---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVN----VG----EGDVVFIPNPNNPT 151 (335)
T ss_pred HHHHHHHH---h---CcEEECCCCHHHHHHHHHHcCCeEEEecCC--CcCCCChhH----cc----CCCEEEEeCCCCCC
Confidence 99987432 3 789999999999999999999999999983 234333221 22 34677789999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.++|.+++++|+ +++++||+||+|.+|... ... ......+++++++||||.++++|+|+||+++ +
T Consensus 152 G~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~~~---~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~---~ 217 (335)
T PRK14808 152 GHVFEREEIERIL----KTGAFVALDEAYYEFHGE----SYV---DLLKKYENLAVIRTFSKAFSLAAQRIGYVVS---S 217 (335)
T ss_pred CCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----chH---HHHHhCCCEEEEEechhhccCcccceEEEEe---C
Confidence 9999999999885 479999999999998521 111 2233456899999999999999999999855 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++++.. ... ..+.+.++|.++..++++.+ ..++.++.++++++++.+.|+ +.| +.+.++
T Consensus 218 ~~~~~~l~~----~~~--~~~~~~~~q~a~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~ 279 (335)
T PRK14808 218 EKFIDAYNR----VRL--PFNVSYVSQMFAKVALDHRE-------IFEERTKFIVEERERMKSALR-EMG----YRITDS 279 (335)
T ss_pred HHHHHHHHH----hcC--CCCCCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CEECCC
Confidence 776666543 221 23456677777777776432 234556677777888999998 776 455666
Q ss_pred CcceeeecCC---CHHHHHHhhhcCcEEEcCC--C-eEEecCCCcccHHHHHHHHHHH
Q 015283 354 QIGMFSFTGL---NKAQSDNMTNKWHVYMTKD--G-RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 354 ~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~--g-Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
+ |.|+|+.+ +...+.+.+.++||.+..- + ||+++. .++.+++++.|++.
T Consensus 280 ~-g~f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi~~--~~~~~~~~~~l~~~ 334 (335)
T PRK14808 280 R-GNFVFIFMEKEEKERLLEHLRAKNIAVRSFREGVRITIGK--REENDMILKELEVF 334 (335)
T ss_pred C-CeEEEEeCCCccHHHHHHHHHHCCeEEEECCCCeEEecCC--HHHHHHHHHHHHhh
Confidence 5 56777654 3334444455579999864 2 999864 68889999988753
No 95
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-37 Score=287.09 Aligned_cols=310 Identities=16% Similarity=0.167 Sum_probs=230.9
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
..|+|+.|.+ ..+ .++.+.+++.+.+.......|+ ..|.+++|+++++++. +++++|++ |+|++++
T Consensus 19 ~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~ 84 (337)
T PRK03967 19 YRIWLDKNEN----PFD-LPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFYG------LDAENIAV--GNGSDEL 84 (337)
T ss_pred ceEEecCCCC----CCC-CCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHhC------cCcceEEE--cCCHHHH
Confidence 5799999986 322 3678888887776432236784 5799999999999974 35789999 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283 115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 194 (410)
Q Consensus 115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG 194 (410)
+..+. ..+ +||+|+++.|+|+.|...++..|.+++.+++. +++.+|++.+++.+. +++++++++||||||
T Consensus 85 l~~~~---~~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~----~~~~v~~~~P~NPtG 154 (337)
T PRK03967 85 ISYLV---KLF-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKAK----NASAVFICSPNNPTG 154 (337)
T ss_pred HHHHH---HHh-CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhcc----CCCEEEEeCCCCCCC
Confidence 98763 333 79999999999999998889999999999883 457899999887653 345666799999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
.+++.+++.+++ ++++++|+||+|.+|... .. .......+++++++||||.||+||+|+||+++ ++
T Consensus 155 ~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~----~~---~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~---~~ 220 (337)
T PRK03967 155 NLQPEEEILKVL----ETGKPVVLDEAYAEFSGK----SL---IGLIDEYPNLILLRTFSKAFGLAGIRAGYAIA---NE 220 (337)
T ss_pred CCCCHHHHHHHH----hcCCEEEEECchhhhccc----ch---HHHHhhCCCEEEEecchHhhcchhhhheeeec---CH
Confidence 999998877764 479999999999987631 11 12233456899999999999999999999854 77
Q ss_pred hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283 275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 354 (410)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 354 (410)
++++++... .. .+ +.+.++|.++..+|++.++ ..+.++.+.++++.+.+.|. +. ..+.
T Consensus 221 ~~i~~~~~~----~~-~~-~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~--------~~~~ 278 (337)
T PRK03967 221 EIIDALYRI----KP-PF-SLNILTMKIVRLALDHYDL-------IEERIDYIIKERERVRRELG-EY--------AYPS 278 (337)
T ss_pred HHHHHHHhh----cC-CC-CCCHHHHHHHHHHHhCHHH-------HHHHHHHHHHHHHHHHHHhc-cC--------cCCC
Confidence 766555432 22 23 4678888888888876432 23444555667777787777 43 2356
Q ss_pred cceeeecCCCHHHHHHhhhcCcEEEcCCC-------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 355 IGMFSFTGLNKAQSDNMTNKWHVYMTKDG-------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 355 ~~~~~~~~~~~~~~~~ll~~~gi~v~~~g-------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+++|+|+.+ .+.+.+++ +||.+.+++ ||+++. .++.+++++.|+++.+.+
T Consensus 279 ~~~~~~~~~--~~~~~l~~-~gi~v~~~~~~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 279 DANFLLLKL--DAYDYLLE-NGIVVRKLSGRLEGHIRVTVGK--REENDEFIKALKEIKEGY 335 (337)
T ss_pred CCcEEEEhH--HHHHHHHH-CCEEEEeCCCCCCCeEEEecCC--HHHHHHHHHHHHHHHHhc
Confidence 788999865 35666665 599997542 999864 677888998888876543
No 96
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.2e-37 Score=290.37 Aligned_cols=323 Identities=15% Similarity=0.148 Sum_probs=244.9
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
..++++|+.|.+ ..+. ++.+++++.+.... ...|++. +..++|+++++++. +++++|++ |+|++
T Consensus 31 ~~~~i~l~~~~~--~~~~---~~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~~------~~~~~i~~--t~G~~ 94 (367)
T PRK02731 31 IADIIKLASNEN--PLGP---SPKAIEAIRAAADE--LHRYPDG-SGFELKAALAEKFG------VDPERIIL--GNGSD 94 (367)
T ss_pred CCceEEecCCCC--CCCC---CHHHHHHHHHHHHh--hcCCCCC-cHHHHHHHHHHHhC------cCHHHEEE--cCCHH
Confidence 357899999976 2232 57788888776643 3678654 45799999999973 23688999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++..++. ..+.+||.|++++|+|..|...++..|.+++.+++ +++.+|++.+++.+++ +++++++++|+||
T Consensus 95 ~~l~~~~~--~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~---~~~~v~l~~p~np 166 (367)
T PRK02731 95 EILELLAR--AYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTP---RTRLVFIANPNNP 166 (367)
T ss_pred HHHHHHHH--HhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCC---CCcEEEEeCCCCC
Confidence 99888733 33679999999999999998888889999998886 4577899999998864 5667777999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.++++++++.|+ +|+++|+||+|.++.+.+. ...++ ...+..+++++++||||.||++|+|+||+++
T Consensus 167 tG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~--- 239 (367)
T PRK02731 167 TGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA--- 239 (367)
T ss_pred CCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHH-HHHhhcCCEEEEeeehHhhcCcccceeeeeC---
Confidence 999999999999998875 6999999999998876421 11222 2234456899999999999999999999854
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++++.. ... .+ +.+.++|.++..+|++.. ++++.++.++++++.+.+.|+ +.| +.+.
T Consensus 240 ~~~~~~~l~~----~~~-~~-~~~~~~~~~a~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~- 300 (367)
T PRK02731 240 PPEIIDALNR----VRQ-PF-NVNSLALAAAVAALDDDA-------FVEKSRALNAEGMAWLTEFLA-ELG----LEYI- 300 (367)
T ss_pred CHHHHHHHHH----ccC-CC-CCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CccC-
Confidence 7775555443 222 22 356678888888887643 245777888889999999998 776 3444
Q ss_pred CCcceeeecCC----CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 353 RQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 353 ~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+..++|+|+.+ +. ++.+.+. ++||.+.++ + |++++ +.++++++++.|+++++.
T Consensus 301 ~~~g~~~~i~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 301 PSVGNFILVDFDDGKDAAEAYQALL-KRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLAA 366 (367)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHH-HCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHhc
Confidence 44578888765 33 3455555 579999885 2 99985 578999999999998754
No 97
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-37 Score=289.29 Aligned_cols=297 Identities=19% Similarity=0.238 Sum_probs=225.1
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCC
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDAR 149 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g 149 (410)
..|+. .+..++|+++++++. +++++|++ ++|+++++.+++. ..+.+| |.|++++|+|..|...++..|
T Consensus 54 ~~Y~~-~~~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~l~~~~~--~~~~~g~~~vlv~~p~y~~~~~~~~~~g 122 (364)
T PRK04781 54 RRYPD-PQPPGLRSALAALYG------CAPEQLLI--GRGSDEAIDLLVR--ALCVPGRDAVLVTPPVFGMYAVCARLQN 122 (364)
T ss_pred ccCCC-CCHHHHHHHHHHHhC------cChHHEEE--eCCHHHHHHHHHH--HhcCCCCCeEEEcCCChHHHHHHHHHcC
Confidence 56754 457899999999963 34789999 9999999999843 335688 799999999999998888999
Q ss_pred CCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 150 VPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 150 ~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
.+++.+++.+ .+++.+|++.+++.+.. +++.++++++||||||.+++.+++++++++|+ ++++||+||+|.+|.+.
T Consensus 123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 123 APLVEVPLVDGADGFHADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV 199 (364)
T ss_pred CEEEEEecCCCccCCCcCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC
Confidence 9999999843 34567888888665533 35677777899999999999999999999986 47899999999998853
Q ss_pred CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283 229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308 (410)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~ 308 (410)
. +...+.+..+++++++||||+||+||+|+||++. ++++++.+.. ... .+ +.+.++|.++..+|.
T Consensus 200 ---~---~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~---~~~l~~~l~~----~~~-~~-~~~~~~~~~a~~~l~ 264 (364)
T PRK04781 200 ---P---SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIA---NAELIAVLRR----CQA-PY-PVPTPCAALAEQALS 264 (364)
T ss_pred ---c---chHHHHhhCCCEEEEecChhhcccccceeeeeeC---CHHHHHHHHh----ccC-CC-CCCHHHHHHHHHHHh
Confidence 1 1223345567899999999999999999999854 7786555443 322 22 456777788888887
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-CHHHHHHhhhcCcEEEcCCC----
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG---- 383 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g---- 383 (410)
++.+ +...+..++++++++.+.+.|+ +++. +....+.+|+|+|+.+ +.+.+.+.++++||.+.++.
T Consensus 265 ~~~~-----~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~ 335 (364)
T PRK04781 265 APAL-----AVTARRVAEVRAERERLHAALA-QLPG---VRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVVRDQRAAPR 335 (364)
T ss_pred cccH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC---CCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEeeCCCCCC
Confidence 7532 1234455577889999999998 7731 3333467789999876 34444444556799998861
Q ss_pred -----eEEecCCCcccHHHHHHHHHHHhh
Q 015283 384 -----RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 384 -----Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
||+++ +.++.+++++.|+++..
T Consensus 336 ~~~~~Ris~~--~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 336 LSDALRITLG--TPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCCeEEEeCC--CHHHHHHHHHHHHHHHh
Confidence 99986 47889999999988754
No 98
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=8.1e-37 Score=288.65 Aligned_cols=323 Identities=15% Similarity=0.142 Sum_probs=239.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
..+|+|+.|.+ ..++ ++.+.+++.+.... ...| +..|.+++|+++++++. +++++|++ ++|+++
T Consensus 22 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~--~~G~~~ 85 (352)
T PRK03321 22 PGAIKLSSNET----PFGP-LPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHLG------VPPEHVAV--GCGSVA 85 (352)
T ss_pred ccceeccCCCC----CCCC-CHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHhC------cCHHHEEE--CCCHHH
Confidence 36899999987 3322 57888888776543 3567 56799999999999974 33789999 999998
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++..+.. ..+.+||+|+++.|+|..|...++..|.+++.+++. .++.+|++.+++.++. +++++++++|+|||
T Consensus 86 ~l~~~~~--~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p~NPt 158 (352)
T PRK03321 86 LCQQLVQ--ATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLT--PDHTHDLDAMAAAITD---RTRLIFVCNPNNPT 158 (352)
T ss_pred HHHHHHH--HhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC--CCCCCCHHHHHHhhcc---CCCEEEEeCCCCCc
Confidence 8887733 336799999999999999988889999999999873 2367899999988865 55666678999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++.++++.| +++++||+||+|.++.+.+.. ..++ ......+++++++||||.||++|+|+||+++ +
T Consensus 159 G~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~--~~~~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~ 231 (352)
T PRK03321 159 GTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDV--PDGL-ELVRDHPNVVVLRTFSKAYGLAGLRVGYAVG---H 231 (352)
T ss_pred CCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCC--CcHH-HHHhhCCCEEEEecchHHhhhHHHhhhhhcC---C
Confidence 9999999999998876 479999999999998864311 1122 2233456899999999999999999999854 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++.+... . ...+.+.++|.++...|...+. | .+..+.+.++++.+.+.|+ +.+ +...+
T Consensus 232 ~~~~~~~~~~----~--~~~~~s~~~q~~a~~~l~~~~~---~----~~~~~~~~~~r~~~~~~L~-~~~----~~~~~- 292 (352)
T PRK03321 232 PEVIAALRKV----A--VPFSVNSLAQAAAIASLAAEDE---L----LERVDAVVAERDRVRAALR-AAG----WTVPP- 292 (352)
T ss_pred HHHHHHHHHh----c--CCCCCCHHHHHHHHHHhcCHHH---H----HHHHHHHHHHHHHHHHHHH-HCC----CccCC-
Confidence 7766665432 1 2235677788777777764221 2 2333344455677888888 766 34333
Q ss_pred CcceeeecCC--CH-HHHHHhhhcCcEEEcCCC----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 354 QIGMFSFTGL--NK-AQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 354 ~~~~~~~~~~--~~-~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.+|+|+|+.+ +. ++.+.+ +++||.+.+.+ ||+++ +.+++++++++|+++++-
T Consensus 293 ~~g~~i~i~l~~~~~~~~~~l-~~~gI~v~~~~~~~iRi~~~--~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 293 SQANFVWLPLGERTADFAAAA-AEAGVVVRPFAGEGVRVTIG--APEENDAFLRAARAWRAG 351 (352)
T ss_pred CCCCEEEEeCCCCHHHHHHHH-HHCCEEEEccCCCcEEEeeC--CHHHHHHHHHHHHHHhcc
Confidence 4578899865 23 345555 55799998853 99984 689999999999998753
No 99
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.5e-36 Score=284.04 Aligned_cols=322 Identities=15% Similarity=0.123 Sum_probs=231.1
Q ss_pred CCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283 15 MAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD 94 (410)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~ 94 (410)
-.++.++..++..+... ...+++|+.+++ ..+.|. +.+.. .. ...|+. .. .+||+++++++.-.
T Consensus 6 ~~hg~~~~~~~~~~~~~-~~~~i~ls~Nen--p~~~~~--~~~~~---~~-----~~~Yp~-~~-~~L~~~ia~~~~~~- 69 (339)
T PRK06959 6 IAHGGNLHEAARRYGIP-YDAWLDLSTGIN--PHGYPV--PPVPA---DA-----WRRLPE-DD-DGLAACAARYYGAP- 69 (339)
T ss_pred cCCCchHHHHHHHcCCC-hhhhceeccCCC--CCCCCC--CCCCH---HH-----HHhCCC-ch-HHHHHHHHHHhCCC-
Confidence 34455555555444322 235799999986 333321 11111 11 144753 34 89999999996432
Q ss_pred CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283 95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 174 (410)
Q Consensus 95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 174 (410)
++++|++ ++|+++++.++ ...+.+|| |++++|+|+.|...++..|++++.++..+ +.+
T Consensus 70 ----~~~~I~i--~~Gs~e~i~~l---~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~---- 127 (339)
T PRK06959 70 ----DAAHVLP--VAGSQAAIRAL---PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL---- 127 (339)
T ss_pred ----CcccEEE--CcCHHHHHHHH---HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----
Confidence 2589999 99999999865 33456776 89999999999999999999998887621 222
Q ss_pred hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc
Q 015283 175 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 254 (410)
Q Consensus 175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 254 (410)
.+ ...++++||||||||.+++.++++++++.|.+++.++|+||+|.+|... . ++..+. ..+++++++|||
T Consensus 128 ~~---~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~---s~~~~~-~~~~vi~l~SfS 197 (339)
T PRK06959 128 PA---ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA---A---SLAAHT-DRPGLVVLRSVG 197 (339)
T ss_pred cc---cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc---c---cchhcc-CCCCEEEEecCh
Confidence 11 2345677999999999999999999999999999999999999998742 1 222222 346799999999
Q ss_pred ccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283 255 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 334 (410)
Q Consensus 255 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (410)
|.||++|+|+||++. ++++++++.+. .. .+ +.+..+|.++..+|++.++ .++.++.++++++++
T Consensus 198 K~~gl~GlRiGy~v~---~~~li~~l~~~----~~-~~-~vs~~~q~a~~~~L~~~~~-------~~~~~~~~~~~r~~l 261 (339)
T PRK06959 198 KFFGLAGVRAGFVLA---APALLAALRDA----LG-AW-TVSGPARHAVRAAFADAAW-------QAAMRERLAADGARL 261 (339)
T ss_pred hhcCCcchheEEEec---CHHHHHHHHHh----cC-CC-CCcHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHH
Confidence 999999999999854 77866665543 22 23 3567788888888887644 356788999999999
Q ss_pred HHHhhhccCCCCCcccccCCcceeeecCC-CH-HHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhh
Q 015283 335 FDSLSAKDKSGKDWSFILRQIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 335 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
.+.|+ ++| +... ..++|+|+.+ +. ++...+.+ +||.+...+ ||++++ +.++++++++.|+++++
T Consensus 262 ~~~L~-~~g----~~~~--~~~~f~~~~~~~~~~l~~~l~~-~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~~~ 332 (339)
T PRK06959 262 AALLR-AHG----FAVH--ATPLFSWTDDPRAAALHAALAR-RGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAECVP 332 (339)
T ss_pred HHHHH-HCC----CCcc--CcceEEEEeCCCHHHHHHHHHh-CCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHH
Confidence 99999 876 3433 2578889876 33 44555554 699997643 999966 77899999999998876
Q ss_pred hc
Q 015283 408 NV 409 (410)
Q Consensus 408 ~~ 409 (410)
.+
T Consensus 333 ~~ 334 (339)
T PRK06959 333 TL 334 (339)
T ss_pred HH
Confidence 43
No 100
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5e-37 Score=289.16 Aligned_cols=311 Identities=17% Similarity=0.199 Sum_probs=230.5
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
..++|+.+++ ..++ ++.+ .......| |.....++++++++++. +++++|++ ++|++++
T Consensus 29 ~~~~l~~Nen----p~~~-~~~~--------~~~~~~~Y-p~~~~~~l~~~~a~~~g------~~~~~I~~--~~Gs~e~ 86 (351)
T PRK01688 29 GDVWLNANEY----PTAV-EFQL--------TQQTLNRY-PECQPKAVIENYAAYAG------VKPEQVLV--SRGADEG 86 (351)
T ss_pred CceEecCCCC----CCCC-Chhh--------cccccccC-CCCChHHHHHHHHHHhC------CCHHHEEE--cCCHHHH
Confidence 4588988876 3222 3322 11113667 44556799999999953 24899999 9999999
Q ss_pred HHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 115 LRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 115 ~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
+.++... .+.+| |.|+++.|+|+.|...++..|++++.+++. +++.+|++.+++.+. ++.++++|||||||
T Consensus 87 i~~~~~~--~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~~~----~~~lv~l~nPnNPT 158 (351)
T PRK01688 87 IELLIRA--FCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL--DNWQLDLPAIADNLD----GVKVVYVCSPNNPT 158 (351)
T ss_pred HHHHHHH--hcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHHhcc----CCcEEEEeCCCCCC
Confidence 9998433 36686 999999999999999999999999999883 358899999988773 56677779999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++|++.|++ +.+||+||+|.+|... . +...+....+++++++||||.||++|+|+||+++ +
T Consensus 159 G~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~---~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~---~ 228 (351)
T PRK01688 159 GNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLA---N 228 (351)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC---C---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhC---C
Confidence 999999999999999986 6789999999998732 1 2223344567999999999999999999999854 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++.+.+ ... .| +.+..++.++..+|.+.. .+.+++.++.+.++++++.+.|+ +++. +....+
T Consensus 229 ~~~i~~l~~----~~~-~~-~v~~~~~~~a~~~L~~~~-----~~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~p 293 (351)
T PRK01688 229 EEVINLLLK----VIA-PY-PLSTPVADIAAQALSPQG-----IAAMRERVAEINANRQWLIAALK-EIPC---VEQVFD 293 (351)
T ss_pred HHHHHHHHh----ccC-CC-CCCHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHH-hCCC---CCeECC
Confidence 786665543 221 22 355666777777776532 13346677788888999999998 7742 333445
Q ss_pred CcceeeecCCC--HHHHHHhhhcCcEEEcCC----C-----eEEecCCCcccHHHHHHHHH
Q 015283 354 QIGMFSFTGLN--KAQSDNMTNKWHVYMTKD----G-----RISLAGLSLAKCEYLADAII 403 (410)
Q Consensus 354 ~~~~~~~~~~~--~~~~~~ll~~~gi~v~~~----g-----Ris~~~~~~~~i~~~~~~l~ 403 (410)
..+.|+|+.+. .++.+.|++ +||.++++ | |||++ +.++++++++.|+
T Consensus 294 s~~nfi~~~~~~~~~l~~~L~~-~gi~vr~~~~~~~~~~~iRis~~--~~~e~~~l~~al~ 351 (351)
T PRK01688 294 SETNYILARFTASSAVFKSLWD-QGIILRDQNKQPGLSNCLRITIG--TREECQRVIDALR 351 (351)
T ss_pred CCCcEEEEEcCCHHHHHHHHHH-CCeEEEECCCcCCCCCeEEEeCC--CHHHHHHHHHhhC
Confidence 66889888763 344556665 69999754 1 99986 5789999988763
No 101
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3.9e-36 Score=280.73 Aligned_cols=302 Identities=14% Similarity=0.130 Sum_probs=219.9
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
++|+|+.|++ ..+.+ ++.+.+ ... ..|+. +..+||+++++++. .++|++ |+|++++
T Consensus 21 ~~i~l~~ne~--p~~~~--~~~~~~---~~~-----~~yp~--~~~~Lr~~ia~~~~--------~~~I~i--t~Gs~~a 76 (330)
T PRK05664 21 DWLDLSTGIA--PWPWP--VPAIPA---DAW-----ARLPE--TDDGLEAAARAYYG--------APQLLP--VAGSQAA 76 (330)
T ss_pred HheeecCCcC--CCCCC--CcccCH---HHH-----HhCCC--ChHHHHHHHHHHhC--------CCCEEE--CcCHHHH
Confidence 5799999975 22222 122221 111 33643 33799999999962 368999 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283 115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 194 (410)
Q Consensus 115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG 194 (410)
+.++. .+.+||+|++++|+|+.|...++..|++++.+++ +++++.+. ++.++++++||||||
T Consensus 77 l~~~~----~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~----~~~~v~l~nP~NPTG 138 (330)
T PRK05664 77 IQALP----RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD----SLDVLVVVNPNNPTG 138 (330)
T ss_pred HHHHH----HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc----CCCEEEEeCCcCCCC
Confidence 98862 2469999999999999999999999999998876 23444443 344566789999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
.+++.+++++|+++|++++++||+||+|.++... . ++..+ ...+++++++||||.||+||+|+||++. ++
T Consensus 139 ~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~---~---s~~~~-~~~~~vi~~~SfSK~~gl~GlRiG~~v~---~~ 208 (330)
T PRK05664 139 RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ---H---SLAAC-AHRPGLIVLRSFGKFFGLAGARLGFVLA---EP 208 (330)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc---c---ccccc-ccCCCEEEEeeccccccCCCcceEEEEe---CH
Confidence 9999999999999999999999999999876521 1 22222 2346899999999999999999999854 77
Q ss_pred hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283 275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 354 (410)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 354 (410)
++++.+... .. .+ +.+..++.++..+|.+..+ .++.++.++++++++.+.|+ +.+ +.. .+.
T Consensus 209 ~l~~~~~~~----~~-~~-~~~~~~~~~~~~~L~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~----~~~-~~~ 269 (330)
T PRK05664 209 ALLRALAEL----LG-PW-TVSGPTRWLAQAALADTPW-------QRRQRERLLAASQRLAALLR-RHG----LTP-AGG 269 (330)
T ss_pred HHHHHHHHh----cC-CC-CCCHHHHHHHHHHHhChHH-------HHHHHHHHHHHHHHHHHHHH-HCC----Ccc-cCC
Confidence 766655432 22 22 3456777788888876532 35678889999999999998 776 232 122
Q ss_pred cceeeecCC-CHHHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 355 IGMFSFTGL-NKAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 355 ~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.++|+|+.. +...+.+.+.++||.+.+-+ ||+++. +.++++++.+.|+++.++
T Consensus 270 ~~~f~~~~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 270 CALFQWVRTEDAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred cceEEEEecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 337888865 34444444455799997532 999986 678899999999887665
No 102
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.6e-36 Score=280.64 Aligned_cols=304 Identities=13% Similarity=0.118 Sum_probs=220.6
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
.+|+|+.+++ |+.+ . .....| |.....+||+++++++... +++|++ |+|++++
T Consensus 17 ~~i~l~~Nen------p~~~----------~--~~~~~Y-p~~~~~~lr~~ia~~~~~~------~~~I~i--t~Gs~~~ 69 (332)
T PRK06425 17 RIIDFSANIN------DFMD----------I--GDISIY-PEISYTDIEDQIKIYTQGL------KIKVLI--GPGLTHF 69 (332)
T ss_pred CEEEeccccC------CCcC----------h--hhcccC-cCcCHHHHHHHHHHHhCCC------cceEEE--CCCHHHH
Confidence 5789998876 3310 0 112557 5556889999999996433 788999 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283 115 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 194 (410)
Q Consensus 115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG 194 (410)
+.++.. .+.+| .|++++|+|+.|...++..|++++.+|+.+ +.+|.+.++ . .+++++++++||||||
T Consensus 70 l~~~~~---~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~----~--~~~k~v~l~nP~NPTG 136 (332)
T PRK06425 70 IYRLLS---YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILN----N--YNFDLIFIVSPDNPLG 136 (332)
T ss_pred HHHHHH---HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHh----h--cCCCEEEEeCCCCCcC
Confidence 998743 35676 577779999999999999999999999832 334544333 2 1455666689999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
.++|.+++++|+++|++++++||+||+|.+|.+++ . .+...+....+++++++||||.+|+||+|+||+++ ++
T Consensus 137 ~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~---~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~---~~ 209 (332)
T PRK06425 137 NLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR---A-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIAT---DD 209 (332)
T ss_pred CccCHHHHHHHHHHHHHcCCEEEEecchhcccccc---c-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeec---CH
Confidence 99999999999999999999999999999998542 1 12223344557999999999999999999999854 77
Q ss_pred hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283 275 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 354 (410)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 354 (410)
++++++.. ... .+. .+..++ .++.... +..++++.++.++++++++.+.|+ +.| +....+.
T Consensus 210 ~li~~l~~----~~~-~~~-~~~~~~----~~l~~~~----~~~~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~~ 270 (332)
T PRK06425 210 YNMKISRK----ITE-PWS-VCDPAI----DFIRSID----LDYVAKHSLDIMENERSYLINNLE-AMG----FRAAGDP 270 (332)
T ss_pred HHHHHHHH----cCC-CCc-cCHHHH----HHHHHhh----hHHHHHHHHHHHHHHHHHHHHHHH-HCC----CEECCCC
Confidence 76555443 221 121 222222 2222211 133456788999999999999999 876 4554444
Q ss_pred cceeeecCC-C-HHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283 355 IGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 355 ~~~~~~~~~-~-~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
.|.|+|+.+ + .++.+.+++ +||.+.|+. ||+++ +.++.++++++|+++++
T Consensus 271 ~g~f~~~~~~~~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~ 332 (332)
T PRK06425 271 SANFITFMIPDAHDFYSYLLK-NGILVRLLDDYECLGEQYIRIAIR--RRSFNIKLVNALRNFLN 332 (332)
T ss_pred CceEEEEEcCCHHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHhC
Confidence 677888765 3 445667766 699998751 99996 47899999999998763
No 103
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=5.4e-36 Score=282.54 Aligned_cols=315 Identities=16% Similarity=0.168 Sum_probs=239.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|||+.|.+ +.++ ++.+.+++.++... ...|++..+ +++|+++++++. +++++|++ ++|+++
T Consensus 19 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~--~~G~~~ 82 (346)
T TIGR01141 19 KEVIKLNSNEN----PFGP-PPKAKEALRAEADK--LHRYPDPDP-AELKQALADYYG------VDPEQILL--GNGSDE 82 (346)
T ss_pred CceEEccCCCC----CCCC-CHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHhC------cChHHEEE--cCCHHH
Confidence 46999999987 3333 68889988877532 266866555 899999999974 23688999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++..+. ...+.+||+|++++|+|+.+...++..|.+++.+++. .++.+|++.+++.+.+ +++++++++|+|||
T Consensus 83 ~l~~~~--~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~---~~~~v~l~~p~Npt 155 (346)
T TIGR01141 83 IIELLI--RAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLD--EDGQLDLEDILVAIDD---KPKLVFLCSPNNPT 155 (346)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccC--CCCCCCHHHHHHhcCC---CCCEEEEeCCCCCC
Confidence 998773 3346799999999999999988888999999999883 3467899999987653 66777778999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.++++++++.|+ +++++|+|++|.++...+ ... ......+++++++|+||.+|++|+|+||+++ +
T Consensus 156 G~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~~~---~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~ 225 (346)
T TIGR01141 156 GNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---STL---PLLAEYPNLIVLRTLSKAFGLAGLRIGYAIA---N 225 (346)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---cHH---HHHhhCCCEEEEehhhHhhhchhhhceeeec---C
Confidence 99999999999999887 799999999999776431 111 1223345789999999999999999999854 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccccc
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFIL 352 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~ 352 (410)
+++++++.. ... ..+.+..+|.++..++++.+ +.++.+++++++++.+.+.|+ ++ | +...
T Consensus 226 ~~~~~~~~~----~~~--~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~g----~~~~- 286 (346)
T TIGR01141 226 AEIIDALNK----VRA--PFNLSRLAQAAAIAALRDDD-------FIEKTVEEINAERERLYDGLK-KLPG----LEVY- 286 (346)
T ss_pred HHHHHHHHh----ccC--CCCCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHH-hcCC----CEEC-
Confidence 776555443 222 22456677787777777643 246788889999999999998 77 4 3433
Q ss_pred CCcceeeecCCC---HHHHHHhhhcCcEEEcCC-------C--eEEecCCCcccHHHHHHHHH
Q 015283 353 RQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAII 403 (410)
Q Consensus 353 ~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~~i~~~~~~l~ 403 (410)
+..++|+|+.+. .++.+.+. ++||.+.|+ + |+|++ ++++++++++.|+
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~L~-~~gI~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 287 PSDANFVLIRFPRDADALFEALL-EKGIIVRDLNSYPGLPNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred CCcCCEEEEecCCCHHHHHHHHH-HCCeEEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHhC
Confidence 445778887653 34455555 479999875 2 99975 6889999988763
No 104
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-36 Score=283.11 Aligned_cols=311 Identities=15% Similarity=0.123 Sum_probs=229.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...++|+.|++ ..++ ++.+ . .. . ...|++ .+.++||+++++++. +++++|++ |+|+++
T Consensus 31 ~~~~~l~~ne~----~~~~-~~~~-----~-~~-~-~~~Yp~-~~~~~Lr~aia~~~~------~~~~~I~i--t~Gs~~ 88 (354)
T PRK04635 31 RGDIWINANES----PFNN-EYKL-----D-LA-R-LNRYPE-CQPPELINAYSAYAG------VAPEQILT--SRGADE 88 (354)
T ss_pred CCcEEeeCCCC----CCCC-Chhh-----h-hH-H-hccCCC-CCHHHHHHHHHHHhC------cCHHHEEE--eCCHHH
Confidence 35689998886 3222 2222 1 11 2 266854 468999999999852 34899999 999999
Q ss_pred HHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 114 SLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 114 a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
++.+++.. .+.+| |+|++++|+|..|...++..|++++.+|+. +++.+|++.++. + . +++++++++||||
T Consensus 89 ~i~~~~~~--~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~-~---~~~li~i~nP~NP 159 (354)
T PRK04635 89 AIELLIRA--FCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L-D---GAKLVFICNPNNP 159 (354)
T ss_pred HHHHHHHH--hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c-c---CCCEEEEeCCCCC
Confidence 99998433 35688 899999999999999999999999999983 357788888763 3 2 5667778999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|++.|+ +++||+||+|.+|... . +...+....+++++++||||.+|++|+|+||+++
T Consensus 160 TG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~---~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~--- 228 (354)
T PRK04635 160 TGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE---Y---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLA--- 228 (354)
T ss_pred CCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC---c---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhC---
Confidence 999999999999998877 4999999999988732 1 2223334557899999999999999999999854
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++.+.. ... . .+.+...+.++..+|.+... +.+++.++.++++++++.+.|+ +++. +.+.+
T Consensus 229 ~~~~~~~l~~----~~~-~-~~~~~~~~~~a~~~l~~~~~-----~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~ 293 (354)
T PRK04635 229 NEELIEILMR----VIA-P-YPVPLPVSEIATQALSEAGL-----ARMKFQVLDLNAQGARLQAALS-MYGG---AKVLE 293 (354)
T ss_pred CHHHHHHHHh----hcC-C-CCCCHHHHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC---ceECC
Confidence 7776655443 211 1 24555667777777765432 2345667788999999999998 7752 35555
Q ss_pred CCcceeeecCC-CHHHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHH
Q 015283 353 RQIGMFSFTGL-NKAQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 353 ~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~ 404 (410)
++ |.|+|+.+ +.+.+.++++++||.+.++ + |||++ +.++++.++++|++
T Consensus 294 ~~-g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~ 351 (354)
T PRK04635 294 GN-GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRN 351 (354)
T ss_pred CC-CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence 54 67888766 4444555566689998643 2 99985 58999999999875
No 105
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.8e-35 Score=278.39 Aligned_cols=313 Identities=16% Similarity=0.165 Sum_probs=227.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec-CChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t-~ggt 112 (410)
.++|+|+.|++ ..+ .+|.+.+++.+.... ...|++. ..+++|+++++++. +++++|++ + +|++
T Consensus 34 ~~~i~l~~~~~----~~~-~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~~------~~~~~i~~--~~~Ga~ 97 (361)
T PRK00950 34 ESIIKLGSNEN----PLG-PSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYTG------VPVENIIV--GGDGMD 97 (361)
T ss_pred cceEEccCCCC----CCC-CCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHhC------CCHHHEEE--eCCCHH
Confidence 37899999976 222 257788887766543 2567554 44899999999963 23677766 4 5566
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++..+.. ..+.+||.|++++|+|+.+...++..|++++.++. ++++.+|++.+++.+.. +++++++++|+||
T Consensus 98 ~~i~~~~~--~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~---~~~~v~~~~p~np 170 (361)
T PRK00950 98 EVIDTLMR--TFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITE---KTKVIFLCTPNNP 170 (361)
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhcc---CCCEEEEeCCCCC
Confidence 77777633 23569999999999999999888999999988885 45678999999988864 5666666899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.++++++ |+++|+++|+||+|.++... ....+....+++++++||||.+|++|+|+||+++
T Consensus 171 tG~~~~~~~l~~l---~~~~~~~li~De~y~~~~~~-------~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~--- 237 (361)
T PRK00950 171 TGNLIPEEDIRKI---LESTDALVFVDEAYVEFAEY-------DYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFV--- 237 (361)
T ss_pred CCCCcCHHHHHHH---HHHCCcEEEEECchhhhCcc-------chHHHHHhcCCEEEEEeehHhhcCchhhcchhcC---
Confidence 9999999887776 67789999999999887621 1122334446899999999999999999999744
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++.+.. ... . .+.+.+++.++...+.+.++ +++.+++++++++.+.+.|. +.+.
T Consensus 238 ~~~~~~~~~~----~~~-~-~~~~~~~~~~a~~~l~~~~~-------~~~~~~~~~~~r~~l~~~l~--------~~~~- 295 (361)
T PRK00950 238 PEWLIDYYMR----AKT-P-FSLTRLSQAAAIAALSDKEY-------IEKSIEHGIKSREYLYNELP--------FKVY- 295 (361)
T ss_pred CHHHHHHHHH----hcC-C-CCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHhhcC--------eeEC-
Confidence 7775555443 222 1 23556677777777765432 35666777778877776654 2333
Q ss_pred CCcceeeecCC---C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 353 RQIGMFSFTGL---N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 353 ~~~~~~~~~~~---~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
+.+++|+|+.+ + .++++.+.+ +||.+.|+ + ||+++ +.++++++++.|+++++
T Consensus 296 ~~~~~~i~~~~~~~~~~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 296 PSEANFVLVDVTPMTAKEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIVE 361 (361)
T ss_pred CCcceEEEEECCCCCHHHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHhC
Confidence 45678888754 3 344666665 69999874 1 99986 56899999999998763
No 106
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.3e-35 Score=277.45 Aligned_cols=316 Identities=18% Similarity=0.188 Sum_probs=232.3
Q ss_pred CCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCc
Q 015283 18 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 97 (410)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~ 97 (410)
+.|+..+++++. .+++++++|+.|.+ +.+ ++ ..+... .. ...|++..+ +++|+++++++.
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~--~~-~~~~~~----~~-~~~y~~~~~-~~lr~~la~~~~------ 61 (330)
T TIGR01140 2 GGNLRRAAARYG-IPPEDWLDFSTGIN----PLG--PP-VPPIPA----SA-WARYPDPEY-DELRAAAAAYYG------ 61 (330)
T ss_pred CccHHHHHHHcC-CChhheeEccccCC----CCC--CC-hhhcch----HH-HhhCCCccH-HHHHHHHHHHhC------
Confidence 456777776653 23457899999986 222 22 222111 12 366866655 999999999963
Q ss_pred ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283 98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
+++++|++ |+|+++++..+. ..+.+| .|++++|+|..|...++..|.+++.++ |++.+++.+.+
T Consensus 62 ~~~~~i~~--t~G~~~~i~~~~---~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~~- 125 (330)
T TIGR01140 62 LPAASVLP--VNGAQEAIYLLP---RLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALEE- 125 (330)
T ss_pred CChhhEEE--CCCHHHHHHHHH---HHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhccc-
Confidence 23789999 999999998863 335677 799999999999999999998887775 67888887743
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
+.++++++|+||||.+++.+++++|+++|+++|++||+||+|.++... . ++..+.+..+++++++|+||.+
T Consensus 126 ---~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~---~---~~~~~~~~~~~~i~~~S~SK~~ 196 (330)
T TIGR01140 126 ---LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD---A---SLAPQAARFPGLVVLRSLTKFF 196 (330)
T ss_pred ---CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc---c---chhhHhccCCCEEEEEecchhh
Confidence 335666899999999999999999999999999999999999988743 1 2222233456899999999999
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
|++|+|+||+++ ++++++++.. ... .+ +++..+|.++..++++.++ .++.+++++++++.+.+.
T Consensus 197 g~~G~R~G~i~~---~~~~~~~l~~----~~~-~~-~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~ 260 (330)
T TIGR01140 197 GLAGLRLGFVVA---HPALLARLRE----ALG-PW-TVNGPARAAGRAALADTAW-------QAATRARLAAERARLAAL 260 (330)
T ss_pred cCchhhhhheeC---CHHHHHHHHh----cCC-CC-CchHHHHHHHHHHHhchHH-------HHHHHHHHHHHHHHHHHH
Confidence 999999999854 6775555443 221 22 4566778888888886543 245678899999999999
Q ss_pred hhhccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHH
Q 015283 338 LSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAI 402 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l 402 (410)
|+ +++. +.. .+.+++|.|+.+ ..++.+++++ +||.+.|+. ||+++. +.++ +.++++|
T Consensus 261 L~-~~~~---~~~-~~~~~~f~~~~~~~~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 261 LA-RLGG---LEV-VGGTALFLLVRTPDAAALHEALAR-RGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred HH-hCCC---ceE-CCCCCeEEEEEcCCHHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 98 8762 233 345789999876 2455667766 699998862 999976 4444 7766665
No 107
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.3e-34 Score=268.35 Aligned_cols=292 Identities=13% Similarity=0.162 Sum_probs=205.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|+|+.|++ .. .|+.+.+++.+.... ...|+. ...+|+++++++. ++|++ |+|+++
T Consensus 8 ~~~i~l~~~~n----p~--~p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~v--t~G~~~ 65 (311)
T PRK08354 8 EGLIDFSASVN----PY--PPEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVI--TAGITE 65 (311)
T ss_pred cceeEecCCCC----CC--CCHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEE--CCCHHH
Confidence 36899999875 22 257788888776543 256742 5679999999962 46888 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.++. ..+.+||+|++++|+|+.|...++..|.+++.++ +|++.+++.+++ +.++++++|||||
T Consensus 66 al~~~~---~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~~----~~~vi~~~P~NPT 130 (311)
T PRK08354 66 ALYLIG---ILALRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVER----NSVVFFCNPNNPD 130 (311)
T ss_pred HHHHHH---HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhcC----CCEEEEecCCCCC
Confidence 998763 3345999999999999999999999999886653 478888877653 3456669999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++|+++|+++|+++|+||+|.+|.+++ . .. ..+++++++||||+|++||+|+||+++
T Consensus 131 G~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~---~--~~-----~~~~vi~~~S~SK~~~l~GlRiG~~v~---- 196 (311)
T PRK08354 131 GKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP---E--SP-----EGENIIKLRTFTKSYGLPGIRVGYVKG---- 196 (311)
T ss_pred CCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc---c--cc-----CCCcEEEEeccHhhcCCccceeeeeee----
Confidence 999999999999999999999999999999998642 1 11 246899999999999999999999843
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
..+.+ +.... .+ ..+..++.++..++.+. + +++++.++.+++.++.+.+.+. .++
T Consensus 197 --~~~~l----~~~~~-~~-~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~l~~~l~-----------~~~ 251 (311)
T PRK08354 197 --FEEAF----RSVRM-PW-SIGSTGYAFLEFLIEDD-F-----EHLRKTMPLIWREKERFEKALY-----------VKS 251 (311)
T ss_pred --hHHHH----HHcCC-Cc-cCCHHHHHHHHHHHHhH-H-----HHHHHHHHHHHHHHHHHHHhcC-----------CCC
Confidence 22333 22222 22 23334455555555532 1 2233444445544444433221 235
Q ss_pred CcceeeecCC-C-HHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHH
Q 015283 354 QIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 354 ~~~~~~~~~~-~-~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
.++++. ... + .++++.+ .++||.+.||. ||+++. .++.+++++.|+++
T Consensus 252 ~~~~~~-~~~~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~~ 309 (311)
T PRK08354 252 DANFFI-KDVGDAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRD--REENEKLIRALREW 309 (311)
T ss_pred CCcEEE-EECCCHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCC--HHHHHHHHHHHHHh
Confidence 555555 444 3 3445555 45799999873 999964 56678888888775
No 108
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-33 Score=236.56 Aligned_cols=362 Identities=16% Similarity=0.125 Sum_probs=259.2
Q ss_pred ceecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHH----HHhhccC----CCccCcC
Q 015283 4 AVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE----NLMLERG----ENKEYLP 75 (410)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~----~~~~~~~----~~~~y~~ 75 (410)
|+.|++++++.+++-| +. +..+.++.|.|+-|.| .. .|++.+.+ .+.+.++ ...+|..
T Consensus 7 Gdkft~~sGi~~lMdD----l~---d~Lrt~g~imLggGNP----a~---iPem~~~f~~~~aemla~~~~~e~~cnY~~ 72 (417)
T COG3977 7 GDKFTRHSGITQLMDD----LN---DGLRTPGAIMLGGGNP----AR---IPEMDDYFQDLLAEMLASGKATEALCNYDG 72 (417)
T ss_pred hHHhhhhhhHHHHHHH----HH---hhccCCCceeeCCCCc----cc---ChhHHHHHHHHHHHHHhcchHHHHHhcCCC
Confidence 6788889888887764 22 3334467899998876 22 35555444 4444332 2478999
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC-CCC--EEEE-cCCCCcchhhhhhh----
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGA--KVLI-SSPTWGNHKNIFND---- 147 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~-~gd--~Vl~-~~p~y~~~~~~~~~---- 147 (410)
++|...|.+++++.+.+.+|+++++.||.+ |+|++.+..-+++++.-.. .|+ +|+. ..|.|.+|....-.
T Consensus 73 pQG~~~li~ala~~l~~~ygwnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~f 150 (417)
T COG3977 73 PQGKAVLIDALAKMLRREYGWNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLF 150 (417)
T ss_pred CcchhHHHHHHHHHHHHHhCCCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccce
Confidence 999999999999999999999999999999 9999999999877776533 553 5555 46899888654331
Q ss_pred --CCCCccceeeecCC--CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC
Q 015283 148 --ARVPWSEYRYYDPK--TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 223 (410)
Q Consensus 148 --~g~~~~~v~~~~~~--~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~ 223 (410)
+..++..++ .. .+..|++++.- . +.+-+++++.|.||||.+++.+|+.+|..+|++||+.+++|.+|.
T Consensus 151 Vs~kP~iel~~---~g~FKY~vDF~~l~i--~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg 222 (417)
T COG3977 151 VSAKPNIELLP---AGQFKYHVDFEHLHI--G---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYG 222 (417)
T ss_pred eeccCCccccc---ccceeeccCHHHccc--c---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccC
Confidence 222222222 11 13456666643 2 367788889999999999999999999999999999999999987
Q ss_pred CCCCCCCCCchhHhHHH-hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH
Q 015283 224 GFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI 302 (410)
Q Consensus 224 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
--..+ . .+... .-..++++.+.|+||. |+||.|+|-++. +++ +.+.+.++.......|...++.+
T Consensus 223 ~PFP~-i-----ifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIa---ne~----viqaitnmn~iisLap~~~G~Ai 288 (417)
T COG3977 223 VPFPG-I-----IFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIA---NEK----VIQAITNMNGIISLAPGRMGPAI 288 (417)
T ss_pred CCCCc-e-----ecccccccCCCCEEEEeehhhc-CCCCcceeEEEc---cHH----HHHHHHhccceeeecCCCccHHH
Confidence 54322 1 11111 1245699999999995 899999999755 777 45545555444445778888888
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-----CCHHHHHHhhhcCcE
Q 015283 303 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-----LNKAQSDNMTNKWHV 377 (410)
Q Consensus 303 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi 377 (410)
++.+++.+++.+.-+ +-+|-.|+++.+...+.|++.++ ...+.+.+|.+++|+|+- ++...+.+.+|+.||
T Consensus 289 a~~mie~gdl~rlse---qVIrPFY~~~~q~~~~~l~~~lp-~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gv 364 (417)
T COG3977 289 AAEMIESGDLLRLSE---QVIRPFYRNRVQTTIAILRRYLP-EYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGV 364 (417)
T ss_pred HHHHhhcchHHHHHH---HhhhHHHHHHHHHHHHHHHHhcC-ccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeE
Confidence 999999887754322 34455666666666666653444 233678899999998873 355555445566799
Q ss_pred EEcCCC-----------------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 378 YMTKDG-----------------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 378 ~v~~~g-----------------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.++||. |+++.. +++.++..+++|.+.+++
T Consensus 365 l~VPG~~FFpGl~~ewpH~hqC~Rmn~~~-~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 365 LMVPGHYFFPGLDKEWPHTHQCMRMNYVP-EPEKIEKGVAILAEEVER 411 (417)
T ss_pred EEecccccCCCCCCCCCCccceEEEecCC-CHHHHHHHHHHHHHHHHH
Confidence 999982 999987 899999999999888765
No 109
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-31 Score=237.45 Aligned_cols=337 Identities=16% Similarity=0.136 Sum_probs=257.6
Q ss_pred cHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC-CCCE
Q 015283 54 LDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAK 130 (410)
Q Consensus 54 ~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~-~gd~ 130 (410)
|..+++.....++. +....|....|++-.|+.+|+++.+.+|.+.++++|.+ |.|++.|+..+..++ +. +.+.
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~il~l~--~~~~~~G 163 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSILSLL--IAGKKTG 163 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHHHHHH--hcCCCCc
Confidence 34444444444422 34577999999999999999999999998899999999 999999999975544 44 7799
Q ss_pred EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 015283 131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADV 208 (410)
Q Consensus 131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~ 208 (410)
|++|-|.|+-|...+..+|...+.+.+.++.+|.+|.+++++.+.+. .-+.+++++-||.||||+++|.+.+++|+.+
T Consensus 164 vliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~f 243 (475)
T KOG0258|consen 164 VLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICF 243 (475)
T ss_pred eEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHH
Confidence 99999999999999999999999999988899999999999887663 2345666667899999999999999999999
Q ss_pred HHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc----CC---cEEEEecccccc-cccCCCcceEEEEeCCchhHHHH
Q 015283 209 IQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR----GM---ELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 209 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~----~~---~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
|.++++.++.||+|++..+.+ +...+++.+.+.+ .. ..+.++|.||.+ |-.|.|-||+-++.-+++..+.+
T Consensus 244 a~~~~l~llaDEVYQ~Nvy~~-~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi 322 (475)
T KOG0258|consen 244 AAEEGLVLLADEVYQDNVYTT-GSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQI 322 (475)
T ss_pred HHHcCeEEechHHHHhhccCC-CcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHH
Confidence 999999999999999998763 3345566554322 11 456678889986 66899999998766677765555
Q ss_pred HHHHHhhccCcccCCChhHHHHHHHHhCC----hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcc
Q 015283 281 KSQLKRLARPMYSNPPVHGARIVANVVGN----PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIG 356 (410)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 356 (410)
.+... ....++..+|.......+- ....+.|..+...+...++++...+.+.+. ++.. +.+.+++++
T Consensus 323 ~Kl~s-----i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~n-s~~g---i~cn~~qGA 393 (475)
T KOG0258|consen 323 KKLAS-----IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFN-SLEG---ISCNPVQGA 393 (475)
T ss_pred HHHHh-----hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHh-hcCc---eeeccCccc
Confidence 55333 2234555555544444442 123445666777888889999999999998 7742 689999999
Q ss_pred eeeecCC---------------CHH-H-HHHhhhcCcEEEcCCC-----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 357 MFSFTGL---------------NKA-Q-SDNMTNKWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 357 ~~~~~~~---------------~~~-~-~~~ll~~~gi~v~~~g-----------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+|+|..+ .++ + +.+||+..||+++||. |.++-. .. + +.++++++.-++
T Consensus 394 MY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~fH~~ 469 (475)
T KOG0258|consen 394 MYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKFHAE 469 (475)
T ss_pred eeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHHHHH
Confidence 9998743 333 3 6799999999999982 888743 23 4 777777766443
No 110
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-32 Score=243.77 Aligned_cols=323 Identities=16% Similarity=0.114 Sum_probs=244.9
Q ss_pred CccCcCCcccHHHHHHHHHHhcCCCCCc-ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC
Q 015283 70 NKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA 148 (410)
Q Consensus 70 ~~~y~~~~g~~~lr~aia~~~~~~~~~~-~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~ 148 (410)
..+|++..|.+++...+.++.....+.+ +..=+|++ |+|.|.+++.+.+.+ +++||.|++..++|++.....+..
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~~l~~~--~N~gd~vlie~~ty~~AL~s~~a~ 168 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFKVLRTL--INRGDHVLIEEYTYPSALQSMEAL 168 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHHHHHHh--hcCCCceEEecccchHHHHhcccc
Confidence 4789999999999999999744233333 33336877 999999999984444 889999999999999999999999
Q ss_pred CCCccceeeecCCCcccChhhHHHHHhcC-------CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 149 RVPWSEYRYYDPKTVGLDFEGMIADIKAA-------PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 149 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-------~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
|++++.|++ +..++++|.|++.+..- +...+++.+++-+||||..++.+..++|.++|++|+.+||+||.
T Consensus 169 gv~~ipv~m---d~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 169 GVKIIPVKM---DQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred CceEEeccc---cCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 999988887 44568999999888652 12345556888899999999999999999999999999999999
Q ss_pred CCCCCCCCCCC------chhHhHHHh----------hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283 222 YQGFASGSLDN------DASSVRLFA----------TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 285 (410)
Q Consensus 222 y~~~~~~~~~~------~~~~~~~~~----------~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 285 (410)
|..+-++.+++ ...+.+.+. +...+||...||||.++ ||+|+||+.+ ++-.++++...
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~---~~~~l~ril~~-- 319 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITG---NSLFLKRILDL-- 319 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeec---CHHHHHHHhhh--
Confidence 98776553211 111111111 23459999999999997 9999999644 77655554433
Q ss_pred hhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-
Q 015283 286 RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN- 364 (410)
Q Consensus 286 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~- 364 (410)
...++.+|+.+.|.+.-.+|+.-. .+-|.+.+.+.+..|.+++.++..++.+.++. ..+++.+|.+|+|+|+.++
T Consensus 320 --ae~~t~~pSg~sq~iv~a~l~~wg-qeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~-~~~~~~~P~aGmFiwv~i~~ 395 (472)
T KOG0634|consen 320 --AEVATSGPSGFSQGIVYAMLKRWG-QEGFLRWIQHLRSSYTERRNALLSALDKYLPK-SVCEYHPPKAGMFIWVEIPY 395 (472)
T ss_pred --cceeecCcccccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CeeEEecCCcceEEEEEecc
Confidence 233455788888888766666322 12356677899999999999999988733442 1267889999999998652
Q ss_pred ------------HHHHHHhhhcCcEEEcCCC---------------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 365 ------------KAQSDNMTNKWHVYMTKDG---------------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 365 ------------~~~~~~ll~~~gi~v~~~g---------------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+.....+.+.||.+++|. |++++..+.|+++++++++..++++.
T Consensus 396 ~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 396 INFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred cccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 2345555567899998872 99998888999999999999998763
No 111
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=8.6e-32 Score=259.37 Aligned_cols=362 Identities=11% Similarity=0.055 Sum_probs=247.3
Q ss_pred CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeee-cCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283 12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYR-TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
++++++|..+..+..+.+. ..+.++|+|++|+|. |....+. ...+.++..+++..+. ..|++..|.++||+++++
T Consensus 12 r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~-t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~ 89 (460)
T PRK13238 12 RIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSG-TGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKD 89 (460)
T ss_pred eeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCC-chhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHH
Confidence 4556666666666655443 335689999999983 2222211 1246666666554444 789999999999999999
Q ss_pred HhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC------CC
Q 015283 89 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP------KT 162 (410)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~------~~ 162 (410)
++.. +++++ |+||++|+.++ +...+.||| |++++|.|..|...++..|++++.+++.+. +.
T Consensus 90 ~~~~--------~~vv~--t~ggt~A~~~~--~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~ 156 (460)
T PRK13238 90 IFGY--------PYTIP--THQGRAAEQIL--FPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHP 156 (460)
T ss_pred HhCC--------CcEEE--CCCHHHHHHHH--HHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEecccccccccccc
Confidence 9743 45777 99999999998 444588999 999999999999999999999999988531 23
Q ss_pred c--ccChhhHHHHHhcCC-CCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCC--CCCCC-C--CCc
Q 015283 163 V--GLDFEGMIADIKAAP-GGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQG--FASGS-L--DND 233 (410)
Q Consensus 163 ~--~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~--~~~~~-~--~~~ 233 (410)
| .+|++.+++.+.+.+ ++++++++++|+|||| .+++.+++++|.++|++||++||+|+++.. ..+.. . ...
T Consensus 157 f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~ 236 (460)
T PRK13238 157 FKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYK 236 (460)
T ss_pred ccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhcccccc
Confidence 4 499999999997532 3688888899999997 999999999999999999999999997632 21110 0 001
Q ss_pred hhHhHHHhhcCCcEEEEecccccccccCCCcc-----eEEEEeCCchhHHHHHHHHHhhccC-cccCCChhHHHHHHHHh
Q 015283 234 ASSVRLFATRGMELLVAQSYSKNLGLYAERIG-----AMNVVCSSSDLAARVKSQLKRLARP-MYSNPPVHGARIVANVV 307 (410)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G-----~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~l 307 (410)
..++... +..++|++|.+.++|+|+| +++ .++++++++++....-..... ++.+.+...|.+++..|
T Consensus 237 ~~si~~i------~~~~~s~~D~~~~Sg~K~g~~~~GG~i-~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l 309 (460)
T PRK13238 237 DKSIKEI------AREMFSYADGLTMSAKKDAMVNIGGLL-CFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGL 309 (460)
T ss_pred CCCHHHH------hhhhcccCcEEEEecccCCCCcceeEE-EcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhH
Confidence 1111111 2334677777777777763 332 334456555543322111111 23333343355555444
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhc
Q 015283 308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNK 374 (410)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~ 374 (410)
.+. .. +...+...+++++|.+.|. +.| +.+..|.+|+|+|++. +.+++.+|+++
T Consensus 310 ~e~-~~-------~~~~~~~~~~~~~l~~~L~-~~G----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e 376 (460)
T PRK13238 310 YEG-MD-------EDYLAYRIGQVEYLGEGLE-EAG----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLE 376 (460)
T ss_pred HHh-hC-------hHHHHHHHHHHHHHHHHHH-HCC----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHH
Confidence 321 00 1112222335788999998 887 5778899999998754 24568899999
Q ss_pred CcEEEcCCC---------------------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283 375 WHVYMTKDG---------------------RISLAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 375 ~gi~v~~~g---------------------Ris~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
.||.+.|+| |++++. .|.++++.++++|+++.++
T Consensus 377 ~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 377 AGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred cCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 999998852 898874 4899999999999988643
No 112
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=5.7e-31 Score=248.79 Aligned_cols=332 Identities=20% Similarity=0.219 Sum_probs=242.1
Q ss_pred eeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283 37 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 116 (410)
Q Consensus 37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~ 116 (410)
+||+.|.+ .+.. ++.+.....+.........|.+..|..++++++++++...++.....+++++ ++|+++++.
T Consensus 1 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~~ 73 (350)
T cd00609 1 IDLSIGEP----DFPP-PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEALS 73 (350)
T ss_pred CCCCCCCC----CCCC-CHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHHH
Confidence 46777776 2222 3444444433112222366888999999999999999776654445678888 999999998
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh--hhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283 117 LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF--EGMIADIKAAPGGSFILLHGCAHNPTG 194 (410)
Q Consensus 117 ~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~--~~l~~~i~~~~~~~~~ii~~~p~NPtG 194 (410)
.+...+ ..+||+|+++.|+|.++...++..|.+++.+++.+. ...+. +.++.... +++.++++++|+||||
T Consensus 74 ~~~~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG 146 (350)
T cd00609 74 LLLRAL--LNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE--GGFLLDLELLEAAKT---PKTKLLYLNNPNNPTG 146 (350)
T ss_pred HHHHHh--CCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccc--cCCccCHHHHHhhcC---ccceEEEEECCCCCCC
Confidence 874333 568999999999999999999999999999988432 22332 44444433 3566777777999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
.+++.+++++|+++|+++|+++|+|++|+++.+.+... .........+.+++++|++|.++.+|.|+||+++ ++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~---~~ 220 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP---PALALLDAYERVIVLRSFSKTFGLPGLRIGYLIA---PP 220 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc---ccccCcCccCcEEEEeecccccCCcccceEEEec---CH
Confidence 99999999999999999999999999998877542111 1011123445789999999999989999999844 55
Q ss_pred -hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 275 -DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 275 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
++.+.+..... ..+.+++..++.++...++... +..++.+++++++++++.+.|. +.+. .....+
T Consensus 221 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~ 286 (350)
T cd00609 221 EELLERLKKLLP----YTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALK-ELGP---LVVVKP 286 (350)
T ss_pred HHHHHHHHHHHH----hcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHH-hcCC---ccccCC
Confidence 65565544332 3345667777777777777542 3356888889999999999998 7763 121456
Q ss_pred CcceeeecCCC----HHHHHHhhhcCcEEEcCC------C----eEEecCCCcccHHHHHHHHH
Q 015283 354 QIGMFSFTGLN----KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYLADAII 403 (410)
Q Consensus 354 ~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~------g----Ris~~~~~~~~i~~~~~~l~ 403 (410)
.+++++|+.+. ...+.++++++||.+.++ + ||+++.. ++++++++++|+
T Consensus 287 ~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 287 SGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred CccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 77888887652 456777778789999876 2 9999885 899999999886
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.96 E-value=1.2e-27 Score=227.38 Aligned_cols=336 Identities=12% Similarity=0.089 Sum_probs=227.8
Q ss_pred CCCCeeeeeeeeee----cCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 32 TDEKKLNLGVGAYR----TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 32 ~~~~~i~l~~g~~~----~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
.+..++.|.+++++ +..++ ..+.++...++..+. ..|.+..|..+|++++++++.. +++++
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t----~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g~--------~~vv~-- 73 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGT----GAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFGF--------KHIIP-- 73 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCc----HHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHCC--------CeEEE--
Confidence 34678888888772 22222 233333333332333 5699999999999999999733 46777
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC--------CcccChhhHHHHHhcC-C
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAA-P 178 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~-~ 178 (410)
|+||++|+.++ +...+.|||.| +++|.|..+...+...|++++.+++.+.. .+.+|++++++.+.+. .
T Consensus 74 t~~Gt~Al~la--~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~ 150 (431)
T cd00617 74 THQGRGAENIL--FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA 150 (431)
T ss_pred cCCHHHHHHHH--HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC
Confidence 99999999998 44457899987 68999999999999999999999885432 3459999999999863 2
Q ss_pred CCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCCC--CC-----CCCCCchhHhHHHhhcCCcEEEE
Q 015283 179 GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF--AS-----GSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 179 ~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~--~~-----~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
.+++++++++|+||+ |++++.+++++|.++|++||++||+|++.... .+ ++. ...++.. .++.+
T Consensus 151 ~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~--~~~si~e------i~~e~ 222 (431)
T cd00617 151 ENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGY--RDKSIAE------IAREM 222 (431)
T ss_pred CCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccc--cCCCHHH------HHHHh
Confidence 346777788999998 99999999999999999999999999994321 11 001 1111111 23445
Q ss_pred ecccccccccCCC------cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAER------IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 251 ~S~sK~~~~~G~r------~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~ 323 (410)
+|++|.+.++|+| .||+ ++++++++++++..........+.+..+..+.++ +..|.+.. + .+..
T Consensus 223 ~s~sd~~~mS~~K~~~~~~GG~i--~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~------~-~~~l 293 (431)
T cd00617 223 FSYADGCTMSAKKDGLVNIGGFL--ALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV------E-EDYL 293 (431)
T ss_pred hccCCEEEEEeecCCCCccceEE--EeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc------c-HHHH
Confidence 6778877777777 4576 4445567777654321111111112222222222 32443210 0 1223
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCC--------
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKD-------- 382 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~-------- 382 (410)
.++++ +++++.+.|. +.| +.+..|.+++++|++. ...++.+|+++.||.+..-
T Consensus 294 ~~~~~-~r~~l~~~L~-~~G----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~ 367 (431)
T cd00617 294 RHRVE-QVRYLGDRLD-EAG----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD 367 (431)
T ss_pred HHHHH-HHHHHHHHHH-HCC----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccC
Confidence 33444 5588999999 888 5777889999999853 2345778999999986431
Q ss_pred ---C----------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283 383 ---G----------RISLAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 383 ---g----------Ris~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
| |+++.. .|.++++.++++|++++++
T Consensus 368 ~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 368 PNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 1 888764 4899999999999998765
No 114
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.8e-27 Score=231.90 Aligned_cols=334 Identities=13% Similarity=0.014 Sum_probs=217.7
Q ss_pred CCeeeeeeeeeecCCCc-ccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQ-PYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~-~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
..++||++..||....+ +.+++.+.+++.+.... .....|+...++.++++++|+++.. ++.+++ ++
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-------~~ai~~---~~ 169 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-------PAAIVF---GM 169 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-------CcEEEE---CC
Confidence 46899999999866643 33567888888776432 2224477788899999999999753 466776 44
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----------CCC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----------PGG 180 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----------~~~ 180 (410)
|..++..+ +...+.+||.|++++|+|.++...++..|++++.++.. |.+++++.+++. +.+
T Consensus 170 G~~an~~~--i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 170 GYATNSTI--IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence 55555544 33457799999999999999999999999999998862 445555554321 112
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh--hcCCcEEEEeccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLG 258 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~~ 258 (410)
.+++++....|++|. ..++++|+++|++||++||+||+|+....+ .... ++.... ...+.+|+++||||++|
T Consensus 241 k~livve~v~s~~G~---~~~l~~I~~la~~~~~~livDEa~s~g~~G-~~G~--g~~~~~~v~~~~~dI~~~SfSKs~g 314 (489)
T PLN02483 241 KIIVIVEGIYSMEGE---LCKLPEIVAVCKKYKAYVYLDEAHSIGAVG-KTGR--GVCELLGVDPADVDIMMGTFTKSFG 314 (489)
T ss_pred eEEEEECCCCCCCCc---ccCHHHHHHHHHHcCCEEEEECcCccCccC-CCCC--chHHhcCCCcccCcEEEEecchhcc
Confidence 345666667799998 557888888899999999999998743322 1111 111111 12346899999999999
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH--HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
++| ||+++ ++++++.+.......... ...++...+.++ ...+...+. .+...+.+++++++++++.+
T Consensus 315 ~~G---G~i~~---~~~li~~l~~~~~~~~~~-~~~~p~~~~~~~aaL~~l~~~~g----~~~~~~~~~~l~~~~~~l~~ 383 (489)
T PLN02483 315 SCG---GYIAG---SKELIQYLKRTCPAHLYA-TSMSPPAVQQVISAIKVILGEDG----TNRGAQKLAQIRENSNFFRS 383 (489)
T ss_pred cCc---eEEEc---CHHHHHHHHHhCcccccc-CCcCHHHHHHHHHHHHHHHhCcc----ccchHHHHHHHHHHHHHHHH
Confidence 877 99744 788666654432111111 112223232222 222221110 11224557789999999999
Q ss_pred HhhhccCCCCCcccccCCcceeeec--CC---CHHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHH
Q 015283 337 SLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLA 399 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~~~~~~~~~~--~~---~~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~ 399 (410)
.|+ ++|+ .+..+..++.+++ .. ..++..++++ +||.+.+. + ||+++. .+++++++++
T Consensus 384 ~L~-~~G~----~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l 457 (489)
T PLN02483 384 ELQ-KMGF----EVLGDNDSPVMPIMLYNPAKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKAL 457 (489)
T ss_pred HHH-HCCC----cccCCCCCCEEEEEECCHHHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHH
Confidence 999 8873 4443333334332 21 2345677776 59998742 1 888875 5899999999
Q ss_pred HHHHHHhhhc
Q 015283 400 DAIIDSYHNV 409 (410)
Q Consensus 400 ~~l~~~l~~~ 409 (410)
++|+++++.+
T Consensus 458 ~~L~~~~~~~ 467 (489)
T PLN02483 458 EVISEVGDLV 467 (489)
T ss_pred HHHHHHHHHh
Confidence 9999987653
No 115
>PRK10534 L-threonine aldolase; Provisional
Probab=99.96 E-value=4e-27 Score=220.89 Aligned_cols=319 Identities=13% Similarity=0.020 Sum_probs=206.2
Q ss_pred eeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283 37 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 116 (410)
Q Consensus 37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~ 116 (410)
|+|+++.. |.++|.+.+++.+.... ...|.|..+..+|++++++++.. +.+.+ +.||++++.
T Consensus 2 ~~~~~~~~------~~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~g~--------~~~~v--~~~g~~a~~ 63 (333)
T PRK10534 2 IDLRSDTV------TRPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSGK--------EAALF--LPTGTQANL 63 (333)
T ss_pred cccccccC------CCCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHhCC--------CeEEE--eCchHHHHH
Confidence 56776654 33579999998775433 36787888899999999999532 23345 688888877
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcc-hhhh-hhhCC-CCccceeeecCCCcccChhhHHHHHhcCC---CCcEEEEeCCCC
Q 015283 117 LAAALIERYFPGAKVLISSPTWGN-HKNI-FNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAH 190 (410)
Q Consensus 117 ~~~~~~~~~~~gd~Vl~~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~---~~~~~ii~~~p~ 190 (410)
++ +...+.+||+|+++.|+|.. |... ....+ .+++.++. .+++.+|++++++.+.+.. .++++++++||+
T Consensus 64 ~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~ 139 (333)
T PRK10534 64 VA--LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA--AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH 139 (333)
T ss_pred HH--HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC--CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC
Confidence 76 34457799999999888753 3221 23333 56666665 3467899999998885410 146677777654
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||.+++.+++++|+++|++|++++++||+|........+. .........+.++ .||||.++++ +||. +
T Consensus 140 --~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~---~~~~~~~~~~~~~--~s~SK~~~~~---~G~~--~ 207 (333)
T PRK10534 140 --NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGC---ELKEITQYCDSFT--ICLSKGLGTP---VGSL--L 207 (333)
T ss_pred --CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCC---CHHHHHhcCCEEE--EEeEcCCCCc---ccce--E
Confidence 6999999999999999999999999999976221100011 1111111112233 4899998754 6842 3
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
+.++++++.+......... ..+.....+.++...|++. .+..++..+.++++.+.|+ ++| +.+
T Consensus 208 ~~~~~~i~~~~~~~~~~~~--~~~~~~~~~a~~~~~l~~~----------~~~~~~~~~~r~~l~~~L~-~~g----~~~ 270 (333)
T PRK10534 208 VGNRDYIKRARRWRKMTGG--GMRQAGILAAAGLYALKHN----------VARLQEDHDNAAWLAEQLR-EAG----ADV 270 (333)
T ss_pred EcCHHHHHHHHHHHHHhCC--chhhHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHH-hCC----Ccc
Confidence 3488877766553321100 0011223334443333321 1222234456788999998 887 455
Q ss_pred ccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC--eEEec-CCCcccHHHHHHHHHHHhh
Q 015283 351 ILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG--RISLA-GLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 351 ~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g--Ris~~-~~~~~~i~~~~~~l~~~l~ 407 (410)
.++ .++|+|+.+. .+.+.++++++||.+.|+. |++.+ ..+++++++++++|++.+.
T Consensus 271 ~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 271 MRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 656 4788888653 3455667777899999986 88754 3599999999999998764
No 116
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.96 E-value=1.4e-26 Score=222.75 Aligned_cols=331 Identities=11% Similarity=0.066 Sum_probs=217.9
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
+.++|||+.|.++ +++. ++.+.+++.+.+.... ...|....|..++++++++++.+.++. +++|++ ++|
T Consensus 41 g~~~i~l~~~~~~---~~~~-~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--tsG 111 (397)
T PRK06939 41 GKEVINFCANNYL---GLAN-HPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--SSC 111 (397)
T ss_pred CCeEEEeeccCcc---ccCC-CHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--cCh
Confidence 4578999998742 3432 6788888877764421 122333468888888888887766553 356776 555
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHG 187 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~ 187 (410)
++++..+ +...+.+||.|++++|+|+.+...+...|.+++.++. .|++.+++.+++ .+.++++++++
T Consensus 112 -~~a~~~~--~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~ 181 (397)
T PRK06939 112 -FDANGGL--FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATD 181 (397)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEe
Confidence 7777776 3344779999999999999999888888888877654 378888887764 12367777777
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcce
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
+.+||||. .+++++|.++|++||++||+||+|.....+ ..... .. .... ..+.+++++|+||.++ |+|+||
T Consensus 182 ~v~~~~G~---~~~~~~l~~la~~~~~~li~De~~~~g~~~-~~~~~-~~-~~~~~~~~~~i~~~S~sK~~~--g~r~G~ 253 (397)
T PRK06939 182 GVFSMDGD---IAPLPEICDLADKYDALVMVDDSHAVGFVG-ENGRG-TV-EHFGVMDRVDIITGTLGKALG--GASGGY 253 (397)
T ss_pred cCcCCCCC---cCCHHHHHHHHHHhCCEEEEECcccccCcC-CCCCC-HH-HHcCCCCCCcEEEEECHHHhC--ccCceE
Confidence 78999998 567889999999999999999998532211 11111 11 1111 1235799999999984 569999
Q ss_pred EEEEeCCchhHHHHHHHHHhhccCcccCC-ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 267 MNVVCSSSDLAARVKSQLKRLARPMYSNP-PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
+++ ++++++.+...... ..+.++ +...+.++...++.. +..++.+++++++++++.+.|. +.+
T Consensus 254 v~~---~~~~~~~l~~~~~~---~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~~-- 317 (397)
T PRK06939 254 TAG---RKEVIDWLRQRSRP---YLFSNSLAPAIVAASIKVLELL-------EESDELRDRLWENARYFREGMT-AAG-- 317 (397)
T ss_pred EEe---CHHHHHHHHHhCcc---ccccCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHH-HcC--
Confidence 854 77766665432111 112222 222222222222210 1124667888999999999998 776
Q ss_pred CCcccccCCcceeeec-CC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 346 KDWSFILRQIGMFSFT-GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 346 ~~~~~~~~~~~~~~~~-~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+....+.++++.+. +. ..+++.+++++ ||.+.++ + |++++. .+++++++++++|+++++++
T Consensus 318 --~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 318 --FTLGPGEHPIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred --CCcCCCCCCEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 34444555554332 21 23456777765 9988642 1 888764 58999999999999998764
No 117
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=2.6e-26 Score=220.41 Aligned_cols=326 Identities=10% Similarity=0.078 Sum_probs=213.0
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCc---cc----HHHHHHHHHHhcCCCCCcccCCceEE
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---GL----AAFNKVTAELLFGADNSVLKEQRVAT 105 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~----~~lr~aia~~~~~~~~~~~~~~~i~~ 105 (410)
+.++|||+.|+|+ +.+. +|.+.+++.+++.... ..|++.. |. .++++++++++.. +++++
T Consensus 37 g~~~i~~~~~~~l---g~~~-~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g~--------~~~ii 103 (393)
T TIGR01822 37 GREVLNFCANNYL---GLSS-HPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLGT--------EDTIL 103 (393)
T ss_pred CceEEEeeCCCcc---ccCC-CHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhCC--------CcEEE
Confidence 4578999999875 3332 5677777766664311 2444433 64 7899999999643 34555
Q ss_pred EecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcE
Q 015283 106 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSF 182 (410)
Q Consensus 106 ~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~ 182 (410)
++||++|+..+ +...+.+||.|++++|.|+.+...++..+.+...++ ..|++++++.+++. +.+++
T Consensus 104 --~~~~~~a~~~~--~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 104 --YASCFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred --ECchHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCce
Confidence 68889998877 344478999999999999999988887776664433 26889998888752 22677
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccC
Q 015283 183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYA 261 (410)
Q Consensus 183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G 261 (410)
++++++++||||.+.+ +++|+++|++||+++|+||+|.....+ .... +.....+ ..+.+++++|+||.++ |
T Consensus 173 ~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~-~~~~--~~~~~~~~~~~~di~~~s~sK~l~--g 244 (393)
T TIGR01822 173 LIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLG-PTGR--GSHELCGVMGRVDIITGTLGKALG--G 244 (393)
T ss_pred EEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcC-CCCC--chHHhcCCCCCCeEEEEEChHHhh--C
Confidence 8888889999999654 678888899999999999998532221 1111 1111121 1245799999999875 7
Q ss_pred CCcceEEEEeCCchhHHHHHHHHHhhccCcccC-CChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283 262 ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSN-PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340 (410)
Q Consensus 262 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 340 (410)
+|+||+++ ++++++.+....... ..++ .+...+.++...++. .+..++.+++++++++++.+.|+
T Consensus 245 ~r~G~~~~---~~~~~~~l~~~~~~~---~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~l~~~L~- 310 (393)
T TIGR01822 245 ASGGFTTA---RKEVVELLRQRSRPY---LFSNSLPPAVVGASIKVLEM-------LEASNELRDRLWANTRYFRERME- 310 (393)
T ss_pred CCcEEEEe---CHHHHHHHHHhCccc---eecCCCCHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHH-
Confidence 89999754 778666654421111 1222 223222223323211 11235677889999999999998
Q ss_pred ccCCCCCcccccCCcceeeec-C--C-CHHHHHHhhhcCcEEEcC-------CC----eEEecC-CCcccHHHHHHHHHH
Q 015283 341 KDKSGKDWSFILRQIGMFSFT-G--L-NKAQSDNMTNKWHVYMTK-------DG----RISLAG-LSLAKCEYLADAIID 404 (410)
Q Consensus 341 ~~g~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~ll~~~gi~v~~-------~g----Ris~~~-~~~~~i~~~~~~l~~ 404 (410)
+.|+ .+..+.+.++.+. . . ..++...|++ +||.+.. .+ ||+++. .+++++++++++|++
T Consensus 311 ~~g~----~~~~~~~~~~~i~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 311 AAGF----DIKPADHPIIPVMLYDAVLAQRFARRLLE-EGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred HcCC----CCCCCCCCEEEEEeCCHHHHHHHHHHHHH-CCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 7763 4333333333221 1 1 2345666666 4998862 12 777654 389999999999999
Q ss_pred Hhhhc
Q 015283 405 SYHNV 409 (410)
Q Consensus 405 ~l~~~ 409 (410)
+++++
T Consensus 386 ~~~~~ 390 (393)
T TIGR01822 386 IGREL 390 (393)
T ss_pred HHHHh
Confidence 87654
No 118
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=6.6e-27 Score=227.49 Aligned_cols=328 Identities=12% Similarity=0.067 Sum_probs=220.0
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
+.+++||+.|.+++..+ +|.+++++.+++.. +. ...|.+..+..++++++++++.. ++.|++
T Consensus 108 G~~~id~~s~~~lgl~~----~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-------~~~i~~- 175 (481)
T PLN02822 108 GKDVVNFASANYLGLIG----NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-------PDSILY- 175 (481)
T ss_pred CceEEEeECCCcCCCCC----CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence 35689999998754443 57777777776643 21 12467778899999999999742 467888
Q ss_pred ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---C---CCC
Q 015283 107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---A---PGG 180 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~---~~~ 180 (410)
++|++ ++..+ +.....+||.|++...+|..+...+...|.+++.+++. |.+.++..+.+ . +++
T Consensus 176 -s~G~~-a~~sa--i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~ 244 (481)
T PLN02822 176 -SYGLS-TIFSV--IPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKK 244 (481)
T ss_pred -CCHHH-HHHHH--HHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCC
Confidence 66666 55554 33346699999988888888877788888888888774 33344333321 1 122
Q ss_pred -cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH-hhcCCcEEEEeccccccc
Q 015283 181 -SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 181 -~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~ 258 (410)
++++++.+++|+||.+.+ +++|+++|++||+++|+||+|+...++.... . ....+ ......+++++||||.+|
T Consensus 245 ~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~-G-~~e~~~v~~~~~dii~~s~sKalg 319 (481)
T PLN02822 245 LRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGR-G-LSEHFGVPIEKIDIITAAMGHALA 319 (481)
T ss_pred CcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC-C-hHHHcCCCCCCCeEEEecchhhhh
Confidence 367888889999999888 6788888999999999999998555432111 1 11111 111246789999999999
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
++| ||+++ ++++++.+... ....+++ +.|...+.++...|+.. +...+.+++++++++++.+.
T Consensus 320 ~~G---G~i~g---~~~ii~~~~~~---~~~~~fsa~lPp~~~~Aa~~aL~~l-------~~~~~~~~~l~~~~~~l~~~ 383 (481)
T PLN02822 320 TEG---GFCTG---SARVVDHQRLS---SSGYVFSASLPPYLASAAITAIDVL-------EDNPSVLAKLKENIALLHKG 383 (481)
T ss_pred hCC---eEEEc---CHHHHHHHHhc---CCceeeccccCHHHHHHHHHHHHHH-------HhCHHHHHHHHHHHHHHHHH
Confidence 888 88644 77765554321 1111233 33444445554444211 11246778899999999999
Q ss_pred hhhcc-CCCCCcccccCCcceeeecCCC-------------HHHHHHhhhcCcEEEcCC------------C-eEEecC-
Q 015283 338 LSAKD-KSGKDWSFILRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKD------------G-RISLAG- 389 (410)
Q Consensus 338 l~~~~-g~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ll~~~gi~v~~~------------g-Ris~~~- 389 (410)
|+ +. | +.+..+..++++++.+. .++++++++++||.+.++ + ||+++.
T Consensus 384 L~-~~~g----~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~ 458 (481)
T PLN02822 384 LS-DIPG----LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAG 458 (481)
T ss_pred HH-hcCC----cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCC
Confidence 98 75 4 45555556666665331 245778886679999854 1 887664
Q ss_pred CCcccHHHHHHHHHHHhhhc
Q 015283 390 LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 390 ~~~~~i~~~~~~l~~~l~~~ 409 (410)
.++++|++++++|++++.++
T Consensus 459 ~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 459 HTESDILKASESLKRVAASV 478 (481)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 49999999999999988763
No 119
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=8e-27 Score=224.14 Aligned_cols=325 Identities=14% Similarity=0.090 Sum_probs=212.9
Q ss_pred eeecCCCcccccHHHHHHHHHhhccC-CCccCcC-------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 43 AYRTEELQPYVLDVVKKAENLMLERG-ENKEYLP-------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 43 ~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~-------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
.|+|..+..++|+.+.+++.+.+... ....+.+ ....+++|+.+++++... ++++|++ |+|+|++
T Consensus 18 iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~--t~g~t~~ 90 (398)
T TIGR03392 18 VYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAP-----DAENIVW--TRGTTES 90 (398)
T ss_pred EEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCChHHH
Confidence 45555566667899999988776321 1111211 123567999999997542 2578999 9999999
Q ss_pred HHHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283 115 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188 (410)
Q Consensus 115 ~~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~ 188 (410)
+.+++..+. .+.+||+|++++|+|++ +...++..|++++.++.. .++.+|++.+++.+.+ +++++++++
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~---~t~lv~i~~ 165 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG--ADLLPDIRQLPELLTP---RTRILALGQ 165 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHHhcc---CceEEEEEC
Confidence 999844332 24689999999999866 445567889999999873 3466899999998875 678888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
|+||||.+.+ +++|+++|+++|+++++|++|...... . .+ ...+.++++.|.+|.+|++| +||++
T Consensus 166 ~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~---~---~~----~~~~~d~~~~s~~K~~gp~G--~G~l~ 230 (398)
T TIGR03392 166 MSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP---P---DV----QALDIDFYAFSGHKLYGPTG--IGVLY 230 (398)
T ss_pred ccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC---C---Ch----hhcCCCEEEEecccccCCCc--eEEEE
Confidence 9999999765 567788899999999999997543321 1 11 11234677889999998766 79986
Q ss_pred EEeCCchhHHHHHHHHHhh-----------------ccCcccCCChhHHH---HHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 269 VVCSSSDLAARVKSQLKRL-----------------ARPMYSNPPVHGAR---IVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~---~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
+ +++.++++....... .+...++++..+.. ++...+.+. ..++++++.+
T Consensus 231 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~--------g~~~i~~~~~ 299 (398)
T TIGR03392 231 G---KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDI--------DIAAAEAWSV 299 (398)
T ss_pred E---cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHh--------CHHHHHHHHH
Confidence 5 677555542211000 00001122222222 223333221 2346677788
Q ss_pred HHHHHHHHHhhhccCCCCCccccc-CCcceeee--cCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFIL-RQIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG 389 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~ 389 (410)
+.++++.+.|+ ++.. +.... +..+++.| .+.+.+.+.+.++++||.+.+| | |+|+..
T Consensus 300 ~l~~~l~~~l~-~l~g---~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~ 375 (398)
T TIGR03392 300 SLADLAEERLA-QLPG---FRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAP 375 (398)
T ss_pred HHHHHHHHHHh-cCCC---eEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeec
Confidence 88888998887 6631 33332 33333332 2444444444456679998753 2 998764
Q ss_pred -CCcccHHHHHHHHHHHhhhc
Q 015283 390 -LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 390 -~~~~~i~~~~~~l~~~l~~~ 409 (410)
.|++|++++++.|+++++.+
T Consensus 376 ~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 376 YNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred cCCHHHHHHHHHHHHHHHHHh
Confidence 38999999999999988754
No 120
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=7e-27 Score=224.74 Aligned_cols=328 Identities=16% Similarity=0.132 Sum_probs=214.8
Q ss_pred eeecCCCcccccHHHHHHHHHhhccCC-C-c--cCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 43 AYRTEELQPYVLDVVKKAENLMLERGE-N-K--EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~--~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
.|+|..+.+++++.+.+++.+.+.... . + .+. .....+++|+.+++++... ++++|++ ++|+|++
T Consensus 21 ~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~--~~~~t~~ 93 (401)
T PRK10874 21 VYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAP-----DAKNIVW--TRGTTES 93 (401)
T ss_pred EEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE--ECCHHHH
Confidence 455566666778899999887764311 0 0 110 1223678899999987542 2688999 9999999
Q ss_pred HHHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283 115 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188 (410)
Q Consensus 115 ~~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~ 188 (410)
+.+++..+. .+.+||+|++++|.|++ +...++..|++++.++. ++++.+|++++++.+++ +++++++++
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~i~~---~t~lv~i~~ 168 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPL--GADRLPDVDLLPELITP---RTRILALGQ 168 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEec--CCCCcCCHHHHHHhcCc---CcEEEEEeC
Confidence 999854442 24699999999999865 44556778999999987 34567899999999865 678888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
|+||||.+.+ +++|+++|+++|+++++|++|...... . .+ ...+.++++.|++|.+|++| +||++
T Consensus 169 ~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~-~-----~~----~~~~~d~~~~s~~K~~gp~G--~G~l~ 233 (401)
T PRK10874 169 MSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP-A-----DV----QALDIDFYAFSGHKLYGPTG--IGVLY 233 (401)
T ss_pred CcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc-C-----Cc----hhcCCCEEEEecccccCCCc--cEEEE
Confidence 9999999775 557777799999999999997532211 1 11 12235688899999998777 48886
Q ss_pred EEeCCchhHHHHHHHHHhh-----------------ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 269 VVCSSSDLAARVKSQLKRL-----------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
+ +++.++++....... .+...++++..++.++...++ +.. .....+.+++.++.+
T Consensus 234 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~---~l~--~~g~~~~~~~~~~l~ 305 (401)
T PRK10874 234 G---KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALE---WLA--DIDINQAESWSRSLA 305 (401)
T ss_pred E---chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHH---HHH--HhCHHHHHHHHHHHH
Confidence 5 777655543211000 000111233233333333322 100 112345677888888
Q ss_pred HHHHHHhhhccCCCCCccccc-CCcceeee--cCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC-CC
Q 015283 332 QKLFDSLSAKDKSGKDWSFIL-RQIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG-LS 391 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~-~~ 391 (410)
+++.+.|+ ++.. +.... +..+++.| .+++.+.+.+.|+++||.+.++ | |+|+.. .|
T Consensus 306 ~~l~~~l~-~~~g---~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt 381 (401)
T PRK10874 306 TLAEDALA-KLPG---FRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT 381 (401)
T ss_pred HHHHHHHh-cCCC---EEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC
Confidence 99999888 7621 33332 33333332 2344455555556679998762 2 999774 38
Q ss_pred cccHHHHHHHHHHHhhhc
Q 015283 392 LAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 392 ~~~i~~~~~~l~~~l~~~ 409 (410)
++|++++++.|+++++.+
T Consensus 382 ~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 382 QSDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 899999999999987653
No 121
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.9e-27 Score=198.69 Aligned_cols=276 Identities=18% Similarity=0.181 Sum_probs=210.0
Q ss_pred cccCCceEEEecCChhhHHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh
Q 015283 97 VLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 175 (410)
Q Consensus 97 ~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 175 (410)
+.++++|++ -.|+.+.+++++++. +.|| ++|+...|+|..|.-.+...++.++.+|+. .+|++|.+.+.+.++
T Consensus 83 pLt~dnic~--GvGsDE~ID~iiR~~--c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~--pdF~lnvdai~evl~ 156 (375)
T KOG0633|consen 83 PLTSDNICV--GVGSDELIDLIIRCV--CDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLN--PDFSLNVDAIAEVLE 156 (375)
T ss_pred CCCccceEE--ecCcHHHHHHHHhhe--ecCCccceeecCCcceeEEEEeecCCceEEEecCC--CCccccHHHHHHHHh
Confidence 356899999 777888888864333 5599 999999999999988888889999999984 478999999988887
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283 176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 255 (410)
Q Consensus 176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 255 (410)
. ....++++.++|+||||..++.+++++|.+-=. |.++++||+|-+|.... +-..+...+++.+++.++||
T Consensus 157 ~-ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~------S~~~lV~kYpNLivlqTlSK 227 (375)
T KOG0633|consen 157 L-DSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVE------SRMKLVKKYPNLIVLQTLSK 227 (375)
T ss_pred c-cccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeecccc------ccchHhHhCCceeehhhhhh
Confidence 6 236778888999999999999999999864333 78999999999998421 22255678899999999999
Q ss_pred cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
.||++|+|+||..+ +..+++.+.... . ..+.+..+..+|..++++... +.++..++.+.+.+.+|.
T Consensus 228 sfGLAGiRvG~~~~---~~~ia~iln~~K----a--PYNiS~~~s~~AL~Als~~n~-----kkme~~rdaiv~er~RL~ 293 (375)
T KOG0633|consen 228 SFGLAGIRVGYGAF---PLSIAEILNRAK----A--PYNISVAGSVAALAALSDSNG-----KKMEDVRDAIVRERERLF 293 (375)
T ss_pred hcCcceeEeecccc---cHHHHHHHHhcc----C--CccccchhHHHHHHhcCcccc-----hHHHHHHHHHHHHHHHHH
Confidence 99999999999766 777555544422 1 235566666778888886553 456888999999999999
Q ss_pred HHhhhccCCCCCcccccCCcceeeecCC-------CHHHHHHhhhcCcEEEcCC-------C--eEEecCCCcccHHHHH
Q 015283 336 DSLSAKDKSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLA 399 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~~i~~~~ 399 (410)
+.|. ++.... ++..+..+.|+.+.. ......+++.+.||.|+-- | ||+++ ++|+-.-++
T Consensus 294 keLt-~v~~~~--~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG--t~EentvL~ 368 (375)
T KOG0633|consen 294 KELT-EVPFLN--DYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG--TPEENTVLM 368 (375)
T ss_pred HHhh-cCcccc--CCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC--CcccchHHH
Confidence 9998 876422 345555566766533 2344555656689998643 2 99985 567778899
Q ss_pred HHHHHHh
Q 015283 400 DAIIDSY 406 (410)
Q Consensus 400 ~~l~~~l 406 (410)
+.+++++
T Consensus 369 k~~K~~l 375 (375)
T KOG0633|consen 369 KCLKQFL 375 (375)
T ss_pred HHHHhhC
Confidence 9888764
No 122
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.95 E-value=3e-26 Score=217.51 Aligned_cols=320 Identities=13% Similarity=0.039 Sum_probs=208.2
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-CccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
+..+|||+.|.| .|.+. ++.+.+++.+++.. +. ...|.. .....++++++++++.. ++++++
T Consensus 15 g~~~id~~~~~~---~g~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~- 82 (360)
T TIGR00858 15 GRRLLNFSSNDY---LGLAS-HPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-------EAALLF- 82 (360)
T ss_pred CceEEecccCCc---ccCCC-CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence 457899999864 24322 57888888777643 11 011211 22355688888888632 456766
Q ss_pred ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEE
Q 015283 107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILL 185 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii 185 (410)
++| ++++..+ +...+.+||.|++++|+|..+...++..|.+++.++. +|++.+++.+++.. +++++++
T Consensus 83 -~~G-~~~~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 83 -SSG-YLANVGV--ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred -Cch-HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence 544 5555554 2334679999999999999999988888988877764 58889998887532 3467888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh--hcCCcEEEEecccccccccCCC
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLGLYAER 263 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~~~~G~r 263 (410)
+++++||||... ++++|.++|+++|+++|+||+|..+.++. ... +..... ...+++++++|+||.++++|
T Consensus 152 ~~~~~~~~G~~~---~~~~i~~l~~~~~~~li~De~~~~~~~~~-~~~--~~~~~~~~~~~~~~i~i~s~sK~~~~~g-- 223 (360)
T TIGR00858 152 TDGVFSMDGDIA---PLPQLVALAERYGAWLMVDDAHGTGVLGE-DGR--GTLEHFGLKPEPVDIQVGTLSKALGSYG-- 223 (360)
T ss_pred EeCCccCCCCCc---CHHHHHHHHHHcCcEEEEECcccccCcCC-CCC--chHHhcCCCccCCcEEEEechhhhhccC--
Confidence 899999999854 46778888999999999999987654431 111 111111 12357899999999998766
Q ss_pred cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 264 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 264 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
||+++ ++++.+.+........ ....++...+.++...++. .+..++.+++++++++++.+.|+ +++
T Consensus 224 -G~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~l~~~L~-~~~ 289 (360)
T TIGR00858 224 -AYVAG---SQALIDYLINRARTLI--FSTALPPAVAAAALAALEL-------IQEEPWRREKLLALIARLRAGLE-ALG 289 (360)
T ss_pred -cEEEc---CHHHHHHHHHhCccce--ecCCCCHHHHHHHHHHHHH-------HhhCHHHHHHHHHHHHHHHHHHH-HcC
Confidence 89744 7775555433211110 1112333333333333321 11124667899999999999998 876
Q ss_pred CCCCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHH
Q 015283 344 SGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAII 403 (410)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~ 403 (410)
+... +..+.++|+.+. .++.+++++ +||.+.++ + |+++.. .+++++++++++|+
T Consensus 290 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 290 ----FTLM-PSCTPIVPVIIGDNASALALAEELQQ-QGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred ----CccC-CCCCCEEEEEeCCHHHHHHHHHHHHH-CCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 3444 334567666442 234556654 69999641 2 999874 48899999998874
No 123
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.95 E-value=5.8e-26 Score=216.99 Aligned_cols=332 Identities=13% Similarity=0.060 Sum_probs=208.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...|||..|...+..|+. +|.+.+++.+++.... ...| +.....++.+.+++++ + .+++++ ++||
T Consensus 27 ~~~id~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~~~~--~~sg 93 (379)
T TIGR00707 27 KEYLDFVAGIAVNSLGHA--HPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS----G----ADRVFF--CNSG 93 (379)
T ss_pred CEEEEcCcchhhccCCCC--CHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCCc
Confidence 468999997543344543 5888888887765421 1234 3444566666676664 2 247888 8999
Q ss_pred hhHHHHHHHHHHHhC-----CCCEEEEcCCCCcchhhhhhhCCCCccc----eeeecCCCcc--cChhhHHHHHhcCCCC
Q 015283 112 TGSLRLAAALIERYF-----PGAKVLISSPTWGNHKNIFNDARVPWSE----YRYYDPKTVG--LDFEGMIADIKAAPGG 180 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~--~d~~~l~~~i~~~~~~ 180 (410)
++++..+.+++..+. +||+|++++|+|..+.......+..... .++..+..+. .|++.+++.+.+ +
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~ 170 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD---E 170 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh---C
Confidence 999999876654432 3799999999998876655544433211 2221111111 178899888865 5
Q ss_pred cEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
+.++++++++||+|.. ++.+++++|.++|+++++++|+||+|.+++..+ ....... ....++++ +|||.++
T Consensus 171 ~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g---~~~~~~~-~~~~~d~~---t~sK~~~- 242 (379)
T TIGR00707 171 TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG---KFFAYEH-YGIEPDII---TLAKGLG- 242 (379)
T ss_pred eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhhHHh-cCCCCCEE---EEccccc-
Confidence 6666666667777764 689999999999999999999999998876431 1111111 12223433 7899999
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+|+|+||++. ++++++.+ .........+.+..++.++...|+.-+ ....+++++++++.+.+.|.
T Consensus 243 ~G~riG~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~aa~aaL~~~~--------~~~~~~~~~~~~~~~~~~l~ 307 (379)
T TIGR00707 243 GGVPIGATLA---KEEVAEAF----TPGDHGSTFGGNPLACAAALAVLEVIE--------KERLLENVKEKGDYFKERLE 307 (379)
T ss_pred CCcccEEEEE---cHHHHhhh----cCCCCCCCCCCCHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHHHHH
Confidence 9999999854 67754443 322222222456666666665543110 02344556666666666665
Q ss_pred hccCCCCCcccccCCcceeeecCC--CHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHh
Q 015283 340 AKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 340 ~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
+++....+... +..|.|+|+.+ +...+.+.+.+.||.+.|++ ||+++. .+++++++++++|++++
T Consensus 308 -~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 308 -ELGKNYPNKEV-RGKGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred -HHHhhCCCCcc-ccCceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 54321112112 23466666644 33344444455799999865 998653 58999999999998864
No 124
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=5.4e-26 Score=218.44 Aligned_cols=334 Identities=13% Similarity=0.027 Sum_probs=210.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|.+-...|+. .|.+.+++.+.+.... +.......++++++++++....+ .+++++ ++||++
T Consensus 39 ~~~iD~~~g~~~~~lG~~--~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~--~~gg~e 107 (396)
T PRK02627 39 KEYLDFLAGIAVNNLGHC--HPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG----MDKVFF--CNSGAE 107 (396)
T ss_pred CEEEECCccHHhccCCCC--CHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC----CCEEEE--CCCcHH
Confidence 467899888763344543 4788888887765421 11111234677777777765543 478999 999999
Q ss_pred HHHHHHHHHHHhCC-----CCEEEEcCCCCcchhhhhhhCCCCc-c---ceeeecCCCc----ccChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYFP-----GAKVLISSPTWGNHKNIFNDARVPW-S---EYRYYDPKTV----GLDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~~-----gd~Vl~~~p~y~~~~~~~~~~g~~~-~---~v~~~~~~~~----~~d~~~l~~~i~~~~~~ 180 (410)
|++.+.+++..... .++|++..++|.++.......+... . ..++. .++ ..|++.+++.+.+ +
T Consensus 108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~---~ 182 (396)
T PRK02627 108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITD---K 182 (396)
T ss_pred HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCC---C
Confidence 99999776644332 1789999999987754443332211 1 11111 111 1288899988853 6
Q ss_pred cEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
+.++++.+++|||| .+++.+.+++|.++|++||+++|+||+|.+|+..+ ..+.... .+..+++ .+|||.++
T Consensus 183 ~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g---~~~~~~~-~~~~pdi---~t~sK~~~- 254 (396)
T PRK02627 183 TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG---KLFAYQH-YGIEPDI---MTLAKGLG- 254 (396)
T ss_pred eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC---ceeeehh-cCCCCCE---EEEcchhh-
Confidence 77777788899999 68899999999999999999999999999886432 1122111 1222233 37999999
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+|+|+||++. ++++++.+ .......+.+.+.+++.++...|+..+. ++..++++++.+.+.+.|.
T Consensus 255 ~G~rig~~~~---~~~~~~~~----~~~~~~~t~~~~~~~~~aa~~~l~~~~~--------~~~~~~~~~~~~~~~~~l~ 319 (396)
T PRK02627 255 GGVPIGAVLA---KEKVADVF----TPGDHGSTFGGNPLACAAALAVIEIIEE--------EGLLENAAEVGEYLRAKLR 319 (396)
T ss_pred CCcccEEEEE---cHHHHhcc----CCCCCCCCCCCCHHHHHHHHHHHHHHhh--------ccHHHHHHHHHHHHHHHHH
Confidence 8999999855 66644443 2222222334566677777666542211 1223333444444444443
Q ss_pred hccCCC-CCcccccCCcceeeecCC--C-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 340 AKDKSG-KDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 340 ~~~g~~-~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
++... ..+... +..|.+.|+.+ + .+++.+++++ ||.+.|++ ||+++ ..+++++++++++|+++++++
T Consensus 320 -~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~l~~~-Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 320 -ELLEKYPGIKEV-RGLGLMIGIELDRPAAEIVKKALEK-GLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred -HHHHhCCCeeee-ccCcEEEEEEecCcHHHHHHHHHHC-CeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 32100 001222 23466777754 2 3456777765 99999865 88764 358999999999999998764
No 125
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=6e-26 Score=217.32 Aligned_cols=331 Identities=14% Similarity=0.121 Sum_probs=216.9
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
+.+++||+.|.++ +++. +|.+.+++.+++.. . ....|....|..++++++++++....+. ++.+++ ++|
T Consensus 32 g~~~id~~~~~~~---g~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~sG 102 (385)
T TIGR01825 32 GKEVINLSSNNYL---GFAD-HPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QSG 102 (385)
T ss_pred CceEEEeeccCcc---CCCC-CHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--CcH
Confidence 4678999988642 4433 67888887777643 2 1245777889999999999998766553 345665 544
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEeCCC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCA 189 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p 189 (410)
++++..+ +...+.+||.|++++|+|+.+...+...|.++..++ .+|++++++.+++.. +++++++++++
T Consensus 103 -~~a~~~a--~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v 172 (385)
T TIGR01825 103 -FNTNQGV--LSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGV 172 (385)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecC
Confidence 6666665 334477999999999999999877777777765543 267888888776532 36778888889
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
+||||.+.+ +++|.++|++||+++|+||+|..+.++.. ... ....+.-..+.++++.||||.++++| ||++.
T Consensus 173 ~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~-~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~ 244 (385)
T TIGR01825 173 FSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEA-GRG-TVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAG 244 (385)
T ss_pred CcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCC-CCc-cHhhcCCCcCCcEEEEeccHHhhcCC---CEEec
Confidence 999999665 67788889999999999999976654311 110 11111112457899999999998665 89643
Q ss_pred EeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283 270 VCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 348 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 348 (410)
++++++.+....... ... ..+...+.++...++.. .+ ..+..++++++++++.+.|+ ++| +
T Consensus 245 ---~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~al~~~------~~-~~~~~~~~~~~~~~l~~~L~-~~g----~ 306 (385)
T TIGR01825 245 ---HKELIEYLKNRARPF---LFSTAQPPAVVAALAAAVDEL------QR-SPELMERLWDNTRFFKAGLG-KLG----Y 306 (385)
T ss_pred ---CHHHHHHHHHhCccc---cccCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH-HcC----C
Confidence 777666654321111 112 22333344443333211 00 12345667778899999998 776 3
Q ss_pred ccccCCcceeeec-CC---CHHHHHHhhhcCcEEEcCC-------C----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 349 SFILRQIGMFSFT-GL---NKAQSDNMTNKWHVYMTKD-------G----RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 349 ~~~~~~~~~~~~~-~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
++..+.+.++.+. +. ..++...++++ ||.+.+. | |++++ ..+++++++++++|+++++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 307 DTGGSETPITPVVIGDEKAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 4444544433222 21 23456777775 9988431 2 77654 359999999999999998764
No 126
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=9.3e-26 Score=210.69 Aligned_cols=292 Identities=15% Similarity=0.111 Sum_probs=197.3
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 133 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~ 133 (410)
.|.++++..+.+... . ++..-+.++++.+++++.. +++++++ ++||++++..+ +...+.+||.|++
T Consensus 35 ~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~g~------~~e~ilv--~~gg~~a~~~~--~~al~~~gd~Vli 100 (346)
T TIGR03576 35 GFKIDEEDLELLETY--V--GPAIFEEKVQELGREHLGG------PEEKILV--FNRTSSAILAT--ILALEPPGRKVVH 100 (346)
T ss_pred ChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHcCC------CcceEEE--ECCHHHHHHHH--HHHhCCCCCEEEE
Confidence 477777766655331 1 1223456777777777532 2688988 99999999998 4445779999997
Q ss_pred c---CCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 015283 134 S---SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 210 (410)
Q Consensus 134 ~---~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~ 210 (410)
+ .|+|..|...++..|+++..+ .+++.++. . +++.++++ ++.+++|.+++.+++++|+++|+
T Consensus 101 ~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~----~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~ 165 (346)
T TIGR03576 101 YLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I----DGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAK 165 (346)
T ss_pred CCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C----cCceEEEE-ECCCCCCcccCHHHHHHHHHHHH
Confidence 5 478888888888888765322 13444322 1 23455554 35699999999999999999999
Q ss_pred HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283 211 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP 290 (410)
Q Consensus 211 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~ 290 (410)
++|+++|+||+|..+..+..+.. .. ... ...+++.|+|| +++|+|+||+++ ++++++.+..... .
T Consensus 166 ~~~~~livDEAy~~~~~~~~~~~--~~---~~~-~~divv~s~SK--alaG~r~G~v~~---~~~li~~l~~~~~----~ 230 (346)
T TIGR03576 166 SKEAIVLVDDASGARVRRLYGQP--PA---LDL-GADLVVTSTDK--LMDGPRGGLLAG---RKELVDKIKSVGE----Q 230 (346)
T ss_pred HcCCEEEEECCccccccccCCCC--CH---HHc-CCcEEEeccch--hccccceEEEEe---CHHHHHHHHHhhc----C
Confidence 99999999999987653211111 11 111 23467889999 568999999755 7786666554433 2
Q ss_pred cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----HH
Q 015283 291 MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KA 366 (410)
Q Consensus 291 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~ 366 (410)
...+.+...+.++...|+... .+..++.++++++++.+.+. .++ +.++..+ |+|+.+. .+
T Consensus 231 ~~~s~~~~~~~aa~~aL~~~~--------~~~~~~~l~~r~~~~~~~l~-~~~------~~~~~~~-f~~~~~~~~~~~~ 294 (346)
T TIGR03576 231 FGLEAQAPLLAAVVRALEEFE--------LSRIRDAFKRKEEVYLRLFD-KLN------VERTPTG-FVIKGVEEEKLIE 294 (346)
T ss_pred cccCccHHHHHHHHHHHhhcc--------HHHHHHHHHHHHHHHHHHHH-hCC------CCcCCCe-EEEEeCCCCCHHH
Confidence 222345556666666665421 13557788888887777776 443 2333434 7888663 36
Q ss_pred HHHHhhhcCcEEEcCC-------C--eEEecCCCcc---cHHHHHHHHHHHh
Q 015283 367 QSDNMTNKWHVYMTKD-------G--RISLAGLSLA---KCEYLADAIIDSY 406 (410)
Q Consensus 367 ~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~---~i~~~~~~l~~~l 406 (410)
++.++++++||.++|+ + |||++. +++ +++.+++.|++.+
T Consensus 295 ~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 295 IGLDLLRNYGIITITAVGMPGASKTLRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHHHHHhCCEEEeCCcccCCCCCeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 7888998899999984 2 999986 444 7999999998865
No 127
>PLN02721 threonine aldolase
Probab=99.95 E-value=1.6e-25 Score=212.01 Aligned_cols=324 Identities=14% Similarity=0.093 Sum_probs=203.3
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
.+++|+.|.+ .. +++.+.+++.+.........| .....++++++++++... .+++ +.+|+++
T Consensus 6 ~~~~~~~~~~----~~--~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~--------~~~~--~~~Gs~a 67 (353)
T PLN02721 6 RVVDLRSDTV----TK--PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFGKE--------AALF--VPSGTMG 67 (353)
T ss_pred hhhhhhcccc----cC--CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhCCc--------eeEE--ecCccHH
Confidence 4688998887 22 368888888764111111333 333789999999997432 3455 6777877
Q ss_pred HHHHHHHHHHhC-CCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEe
Q 015283 115 LRLAAALIERYF-PGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLH 186 (410)
Q Consensus 115 ~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~ 186 (410)
+..+ +...+. +||+|++++|+|..... .+...|.+++.++. .+++.+|++.+++.+++. .++++++++
T Consensus 68 ~~~~--l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l 143 (353)
T PLN02721 68 NLIS--VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKN--NEDGTMDLDAIEAAIRPKGDDHFPTTRLICL 143 (353)
T ss_pred HHHH--HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCC--CcCCCcCHHHHHHHHHhccCCCCCcceEEEE
Confidence 6654 333455 99999999999864443 56678999988886 345678999999999742 024556665
Q ss_pred CC-CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283 187 GC-AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 187 ~~-p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 265 (410)
++ ++||||.+++.+++++|.++|+++|+++|+|++|........+.+.. ..... ...++.|+||.++. ++|
T Consensus 144 ~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~---~~~~~--~d~~~~s~sK~l~~---~~G 215 (353)
T PLN02721 144 ENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVH---RLVKA--ADSVSVCLSKGLGA---PVG 215 (353)
T ss_pred eccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHH---HHhhh--CCEEEEecccccCC---cee
Confidence 44 68999999999999999999999999999999975322100011111 11212 23445589999873 357
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|+ +..++++++.+...... ....+...+..++..+. .+ ++..++. ++..++++.+.+.|+ +++.
T Consensus 216 ~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~l----~~~~~~~-~~~~~~~~~l~~~L~-~~~~- 279 (353)
T PLN02721 216 SV--IVGSKSFIRKAKRLRKT----LGGGMRQVGVLAAAALV---AL----QENVPKL-EDDHKKAKLLAEGLN-QIKG- 279 (353)
T ss_pred eE--EecCHHHHHhHHHHHHh----cCCCeehhHHHHHHHHH---HH----HHHHHHH-HHHHHHHHHHHHHHH-hCCC-
Confidence 64 33477766665442221 11111112212111111 11 1222232 333566778888888 7631
Q ss_pred CCcc--cccCCcceeeecCC------CHH-HHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283 346 KDWS--FILRQIGMFSFTGL------NKA-QSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 346 ~~~~--~~~~~~~~~~~~~~------~~~-~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~ 408 (410)
+. ...++ +.|+|+.+ +.+ +.++|. ++||.+.|++ |+++. ..+++++++++++|++++..
T Consensus 280 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 280 --LRVNVAAVE-TNIVYFDITDGSRITAEKLCKSLE-EHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred --cEEecCCcc-ceEEEEEccCCccccHHHHHHHHH-hCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 22 33344 44566533 233 455554 6799999986 99976 45899999999999998765
No 128
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=1.2e-25 Score=213.29 Aligned_cols=315 Identities=12% Similarity=-0.000 Sum_probs=201.1
Q ss_pred cHHHHHHHHHhhccCCCccCc-C------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283 54 LDVVKKAENLMLERGENKEYL-P------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~-~------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~ 126 (410)
.+.+.+++.+........++. . ..-..++++.+++++.. +.+.+ ++||++++..++ ...+.
T Consensus 21 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~--------~~~~i--~~g~~~a~~~~~--~~l~~ 88 (370)
T TIGR02539 21 TEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGM--------DEARV--THGAREGKFAVM--HALCK 88 (370)
T ss_pred cHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCC--------CceEE--ECChHHHHHHHH--HHhhC
Confidence 577888877764321111111 0 11356788888888532 34555 799999998873 34467
Q ss_pred CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEeCCCCCCCCCCCCHHHH
Q 015283 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPEQW 202 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~~~p~NPtG~~~~~~~l 202 (410)
+||.|+++.+.|.+....++..|++++.++..++.++.+|++++++.+++. .+++.++++++|+||||... ++
T Consensus 89 ~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~---~l 165 (370)
T TIGR02539 89 EGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP---DA 165 (370)
T ss_pred CCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc---CH
Confidence 999999988886555567788999999999754456889999999988641 12466777899999999954 56
Q ss_pred HHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH
Q 015283 203 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 203 ~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
++|+++|+++|+++|+|++|.....+ .+. . ..+.+++++|+||.++ +|.|+||+++ ++++++.+..
T Consensus 166 ~~i~~la~~~~~~livDea~~~g~~~---~~~------~-~~~~di~v~s~sK~~~-~~g~~G~l~~---~~~~i~~l~~ 231 (370)
T TIGR02539 166 GKVAKVCREKGVPLLLNCAYTVGRMP---VSA------K-EIGADFIVGSGHKSMA-ASGPCGVLGM---SEEWEDIVLR 231 (370)
T ss_pred HHHHHHHHHcCCeEEEECccccCCcC---CCH------H-HcCCCEEEeeCccccc-CCCCEEEEEE---CHHHHhhhcc
Confidence 67777899999999999998764321 111 1 1134577799999998 5678999865 7786666554
Q ss_pred HHHhhccCc---c-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc--ccCCcc
Q 015283 283 QLKRLARPM---Y-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF--ILRQIG 356 (410)
Q Consensus 283 ~~~~~~~~~---~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--~~~~~~ 356 (410)
.......+. + ..+...++.++...+.+ +.+.+++.++.++. ++++.+.|+ ++|+ .. ..+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~l~~~~~~~~~-~~~l~~~L~-~~g~----~~~~~~~s~t 299 (370)
T TIGR02539 232 KSRYSPVKEVELLGCTSRGAPIVTMMASFPH------VVERVKRWDEEVKK-TRWFVAELE-DIGF----IQLGQKPKEH 299 (370)
T ss_pred cccCCccceeeeecccccccHHHHHHHHHHH------HHHHHHHHHHHHHH-HHHHHHHHH-hCCc----EEEccCCCcC
Confidence 322111100 0 11111222233333321 12233344444444 457999998 8873 32 223445
Q ss_pred eeeecCCC------------HHHHHHhhhcCcEE-EcCCC----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 357 MFSFTGLN------------KAQSDNMTNKWHVY-MTKDG----RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 357 ~~~~~~~~------------~~~~~~ll~~~gi~-v~~~g----Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.|+++... ...+.+.|.++||. +.++. |+++.+.++++++++++.|+++++++
T Consensus 300 ~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 300 DLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred ceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 56655321 11344444456997 77753 88864459999999999999998764
No 129
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.94 E-value=4.7e-25 Score=207.48 Aligned_cols=310 Identities=15% Similarity=0.008 Sum_probs=205.7
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEE
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 132 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl 132 (410)
+++.+++++.+..... ..|.+.....++++.+++++. ++++++ +.||++++..+. ...+.+||.|+
T Consensus 10 ~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~g--------~~~~~~--~~~gt~a~~~~~--~~l~~~gd~v~ 75 (338)
T cd06502 10 PTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELFG--------KEAALF--VPSGTAANQLAL--AAHTQPGGSVI 75 (338)
T ss_pred CCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHhC--------CCeEEE--ecCchHHHHHHH--HHhcCCCCeEE
Confidence 3789999988765331 357667778899999999864 245666 788999888773 33467999999
Q ss_pred EcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283 133 ISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 133 ~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~----~~~~~ii~~~p~NPtG~~~~~~~l~~i 205 (410)
++.|+|..+.. .....|++++.++. + .+.+|++++++++.+.. ++++++++++|+|| |.+++.+++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i 151 (338)
T cd06502 76 CHETAHIYTDEAGAPEFLSGVKLLPVPG--E-NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAI 151 (338)
T ss_pred EecCcceeeecCCcHHHHcCceEEeecC--C-CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHH
Confidence 99999876543 23457888888876 2 26789999999987421 25677888999997 667799999999
Q ss_pred HHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283 206 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 285 (410)
Q Consensus 206 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 285 (410)
+++|+++|+++|+||+|..+....... .+.... . ...+++.|+||.++++| |++ +..++++++++.....
T Consensus 152 ~~~~~~~~~~livDea~~~~~~~~~~~---~~~~~~-~-~~d~~~~s~sK~~~~~~---g~~--~~~~~~~~~~~~~~~~ 221 (338)
T cd06502 152 SALAKENGLPLHLDGARLANAAAALGV---ALKTYK-S-GVDSVSFCLSKGGGAPV---GAV--VVGNRDFIARARRRRK 221 (338)
T ss_pred HHHHHHcCCeEeechHHHHHHHHhcCC---CHHHHH-h-cCCEEEEeccccCCCcc---ceE--EECCHHHHHHHHHHHH
Confidence 999999999999999975432110111 111111 1 22356889999999886 553 3447777676654332
Q ss_pred hhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceee-ecCCC
Q 015283 286 RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS-FTGLN 364 (410)
Q Consensus 286 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~ 364 (410)
... ...+.+...+.++...|++..+ .+..+++.++++++.+.|+ ++|. ...++.++++. +..-.
T Consensus 222 ~~~--~~~~~~~~~~~a~~~~L~~~~~--------~~~~~~~~~~~~~l~~~L~-~~~~----~~~~~~~~~~~v~~~~~ 286 (338)
T cd06502 222 QAG--GGMRQSGFLAAAGLAALENDLW--------LRRLRHDHEMARRLAEALE-ELGG----LESEVQTNIVLLDPVEA 286 (338)
T ss_pred HhC--CChhhHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHHHHHHH-hcCC----CcccccCCeEEEecCCc
Confidence 111 1112344555556666665422 2445677777889999998 8773 34445544432 22212
Q ss_pred HHHHHHhhh------cCcEEEcCCC----eEEecCC-CcccHHHHHHHHHHH
Q 015283 365 KAQSDNMTN------KWHVYMTKDG----RISLAGL-SLAKCEYLADAIIDS 405 (410)
Q Consensus 365 ~~~~~~ll~------~~gi~v~~~g----Ris~~~~-~~~~i~~~~~~l~~~ 405 (410)
.....++.+ ++|+.+.+.+ ||+.... +++++++++++++++
T Consensus 287 ~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 338 (338)
T cd06502 287 NAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKAV 338 (338)
T ss_pred cHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhcC
Confidence 222333332 3699887653 9987643 889999999998753
No 130
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=2.2e-25 Score=213.28 Aligned_cols=337 Identities=12% Similarity=0.045 Sum_probs=207.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|..-...|+. +|.+.+++.+++.... ...........++.+.+++. .+ .+++.+ +++|+
T Consensus 31 ~~~lD~~~g~~~~~lGh~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~----~~----~~~v~~--~~sGs 98 (389)
T PRK01278 31 ERYLDFASGIAVNSLGHA--HPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVEN----SF----ADKVFF--TNSGA 98 (389)
T ss_pred CEEEECCccHhhccCCCC--CHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhh----CC----CCEEEE--cCCcH
Confidence 468899887543345663 6899998888875421 11111122233455555444 21 368888 99999
Q ss_pred hHHHHHHHHHHHh--CCCC----EEEEcCCCCcchhhhhhhCCCCccceeee-c-CCCcc----cChhhHHHHHhcCCCC
Q 015283 113 GSLRLAAALIERY--FPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYY-D-PKTVG----LDFEGMIADIKAAPGG 180 (410)
Q Consensus 113 ~a~~~~~~~~~~~--~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~----~d~~~l~~~i~~~~~~ 180 (410)
+|++.+.++.+.+ .+|| +|++.+++|.++.......+......+.. + ..++. .|++.+++.+.+ +
T Consensus 99 eA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~ 175 (389)
T PRK01278 99 EAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP---N 175 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC---C
Confidence 9999997777654 3676 99999999998876555443332221100 0 11111 588999988864 6
Q ss_pred cEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
++++++.+++||+| .+++.+.+++|.++|++||+++|+||+|.+++..+ ..+..... ...++ +.|+||.++
T Consensus 176 ~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~~-~~~pd---i~t~sK~l~- 247 (389)
T PRK01278 176 TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG---KLFAHEWA-GVTPD---IMAVAKGIG- 247 (389)
T ss_pred eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---cceeeccc-CCCCC---EEEEehhcc-
Confidence 77777777888998 78899999999999999999999999999886432 11111111 11123 348999998
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+|+|+||+++ ++++.+.+ .......+.+.+.+++.++...|+.-+ ...+.++.++..++++++.+.+.+
T Consensus 248 ~G~~ig~~~~---~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~l~~l~~--- 316 (389)
T PRK01278 248 GGFPLGACLA---TEEAAKGM----TPGTHGSTYGGNPLAMAVGNAVLDVIL-APGFLDNVQRMGLYLKQKLEGLVD--- 316 (389)
T ss_pred CCcceEEEEE---cHHHHhcc----CCCCCCCCCCccHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHh---
Confidence 8999999855 66644443 322222333455666666644443110 001122333344444433333222
Q ss_pred hccCCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 340 AKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 340 ~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+ ..+....+ .|.+.++.+ ..++..+++++ ||.+.|++ ||+++. .+++++++++++|++++.++
T Consensus 317 -~~~--~~~~~v~g-~G~~~~i~~~~~~~~~~~~l~~~-GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 317 -RFP--DVIEEVRG-KGLLLGLKCVVPNRDLVQALRDE-GLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred -hCC--CceeeEec-ccEEEEEEEecCHHHHHHHHHHC-CeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 121 00122233 455655433 24556777775 99999875 888643 58999999999999998753
No 131
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=2.5e-25 Score=214.14 Aligned_cols=326 Identities=13% Similarity=0.074 Sum_probs=213.6
Q ss_pred eeecCCCcccccHHHHHHHHHhhccCC----CccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 43 AYRTEELQPYVLDVVKKAENLMLERGE----NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
.|+|..+..++++.+.+++.+...... ...|. -..-.+++|+++++++... ++++|++ |+|+|++
T Consensus 25 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~--t~g~t~~ 97 (406)
T PRK09295 25 AYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINAR-----SAEELVF--VRGTTEG 97 (406)
T ss_pred EEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcC-----CCCeEEE--eCCHHHH
Confidence 455666777778999999877764211 01111 0123568899999987542 2678999 9999999
Q ss_pred HHHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283 115 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188 (410)
Q Consensus 115 ~~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~ 188 (410)
+..++..+. .+.+||+|+++++.|++ +...++..|++++.++.. .++.+|++++++.+++ +++++++++
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~---~t~lv~l~~ 172 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPALFDE---RTRLLAITH 172 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCCCHHHHHHhcCC---CcEEEEEec
Confidence 998754331 35699999999988764 445556789999999873 4566899999998865 678888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
|+||||.+.+ +++|+++|+++|+++++|++|...... . .+ ...+.++++.|++|.+|++| +||++
T Consensus 173 ~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~-~-----~~----~~~~~D~~~~s~~K~~gp~G--~G~l~ 237 (406)
T PRK09295 173 VSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHHP-V-----DV----QALDCDFYVFSGHKLYGPTG--IGILY 237 (406)
T ss_pred chhcccccCC---HHHHHHHHHHcCCEEEEEcccccCccc-c-----Cc----hhcCCCEEEeehhhccCCCC--cEEEE
Confidence 9999999776 566777799999999999997543311 1 11 12235688899999988776 68986
Q ss_pred EEeCCchhHHHHHHHHHhh------------------ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 269 VVCSSSDLAARVKSQLKRL------------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
+ +++..+.+....... .+...++++..+..++...++.- . ...+++++++.++.
T Consensus 238 ~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~---~--~~g~~~i~~~~~~l 309 (406)
T PRK09295 238 V---KEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYV---S--ALGLNNIAEYEQNL 309 (406)
T ss_pred E---chHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHH---H--HhCHHHHHHHHHHH
Confidence 5 666544432111000 00011123333333333222210 0 11245777888888
Q ss_pred HHHHHHHhhhccCCCCCcccccC--Ccceeee--cCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecCC
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILR--QIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAGL 390 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~--~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~~ 390 (410)
++++.+.|. +++. +++..+ ..+++.| .+.+.+.+.+.++++||.++.| + |+|+...
T Consensus 310 ~~~l~~~l~-~~~~---~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~y 385 (406)
T PRK09295 310 MHYALSQLE-SVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY 385 (406)
T ss_pred HHHHHHHHh-cCCC---EEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCC
Confidence 999999887 6631 333332 2344433 2345555555667789999654 2 9987643
Q ss_pred -CcccHHHHHHHHHHHhh
Q 015283 391 -SLAKCEYLADAIIDSYH 407 (410)
Q Consensus 391 -~~~~i~~~~~~l~~~l~ 407 (410)
|++|++.+++.|+++..
T Consensus 386 nt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 386 NTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 88999999999998754
No 132
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=4.4e-25 Score=212.68 Aligned_cols=329 Identities=15% Similarity=0.097 Sum_probs=209.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
.+.+++..++|+ +..+ +|.+++++.+.+... . ...|+......+|++.+++++.. ++.+++
T Consensus 46 ~~~~~~~sn~yl---~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-------~~~i~~-- 112 (410)
T PRK13392 46 RRVTIWCSNDYL---GMGQ-HPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-------ESALLF-- 112 (410)
T ss_pred ceEEEEECCCcc---CCCC-CHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-------CCEEEE--
Confidence 457888887764 3222 578888887766431 1 01232233467899999999642 455666
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-CCCcEEEEe
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLH 186 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~~ii~ 186 (410)
++|++++..+...+....+||.|+++.+.|..+...++..|.++..++. + |.+.+++.+... .++++++++
T Consensus 113 -~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 113 -TSGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred -CcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEE
Confidence 5567777666443322348898888777887777777778887765543 1 455666666532 246788888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC-cEEEEecccccccccCCCcc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~sK~~~~~G~r~G 265 (410)
++|+||||.+.+ +++|.++|+++|+++|+||+|....+++.. . ++.......+ .+++++|+||.||.+| |
T Consensus 185 ~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g-~--g~~~~~~~~~~~div~~tlsK~~g~~G---G 255 (410)
T PRK13392 185 ESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARG-G--GIAERDGLMDRIDMIQGTLAKAFGCLG---G 255 (410)
T ss_pred eCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCC-C--chhhhccCCCCCcEEEEEChHhhhccc---c
Confidence 999999999876 667777799999999999998833322111 1 1111111112 2488899999999887 8
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|+++ ++++++.+........ .....+...+.++...|+..+ .....+++++++++++.+.|+ ++|
T Consensus 256 ~~~~---~~~~~~~l~~~~~~~~--~s~~~~~~~~~a~~aaL~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g-- 320 (410)
T PRK13392 256 YIAA---SADLIDFVRSFAPGFI--FTTALPPAVAAGATAAIRHLK-------TSQTERDAHQDRVAALKAKLN-ANG-- 320 (410)
T ss_pred hhhc---CHHHHHHHHHhCcchh--ccCcCCHHHHHHHHHHHHHHh-------cCHHHHHHHHHHHHHHHHHHH-HcC--
Confidence 8643 7776665443221111 112233344555544444211 113455778888999999998 877
Q ss_pred CCcccccCCccee-eecCCC---HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 346 KDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 346 ~~~~~~~~~~~~~-~~~~~~---~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+.++.++++ ++++.. .++.++|++++||.+.+. | ||++.. .++++++++++.|+++++++
T Consensus 321 --~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 321 --IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred --CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 35555555554 444532 244566776679998752 2 888753 38999999999999987653
No 133
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.94 E-value=3.5e-25 Score=212.12 Aligned_cols=326 Identities=13% Similarity=0.085 Sum_probs=208.2
Q ss_pred CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-CccCcCCcc----cHHHHHHHHHHhcCCCCCcccCCceEE
Q 015283 32 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVAT 105 (410)
Q Consensus 32 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~y~~~~g----~~~lr~aia~~~~~~~~~~~~~~~i~~ 105 (410)
.+.+.|||+.|.+ .|+. .+|.+.+++.+.+.. .. ...|....| ..++++.+++++. . ++.+++
T Consensus 37 ~g~~~id~~~~~~---~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~----~---~~~i~~ 105 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLA-RHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG----A---ERALLF 105 (385)
T ss_pred CCceEEEeeCCCc---ccCC-CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----C---CcEEEE
Confidence 3467899998864 2332 257888888777643 10 122222223 4566666666642 1 344544
Q ss_pred EecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283 106 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 185 (410)
Q Consensus 106 ~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii 185 (410)
++|++++..+ +...+.+||.|++++|+|+.+...+...|++++.++. .|++.+++.++..++.+.+++
T Consensus 106 ---~~g~~~~~~~--l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 106 ---SSGYAANLAV--LTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred ---CcHHHHHHHH--HHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEE
Confidence 5677766654 2334679999999999999999888888988887765 378899888875333467777
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 265 (410)
+++++||||.. .++++|+++|++||+++|+||+|..+.++........ .......++++++.|+||.++++| |
T Consensus 174 ~~~~~~~~G~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G---g 246 (385)
T PRK05958 174 TESVFSMDGDL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAA-EAGLAGEPDVILVGTLGKALGSSG---A 246 (385)
T ss_pred EEecccCCCCc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHH-hhCCCCCCceEEEEechhhcccCC---c
Confidence 78899999984 4577888889999999999999865433211111111 011223458899999999998766 8
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|++. ++++.+.+....... .....++...+.++...|+.. .+ ..+.++++.++++++.+.|+ +.+
T Consensus 247 ~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~aal~~~------~~-~~~~~~~~~~~~~~l~~~L~-~~~-- 311 (385)
T PRK05958 247 AVLG---SETLIDYLINRARPF--IFTTALPPAQAAAARAALRIL------RR-EPERRERLAALIARLRAGLR-ALG-- 311 (385)
T ss_pred EEEc---CHHHHHHHHHhCccc--eecCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH-HcC--
Confidence 8643 667555543221111 111123333333333333311 01 13567788889999999998 776
Q ss_pred CCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHh
Q 015283 346 KDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
+++..+.++ |+++.+. .++.+++.+ +||.+.++ | ||+++. .+++++++++++|++++
T Consensus 312 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 312 --FQLMDSQSA-IQPLIVGDNERALALAAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred --CCcCCCCCC-EEEEEeCCHHHHHHHHHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 344555544 4444331 234566654 69999752 2 999863 48999999999998864
No 134
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=5e-25 Score=211.64 Aligned_cols=327 Identities=14% Similarity=0.051 Sum_probs=211.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-...|+. +|.+.+++.+.+... ....|.+. ...++.+.+++++... .++++++ ++||
T Consensus 43 ~~~lD~~s~~~~~~lG~~--~p~v~~ai~~~~~~~~~~~~~~~~~-~~~~la~~l~~~~~~~-----~~~~v~~--~~sg 112 (398)
T PRK03244 43 KEYLDLLGGIAVNALGHA--HPAVVEAVTRQLATLGHVSNLFATE-PQIALAERLVELLGAP-----EGGRVFF--CNSG 112 (398)
T ss_pred CEEEECCcCHhhccCCCC--CHHHHHHHHHHHHhccCccCccCCH-HHHHHHHHHHHhCCCC-----CCCEEEE--eCch
Confidence 567899887653344542 588888888777541 12346433 2346777777664211 2468999 9999
Q ss_pred hhHHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCCcccChhhHHHHHhcC
Q 015283 112 TGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
++++..+.++... +| +.|+..+++|..+..... ..|. ++..+|. .|++.+++.+.+
T Consensus 113 sea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~- 182 (398)
T PRK03244 113 AEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD- 182 (398)
T ss_pred HHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcC-
Confidence 9999999776644 44 678888888877643222 1221 1222222 378888888753
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 256 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 256 (410)
++.++++++++||||.+++.++ +++|.++|++||+++|+||+|.+|+.. ...+.... ....+++ .+|||.
T Consensus 183 --~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~---g~~~~~~~-~~~~pDi---~t~sK~ 253 (398)
T PRK03244 183 --DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRT---GAWFAHQH-DGVTPDV---VTLAKG 253 (398)
T ss_pred --CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccc---chHHhhhh-hCCCCCE---EEEchh
Confidence 6677777888999999998776 999999999999999999999887643 12222111 1222343 388999
Q ss_pred ccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 257 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 257 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
++ +|+|+||+++ ++++.+.+ .......+.+.+.+++.++...|+.-. .++..++++++++++.+
T Consensus 254 l~-~G~~ig~~~~---~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~l~~~~--------~~~~~~~~~~~~~~l~~ 317 (398)
T PRK03244 254 LG-GGLPIGACLA---FGPAADLL----TPGLHGSTFGGNPVACAAALAVLDTIA--------SEGLLENAERLGEQLRA 317 (398)
T ss_pred hh-CCcccEEEEE---cHHHHhhc----cCCCCcCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHH
Confidence 99 8999999855 66654443 222222223455566666655543110 02345667777888888
Q ss_pred HhhhccCCCCCcccccCCcceeeecCCC----HHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283 337 SLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
.|+ +++.+ .....+..|.+.|+.+. ..+..++++ +||.+.+.+ |++++. .+++++++++++|++++.
T Consensus 318 ~L~-~~~~~--~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~ 393 (398)
T PRK03244 318 GIE-ALGHP--LVDHVRGRGLLLGIVLTAPVAKAVEAAARE-AGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD 393 (398)
T ss_pred HHH-hcCCC--ceeeEeeccEEEEEEEeccHHHHHHHHHHH-CCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 888 76521 11112235677777552 234555655 699998754 888665 589999999999999987
Q ss_pred hc
Q 015283 408 NV 409 (410)
Q Consensus 408 ~~ 409 (410)
+.
T Consensus 394 ~~ 395 (398)
T PRK03244 394 AA 395 (398)
T ss_pred hc
Confidence 64
No 135
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=1.8e-25 Score=213.66 Aligned_cols=322 Identities=13% Similarity=0.046 Sum_probs=209.0
Q ss_pred eecCCCcccccHHHHHHHHHhhccCC---CccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGE---NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 116 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~ 116 (410)
|+|..+.+++++.+.+++.+.+.... ...|. ...-.+++|+.+++++... +++|++ ++|+++++.
T Consensus 3 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~i~~--~~g~t~a~~ 74 (381)
T PRK02948 3 YLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGE------EQGIYF--TSGGTESNY 74 (381)
T ss_pred eccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCcHHHHHH
Confidence 56777777778999999887764211 01110 0122467788888886432 678999 999999998
Q ss_pred HHHHHHHH--hCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 117 LAAALIER--YFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 117 ~~~~~~~~--~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
.+...+.. ..+||.|+++...|+.+.. .++..|.+++.+++. +++.+|++++++.+++ ++.++++++|+|
T Consensus 75 ~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~---~~~lv~~~~~~n 149 (381)
T PRK02948 75 LAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAITP---DTVLASIQHANS 149 (381)
T ss_pred HHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcCC---CCEEEEEECCcC
Confidence 87433321 1478999999977765544 456779999999873 4567899999998864 677888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+.+ +++|.++|+++|+++++|++ +.++..+.+ ....+.++++.|++|.+|++| +|++++
T Consensus 150 ~tG~~~~---~~~I~~l~~~~~~~vivD~~-~~~g~~~~~---------~~~~~~d~~~~s~~K~~gp~G--~G~l~~-- 212 (381)
T PRK02948 150 EIGTIQP---IAEIGALLKKYNVLFHSDCV-QTFGKLPID---------VFEMGIDSLSVSAHKIYGPKG--VGAVYI-- 212 (381)
T ss_pred CcEeehh---HHHHHHHHHHcCCEEEEECh-hhccccccC---------cccCCCCEEEecHHhcCCCCc--EEEEEE--
Confidence 9999766 55777789999999999976 555532111 112346788999999999888 588754
Q ss_pred CCchh-HHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 272 SSSDL-AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 272 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
+++. ...+.............+++..++.++...++.. .+.+++.+++++++++++.+.|+ +++. ++
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~----~v 280 (381)
T PRK02948 213 -NPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI------LKNMQEESLRFKELRSYFLEQIQ-TLPL----PI 280 (381)
T ss_pred -cCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHh-cCCC----CE
Confidence 4442 1111000000000112244555555554444321 23356778999999999999998 8873 22
Q ss_pred ccCCccee--------eecCCCHHH-HHHhhhcCcEEEcC-------------------------CC--eEEecC-CCcc
Q 015283 351 ILRQIGMF--------SFTGLNKAQ-SDNMTNKWHVYMTK-------------------------DG--RISLAG-LSLA 393 (410)
Q Consensus 351 ~~~~~~~~--------~~~~~~~~~-~~~ll~~~gi~v~~-------------------------~g--Ris~~~-~~~~ 393 (410)
.......+ ...+++.+. ..++ +++||.+.+ .+ |||+.. .|++
T Consensus 281 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~ 359 (381)
T PRK02948 281 EVEGHSTSCLPHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKD 359 (381)
T ss_pred EEeCCCccCcCCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHH
Confidence 21111111 112334443 4454 567999973 12 999774 3899
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
|++++++.|+++++.
T Consensus 360 di~~l~~~l~~~~~~ 374 (381)
T PRK02948 360 QIDTTIHALETIGNQ 374 (381)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 136
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.94 E-value=4.4e-25 Score=212.50 Aligned_cols=329 Identities=15% Similarity=0.161 Sum_probs=211.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
.+.++|..|.. ++++.+++++.+.+.. .....|.+..+.+.+++.+++++.+.++.. ...|.+
T Consensus 19 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~-- 87 (402)
T cd00378 19 RETLELIASEN-------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQP-- 87 (402)
T ss_pred HhCeeeeccCC-------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeec--
Confidence 45788876653 3479999998765421 112445566677777776655544444432 234444
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-----hhhCCCCccceeeecC-CCcccChhhHHHHHhcCCCCc
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-----FNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGS 181 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~ 181 (410)
.+|++++..++ ...+.+||+|++++|+|+.+... ++..|.++..+++..+ +++.+|++.+++.+.+ +++
T Consensus 88 -~sgt~a~~~~l--~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~--~~~ 162 (402)
T cd00378 88 -HSGSQANLAVY--FALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE--FKP 162 (402)
T ss_pred -CCcHHHHHHHH--HHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh--CCC
Confidence 46788888873 44467999999999999877544 5567777766665323 2688999999999864 255
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC-CCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283 182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 260 (410)
+++++++|+||+. .++++|+++|+++|+++|+|++| .++.+.+.. ... .. ...++++|+||.+ +
T Consensus 163 ~~v~~~~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~--~~~----~~--~~dv~~~s~sK~l--~ 227 (402)
T cd00378 163 KLIVAGASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVF--PNP----LP--GADVVTTTTHKTL--R 227 (402)
T ss_pred CEEEecCcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhcccC--CCc----cc--CCcEEEeccccCC--C
Confidence 6677778887753 36888999999999999999995 444332110 011 11 2247899999987 7
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 340 (410)
|+|.||++ +.++++.+++....... ..+++......++...+.. .. ....++.+++++++++++.+.|+
T Consensus 228 G~~gg~i~--~~~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~~al~~--~~---~~~~~~~~~~~~~~~~~l~~~L~- 296 (402)
T cd00378 228 GPRGGLIL--TRKGELAKKINSAVFPG---LQGGPHLHVIAAKAVALKE--AL---EPEFKAYAKQVVENAKALAEALK- 296 (402)
T ss_pred CCCceEEE--eccHHHHHHHHHHhCcc---ccCCchHHHHHHHHHHHHH--Hh---hHHHHHHHHHHHHHHHHHHHHHH-
Confidence 89999984 44437666654432211 1222222222222222211 10 11345677888999999999998
Q ss_pred ccCCCCCcccc-cCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------------C-eEEecC-----CCcccH
Q 015283 341 KDKSGKDWSFI-LRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISLAG-----LSLAKC 395 (410)
Q Consensus 341 ~~g~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------------g-Ris~~~-----~~~~~i 395 (410)
+.|+ .+. .+.+++++|+.+ +...+.++++++||.+.+. + ||++.. ++++++
T Consensus 297 ~~g~----~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di 372 (402)
T cd00378 297 ERGF----KVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEM 372 (402)
T ss_pred hCCC----eEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHH
Confidence 7773 433 356688888755 2455666777789999531 1 887643 358999
Q ss_pred HHHHHHHHHHhhh
Q 015283 396 EYLADAIIDSYHN 408 (410)
Q Consensus 396 ~~~~~~l~~~l~~ 408 (410)
+++++.|++++++
T Consensus 373 ~~~~~~l~~~~~~ 385 (402)
T cd00378 373 EEIADFIARALKD 385 (402)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998754
No 137
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1.1e-24 Score=209.75 Aligned_cols=329 Identities=13% Similarity=0.071 Sum_probs=213.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC----CccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE----NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
+++-|..| +..++|+.+.+++.+.+.... ...+. .....+++|+.+++++... ++++|++
T Consensus 18 ~~~yld~~------~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~-----~~~~v~~- 85 (403)
T TIGR01979 18 PLVYLDSA------ATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAA-----SDEEIVF- 85 (403)
T ss_pred ceEEEeCc------cccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE-
Confidence 45555544 444557889998877653211 01111 1225678999999987433 1468999
Q ss_pred ecCChhhHHHHHHHHHH--HhCCCCEEEEcCCCCcch----hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283 107 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~--~~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 180 (410)
++|+++++.+++..+. .+.+||.|+++++.|++. ....+..|++++.++.. +++.+|++.+++.+.+ +
T Consensus 86 -~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~---~ 159 (403)
T TIGR01979 86 -TRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTE---K 159 (403)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhcc---C
Confidence 9999999988754332 246899999999987663 34556789999999873 5567899999998875 6
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 260 (410)
++++++++|+||||...+ +++|.++|+++|+++++|++|...... . .+ ...+.++++.|++|.+|++
T Consensus 160 ~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~-~-----~~----~~~~~d~~~~s~~K~~gp~ 226 (403)
T TIGR01979 160 TKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMP-V-----DV----QALDCDFYVFSGHKMYGPT 226 (403)
T ss_pred CeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCccc-c-----Cc----cccCCCEEEEecccccCCC
Confidence 788888999999999877 567777799999999999997543211 1 11 1224678899999999877
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHhh-----------------ccCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHH
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKRL-----------------ARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEM 322 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~ 322 (410)
| +|++++ +++.++.+....... .+...++++.....++...++. +.+ ..++
T Consensus 227 G--~g~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~------~~~~g~~~ 295 (403)
T TIGR01979 227 G--IGVLYG---KEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDY------LEAIGLEN 295 (403)
T ss_pred C--ceEEEE---chHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHH------HHHhCHHH
Confidence 6 688755 666544432110000 0000112233222222222211 111 2456
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCC-----cceeee--cCCCHHHHHHhhhcCcEEEcCC-------------
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-----IGMFSF--TGLNKAQSDNMTNKWHVYMTKD------------- 382 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~ll~~~gi~v~~~------------- 382 (410)
.+++..+.++.+.+.|+ .++. +++..+. ++++.| .+.+...+.+.++++||.+.+|
T Consensus 296 ~~~~~~~l~~~l~~~l~-~~~g---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~ 371 (403)
T TIGR01979 296 IEAHEHELTAYALERLG-EIPG---LRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGV 371 (403)
T ss_pred HHHHHHHHHHHHHHHHh-cCCC---EEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCC
Confidence 77888888889999887 6631 3443332 344433 2344545556667789998752
Q ss_pred -C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 383 -G--RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 383 -g--Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ |||+.. .+++|++++++.|+++++.+
T Consensus 372 ~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 372 PATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 2 999874 38899999999999988764
No 138
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=9.2e-25 Score=206.42 Aligned_cols=321 Identities=16% Similarity=0.071 Sum_probs=203.7
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccC----cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y----~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
.+++|+...+| |.+. +|.+.+++.+.++.... ..| .......++++++++++.. ++.+ + +
T Consensus 2 ~~~~~~~~~~~---~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~~i-v--~ 67 (349)
T cd06454 2 KVLNFCSNDYL---GLAN-HPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK-------EAAL-V--F 67 (349)
T ss_pred CceecccCCcc---ccCC-CHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC-------CCEE-E--e
Confidence 35677766653 4443 47788888887753210 112 1233446778888877532 2334 4 4
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC--CCCcEEEEe
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLH 186 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii~ 186 (410)
++|++++..+ +...+.+||.|++++|+|+++...++..|++++.++. +|.+++++.+.+. +++++++++
T Consensus 68 ~sg~~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~ 138 (349)
T cd06454 68 SSGYAANDGV--LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVT 138 (349)
T ss_pred ccHHHHHHHH--HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEE
Confidence 6777777765 3344679999999999999998888888988877653 4677888887653 245678888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH-hhcCCcEEEEecccccccccCCCcc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G 265 (410)
++++||||... ++++|+++|+++|+++|+|++|.....+ .... ..... ....+.+++++|+||.++++| |
T Consensus 139 ~~~~~~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~-~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g---G 209 (349)
T cd06454 139 EGVYSMDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYG-PHGR--GVEEFGGLTDDVDIIMGTLGKAFGAVG---G 209 (349)
T ss_pred eccccCCCCcc---CHHHHHHHHHHcCCEEEEEccccccccC-CCCC--ChhhhccccccCcEEEeechhhhcccC---C
Confidence 99999999965 4678888899999999999998643221 1111 11111 123346899999999998655 8
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|++. +++..+.+......... ....+...+.++...++.. .+ .+..+++++++++.+.+.|. +++.
T Consensus 210 ~i~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~------~~-~~~~~~~~~~~~~~l~~~l~-~~g~- 275 (349)
T cd06454 210 YIAG---SKELIDYLRSYARGFIF--STSLPPAVAAAALAALEVL------QG-GPERRERLQENVRYLRRGLK-ELGF- 275 (349)
T ss_pred EEEC---CHHHHHHHHHhchhhhc--cCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH-hcCC-
Confidence 8643 66765555443221111 1123333333333333211 11 24667888899999999998 7763
Q ss_pred CCcccccCCcceeeec-C---CC-HHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHHHHHHHH
Q 015283 346 KDWSFILRQIGMFSFT-G---LN-KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 346 ~~~~~~~~~~~~~~~~-~---~~-~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~~~l~~~ 405 (410)
....+..+.+.+. . .+ .++.+.+++ .||.+.++ + ||++.. .+++++++++++|+++
T Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 276 ---PVGGSPSHIIPPLIGDDPAKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ---cccCCCCCcEEEEeCCChHHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 3333333333222 1 12 334566665 49998642 2 998864 5899999999999875
No 139
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.94 E-value=1.6e-24 Score=193.67 Aligned_cols=313 Identities=19% Similarity=0.147 Sum_probs=201.2
Q ss_pred ccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-h--C-C----------CCEEEEcC
Q 015283 71 KEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-Y--F-P----------GAKVLISS 135 (410)
Q Consensus 71 ~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~--~-~----------gd~Vl~~~ 135 (410)
-+| +...|++++|+-.++.+.-. +++| ..||+.+++++..++.. + . + .-+.++|.
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~------~~~v----iv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPv 131 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVP------PENV----IVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPV 131 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-------GGGE----EE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEE
T ss_pred cCCCCccCChHHHHHHHHHHhCCC------HHHE----EEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecC
Confidence 569 88999999999999997443 7888 45788888876655432 1 1 1 23789999
Q ss_pred CCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHH-HHHcC
Q 015283 136 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADV-IQEKN 213 (410)
Q Consensus 136 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~-~~~~~ 213 (410)
|+|..+..+++..|.+.+.||+.++ ++|.+.+++++.+. +..+.++ ++.-+||||.++|.+..++++.+ +...+
T Consensus 132 PGYDRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~D 207 (425)
T PF12897_consen 132 PGYDRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAED-PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPD 207 (425)
T ss_dssp S--HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTS-TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT
T ss_pred CCchHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcC-CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcC
Confidence 9999999999999999999999543 58999999998652 3445444 44559999999999999999888 34579
Q ss_pred CcccccccCCCCCC-CCCCCch-hHhHHH---hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283 214 HIPFFDVAYQGFAS-GSLDNDA-SSVRLF---ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 288 (410)
Q Consensus 214 ~~li~Deay~~~~~-~~~~~~~-~~~~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~ 288 (410)
..|+.|++|.-... .+.+.+. ..+... .+..++++.+.|+||.- .||.+++++.. +++.++.+++.+..
T Consensus 208 FRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aa---S~~Nl~~~~~~~~~-- 281 (425)
T PF12897_consen 208 FRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAA---SEANLAWIKKHLSV-- 281 (425)
T ss_dssp -EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE----HHHHHHHHHHHHH--
T ss_pred eEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeec---CHHHHHHHHHHhcC--
Confidence 99999999964332 1111111 122222 34567999999999975 68999999644 77777777776551
Q ss_pred cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceeeecCC---C
Q 015283 289 RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL---N 364 (410)
Q Consensus 289 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~---~ 364 (410)
.+.++.-+.|..-..++.|.+ +....|+++.++.++-+.+.+.+.|.++++ ..+.-++..|.+|||+.++. +
T Consensus 282 --~tIgpdKvNQLRHvrff~d~~--gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~ 357 (425)
T PF12897_consen 282 --QTIGPDKVNQLRHVRFFKDAE--GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGT 357 (425)
T ss_dssp --H-S---HHHHHHHHHHHHSHH--THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-
T ss_pred --ceeCccHHHHHHHHHHhcChh--hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCCh
Confidence 133677888888888888754 123678899999999999999888875665 22223788999999988743 5
Q ss_pred HHHHHHhhhcCcEEEcCCC--------------eEEecCCCcccHHHHHHHHHHHhh
Q 015283 365 KAQSDNMTNKWHVYMTKDG--------------RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 365 ~~~~~~ll~~~gi~v~~~g--------------Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
.+.+-++.++.||.++|.| ||+.+..+.++++.+++.+.-+++
T Consensus 358 AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 358 AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 6677788888999999964 998877788999999999877653
No 140
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.93 E-value=1.8e-24 Score=209.06 Aligned_cols=338 Identities=12% Similarity=0.030 Sum_probs=206.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCC----cccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI----EGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
...||+..|......|+. +|.+.+++.+++... ..|... .-..++.+.+++++ +. ..+++++ ++
T Consensus 36 ~~~id~~~~~~~~~lG~~--~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~----~~--~~~~v~~--~~ 103 (413)
T cd00610 36 NRYLDFLSGIGVLNLGHN--HPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALT----PE--GLDKVFF--VN 103 (413)
T ss_pred CEEEEcCccHHhhccCCC--CHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhC----CC--CCCEEEE--cC
Confidence 568999887432234543 688898888877442 334322 22345555555553 22 2578999 99
Q ss_pred ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-------------CCCccceeeecC----CCcccChhhHHH
Q 015283 110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-------------RVPWSEYRYYDP----KTVGLDFEGMIA 172 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~----~~~~~d~~~l~~ 172 (410)
||++|+..+.+++..+.++++|++.+++|.+........ ..++..+|..+. ..+..|++.+++
T Consensus 104 sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 183 (413)
T cd00610 104 SGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEE 183 (413)
T ss_pred cHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHH
Confidence 999999999777766678999999999998764433221 123444554211 124458899999
Q ss_pred HHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 173 DIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 173 ~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
.+.+++.+..++++...+|++|..+ +.+.+++|.++|++||+++|+||+|.+++..+ ....... .+..++ +.
T Consensus 184 ~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g---~~~~~~~-~~~~~d---~~ 256 (413)
T cd00610 184 ALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG---KMFAFEH-FGVEPD---IV 256 (413)
T ss_pred HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhhHhh-cCCCCC---eE
Confidence 8876444566777666677889876 66669999999999999999999999875321 1111111 122223 34
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
|+||.++. |+|+||+++ ++++++.+. ........+.+.+.+++.++...|+.- .+ .+..++++++.
T Consensus 257 t~sK~l~~-g~~~g~~~~---~~~~~~~~~--~~~~~~~~t~~~~~~~~~a~~a~l~~l------~~--~~~~~~~~~~~ 322 (413)
T cd00610 257 TLGKGLGG-GLPLGAVLG---REEIMDAFP--AGPGLHGGTFGGNPLACAAALAVLEVL------EE--EGLLENAAELG 322 (413)
T ss_pred EEcccccC-ccccEEEEE---cHHHHHhhc--cCCCCCCCCCCcCHHHHHHHHHHHHHH------Hh--ccHHHHHHHHH
Confidence 88999995 899999854 777555540 112222122234444445544333210 11 23455666666
Q ss_pred HHHHHHhhhccCCCCCcccccCCcceeeecCC--C-----------HHHHHHhhhcCcEEEcCCC----eEEecC-CCcc
Q 015283 332 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-----------KAQSDNMTNKWHVYMTKDG----RISLAG-LSLA 393 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~ 393 (410)
+++.+.++ ++..........+..|.+.++.+ . ..+...+++ +||.+.|++ |++++. .+++
T Consensus 323 ~~l~~~l~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~v~~~~~~~lR~~~~~~~t~~ 400 (413)
T cd00610 323 EYLRERLR-ELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALE-RGLLLRPSGGNVIRLLPPLIITEE 400 (413)
T ss_pred HHHHHHHH-HHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHH-CCeEEeecCCCEEEEECCCcCCHH
Confidence 67766666 54311011111123344544422 1 223455555 699999873 887654 3889
Q ss_pred cHHHHHHHHHHHh
Q 015283 394 KCEYLADAIIDSY 406 (410)
Q Consensus 394 ~i~~~~~~l~~~l 406 (410)
++++++++|++++
T Consensus 401 ~i~~~~~~l~~~l 413 (413)
T cd00610 401 EIDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
No 141
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.93 E-value=7.4e-24 Score=204.87 Aligned_cols=337 Identities=15% Similarity=0.096 Sum_probs=215.5
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
+...+|+..|..-...|+. +|.+.+++.+++.... ..+.+..+..++++++++++.. .+++.+ ++||+
T Consensus 47 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~-~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~~sGs 114 (423)
T TIGR00713 47 GNEYIDYVLSWGPLILGHA--HPRVVEAVKEALERGT-SYGAPTEAEILLAKEIISRVPS-------VEMVRF--VNSGT 114 (423)
T ss_pred CCEEEEccccccccccCCC--CHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--eCCHH
Confidence 3568999988763345665 6999999988886543 2223566888999999998643 257888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh---CCCCccceeeecC-------CCc---ccChhhHHHHHhcCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND---ARVPWSEYRYYDP-------KTV---GLDFEGMIADIKAAPG 179 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~-------~~~---~~d~~~l~~~i~~~~~ 179 (410)
+|++.+.++.+.+...++|+..+++|.++...+.. .+......+..+. ... -.|++.+++.+.+.++
T Consensus 115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 194 (423)
T TIGR00713 115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE 194 (423)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence 99999988877777779999999999887543221 1111111111000 000 0278899988875333
Q ss_pred CcEEEE-eCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 180 GSFILL-HGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 180 ~~~~ii-~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++.+++ .+.++| +|.+.+ .+.+++|.++|++||+++|+||+|.++..+. .+.. ......+++ .+|||.+
T Consensus 195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~----~~~~-~~~~~~pDi---~t~sK~l 265 (423)
T TIGR00713 195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL----GGAQ-EYFGVEPDL---TTLGKII 265 (423)
T ss_pred cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc----chhH-HHhCCCcch---hhhhhhh
Confidence 545555 467888 798887 5779999999999999999999998886431 1111 112222332 3799999
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKL 334 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (410)
+ +|+|+||++. ++++.+.+... .......+.+.+.+++.++...|+ ++.+ .++.++..+..++.+
T Consensus 266 ~-~G~pig~v~~---~~~i~~~~~~~-~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~-------~~~~~~~~~~~~~~l 333 (423)
T TIGR00713 266 G-GGLPVGAFGG---RREIMERLAPE-GPVYQAGTLSGNPLAMAAGLATLKLLDEEGV-------YTELDELAKRLAEGL 333 (423)
T ss_pred c-CCCceeeeeE---HHHHHHhhCcC-CCeeeccCCCCCHHHHHHHHHHHHHHhcccH-------HHHHHHHHHHHHHHH
Confidence 9 8999999755 77755554321 011111222455555565544443 3222 245555566666666
Q ss_pred HHHhhhccCCCCCccc-ccCCccee-eecCC------------CH----HHHHHhhhcCcEEEcCCC----eEEecCCCc
Q 015283 335 FDSLSAKDKSGKDWSF-ILRQIGMF-SFTGL------------NK----AQSDNMTNKWHVYMTKDG----RISLAGLSL 392 (410)
Q Consensus 335 ~~~l~~~~g~~~~~~~-~~~~~~~~-~~~~~------------~~----~~~~~ll~~~gi~v~~~g----Ris~~~~~~ 392 (410)
.+.++ +.+. .. ....+.++ +++.. +. .+...+++ +||.+.+++ |++++. ++
T Consensus 334 ~~~~~-~~~~----~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~l~~~~-t~ 406 (423)
T TIGR00713 334 SEVLE-DTGI----PHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPSQFEACFLSAAH-TE 406 (423)
T ss_pred HHHHH-hcCC----CeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecCCccceeeECCC-CH
Confidence 66666 6653 22 22334444 32321 11 23446665 699987654 888764 99
Q ss_pred ccHHHHHHHHHHHhhhc
Q 015283 393 AKCEYLADAIIDSYHNV 409 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++|.+++.++
T Consensus 407 ~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 407 EDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999998753
No 142
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=200.84 Aligned_cols=333 Identities=11% Similarity=0.014 Sum_probs=209.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|..-...|+. +|.+.+++.++++... . . +.....++++.+++++....+ .+.+++ +++|++
T Consensus 29 ~~~lD~~s~~~~~~lG~~--~p~v~~a~~~~~~~~~-~-~-~~~~~~~~~~~la~~l~~~~~----~~~~~~--~~sG~~ 97 (377)
T PRK02936 29 KTYLDFTSGIAVCNLGHC--HPTVTKAVQEQLDDIW-H-V-SNLFTNSLQEEVASLLAENSA----GDLVFF--CNSGAE 97 (377)
T ss_pred CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhcc-c-c-ccccCCHHHHHHHHHHHhcCC----CCEEEE--eCCcHH
Confidence 468999888632234553 6888888888875421 1 1 223446888999999866542 257888 899999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhCCCCcc---ceeeecCCCc--ccChhhHHHHHhcCCCCcEEEEeC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARVPWS---EYRYYDPKTV--GLDFEGMIADIKAAPGGSFILLHG 187 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~g~~~~---~v~~~~~~~~--~~d~~~l~~~i~~~~~~~~~ii~~ 187 (410)
|++.+.++.......++|++.+++|.+... .+...+.... ..+..+...+ -.|++.+++.+.+ ++.++++.
T Consensus 98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~ii~e 174 (377)
T PRK02936 98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE---EVAAVMLE 174 (377)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC---CeEEEEEe
Confidence 999997655444444789999988875432 2222221110 1111100000 0278888888864 57778878
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283 188 CAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 188 ~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
.+++++|.. .+++.+++|.++|++||+++|+||+|.+|+..+ ..+..... ...+++ .++||.++ +|+|+||
T Consensus 175 ~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~-~~~~di---~t~sK~l~-~G~~ig~ 246 (377)
T PRK02936 175 VVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQF-GLDPDI---VTVAKGLG-NGIPVGA 246 (377)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhh-CCCCcE---EEEccccc-CCCccEE
Confidence 889999877 578889999999999999999999998876432 22222222 222233 37999999 8999999
Q ss_pred EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CC
Q 015283 267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD--KS 344 (410)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--g~ 344 (410)
++. ++++.+.+ .......+.+++.+++.++...|+.... +...++++++.+++.+.|+ +. +.
T Consensus 247 v~~---~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~l~~~~~--------~~~~~~~~~~~~~l~~~L~-~~~~~~ 310 (377)
T PRK02936 247 MIG---KKELGTAF----GPGSHGSTFGGNPLAMAAAKEVLQVIKQ--------PSFLEEVQEKGEYFLQKLQ-EELEHL 310 (377)
T ss_pred EEE---cHHHHhhc----cCCCCCCCCCCCHHHHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHHHHH-HHHhhC
Confidence 754 77754443 3222222334566677777666543210 1334555566666666665 42 11
Q ss_pred CCCcccccCCcceeeecCCC--HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHh
Q 015283 345 GKDWSFILRQIGMFSFTGLN--KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l 406 (410)
+. +.... ..|+++|+.+. .+.+.+.+.+.||.+.|+| ||+++ ..+++++++++++|++++
T Consensus 311 ~~-~~~v~-~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 311 EC-VKNIR-GKGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred Cc-EEeEe-ecceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 00 11122 34677887663 3334444555799999875 88853 359999999999998864
No 143
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=1.3e-23 Score=202.33 Aligned_cols=322 Identities=15% Similarity=0.088 Sum_probs=204.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CC-CccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GE-NKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~-~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
..++++....|++...+ |.+++++.+++.. .+ ...| .+.....++++.+++++.. +.+++
T Consensus 54 ~~~~~~~~~~YL~l~~~----p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~-- 119 (407)
T PRK07179 54 PDAIILQSNDYLNLSGH----PDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--------ESCLL-- 119 (407)
T ss_pred CcEEEeecCCccCCCCC----HHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--------CcEEE--
Confidence 46789999988877765 5566665555422 11 1122 1223467888999998532 34566
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 187 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~ 187 (410)
+++|++|+..++. ....+||.|++..+.|......+...|.++..++. .|++.+++.+++ ..+.+++++
T Consensus 120 ~~sG~~An~~~l~--~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~--~~~~lV~v~ 188 (407)
T PRK07179 120 CQSGWAANVGLLQ--TIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIER--HGPGIIVVD 188 (407)
T ss_pred ECCHHHHHHHHHH--HhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHh--cCCeEEEEC
Confidence 8999999988743 33568999999999988887777777777655443 488999998875 236677789
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 267 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l 267 (410)
+++||||.+.+ +++|.++|+++|+++|+||+|.....+ ..... .+..+.-....++++.|+||.+| .|+||+
T Consensus 189 ~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g-~~g~g-~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l 260 (407)
T PRK07179 189 SVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHG-PQGAG-LVAELGLTSRVHFITASLAKAFA---GRAGII 260 (407)
T ss_pred CCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcC-CCCCc-hHHhcCCCCCCCEEEeechHhhh---ccCeEE
Confidence 99999999887 567778899999999999998643322 11111 11111101123588999999986 368997
Q ss_pred EEEeCCchhHHHHHHHHHhhccC-cccCC-ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 268 NVVCSSSDLAARVKSQLKRLARP-MYSNP-PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
++ ++++++.+.. .... .++.+ +.....++...++. .+...+.+++++++++++.+.|+ ++|.
T Consensus 261 ~~---~~~~~~~~~~----~~~~~~~~~t~~~~~~aa~~aal~~-------~~~~~~~~~~l~~~~~~l~~~L~-~~g~- 324 (407)
T PRK07179 261 TC---PRELAEYVPF----VSYPAIFSSTLLPHEIAGLEATLEV-------IESADDRRARLHANARFLREGLS-ELGY- 324 (407)
T ss_pred Ee---CHHHHHHHHH----hCcCeeeCCCCCHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHH-HcCC-
Confidence 54 6675444332 1111 12222 22111112222211 11123567889999999999998 8763
Q ss_pred CCcccccCCcceeeecCC----CHHHHHHhhhcCcEEE----cCC-----C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 346 KDWSFILRQIGMFSFTGL----NKAQSDNMTNKWHVYM----TKD-----G--RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v----~~~-----g--Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+. +. +.++++.+ ..+.+.+.+.++||.+ .|+ + ||+++. .|+++++++++.|++++.+.
T Consensus 325 ---~v~-~~-~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 325 ---NIR-SE-SQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred ---CCC-CC-CCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 333 33 34444322 2234444455579973 332 2 999875 48999999999999988753
No 144
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.93 E-value=6.1e-24 Score=201.43 Aligned_cols=312 Identities=13% Similarity=0.007 Sum_probs=196.8
Q ss_pred ccHHHHHHHHHhhccCCCc-------cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh
Q 015283 53 VLDVVKKAENLMLERGENK-------EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 125 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~-------~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~ 125 (410)
+.+.+.+++.+........ .+....-+.++++.+++++.. +++++ ++|+++++..+. ...+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--------~~i~~--~~g~t~al~~~l--~~~~ 80 (361)
T cd06452 13 LTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--------DEARV--TPGAREGKFAVM--HSLC 80 (361)
T ss_pred CCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--------ceEEE--eCCHHHHHHHHH--HHhc
Confidence 4688888888876321101 111112356889999998521 57888 999999998873 3446
Q ss_pred CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC----CCcEEEEeCCCCCCCCCCCCHHH
Q 015283 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQ 201 (410)
Q Consensus 126 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~----~~~~~ii~~~p~NPtG~~~~~~~ 201 (410)
.+||+|+++.++|......++..|++++.++..+..++.+|++.+++.+++.. +++.++++++|+||||. ..+
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~---~~~ 157 (361)
T cd06452 81 EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGN---LHD 157 (361)
T ss_pred CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCee---ecc
Confidence 79999999999887776678889999999988433346899999998886321 25677778999999998 466
Q ss_pred HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283 202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 281 (410)
Q Consensus 202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 281 (410)
+++|+++|+++|+++|+|++|...... . .. ...+.+++++|+||.++ ++.|+||+++ +++.++++.
T Consensus 158 ~~~i~~~~~~~~~~vivD~a~~~g~~~---~---~~----~~~~~d~~~~s~~K~l~-~~~~~G~l~~---~~~~~~~l~ 223 (361)
T cd06452 158 AKKIAKVCHEYGVPLLLNGAYTVGRMP---V---SG----KELGADFIVGSGHKSMA-ASAPIGVLAT---TEEWADIVF 223 (361)
T ss_pred HHHHHHHHHHcCCeEEEECCcccCCcC---C---CH----HHcCCCEEEecCCcccc-CCCCeEEEEE---CHHHHHHHh
Confidence 788888899999999999998743211 1 11 12235789999999998 4569999855 677666654
Q ss_pred HHHHhhc--c-Cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccccc--CC
Q 015283 282 SQLKRLA--R-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFIL--RQ 354 (410)
Q Consensus 282 ~~~~~~~--~-~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~--~~ 354 (410)
....... . ..+. ++....+..+...+.. +.+.+++..+ ..++++++.+.|+ ++ | +++.. +.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~~~~-~~~~~~~l~~~L~-~l~g----~~v~~~~~~ 291 (361)
T cd06452 224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPH------VKERVKRWDE-EVEKARWFVAELE-KIEG----IKQLGEKPK 291 (361)
T ss_pred ccccccccceeeeeccccCchHHHHHHHHHHH------HHHHHHHHHH-HHHHHHHHHHHHh-cCCC----eEEECCCCC
Confidence 3221100 0 0011 1111111122221110 1122222222 2334578888888 77 5 33321 12
Q ss_pred cceeeecCC------------C-HHHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHh
Q 015283 355 IGMFSFTGL------------N-KAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 355 ~~~~~~~~~------------~-~~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
...|+.+.. + .++.+.|++ +||.+...+ |++..+.++++++.+++.|++++
T Consensus 292 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 292 NHDLMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CCceEEEEcCCcchhhhhccccchhHHHHHHH-cCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 222322211 0 135566655 599975443 78875558999999999999875
No 145
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=3.6e-24 Score=207.23 Aligned_cols=327 Identities=14% Similarity=0.095 Sum_probs=208.4
Q ss_pred eecCCCcccccHHHHHHHHHhhccCCC-----ccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGEN-----KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
|+|..+..++++.+.+++.+.+..... ..|.. ....+++|+.+++++... ++++|++ ++|+|+++
T Consensus 35 yLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~--t~g~t~al 107 (424)
T PLN02855 35 YLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINAS-----TSREIVF--TRNATEAI 107 (424)
T ss_pred EeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE--eCCHHHHH
Confidence 334444455678899998776532110 11111 123568999999997542 1478999 99999999
Q ss_pred HHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283 116 RLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189 (410)
Q Consensus 116 ~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p 189 (410)
..++..+. .+.+||+|+++++.|++ +....+..|.+++.++.. .++.+|++.+++.+.+ ++++++++++
T Consensus 108 ~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~---~t~lv~i~~~ 182 (424)
T PLN02855 108 NLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT--PDEVLDVEQLKELLSE---KTKLVATHHV 182 (424)
T ss_pred HHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHHhcc---CceEEEEeCc
Confidence 98754332 35699999999998765 344556789999988873 2345899999999875 6788888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
+||||.+++. ++|+++|+++|+++++|++|.. +..+. .+ ...+.++++.|++|.+|++| +||+++
T Consensus 183 ~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~~-g~~~~-----~~----~~~~~d~~~~s~~K~~gp~G--~G~l~~ 247 (424)
T PLN02855 183 SNVLGSILPV---EDIVHWAHAVGAKVLVDACQSV-PHMPV-----DV----QTLGADFLVASSHKMCGPTG--IGFLWG 247 (424)
T ss_pred cccccccCCH---HHHHHHHHHcCCEEEEEhhhhc-CCcCC-----Cc----hhcCCCEEEeecccccCCCc--cEEEEE
Confidence 9999998875 5677779999999999999742 21111 11 12234678999999888666 799866
Q ss_pred EeCCchhHHHHHHHHHhh----------------ccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283 270 VCSSSDLAARVKSQLKRL----------------ARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQ 332 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (410)
+++.++++....... ......+.+.+...++ ...++ +.. ...+++++++.++.++
T Consensus 248 ---~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~---~~~--~~g~~~i~~~~~~l~~ 319 (424)
T PLN02855 248 ---KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAID---YLS--EIGMDRIHEYEVELGT 319 (424)
T ss_pred ---chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHH---HHH--HhCHHHHHHHHHHHHH
Confidence 666555442211000 0001112233322222 22222 110 1235677888888999
Q ss_pred HHHHHhhhccCCCCCcccccC-------Ccceeee--cCCCHHHHH-HhhhcCcEEEcCC--------------C--eEE
Q 015283 333 KLFDSLSAKDKSGKDWSFILR-------QIGMFSF--TGLNKAQSD-NMTNKWHVYMTKD--------------G--RIS 386 (410)
Q Consensus 333 ~l~~~l~~~~g~~~~~~~~~~-------~~~~~~~--~~~~~~~~~-~ll~~~gi~v~~~--------------g--Ris 386 (410)
++.+.|+ ++.. +++..+ ..++..+ .+.+.+.+. .|.+++||.+..| + |+|
T Consensus 320 ~l~~~L~-~~~g---~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS 395 (424)
T PLN02855 320 YLYEKLS-SVPG---VRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARAS 395 (424)
T ss_pred HHHHHHh-cCCC---EEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEE
Confidence 9999887 6621 233321 1233322 244555444 4444449998753 1 999
Q ss_pred ecC-CCcccHHHHHHHHHHHhhhc
Q 015283 387 LAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 387 ~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.. .|++|++++++.|++++..+
T Consensus 396 ~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 396 LYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred eccCCCHHHHHHHHHHHHHHHHHH
Confidence 764 38899999999999988653
No 146
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=2.2e-23 Score=197.54 Aligned_cols=317 Identities=12% Similarity=0.066 Sum_probs=201.7
Q ss_pred CCcccccHHHHHHHHHhhccCCCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283 48 ELQPYVLDVVKKAENLMLERGENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126 (410)
Q Consensus 48 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~ 126 (410)
.|.+++++.+.+++.+.+.. ..|.. ..-.+++++.+++++... .++.+++ +.+|++++..+. ...+.
T Consensus 5 ~~~~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~g~~-----~~~~~~~--~~~~t~al~~~~--~~~~~ 72 (356)
T cd06451 5 PGPSNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVFQTE-----NGLTFLL--SGSGTGAMEAAL--SNLLE 72 (356)
T ss_pred CCCcCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHhcCC-----CCCEEEE--ecCcHHHHHHHH--HHhCC
Confidence 35556689999998665422 22321 112557788888886432 1344667 888899998873 34467
Q ss_pred CCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283 127 PGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 204 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~ 204 (410)
+||+|+++.++|.. +...++..|++++.++.. .++.+|++++++.+++ .++.++++++|+||||.+.+ +++
T Consensus 73 ~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~---~~~ 145 (356)
T cd06451 73 PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKP--WGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP---LEG 145 (356)
T ss_pred CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecC--CCCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccC---HHH
Confidence 99999999987765 456778899999999873 3467899999999874 25667777899999999776 556
Q ss_pred HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH--
Q 015283 205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS-- 282 (410)
Q Consensus 205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~-- 282 (410)
|.++|+++|+++++|++|. ++.. ...+ . ..+.++++.|.+|.++.| .++||+++ +++.++++..
T Consensus 146 i~~~a~~~~~~li~D~~~~-~g~~-----~~~~---~-~~~~d~~~~s~~K~l~~p-~g~G~l~~---~~~~~~~~~~~~ 211 (356)
T cd06451 146 IGALAKKHDALLIVDAVSS-LGGE-----PFRM---D-EWGVDVAYTGSQKALGAP-PGLGPIAF---SERALERIKKKT 211 (356)
T ss_pred HHHHHHhcCCEEEEeeehh-ccCc-----cccc---c-ccCccEEEecCchhccCC-CCcceeEE---CHHHHHHHHhcC
Confidence 7777999999999999854 3321 0111 1 113346678899999854 45799865 6776665542
Q ss_pred -HHHh---------hc--cCcccCCChhHH-HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283 283 -QLKR---------LA--RPMYSNPPVHGA-RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 349 (410)
Q Consensus 283 -~~~~---------~~--~~~~~~~~~~~~-~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 349 (410)
.... .. ...+.+++...+ .++...++. +. ...+++..++.+++++++.+.|. ..|. .
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~--l~---~~~~~~~~~~~~~~~~~l~~~L~-~~g~----~ 281 (356)
T cd06451 212 KPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDL--IL---EEGLENRWARHRRLAKALREGLE-ALGL----K 281 (356)
T ss_pred CCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHH--HH---HhhHHHHHHHHHHHHHHHHHHHH-HcCC----e
Confidence 0000 00 001222233322 222222221 10 12345677888889999999998 7763 3
Q ss_pred cccC---CcceeeecC----CCH-HHHHHhhhcCcEEEcCC------C--eEEecC-CCcccHHHHHHHHHHHhh
Q 015283 350 FILR---QIGMFSFTG----LNK-AQSDNMTNKWHVYMTKD------G--RISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 350 ~~~~---~~~~~~~~~----~~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
...+ ..+.+.|+. .+. ++++++.+++||.+.++ + |++++. .++++++++++.|+++++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 282 LLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred eccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 3221 123333432 233 44556655449999764 2 999864 388999999999998764
No 147
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=4.9e-24 Score=204.95 Aligned_cols=325 Identities=15% Similarity=0.139 Sum_probs=203.8
Q ss_pred eeecCCCcccccHHHHHHHHHhhccCC---CccCcCCcc----cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 43 AYRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g----~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
.++|..+..++|+.+++++.+.+.... ...|....+ .+++|+.+++++... +++|++ ++|+++++
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~------~~~v~~--~~~~t~~l 90 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNAD------PPEVVF--GANATSLT 90 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCC------CCeEEE--eCCHHHHH
Confidence 445555666678999999888764311 123533323 468888888886432 456888 89999988
Q ss_pred HHHHHHHH-HhCCCCEEEEcCCCCcchh----hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 116 RLAAALIE-RYFPGAKVLISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 116 ~~~~~~~~-~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
..+...+. .+.+||+|++++|.|.+.. ..++..|++++.++.. .+++.+|++++++.+.+ ++.++++++|+
T Consensus 91 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~i~~---~~~lv~i~~~~ 166 (397)
T TIGR01976 91 FLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVD-EATGELHPDDLASLLSP---RTRLVAVTAAS 166 (397)
T ss_pred HHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecc-ccCCCcCHHHHHHhcCC---CceEEEEeCCC
Confidence 87644443 3569999999999887643 4456789999988874 33467899999999874 67888889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||||.+.+ +++|+++|+++|+++++|+++.. +.. ...+ ...+.++++.|++|.+| .|+|++++
T Consensus 167 n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~-~~~-----~~~~----~~~~~d~~~~s~~K~~g---~~~G~l~~- 229 (397)
T TIGR01976 167 NTLGSIVD---LAAITELVHAAGALVVVDAVHYA-PHG-----LIDV----QATGADFLTCSAYKFFG---PHMGILWG- 229 (397)
T ss_pred CCCCccCC---HHHHHHHHHHcCCEEEEehhhhc-ccc-----CCCH----HHcCCCEEEEechhhcC---CceEEEEE-
Confidence 99999764 77778889999999999999642 211 0111 12234566789999875 46899865
Q ss_pred eCCchhHHHHHHHHHhhccC-----ccc-CCChh---HHHHHHHHhCChh------hHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 271 CSSSDLAARVKSQLKRLARP-----MYS-NPPVH---GARIVANVVGNPA------LFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~---~~~~a~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
+++.++++.......... ... +++.. +..++...+.+.+ ......+.+++.+++..+.++++.
T Consensus 230 --~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 307 (397)
T TIGR01976 230 --RPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLL 307 (397)
T ss_pred --cHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 777555543321110000 011 12211 2223333332211 111111235677888888999999
Q ss_pred HHhhhccCCCCCcccccC-----Ccceeeec--CCCHHHHHHhhhcCcEEEcCC-----------------C--eEEecC
Q 015283 336 DSLSAKDKSGKDWSFILR-----QIGMFSFT--GLNKAQSDNMTNKWHVYMTKD-----------------G--RISLAG 389 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~ll~~~gi~v~~~-----------------g--Ris~~~ 389 (410)
+.|+ +++. +++..+ .++++.+. +.+...+.+.|+++||.+..+ + |||+..
T Consensus 308 ~~L~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 383 (397)
T TIGR01976 308 VGLS-DLPG---VTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAH 383 (397)
T ss_pred HHHh-cCCC---EEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeec
Confidence 9998 7651 333322 33333221 234444444445569998743 2 998754
Q ss_pred -CCcccHHHHHHHH
Q 015283 390 -LSLAKCEYLADAI 402 (410)
Q Consensus 390 -~~~~~i~~~~~~l 402 (410)
.|++|++++++.|
T Consensus 384 ~~t~~di~~l~~~l 397 (397)
T TIGR01976 384 YNTAEEVDRLLEAL 397 (397)
T ss_pred cCCHHHHHHHHHhC
Confidence 3888999998864
No 148
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=6.5e-24 Score=202.83 Aligned_cols=326 Identities=11% Similarity=0.076 Sum_probs=211.1
Q ss_pred eecCCCcccccHHHHHHHHHhhccC-----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERG-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 118 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~-----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~ 118 (410)
|+|..+.+++++.+++++.+..... ..+.| +..+.+.++++++++.... +. .++++|++ |+|+|+++..+
T Consensus 2 yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~~-~~-~~~~~i~~--t~g~teal~~~ 76 (382)
T TIGR03403 2 YLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKGI-NA-RDLDDIII--TSCATESNNWV 76 (382)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHHc-Cc-CCCCeEEE--eCCHHHHHHHH
Confidence 4677788888899999987776321 11223 3456778888888886432 22 14688999 99999999987
Q ss_pred HHHHH--Hh-CC-CCEEEEcCCCCcchhhh---hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 119 AALIE--RY-FP-GAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 119 ~~~~~--~~-~~-gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
...+. .+ .+ ||+|+++.+.|+.+... ++..|.+++.++.. +++.+|++.+++.+++ ++.++++++|+|
T Consensus 77 ~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~--~~g~~d~~~l~~~i~~---~t~lv~~~~~~n 151 (382)
T TIGR03403 77 LKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN--EQGTITAEQVREAITE---KTALVSVMWANN 151 (382)
T ss_pred HHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC--CCCCCCHHHHHHhccc---CCeEEEEEcccC
Confidence 54331 12 45 47899998777766544 45689999999873 4467899999998875 567888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+++. ++|.++|+++|+++++|+++. ++..+. .+ ...+.++++.|++|.+|++|+ |++++
T Consensus 152 ~tG~~~~~---~~I~~la~~~g~~~ivD~a~~-~g~~~~-----~~----~~~~~D~~~~s~~K~~gp~G~--g~l~v-- 214 (382)
T TIGR03403 152 ETGMIFPI---KEIGEICKERGVLFHTDAVQA-IGKIPV-----DV----QKAGVDFLSFSAHKFHGPKGV--GGLYI-- 214 (382)
T ss_pred CCccccCH---HHHHHHHHHcCCEEEEechhh-cCCCcc-----Cc----cccCCCEEEEcchhhCCCCce--EEEEE--
Confidence 99998875 567777999999999999955 331101 11 122345888999999888885 77754
Q ss_pred CCchhHHHHHHHHHh---hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283 272 SSSDLAARVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 348 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 348 (410)
++.. .+...+.. .......+++..++.++...++. ..+.++..++++++.++++.+.|+ +++. +
T Consensus 215 -r~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~------~~~~~~~~~~~~~~l~~~l~~~L~-~~~~---~ 281 (382)
T TIGR03403 215 -RKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL------ANEYLDFEKSHVRRLRDRLEDALL-ELPD---V 281 (382)
T ss_pred -CCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHh-cCCC---E
Confidence 2221 01111100 00001123444444344433321 123356777889999999999998 7642 3
Q ss_pred ccccCC----cc--eeeecCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCccc
Q 015283 349 SFILRQ----IG--MFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSLAK 394 (410)
Q Consensus 349 ~~~~~~----~~--~~~~~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~~~ 394 (410)
.+..+. .+ .|.+.+.+.+.+.+.|.++||.++.| + |+|+.. .|++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~d 361 (382)
T TIGR03403 282 FVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEE 361 (382)
T ss_pred EEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHH
Confidence 444332 11 22333445555444456679999842 2 999775 48899
Q ss_pred HHHHHHHHHHHhhhc
Q 015283 395 CEYLADAIIDSYHNV 409 (410)
Q Consensus 395 i~~~~~~l~~~l~~~ 409 (410)
++++++.|+++++++
T Consensus 362 id~~~~~l~~~~~~~ 376 (382)
T TIGR03403 362 IDYTIEVFKKAVQRL 376 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987653
No 149
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=2.5e-23 Score=199.99 Aligned_cols=329 Identities=14% Similarity=0.084 Sum_probs=204.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
.++++|+.++|+.... +|.+++++.+++.. +. ...|.......+|++.+++++. . +..++
T Consensus 45 ~~~~~~~sn~ylgl~~----~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g-~------~~~l~--- 110 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQ----HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG-K------ESALV--- 110 (402)
T ss_pred eeEEEeEccCcCCCCC----CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC-C------CeEEE---
Confidence 4689999998864444 47777777766643 11 0112233446789999999863 2 23344
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEe
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH 186 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~ 186 (410)
+++|++++..+..++....+|+.|+.....|......+...|.++..++. .|++++++.++... ++++++++
T Consensus 111 ~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~ 183 (402)
T TIGR01821 111 FTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAF 183 (402)
T ss_pred ECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 47788888877544432336777777666776666666667766544433 36777877776432 25678888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G 265 (410)
++|+||||.+.+ +++|.++|++||+++|+||+|....+++... ++....+. ...+++++||||.+|.+| |
T Consensus 184 e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~---g~~~~~~~~~~~div~~t~sKa~g~~G---G 254 (402)
T TIGR01821 184 ESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGG---GIAERDGLMHRIDIIEGTLAKAFGVVG---G 254 (402)
T ss_pred cCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCC---ccchhccCCCCCeEEEEechhhhccCC---c
Confidence 999999999776 6677778999999999999987332221111 11111111 124688899999999877 8
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|++. ++++++.+........ ...+.+..++.++...|+.. .+ ....+++.+++++++.+.|+ ++|.
T Consensus 255 ~i~~---~~~~~~~l~~~~~~~~--~t~~~~~~~~aaa~aaL~~~------~~-~~~~~~~~~~~~~~l~~~L~-~~g~- 320 (402)
T TIGR01821 255 YIAA---SRKLIDAIRSYAPGFI--FTTSLPPAIAAGATASIRHL------KE-SQDLRRAHQENVKRLKNLLE-ALGI- 320 (402)
T ss_pred eeec---CHHHHHHHHHhCcCce--ecCcCCHHHHHHHHHHHHHh------hc-CHHHHHHHHHHHHHHHHHHH-HcCC-
Confidence 8633 7776655543221111 11233443444443333321 11 13445566788888999998 8773
Q ss_pred CCcccccCCcceee-ecCC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 346 KDWSFILRQIGMFS-FTGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 346 ~~~~~~~~~~~~~~-~~~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
....+.+++.. .++. ..++.+++++++||.+.+. | ||++.. .++++++++++.|+++++++
T Consensus 321 ---~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 321 ---PVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred ---CcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 44445444332 2232 1234566666679998652 2 888753 48999999999999998764
No 150
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.93 E-value=3.5e-23 Score=199.43 Aligned_cols=328 Identities=14% Similarity=0.086 Sum_probs=204.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
.++++|+.++|+ |... +|.+.+++.+.+... . ...|.+.....++++.+++++. . ++.+++
T Consensus 46 ~~~~~~~s~dyl---gl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~------~~~~~~-- 112 (407)
T PRK09064 46 REVTVWCSNDYL---GMGQ-HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-K------EAALVF-- 112 (407)
T ss_pred ceEEEEECCCCc---CCCC-CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-C------CcEEEE--
Confidence 468899988774 4333 577888887766331 1 1123344557789999998853 2 344554
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEe
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH 186 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~ 186 (410)
++|++++..+..++....+++.|+.....|......+...|.++..++. .|++++++.++... ++++++++
T Consensus 113 -~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~ 184 (407)
T PRK09064 113 -TSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAF 184 (407)
T ss_pred -CcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 6677777776444433347776666666666665666666666554443 37788888776432 35678888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G 265 (410)
++++||+|.+.+ +++|.++|++||+++|+||+|....+++.. . .+....+. ...+++++||||.+|++| |
T Consensus 185 ~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g-~--g~~~~~~~~~~~div~~t~sKa~g~~G---G 255 (407)
T PRK09064 185 ESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRG-G--GIAERDGLMDRIDIIEGTLAKAFGVMG---G 255 (407)
T ss_pred eCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCC-C--ChHHhcCCCCCCeEEEEecchhhhccC---c
Confidence 999999999665 667777799999999999998732222111 1 11111111 134788999999999877 8
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|++. ++++++.+........ .....+..++.++...++ +. +.....+++++++++++.+.|+ +.|
T Consensus 256 ~~~~---~~~~~~~l~~~~~~~~--~t~~~~~~~~~aa~~al~---~~----~~~~~~~~~~~~~~~~l~~~L~-~~g-- 320 (407)
T PRK09064 256 YIAG---SAALVDAVRSYAPGFI--FTTSLPPAIAAAALASIR---HL----KESNEERERHQERAAKLKAALD-AAG-- 320 (407)
T ss_pred eEec---CHHHHHHHHHhCcccc--ccCcCCHHHHHHHHHHHH---HH----hcCHHHHHHHHHHHHHHHHHHH-HcC--
Confidence 8643 7776665543222111 112233333333333332 11 1112346788889999999998 877
Q ss_pred CCcccccCCcceeeec--CC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 346 KDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 346 ~~~~~~~~~~~~~~~~--~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
++...+.+. ++.+ +. ..++.+++++++||.+.+. | ||++.. .+++|++++++.|++++.+
T Consensus 321 --~~~~~~~~~-iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 321 --IPVMPNESH-IVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred --CCCCCCCCC-EEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 344444443 3333 32 1234566766679998641 2 888753 4899999999999998865
Q ss_pred c
Q 015283 409 V 409 (410)
Q Consensus 409 ~ 409 (410)
+
T Consensus 398 ~ 398 (407)
T PRK09064 398 L 398 (407)
T ss_pred c
Confidence 4
No 151
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.93 E-value=1.7e-23 Score=200.89 Aligned_cols=328 Identities=16% Similarity=0.090 Sum_probs=205.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|.--+..|+. +|.+.+++.+.+... ....+....-..++.+.++++. + .+.+.+ +++|+
T Consensus 40 ~~~iD~~~~~~~~~lGh~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~sGs 107 (403)
T PRK05093 40 KEYIDFAGGIAVTALGHC--HPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT----F----AERVFF--ANSGA 107 (403)
T ss_pred CEEEEcCcCHHhccCCCC--CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC----C----CCEEEE--eCchH
Confidence 468999877332344653 688888888877542 1111111112235555555542 1 257888 89999
Q ss_pred hHHHHHHHHHHHhC------CCCEEEEcCCCCcchhh-hhhhCC------------CCccceeeecCCCcccChhhHHHH
Q 015283 113 GSLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 113 ~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
+|++.+.++.+.+. ..++|+..+-+|.+... .+...| .++..++. .|++.+++.
T Consensus 108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 180 (403)
T PRK05093 108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAV 180 (403)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHH
Confidence 99999988776552 23578888877665432 222111 11222221 278888888
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 174 IKAAPGGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
+.+ ++++++++ |.||+|.++ +.+.+++|.++|++||+++|+||+|.++++.+ ..+.... ....++ +.
T Consensus 181 l~~---~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~-~~~~pd---i~ 249 (403)
T PRK05093 181 IDD---HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG---DLFAYMH-YGVTPD---IL 249 (403)
T ss_pred hcC---CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchhhhh-cCCCCC---EE
Confidence 864 56666655 788887765 88999999999999999999999999887542 1222111 111123 45
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
||||.++ +|+|+||++. ++++++.+ .......+.+.+.+.|.++...|+... ..+..+++++++
T Consensus 250 s~sK~l~-~G~rig~vv~---~~~i~~~l----~~~~~~~t~~~~~~~~~aa~a~L~~~~--------~~~~~~~~~~~~ 313 (403)
T PRK05093 250 TSAKALG-GGFPIGAMLT---TAEIASHF----KVGTHGSTYGGNPLACAVAEAVFDIIN--------TPEVLEGVKARR 313 (403)
T ss_pred Eeccccc-CCcceEEEEE---cHHHHhhc----CCCCCCCCCCCCHHHHHHHHHHHHHHh--------hccHHHHHHHHH
Confidence 8999999 8999999855 77744443 322222233455566666655442110 024457788888
Q ss_pred HHHHHHhhhccCCCCCcccccCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC----eEEecCC-CcccHHHHH
Q 015283 332 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----RISLAGL-SLAKCEYLA 399 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g----Ris~~~~-~~~~i~~~~ 399 (410)
+++.+.|+ +++....+....+..|.+.|+.+ ..+++.++++ .||.+.++| ||+++.. +++++++++
T Consensus 314 ~~l~~~L~-~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~-~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~ 391 (403)
T PRK05093 314 QRFVDGLQ-KINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAE-EGVMVLVAGPDVLRFAPSLVIEEADIDEGL 391 (403)
T ss_pred HHHHHHHH-HHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHH-CCeEEecCCCCEEEEeCCCCCCHHHHHHHH
Confidence 88888887 76421111223345577777644 2345667766 599999865 8875543 899999999
Q ss_pred HHHHHHhhhc
Q 015283 400 DAIIDSYHNV 409 (410)
Q Consensus 400 ~~l~~~l~~~ 409 (410)
++|++++..+
T Consensus 392 ~~l~~~l~~~ 401 (403)
T PRK05093 392 ARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHh
Confidence 9999988653
No 152
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.92 E-value=5.8e-23 Score=196.80 Aligned_cols=323 Identities=13% Similarity=0.041 Sum_probs=211.6
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
|+..+++.+.+++...... |. ..+..++.+++.+.+...++... .+.+++ +++||+++..+ +...+.+|
T Consensus 16 GP~~~~~~V~~a~~~~~~~-----~~-~~~~~~~~~~~~~~l~~~~g~~~-~~~vi~--~~~gt~a~~~a--~~~~~~~G 84 (401)
T PLN02409 16 GPVNIPERVLRAMNRPNED-----HR-SPAFPALTKELLEDVKYIFKTKS-GTPFIF--PTTGTGAWESA--LTNTLSPG 84 (401)
T ss_pred CCCCCCHHHHHHhcCCCCC-----CC-CHHHHHHHHHHHHHHHHHhCCCC-CCEEEE--eCCcHHHHHHH--HHhcCCCC
Confidence 5566789999988664311 21 23445666666665555444421 234666 78889998887 44457799
Q ss_pred CEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283 129 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 129 d~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~~~~~l~~i 205 (410)
|+|++++++|.+. ...++..|.+++.++.. .+..+|++.+++.+++.. ++++++++++++||||.+++.+++.++
T Consensus 85 d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l 162 (401)
T PLN02409 85 DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESP--WGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKL 162 (401)
T ss_pred CEEEEeCCCchhHHHHHHHHHcCCceEEEECC--CCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHH
Confidence 9999999888655 46677889999999873 334578999999987521 257778889999999999988877777
Q ss_pred HHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHH-
Q 015283 206 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL- 284 (410)
Q Consensus 206 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~- 284 (410)
++ |+++|+++|+|++++ ++..+.+. ...+.++++.|.+|.++.| .++||+++ +++.++++....
T Consensus 163 ~~-~~~~g~~~vvD~v~s-~g~~~id~---------~~~~~D~~~~s~~K~l~~P-~G~G~l~~---~~~~~~~~~~~~~ 227 (401)
T PLN02409 163 LD-CAQHPALLLVDGVSS-IGALDFRM---------DEWGVDVALTGSQKALSLP-TGLGIVCA---SPKALEASKTAKS 227 (401)
T ss_pred Hh-hhccCcEEEEEcccc-cCCccccc---------cccCccEEEEcCccccCcC-CCcceeEE---CHHHHHHHhcCCC
Confidence 77 999999999999965 33211111 1223457778889998643 36899866 777666654210
Q ss_pred -----------Hhh-ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 285 -----------KRL-ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 285 -----------~~~-~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
... ....+. +++...+.++...++.- ....+++++++.+++++++.+.|+ ++|+ ++.
T Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~-----~~~G~e~i~~~~~~l~~~l~~~L~-~~g~----~~~ 297 (401)
T PLN02409 228 PRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLI-----FEEGLENVIARHARLGEATRLAVE-AWGL----KLC 297 (401)
T ss_pred CCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHH-HcCC----eec
Confidence 000 000112 33333333333332211 123467888999999999999998 8874 332
Q ss_pred cC----Ccceeeec----CCCH-HHHHHhhhcCcEEEcCC-----C---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 352 LR----QIGMFSFT----GLNK-AQSDNMTNKWHVYMTKD-----G---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 352 ~~----~~~~~~~~----~~~~-~~~~~ll~~~gi~v~~~-----g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+ ..+...++ +.+. ++...+++++||.+.+| + ||+..+ .+.+++..++++|.++++++
T Consensus 298 ~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 298 TKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred cCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 22 12222222 3344 45567778889999876 2 998444 58899999999999998764
No 153
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=1.4e-23 Score=201.99 Aligned_cols=320 Identities=13% Similarity=0.066 Sum_probs=202.0
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
++++++.|.+ ++++ |+.+.++..+. .. ...|.+ ..|..++++++++++.+.++.+ .+++.+ +.
T Consensus 21 ~~~~l~~g~~----~~~~-p~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~--~~ 88 (398)
T cd00613 21 SMSFLGSGTY----KHNP-PAVIKRNILEN--EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASL--QD 88 (398)
T ss_pred Cccccccccc----CCcC-cHHHHHHhccc--cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceec--cC
Confidence 5689999998 6653 45555545554 22 245655 6899999999999988776653 346666 56
Q ss_pred ChhhHHHHHHHHHHHhCC--CCEEEEcCCCCcchhhhhhhCC----CCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283 110 SGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFNDAR----VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~~--gd~Vl~~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 183 (410)
+|+.+.+.+. ....+.+ ||.|++++|.|+.+...+...| .+++.+++. +++.+|++.+++.+.+ ++++
T Consensus 89 ~g~~~~~~~~-~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~t~~ 162 (398)
T cd00613 89 EATAAAEAAG-LAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVSE---EVAA 162 (398)
T ss_pred chHHHHHHHH-HHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcCC---CeEE
Confidence 5554444332 2223445 9999999999999988887766 888888873 3457899999998864 6777
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc---
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY--- 260 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~--- 260 (410)
+++++|+ |||.+. +.+++|.++|++||+++|+|+++...... ... ...+.+++++|++|.+ .|
T Consensus 163 viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~-~~~---------~~~~~d~~~~s~~K~~-~p~g~ 228 (398)
T cd00613 163 LMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL-KPP---------GEYGADIVVGNLQKTG-VPHGG 228 (398)
T ss_pred EEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC-CCh---------HHcCCCEEEeeccccC-CCCCC
Confidence 7777775 899973 34699999999999999999986432211 111 1224678999999998 45
Q ss_pred -CCCcceEEEEeCCchhHHHHHHHHH--------------------------hhccCcccCCChhHHHHHHHHhCChhhH
Q 015283 261 -AERIGAMNVVCSSSDLAARVKSQLK--------------------------RLARPMYSNPPVHGARIVANVVGNPALF 313 (410)
Q Consensus 261 -G~r~G~l~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 313 (410)
|+|+||+++ ++++++.+..... ....+++...+...+.++..+....
T Consensus 229 Ggp~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~--- 302 (398)
T cd00613 229 GGPGAGFFAV---KKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG--- 302 (398)
T ss_pred CCCceeEEEE---hhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC---
Confidence 799999865 6665444211000 0000011111122222222221111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee--eecCCC-------HHHHHHhhhcCcEEEcC---
Q 015283 314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGLN-------KAQSDNMTNKWHVYMTK--- 381 (410)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~ll~~~gi~v~~--- 381 (410)
.+.+++++++++++++++.+.|+ +++. .. .+.+..+ +++.+. .+++..|++ +||.+..
T Consensus 303 ---~~g~~~~~~~~~~~~~~l~~~L~-~~~~----~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~-~gi~~~~~~~ 372 (398)
T cd00613 303 ---PEGLKEIAERAHLNANYLAKRLK-EVGG----VL-PFNGPFFHEFVLRLPPLYGIRAEDLAKALID-GGFHAPTMYL 372 (398)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHH-hcCC----cc-cCCCCeeEEEEEEcCCcchHHHHHHHHhhhh-cCcccccccc
Confidence 22346788999999999999998 7763 21 1222222 233221 234556655 6988754
Q ss_pred -C-C--eEEecC-CCcccHHHHHHHH
Q 015283 382 -D-G--RISLAG-LSLAKCEYLADAI 402 (410)
Q Consensus 382 -~-g--Ris~~~-~~~~~i~~~~~~l 402 (410)
+ + |+++.. .|++|++++++.|
T Consensus 373 ~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 373 PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 2 2 888654 4899999998764
No 154
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=7e-23 Score=193.59 Aligned_cols=325 Identities=17% Similarity=0.154 Sum_probs=222.7
Q ss_pred eecCCCcccccHHHHHHHHHhhcc----CCCccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLER----GENKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
|+|+...++.|..+.+++.+.+.. .+...|.. ..-+++.|+.++++++... .++|++ |.|+|+++
T Consensus 25 ylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~-----~~eIvf--t~~tT~al 97 (405)
T COG0520 25 YLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADS-----SDEIVF--TRGTTEAL 97 (405)
T ss_pred EecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCC-----CCeEEE--eCChhHHH
Confidence 455666677789999998877622 12122322 2246789999999975541 378999 99999999
Q ss_pred HHHHHHHHH-hCCCCEEEEcCCCCcch----hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 116 RLAAALIER-YFPGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 116 ~~~~~~~~~-~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
++++..+.. +.+||+|++.+-.|.+. ....+..|++++.+|+. +++.++.+.++..+++ +++++.++..+
T Consensus 98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~---~Tklvais~vS 172 (405)
T COG0520 98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITP---KTKLVALSHVS 172 (405)
T ss_pred HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCC---CceEEEEECcc
Confidence 998654433 57999999999888655 44555679999999983 6678999999998875 89999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc-cccccCCCcceEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK-NLGLYAERIGAMNV 269 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK-~~~~~G~r~G~l~~ 269 (410)
|.||+ ..++++|+++|+++|+++++|.+++ ....+.+ .+..+.++++.|-.| .+|+.| +|.+++
T Consensus 173 n~tG~---~~pv~~I~~la~~~ga~v~VDaaq~-~~h~~id---------v~~l~~Df~afsgHKwl~gP~G--iGvLy~ 237 (405)
T COG0520 173 NVTGT---VNPVKEIAELAHEHGALVLVDAAQA-AGHLPID---------VQELGCDFLAFSGHKWLLGPTG--IGVLYV 237 (405)
T ss_pred ccccc---cchHHHHHHHHHHcCCEEEEECccc-cCccCCC---------chhcCCCEEEEcccccccCCCc--eEEEEE
Confidence 99999 5557788888999999999999944 3321111 234468899999999 777667 578766
Q ss_pred EeCCchhHHHHHHHHHh-----------------hccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 270 VCSSSDLAARVKSQLKR-----------------LARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
.+++.+.+...... .-..+..+.+.+.+.+. ...++ +.. .-.++++.++.+++.
T Consensus 238 ---r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~---~~~--~ig~~~i~~~e~~L~ 309 (405)
T COG0520 238 ---RKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALD---YLL--EIGMEAIEAHERELT 309 (405)
T ss_pred ---chHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHH---HHH--HHhHHHHHHHHHHHH
Confidence 77866655221100 00001112333333322 22221 111 122568888889999
Q ss_pred HHHHHHhhhccCCCCCcccccC----Ccceeee--cCCCHHHHHHhhhcCcEEEcCCC----------------eEEecC
Q 015283 332 QKLFDSLSAKDKSGKDWSFILR----QIGMFSF--TGLNKAQSDNMTNKWHVYMTKDG----------------RISLAG 389 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~~----~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~g----------------Ris~~~ 389 (410)
+++.+.|+ +++. +.+..+ ..+.+.| .+.++..+...|.++||.++.|. |+|++.
T Consensus 310 ~~~~~~L~-~~~~---v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~ 385 (405)
T COG0520 310 EYLLEGLS-ELPG---VEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHL 385 (405)
T ss_pred HHHHHHHh-cCCC---eEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEee
Confidence 99999998 7763 344433 3455544 35566666555566789998771 888664
Q ss_pred -CCcccHHHHHHHHHHHhh
Q 015283 390 -LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 390 -~~~~~i~~~~~~l~~~l~ 407 (410)
.|++|++++++.|+++.+
T Consensus 386 YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 386 YNTEEDVDRLLEALKKALA 404 (405)
T ss_pred cCCHHHHHHHHHHHHHHhh
Confidence 399999999999998864
No 155
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=8.7e-23 Score=195.63 Aligned_cols=325 Identities=11% Similarity=0.110 Sum_probs=204.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|..-...|+. +|.+.+++.+.++.. +...+.......++.+.++++. + .+.+.+ +++|+
T Consensus 40 ~~~lD~~~g~~~~~lGh~--~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~SGs 107 (396)
T PRK04073 40 NRYMDMLSAYSAVNQGHR--HPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT----G----KDMVLP--MNTGA 107 (396)
T ss_pred CEEEEcCCCHHhccCCCC--CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC----C----CCeEEE--cCChH
Confidence 467888777542344554 588888888877542 1111222233445666666652 1 257888 89999
Q ss_pred hHHHHHHHHHHHhC-------CC-CEEEEcCCCCcchh-hhhhhCCCC------------ccceeeecCCCcccChhhHH
Q 015283 113 GSLRLAAALIERYF-------PG-AKVLISSPTWGNHK-NIFNDARVP------------WSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 113 ~a~~~~~~~~~~~~-------~g-d~Vl~~~p~y~~~~-~~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~ 171 (410)
+|++.+.++.+.+. +| ++|+...-+|.+.. ..+...+.. +..++. .|++.++
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 180 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALK 180 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHH
Confidence 99999988776541 34 67888877665543 332222211 111221 2778888
Q ss_pred HHHhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 172 ADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
+.+.+ +++++++++++||||.+++.+ .+++|.++|++||+++|+||+|.+++.. ...+... ..+..++++
T Consensus 181 ~~i~~---~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~---g~~~~~~-~~~~~pdi~-- 251 (396)
T PRK04073 181 AAITP---NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRT---GKLFACD-WDNVTPDMY-- 251 (396)
T ss_pred Hhccc---CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcC---cHHHHhh-hcCCCCCEE--
Confidence 88864 678888899999999998765 5999999999999999999999988643 1222211 112223333
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
++||.+|.+|+|+||+++ ++++.+.+ .......+.+.+.+++.++...|+.. .+ +...++.+++
T Consensus 252 -~~sK~lg~gg~~ig~~~~---~~~i~~~~----~~~~~~~t~~~~~~~~aaa~aaL~~~------~~--~~l~~~~~~~ 315 (396)
T PRK04073 252 -ILGKALGGGVFPISCVAA---NRDILGVF----TPGSHGSTFGGNPLACAVSIAALEVL------EE--EKLPERSLEL 315 (396)
T ss_pred -EecccccCCCCcceEEEE---cHHHHhhh----cCCCCCCCCCCCHHHHHHHHHHHHHH------Hh--cCHHHHHHHH
Confidence 589999988899999855 77755443 22222222345566666665555311 00 1334566677
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecCC--C-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAI 402 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l 402 (410)
++++.+.|+ +++.+. +....+. |.|+++.+ + .++..++++ +||.+.+.+ ||+.+ ..+++++++++++|
T Consensus 316 ~~~l~~~L~-~l~~~~-i~~~~~~-g~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l 391 (396)
T PRK04073 316 GEYFKEQLK-EIDNPM-IKEVRGR-GLFIGVELNEPARPYCEALKE-EGLLCKETHETVIRFAPPLVITKEELDWAFEKI 391 (396)
T ss_pred HHHHHHHHH-hhcCCc-ccceecc-eEEEEEEecchHHHHHHHHHH-CCeEEecCCCCEEEEECCcccCHHHHHHHHHHH
Confidence 888888888 764211 2333344 55665544 2 344566655 699998753 88853 24999999999999
Q ss_pred HHHh
Q 015283 403 IDSY 406 (410)
Q Consensus 403 ~~~l 406 (410)
++++
T Consensus 392 ~~~l 395 (396)
T PRK04073 392 KAVL 395 (396)
T ss_pred HHHh
Confidence 9875
No 156
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.92 E-value=9.9e-23 Score=193.01 Aligned_cols=316 Identities=17% Similarity=0.107 Sum_probs=201.0
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
|+..+++.+.+++..... .....|. .-..++|+.+++++.... +...|++ +.||++++..+ +...+.+|
T Consensus 6 ~p~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~la~~~~~~~----~~~~i~~--~~~gt~~l~~~--~~~~~~~~ 74 (355)
T TIGR03301 6 GPLSTSATVRDAMLVDWC-HWDSEFN--DVTDQVRDRLLALAGGDD----NHTCVLL--QGSGTFAVEAT--IGSLVPRD 74 (355)
T ss_pred CCCCCCHHHHHHhhhhcc-CCCHHHH--HHHHHHHHHHHHHhcCCC----CCcEEEE--eCCcHHHHHHH--HHhccCCC
Confidence 334457888888877321 1112342 346688888888864431 1235667 89999999998 34446678
Q ss_pred CEEEEcCC-CCcc-hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 129 AKVLISSP-TWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 129 d~Vl~~~p-~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
|+|++..+ .|+. +...++..|.+++.++. ++++.+|++.+++.++++ ++..++++++++||||...+ +++|+
T Consensus 75 ~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~---~~~i~ 148 (355)
T TIGR03301 75 GKLLVLINGAYGERLAKICEYLGIPHTDLNF--SEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILNP---LEAIA 148 (355)
T ss_pred CeEEEECCCchhhHHHHHHHHcCCceEEEec--CCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchhH---HHHHH
Confidence 88776655 4544 45667788999998887 345678999999998763 34556667889999999554 77888
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLK 285 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 285 (410)
++|++||+++|+|++++ ++.. + ..+ ...+.+++++|++|.+ |++| +||+++ +++.++++.....
T Consensus 149 ~l~~~~~~~livD~~~s-~g~~--~---~~~----~~~~~d~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~~~~~~ 213 (355)
T TIGR03301 149 KVARSHGAVLIVDAMSS-FGAI--P---IDI----EELDVDALIASANKCLEGVPG--FGFVIA---RRDLLEASAGNAR 213 (355)
T ss_pred HHHHHcCCEEEEEeccc-cCCc--c---cch----hhcCccEEEecCCcccccCCc--eeEEEE---CHHHHHHhhCCCC
Confidence 88999999999998754 3321 1 111 1224568899999986 5556 599866 7776666541000
Q ss_pred -----------hh--ccCcccCCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 286 -----------RL--ARPMYSNPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 286 -----------~~--~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
.. ......+++...+.++...++. + ..+. +++.+++++++++++.+.|+ ++|. .+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~--~---~~~g~~~~~~~~~~~~~~~~~~~L~-~~g~----~~~ 283 (355)
T TIGR03301 214 SLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEE--L---EAEGGVPARIARYRRNRELLVDGLR-ALGF----QPL 283 (355)
T ss_pred CceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHH--H---HHcccHHHHHHHHHHHHHHHHHHHH-HcCC----eee
Confidence 00 0111123444443433333321 1 0111 45677788999999999998 8773 322
Q ss_pred cC---CcceeeecCC------CHHHHHHhhhcCcEEEcCCC-------eEEe-cCCCcccHHHHHHHHHHHh
Q 015283 352 LR---QIGMFSFTGL------NKAQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 352 ~~---~~~~~~~~~~------~~~~~~~ll~~~gi~v~~~g-------Ris~-~~~~~~~i~~~~~~l~~~l 406 (410)
.+ .++.++|+.+ +.+.+.+.+++.||.+.+++ ||++ ...++++++++++.|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 284 LPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred cCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 22 2344444432 22344444455699998863 9986 3458899999999998864
No 157
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=4.8e-23 Score=195.96 Aligned_cols=319 Identities=14% Similarity=0.036 Sum_probs=202.7
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
|+..+++.+++++.+.. ......|. .-..++|+.+++++... -+.+.+++ +.+|+.++..+ +.+.+.+|
T Consensus 12 gP~~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~~~----~~~~~i~~--~~~gt~~l~~~--~~~l~~~~ 80 (368)
T PRK13479 12 GPLTTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIATGE----EGYTCVPL--QGSGTFSVEAA--IGSLVPRD 80 (368)
T ss_pred CCCCCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhCCC----CCceEEEE--cCCcHHHHHHH--HHhccCCC
Confidence 44445788888876643 21112242 35678888888886532 11244767 89999999998 44456799
Q ss_pred CEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 129 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 129 d~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
|.|+++.++|.+. ...++..|++++.++.. .++.+|++++++.+++. ++.+++.+++|+||||...+ +++|.
T Consensus 81 ~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~---~~~i~ 154 (368)
T PRK13479 81 GKVLVPDNGAYGARIAQIAEYLGIAHVVLDTG--EDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILNP---LDEIA 154 (368)
T ss_pred CeEEEEeCCchHHHHHHHHHHcCCcEEEEECC--CCCCCCHHHHHHHHHhC-CCCcEEEEEcccCccccccC---HHHHH
Confidence 9999988877655 36778899999999873 44678999999988752 34556667999999999766 56777
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLK 285 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 285 (410)
++|+++|+++|+|++ +.++..+ ..+ ...+..+++.|++|.+ |++| +||+++ +++.++++.....
T Consensus 155 ~l~~~~~~~livDa~-~~~g~~~-----~~~----~~~~~d~~v~s~~K~l~g~~G--~G~l~~---~~~~~~~~~~~~~ 219 (368)
T PRK13479 155 AVAKRHGKRLIVDAM-SSFGAIP-----IDI----AELGIDALISSANKCIEGVPG--FGFVIA---RRSELEACKGNSR 219 (368)
T ss_pred HHHHHcCCEEEEEcc-cccCCcc-----ccc----cccCceEEEecCccccccCCC--ceEEEE---CHHHHHHhhcCCC
Confidence 779999999999955 5555321 111 1112447778999965 6777 599866 7776665443110
Q ss_pred h--------h-----ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 286 R--------L-----ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 286 ~--------~-----~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
. . ......+++.....++...+.. +.+ ...+++..++++++++++.+.|+ ++|+ ....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~--l~~--~~~~~~~~~~~~~~~~~l~~~L~-~~g~----~~~~ 290 (368)
T PRK13479 220 SLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLE--LEE--EGGVPARGARYANNQRTLVAGMR-ALGF----EPLL 290 (368)
T ss_pred CeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHH-HcCC----cccC
Confidence 0 0 0001012332222222222211 000 01235667888999999999998 8874 3221
Q ss_pred C---C--cceeeecC----CCH-HHHHHhhhcCcEEEcCCC-------eEEe-cCCCcccHHHHHHHHHHHhhhc
Q 015283 353 R---Q--IGMFSFTG----LNK-AQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 353 ~---~--~~~~~~~~----~~~-~~~~~ll~~~gi~v~~~g-------Ris~-~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ . .....+.. .+. ++..++.+ +||.+.++. |++. ...++++++++++.|+++++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 291 DAEIQSPIIVTFHAPADPAYDFKEFYERLKE-QGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CchhcCceEEEEECCCCCCcCHHHHHHHHHH-CCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1 1 11222222 233 34555554 699998752 9984 5568999999999999998764
No 158
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=7.6e-23 Score=195.30 Aligned_cols=316 Identities=13% Similarity=0.029 Sum_probs=200.8
Q ss_pred cccHHHHHHHHHhhccCC-------CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283 52 YVLDVVKKAENLMLERGE-------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER 124 (410)
Q Consensus 52 ~~~~~v~~a~~~~~~~~~-------~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~ 124 (410)
++++.+.+++.+...... ...+.....+.++++.+++++.. +++.+ ++|+++++..+ +...
T Consensus 31 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--------~~~~~--~~g~t~a~~~a--l~~l 98 (387)
T PRK09331 31 ILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--------DEARV--THGAREGKFAV--MHSL 98 (387)
T ss_pred CCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHh
Confidence 347889999888763211 11122233578999999999632 35667 89999999887 4444
Q ss_pred hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEeCCCCCCCCCCCCHH
Q 015283 125 YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPE 200 (410)
Q Consensus 125 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~~~p~NPtG~~~~~~ 200 (410)
+.+||+|+++.++|......++..|++++.++...++++.+|++.+++.+++. .+++.++++++|+||||. ..
T Consensus 99 ~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~---~~ 175 (387)
T PRK09331 99 CKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGN---LA 175 (387)
T ss_pred cCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcc---cc
Confidence 67999999999998877777888999999998732346779999999988752 135778888999999998 55
Q ss_pred HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283 201 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 201 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
++++|+++|+++|+++++|++|.....+ .+ .. ..+.++++.|++|.++ .+.|+||+++ +++.++.+
T Consensus 176 ~l~~I~~la~~~g~~livD~a~~~g~~~-~~-----~~----~~g~D~~~~s~~K~l~-~~~~~G~l~~---~~~~i~~~ 241 (387)
T PRK09331 176 DAKKVAKVAHEYGIPFLLNGAYTVGRMP-VD-----GK----KLGADFIVGSGHKSMA-ASAPSGVLAT---TEEYADKV 241 (387)
T ss_pred cHHHHHHHHHHcCCEEEEECCcccCCcC-CC-----HH----HcCCCEEEeeCccccc-CCCCEEEEEE---CHHHHhhc
Confidence 6888888899999999999997643211 11 11 1235688999999998 4568899755 77766654
Q ss_pred HHHHHhhcc-C--ccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccccc--C
Q 015283 281 KSQLKRLAR-P--MYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFIL--R 353 (410)
Q Consensus 281 ~~~~~~~~~-~--~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~--~ 353 (410)
......+.. . .+. +.+.....++...+. . +.+.. +..++..++.+++.+.|+ ++ | +++.. +
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~--~----~~~~~-~~~~~~~~~~~~l~~~L~-~l~g----~~~~~~~~ 309 (387)
T PRK09331 242 FRTSRKFGVKEVELLGCTLRGAPLVTLMASFP--H----VVERV-KRWDEEVKKARWFVDELE-KIEG----FKQLGEKP 309 (387)
T ss_pred ccccCCCcccceeeeceecCchHHHHHHHHHH--H----HHHHH-HHHHHHHHHHHHHHHHHh-cCCC----EEEeccCc
Confidence 332111100 0 011 111111111111111 1 11222 233444567778888998 88 5 33331 1
Q ss_pred Ccceeeec---CC---------C-HHHHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 354 QIGMFSFT---GL---------N-KAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 354 ~~~~~~~~---~~---------~-~~~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
....+..+ .+ + ..+.+.| +++||...+.+ |+...+.++++++++++.|+++++++
T Consensus 310 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 310 RNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred CcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 11222211 11 1 2244555 45699954433 66654569999999999999987754
No 159
>PRK07049 methionine gamma-lyase; Validated
Probab=99.91 E-value=2.2e-22 Score=192.96 Aligned_cols=225 Identities=17% Similarity=0.138 Sum_probs=159.3
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----h
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~ 146 (410)
.+| +......|++.++++.. .+++++ ++||++++..+ +...+.+||+|++++|+|+.+...+ +
T Consensus 78 ~R~-~~Pt~~~Le~~lA~leg--------~~~~iv--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~ 144 (427)
T PRK07049 78 SRF-NHPNSEIVEDRLAVYEG--------AESAAL--FSSGMSAIATT--LLAFVRPGDVILHSQPLYGGTETLLAKTFR 144 (427)
T ss_pred cCC-CCcCHHHHHHHHHHHhC--------CCcEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHH
Confidence 445 45567899999999952 235666 79999998877 4556789999999999999997654 4
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH---cCCccccccc
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE---KNHIPFFDVA 221 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~---~~~~li~Dea 221 (410)
..|.+++.++. . .|++.+++.+.+. .++++++++++|+||||.+++.+++.+|++.|.. +++++|+||+
T Consensus 145 ~~Gi~~v~~~~--~----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet 218 (427)
T PRK07049 145 NFGVGAVGFAD--G----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT 218 (427)
T ss_pred hcCcEEEEEeC--C----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence 56777655542 1 4667777666431 1367788889999999999999999999888754 6899999999
Q ss_pred CCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHH
Q 015283 222 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300 (410)
Q Consensus 222 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (410)
|..+... . ++ ..+.++++.|+||.++ .+|+|+||++ .++++++++.... .......+...+
T Consensus 219 y~~~~~~----~--pl-----~~g~divv~S~SK~~gG~~glr~G~vv---~~~~l~~~l~~~~----~~~g~~ls~~~a 280 (427)
T PRK07049 219 LLGPVFQ----K--PL-----EHGADLSVYSLTKYVGGHSDLVAGAVL---GRKALIRQVRALR----SAIGTQLDPHSC 280 (427)
T ss_pred ccccccC----C--cc-----ccCCCEEEEcCceeecCCCCcEEEEEE---CCHHHHHHHHHHH----HhcCCCCCHHHH
Confidence 8765421 1 11 1235788999999998 6999999974 3777666655422 222234566666
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.++...|+.- ....++..+++..+.+.|+ +.+
T Consensus 281 ~l~~r~L~tl----------~~R~~~~~~~a~~la~~L~-~~p 312 (427)
T PRK07049 281 WMLGRSLETL----------VLRMERANRNARAVAEFLR-DHP 312 (427)
T ss_pred HHHHcCCChH----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence 6666665532 2334455778888888887 663
No 160
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.91 E-value=8.6e-23 Score=195.93 Aligned_cols=335 Identities=14% Similarity=0.048 Sum_probs=207.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-...|+. +|.+.+++.+++... + ...| ......++.+.+++.. + .+.+.+ +++|
T Consensus 39 ~~~lD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~----~~~v~~--~~sG 105 (406)
T PRK12381 39 KEYIDFAGGIAVNALGHA--HPALREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFF--CNSG 105 (406)
T ss_pred CEEEEcCcCHhhccCCCC--CHHHHHHHHHHHhhcccccCcc-CCHHHHHHHHHHHhhC----C----CCeEEE--cCCc
Confidence 468899886443355665 588998888877542 1 1122 1222345666666552 1 368888 9999
Q ss_pred hhHHHHHHHHHHHhC------CCCEEEEcCCCCcchhhhhhhCCCCcc----ceeeec--CCCcccChhhHHHHHhcCCC
Q 015283 112 TGSLRLAAALIERYF------PGAKVLISSPTWGNHKNIFNDARVPWS----EYRYYD--PKTVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 112 t~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~~~~~~g~~~~----~v~~~~--~~~~~~d~~~l~~~i~~~~~ 179 (410)
++|++.+.++.+.+. +..+|+..+.+|.+........+.... ..++.+ ....-.|++.+++.+.+
T Consensus 106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 182 (406)
T PRK12381 106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD--- 182 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC---
Confidence 999999988876652 447899999988776543322221110 001100 00011378888888864
Q ss_pred CcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 180 GSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++.++++ .|.||+|.+. +.+.+++|.++|++||+++|+||+|.+++..+ ..+.... ....+++ .|+||.+
T Consensus 183 ~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G---~~~~~~~-~~v~pDi---~t~sK~l 254 (406)
T PRK12381 183 QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMH-YGVTPDV---LTTAKAL 254 (406)
T ss_pred CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc---chhhhHh-hCCCCCE---EEehhhh
Confidence 5666664 6899998755 68889999999999999999999998886432 2222211 1112232 4999999
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
+ +|+|+||++. ++++++.+ .......+.+.+.+.+.++...|+-- . .++.+++++++.+++.+.
T Consensus 255 ~-gG~~ig~~~~---~~~~~~~~----~~~~~~~t~~~~pl~~aaa~a~l~~l------~--~~~~~~~~~~~~~~l~~~ 318 (406)
T PRK12381 255 G-GGFPIGAMLT---TEKCASVM----TVGTHGTTYGGNPLASAVAGKVLELI------N--TPEMLNGVKQRHDWFVER 318 (406)
T ss_pred h-CCCceEEEEE---cHHHHhhc----CCCCCCCCCCCCHHHHHHHHHHHHHH------h--hccHHHHHHHHHHHHHHH
Confidence 8 8999999855 67744443 33222223344555555554433211 0 124567788888888888
Q ss_pred hhhccCCCCCcccccCCcceeeecCCC------HHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHh
Q 015283 338 LSAKDKSGKDWSFILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
|+ +++....+....+..|.+.++.+. ...+...+.++||.+.+.+ ||+++. .+++++++++++|++++
T Consensus 319 L~-~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l 397 (406)
T PRK12381 319 LN-TINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFARAC 397 (406)
T ss_pred HH-HHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence 87 664211111122334566555432 1233344445799998654 888764 59999999999999998
Q ss_pred hhc
Q 015283 407 HNV 409 (410)
Q Consensus 407 ~~~ 409 (410)
+++
T Consensus 398 ~~~ 400 (406)
T PRK12381 398 ERF 400 (406)
T ss_pred HHH
Confidence 754
No 161
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=4.4e-23 Score=187.79 Aligned_cols=327 Identities=18% Similarity=0.112 Sum_probs=226.3
Q ss_pred eeecCCCcccccHHHHHHHHHhhccC-----CCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 43 AYRTEELQPYVLDVVKKAENLMLERG-----ENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 43 ~~~~~~~~~~~~~~v~~a~~~~~~~~-----~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
.|+|++.++++.|++.+++..++... ..+.|+ ...-+++.|+.+|+.+... +++|+| |+|||++.
T Consensus 3 iYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~------~~eIiF--TSG~TEsn 74 (386)
T COG1104 3 IYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGAD------PEEIIF--TSGATESN 74 (386)
T ss_pred ccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--ecCCcHHH
Confidence 35788888888999999987776331 223332 1224678899999997554 789999 99999999
Q ss_pred HHHHHHHHH-h-C--CCCEEEEcCCCCcchhhhhhhC---CCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283 116 RLAAALIER-Y-F--PGAKVLISSPTWGNHKNIFNDA---RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188 (410)
Q Consensus 116 ~~~~~~~~~-~-~--~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~ 188 (410)
+++..-... . . .|.+|+++.-.++...+.++.. |.++.+++. ..++.+|+++|++.+++ ++.++-+..
T Consensus 75 NlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V--~~~G~v~~e~L~~al~~---~T~LVSim~ 149 (386)
T COG1104 75 NLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPV--DSNGLVDLEQLEEALRP---DTILVSIMH 149 (386)
T ss_pred HHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCC--CCCCeEcHHHHHHhcCC---CceEEEEEe
Confidence 998543111 2 1 5789999999998887777655 889999988 45788999999999986 788888888
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
.||.||+ ..++++|.++|+++++++.+|.+ +.++--+.+ .....-++...|-+|..|+.| +|+++
T Consensus 150 aNnE~G~---IQpI~ei~~i~k~~~i~fHvDAv-Qa~Gkipi~---------~~~~~vD~ls~SaHK~~GpkG--iGaLy 214 (386)
T COG1104 150 ANNETGT---IQPIAEIGEICKERGILFHVDAV-QAVGKIPID---------LEELGVDLLSFSAHKFGGPKG--IGALY 214 (386)
T ss_pred cccCeee---cccHHHHHHHHHHcCCeEEEehh-hhcCceecc---------ccccCcceEEeehhhccCCCc--eEEEE
Confidence 9999999 56677888889999999999999 666532111 112225677788999999888 58885
Q ss_pred EEeCCch-hHHHHHH--HHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CC
Q 015283 269 VVCSSSD-LAARVKS--QLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KS 344 (410)
Q Consensus 269 ~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~ 344 (410)
+ ++. ..+.+.. -...-.++-+.+.+.++..+.+.-+. .++++....++...|+++.+.|. +. +.
T Consensus 215 v---~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a--------~~~~~~~~~~~~~lr~~l~~~l~-~~~p~ 282 (386)
T COG1104 215 V---RPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIA--------VEELEEENARLRKLRDRLEDGLL-EIIPD 282 (386)
T ss_pred E---CCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-hcCCc
Confidence 4 332 1111110 00111233333444443322222211 33456777888889999999998 65 21
Q ss_pred ---CCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC-----------------C----------eEEecCC-Ccc
Q 015283 345 ---GKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-----------------G----------RISLAGL-SLA 393 (410)
Q Consensus 345 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~-----------------g----------Ris~~~~-~~~ 393 (410)
.+.-..-.|....+.|.++..+.+...|+.+||++..| | |||++.. |++
T Consensus 283 ~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~e 362 (386)
T COG1104 283 VYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEE 362 (386)
T ss_pred EEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHH
Confidence 01001122444556777888888888888889999876 1 9999864 889
Q ss_pred cHHHHHHHHHHHhhhc
Q 015283 394 KCEYLADAIIDSYHNV 409 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~~ 409 (410)
|++++++.++++++++
T Consensus 363 ei~~~~~~l~~~i~~l 378 (386)
T COG1104 363 EIDAAAEALKEIIKRL 378 (386)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 162
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=3e-22 Score=190.71 Aligned_cols=328 Identities=12% Similarity=0.077 Sum_probs=208.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|.. ..+..+ .|++.+++.+++.... .+ +..-..++++++++.+.... ...+.+ +++|++
T Consensus 29 ~~~lD~~s~~~--~~~lG~-~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~~-----~~~~~~--~~SGse 95 (375)
T PRK04260 29 KKYLDFSSGIG--VTNLGF-HPQVQQALQKQAGLIW--HS-PNLYLNSLQEEVAQKLIGDK-----DYLAFF--CNSGAE 95 (375)
T ss_pred CEEEECCCCcc--cccCCC-CHHHHHHHHHHHHhcC--cc-cCccCCHHHHHHHHHHhcCc-----CCEEEE--cCccHH
Confidence 46789987743 222333 5779999888775421 12 11234578889998764421 223567 899999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcch-hhhhhhCCCC---------ccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNH-KNIFNDARVP---------WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~~~~~~~g~~---------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 183 (410)
++..+.++.+.+.++++|++.+.+|.+. ...+...|.+ +..++..+ -.|++.+++.+.+ +..+
T Consensus 96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~dl~~l~~~l~~---~~a~ 168 (375)
T PRK04260 96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FNDLNSVKALVNK---NTAA 168 (375)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCCHHHHHHhcCC---CeEE
Confidence 9999877776666778999988887653 2222222211 11111110 1378888887753 5677
Q ss_pred EEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283 184 LLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 184 ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 262 (410)
+++.+++|++|...+ .+.++++.++|+++|+++|+||+|.+++.. ...+.... ....+++ .||||.++ +|+
T Consensus 169 vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~---g~~~~~~~-~~~~pdi---~t~sK~l~-~G~ 240 (375)
T PRK04260 169 VMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRT---GKLYAFEH-YGIEPDI---FTLAKGLA-NGV 240 (375)
T ss_pred EEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---cchhhhHh-hCCCCCE---EEeccccc-CCc
Confidence 788899999998765 456999999999999999999999887643 22222211 1222343 38999998 799
Q ss_pred CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
|+||+++ ++++.+.+ .......+.+.+.+++.++...|+..+. .+..++.++..+..++.+.+.+. +.
T Consensus 241 ~ig~~~~---~~~~~~~~----~~~~~~~t~~~~~~~~~aa~a~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~-~~ 308 (375)
T PRK04260 241 PVGAMLA---KSSLGGAF----GYGSHGSTFGGNKLSMAAASATLDIMLT----AGFLEQALENGNYLQEQLQKALQ-DK 308 (375)
T ss_pred ceEEEEE---cHHHHhhc----CCCCCCCCCCcCHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHh-hC
Confidence 9999855 66744443 2211222234456666666666643221 22345666666666666666665 54
Q ss_pred CCCCCcccccCCcceeeecCC--CHH-HHHHhhhcCcEEEcCCC----eEEe-cCCCcccHHHHHHHHHHHh
Q 015283 343 KSGKDWSFILRQIGMFSFTGL--NKA-QSDNMTNKWHVYMTKDG----RISL-AGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 343 g~~~~~~~~~~~~~~~~~~~~--~~~-~~~~ll~~~gi~v~~~g----Ris~-~~~~~~~i~~~~~~l~~~l 406 (410)
+. +... +..|+++|+.+ +.. +.+++.+ +||.+.|.+ ||++ ...+++++++++++|++++
T Consensus 309 ~~---~~~~-~~~g~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 309 ET---VTTV-RGLGYMIGIETTADLSQLVEAARD-KGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred CC---eeEE-eccceEEEEEecCcHHHHHHHHHh-CCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 31 1222 23688888864 333 4555554 699998865 8887 4569999999999998764
No 163
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.91 E-value=1.8e-22 Score=191.58 Aligned_cols=319 Identities=14% Similarity=0.023 Sum_probs=200.9
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
|+..+++.+.+++.... ......| ..-.+++|+.+++++.... ..+.|++ |+|||++++.+ +.+.+.+|
T Consensus 10 gp~~~~~~v~~~~~~~~-~~~~~~~--~~~~~~~r~~la~l~~~~~----~~~~i~~--t~~~t~al~~~--~~~l~~~~ 78 (363)
T TIGR02326 10 GPLTTSRTVKEAMLFDW-CTWDSDY--NIVVEQIRQQLLALATAEE----GYTSVLL--QGSGTFAVEAV--IGSAVPKD 78 (363)
T ss_pred CCCCCCHHHHHHhCCCC-CCCChHH--HHHHHHHHHHHHHHhCCCC----CceEEEE--cCCCHHHHHHH--HHhcCCCC
Confidence 55556788888765533 1111112 2235677888888864431 1246888 99999999998 44446688
Q ss_pred CEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 129 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 129 d~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
|.+++..+++.+. ...++..|.+++.+++ ++++.+|++.+++.++.. ++..++.+++++||||+..+ +++|.
T Consensus 79 ~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~---i~~I~ 152 (363)
T TIGR02326 79 GKLLVVINGAYGARIVQIAEYLGIPHHVVDT--GEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILNP---IEAVA 152 (363)
T ss_pred CeEEEEeCChhhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccCc---HHHHH
Confidence 8877766554433 4667889999999987 345678999999998763 23455667888999999776 56888
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLK 285 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 285 (410)
++|+++|+++++|+++ .++..+ ..+ ...+.+++++|++|.+ |++| +||+++ +++.++++.....
T Consensus 153 ~l~~~~g~~livD~~~-~~g~~~-----~~~----~~~~~D~~~~s~~K~l~~p~G--~G~l~~---~~~~~~~~~~~~~ 217 (363)
T TIGR02326 153 KLAHRHGKVTIVDAMS-SFGGIP-----IDI----AELHIDYLISSANKCIQGVPG--FGFVIA---RQAELAACKGNAR 217 (363)
T ss_pred HHHHHcCCEEEEEccc-cccCcc-----cch----hhcCccEEEecCccccccCCc--ceEEEE---CHHHHHHhhcCCC
Confidence 8899999999999884 444211 111 1223468889999987 5556 699865 6666555421100
Q ss_pred -----------hh---ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 286 -----------RL---ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 286 -----------~~---~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
.. .......++...+.++...++. +.. ...+++.+++++++++++.+.|+ ++|+ ...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~--l~~--~g~~~~~~~~~~~~~~~l~~~L~-~~g~----~~~ 288 (363)
T TIGR02326 218 SLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLE--LEK--EGGVAARHQRYQQNQKTLVAGMR-ALGF----EPL 288 (363)
T ss_pred ceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHH-HcCC----eec
Confidence 00 0001112333343433322221 100 01245677899999999999998 8874 222
Q ss_pred cC---Cccee---eecC---CCHHHHHHhhhcCcEEEcCCC-------eEEe-cCCCcccHHHHHHHHHHHhhh
Q 015283 352 LR---QIGMF---SFTG---LNKAQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 352 ~~---~~~~~---~~~~---~~~~~~~~ll~~~gi~v~~~g-------Ris~-~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.+ .++.. .+.+ ++...+.+.++++||.+.++. ||++ +..+.++++++++.|++++.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~~ 362 (363)
T TIGR02326 289 LDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMYW 362 (363)
T ss_pred cCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence 11 23222 2222 233344444455699998872 9985 546899999999999998864
No 164
>PLN02242 methionine gamma-lyase
Probab=99.91 E-value=2.5e-22 Score=191.93 Aligned_cols=219 Identities=15% Similarity=0.120 Sum_probs=154.4
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-----hCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-----DAR 149 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-----~~g 149 (410)
+.....+|++.++++... +..++ ++||++|+..+ +...+.+||+|+++.|.|+.+...+. ..|
T Consensus 74 ~~Pt~~~LE~~lA~l~g~--------~~~l~--~~sG~~Ai~~a--l~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGT--------EAAYC--TASGMSAISSV--LLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCN 141 (418)
T ss_pred CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccC
Confidence 455678999999998533 34556 89999999998 44557899999999999998876653 356
Q ss_pred CCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC
Q 015283 150 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 229 (410)
Q Consensus 150 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 229 (410)
.+++.++. .|++.+++.+++ ++++++++++|+||||.+. ++++|+++|+++|++||+|++|..+.+.
T Consensus 142 ~~~~~~d~-------~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~- 208 (418)
T PLN02242 142 ITTTFVDI-------TDLEAVKKAVVP--GKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLS- 208 (418)
T ss_pred ceEEEcCC-------CCHHHHHHhcCc--CCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCC-
Confidence 66655543 278999888864 2477888899999999966 5778888899999999999999766532
Q ss_pred CCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283 230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308 (410)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~ 308 (410)
.. . ...+++++|+||.++.+|+++ ||++ .++++++++....... ....+++...+.++...+.
T Consensus 209 ------~~-~----~g~divv~S~SK~l~g~g~~~gG~iv---~~~~li~~l~~~~~~~--~~~~g~~~~~~~A~l~~~~ 272 (418)
T PLN02242 209 ------PA-R----LGADVVVHSISKFISGGADIIAGAVC---GPAELVNSMMDLHHGA--LMLLGPTMNPKVAFELSER 272 (418)
T ss_pred ------HH-H----cCCcEEEEeCccccCCCCCceEEEEE---cCHHHHHHHHHHhhhh--hhccCCCCCHHHHHHHHcC
Confidence 11 1 135789999999999899885 7753 4777666655432210 1122333334444443333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
... +....+++++++..+.+.|+ +.+
T Consensus 273 l~t--------l~~r~~~~~~~a~~la~~L~-~~~ 298 (418)
T PLN02242 273 LPH--------LSLRMKEHCRRAMEYAKRMK-ELG 298 (418)
T ss_pred CCc--------HHHHHHHHHHHHHHHHHHHH-hCC
Confidence 222 23455678889999999998 775
No 165
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=1.1e-22 Score=194.27 Aligned_cols=320 Identities=14% Similarity=0.064 Sum_probs=202.4
Q ss_pred eecCCCcccccHHHHHHHHHhhccCCCccCcC---------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGENKEYLP---------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
|+|..+..++++.+.+++.+.+... ..++. ..-..++|+.+++++.. ++++|++ ++|+|++
T Consensus 2 yld~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~i~~--t~~~t~a 71 (379)
T TIGR03402 2 YLDNNATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEEAREQVAKLLGA------EPDEIIF--TSGGTES 71 (379)
T ss_pred cCCCcCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCcHHHH
Confidence 4677777777899999988776421 11111 11245777788887643 2678999 9999999
Q ss_pred HHHHHHHHHH-hCCCCEEEEcCCCCcchhhh---hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 115 LRLAAALIER-YFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 115 ~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
+.++...+.. ..+||.|++...+|+.+... ++..|.+++.++. .+++.+|++++++.+++ ++.++++++++
T Consensus 72 ~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~--~~~g~~~~~~l~~~i~~---~~~lv~i~~~~ 146 (379)
T TIGR03402 72 DNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPV--DEEGRLDLEELRAAITD---DTALVSVMWAN 146 (379)
T ss_pred HHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEcc--CCCCcCCHHHHHHhcCC---CcEEEEEEccc
Confidence 9987543322 24678999999888776543 3456889888887 34567899999999875 67888889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||||.+++. ++|.++|+++|+++++|+++.. +..+.+ ....+.++++.|.+|.+|++| +|++++
T Consensus 147 n~tG~~~~~---~~I~~l~~~~g~~vivD~~~~~-g~~~~~---------~~~~~~D~~~~s~~K~~gp~G--~g~l~v- 210 (379)
T TIGR03402 147 NETGTIFPI---EEIGEIAKERGALFHTDAVQAV-GKIPID---------LKEMNIDMLSLSGHKLHGPKG--VGALYI- 210 (379)
T ss_pred CCeeecccH---HHHHHHHHHcCCEEEEECcccc-cccccC---------cccCCCCEEEEcHHHcCCCCc--eEEEEE-
Confidence 999998875 4677789999999999999653 321111 112235677788889888777 577754
Q ss_pred eCCchhHHHHHHHHH-hh-ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCC
Q 015283 271 CSSSDLAARVKSQLK-RL-ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGK 346 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~ 346 (410)
+++. .+..... .. ...... +++..+..++...++ +. .+.+++..++.+++++++.+.|+ + +..
T Consensus 211 --~~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~---~~---~~~~~~~~~~~~~l~~~l~~~l~-~~~~~-- 277 (379)
T TIGR03402 211 --RKGT--RFRPLLRGGHQERGRRAGTENVPGIVGLGKAAE---LA---TEHLEEENTRVRALRDRLEAGLL-ARIPD-- 277 (379)
T ss_pred --CCCC--CCCCcccCCccCCCcCCCCccHHHHHHHHHHHH---HH---HHhHHHHHHHHHHHHHHHHHHHH-hhCCC--
Confidence 3331 1111110 00 000111 222222222222221 11 22345666788888888888887 5 321
Q ss_pred CcccccCC----ccee-ee-cCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCc
Q 015283 347 DWSFILRQ----IGMF-SF-TGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSL 392 (410)
Q Consensus 347 ~~~~~~~~----~~~~-~~-~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~ 392 (410)
+.+..+. .+.. ++ .+.+.+.+...++++||.+.+| | |+|+.. .|+
T Consensus 278 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~ 356 (379)
T TIGR03402 278 -ARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTE 356 (379)
T ss_pred -EEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCH
Confidence 2222211 1222 23 3456665555666789998642 3 999775 388
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
+||+++++.|+++++.
T Consensus 357 ~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 357 EDIDYVLEVLPPIIAR 372 (379)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998765
No 166
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.91 E-value=8.4e-23 Score=194.76 Aligned_cols=318 Identities=15% Similarity=0.117 Sum_probs=200.4
Q ss_pred eecCCCcccccHHHHHHHHHhhccCCC--c----cCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGEN--K----EYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~--~----~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
++|..+.+++++.+.+++.+.+..... + .+. -.....++|+.+++++... +++++++ ++|+++++
T Consensus 2 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~a~ 74 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAP-----SPDEIIF--TRNTTEAI 74 (373)
T ss_pred cccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCCHHHHH
Confidence 356667777789999998776522110 0 110 1234567889999886432 1568888 99999999
Q ss_pred HHHHHHHHHhC---CCCEEEEcCCCCcch----hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283 116 RLAAALIERYF---PGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188 (410)
Q Consensus 116 ~~~~~~~~~~~---~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~ 188 (410)
.++... ... +||+|++++++|++. ....+..|++++.++. .+++.+|++++++.+.+ ++.++++++
T Consensus 75 ~~~~~~--l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~---~~~~v~~~~ 147 (373)
T cd06453 75 NLVAYG--LGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPV--DDDGQLDLEALEKLLTE---RTKLVAVTH 147 (373)
T ss_pred HHHHHH--hhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeec--CCCCCcCHHHHHHHhcC---CceEEEEeC
Confidence 987433 344 899999999999874 3344577999999987 35567999999999875 677778899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
|+||||.+.+. ++|+++|+++|++|++|++|...... . .+ .....++++.|++|.++. .++|+++
T Consensus 148 ~~~~tG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~-~-----~~----~~~~~d~~~~s~~K~~~~--~g~g~~~ 212 (373)
T cd06453 148 VSNVLGTINPV---KEIGEIAHEAGVPVLVDGAQSAGHMP-V-----DV----QDLGCDFLAFSGHKMLGP--TGIGVLY 212 (373)
T ss_pred cccccCCcCCH---HHHHHHHHHcCCEEEEEhhhhcCcee-e-----ec----cccCCCEEEeccccccCC--CCcEEEE
Confidence 99999997764 57777799999999999997633211 0 11 111345677899999985 5579875
Q ss_pred EEeCCchhHHHHHHHHHhh----------------ccCcc-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 269 VVCSSSDLAARVKSQLKRL----------------ARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~----------------~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
+ +++.++.+....... ..... .+++..+..++...++. +. ...+++.+++.++++
T Consensus 213 ~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~--l~---~~g~~~~~~~~~~~~ 284 (373)
T cd06453 213 G---KEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDY--LE---KIGMEAIAAHEHELT 284 (373)
T ss_pred E---chHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHH--HH---HcCHHHHHHHHHHHH
Confidence 5 667555543321100 00001 12332222222222221 00 112356677777888
Q ss_pred HHHHHHhhhccCCCCCccccc---CCcceeee--cCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC-
Q 015283 332 QKLFDSLSAKDKSGKDWSFIL---RQIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG- 389 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~---~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~- 389 (410)
+++.+.|+ +++. +++.. ...+++.+ .+.+.+.+.+.++++||.+.++ + |+|+..
T Consensus 285 ~~l~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~ 360 (373)
T cd06453 285 AYALERLS-EIPG---VRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLY 360 (373)
T ss_pred HHHHHHHh-cCCC---eEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCC
Confidence 88999888 7742 23321 12333322 2234444444445579988642 2 999874
Q ss_pred CCcccHHHHHHHH
Q 015283 390 LSLAKCEYLADAI 402 (410)
Q Consensus 390 ~~~~~i~~~~~~l 402 (410)
.|.++++++++.|
T Consensus 361 ~t~~di~~~~~~l 373 (373)
T cd06453 361 NTEEEIDALVEAL 373 (373)
T ss_pred CCHHHHHHHHhhC
Confidence 3889999998864
No 167
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.91 E-value=3.9e-22 Score=192.45 Aligned_cols=343 Identities=9% Similarity=0.014 Sum_probs=207.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|..-...|+. +|.+.+++.+++.... +.+.+..+.+. ..++++.+....+... .+.+.+ +.+|++
T Consensus 41 ~~~lD~~~g~~~~~lGh~--~~~i~~a~~~~~~~~~-~~~~~~~~~~~-~~~la~~l~~~~~~~~-~~~~~f--~~sGse 113 (425)
T PRK08088 41 REYLDFAGGIAVLNTGHL--HPKVVAAVEAQLKKLS-HTCFQVLAYEP-YLELCEKMNQKVPGDF-AKKTLL--VTTGSE 113 (425)
T ss_pred CEEEEcCCchhhcCCCCC--CHHHHHHHHHHHhhCC-CccccccCCHH-HHHHHHHHHHhCCCCC-CCEEEE--eCCcHH
Confidence 467899887652334544 6888888888875532 12222222332 2355555444322221 246777 889999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcc--------------c--eeeecCCCccc--ChhhHHHHHh
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS--------------E--YRYYDPKTVGL--DFEGMIADIK 175 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~--------------~--v~~~~~~~~~~--d~~~l~~~i~ 175 (410)
|++.+.++...+.+..+|+..+++|.+....+...+.... . +|.. ..+... +++.+++.+.
T Consensus 114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~l~ 192 (425)
T PRK08088 114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCP-LHGVSEDDAIASIERIFK 192 (425)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcc-ccCccHHHHHHHHHHHHH
Confidence 9999988877766567788889999877644443222111 0 1110 010101 1456777775
Q ss_pred c--CCCCc-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 176 A--APGGS-FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 176 ~--~~~~~-~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
. .++.. .+++-+..++++...++.+.+++|.++|++||+++|+||+|.+++.. ...+.+. ....+..+.|
T Consensus 193 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~---g~~~~~~----~~~~~pdi~s 265 (425)
T PRK08088 193 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRT---GTLFAME----QMGVAADLTT 265 (425)
T ss_pred hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---cchhHHh----hcCCCCCEEE
Confidence 2 12233 44444445777777889999999999999999999999999987643 2222221 1123344789
Q ss_pred ccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283 253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 332 (410)
Q Consensus 253 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (410)
|||.++ +|+|+||++. ++++.+.+. ......+...+.+.+.++...|+.... .+++++.++..+..++
T Consensus 266 ~sK~l~-~G~rig~v~~---~~~~~~~~~----~~~~~~t~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~ 333 (425)
T PRK08088 266 FAKSIA-GGFPLAGVTG---RAEVMDAIA----PGGLGGTYAGNPIACAAALAVLKVFEQ----ENLLQKANALGEKLKD 333 (425)
T ss_pred Eecccc-CCCcceeeEe---cHHHHhhcC----CCCCCCCCCcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHH
Confidence 999998 8999999855 777555443 223333445667777877777764322 2334444444444444
Q ss_pred HHHHHhhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCCC------eEEecC-CCc
Q 015283 333 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG------RISLAG-LSL 392 (410)
Q Consensus 333 ~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~g------Ris~~~-~~~ 392 (410)
.+.+... ..+. +.... ..|+++|+.+ ...+..++++ .||.+.|++ ||+++. .++
T Consensus 334 ~l~~l~~-~~~~---~~~v~-g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~iRl~~~~~~t~ 407 (425)
T PRK08088 334 GLLAIAE-KHPE---IGDVR-GLGAMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPYYNVLRILVPLTIED 407 (425)
T ss_pred HHHHHHH-hCCC---eEEEe-ccceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCCCCEEEEECCCCcCH
Confidence 4444333 3331 11122 2277888754 1223445554 698887753 999874 589
Q ss_pred ccHHHHHHHHHHHhhhc
Q 015283 393 AKCEYLADAIIDSYHNV 409 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++|++++.++
T Consensus 408 ~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 408 AQIRQGLEIIAQCFDEA 424 (425)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998765
No 168
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.91 E-value=3.4e-22 Score=190.37 Aligned_cols=330 Identities=12% Similarity=0.111 Sum_probs=196.1
Q ss_pred eeeeeeeeecCCCcccccHHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 37 LNLGVGAYRTEELQPYVLDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
+||+..+||....+ |.++++..++++. .....|+...++.+|++++++++.. ++.+++ ++
T Consensus 1 ~~f~s~dyLgl~~~----~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~al~~---~s 66 (392)
T PLN03227 1 LNFATHDFLSTSSS----PTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ESAILY---SD 66 (392)
T ss_pred CCCcCcCccCCCCC----HHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEe---cC
Confidence 46777777655554 5566555555422 1123476667889999999999744 355666 45
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC--------CCCcE
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--------PGGSF 182 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--------~~~~~ 182 (410)
|+.+...+ +...+.+||.|+++++.|.++...+...+.+++.++..+. -+++.+.+.+... .++++
T Consensus 67 G~~a~~~~--i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~ 140 (392)
T PLN03227 67 GASTTSST--VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRR 140 (392)
T ss_pred cHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcE
Confidence 54444454 3445789999999999999998877766777666665211 1334444444321 13577
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh--hcCCcEEEEeccccccccc
Q 015283 183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~~~~ 260 (410)
++++.+++||+|.+.+ ++++.++|++||+++|+||+|. ++..+.... +....+. +..+.++++.|+||.+|
T Consensus 141 ~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~-g~~~~~g~~p~~~~Div~~slsk~~g-- 213 (392)
T PLN03227 141 FLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLENAFG-- 213 (392)
T ss_pred EEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCCC-cHHHHcCCCCCCCceEEEeechhhhh--
Confidence 8888999999999887 6677888999999999999986 442211111 1111111 12235888999999876
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+..|++. .++++++.+... ....+++ +.+...+.++...+... . ..++.+++++++.+++.+.|+
T Consensus 214 -~~gg~v~---~~~~~~~~~~~~---~~~~~~~~~~~p~~~~aa~~al~~~------~-~~~~~~~~l~~~~~~l~~~L~ 279 (392)
T PLN03227 214 -SVGGMTV---GSEEVVDHQRLS---GSGYCFSASAPPFLAKADATATAGE------L-AGPQLLNRLHDSIANLYSTLT 279 (392)
T ss_pred -ccCcEEe---cCHHHHHHHHHh---CcCccccCCCCHHHHHHHHHHHHHH------h-cCHHHHHHHHHHHHHHHHHHH
Confidence 4447753 366755443321 1111223 22333333332222211 0 013566778888888888887
Q ss_pred hccCCCC------CcccccCCcceeeecCC-C-------------HHHHHHhhhcCcEEEcCC-------------C--e
Q 015283 340 AKDKSGK------DWSFILRQIGMFSFTGL-N-------------KAQSDNMTNKWHVYMTKD-------------G--R 384 (410)
Q Consensus 340 ~~~g~~~------~~~~~~~~~~~~~~~~~-~-------------~~~~~~ll~~~gi~v~~~-------------g--R 384 (410)
+.+.+. .........++++.+.+ + .++.+++++ +|+.+.+. . |
T Consensus 280 -~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~~P~~~iR 357 (392)
T PLN03227 280 -NSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLS-EGVAVVSTGGHVKKFLQLVPPPCLR 357 (392)
T ss_pred -hcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHH-CCCEEEecccccCCcCCCCCCceEE
Confidence 544210 00000111222322222 1 133455555 59887531 1 8
Q ss_pred EEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 385 ISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 385 is~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+++.. +|++|++++++.|++++.++
T Consensus 358 ~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 358 VVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 88664 59999999999999998653
No 169
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=3.5e-22 Score=190.44 Aligned_cols=319 Identities=11% Similarity=0.058 Sum_probs=197.0
Q ss_pred cHHHHHHHHHhhccC--CCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--CCC
Q 015283 54 LDVVKKAENLMLERG--ENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG 128 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~--~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~~g 128 (410)
.|.+.+++.+.+... ....|+. ..-..++++.+++++. . ++.++++ ++||++++..+...+... .+|
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~--~~~~~~~--~~ggt~a~~~a~~~~~~~~~~~~ 104 (371)
T PRK13520 33 HPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLH----L--PDAYGYI--TSGGTEANIQAVRAARNLAKAEK 104 (371)
T ss_pred hHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhC----C--CCCCeEE--ecCcHHHHHHHHHHHHhhccCCC
Confidence 688888887776432 1111211 0111456666666643 2 1446777 899999998875544333 257
Q ss_pred CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 015283 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV 208 (410)
Q Consensus 129 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~ 208 (410)
|+|++++++|..+...++..|.+++.++. ++++.+|++.+++.+.+ ++..++.+.++|+||.+.+ +++|.++
T Consensus 105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~---l~~I~~l 176 (371)
T PRK13520 105 PNIVVPESAHFSFDKAADMLGVELRRAPL--DDDYRVDVKAVEDLIDD---NTIGIVGIAGTTELGQVDP---IPELSKI 176 (371)
T ss_pred ceEEecCcchHHHHHHHHHcCceEEEecC--CCCCcCCHHHHHHHHhh---CCEEEEEEcCCcCCcccCC---HHHHHHH
Confidence 99999999999998888889999988887 34567899999999975 4555555678899999765 6677777
Q ss_pred HHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283 209 IQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 288 (410)
Q Consensus 209 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~ 288 (410)
|+++|+++++|++|..+..+ .......+. ........+..|.+| ++.+|.++|+++ ..+++.++.+... ....
T Consensus 177 ~~~~g~~livD~a~~~~~~~-~~~~~~~~~--~~~~~vd~~~~s~~K-~~~a~~~~G~~~--~~~~~~~~~l~~~-~~~~ 249 (371)
T PRK13520 177 ALENGIFLHVDAAFGGFVIP-FLDDPPNFD--FSLPGVDSITIDPHK-MGLAPIPAGGIL--FRDESYLDALAVD-TPYL 249 (371)
T ss_pred HHHcCCCEEEEecchhHHHH-hhcCCCCcc--ccCCCCceEEECCcc-ccCccCCceEEE--EcCHHHHHhhccc-Cccc
Confidence 99999999999998765421 001100000 011123445567778 455678899874 4455544443210 0010
Q ss_pred cC-----cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc-cccCCcceeeecC
Q 015283 289 RP-----MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-FILRQIGMFSFTG 362 (410)
Q Consensus 289 ~~-----~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~~~ 362 (410)
.. ...+.+.....++...|+.- ..+.+++.+++..++++++.+.|+ ++|+ + +..+..+ ++.+.
T Consensus 250 ~~~~~~~~~gt~~~~~~~~~~~al~~l-----~~~g~~~~~~~~~~~~~~l~~~L~-~~g~----~~~~~~~~~-~v~~~ 318 (371)
T PRK13520 250 TSKKQATLTGTRSGAGVAATYAVMKYL-----GREGYRKVVERCMENTRWLAEELK-ERGF----EPVIEPVLN-IVAFD 318 (371)
T ss_pred cCCCCcceEeeccChHHHHHHHHHhhh-----cHhHHHHHHHHHHHHHHHHHHHHH-hCCC----EEecCCCce-EEEEe
Confidence 00 00011112222222223211 022346777888889999999998 7763 4 3444444 33333
Q ss_pred C-CHH-HHHHhhhcCcEEEcCCC-----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283 363 L-NKA-QSDNMTNKWHVYMTKDG-----RISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 363 ~-~~~-~~~~ll~~~gi~v~~~g-----Ris~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
+ +.+ +..+|.+ +||.+.+++ |+|+.. .|+++++++++.|+++++
T Consensus 319 ~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 319 DPNPDEVREKLRE-RGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred cCCHHHHHHHHHH-CCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 3 334 4455554 599987753 998653 389999999999998875
No 170
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=1.6e-21 Score=187.59 Aligned_cols=329 Identities=15% Similarity=0.104 Sum_probs=202.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCC-----ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GEN-----KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~-----~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
.++++|+.+.|+.... +|++.+++.++++. +.. ..+....-..++++.+++++.. +..++
T Consensus 45 ~~~~~~~sn~ylgl~~----~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~-- 110 (406)
T PRK13393 45 REVTVWCSNDYLGMGQ----HPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--------EAALL-- 110 (406)
T ss_pred ccEEEeecccccCCCC----CHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--------CcEEE--
Confidence 4689999998864444 46777777766643 110 1111122356788888888532 23444
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-CCCcEEEEe
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLH 186 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~~ii~ 186 (410)
.++|++++..+...+....+||.|++....|+.....+...|.++..++. .|++.+++.++.. +++++++++
T Consensus 111 ~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~ 183 (406)
T PRK13393 111 FTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAF 183 (406)
T ss_pred eCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEE
Confidence 46677788887554433337887777778888777777777777666654 3677777777543 235677888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G 265 (410)
++++|++|.+.+ +++|.++|+++|+++|+||+|....+++.. ..+ . ...+. ...+++++||||.+|++| |
T Consensus 184 ~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g~-~-~~~~~~~~~~i~~~tlsKa~g~~G---G 254 (406)
T PRK13393 184 ESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GGI-A-EREGLADRLTIIEGTLAKAFGVMG---G 254 (406)
T ss_pred cCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCC-Cch-h-hhcCCCCCCeEEEEeCchhhcccC---c
Confidence 999999999776 667777799999999999997633322111 111 1 11111 123678899999999877 8
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|++ .++++++.+......+. .+...+..++.++...|+.. .+. ...+.+++++++++.+.|+ +.+
T Consensus 255 ~~~---~~~~~~~~l~~~~~~~~--~t~~~~p~~~aa~~aaL~~~------~~~-~~~~~~~~~~~~~l~~~L~-~~g-- 319 (406)
T PRK13393 255 YIT---GSAALCDFIRSFASGFI--FTTSLPPAVAAGALASVRHL------KAS-SAERERHQDRVARLRARLD-KAG-- 319 (406)
T ss_pred eee---CCHHHHHHHHHhCcCce--ecCccCHHHHHHHHHHHHHH------hhC-HHHHHHHHHHHHHHHHHHH-HcC--
Confidence 863 37775555443211111 12223333333333333211 011 1234567788889999998 776
Q ss_pred CCcccccCCcceeee-cCCC---HHHHHHhhhcCcEEEcC--------C-C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 346 KDWSFILRQIGMFSF-TGLN---KAQSDNMTNKWHVYMTK--------D-G--RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 346 ~~~~~~~~~~~~~~~-~~~~---~~~~~~ll~~~gi~v~~--------~-g--Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+...++.+.++.+ ++.. .++..++++++||.+.+ + + ||++.. .+++|++++++.|++++.++
T Consensus 320 --~~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 320 --IPHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred --CCcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 3444455444322 2221 23455666656999864 2 2 888763 48999999999999987653
No 171
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.90 E-value=1.2e-21 Score=181.75 Aligned_cols=324 Identities=15% Similarity=0.135 Sum_probs=215.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
.+++||++++||....+|.+-+.+.+++.+.-.. +...-++...-+.+|.+.+|+|+ +. +.-+++ ++|
T Consensus 39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~------e~al~f---~SG 108 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GA------EAALLF---SSG 108 (388)
T ss_pred ceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------CcEEEE---ccc
Confidence 5789999999986666643333344444432111 11122444455678999999995 32 345666 666
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC---CCcEEEEeCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGC 188 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~---~~~~~ii~~~ 188 (410)
-.|+..+ +...+.+||-|+..+-.+.+..+.++..+++.+.+.+ .|++.|++++.+.+ .+.++|++..
T Consensus 109 y~AN~~~--i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivteg 179 (388)
T COG0156 109 FVANLGL--LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEG 179 (388)
T ss_pred chhHHHH--HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEec
Confidence 6666665 3444668999999999999999999999999999887 48899999987631 1356677666
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH-HHh-hcCCcEEEEecccccccccCCCcce
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LFA-TRGMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~-~~~-~~~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
.-.-.|. .++|.+|++++++|+.++++||+|+-..+++... ++. .+. .....+|.++||||++|..| ||
T Consensus 180 VfSMdGd---iApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~Gr---G~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~ 250 (388)
T COG0156 180 VFSMDGD---IAPLPELVELAEKYGALLYVDEAHAVGVLGPNGR---GLAEHFGLEPEEVDIIVGTLGKALGSSG---GY 250 (388)
T ss_pred cccCCCC---cCCHHHHHHHHHHhCcEEEEEccccccccCCCCc---cHHHHhCCCCccceEEEEEchhhhcccC---ce
Confidence 6666666 6778888888999999999999977666542211 222 221 22345899999999999776 78
Q ss_pred EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH--HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI--VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
++++..+++.++...+.+++++. -||..+..+ +...+.+. ...+++++++.+.+...++ ..+
T Consensus 251 ---v~g~~~~~d~L~~~ar~~ifSta-lpP~~aaa~~~al~~l~~~----------~~~r~~L~~~~~~~~~~~~-~~~- 314 (388)
T COG0156 251 ---IAGSAALIDYLRNRARPFIFSTA-LPPAVAAAALAALRILEEG----------PERRERLQELAAFFRSLLK-ALG- 314 (388)
T ss_pred ---eeCcHHHHHHHHHhCCceeccCC-CCHHHHHHHHHHHHHHHhC----------HHHHHHHHHHHHHHHHHHH-hcC-
Confidence 45588877777776665555433 233322111 23333322 4677888888888886666 655
Q ss_pred CCCcccccCCccee-eecCC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHH
Q 015283 345 GKDWSFILRQIGMF-SFTGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 345 ~~~~~~~~~~~~~~-~~~~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~ 405 (410)
+...+..+.+. +.++. ..+....++++ ||++.+- | |+++.. .|+++|+.+++.|.++
T Consensus 315 ---~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 315 ---LVLLPSESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ---CccCCCCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 23333333333 33454 23456788776 9998653 3 888764 5999999999998875
No 172
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=1.5e-21 Score=184.15 Aligned_cols=315 Identities=17% Similarity=0.117 Sum_probs=197.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++||-. |.. ..-|.+++++.+++++.++.+. |. +.+++++++.+++.+.+| .+++++ ++|+|.
T Consensus 8 ~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~--~~g~t~ 71 (363)
T TIGR01437 8 KKVINAS-GKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVI--VSSASA 71 (363)
T ss_pred ceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEE--EcCHHH
Confidence 3566654 433 4556666789999999887532 32 244666666666655554 346777 999999
Q ss_pred HHHHHHHHHHHhCCCC---------------EEEEcCCCCcch----hhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283 114 SLRLAAALIERYFPGA---------------KVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 174 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd---------------~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 174 (410)
++.++ +...+.+|| +|+++.|.|..| ...+...|++++.++. .+.+|++++++.+
T Consensus 72 al~~a--l~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai 145 (363)
T TIGR01437 72 GIAQS--VAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAI 145 (363)
T ss_pred HHHHH--HHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhc
Confidence 99998 444477887 999999888766 4566778999988865 2458999999999
Q ss_pred hcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283 175 KAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 253 (410)
Q Consensus 175 ~~~~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 253 (410)
.+ ++++++ +++|+||+|.+.+. ++|+++|++||+++++|++|.. . +...... +.++++.|+
T Consensus 146 ~~---~t~ai~~v~~~~~~~g~~~~~---~~i~~~a~~~gi~vivD~a~~~-~----------~~~~~~~-g~D~~~~S~ 207 (363)
T TIGR01437 146 TE---KTAAILYIKSHHCVQKSMLSV---EDAAQVAQEHNLPLIVDAAAEE-D----------LQKYYRL-GADLVIYSG 207 (363)
T ss_pred Ch---hceEEEEEecCCCCcCCcCCH---HHHHHHHHHcCCeEEEECCCCC-c----------hHHHHHc-CCCEEEEeC
Confidence 75 455444 67889999997765 5678889999999999999751 1 1111112 356788999
Q ss_pred cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283 254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 332 (410)
Q Consensus 254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (410)
+|.+ +|++.|+++. +++.++.+........+.... .....++.++...+.+. ..+..+...++++
T Consensus 208 ~K~l--~gp~~G~l~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~---------~~~~~~~~~~~~~ 273 (363)
T TIGR01437 208 AKAI--EGPTSGLVLG---KKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLST---------GKESGAEMVAKLT 273 (363)
T ss_pred Cccc--CCCceEEEEE---cHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHcc---------CcccHHHHHHHHH
Confidence 9976 5788899744 666555543211111111101 11122333333332221 1122233334566
Q ss_pred HHHHHhhhccCCCCCccccc--CCcce------eeec----CCCHHHHHHhhhcCc--EEEcC----CC--eEEecCCCc
Q 015283 333 KLFDSLSAKDKSGKDWSFIL--RQIGM------FSFT----GLNKAQSDNMTNKWH--VYMTK----DG--RISLAGLSL 392 (410)
Q Consensus 333 ~l~~~l~~~~g~~~~~~~~~--~~~~~------~~~~----~~~~~~~~~ll~~~g--i~v~~----~g--Ris~~~~~~ 392 (410)
.+.+.|. +++. +.... +..+. ..+- +.+...+.+.|++.| |.+++ .| |+++..+++
T Consensus 274 ~l~~~L~-~i~g---~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~ 349 (363)
T TIGR01437 274 PFIEALN-TLKG---VSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTG 349 (363)
T ss_pred HHHHHHh-cCCC---eEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCH
Confidence 7888887 6631 33321 11111 1121 446656555555445 88774 34 777777789
Q ss_pred ccHHHHHHHHHHHh
Q 015283 393 AKCEYLADAIIDSY 406 (410)
Q Consensus 393 ~~i~~~~~~l~~~l 406 (410)
+|++.++++|++++
T Consensus 350 ~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 350 GQLDIIVERIREIV 363 (363)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998864
No 173
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=1.9e-21 Score=188.00 Aligned_cols=323 Identities=17% Similarity=0.203 Sum_probs=193.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC-----ccCc-CCcccHHH----HHHHHHHhcCCCCCcccCCce
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-----KEYL-PIEGLAAF----NKVTAELLFGADNSVLKEQRV 103 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~~y~-~~~g~~~l----r~aia~~~~~~~~~~~~~~~i 103 (410)
...++|..+.. + +++.+++++...+..... ..|. ...-...+ |+.+++++... ..+|
T Consensus 25 ~~~~~l~~~~n------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~------~~~i 91 (416)
T PRK00011 25 EEHIELIASEN------F-VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAE------YANV 91 (416)
T ss_pred hcCeeeecccC------c-CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC------ceee
Confidence 46789997764 3 479999988665421110 1111 11112223 23455554322 3445
Q ss_pred EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-----hhhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283 104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
++ .+|+.++..++ ...+.+||+|+++.|+|..+... +...|++++.++.. .+++.+|++++++.+++
T Consensus 92 ~~---~sgt~al~~~l--~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~-- 163 (416)
T PRK00011 92 QP---HSGSQANAAVY--FALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVD-EETGLIDYDEVEKLALE-- 163 (416)
T ss_pred ec---CCchHHHHHHH--HHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcC-cccCCcCHHHHHHHHHh--
Confidence 44 45788888763 33467999999999999865322 23345677777763 24578999999999875
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC-CCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
.+++++++++++|| . ..++++|.++|+++|+++|+|++|.. +...+. .... .. ..+++++|+||.+
T Consensus 164 ~~~k~v~~~~~~~~--~---~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~--~~~~----~~--~~di~~~S~~K~l 230 (416)
T PRK00011 164 HKPKLIIAGASAYS--R---PIDFKRFREIADEVGAYLMVDMAHIAGLVAAGV--HPSP----VP--HADVVTTTTHKTL 230 (416)
T ss_pred cCCCEEEECCCcCC--C---ccCHHHHHHHHHHcCCEEEEECcchhcccccCc--cCCC----CC--CCcEEEecCCcCC
Confidence 24555665555544 3 34578888899999999999999742 221100 0001 11 2457799999976
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
+|.|.||+ ++.++++.+++.... ... ..++......++...+. .. ..+.+++.+++++++++++.+
T Consensus 231 --~g~~gg~i--~~~~~~~~~~l~~~~----~~~~~~~~~~~~~aa~~~a~~--~~---~~~~~~~~~~~~~~~~~~l~~ 297 (416)
T PRK00011 231 --RGPRGGLI--LTNDEELAKKINSAV----FPGIQGGPLMHVIAAKAVAFK--EA---LEPEFKEYAQQVVKNAKALAE 297 (416)
T ss_pred --CCCCceEE--EeCCHHHHHHHHHHh----CccccCCccHHHHHHHHHHHH--HH---HhhhHHHHHHHHHHHHHHHHH
Confidence 68899997 444567666554422 211 11222212122111111 11 122346778889999999999
Q ss_pred HhhhccCCCCCccccc-CCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------------C-eEEe-----cCCC
Q 015283 337 SLSAKDKSGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISL-----AGLS 391 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------------g-Ris~-----~~~~ 391 (410)
.|+ +.|+ ++.. ...++++|+.+ +.+.+.+.++++||.+..+ + |++. .+++
T Consensus 298 ~L~-~~g~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t 372 (416)
T PRK00011 298 ALA-ERGF----RVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFK 372 (416)
T ss_pred HHH-hCCC----eeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcC
Confidence 998 8773 3332 12236666644 3445555666679998621 2 7742 1357
Q ss_pred cccHHHHHHHHHHHhhh
Q 015283 392 LAKCEYLADAIIDSYHN 408 (410)
Q Consensus 392 ~~~i~~~~~~l~~~l~~ 408 (410)
+++++++++.|++++..
T Consensus 373 ~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 373 EAEMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 89999999999998654
No 174
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=2.9e-22 Score=189.05 Aligned_cols=299 Identities=13% Similarity=0.032 Sum_probs=201.1
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--C-----
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--F----- 126 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~----- 126 (410)
+..+.+.+....+... ..|....+..++++++++++.+..|.+.+++++++ |+|||+++.++...+..- .
T Consensus 12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~ 88 (345)
T cd06450 12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVF--TSGGSESNLLALLAARDRARKRLKAG 88 (345)
T ss_pred HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEE--eCChhHHHHHHHHHHHHHhhhhhhcc
Confidence 4555566666655443 55887888999999999998777776534567888 999999999885544321 1
Q ss_pred ---C--CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCC
Q 015283 127 ---P--GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPT 198 (410)
Q Consensus 127 ---~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~ 198 (410)
+ ++.|++++++|..+...++..|.+++.+++. +++.+|++.+++.+.+ ...++.++++++|+||||.+
T Consensus 89 ~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~-- 164 (345)
T cd06450 89 GGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVD--EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI-- 164 (345)
T ss_pred cccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeC--CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC--
Confidence 2 3478888999999988888889999999883 3457999999999864 12256677778999999995
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHH
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 278 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~ 278 (410)
.++++|+++|+++|+++++|++|..+... .+... . ......+.+.+..|++|.++ ++.+.|++++ +
T Consensus 165 -~~~~~i~~~~~~~~~~l~vD~a~~~~~~~-~~~~~-~--~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~---~----- 230 (345)
T cd06450 165 -DPLEEIADLAEKYDLWLHVDAAYGGFLLP-FPEPR-H--LDFGIERVDSISVDPHKYGL-VPLGCSAVLV---R----- 230 (345)
T ss_pred -CCHHHHHHHHHHhCCeEEEechhhHHHhh-ChhhH-H--HhcCccccCEEEEchhHhhC-CCcchHHHHH---H-----
Confidence 56788888899999999999998876642 11111 0 01111224566779999775 5577888622 1
Q ss_pred HHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc-cCCcce
Q 015283 279 RVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI-LRQIGM 357 (410)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~ 357 (410)
...+.++...+.. +.+++.+++..++++++.+.|+ +++. +.+. .+..++
T Consensus 231 ------------------~~~~~~~l~~l~~--------~g~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~~~~~i 280 (345)
T cd06450 231 ------------------ALKLWATLRRFGR--------DGYGEHIDRIVDLAKYLAELIR-ADPG---FELLGEPNLSL 280 (345)
T ss_pred ------------------HHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHh-cCCC---eEEecCCceeE
Confidence 2223333333332 2345777888889999999888 7642 3332 345555
Q ss_pred eeec--C-----CC-HHHHHHhhhcCcEEEcCC------C--eEEecC-C-CcccHHHHHHHHHH
Q 015283 358 FSFT--G-----LN-KAQSDNMTNKWHVYMTKD------G--RISLAG-L-SLAKCEYLADAIID 404 (410)
Q Consensus 358 ~~~~--~-----~~-~~~~~~ll~~~gi~v~~~------g--Ris~~~-~-~~~~i~~~~~~l~~ 404 (410)
+.|. + .. .++.+++. ++|+.+.++ + |+++.. . ++++++++++.|++
T Consensus 281 v~f~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 281 VCFRLKPSVKLDELNYDLSDRLN-ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEEECCcchhhHHHHHHHHHHH-hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 5443 2 12 23345554 455443321 2 999875 3 88999999999876
No 175
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.89 E-value=4e-22 Score=191.52 Aligned_cols=323 Identities=15% Similarity=0.097 Sum_probs=203.1
Q ss_pred eeecCCCcccccHHHHHHHHHhhccCCCcc----C----cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 43 AYRTEELQPYVLDVVKKAENLMLERGENKE----Y----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 43 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~----y----~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
.|+|..+..++++.+.+++.+.+....... + ......+++|+.+++++.. ++++|++ ++|+|++
T Consensus 5 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~v~~--~~g~t~a 76 (402)
T TIGR02006 5 IYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGA------DSREIVF--TSGATES 76 (402)
T ss_pred EEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCCHHHH
Confidence 466777777778999999877653211010 1 1123466778888888643 2678999 9999999
Q ss_pred HHHHHHHHHH--hCCCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283 115 LRLAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189 (410)
Q Consensus 115 ~~~~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p 189 (410)
+.+++..+.. ..+||.|+++.+.|+.+...+ +..|.+++.++. .+++.+|++.+++.+++ ++.+++++++
T Consensus 77 ~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~l~~---~~~lv~v~~~ 151 (402)
T TIGR02006 77 NNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPP--KSNGLIDLEELKAAIRD---DTILVSIMHV 151 (402)
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEcc--CCCCcCCHHHHHHhcCC---CCEEEEEECC
Confidence 9987544432 258999999999998766544 456888888887 34567899999998865 5778888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
+||||.+.+ +++|.++|+++|+++++|++++ ++..+.+ ......++++.|.+|.+|++| +|++++
T Consensus 152 ~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a-~g~~~~~---------~~~~~~D~~~~s~~K~~gp~G--~G~l~~ 216 (402)
T TIGR02006 152 NNEIGVIQD---IAAIGEICRERKVFFHVDAAQS-VGKIPIN---------VNELKVDLMSISGHKIYGPKG--IGALYV 216 (402)
T ss_pred CcCceeccc---HHHHHHHHHHcCCEEEEEcchh-cCCcccC---------ccccCCCEEEEehhhhcCCCc--eEEEEE
Confidence 999999665 6678888999999999999964 3321111 112235678889999888667 578754
Q ss_pred EeCCchhHHHHHHHHHh--hccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283 270 VCSSSDLAARVKSQLKR--LARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 346 (410)
+++...++...... ..+.... +++.....++...++. ..+.++...++.++.++++.+.|+ ++..
T Consensus 217 ---~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~------~~~~~~~~~~~~~~l~~~l~~~l~-~~~~-- 284 (402)
T TIGR02006 217 ---RRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI------AKEEMAQDTAHVLALRDRLLNGIK-SIEE-- 284 (402)
T ss_pred ---ccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHh-cCCC--
Confidence 33222111111100 0011122 2333222222233321 122356677888999999999987 6541
Q ss_pred Cccccc------CCcceeeecCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCc
Q 015283 347 DWSFIL------RQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSL 392 (410)
Q Consensus 347 ~~~~~~------~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~ 392 (410)
+.+.. |....+.|.+...+.+...++ ++.+..| + |+|+.. .|+
T Consensus 285 -v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l~--~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~ 361 (402)
T TIGR02006 285 -VYLNGDLEHRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTE 361 (402)
T ss_pred -EEEeCCccccCCCeEEEEEeCcCHHHHHHhcC--CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCH
Confidence 22211 111134444444444333332 4544221 2 999875 388
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
+|++++++.|+++++.
T Consensus 362 edid~l~~~l~~~~~~ 377 (402)
T TIGR02006 362 EEIDYAVKLVKSAIDK 377 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 176
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.89 E-value=1.1e-21 Score=187.43 Aligned_cols=321 Identities=17% Similarity=0.115 Sum_probs=196.4
Q ss_pred ecCCCcc-cccHHHHHHHHHhhccCC----CccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 45 RTEELQP-YVLDVVKKAENLMLERGE----NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 45 ~~~~~~~-~~~~~v~~a~~~~~~~~~----~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
+|..+.+ +.|+.+.+++.+.+.... ...|.. ..+..++|+.+++++... ..++|++ ++|+++++
T Consensus 3 ld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~al 75 (376)
T TIGR01977 3 FDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAP-----SSAHVVF--TNNATTAL 75 (376)
T ss_pred ccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE--eCCHHHHH
Confidence 3444444 346888888877664321 112322 256778999999997432 1357888 99999999
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 116 RLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 116 ~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
..+ +...+.+||+|+++.++|+.+.. .++.+|.+++.++.. +++.+|++++++.+++ +++++++++|+|
T Consensus 76 ~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~---~~~~v~~~~~~n 148 (376)
T TIGR01977 76 NIA--LKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIKT---NTKLIVVSHASN 148 (376)
T ss_pred HHH--HHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcCC---CCeEEEEECCCC
Confidence 987 34446799999999999987643 344568898888873 4567899999998864 677788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+++. ++|.++|+++|+++|+|++++.... +.+. .....++++.|.+|.++.|. ..|.+++
T Consensus 149 ~tG~~~~~---~~i~~l~~~~~~~livD~a~~~g~~-~~~~---------~~~~~D~~~~s~~K~l~~p~-g~g~l~~-- 212 (376)
T TIGR01977 149 VTGTILPI---EEIGELAQENGIFFILDAAQTAGVI-PIDM---------TELAIDMLAFTGHKGLLGPQ-GTGGLYI-- 212 (376)
T ss_pred CccccCCH---HHHHHHHHHcCCEEEEEhhhccCcc-CCCc---------hhcCCCEEEecccccccCCC-CceEEEE--
Confidence 99998875 5677779999999999999643221 1111 12245688889999875332 2466643
Q ss_pred CCchhHHHHHHH---HHh--------h-ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 272 SSSDLAARVKSQ---LKR--------L-ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 272 ~~~~~~~~~~~~---~~~--------~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+++..++.+... ... . .+...++++.....++...++ +. .+...+.++++.+++.+.+.+.|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~---~~--~~~g~~~~~~~~~~l~~~~~~~l~ 287 (376)
T TIGR01977 213 REGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIK---FI--EKIGIANIAKKECMLTEKLLNGLR 287 (376)
T ss_pred cCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHH---HH--HHhCHHHHHHHHHHHHHHHHHHHh
Confidence 233211111100 000 0 000111222222222222221 10 012245677888888888888887
Q ss_pred hccCCCCCcccccC-----Cccee--eecCCCHHHHH-HhhhcCcEEEcCC----------------C--eEEecC-CCc
Q 015283 340 AKDKSGKDWSFILR-----QIGMF--SFTGLNKAQSD-NMTNKWHVYMTKD----------------G--RISLAG-LSL 392 (410)
Q Consensus 340 ~~~g~~~~~~~~~~-----~~~~~--~~~~~~~~~~~-~ll~~~gi~v~~~----------------g--Ris~~~-~~~ 392 (410)
+.+. +....+ ..+.. ...+.+.+.+. .|.+++||.+.+| + |+++.. .|+
T Consensus 288 -~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~ 363 (376)
T TIGR01977 288 -EINK---VKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTE 363 (376)
T ss_pred -cCCC---eEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCH
Confidence 6542 232221 12222 11234555554 4444448887542 2 998664 489
Q ss_pred ccHHHHHHHHHH
Q 015283 393 AKCEYLADAIID 404 (410)
Q Consensus 393 ~~i~~~~~~l~~ 404 (410)
++++.++++|++
T Consensus 364 ~dv~~~~~~l~~ 375 (376)
T TIGR01977 364 EEIEKLLEALSE 375 (376)
T ss_pred HHHHHHHHHHhh
Confidence 999999999976
No 177
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.89 E-value=9.7e-21 Score=180.76 Aligned_cols=217 Identities=16% Similarity=0.078 Sum_probs=149.3
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~ 150 (410)
+..+..+|++++++++.. ++.++ +++|++|+..+ +...+.+||+|+++.|.|+.+... ++..|.
T Consensus 62 ~~p~~~~Le~~iA~~~g~--------~~~l~--~~sG~~Ai~~a--l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 129 (400)
T PRK06234 62 GNPTSTEVENKLALLEGG--------EAAVV--AASGMGAISSS--LWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV 129 (400)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence 677899999999999642 23455 69999998877 445578999999999999876544 456788
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc--CCcccccccCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASG 228 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~ 228 (410)
+++.++. .|++++++.+++ +++++++++|+||||.+.+ +++|+++|+++ |+++|+|++|......
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~~---~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 130 EVTFVDT-------SNLEEVRNALKA---NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EEEEECC-------CCHHHHHHHhcc---CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 8888765 278899988875 6778888999999999776 66777778986 9999999998765532
Q ss_pred CCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh
Q 015283 229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV 307 (410)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l 307 (410)
. .+ ..+.++++.|+||.++.+|+++ ||++. +++++++++...... ......+......+...|
T Consensus 197 ~------~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~---~~~~~~~l~~~~~~~--~~g~~l~p~~a~l~~~~l 260 (400)
T PRK06234 197 R------PL-----QLGADVVVHSATKYLNGHGDVIAGFVVG---KEEFINQVKLFGIKD--MTGSVIGPFEAFLIIRGM 260 (400)
T ss_pred C------ch-----hhCCcEEEeeccccccCCCCceeEEEEe---cHHHHHHHHHHHHHH--hcCCCCCHHHHHHHHhcc
Confidence 1 11 1135689999999999889876 88643 667666654321111 111233343333344444
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
+.. ....++..++...+.+.|+ +.+
T Consensus 261 ~tl----------~~r~~~~~~na~~~a~~L~-~~~ 285 (400)
T PRK06234 261 KTL----------QIRMEKHCKNAMKVAKFLE-SHP 285 (400)
T ss_pred CcH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 432 2333344456666666666 543
No 178
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.89 E-value=7.2e-21 Score=183.01 Aligned_cols=327 Identities=11% Similarity=0.075 Sum_probs=202.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|..-...|+. .|.+.+++.+.++.. +...+.......++.+.++++. . .+++++ +++|+
T Consensus 41 ~~~lD~~~~~~~~~~Gh~--~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~SGs 108 (401)
T PRK00854 41 NRYLDCLSAYSAVNQGHC--HPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT-G-------SHKVLP--MNSGA 108 (401)
T ss_pred CEEEEcCcchhhccCCCC--CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC-C-------CCEEEE--eCCcH
Confidence 467888777432233443 588888888877542 2111223345566777777763 1 246888 89999
Q ss_pred hHHHHHHHHHHHhC-------CC-CEEEEcCCCCcchhhhhhhCCC-------------CccceeeecCCCcccChhhHH
Q 015283 113 GSLRLAAALIERYF-------PG-AKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 113 ~a~~~~~~~~~~~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~l~ 171 (410)
+|++.+.+++..+. +| ++|++..-+|.+....+...+. ++..++. .|++.++
T Consensus 109 ~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le 181 (401)
T PRK00854 109 EAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALE 181 (401)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHH
Confidence 99999987775541 24 6888887766554322221111 1222222 3789999
Q ss_pred HHHhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 172 ADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
+.+.+ +++++++++|+||||.+++.. .+++|.++|++||+++|+||+|.+++..+ ..+.... .+...+.+ +
T Consensus 182 ~~i~~---~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g---~~~~~~~-~g~~~D~~-~ 253 (401)
T PRK00854 182 AAITP---NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTG---KLLAEEH-EGIEADVT-L 253 (401)
T ss_pred HHhCC---CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---hHhHHhh-cCCCCCEE-E
Confidence 88864 678888899999999999755 59999999999999999999998776432 1111111 11122333 2
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
+||.++...+|+||++. ++++++.+ .......+.+.+.+.+.++...|+.. .+ ....+.++++
T Consensus 254 --~~K~l~gg~~~ig~v~~---~~~~~~~l----~~~~~~~t~~~~~~~~aa~~a~L~~l------~~--~~~~~~~~~~ 316 (401)
T PRK00854 254 --IGKALSGGFYPVSAVLS---NSEVLGVL----KPGQHGSTFGGNPLACAVARAALKVL------TE--EGMIENAAEM 316 (401)
T ss_pred --ecccccCCccCeEEEEE---cHHHHhcc----cCCCCCCCCCcCHHHHHHHHHHHHHH------HH--cCHHHHHHHH
Confidence 47999744479999754 77755443 22222222234555666655554321 10 2345777888
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeec--CC--C-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL--N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLAD 400 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~--~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~ 400 (410)
.+++.+.|+ +++... +....+.+.++.+. +- + .++.+.+++ .||.+.+.+ ||++. ..++++++++++
T Consensus 317 ~~~l~~~L~-~~~~~~-~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~-~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~ 393 (401)
T PRK00854 317 GAYFLEGLR-SIRSNI-VREVRGRGLMLAVELEPEAGGARQYCEALKE-RGLLAKDTHDHTIRLAPPLVITREQVDWALE 393 (401)
T ss_pred HHHHHHHHH-hhccCc-eEEEeccceEEEEEEecCchhHHHHHHHHHH-CCeEEecCCCCEEEEeCCcccCHHHHHHHHH
Confidence 888888888 765210 11223444444432 21 2 334566665 599997653 88864 349999999999
Q ss_pred HHHHHhh
Q 015283 401 AIIDSYH 407 (410)
Q Consensus 401 ~l~~~l~ 407 (410)
+|++++.
T Consensus 394 ~l~~~l~ 400 (401)
T PRK00854 394 QIAKVLA 400 (401)
T ss_pred HHHHHhh
Confidence 9999874
No 179
>PLN00144 acetylornithine transaminase
Probab=99.89 E-value=7.3e-21 Score=180.63 Aligned_cols=333 Identities=13% Similarity=0.033 Sum_probs=198.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|..-...|+. +|.+.+++.+++... +...+.......++.+.+++. .+ .+.+.+ +++|+
T Consensus 15 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~----~~----~~~v~f--~~sGs 82 (382)
T PLN00144 15 KEYLDMAAGIAVNALGHG--DPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVAS----SF----ADRVFF--CNSGT 82 (382)
T ss_pred CEEEECCcCHHhccCCCC--CHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhc----CC----CCeEEE--eCCcH
Confidence 467888877532344554 588888888887542 111111122223444444443 11 358888 99999
Q ss_pred hHHHHHHHHHHHhCC-------------CCEEEEcCCCCcchhhhhh-hCCCCc---cceeeecCCC--cccChhhHHHH
Q 015283 113 GSLRLAAALIERYFP-------------GAKVLISSPTWGNHKNIFN-DARVPW---SEYRYYDPKT--VGLDFEGMIAD 173 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~-------------gd~Vl~~~p~y~~~~~~~~-~~g~~~---~~v~~~~~~~--~~~d~~~l~~~ 173 (410)
+|++.+.++.+.+.. ..+|+....+|.+...... ..+... ...+..+.-. .-.|++.+++.
T Consensus 83 eA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 162 (382)
T PLN00144 83 EANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKL 162 (382)
T ss_pred HHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHh
Confidence 999999888776531 2478888888866543222 111110 0011100000 01268888888
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCCCCHHH--HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 174 IKAAPGGSFILLHGCAHNPTGIDPTPEQ--WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~--l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
+.. ....++++...+||.| +++... +++|.++|++||+++|+||+|.+|+..+ ..+... .....++ +.
T Consensus 163 ~~~--~~~aavi~eP~q~~gg-~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g---~~~~~~-~~~~~PD---i~ 232 (382)
T PLN00144 163 IQK--GKTAAVFVEPVQGEGG-IYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG---YLWAHE-AYGVEPD---IM 232 (382)
T ss_pred cCC--CCeEEEEEccccCCCC-CccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hHhhhh-hcCCCCC---EE
Confidence 753 3455555455599944 444444 9999999999999999999999887432 222221 1222234 66
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH---HHhCChhhHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
+|||.++ +|+|+||+++ ++++.+.+.. .....+...+.+++.++. .+++++++ .+++++..+.+
T Consensus 233 t~sK~l~-~G~pig~v~~---~~~~~~~~~~----~~~~~T~~~~pl~~aaa~a~l~~i~~~~~----~~~~~~~g~~l- 299 (382)
T PLN00144 233 TLAKPLA-GGLPIGAVLV---TEKVASAINP----GDHGSTFAGGPLVCNAALAVLDKISKPGF----LASVAKKGEYL- 299 (382)
T ss_pred Eeccccc-CCcceEEEEE---cHHHHhccCC----CCCCCCCCCCHHHHHHHHHHHHHHhhchH----HHHHHHHHHHH-
Confidence 8999998 7999999855 7775554422 122222344555555555 55555443 33344444444
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC-----eEEecC-CCcccHHHHH
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG-----RISLAG-LSLAKCEYLA 399 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g-----Ris~~~-~~~~~i~~~~ 399 (410)
++.+.+.+. +.+. +. .....|++.|+.++ ..+...+++ .||.+.|++ ||+++. .+++++++++
T Consensus 300 --~~~l~~~~~-~~~~---~~-~vrg~G~~~~l~l~~~~~~~~~~~~~-~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~ 371 (382)
T PLN00144 300 --RELLRRKLG-GNPH---VK-EVRGVGLLVGIQLDVPAGPLVDACRD-SGLLVLTAGKGDVVRLVPPLVISEAELEQAV 371 (382)
T ss_pred --HHHHHHHHh-hCCC---ce-eeecCceEEEEEecCccHHHHHHHHH-CCeEEeecCCCCEEEEeCCCccCHHHHHHHH
Confidence 333444444 3331 11 12237888888652 345556655 699998864 898876 6899999999
Q ss_pred HHHHHHhhhc
Q 015283 400 DAIIDSYHNV 409 (410)
Q Consensus 400 ~~l~~~l~~~ 409 (410)
++|.+++.+.
T Consensus 372 ~~l~~~l~~~ 381 (382)
T PLN00144 372 EILADCLPAL 381 (382)
T ss_pred HHHHHHHHhc
Confidence 9999998753
No 180
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=1.1e-20 Score=178.56 Aligned_cols=277 Identities=14% Similarity=0.154 Sum_probs=186.2
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcch----hhhhh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFN 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~----~~~~~ 146 (410)
.+| +.....+|++.++++.... ..+ + ++||++++.++ +..+.+||+|++++|+|+.. ...+.
T Consensus 47 ~r~-~~pt~~~le~~la~l~g~~-------~~~-~--~~sG~~ai~~~---~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~ 112 (366)
T PRK08247 47 SRT-GNPTRGVLEQAIADLEGGD-------QGF-A--CSSGMAAIQLV---MSLFRSGDELIVSSDLYGGTYRLFEEHWK 112 (366)
T ss_pred cCC-CCchHHHHHHHHHHHhCCC-------cEE-E--EcCHHHHHHHH---HHHhCCCCEEEEecCCcCcHHHHHHHHhh
Confidence 444 4556789999999996432 223 3 68899998875 34567999999999999874 33455
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.+++.++. .|++.+++.+.+ +++++++++|+||+|. ..++++|+++|+++|+++|+|++|....
T Consensus 113 ~~G~~v~~vd~-------~d~~~l~~~i~~---~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~ 179 (366)
T PRK08247 113 KWNVRFVYVNT-------ASLKAIEQAITP---NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPV 179 (366)
T ss_pred ccCceEEEECC-------CCHHHHHHhccc---CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccc
Confidence 68888877765 378899988875 6788888999999876 8899999999999999999999985433
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
.. . ++ ....+++++|+||.++.+ +++.||+ +++++++.+++..... ......+...+.++..
T Consensus 180 ~~----~--p~-----~~g~di~i~S~sK~~~g~~d~~~G~i--v~~~~~l~~~~~~~~~----~~g~~~s~~~a~l~~~ 242 (366)
T PRK08247 180 LQ----R--PL-----EEGADIVIHSATKYLGGHNDVLAGLV--VAKGQELCERLAYYQN----AAGAVLSPFDSWLLIR 242 (366)
T ss_pred cc----C--ch-----hcCCcEEEeecceeccCCCceeeeEE--ecChHHHHHHHHHHHH----hcCCCCChHHHHHHHh
Confidence 21 0 11 123579999999999643 4578886 4444665555543222 1122334444555555
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc-c-ccCCcceeeecCC-CHHHHHHhhh---------
Q 015283 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-F-ILRQIGMFSFTGL-NKAQSDNMTN--------- 373 (410)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~ll~--------- 373 (410)
.|+.- ....++.+++++.+.+.|+ +.+. +. + .++.+++|.|. + ..+...++++
T Consensus 243 ~l~tl----------~~r~~~~~~~a~~l~~~L~-~~p~---v~~v~~P~~gg~~sf~-~~~~~~~~~~~~~l~~~~~~~ 307 (366)
T PRK08247 243 GMKTL----------ALRMRQHEENAKAIAAFLN-EQPG---VTDVLYPGRGGMLSFR-LQDEEWVNPFLKSLKLITFAE 307 (366)
T ss_pred ccCcH----------HHHHHHHHHHHHHHHHHHH-hCCC---eeEEecCCcCcEEEEE-ECCHHHHHHHHHcCCcceEcc
Confidence 44422 2344456888899999998 7642 22 2 44478998883 3 2222322222
Q ss_pred ----cCcEEEcCC---------------C------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 374 ----KWHVYMTKD---------------G------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 374 ----~~gi~v~~~---------------g------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..++.+.|+ | |||++- |+++.+++.|.++++.+
T Consensus 308 slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 308 SLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQV 365 (366)
T ss_pred CCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhhc
Confidence 123444443 1 888854 88999999999998764
No 181
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.89 E-value=2.9e-21 Score=184.23 Aligned_cols=318 Identities=10% Similarity=0.055 Sum_probs=190.6
Q ss_pred cHHHHHHHHHhhcc--CCCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh----C
Q 015283 54 LDVVKKAENLMLER--GENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY----F 126 (410)
Q Consensus 54 ~~~v~~a~~~~~~~--~~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~----~ 126 (410)
.+.+.+++...... +....|+. ..-..++++.+++++... ++++++ ++|+++++..+...+..+ .
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~------~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~ 104 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLP------DAYGYI--VSGGTEANIQAVRAAKNLAREEK 104 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCC------CCCeEE--eccHHHHHHHHHHHHHHHHhccC
Confidence 45556666555422 11122321 111246666677665322 456666 789999887764433321 3
Q ss_pred CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
+||.|++++++|..+...++..|++++.++. .+++.+|++++++.+.+ ++..++..+|+||||.+. ++++|.
T Consensus 105 ~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~--~~~~~~d~~~l~~~l~~---~~~~vv~~~~~~~tG~~~---~~~~i~ 176 (373)
T TIGR03812 105 RTPNIIVPESAHFSFEKAAEMLGLELRYAPL--DEDYTVDVKDVEDLIDD---NTIGIVGIAGTTELGQID---DIEELS 176 (373)
T ss_pred CCcEEEECCcchHHHHHHHHHcCCeEEEEee--CCCCCcCHHHHHHHHhh---CcEEEEEECCCCCCCccC---CHHHHH
Confidence 6799999999999999999999999999987 34677899999999875 343333334789999965 466777
Q ss_pred HHHHHcCCcccccccCCCCCCCCCC---CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLD---NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ 283 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 283 (410)
++|+++|+++++|++|..+... .. .....+. .....-..+..|.+| +++++.|.|++ +..+++.++.+...
T Consensus 177 ~l~~~~~~~livD~a~~~~~~~-~~~~~~~~~~~d--~~~~~~d~~~~s~~K-~~~~~~~~G~~--~~~~~~~~~~l~~~ 250 (373)
T TIGR03812 177 KIALENGIYLHVDAAFGGFVIP-FLKKGYNPPPFD--FSLPGVQSITIDPHK-MGLSPIPAGGI--LFRSKSYLKYLSVD 250 (373)
T ss_pred HHHHHcCCeEEEEcCchhHHHH-HHhcCCCCCCcc--ccCCCCCEEEECccc-cCCCcCCceEE--EEeCHHHHhhhccc
Confidence 7799999999999998754311 00 0000000 001112344567789 66677888876 33466655544210
Q ss_pred HHhhccCc----c-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee
Q 015283 284 LKRLARPM----Y-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF 358 (410)
Q Consensus 284 ~~~~~~~~----~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~ 358 (410)
..+.... . .+++.....++...|+.-. ++.+++..+++.++++++.+.|+ ++|. ..+..+... +
T Consensus 251 -~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~-----~~g~~~~~~~~~~~~~~l~~~L~-~~g~---~~~~~~~~~-~ 319 (373)
T TIGR03812 251 -APYLTVKKQATITGTRSGASAAATYAVIKYLG-----REGYRKIVAECMENTRYLVEELK-KIGF---EPVIEPVLN-I 319 (373)
T ss_pred -CcccCCCCCcceEeechhHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHH-hCCC---eEEcCCCce-E
Confidence 1110000 0 1112222222223332110 23456778899999999999999 8763 123333333 3
Q ss_pred eecCC-C-HHHHHHhhhcCcEEEcCCC-----eEEecC-CCcccHHHHHHHHHHH
Q 015283 359 SFTGL-N-KAQSDNMTNKWHVYMTKDG-----RISLAG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 359 ~~~~~-~-~~~~~~ll~~~gi~v~~~g-----Ris~~~-~~~~~i~~~~~~l~~~ 405 (410)
+.+.. + .++.++|.+ +||.+.++. |+++.. .++++++.+++.|+++
T Consensus 320 v~~~~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 320 VAFEVDDPEEVRKKLRD-RGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred EEEEeCCHHHHHHHHHH-CCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 33333 2 334555554 699997652 998764 3889999999999763
No 182
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.88 E-value=1.4e-20 Score=178.72 Aligned_cols=324 Identities=11% Similarity=0.028 Sum_probs=192.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-----CCCccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceE
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-----GENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVA 104 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----~~~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~ 104 (410)
..+++|++++||+...+|++.+.+.+++.+.... .+..... ...-+.++++.+++++... +.++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-------~~l~ 76 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-------EAFI 76 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-------eEEE
Confidence 4689999999999999988788888888776311 0001111 2334678999999986442 3355
Q ss_pred EEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCC
Q 015283 105 TVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGG 180 (410)
Q Consensus 105 ~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~ 180 (410)
+ ++ |+.++..+ ...+ .+||.|++..-.|......+.......+.++. .|++++++.++.. ++.
T Consensus 77 ~--~s-G~~a~~~~---~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~ 143 (370)
T PRK05937 77 V--PS-GYMANLGL---CAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFG 143 (370)
T ss_pred E--CC-hHHHHHHH---HHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCC
Confidence 5 44 44444332 3333 47788877777887776666654333333322 4789998888642 134
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 260 (410)
+.++++++++|+||.+.| +++|.++|+++|+++++|++|.....+ .+.. .+.......+..+.+.|+||.+|+.
T Consensus 144 ~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g-~~g~--g~~~~~~~~~~~~~~~tlsK~~g~~ 217 (370)
T PRK05937 144 RIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFG-DDGK--GFCHSLGYENFYAVLVTYSKALGSM 217 (370)
T ss_pred cEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccC-CCCC--chHHhhCCCCCcEEEEechhhhhcC
Confidence 566777899999999777 556777799999999999998643322 2111 1111111112236688999999977
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
|.+ .+ . .++..+.+........... +.+..+..++ ...+.+. .+..+++++++++++.+.
T Consensus 218 G~~--vl-~---~~~~~~~~~~~~~~~~~s~--~~~~~~~~a~~aal~~l~~~---------~~~~~~~l~~l~~~l~~~ 280 (370)
T PRK05937 218 GAA--LL-S---SSEVKQDLMLNSPPLRYST--GLPPHLLISIQVAYDFLSQE---------GELARKQLFRLKEYFAQK 280 (370)
T ss_pred ceE--EE-c---CHHHHHHHHHhCCCCeecC--CCCHHHHHHHHHHHHHHHhC---------cHHHHHHHHHHHHHHHHh
Confidence 732 22 2 4554444432222222111 2222222222 2222211 134566778888888877
Q ss_pred hhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcC----C-C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 338 LSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTK----D-G--RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~----~-g--Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+. ..+. ... ..+.+.+...+.+.+.++++||.+.. . + |+|+.. .|++|++++++.|+++++++
T Consensus 281 l~-~~~~----~~~----~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 281 FS-SAAP----GCV----QPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred cC-CCCC----CCE----EEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 76 4321 000 11222233444455555667998863 1 2 999864 38999999999999988654
No 183
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.88 E-value=1.8e-20 Score=180.32 Aligned_cols=337 Identities=10% Similarity=0.022 Sum_probs=194.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|..-...|+. +|.+.+++.+.+... +...........++++.++++. + .+.+++ +++|+
T Consensus 31 ~~~lD~~~~~~~~~~Gh~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~----~~~~~~--~~SGs 98 (400)
T PTZ00125 31 KKYYDFLSAYSAVNQGHC--HPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF----G----YDKVLP--MNSGA 98 (400)
T ss_pred CEEEEcccCHhhccCCcC--CHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC----C----CCEEEE--eCCcH
Confidence 467898877542233443 688999888876431 1111111223345555555542 2 257788 89999
Q ss_pred hHHHHHHHHHHHh--------CCCCEEEEcCCCCcchhh-hhhhCCCC-cc--ceeeecC--CCcccChhhHHHHHhcCC
Q 015283 113 GSLRLAAALIERY--------FPGAKVLISSPTWGNHKN-IFNDARVP-WS--EYRYYDP--KTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 113 ~a~~~~~~~~~~~--------~~gd~Vl~~~p~y~~~~~-~~~~~g~~-~~--~v~~~~~--~~~~~d~~~l~~~i~~~~ 178 (410)
+|++.+.++.... ..+++|+..+-+|.+... .+...+.. .. ..+..+. .-.-.|++.+++.+..
T Consensus 99 ~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-- 176 (400)
T PTZ00125 99 EAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD-- 176 (400)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC--
Confidence 9999987766432 134788888877765532 22222211 00 0000000 0001378999988862
Q ss_pred CCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
+++.++++.+++||||.+++.+ .+++|.++|++||+++|+||+|.+++..+ ..+... .....++++ ++||.+
T Consensus 177 ~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G---~~~~~~-~~~~~pd~~---~~sK~l 249 (400)
T PTZ00125 177 PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG---KLLAHD-HEGVKPDIV---LLGKAL 249 (400)
T ss_pred CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhHHH-hcCCCCCEE---EEcccc
Confidence 3677777788899999998755 49999999999999999999998876431 122111 111122333 478999
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
+.+++|+||+++ ++++++.+.. .....+.+.+...+.++...|+.- .+ +...++.+++.+++.+.
T Consensus 250 ~~g~~~ig~v~~---~~~~~~~~~~----~~~~~t~~~~~~~~~aa~~~l~~i------~~--~~~~~~~~~~~~~l~~~ 314 (400)
T PTZ00125 250 SGGLYPISAVLA---NDDVMLVIKP----GEHGSTYGGNPLACAVAVEALEVL------KE--EKLAENAQRLGEVFRDG 314 (400)
T ss_pred cCCCcCcEEEEE---cHHHHhhccC----CCCCCCCCcCHHHHHHHHHHHHHH------Hh--cCHHHHHHHHHHHHHHH
Confidence 855569999855 7775555432 222222234445555554333210 00 11233444455555555
Q ss_pred hhhcc-CCCCCcccccCCcceeeecCC------C-HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHH
Q 015283 338 LSAKD-KSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIID 404 (410)
Q Consensus 338 l~~~~-g~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~ 404 (410)
|+ ++ +....+....+ .|.+.++.+ . .++..++++ +||.+.|++ ||+.. ..+++++++++++|.+
T Consensus 315 l~-~l~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~ 391 (400)
T PTZ00125 315 LK-ELLKKSPWVKEIRG-KGLLNAIVFDHSDGVNAWDLCLKLKE-NGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKK 391 (400)
T ss_pred HH-HHHhcCCCeEEEec-ccEEEEEEEccCcchHHHHHHHHHHH-CCeEEeecCCCEEEEECCccCCHHHHHHHHHHHHH
Confidence 55 43 11011122333 345544422 1 234566665 699999865 89854 2489999999999999
Q ss_pred Hhhhc
Q 015283 405 SYHNV 409 (410)
Q Consensus 405 ~l~~~ 409 (410)
++.++
T Consensus 392 ~l~~~ 396 (400)
T PTZ00125 392 VLKSF 396 (400)
T ss_pred HHHHH
Confidence 88764
No 184
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.88 E-value=9.6e-21 Score=181.25 Aligned_cols=327 Identities=15% Similarity=0.105 Sum_probs=199.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-+..|+. +|.+.+++.+++.... ...| +..-..++.+.++++. + .+.+.+ +++|
T Consensus 35 ~~ylD~~~g~~~~~lGh~--~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~L~~~~----~----~~~~~f--~~SG 101 (397)
T TIGR03246 35 KEYIDFAGGIAVNALGHA--HPELVKALIEQADKLWHIGNGY-TNEPVLRLAKKLVDAT----F----ADKVFF--CNSG 101 (397)
T ss_pred CEEEECCcCHhhccCCCC--CHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCCc
Confidence 568999887433455664 6899999888775421 1122 2223446666666652 1 357888 8999
Q ss_pred hhHHHHHHHHHHHhC------CCCEEEEcCCCCcchhh-hhhhCCCC------------ccceeeecCCCcccChhhHHH
Q 015283 112 TGSLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 112 t~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~~ 172 (410)
++|++.+.++.+.+. ..++|+..+-+|.+... .+...+.. +..++. .|++.+++
T Consensus 102 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 174 (397)
T TIGR03246 102 AEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKA 174 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHH
Confidence 999999988876652 23678887777665532 22322211 111221 37889988
Q ss_pred HHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 173 DIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 173 ~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
.+.+ ++.++++.+++++.|... +.+.+++|.++|++||+++|+||+|.+++.. ...+....+ +..++++
T Consensus 175 ~l~~---~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~---G~~~a~~~~-gv~pDi~--- 244 (397)
T TIGR03246 175 LISD---KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRT---GELYAYMHY-GVTPDIL--- 244 (397)
T ss_pred Hhcc---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcc---ccchhhhhc-CCCCCEE---
Confidence 8864 566777665566666554 7888999999999999999999999888633 222222111 1122333
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
++||.++ +|+++||+++ ++++.+.+ .......+.+.+.+++.++...|+..+ .++..++++++.
T Consensus 245 t~~K~lg-gG~pigav~~---~~~i~~~~----~~~~~~~t~~~~p~~~aaa~a~l~~~~--------~~~l~~~~~~~~ 308 (397)
T TIGR03246 245 TSAKALG-GGFPIGAMLT---TTEIAAHL----KVGTHGTTYGGNPLACAVAGKVLDLVN--------TPELLAGVKQRH 308 (397)
T ss_pred Eeehhhh-CCcceeEEEE---cHHHHHhc----cCCCcCCCCCCCHHHHHHHHHHHHHHh--------hccHHHHHHHHH
Confidence 7899998 7999999755 77754443 222222222334444455444433110 124567777888
Q ss_pred HHHHHHhhhccCCCCCc-ccccCCcceeeecCC-------CHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHH
Q 015283 332 QKLFDSLSAKDKSGKDW-SFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYL 398 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~ 398 (410)
+++.+.|+ +++....+ ......+.++ .+.+ ...+..++++ +|+.+.+.| |++.+. .++++++++
T Consensus 309 ~~l~~~L~-~l~~~~~~~~~vrg~G~~~-~i~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~ 385 (397)
T TIGR03246 309 DLFVDGLE-KINARYNVFSEIRGKGLLI-GAVLTEAYQGKAKQFVNAAAE-EGVIALIAGPNVVRFAPSLVISDDDIDEG 385 (397)
T ss_pred HHHHHHHH-HHHhcCCCeEeeecCceEE-EEEEcCchhhHHHHHHHHHHH-CCeEEeecCCCEEEEeCCCCCCHHHHHHH
Confidence 88888887 66421111 1222333322 2211 2234556665 699987654 785332 499999999
Q ss_pred HHHHHHHhhhc
Q 015283 399 ADAIIDSYHNV 409 (410)
Q Consensus 399 ~~~l~~~l~~~ 409 (410)
+++|.+++.++
T Consensus 386 ~~~l~~~l~~~ 396 (397)
T TIGR03246 386 LARFERAIEQV 396 (397)
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 185
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=3.1e-20 Score=177.04 Aligned_cols=219 Identities=12% Similarity=0.108 Sum_probs=145.3
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----h
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~ 146 (410)
.+| +.....++++.++++.... ...+ +++|+.++..+ +...+.+||+|+++.|.|+.+...+ .
T Consensus 60 ~r~-~~p~~~~Le~~lA~l~G~~--------~~~~--~~sG~~Ai~~~--l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~ 126 (398)
T PRK07504 60 SRY-SNPTVDMFEKRMCALEGAE--------DARA--TASGMAAVTAA--ILCQVKAGDHVVAARALFGSCRYVVETLLP 126 (398)
T ss_pred ecC-CCchHHHHHHHHHHHhCCC--------eeeE--ecCHHHHHHHH--HHHHhCCCCEEEEcCCchhHHHHHHHHHHh
Confidence 334 4556789999999995332 2223 57888888765 4445789999999999999765544 3
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.+++.++. +|++++++.+.+ +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|....
T Consensus 127 ~~G~~v~~vd~-------~d~e~l~~ai~~---~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~ 193 (398)
T PRK07504 127 RYGIESTLVDG-------LDLDNWEKAVRP---NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPL 193 (398)
T ss_pred hcCeEEEEECC-------CCHHHHHHhcCc---CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccc
Confidence 56776666642 688999998864 7888888999999999776 6677777999999999999987554
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHH-HHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
.. . .+ ..+.++++.|+||.++.+|+++|++ ++.+++.+. ++...+. ......+...+.++..
T Consensus 194 ~~----~--~~-----~~gaDivv~S~sK~l~g~g~~~GG~--vv~~~~~i~~~~~~~~~----~~g~~~s~~~A~~~l~ 256 (398)
T PRK07504 194 FQ----K--PL-----ELGAHIVVYSATKHIDGQGRCLGGV--VLSDKAWIEEHLQDYFR----HTGPSLSPFNAWTLLK 256 (398)
T ss_pred cC----C--ch-----hhCCCEEEeeccccccCCccceEEE--EEeCcHHHHHHHHHHHH----HhCCCCCHHHHHHHHh
Confidence 32 1 11 1135688999999999899999765 333555443 2332222 1122334433333444
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.|+.- ....++..++...+.+.|+ +.+
T Consensus 257 ~L~tl----------~~R~~~~~~na~~la~~L~-~~p 283 (398)
T PRK07504 257 GLETL----------PVRVRQQTESAAAIADFLA-GHP 283 (398)
T ss_pred ccchH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 44332 2333444466666677776 543
No 186
>PRK14012 cysteine desulfurase; Provisional
Probab=99.88 E-value=6e-21 Score=183.57 Aligned_cols=324 Identities=15% Similarity=0.113 Sum_probs=197.1
Q ss_pred eeecCCCcccccHHHHHHHHHhhc--cCCC--cc------CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 43 AYRTEELQPYVLDVVKKAENLMLE--RGEN--KE------YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 43 ~~~~~~~~~~~~~~v~~a~~~~~~--~~~~--~~------y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
.|+|..+..++++.+.+++.++.. .... .. +.......++|+.+++++... ++++++ ++|||
T Consensus 5 iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~------~~~v~~--~~g~t 76 (404)
T PRK14012 5 IYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD------PREIVF--TSGAT 76 (404)
T ss_pred EEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC------cCeEEE--eCCHH
Confidence 567777877778999999877663 1110 10 111124567788888886432 577988 99999
Q ss_pred hHHHHHHHHHHH--hCCCCEEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283 113 GSLRLAAALIER--YFPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 187 (410)
Q Consensus 113 ~a~~~~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~ 187 (410)
+++.++...+.. +.+||.|++++++|+.+...+. ..|++++.++. ++++.+|++.+++.+++ ++++++++
T Consensus 77 ~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~--~~~g~~d~~~l~~~i~~---~t~lv~~~ 151 (404)
T PRK14012 77 ESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDP--QSNGIIDLEKLEAAMRD---DTILVSIM 151 (404)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEcc--CCCCcCCHHHHHHhcCC---CCEEEEEE
Confidence 999987544422 3589999999999987755443 46888888887 34567899999999975 67788889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 267 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l 267 (410)
+++||||.+. ++++|.++|+++|+++++|+++. ++..+.+ + ...+.++++.|++|.+|++ ++|++
T Consensus 152 ~~~n~tG~~~---~~~~I~~la~~~g~~vivD~a~~-~g~~~~~-----~----~~~~~D~~~~s~~K~~gp~--g~G~l 216 (404)
T PRK14012 152 HVNNEIGVIQ---DIAAIGEICRERGIIFHVDAAQS-VGKVPID-----L----SKLKVDLMSFSAHKIYGPK--GIGAL 216 (404)
T ss_pred CcCCCccchh---hHHHHHHHHHHcCCEEEEEcchh-cCCcccC-----c----ccCCCCEEEEehhhccCCC--ceEEE
Confidence 9999999955 56788888999999999999965 3321111 1 1223567778999988743 47888
Q ss_pred EEEeCCchhHHHHHHHHHhh--ccCcccCCChhHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 268 NVVCSSSDLAARVKSQLKRL--ARPMYSNPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
++ +++. ..++....... .+....+.+.....+ ....+.. . +....+..++.++.++++.+.|+ ++..
T Consensus 217 ~~--~~~~-~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~---~~~~~~~~~~~~~l~~~l~~~L~-~~~~ 286 (404)
T PRK14012 217 YV--RRKP-RVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARI---A---KEEMATENERIRALRDRLWNGIK-DIEE 286 (404)
T ss_pred EE--ecCC-CCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHH---H---HhhHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 54 2222 11221110000 000111111221111 1111111 0 11234566777888888888887 6531
Q ss_pred CCCccccc----C-CcceeeecC-CCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-C
Q 015283 345 GKDWSFIL----R-QIGMFSFTG-LNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-L 390 (410)
Q Consensus 345 ~~~~~~~~----~-~~~~~~~~~-~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~ 390 (410)
+.+.. . ...++++.. .+.+.+...++ ++.+..+ + |+++.. .
T Consensus 287 ---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~ 361 (404)
T PRK14012 287 ---VYLNGDLEQRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT 361 (404)
T ss_pred ---EEEeCCccccCCCEEEEEEeCcCHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCC
Confidence 22211 1 112233333 23333333333 3332211 2 898775 5
Q ss_pred CcccHHHHHHHHHHHhhhc
Q 015283 391 SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~~ 409 (410)
|++|++++++.|+++++.+
T Consensus 362 t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 362 TEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 8999999999999987653
No 187
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=4.2e-20 Score=177.96 Aligned_cols=338 Identities=10% Similarity=0.025 Sum_probs=196.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|.--...|+. +|.+.+++.+++.......+ .+.....++.+.+++..... ..+.+.+ +++|
T Consensus 33 ~~ylD~~~g~~~~~lGh~--~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f--~~sG 103 (420)
T TIGR00700 33 NRLIDFASGIAVLNIGHS--HPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS-----GPKKSVF--FNSG 103 (420)
T ss_pred CEEEECccCHHhccCCCC--CHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC-----CCCEEEE--eCCc
Confidence 467888887542344554 58899988888754221222 12222345566666553211 1257888 8999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CC--------C-----CccceeeecC---------CCcccChh
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDP---------KTVGLDFE 168 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g--------~-----~~~~v~~~~~---------~~~~~d~~ 168 (410)
++|++.+.++.+.+....+|+....+|.+....... .+ . .+..++..+. ..+.-+++
T Consensus 104 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (420)
T TIGR00700 104 AEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELA 183 (420)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHH
Confidence 999999998888776657888888888665432221 11 0 1111222100 00001245
Q ss_pred hHHHHHh--cCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 169 GMIADIK--AAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 169 ~l~~~i~--~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
.+++.+. ..++...++++...+.-+|..++..+ +++|.++|++||+++|+||+|.+|+..+ ..+..... +..+
T Consensus 184 ~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~~a~~~~-~~~p 259 (420)
T TIGR00700 184 AARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AMFACEHE-GPEP 259 (420)
T ss_pred HHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hhHHHhhc-CCCC
Confidence 5666653 22346677776667778888776665 9999999999999999999999987532 23332221 1222
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH---hCChhhHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEM 322 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~~~~ 322 (410)
+ +.++||.++ +|+|+||+++ ++++.+.+.. .....+.+.+.+++.++... +.++.+ .+..++
T Consensus 260 D---i~~lsK~l~-~G~pig~v~~---~~~i~~~~~~----~~~~~T~~~~pl~~aaa~a~l~~l~~~~~----~~~~~~ 324 (420)
T TIGR00700 260 D---LITTAKSLA-DGLPLSGVTG---RAEIMDAPAP----GGLGGTYAGNPLACAAALAVLAIIESEGL----IERARQ 324 (420)
T ss_pred C---EEEeecccc-CCcceEEEEe---cHHHHhhcCC----CCcCCCCCcCHHHHHHHHHHHHHHHhccH----HHHHHH
Confidence 3 346999999 8999999855 7775444321 12222334555666665333 333322 222333
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--------CHHHHHHhh---hcCcEEEcCCC------eE
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--------NKAQSDNMT---NKWHVYMTKDG------RI 385 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ll---~~~gi~v~~~g------Ri 385 (410)
..+++++..+.+. . +.+. +....+. |.+.|+.+ +.+...++. .++||.+.|++ ||
T Consensus 325 ~g~~l~~~L~~l~---~-~~~~---~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl 396 (420)
T TIGR00700 325 IGRLVTDRLTTLK---A-VDPR---IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRF 396 (420)
T ss_pred HHHHHHHHHHHHH---h-hCCC---EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEE
Confidence 3333332222222 2 2221 2233344 55555432 122222222 35799999863 88
Q ss_pred EecC-CCcccHHHHHHHHHHHhh
Q 015283 386 SLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 386 s~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
+++. .+++++++++++|.+++.
T Consensus 397 ~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 397 LPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred ECCCCcCHHHHHHHHHHHHHHhh
Confidence 8764 589999999999999875
No 188
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.6e-19 Score=165.95 Aligned_cols=322 Identities=14% Similarity=0.073 Sum_probs=210.8
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
|+.+++++|++++....-.+.+..|. .-..+.++.+...+.... .+-+++ +.+||.+.+.+ +.+.+.||
T Consensus 12 GP~~v~~~V~~am~~~~~~h~s~~F~--~~~~~~~~~L~~v~~t~~-----~~~~ll--~gsGt~amEAa--v~sl~~pg 80 (383)
T COG0075 12 GPVPVPPRVLLAMARPMVGHRSPDFV--GIMKEVLEKLRKVFGTEN-----GDVVLL--SGSGTLAMEAA--VASLVEPG 80 (383)
T ss_pred CCCCCCHHHHHHhcCCCCCCCCHHHH--HHHHHHHHHHHHHhcCCC-----CcEEEE--cCCcHHHHHHH--HHhccCCC
Confidence 55667899999887643222212221 223455666666544331 122344 78888989887 56667799
Q ss_pred CEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 129 AKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 129 d~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
|+|++..-+..+ +.++++.+|++++.+.. +++..+|++++++.+++.++ ..++.+.+...+||+ .+++++|+
T Consensus 81 dkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~~~-~~~V~~vH~ETSTGv---lnpl~~I~ 154 (383)
T COG0075 81 DKVLVVVNGKFGERFAEIAERYGAEVVVLEV--EWGEAVDPEEVEEALDKDPD-IKAVAVVHNETSTGV---LNPLKEIA 154 (383)
T ss_pred CeEEEEeCChHHHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcCCC-ccEEEEEeccCcccc---cCcHHHHH
Confidence 999998865543 46789999999999987 57788999999999996443 444555677888999 66888999
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHH--
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQ-- 283 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~-- 283 (410)
++|++||.++|+|.+ +.++..+.+.+.|+ -++++.+.=|.+ ++||+ |.+.+ +++..+++...
T Consensus 155 ~~~k~~g~l~iVDaV-sS~Gg~~~~vd~wg---------iDv~itgSQK~l~~PPGl--a~v~~---S~~a~e~~~~~~~ 219 (383)
T COG0075 155 KAAKEHGALLIVDAV-SSLGGEPLKVDEWG---------IDVAITGSQKALGAPPGL--AFVAV---SERALEAIEERKH 219 (383)
T ss_pred HHHHHcCCEEEEEec-ccCCCcccchhhcC---------ccEEEecCchhccCCCcc--ceeEE---CHHHHHHHhcCCC
Confidence 999999999999999 77775544444443 345555666666 55675 66544 77766655421
Q ss_pred ----------HHhhcc-Cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 284 ----------LKRLAR-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 284 ----------~~~~~~-~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
.+.... ..+. +|+.....++...|+. ...+.++...++.+++...++++++ ++|+....+ .
T Consensus 220 ~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~-----i~~EGle~r~~RH~~~~~a~r~~~~-alGl~~~~~-~ 292 (383)
T COG0075 220 PSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDL-----ILEEGLEARIARHRRLAEALRAGLE-ALGLELFAD-P 292 (383)
T ss_pred CceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHH-----HHHhhHHHHHHHHHHHHHHHHHHHH-HcCCccccC-c
Confidence 111111 2233 4444443443333331 1244568889999999999999999 999632110 0
Q ss_pred cCCccee--eec--CCC-HHHHHHhhhcCcEEEcCCC--------eEE-ecCCCcccHHHHHHHHHHHhhhc
Q 015283 352 LRQIGMF--SFT--GLN-KAQSDNMTNKWHVYMTKDG--------RIS-LAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 352 ~~~~~~~--~~~--~~~-~~~~~~ll~~~gi~v~~~g--------Ris-~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
...+... ++. +.+ .+....+++++|+.+.+|. ||+ ++..+..++..++.+|..++.++
T Consensus 293 ~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 293 ERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred ccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 0111111 122 333 3344478888899998872 997 55568899999999999998765
No 189
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.87 E-value=1.2e-20 Score=183.84 Aligned_cols=320 Identities=13% Similarity=0.070 Sum_probs=194.0
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCC--cccHHHHHHHH---HHhcCCCCCcccCCceEEEecC
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKVTA---ELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~aia---~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
.+++++.|.+ .+. .+..+.++..... ....|.+. .-....++++. +++....|.+ .+++.+ ++
T Consensus 69 ~~~~lg~g~~----~~~-~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~--~~~v~~--~~ 136 (447)
T PRK00451 69 YPSFLGAGAY----DHY-IPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTGMD--VANASM--YD 136 (447)
T ss_pred CcccCccccc----CCc-CcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCC--cceEEe--cC
Confidence 5678888886 322 2445544443221 11335441 11223444444 2334444443 457888 99
Q ss_pred ChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhh----CCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEE
Q 015283 110 SGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL 184 (410)
Q Consensus 110 ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~i 184 (410)
||+++++.+. .+. ..+||+|+++++.|+.+...++. .|.+++.+++. ++ .+|++++++.+++ +++++
T Consensus 137 g~t~~~~~~~--~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~--~~-~~d~~~l~~~i~~---~t~~v 208 (447)
T PRK00451 137 GATALAEAAL--MAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE--DG-VTDLEALEAAVDD---DTAAV 208 (447)
T ss_pred cHHHHHHHHH--HHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC--CC-CCCHHHHHHhcCC---CeEEE
Confidence 9999888763 333 35899999999999998877654 68899999873 34 7899999998874 67777
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc--cccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe---cccccccc
Q 015283 185 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF--DVAYQGFASGSLDNDASSVRLFATRGMELLVAQ---SYSKNLGL 259 (410)
Q Consensus 185 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~--Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---S~sK~~~~ 259 (410)
++++| ||||.+ .++++|.++|+++|+++++ |.+..++... ....+.+++++ +|||.+.+
T Consensus 209 ~l~~p-n~tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g~~~~------------~~~~~~D~~~~s~~k~~~~~~~ 272 (447)
T PRK00451 209 VVQYP-NFFGVI---EDLEEIAEIAHAGGALFIVGVDPVSLGLLKP------------PGEYGADIVVGEGQPLGIPLSF 272 (447)
T ss_pred EEECC-CCCCee---CCHHHHHHHHHHCCCEEEEEcChHHhccCCC------------cccCCCCEEEECCCcCCCCCCC
Confidence 87888 899996 4577888889999999988 5442211100 01223445555 67888888
Q ss_pred cCCCcceEEEEeCCchhHHHHHHH------------------------HHhhccCccc-CCChhHH-HHHHHHhCChhhH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQ------------------------LKRLARPMYS-NPPVHGA-RIVANVVGNPALF 313 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~-~~~~~~~-~~a~~~l~~~~~~ 313 (410)
+|+|+||+++ ++++++.+... .+.. ..+.. ..+...+ .++...+...
T Consensus 273 ~Gpg~G~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aaa~~l~~~--- 345 (447)
T PRK00451 273 GGPYLGFFAT---RKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRRE-KATSNICTNQALNALAAAIYMSLL--- 345 (447)
T ss_pred CCCCchHHHh---hHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccc-cccccccccHHHHHHHHHHHHHHH---
Confidence 8999999854 66655442100 0000 01111 1111112 1221111100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeee--cC--CC-HHHHHHhhhcCcEEE-cCC-----
Q 015283 314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--TG--LN-KAQSDNMTNKWHVYM-TKD----- 382 (410)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--~~--~~-~~~~~~ll~~~gi~v-~~~----- 382 (410)
-.+.+++.++++.++++++.+.|+ +++. +++. .+++|.+ +. .+ .++.++|++ +||.+ .++
T Consensus 346 --~~~g~~~~~~~~~~~~~~l~~~L~-~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~~-~gi~~~~~~~~~~~ 416 (447)
T PRK00451 346 --GPEGLRELAEQNHQKAHYLAERLA-EIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALLE-KGILGGYDLGRYYP 416 (447)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHh-hcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHHh-cCCCCCcccccccC
Confidence 023457888999999999999998 7752 3443 3344433 33 23 445667766 46653 111
Q ss_pred ---C--eEEecC-CCcccHHHHHHHHHHHh
Q 015283 383 ---G--RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 383 ---g--Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
+ |+++.. .|+++++++++.|++++
T Consensus 417 ~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 417 ELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 2 888753 38999999999999875
No 190
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.87 E-value=3.5e-20 Score=178.69 Aligned_cols=338 Identities=14% Similarity=0.074 Sum_probs=204.8
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
+...+|+..|..-...|+. +|.+.+++.+++.... ..|.+..+..+|.+.+++.+.. .+.+.+ +++|+
T Consensus 49 G~~~lD~~~g~~~~~lGh~--~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~~~-------~~~v~~--~~sGs 116 (426)
T PRK00062 49 GNEYIDYVGSWGPMILGHA--HPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELVPS-------IEMVRM--VNSGT 116 (426)
T ss_pred CCEEEEcccchhhhhcCCC--CHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCC-------CCEEEE--ecCHH
Confidence 3578999988753345664 5889988888886543 4455666677888888877421 357888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCC------------CccceeeecCCCcccChhhHHHHHhcCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV------------PWSEYRYYDPKTVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 179 (410)
+|++.+.++...+..+++|+..+++|.++...+.. .|. ....++.....-.-.|++.+++.+.+..+
T Consensus 117 eA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 196 (426)
T PRK00062 117 EATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGD 196 (426)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCC
Confidence 99999988776666678999999999887632221 110 00000000000001378888888865444
Q ss_pred CcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 180 GSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
+..++++.....-+|.+.+ .+.+++|.++|++||+++|+||+|.++..+. .+.... .+..++ +.++||.++
T Consensus 197 ~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~~~-~~~~pD---i~~~gK~l~ 268 (426)
T PRK00062 197 EIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQGY-YGVTPD---LTTLGKIIG 268 (426)
T ss_pred cEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHHHH-hCCCcc---hHhhhhHhh
Confidence 5666665544555888776 7779999999999999999999998875331 112211 122223 358999998
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh---CChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
.|+++|+++. ++++++.+.........+++ +.+...+.++...| +++++ .++.++.....++.|.
T Consensus 269 -~G~p~ga~~~---~~~i~~~~~~~~~~~~~~T~-~~~p~~~aaa~a~L~~~~~~~~-------~~~~~~~~~~~~~~l~ 336 (426)
T PRK00062 269 -GGLPVGAFGG---RREIMEQLAPLGPVYQAGTL-SGNPLAMAAGLATLKLLKEPGF-------YEELEALTKRLAEGLK 336 (426)
T ss_pred -CCCcceeeeE---HHHHHHhhccCCCceecccC-cCCHHHHHHHHHHHHHHhcchH-------HHHHHHHHHHHHHHHH
Confidence 8899999744 77755554321011112222 33444444443333 33221 2333333344444444
Q ss_pred HHhhhccCCCCCccc-ccCCcceeee-cCC------------C----HHHHHHhhhcCcEEEcCCC----eEEecCCCcc
Q 015283 336 DSLSAKDKSGKDWSF-ILRQIGMFSF-TGL------------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSLA 393 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~-~~~~~~~~~~-~~~------------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~~ 393 (410)
+..+ +.+. .. ..+.+.++.+ +.. + ..+...+++ +||.+.+.+ |+++. ++++
T Consensus 337 ~~~~-~~~~----~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~Gv~v~~~~~~~~~~~~~-~t~~ 409 (426)
T PRK00062 337 EAAK-KAGI----PLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLD-EGVYLAPSQFEAGFVSAA-HTDE 409 (426)
T ss_pred HHHH-HcCC----ceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHH-CCeEeecCCcCceeeecc-CCHH
Confidence 4333 4442 22 2344444422 111 1 123445555 699998865 77754 4999
Q ss_pred cHHHHHHHHHHHhhhc
Q 015283 394 KCEYLADAIIDSYHNV 409 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~~ 409 (410)
++++++++|++++..+
T Consensus 410 ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 410 DIEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 191
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.1e-19 Score=165.39 Aligned_cols=327 Identities=15% Similarity=0.131 Sum_probs=212.3
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
....|||..|.-....|+. +|.+.+++.++.+. .....|. .....++.+.+++... . .+.+.+ .++
T Consensus 41 G~~YlDf~~Giav~~lGH~--hP~iv~al~~Q~~kl~h~sn~~~-~~~~~~la~~L~~~s~-~------~d~vff--~NS 108 (404)
T COG4992 41 GREYLDFAAGIAVNNLGHC--HPALVEALKEQAEKLWHVSNLFY-NEPQAELAEKLVELSP-F------ADRVFF--CNS 108 (404)
T ss_pred CCEeeeeccceeeeccCCC--CHHHHHHHHHHHHHhhhcccccC-ChHHHHHHHHHHhhCc-c------ccEEEE--cCC
Confidence 3568999988775667775 69999999887744 2223342 2333455555555532 1 588999 999
Q ss_pred hhhHHHHHHHHHHHhCC---CCEEEEcCCCCcchhh-------------hhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283 111 GTGSLRLAAALIERYFP---GAKVLISSPTWGNHKN-------------IFNDARVPWSEYRYYDPKTVGLDFEGMIADI 174 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~---gd~Vl~~~p~y~~~~~-------------~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 174 (410)
|++|++.++++.+.+.. ..+|+...-+|.+..- .+...=..+..+|+ -|++.+++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai 181 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAI 181 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHh
Confidence 99999999999988764 2477777766644322 11111112233333 3899999999
Q ss_pred hcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283 175 KAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 253 (410)
Q Consensus 175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 253 (410)
++ .+..+++-..+-..|+..+..+ ++++.++|++||+++|.||++.+++- ..+.|....+ +-.++++ ++
T Consensus 182 ~~---~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GR---TGk~fA~e~~-gV~PDI~---tl 251 (404)
T COG4992 182 DE---DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGR---TGKLFAYEHY-GVEPDIL---TL 251 (404)
T ss_pred cc---CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCc---cchHHHHHHh-CCCCCEE---Ee
Confidence 87 7888888888999999887777 99999999999999999999999883 3455544333 2233555 68
Q ss_pred cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
.|.+| .|+.+|.+.. +++. ...+......++.+.+.++..++ ...+.++ ...++.+++
T Consensus 252 aK~Lg-GG~PigA~la---~~~~----~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e-----------~ll~~v~~~ 312 (404)
T COG4992 252 AKALG-GGFPIGAMLA---TEEI----ASAFTPGDHGSTFGGNPLACAVALAVLEVLLEE-----------GLLENVREK 312 (404)
T ss_pred ecccc-CCccceeeEE---chhh----hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcch-----------hHHHHHHHH
Confidence 99999 7899999844 4442 22232222222333444444443 4444444 334556666
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecCC--C---HHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLAD 400 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~---~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~ 400 (410)
.+++.+.|+ ++..+.++....+.-|.++=+.+ + .+.+..+.+ .|+.+.+.| ||..+- +++++++++++
T Consensus 313 g~~~~~~L~-~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~-~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~ 390 (404)
T COG4992 313 GEYLLQRLR-ELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALRE-EGVLVLPAGPNVIRFLPPLVITEEEIDEALD 390 (404)
T ss_pred HHHHHHHHH-HHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHH-CCeEEecCCCCeEEecCCccCCHHHHHHHHH
Confidence 666777776 65422111122234454433333 2 445666665 599998876 887553 59999999999
Q ss_pred HHHHHhhhc
Q 015283 401 AIIDSYHNV 409 (410)
Q Consensus 401 ~l~~~l~~~ 409 (410)
+|++++...
T Consensus 391 ~l~~~l~~~ 399 (404)
T COG4992 391 ALERALAAA 399 (404)
T ss_pred HHHHHHHHh
Confidence 999998753
No 192
>PLN02624 ornithine-delta-aminotransferase
Probab=99.87 E-value=1.3e-19 Score=176.39 Aligned_cols=332 Identities=11% Similarity=0.057 Sum_probs=197.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|.--...|+. +|.+.+++.+.+... +...+.......++.+.+++++ . .+.+.+ +++|+
T Consensus 75 ~~ylD~~sg~~~~~~Gh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~-~-------~~~~~f--~~SGs 142 (474)
T PLN02624 75 KKYLDFLSAYSAVNQGHC--HPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF-G-------YDMVLP--MNTGA 142 (474)
T ss_pred CEEEEcccchhcccCCCC--CHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc-C-------CCeEEE--eCChH
Confidence 356777766432233443 689999988887542 1111123344567777777763 1 257888 89999
Q ss_pred hHHHHHHHHHHHhC-------CCC-EEEEcCCCCcchhhh-hhhCCC------------CccceeeecCCCcccChhhHH
Q 015283 113 GSLRLAAALIERYF-------PGA-KVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 113 ~a~~~~~~~~~~~~-------~gd-~Vl~~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~~~~~d~~~l~ 171 (410)
+|++.+.++.+.+. +++ .|+...-+|.+.... +...+- .+..++. .|++.++
T Consensus 143 eA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 215 (474)
T PLN02624 143 EGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALE 215 (474)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHH
Confidence 99999988776542 133 566666666554221 211110 1111221 2678888
Q ss_pred HHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 172 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
+.++..+++..++++.+++|++|.+++.++ +++|.++|++||+++|+||+|.+++.. ...+.... ....++++
T Consensus 216 ~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Grt---G~~~a~~~-~~i~pDiv-- 289 (474)
T PLN02624 216 KIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLART---GKMLACDW-EEVRPDVV-- 289 (474)
T ss_pred HHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcC---cchhhHHh-cCCCCCEE--
Confidence 888765556788888999999999988776 999999999999999999999887643 22222211 12223333
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
++||.+|.+++++|++++ ++++.+.+ .......+.+.+.+++.++...|+. +. + ....+++.++
T Consensus 290 -~lsK~lggG~~pigav~~---~~~i~~~~----~~~~~~~T~~g~pl~~aaa~aaLe~--l~----~--~~l~~~~~~~ 353 (474)
T PLN02624 290 -ILGKALGGGVIPVSAVLA---DKDVMLCI----KPGEHGSTFGGNPLASAVAMAALQV--VQ----D--EKLAERSAKL 353 (474)
T ss_pred -EecccccCCCCcceeeee---cHHHHhHh----ccCCcCCCCCCCHHHHHHHHHHHHH--HH----h--chHHHHHHHH
Confidence 468999977799999854 66644433 2222222223455555555444431 10 0 1223344444
Q ss_pred HHHHHHHhhhccCC--CCCcccccCCcceee-ecCCC-------HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccH
Q 015283 331 RQKLFDSLSAKDKS--GKDWSFILRQIGMFS-FTGLN-------KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKC 395 (410)
Q Consensus 331 ~~~l~~~l~~~~g~--~~~~~~~~~~~~~~~-~~~~~-------~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i 395 (410)
.+.+.+.|. ++.. +..+....+.+.++. +++.. .++...+ .++||++.|++ ||+++ ..+++++
T Consensus 354 ~~~l~~~L~-~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L-~e~GV~v~p~~~~~lR~~p~l~~t~e~i 431 (474)
T PLN02624 354 GQELRDQLQ-KIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKL-KERGLLAKPTHDTIIRLAPPLSISEDEL 431 (474)
T ss_pred HHHHHHHHH-HHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHH-HhCCeEEecCCCCEEEEECCccCCHHHH
Confidence 455555554 4321 001222334444443 33321 1334555 45799999875 88753 3599999
Q ss_pred HHHHHHHHHHhhh
Q 015283 396 EYLADAIIDSYHN 408 (410)
Q Consensus 396 ~~~~~~l~~~l~~ 408 (410)
++++++|++++.+
T Consensus 432 d~~l~~L~~~l~~ 444 (474)
T PLN02624 432 QECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 193
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=5.7e-20 Score=174.45 Aligned_cols=320 Identities=12% Similarity=0.031 Sum_probs=195.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
.++++|+.++||....+ |.++++..+++.. +. ...++...-+.+|.+.+++++.. +..++
T Consensus 102 r~~l~FsSndYLGL~~~----p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~--------e~all-- 167 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSH----PTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK--------EDCLV-- 167 (476)
T ss_pred ceEEEeeccCccCCCCC----HHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC--------CcEEE--
Confidence 36799999999766655 5555555444422 11 01111122347899999999633 33444
Q ss_pred cCChhhHHHHHHHHHHH------------hCCCCEEEEcCCCCcchhhhhhhC----CCCccceeeecCCCcccChhhHH
Q 015283 108 GLSGTGSLRLAAALIER------------YFPGAKVLISSPTWGNHKNIFNDA----RVPWSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~------------~~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~ 171 (410)
.++|..|+..++..+.. ..++|.|+...-.|.+....++.. ++++..+++ .|+++|+
T Consensus 168 ~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le 240 (476)
T PLN02955 168 CPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLN 240 (476)
T ss_pred ECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHH
Confidence 47787777766433311 124567777777888887777655 456666665 3889999
Q ss_pred HHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 172 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
+.++..+.+..++++....+++|.+.+ +++|.++|++||.++|+||+|..+..+..... ....+.-..+.+++++
T Consensus 241 ~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G--~~e~~g~~~di~ii~~ 315 (476)
T PLN02955 241 SLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGG--VAEEFNCEADVDLCVG 315 (476)
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCc--HHHHhCCCCCCcEEEE
Confidence 988765555667777778999999776 66666668999999999999887766531111 1112222346789999
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH--HHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
||||++|..| |++ ++++++++.+......+.+++ ..++..+..+. ...+..+ ...++++++
T Consensus 316 TLsKA~G~~G---Gfi---~gs~~~~~~l~~~~~~~ifSt-alpp~~aaa~laal~l~~~~----------~~~r~~L~~ 378 (476)
T PLN02955 316 TLSKAAGCHG---GFI---ACSKKWKQLIQSRGRSFIFST-AIPVPMAAAAYAAVVVARKE----------KWRRKAIWE 378 (476)
T ss_pred eCccchhccC---cee---ecHHHHHHHHHHhCCCCeecc-cccHHHHHHHHHHHHHHhcC----------HHHHHHHHH
Confidence 9999987665 885 347776665554333332222 22222222221 2222211 245567777
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCccee-eecCCC---HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcc
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLA 393 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~---~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~ 393 (410)
+.+++.+. .| +.. .+.++ ++++.. .++.++|++ .||++.+- | ||++.. .+++
T Consensus 379 n~~~fr~~----~G----~~~---~sPI~pI~ig~~~~a~~~~~~L~~-~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~e 446 (476)
T PLN02955 379 RVKEFKAL----SG----VDI---SSPIISLVVGNQEKALKASRYLLK-SGFHVMAIRPPTVPPNSCRLRVTLSAAHTTE 446 (476)
T ss_pred HHHHHHHh----cC----CCC---CCCEEEEEeCCHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCceEEEeeCCCCCHH
Confidence 77777652 23 222 12233 444542 233556665 69998542 2 888765 5999
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
||+++++.|+++...
T Consensus 447 dId~lv~~L~~~~~~ 461 (476)
T PLN02955 447 DVKKLITALSSCLDF 461 (476)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999987643
No 194
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.87 E-value=7.6e-20 Score=175.79 Aligned_cols=334 Identities=11% Similarity=0.069 Sum_probs=195.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.--...|+. +|.+.+++.+++.......+. +..-..++.+.+++..... ..+.+.+ +++|
T Consensus 40 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~~~f--~~sG 110 (421)
T PRK09792 40 NEYIDFAAGIAVLNTGHR--HPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVS-----GQAKTAF--FTTG 110 (421)
T ss_pred CEEEEccCchhhhcCCCC--CHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCC-----CCceEEE--eCCh
Confidence 467888777542344554 588888888877542212221 2222235555555542111 1257888 8899
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCC-------------CccceeeecCCCc---ccChhhHHHHH
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYDPKTV---GLDFEGMIADI 174 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~~~~~---~~d~~~l~~~i 174 (410)
++|++.+.++.+.+....+|+....+|.+.... +...|. .+..+|....... .-+++.+++.+
T Consensus 111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~ 190 (421)
T PRK09792 111 AEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLF 190 (421)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHH
Confidence 999999988887765556888888877665321 111111 1222222111100 01346777777
Q ss_pred hc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 175 KA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 175 ~~--~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
.+ .+++..++++...++|+|..+ +.+.+++|.++|++||+++|+||++.+|+.. ...+....+ ...++ +.
T Consensus 191 ~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---G~~~a~~~~-~~~pD---i~ 263 (421)
T PRK09792 191 KSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFART---GKLFAMDHY-ADKPD---LM 263 (421)
T ss_pred HhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC---CchhHHHhc-CCCCc---EE
Confidence 63 123456666666699999876 7888999999999999999999999998753 233443333 22223 46
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
+|||.++ +|+|+||+++ ++++.+.+.. .....+...+.+++.++ ...+++++ ..++++
T Consensus 264 t~gK~l~-~G~pigav~~---~~~i~~~~~~----~~~~~T~~gnpl~~aaa~a~l~~l~~~~-----------~~~~~~ 324 (421)
T PRK09792 264 TMAKSLA-GGMPLSGVVG---NANIMDAPAP----GGLGGTYAGNPLAVAAAHAVLNIIDKES-----------LCERAN 324 (421)
T ss_pred Eeehhhc-CCCceEEEEE---cHHHHhccCC----CCcCCCCCCCHHHHHHHHHHHHHHHhhh-----------HHHHHH
Confidence 8999998 8999999755 7775444321 11222224445555543 33443332 222233
Q ss_pred HHHHHHHHHhh---hccCCCCCcccccCCcceeeecCCC------------HHHHHHhhhcCcEEEcCCC------eEEe
Q 015283 329 NVRQKLFDSLS---AKDKSGKDWSFILRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG------RISL 387 (410)
Q Consensus 329 ~~~~~l~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ll~~~gi~v~~~g------Ris~ 387 (410)
+..+++.+.|+ ++.+ ........|.+.|+.+. ..+..++++ +||.+.+.| ||.+
T Consensus 325 ~~g~~l~~~l~~l~~~~p----~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~g~~~~~irl~P 399 (421)
T PRK09792 325 QLGQRLKNTLIDAKESVP----AIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLTCGAYGNVIRFLY 399 (421)
T ss_pred HHHHHHHHHHHHHHHhCC----CcceecccceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEeecCCCCCEEEEeC
Confidence 33333333333 0233 11122233777776541 123445555 699986532 7876
Q ss_pred cC-CCcccHHHHHHHHHHHhh
Q 015283 388 AG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 388 ~~-~~~~~i~~~~~~l~~~l~ 407 (410)
+. ++++++++++++|.+++.
T Consensus 400 ~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 400 PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCcCCHHHHHHHHHHHHHHHh
Confidence 65 699999999999999875
No 195
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.87 E-value=1.4e-19 Score=172.25 Aligned_cols=216 Identities=14% Similarity=0.075 Sum_probs=143.5
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh----CCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----ARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~----~g~ 150 (410)
+.....+|++.+++++.. ++.++ +++|+.++..+ +...+.+||+|+++.|.|+.....+.. .|.
T Consensus 59 ~~pt~~~Le~~lA~l~G~-------~~al~---~~sG~~Ai~~~--l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi 126 (386)
T PRK06767 59 GNPTVKLFEERMAVLEGG-------EEALA---FGSGMAAISAT--LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI 126 (386)
T ss_pred CCcchHHHHHHHHHHhCC-------CcEEE---ECCHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence 455678999999999642 34454 47788888776 444577999999999999876655543 333
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++. .|++.+++.+.+ +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|......
T Consensus 127 ~~~~~~~-------~d~~~l~~~i~~---~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~-- 191 (386)
T PRK06767 127 THSFCDM-------ETEADIENKIRP---NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ-- 191 (386)
T ss_pred EEEEeCC-------CCHHHHHHhhCc---CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 3332222 378888888864 6778888999999999776 567777799999999999998643321
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
. ++ ....++++.|+||.++.+|.++ ||++. +++.++++........ ....+...+.++...|+.
T Consensus 192 -~---pl-----~~g~Div~~S~sK~l~g~g~~~gG~v~~---~~~~i~~~~~~~~~~~---g~~~~~~~a~l~~~~L~t 256 (386)
T PRK06767 192 -R---PL-----ELGCDAVVHSATKYIGGHGDVVAGVTIC---KTRALAEKIRPMRKDI---GGIMAPFDAWLLLRGLKT 256 (386)
T ss_pred -C---ch-----hcCCcEEEecCcceecCCCCceeEEEEe---ChHHHHHHHHHHHHHh---CCCCCHHHHHHHHcCCCc
Confidence 1 11 1134688899999998889886 77633 6666655544333221 122233333333333332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
. ....++.+++...+.+.|+ +.+
T Consensus 257 l----------~~r~~~~~~~a~~la~~L~-~~p 279 (386)
T PRK06767 257 L----------AVRMDRHCDNAEKIVSFLK-NHD 279 (386)
T ss_pred H----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 2 3444566778888888888 764
No 196
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.86 E-value=5.6e-20 Score=173.59 Aligned_cols=276 Identities=16% Similarity=0.111 Sum_probs=177.4
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----h
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~ 146 (410)
.+| +.....+|+++++++. . ++.++ +.+|+.++..+ +...+.+||+|+++.|+|..+...+ .
T Consensus 46 ~ry-~~p~~~~Le~~lA~l~-~-------~~~v~---~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~ 111 (366)
T PRK07582 46 GRA-SNPTWRALEAALGELE-G-------AEALV---FPSGMAAITAV--LRALLRPGDTVVVPADGYYQVRALAREYLA 111 (366)
T ss_pred ECC-CCccHHHHHHHHHHHc-C-------CCEEE---ECCHHHHHHHH--HHHhcCCCCEEEEeCCCcHhHHHHHHHHHh
Confidence 445 6678899999999995 2 34454 47888888877 4445789999999999998886644 4
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.+++.++..+. .+ .+. +++.++++++|+||||.+ .++++|+++|+++|+++|+|++|....
T Consensus 112 ~~G~~v~~v~~~~~------~~----~~~---~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~ 175 (366)
T PRK07582 112 PLGVTVREAPTAGM------AE----AAL---AGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL 175 (366)
T ss_pred cCeEEEEEECCCCh------HH----Hhc---cCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc
Confidence 57888888876211 11 122 256777789999999974 467888888999999999999985322
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
+ .. ++ +. ..+++++|+||.+ |.+|+|+||+ +++++++++++..... .....++...+..+..
T Consensus 176 -~---~~--p~----~~-g~Divv~S~sK~l~G~~g~~~G~v--~~~~~~l~~~l~~~~~----~~g~~~~~~~a~l~~r 238 (366)
T PRK07582 176 -G---QR--PL----EL-GADLVVASDTKALTGHSDLLLGYV--AGRDPELMAAVERWRL----LAGAIPGPFEAWLAHR 238 (366)
T ss_pred -c---cC--ch----hc-CCcEEEecccccccCCCCeeEEEE--EcCcHHHHHHHHHHHH----HhCCCCCHHHHHHHHh
Confidence 1 11 11 11 2357889999998 4577999997 4456676666554322 2233445555555555
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc----ccC-----------Ccceeeec-CCCHHHHH
Q 015283 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF----ILR-----------QIGMFSFT-GLNKAQSD 369 (410)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~~~-----------~~~~~~~~-~~~~~~~~ 369 (410)
.|+..+ ...++..++...+.+.|+ +.+.-..+.+ ..| .+|++.|. + +.+.+.
T Consensus 239 ~l~tl~----------~R~~~~~~na~~la~~L~-~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~ 306 (366)
T PRK07582 239 SLGTLG----------LRFARQCANALAVAELLA-GHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAE 306 (366)
T ss_pred ccccHH----------HHHHHHHHHHHHHHHHHH-hCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHH
Confidence 555432 223455567777777776 5542110110 011 34555432 2 555566
Q ss_pred HhhhcCcEEEc-C--------------------CC--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 370 NMTNKWHVYMT-K--------------------DG--RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 370 ~ll~~~gi~v~-~--------------------~g--Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+++++.++... + .+ |+|++- |+.+.+++.|.++++.
T Consensus 307 ~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~ 365 (366)
T PRK07582 307 RFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA 365 (366)
T ss_pred HHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 66666565442 1 12 889854 7889999999988875
No 197
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.86 E-value=2e-19 Score=174.55 Aligned_cols=340 Identities=13% Similarity=0.077 Sum_probs=190.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|.--...|+. +|.+.+++.+++........ ....-..++.+.+++.+.... .+.+.+ +++|
T Consensus 54 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~-----~~~v~f--~~sG 124 (451)
T PRK06918 54 NQYIDFAGAIGTINVGHS--HPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSF-----DKKVLF--LNSG 124 (451)
T ss_pred CEEEEcCCchhhcCCCCC--CHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCC-----CCEEEE--cCCc
Confidence 457888777542344554 58899998888754221111 112223455555555532211 257899 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCC-------------CccceeeecC--CCcccC--------h
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV-------------PWSEYRYYDP--KTVGLD--------F 167 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~--~~~~~d--------~ 167 (410)
++|++.+.++.+.+....+|+....+|.+...... ..+. .+..+|..+. ...... +
T Consensus 125 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (451)
T PRK06918 125 AEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMI 204 (451)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHH
Confidence 99999999988877655788888888866543222 1110 1112222100 000110 1
Q ss_pred hhHHHHHhc--CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 168 EGMIADIKA--APGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 168 ~~l~~~i~~--~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
+.+++.+.. .++...++++...+...|.+++.++ +++|.++|++||+++|+||+|.+|+..+ ..+....+ +..
T Consensus 205 ~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g---~~~a~~~~-~v~ 280 (451)
T PRK06918 205 EEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG---KYFAIEHF-DVV 280 (451)
T ss_pred HHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC---ceehhHhc-CCC
Confidence 223333321 1234555554433444476565555 9999999999999999999999997532 23333222 212
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh---CChhhHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEME 321 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~ 321 (410)
++ +.|+||.++ +|+|+||+++ ++++.+.+ .......+.+.+.+++.++...| .++.+ .++.+
T Consensus 281 pD---i~t~sK~l~-~G~pig~v~~---~~~i~~~~----~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~----~~~~~ 345 (451)
T PRK06918 281 PD---LITVSKSLG-AGVPISGVIG---RKEIMDES----APGELGGTYAGSPLGCAAALAVLDIIEKENL----NDRAI 345 (451)
T ss_pred CC---EEeeehhhc-CCCccEEEEE---cHHHHhcc----CCCCcCcCCCcCHHHHHHHHHHHHHHHHCCH----HHHHH
Confidence 33 448999999 8999999855 67744443 22222233345666666644333 33322 22233
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-------C-CHHH----HHHhhhcCcEEEcCCC------
Q 015283 322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------L-NKAQ----SDNMTNKWHVYMTKDG------ 383 (410)
Q Consensus 322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-------~-~~~~----~~~ll~~~gi~v~~~g------ 383 (410)
+..+.+.+..+.+.+ +.+. +....+.++++.|.- . +... ...+ .++||.+.|++
T Consensus 346 ~~g~~l~~~l~~l~~----~~~~---~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~~~~l 417 (451)
T PRK06918 346 ELGKVVMNRFEEMKN----KYNC---IGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTYGNVI 417 (451)
T ss_pred HHHHHHHHHHHHHHh----hCCC---ceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCCCCEE
Confidence 333333332222221 1221 122445666665431 1 1222 2333 45799998863
Q ss_pred eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 384 RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++. ++++++++++++|.+++..+
T Consensus 418 rl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 418 RVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 888765 68999999999999998653
No 198
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.86 E-value=2.7e-19 Score=171.93 Aligned_cols=330 Identities=9% Similarity=0.054 Sum_probs=202.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+.+|..-...|+. +|.+.+++.+.+... +...........++.+.+++++ + .+.+.+ +++|+
T Consensus 37 ~~~lD~~s~~~~~~~Gh~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~SGs 104 (401)
T TIGR01885 37 KRYLDFLSAYSAVNQGHC--HPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLP--MNTGA 104 (401)
T ss_pred CEEEEcccCHhhccCCCC--CHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEE--eCccH
Confidence 567899887431123333 688888888776431 1111112334456777777764 2 257788 89999
Q ss_pred hHHHHHHHHHHHh-------CCC-CEEEEcCCCCcch-hhhhhhCC---------C---CccceeeecCCCcccChhhHH
Q 015283 113 GSLRLAAALIERY-------FPG-AKVLISSPTWGNH-KNIFNDAR---------V---PWSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 113 ~a~~~~~~~~~~~-------~~g-d~Vl~~~p~y~~~-~~~~~~~g---------~---~~~~v~~~~~~~~~~d~~~l~ 171 (410)
+|++.+.++.+.+ .+| +.|+....+|.+. ...+...| . .+..++. .|++.++
T Consensus 105 ~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le 177 (401)
T TIGR01885 105 EAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALE 177 (401)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHH
Confidence 9999997776554 133 5677777776543 33333222 1 1222222 2688898
Q ss_pred HHHhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 172 ADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
+.+++.+++..++++.++++++|.+.+.+ .+++|.++|++||+++|+||+|.+++..+ ..+.. ......++++
T Consensus 178 ~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G---~~~~~-~~~~~~~di~-- 251 (401)
T TIGR01885 178 EALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG---KLLCV-DHENVKPDIV-- 251 (401)
T ss_pred HHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHH-hhcCCCCCEE--
Confidence 88865445667777788899999988755 59999999999999999999998776432 22222 1112223443
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
++||.++.+|+|+||++. ++++++.+... ....++ +.+..++.++...|+.. .+ +...++.+++
T Consensus 252 -~~gK~l~~g~~~ig~v~~---~~~i~~~~~~~---~~~~t~-~~~p~~~~aa~a~L~~i------~~--~~l~~~~~~~ 315 (401)
T TIGR01885 252 -LLGKALSGGVYPVSAVLA---DDDVMLTIKPG---EHGSTY-GGNPLACAVAVAALEVL------EE--EKLAENAEKL 315 (401)
T ss_pred -EeeccccCCCCCcEEEEE---cHHHHhhccCC---CCCCCC-CCCHHHHHHHHHHHHHH------Hh--ccHHHHHHHH
Confidence 467999876699999754 77755544321 112222 33454555554444311 11 1344567777
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceee-ecCCC------HHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFS-FTGLN------KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYL 398 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~------~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~ 398 (410)
.+++.+.|+ +++.+ .+....+.+.++. +++.+ .++..++. ++||.+.|.+ ||+.. ..++++++++
T Consensus 316 ~~~~~~~L~-~l~~~-~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~ 392 (401)
T TIGR01885 316 GEIFRDQLK-KLPKP-IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPTHGNIIRLAPPLVITEEQLDEG 392 (401)
T ss_pred HHHHHHHHH-hccCC-ceeEEeecCeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEecCCCEEEEeCCccCCHHHHHHH
Confidence 888999998 77521 1122234444443 34332 23455555 4699998864 88764 3599999999
Q ss_pred HHHHHHHhh
Q 015283 399 ADAIIDSYH 407 (410)
Q Consensus 399 ~~~l~~~l~ 407 (410)
+++|++++.
T Consensus 393 l~~l~~~l~ 401 (401)
T TIGR01885 393 LEIIKKVID 401 (401)
T ss_pred HHHHHHHhC
Confidence 999998763
No 199
>PRK06460 hypothetical protein; Provisional
Probab=99.86 E-value=8.7e-20 Score=172.78 Aligned_cols=215 Identities=14% Similarity=0.068 Sum_probs=141.8
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCc----chhhhhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWG----NHKNIFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~----~~~~~~~~~g~ 150 (410)
......++++++++++... ..+++ ++|++++..+ +...+.+||+|+++.|.|+ .+...++..|.
T Consensus 43 ~~p~~~~L~~~lA~l~g~~-------~~v~~---~sG~~ai~~~--l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~ 110 (376)
T PRK06460 43 ANPTVLELTKKIVELENAE-------MGVAF---SSGMGAISTT--ALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGV 110 (376)
T ss_pred CCccHHHHHHHHHHHhCCC-------cEEEe---CCHHHHHHHH--HHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCc
Confidence 4567889999999996432 34544 7778888877 3444779999999986553 44566777888
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++.. +.+.+++.+. ++++++++++|+||||.+++.+ +|+++|+++|+++|+|++|......
T Consensus 111 ~v~~~~~~-------~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~~-- 175 (376)
T PRK06460 111 NVDASNPG-------SDNIIEKAKS---KRYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPINQ-- 175 (376)
T ss_pred EEEEECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCccccC--
Confidence 87776641 2233333333 3677888899999999988876 5677799999999999998754211
Q ss_pred CCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
. . + ..+.++++.|+||.++.. +.++||++. ++++++++..... ....+.+.. .+...++.
T Consensus 176 --~--~---l--~~~~divv~S~sK~l~G~~~~~~G~~~~---~~~l~~~l~~~~~----~~g~~~~~~---~a~~~l~~ 236 (376)
T PRK06460 176 --K--P---L--ELGADIVVHSASKFLAGHNDVIAGLAAG---YGKLLNVIDQMRR----TLGTSLDPH---AAYLTLRG 236 (376)
T ss_pred --C--h---h--hcCCCEEEeecceeccCCCCceEEEEec---CHHHHHHHHHHHH----hcCCCCCHH---HHHHHHhc
Confidence 1 1 1 113579999999998522 357899643 7786666654332 112222322 22222333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.+ .++...++..+++..+.+.|+ +.+
T Consensus 237 ~~-------~l~~r~~~~~~n~~~l~~~L~-~~p 262 (376)
T PRK06460 237 IK-------TLKIRMDVINRNAEQIAEFLE-GHP 262 (376)
T ss_pred hh-------hHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 22 235666778888888988888 664
No 200
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.2e-19 Score=172.77 Aligned_cols=216 Identities=18% Similarity=0.160 Sum_probs=147.0
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~ 150 (410)
+.....++++.++++... +..++ +++|++|+..+ +...+.+||+|+++.|+|++.... +...|+
T Consensus 62 ~~p~~~~le~~lA~l~g~--------~~~i~--~ssG~~Ai~~~--l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi 129 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGA--------EAATA--FSTGMAAISNT--LYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGV 129 (398)
T ss_pred CChHHHHHHHHHHHHhCC--------CeEEE--eCChHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCe
Confidence 455678999999999643 23344 58888888887 444577999999999999876443 446677
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++. .|++.+++.+++ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|..+...
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~~---~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-- 194 (398)
T PRK08249 130 DVTLCET-------GDHEQIEAEIAK---GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-- 194 (398)
T ss_pred EEEEcCC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC--
Confidence 7666543 488999998875 6788888999999999876 556777799999999999998865422
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
. ++ . ....++++|+||.++.+|.++|++ ++.++++++++..... ......+...+.++...++.
T Consensus 195 --~--~l----~-~~~Divv~S~sK~l~g~~~~~gG~--vv~~~~l~~~l~~~~~----~~g~~~s~~~a~l~l~~l~t- 258 (398)
T PRK08249 195 --N--PL----A-LGADLVIHSATKFLSGHADALGGV--VCGSKELMEQVYHYRE----INGATMDPMSAYLILRGMKT- 258 (398)
T ss_pred --C--ch----h-hCCCEEeccCceecCCCCCceEEE--EECCHHHHHHHHHHHH----hcCCCCCHHHHHHHHhCcch-
Confidence 1 11 1 123478899999998778777554 3447776666654322 12223444443434333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
+....++..+++..+.+.|+ +.+
T Consensus 259 ---------L~~R~~~~~~na~~la~~L~-~~p 281 (398)
T PRK08249 259 ---------LKLRVRQQQESAMALAKYLQ-THP 281 (398)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence 23334555667777777777 654
No 201
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.86 E-value=2.5e-19 Score=169.71 Aligned_cols=222 Identities=13% Similarity=0.080 Sum_probs=147.5
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CC
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR 149 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g 149 (410)
.+| +.....+++++++++.. .+++++ ++||++++.++. ...+.+||+|+++.|+|+.....+.. .+
T Consensus 46 ~R~-~~p~~~~le~~lA~l~g--------~~~v~~--~~gg~~Ai~~~l--~all~~GD~Vl~~~p~y~~~~~~~~~~~~ 112 (382)
T TIGR02080 46 SRS-GNPTRDLLQQALAELEG--------GAGAVV--TNTGMSAIHLVT--TALLGPDDLLVAPHDCYGGTYRLLNALAK 112 (382)
T ss_pred cCC-CCchHHHHHHHHHHHhC--------CCcEEE--EcCHHHHHHHHH--HHHcCCCCEEEEcCCCcHHHHHHHHHHHh
Confidence 555 45567899999999853 246777 899999999983 44478999999999999876554432 22
Q ss_pred CCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC
Q 015283 150 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 229 (410)
Q Consensus 150 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 229 (410)
.....+...+. .|++.+++.+++ +++++++++|+||||.+++ +++|+++|+++|+++|+|++|..+...
T Consensus 113 ~~~~~v~~~d~----~d~~~l~~ai~~---~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~- 181 (382)
T TIGR02080 113 KGCFRVLFVDQ----GDEQALRAALAQ---KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ- 181 (382)
T ss_pred hcCeEEEEECC----CCHHHHHHhcCc---CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence 22233333221 378889888875 6788888999999999876 456777799999999999999765421
Q ss_pred CCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283 230 LDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308 (410)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~ 308 (410)
. ++ . . ..+++++|+||.++ .+|++.|++ +++++++++++..... ......+.+.+..+...++
T Consensus 182 ---~--pl-~---~-gaDivv~S~sK~l~G~~~~~~G~i--~~~~~~~~~~l~~~~~----~~g~~~sp~~a~l~lr~l~ 245 (382)
T TIGR02080 182 ---N--PL-A---L-GADLVLHSCTKYLNGHSDVIAGAV--IAKDPQVAEELAWWAN----NLGVTGGAFDSYLTLRGLR 245 (382)
T ss_pred ---C--ch-h---h-CCCEEEeecceeccCCCCceeEEE--EeCCHHHHHHHHHHHH----ccCCCCCHHHHHHHHcccc
Confidence 1 11 1 1 23588899999885 577889997 4556776666543222 1222344444333333333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
. +....++..++...+.+.|+ ..+
T Consensus 246 t----------l~~R~~~~~~na~~~a~~L~-~~p 269 (382)
T TIGR02080 246 T----------LVARMRLQQRNAQAIVEYLQ-TQP 269 (382)
T ss_pred h----------HHHHHHHHHHHHHHHHHHHH-hCC
Confidence 2 22334455567777777776 554
No 202
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=1.5e-19 Score=173.70 Aligned_cols=340 Identities=13% Similarity=0.066 Sum_probs=206.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.--...|+. +|.+.+++.+++.......+ .+.....++.+.+++..... ..+.+.+ +++|
T Consensus 40 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~~~f--~~sG 110 (421)
T PRK06777 40 REYIDFAAGIAVLNTGHR--HPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPID-----GPAKTAF--FTTG 110 (421)
T ss_pred CEEEEcccCHHhhccCCC--CHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCC-----CCceEEE--eCCc
Confidence 467888777532234554 58888888888755321222 12233345666666553211 1357888 8999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCC-------------ccceeeecCCC---cccChhhHHHHH
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVP-------------WSEYRYYDPKT---VGLDFEGMIADI 174 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~-------------~~~v~~~~~~~---~~~d~~~l~~~i 174 (410)
++|++.+.++.+.+....+|+..+.+|.+...... ..+.. +..++..+... ..-+++.+++.+
T Consensus 111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~ 190 (421)
T PRK06777 111 AEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLF 190 (421)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHH
Confidence 99999998888777655788888888876643322 11210 11112111000 012356677777
Q ss_pred hc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 175 KA--APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 175 ~~--~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
.+ .++...++++...++..|. +++.+.+++|.++|++||+++|.||+|.+|+.. ...+....+ +..++++
T Consensus 191 ~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---g~~~~~~~~-~~~pDiv--- 263 (421)
T PRK06777 191 KADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFART---GKLFAMEYY-DVKPDLI--- 263 (421)
T ss_pred HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccC---Cchhhhhhc-CCCCCEE---
Confidence 53 2345666676667888886 578888999999999999999999999988743 223332222 2223433
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
++||.++ +|+|+||+++ ++++.+.+. ......+.+.+.+++.++...|+.. ++ +...++++++.
T Consensus 264 ~~sK~l~-~G~pigav~~---~~~i~~~~~----~~~~~~T~~~~p~~~aaa~a~L~~~------~~--~~l~~~~~~~g 327 (421)
T PRK06777 264 TMAKSLG-GGMPISAVVG---RAEVMDAPA----PGGLGGTYAGNPLAVAAALAVLDVI------AE--EKLCQRALILG 327 (421)
T ss_pred eeehhhc-CCCceEEEEE---cHHHHhccC----CCCCCCCCCcCHHHHHHHHHHHHHH------Hh--ccHHHHHHHHH
Confidence 7999999 8999999755 677544432 2222223345666666666555411 11 24556677777
Q ss_pred HHHHHHhhhccCCCC-CcccccCCcceeee-cCC------CHHHH----HHhhhcCcEEEcCCC------eEEec-CCCc
Q 015283 332 QKLFDSLSAKDKSGK-DWSFILRQIGMFSF-TGL------NKAQS----DNMTNKWHVYMTKDG------RISLA-GLSL 392 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~-~~~~~~~~~~~~~~-~~~------~~~~~----~~ll~~~gi~v~~~g------Ris~~-~~~~ 392 (410)
+++.+.|+ ++.... .+....+.+.++.+ +.. +.++. .++++ .||.+.|++ ||+++ ..++
T Consensus 328 ~~l~~~L~-~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~~~~g~~lr~~ppl~i~~ 405 (421)
T PRK06777 328 AHLVEVLE-KAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALE-EGLLLLSCGVHGNVIRFLYPLTIPD 405 (421)
T ss_pred HHHHHHHH-HHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHh-CCeEEeecCCCCCEEEEeCCCCCCH
Confidence 77777776 542111 12334566666643 221 12222 23344 799998864 88865 3599
Q ss_pred ccHHHHHHHHHHHhh
Q 015283 393 AKCEYLADAIIDSYH 407 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~ 407 (410)
+++++++++|.+++.
T Consensus 406 ~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 406 AQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999874
No 203
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.86 E-value=2e-19 Score=171.13 Aligned_cols=214 Identities=14% Similarity=0.129 Sum_probs=145.7
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCC
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVP 151 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~ 151 (410)
.....++++.+++++.. +++++ ++||++|+..+ +...+.+||+|+++.+.|++... .+...|.+
T Consensus 60 ~p~~~~le~~la~l~g~--------~~~v~--~ssG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 127 (390)
T PRK08133 60 NPTVTMFQERLAALEGA--------EACVA--TASGMAAILAV--VMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIE 127 (390)
T ss_pred ChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcE
Confidence 34567899999998532 34666 79999999987 44457899999999999976544 44567888
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
++.++. .|++.+++.+.+ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 128 v~~vd~-------~d~~~l~~~i~~---~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~--- 191 (390)
T PRK08133 128 TTFVDL-------TDLDAWRAAVRP---NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ--- 191 (390)
T ss_pred EEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 888876 267888888864 6788888999999999764 678888899999999999998654421
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~ 311 (410)
. ++ .. ..++++.|+||.++.+|.++|+. ++.+++.++++...+.. .....+...+.++..-++
T Consensus 192 -~--pl----~~-g~Divv~S~sK~~~g~g~~~GG~--vv~~~~~~~~~~~~~~~----~g~~~~~~~a~~~l~gl~--- 254 (390)
T PRK08133 192 -Q--PL----KL-GADVVIHSATKYLDGQGRVLGGA--VVGSKELMEEVFGFLRT----AGPTLSPFNAWVFLKGLE--- 254 (390)
T ss_pred -C--ch----hh-CCcEEEeecceeecCCcceEeEE--EEcCHHHHHHHHHHHHH----hCCCCCHHHHHHHHcccc---
Confidence 1 11 11 24688999999999899998665 33466655555543331 111233333222222222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
.+....++..++...+.+.|+ +.
T Consensus 255 -------tl~~R~~~~~~~a~~la~~L~-~~ 277 (390)
T PRK08133 255 -------TLSLRMEAHSANALALAEWLE-AH 277 (390)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHH-hC
Confidence 123344455566777777777 55
No 204
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2.4e-19 Score=169.99 Aligned_cols=219 Identities=13% Similarity=0.080 Sum_probs=150.7
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN---- 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~---- 146 (410)
.+| +......|+++++++... +.+++ ++||++++..+ +...+.+||+|++++|+|+.....+.
T Consensus 47 ~R~-~~pt~~~L~~~lA~l~g~--------~~~i~--~~sg~~Ai~~~--l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~ 113 (386)
T PRK08045 47 SRR-GNPTRDVVQRALAELEGG--------AGAVL--TNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAK 113 (386)
T ss_pred eCC-CCccHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHh
Confidence 445 555678999999999532 24666 89999999987 44457899999999999986443333
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.++..++ ..|++.+++.+.+ +++++++++|+||||.+++ +++|.++|+++|+++|+|++|....
T Consensus 114 ~~gi~v~~vd-------~~d~e~l~~~l~~---~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~ 180 (386)
T PRK08045 114 RGCYRVLFVD-------QGDEQALRAALAE---KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPA 180 (386)
T ss_pred hCCeEEEEeC-------CCCHHHHHHhccc---CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccc
Confidence 2233333332 2578899888865 6778888999999999886 4567777999999999999987654
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
.. . ++ .. ...++++|++|.++ .++.+.|++ ++.++++++++..... ......+...+.++..
T Consensus 181 ~~----~--pl----~~-gaDivv~S~tK~l~G~~d~~~G~v--i~~~~~~~~~l~~~~~----~~g~~~~p~~~~l~~r 243 (386)
T PRK08045 181 LQ----N--PL----AL-GADLVLHSCTKYLNGHSDVVAGVV--IAKDPDVVTELAWWAN----NIGVTGGAFDSYLLLR 243 (386)
T ss_pred cC----C--ch----hh-CCCEEEeecceeccCCCCceeEEE--EeCcHHHHHHHHHHHH----hcCCCCCHHHHHHHHh
Confidence 21 1 11 11 23588999999985 556778887 4556776665543222 2333456666666666
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.|+.- ....++..+++..+.+.|+ ..+
T Consensus 244 gl~tl----------~~R~~~~~~na~~la~~L~-~~p 270 (386)
T PRK08045 244 GLRTL----------VPRMELAQRNAQAIVKYLQ-TQP 270 (386)
T ss_pred hhccH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 66642 3555666777777788777 654
No 205
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=2e-19 Score=171.79 Aligned_cols=338 Identities=13% Similarity=0.015 Sum_probs=194.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|.--...|+. +|.+.+++.+++.... + +.+.. ..+....+++.+...... .+.+.+ +++|++
T Consensus 40 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~-~-~~~~~-~~~~~~~la~~L~~~~~~---~~~v~f--~~sGse 109 (408)
T PRK04612 40 REYLDLAAGIAVCGLGHN--DPDLVAALTEQAGKLW-H-TSNVF-YSAPPLKLAEELVTASRF---AEKVFL--CNSGTE 109 (408)
T ss_pred CEEEEcCccHhhccCCCC--CHHHHHHHHHHHHhcc-c-ccccc-CCHHHHHHHHHHHhhCCC---CCEEEE--cCchHH
Confidence 567898877543345655 5888898888775421 1 11111 112233344443322111 268999 999999
Q ss_pred HHHHHHHHHHHhC--C----C-CEEEEcCCCCcchhhh-hhhCCCCcc---ceeeecC--CCcccChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYF--P----G-AKVLISSPTWGNHKNI-FNDARVPWS---EYRYYDP--KTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~--~----g-d~Vl~~~p~y~~~~~~-~~~~g~~~~---~v~~~~~--~~~~~d~~~l~~~i~~~~~~ 180 (410)
|++.+.++.+.+. . + .+|+....+|.+.... +...+.... .-+..+. .-.-.|++.+++.+.. .
T Consensus 110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~ 186 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG---G 186 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC---C
Confidence 9999988887652 2 2 3688888887665322 221121100 0011000 0011377888887753 2
Q ss_pred cEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 181 SFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~--~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
....++..|.+++|.+++ .+.+++|.++|++||+++|+||+|.+++..+ ..+.. ...+.+..+.++||.++
T Consensus 187 ~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~a~----~~~~~~pdi~t~~K~l~ 259 (408)
T PRK04612 187 DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG---TLFAH----WQEQVTPDIVTLAKALG 259 (408)
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---chhhh----hhcCCCCCEEEEcchhc
Confidence 333444567777876665 5579999999999999999999999877532 22211 12234556779999998
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 338 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 338 (410)
+|+|+||++. ++++.+.+. ......+.+.+.+++.++...|+.- ++ ++..++++++.+++.+.|
T Consensus 260 -~G~piga~~~---~~~~~~~~~----~~~~~~t~~~~p~~~aaa~a~L~~~------~~--~~l~~~~~~~g~~l~~~l 323 (408)
T PRK04612 260 -GGFPIGAMLA---GPKVAETMQ----FGAHGTTFGGNPLAAAVARVALRKL------AS--PQIAANVARQSAALRAGL 323 (408)
T ss_pred -CCCceEEEEE---CHHHHhhhc----CCCcCCCCCCCHHHHHHHHHHHHHH------Hh--ccHHHHHHHHHHHHHHHH
Confidence 8999999754 566444433 2222222234555566655444321 00 244556666666666666
Q ss_pred hhccCCCCCc-ccccCCcceeeecCC------CHHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHh
Q 015283 339 SAKDKSGKDW-SFILRQIGMFSFTGL------NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 339 ~~~~g~~~~~-~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l 406 (410)
+ ++....++ ...... |.+.-+.+ ....+.+.+.++|+.+.+.| |+..+ ..+++++++++++|++++
T Consensus 324 ~-~l~~~~~~i~~vrg~-Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~l 401 (408)
T PRK04612 324 E-ALNAEFGVFAQVRGR-GLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLAL 401 (408)
T ss_pred H-HHHhhCCCeeeeecc-ceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHHH
Confidence 5 54311111 123333 33322221 12233333445799998765 77643 258999999999999998
Q ss_pred hhc
Q 015283 407 HNV 409 (410)
Q Consensus 407 ~~~ 409 (410)
.++
T Consensus 402 ~~~ 404 (408)
T PRK04612 402 ADY 404 (408)
T ss_pred HHH
Confidence 653
No 206
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.9e-19 Score=171.57 Aligned_cols=219 Identities=13% Similarity=0.094 Sum_probs=147.3
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hhhhhh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFN 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~----~~~~~~ 146 (410)
.+| +.....++++.++++... ++.++ +++|++++.++ +...+.+||+|+++.|+|+. +...+.
T Consensus 55 ~R~-~~p~~~~Le~~lA~l~g~-------~~~v~---~~sG~~Ai~~~--l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~ 121 (405)
T PRK08776 55 TRS-GNPTRDLLGEALAELEGG-------AGGVI---TATGMGAINLV--LNALLQPGDTLVVPHDAYGGSWRLFNALAK 121 (405)
T ss_pred cCC-CChHHHHHHHHHHHHhCC-------CceEE---EcCHHHHHHHH--HHHHhCCCCEEEEccCCchHHHHHHHHHHH
Confidence 344 334567899999998532 34554 47788999887 34447899999999999987 344455
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.+++.++. .|++.+++.+++ +++++++++|+||||.+ .++++|+++|+++|+++|+|++|....
T Consensus 122 ~~g~~v~~v~~-------~d~~~l~~~i~~---~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 122 KGHFALITADL-------TDPRSLADALAQ---SPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred hcCcEEEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 56767666654 378889888864 67788889999999996 467888888999999999999987532
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
. .. ++ . ...++++.|.+|.++.+ +...|++ +++++++.+++..... ....+++.+.+.++..
T Consensus 189 ~----~~--pl----~-~gaDivv~S~tK~l~g~~~~~~G~v--v~~~~~l~~~l~~~~~----~~g~~~s~~~a~l~~~ 251 (405)
T PRK08776 189 L----QK--PL----E-FGADLVLHSTTKYINGHSDVVGGAV--VARDAELHQQLVWWAN----ALGLTGSPFDAFLTLR 251 (405)
T ss_pred c----CC--cc----c-ccCCEEEecCceeecCCCCceEEEE--EeCCHHHHHHHHHHHH----hcCCCCCHHHHHHHHh
Confidence 1 11 11 1 12358899999999755 4667876 4566776666543222 1122344544444443
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.++. ++...++..++...+.+.|+ +.+
T Consensus 252 gl~t----------l~~r~~~~~~na~~la~~L~-~~p 278 (405)
T PRK08776 252 GLRT----------LDARLRVHQENADAIAALLD-GHA 278 (405)
T ss_pred hhCc----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence 3332 34555666777777777777 654
No 207
>PRK07505 hypothetical protein; Provisional
Probab=99.86 E-value=2.4e-19 Score=172.30 Aligned_cols=319 Identities=10% Similarity=0.053 Sum_probs=178.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccC-----cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEY-----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y-----~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
...+|+..+.++ |. ..+|++.+++.+++.. +..... .......++++.+++++. .+.+.+
T Consensus 46 ~~~ld~~s~~~l---gl-~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~~-- 111 (402)
T PRK07505 46 HTFVNFVSCSYL---GL-DTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFG--------ASVLTF-- 111 (402)
T ss_pred ceEEEeecCCcc---CC-CCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhC--------CCEEEE--
Confidence 467899775442 31 2258888888777643 200111 112334667777777642 133444
Q ss_pred cCChhhHHHHHHHHHHH-h-CCCC-EEEEcCCCC-cchhh--hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCc
Q 015283 108 GLSGTGSLRLAAALIER-Y-FPGA-KVLISSPTW-GNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 181 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~-~-~~gd-~Vl~~~p~y-~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 181 (410)
++|+++...+..+... . .+|+ .|++.+..| +.... .....+.+++.+|. .|++.+++.+.+ .+
T Consensus 112 -~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~---~~ 180 (402)
T PRK07505 112 -TSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT---NK 180 (402)
T ss_pred -CChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc---CC
Confidence 5667788776554432 2 2243 366666544 33211 11123445555554 378999988864 44
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEeccccccccc
Q 015283 182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~ 260 (410)
.++++++|+||||.+.+ +++|.++|+++|+++|+||+|...++++. ...+....+.. ..+++++++|+||.++.+
T Consensus 181 ~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~-g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~ 256 (402)
T PRK07505 181 TVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKN-GEGYVRSELDYRLNERTIIAASLGKAFGAS 256 (402)
T ss_pred CEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCC-CCchHHHHcCCCCCCCeEEEEechhhhhcc
Confidence 56666899999999888 56667779999999999999855443321 11222222222 356789999999999876
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHhhccC-ccc-CCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKRLARP-MYS-NPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
| ||+ ++.++++++.+.. .... +++ +++..+..++...++ +.. +.+.+++++++.+.+.
T Consensus 257 G---g~~--~~~~~~~~~~~~~----~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~--------~~~~~~~l~~~~~~~~ 319 (402)
T PRK07505 257 G---GVI--MLGDAEQIELILR----YAGPLAFSQSLNVAALGAILASAEIHLSEE--------LDQLQQKLQNNIALFD 319 (402)
T ss_pred C---eEE--EeCCHHHHHHHHH----hCCCceeCCCCCHHHHHHHHHHHHHHhccC--------cHHHHHHHHHHHHHHH
Confidence 5 776 3456675555543 2222 222 333344444433332 211 2233444554444333
Q ss_pred HHhhhccCCCCCcccccCCcceeeec--CC---CHHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHH
Q 015283 336 DSLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYL 398 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~~~~~~~--~~---~~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~ 398 (410)
+.+. .. ......++.++ +. ..++.+++++ .||.+.+. + ||+++. .++++++++
T Consensus 320 ~~~~-~~--------~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~ 389 (402)
T PRK07505 320 SLIP-TE--------QSGSFLPIRLIYIGDEDTAIKAAKQLLD-RGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRL 389 (402)
T ss_pred HHHH-hc--------CCCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHH
Confidence 3221 10 01111111121 21 1234566665 69999753 2 888763 489999999
Q ss_pred HHHHHHHhhh
Q 015283 399 ADAIIDSYHN 408 (410)
Q Consensus 399 ~~~l~~~l~~ 408 (410)
++.|++++.+
T Consensus 390 ~~~l~~~l~~ 399 (402)
T PRK07505 390 CSLLKEILDE 399 (402)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 208
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=2.5e-19 Score=172.82 Aligned_cols=340 Identities=14% Similarity=0.090 Sum_probs=195.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.--...|+. +|.+.+++.+++..... ..|.......++.+.+++..... -+.+.+ +++|
T Consensus 41 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~------~~~v~f--~~sG 110 (443)
T PRK08360 41 NEYIDFLSDAAVQNVGHN--NPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGD------NPKVSF--GLSG 110 (443)
T ss_pred CEEEEccccHhhcccCCC--CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCC------CCEEEE--cCCH
Confidence 567898887543355665 58899988888754211 11212222334555555543211 257899 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchh-hhhhhCCC------------CccceeeecCC--Ccc--------cChh
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARV------------PWSEYRYYDPK--TVG--------LDFE 168 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~-~~~~~~g~------------~~~~v~~~~~~--~~~--------~d~~ 168 (410)
++|++.+.++.+.+....+|+....+|.+.. ..+...|. .+..++..+.. .+. .+++
T Consensus 111 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (443)
T PRK08360 111 SDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVE 190 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHH
Confidence 9999999988877765578888777775543 21221121 12222221100 000 1234
Q ss_pred hHHHHHhc--CCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 169 GMIADIKA--APGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 169 ~l~~~i~~--~~~~~~~ii~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
.+++.+.. .+++..++++...+||+|.+++.. .++++.++|++||+++|+||+|.+|+..+ ..+....+ +..+
T Consensus 191 ~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G---~~~a~~~~-~~~p 266 (443)
T PRK08360 191 YIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG---KWFAIEHF-GVEP 266 (443)
T ss_pred HHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---cchhhhhc-CCCC
Confidence 45566643 124567777666689999988755 59999999999999999999999887432 22222222 2233
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
+++ ++||.++ +|+|+||+++ ++++.+.+. ......+...+.+++.++...|+.- .+ +...+
T Consensus 267 Dii---tlsK~l~-~G~pigav~~---~~~i~~~~~----~~~~~~T~~~~p~~~aaa~a~l~~l------~~--~~l~~ 327 (443)
T PRK08360 267 DII---TLGKPLG-GGLPISATIG---RAEIMDSLP----PLAHAFTLSGNPVASAAALAVIEEI------EE--KNLLK 327 (443)
T ss_pred CEE---Eeccccc-CCceeEEEEE---cHHHHhhhc----CCCCCCCCCcCHHHHHHHHHHHHHH------HH--cCHHH
Confidence 444 6799999 8999999755 777555542 2212222234444555554444321 00 12334
Q ss_pred HHHHHHHHHHHHhhhccCCCCC-cccccCCcceeeecCC--C-----------HHHHHHhhhcCcEEEcCC-C---eEEe
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFSFTGL--N-----------KAQSDNMTNKWHVYMTKD-G---RISL 387 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~--~-----------~~~~~~ll~~~gi~v~~~-g---Ris~ 387 (410)
+++++.+++.+.|+ ++....+ +...... |.+.-+.+ + ..+..++++ +|+.+.+. + ||+.
T Consensus 328 ~~~~~g~~l~~~L~-~l~~~~~~v~~vrg~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~~~lr~~P 404 (443)
T PRK08360 328 RAEKLGNYTKKRLE-EMKKKHELIGDVRGI-GLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTFFSGNVLRIQP 404 (443)
T ss_pred HHHHHHHHHHHHHH-HHHHhCCCeeeeecc-ceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEeecCCCEEEEeC
Confidence 55555555555554 3311000 1122223 33322111 0 123445554 69998754 2 7854
Q ss_pred cC-CCcccHHHHHHHHHHHhhhc
Q 015283 388 AG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 388 ~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+. .|+++++++++++.+++..+
T Consensus 405 ~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 405 PLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 43 49999999999999998653
No 209
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.85 E-value=2.6e-20 Score=176.16 Aligned_cols=295 Identities=15% Similarity=0.088 Sum_probs=183.1
Q ss_pred ecCCCcccccHHHHHHHHHhhccCC--CccCcCC------cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283 45 RTEELQPYVLDVVKKAENLMLERGE--NKEYLPI------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 116 (410)
Q Consensus 45 ~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~------~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~ 116 (410)
+|..+..++++.+++++.+.+.... ....... .-.+++|+.+++++... +++|++ ++|+|+++.
T Consensus 2 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--~~g~t~a~~ 73 (353)
T TIGR03235 2 LDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGAD------TEEVIF--TSGATESNN 73 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHHH
Confidence 4566666778999999987763211 0111111 12467888888886432 678999 999999998
Q ss_pred HHHHHHHHh--CCC-CEEEEcCCCCcchhhh---hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 117 LAAALIERY--FPG-AKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 117 ~~~~~~~~~--~~g-d~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
.+...+... .+| +.|++....|+.+... ++..|.+++.++. .+++.+|++.+++.+++ ++.++++++++
T Consensus 74 ~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~---~~~lv~~~~~~ 148 (353)
T TIGR03235 74 LAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPV--DESGRIDVDELADAIRP---DTLLVSIMHVN 148 (353)
T ss_pred HHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEcc--CCCCcCCHHHHHHhCCC---CCEEEEEEccc
Confidence 875433222 356 7888888777765443 4457888888887 34567899999998864 67888889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||||.+.+ +++|.++|+++|+++++|+++. ++..+.+. .....++++.|.+|.+|++| +|++++
T Consensus 149 n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~-~g~~~~~~---------~~~~~D~~~~s~~K~~gp~g--~g~l~~- 212 (353)
T TIGR03235 149 NETGSIQP---IREIAEVLEAHEAFFHVDAAQV-VGKITVDL---------SADRIDLISCSGHKIYGPKG--IGALVI- 212 (353)
T ss_pred CCceeccC---HHHHHHHHHHcCCEEEEEchhh-cCCccccc---------cccCCCEEEeehhhcCCCCc--eEEEEE-
Confidence 99999776 5777788999999999999954 33211111 12235677789999988766 588754
Q ss_pred eCCchhHHH--HHHHHH--hhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 271 CSSSDLAAR--VKSQLK--RLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 271 ~~~~~~~~~--~~~~~~--~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
+++.... +..... ...+.... +++.....++...++ + +.+..++.+++++++++++.+.|+ +.|+
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~---~---~~~~~~~~~~~~~~l~~~l~~~l~-~~g~- 282 (353)
T TIGR03235 213 --RKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAE---I---ARRNAQAWEVKLRAMRNQLRDALQ-TLGV- 282 (353)
T ss_pred --ccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHH---H---HHhhHHHHHHHHHHHHHHHHHHhc-cCCe-
Confidence 4432111 110000 00001111 222222222222222 1 123456778899999999999998 7763
Q ss_pred CCcccccC----Cccee--eecCCCHHHHHHhhhcCcEEEcCC
Q 015283 346 KDWSFILR----QIGMF--SFTGLNKAQSDNMTNKWHVYMTKD 382 (410)
Q Consensus 346 ~~~~~~~~----~~~~~--~~~~~~~~~~~~ll~~~gi~v~~~ 382 (410)
++..+ ..+.. ...+.+.+.+.+.|++ +|.+.+|
T Consensus 283 ---~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 283 ---KLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred ---EEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEEch
Confidence 33321 11222 2235566666666665 8999876
No 210
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.85 E-value=4.2e-19 Score=168.89 Aligned_cols=218 Identities=14% Similarity=0.088 Sum_probs=145.8
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~ 150 (410)
+.....+|++.++++.... ..++ +++|+.++..+ +...+.+||+|+++.|.|+... ..+...|.
T Consensus 57 ~~p~~~~le~~lA~l~g~~--------~av~--~~sG~~Ai~~~--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~ 124 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLEGTE--------AAVA--TSSGMGAIAAT--LLTILKAGDHLISDECLYGCTFALLEHALTKFGI 124 (391)
T ss_pred CCchHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCe
Confidence 4456789999999996432 2444 68889988877 4445779999999999887543 34456787
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++.. |++.+++.+.+ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 125 ~~~~vd~~-------d~e~l~~~i~~---~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~-- 189 (391)
T TIGR01328 125 QVDFINMA-------IPEEVKAHIKD---NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT-- 189 (391)
T ss_pred EEEEECCC-------CHHHHHHhhcc---CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC--
Confidence 77777651 68888888865 6788888999999999665 667777799999999999998754422
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
. .+ .. ..++++.|+||.++.+|.++|++ ++.+++++++++....... .....+...+.++...|+..
T Consensus 190 -~---~~----~~-g~Divv~S~sK~lgg~g~~~gG~--v~~~~~li~~l~~~~~~~~--~g~~l~~~~a~l~l~~L~tl 256 (391)
T TIGR01328 190 -N---PV----AL-GVDVVVHSATKYIGGHGDVVAGL--ICGKAELLQQIRMVGIKDM--TGSVISPFDAWLILRGLKTL 256 (391)
T ss_pred -C---ch----hc-CCCEEEccccccccCCCCceEEE--EEcCHHHHHHHHHHHHHhC--CCCCCCcHHHHHHHhCcCcH
Confidence 0 11 11 34588899999999889886554 3447787766654322111 11123333333333334322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
....++.+++...+.+.|+ ..+
T Consensus 257 ----------~~r~~~~~~na~~la~~L~-~~p 278 (391)
T TIGR01328 257 ----------NIRMKRHSENAMKVAEYLK-SHP 278 (391)
T ss_pred ----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence 2334555666677777776 553
No 211
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.85 E-value=1e-18 Score=166.14 Aligned_cols=192 Identities=18% Similarity=0.115 Sum_probs=138.1
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEE
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKV 131 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~V 131 (410)
..+.-.+++.+.+..+. .. +.....++++++++++.. +++++ ++|||+|+.++ +... +.+||+|
T Consensus 12 ~~~~e~~~~~~~l~~~~-~~--~g~~~~~le~~la~~~g~--------~~~v~--~~sgt~al~la--l~al~~~~Gd~V 76 (379)
T PRK11658 12 MGDEELAAVKEVLRSGW-IT--TGPKNQALEQAFCQLTGN--------QHAIA--VSSATAGMHIT--LMALGIGPGDEV 76 (379)
T ss_pred CCHHHHHHHHHHHHcCC-cc--CCHhHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEE
Confidence 45666777777775543 22 234578999999999643 24555 79999999987 3444 5699999
Q ss_pred EEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 015283 132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 211 (410)
Q Consensus 132 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~ 211 (410)
++++++|..+...+...|++++.+++. .+++.+|++.+++.+.+ ++++++ |.||+|.. .++++|+++|++
T Consensus 77 iv~~~~~~~~~~~~~~~G~~~v~vd~~-~~~~~~d~~~l~~~i~~---~tkav~---~~~~~G~~---~d~~~i~~~a~~ 146 (379)
T PRK11658 77 ITPSLTWVSTLNMIVLLGATPVMVDVD-RDTLMVTPEAIEAAITP---RTKAII---PVHYAGAP---ADLDAIRAIGER 146 (379)
T ss_pred EECCCcHHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhccc---CCeEEE---EeCCCCCc---CCHHHHHHHHHH
Confidence 999999999998889999999999873 45677899999999875 667666 66889995 456788888999
Q ss_pred cCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH
Q 015283 212 KNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 212 ~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
+|+++|+|++|.... +.+ . .....+ . .+.||++.-.+++.+.|++ ++.++++.++++.
T Consensus 147 ~gi~vi~D~a~a~g~~~~~--~------~~g~~g-~--~~~Sf~~~K~l~~g~GG~v--~~~~~~~~~~~~~ 205 (379)
T PRK11658 147 YGIPVIEDAAHAVGTYYKG--R------HIGARG-T--AIFSFHAIKNITCAEGGLV--VTDDDELADRLRS 205 (379)
T ss_pred cCCeEEEECCCccCCeECC--e------ecCCCC-C--EEEeCCCCCcCcccCceEE--EECCHHHHHHHHH
Confidence 999999999976322 211 0 011122 2 3456655444566677776 5667887777664
No 212
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=6.3e-19 Score=167.66 Aligned_cols=216 Identities=15% Similarity=0.110 Sum_probs=143.1
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~ 150 (410)
+.....+|+++++++.... ..++ +++|++|+.++. ...+.+||+|+++.|+|+.....+ ...|.
T Consensus 59 ~~p~~~~Le~~lA~~~g~~-------~~i~---~~sG~~Ai~~~l--~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGA-------YGRA---FSSGMAATDCLL--RAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CCccHHHHHHHHHHHhCCC-------ceEE---eCCHHHHHHHHH--HHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 5567889999999996443 2344 477899999883 444789999999999998654333 23465
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++. .|++++++.+.+ +++++++++|+||||. ..++++|+++|+++|+++|+|++|......
T Consensus 127 ~~~~~d~-------~d~e~l~~~i~~---~tklV~ie~p~NPtg~---~~dl~~I~~la~~~gi~lIvD~a~a~~~~~-- 191 (388)
T PRK07811 127 EYTPVDL-------SDLDAVRAAITP---RTKLIWVETPTNPLLS---ITDIAALAELAHDAGAKVVVDNTFASPYLQ-- 191 (388)
T ss_pred EEEEeCC-------CCHHHHHHhcCc---CCeEEEEECCCCCcce---ecCHHHHHHHHHHcCCEEEEECCCCccccC--
Confidence 5555543 478999988875 6788888999999998 567888888899999999999998765421
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
. ++ . ...++++.|++|.++.+| .+.||+ +++++++.+++.. ++ .......+...+..+...|+.
T Consensus 192 -~---p~----~-~gaDivv~S~sK~l~g~~~~~gG~v--v~~~~~l~~~~~~-~~---~~~g~~~s~~~a~l~~~~L~t 256 (388)
T PRK07811 192 -Q---PL----A-LGADVVVHSTTKYIGGHSDVVGGAL--VTNDEELDEAFAF-LQ---NGAGAVPGPFDAYLTLRGLKT 256 (388)
T ss_pred -C---ch----h-hCCcEEEecCceeecCCCCcEEEEE--EECCHHHHHHHHH-HH---HhcCCCCCHHHHHHHHhccCc
Confidence 1 11 1 124589999999998654 456887 4555665554432 11 111122333333333444443
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
- ....++..++...+.+.|+ ..+
T Consensus 257 l----------~~R~~~~~~na~~la~~L~-~~p 279 (388)
T PRK07811 257 L----------AVRMDRHSENAEAVAEFLA-GHP 279 (388)
T ss_pred H----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence 2 2334445566677777776 553
No 213
>PLN02651 cysteine desulfurase
Probab=99.85 E-value=1.9e-19 Score=170.78 Aligned_cols=260 Identities=16% Similarity=0.066 Sum_probs=165.7
Q ss_pred eecCCCcccccHHHHHHHHHhhccCCCcc------CcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGENKE------YLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
|+|..+.+++++.+.+++.+.+....... +.. ..-.+++|+.+++++... +++|++ ++|+|+++
T Consensus 2 Yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--t~~~t~a~ 73 (364)
T PLN02651 2 YLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGAD------PKEIIF--TSGATESN 73 (364)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHH
Confidence 46677777788999999887663211010 111 112557778888876432 678999 99999998
Q ss_pred HHHHHHH-HH-hCCCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 116 RLAAALI-ER-YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 116 ~~~~~~~-~~-~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
.+++..+ .. ..+||+|+++...|+.+...+ ...|.+++.++. .+++.+|++.+++.+++ ++.++++++++
T Consensus 74 ~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~i~~---~t~lv~v~~~~ 148 (364)
T PLN02651 74 NLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPV--KSDGLVDLDELAAAIRP---DTALVSVMAVN 148 (364)
T ss_pred HHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEcc--CCCCcCCHHHHHHhcCC---CcEEEEEECCC
Confidence 8764433 22 358999999998887654433 356888888887 34567899999999975 67788889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||||.+.+ +++|.++|+++|+++++|.+++.... +.+. ...+.++++.|..|.+|++| +|++++
T Consensus 149 n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~-~~~~---------~~~~~D~~~~s~hK~~gp~G--~g~l~v- 212 (364)
T PLN02651 149 NEIGVIQP---VEEIGELCREKKVLFHTDAAQAVGKI-PVDV---------DDLGVDLMSISGHKIYGPKG--VGALYV- 212 (364)
T ss_pred CCceeccc---HHHHHHHHHHcCCEEEEEcchhhCCc-ccCc---------ccCCCCEEEechhhhCCCCc--eEEEEE-
Confidence 99999665 66778889999999999999653221 1221 12245788889999765545 688755
Q ss_pred eCCchhHHHHHHHHHh--hccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283 271 CSSSDLAARVKSQLKR--LARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 341 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 341 (410)
+++..+++...... ....... +++..+..++...|+ + +.+..++++++.++.++++.+.|+ +
T Consensus 213 --~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~---~---~~~~~~~i~~~~~~l~~~l~~~l~-~ 277 (364)
T PLN02651 213 --RRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACE---L---AMKEMDYDEKHMKALRERLLNGLR-A 277 (364)
T ss_pred --cCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHH---H---HHHhHHHHHHHHHHHHHHHHHHHH-h
Confidence 44433332221110 0011122 233322222222222 1 122346777888888888888886 5
No 214
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.85 E-value=8.5e-19 Score=166.22 Aligned_cols=216 Identities=18% Similarity=0.106 Sum_probs=149.0
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~ 150 (410)
+.....++++.++++... +..++ +++|++|+..+ +...+.+||+|+++.++|...... +...|.
T Consensus 38 ~~p~~~~le~~la~l~g~--------~~a~~--~~sG~~Ai~~~--l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 38 GNPTVDALEKKLAALEGG--------EAALA--FSSGMAAISTV--LLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CChhHHHHHHHHHHHHCC--------CCEEE--EcCHHHHHHHH--HHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 556678999999998532 23455 68899999988 444477999999999999876543 346677
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++. -|++.+++.+++ +++++++.+|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 106 ~~~~v~~-------~d~~~l~~~i~~---~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~-- 170 (369)
T cd00614 106 EVTFVDP-------DDPEALEAAIKP---ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ-- 170 (369)
T ss_pred EEEEeCC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC--
Confidence 7777665 157888888864 6778888999999999665 667888899999999999998654421
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
. .+ ....++++.|+||.++.+| .+.||++ ++++++++++...... .....+...+.++...|+.
T Consensus 171 --~--~~-----~~g~Divv~S~tK~l~g~~~~~gG~v~--~~~~~l~~~l~~~~~~----~g~~~~p~~a~~~l~~l~t 235 (369)
T cd00614 171 --R--PL-----ELGADIVVHSATKYIGGHSDVIAGVVV--GSGEALIQRLRFLRLA----LGTILSPFDAWLLLRGLKT 235 (369)
T ss_pred --C--hh-----hhCCcEEEeccceeccCCCCceEEEEE--eCcHHHHHHHHHHHHh----hCCCCCHHHHHHHHcCCCC
Confidence 1 11 1135688999999998666 6788873 3333766666544321 1223344444444444432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
. ....++..++...+.+.|+ +.+
T Consensus 236 l----------~~r~~~~~~na~~la~~L~-~~~ 258 (369)
T cd00614 236 L----------PLRMERHSENALKVAEFLE-KHP 258 (369)
T ss_pred H----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 2 2345566777778888887 665
No 215
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.84 E-value=9e-19 Score=165.75 Aligned_cols=197 Identities=16% Similarity=0.103 Sum_probs=137.1
Q ss_pred ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCC
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA 129 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd 129 (410)
|...+..++++.+.+..+..... ..-..++.+.++++ .+ .+++++ ++|||+++.++. ... +.|||
T Consensus 7 p~~~~~e~~a~~~~~~~~~~~~~--g~~~~~~e~~la~~----~g----~~~~v~--~~sgt~aL~~~l--~al~~~pGd 72 (376)
T TIGR02379 7 PPVTGQELEYIAEAISEGKLSGD--GPFSRRCETWLENR----TG----TKKALL--TPSCTAALEMAA--LLLDIQPGD 72 (376)
T ss_pred CCCCHHHHHHHHHHHHcCCccCC--cHHHHHHHHHHHHH----hC----CCeEEE--eCCHHHHHHHHH--HHcCCCCcC
Confidence 33456778888887765431111 11134445555554 22 467888 999999999873 333 57999
Q ss_pred EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 209 (410)
Q Consensus 130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~ 209 (410)
+|++++++|..+...+...|++++.+++. .+++.+|++.+++.+++ ++++++ |+||||... ++++|.++|
T Consensus 73 ~Viv~~~t~~~~~~~~~~~G~~~v~vd~d-~~~~~~d~~~le~~i~~---~tk~Ii---p~~~~G~~~---d~~~I~~la 142 (376)
T TIGR02379 73 EVIMPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIESAITH---RTKAIV---PVHYAGVAC---DMDTIMALA 142 (376)
T ss_pred EEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcCc---CceEEE---EeCCCCCcc---CHHHHHHHH
Confidence 99999999999999999999999999984 45578999999998875 677776 678999955 566888889
Q ss_pred HHcCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHHHH
Q 015283 210 QEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKSQL 284 (410)
Q Consensus 210 ~~~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~ 284 (410)
++||++||+|++|+... +.+ . .....+ .+.+.|| +|.+. +|.+.|++ ++.+++++++++...
T Consensus 143 ~~~~i~vIeDaa~~~g~~~~~---~-----~~g~~~--~~~~fSf~~~K~l~-~g~~gG~v--~~~~~~~~~~~~~~~ 207 (376)
T TIGR02379 143 NKHQLFVIEDAAQGVMSTYKG---R-----ALGSIG--HLGTFSFHETKNYT-SGGEGGAL--LINDQAFIERAEIIR 207 (376)
T ss_pred HHCCCEEEEECccccCCccCC---c-----ccCCCC--CEEEEeCCCCCcCc-ccCCceEE--EECCHHHHHHHHHHH
Confidence 99999999999977654 221 1 111111 2233333 37775 67778987 667788887776543
No 216
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.84 E-value=4.8e-19 Score=168.60 Aligned_cols=315 Identities=17% Similarity=0.148 Sum_probs=203.8
Q ss_pred eecCCCcccccHHHHHHHHHhhccCCC----ccCcC----CcccHHHHHHHHHHhcCCCCCcccC-CceEEEecCChhhH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGEN----KEYLP----IEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGS 114 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~----~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~ggt~a 114 (410)
|+|..+..++|+.+.+++.+....... ..+.. ..-..+.|+.+++++... + ++|++ ++|+|.+
T Consensus 2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~------~~~~v~~--~~~~t~a 73 (371)
T PF00266_consen 2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAP------PDEEVVF--TSNGTEA 73 (371)
T ss_dssp EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSS------TTEEEEE--ESSHHHH
T ss_pred EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCc------ccccccc--ccccchh
Confidence 567778888899999998887632110 11111 223468889999997544 4 68988 9999999
Q ss_pred HHHHHHHHH-HhCCCCEEEEcCCCCcchhh----hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283 115 LRLAAALIE-RYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189 (410)
Q Consensus 115 ~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p 189 (410)
++.++..+. .+.+||+|++..-.|++... ..+..|.++..++.. .+..+|++.+++.+++ ++.+++++..
T Consensus 74 ~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~--~~~~~~~~~~~~~l~~---~~~lv~~~~~ 148 (371)
T PF00266_consen 74 LNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD--PGGSLDLEDLEEALNP---DTRLVSISHV 148 (371)
T ss_dssp HHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG--TTSSCSHHHHHHHHHT---TESEEEEESB
T ss_pred hhhhhhccccccccccccccccccccccccccccccccchhhhcccccc--ccchhhhhhhhhhhcc---ccceEEeecc
Confidence 998744332 26799999999999887663 334678899888873 4557899999999975 7778888889
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
+|.||...+ +++|.++|+++|+++++|.+++ ++..+.+ ....+.+++++|..|.+|++| +|++++
T Consensus 149 ~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~-~g~~~id---------~~~~~~D~~~~s~~Kl~gp~G--~g~l~v 213 (371)
T PF00266_consen 149 ENSTGVRNP---IEEIAKLAHEYGALLVVDAAQS-AGCVPID---------LDELGADFLVFSSHKLGGPPG--LGFLYV 213 (371)
T ss_dssp ETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTT-TTTSS-----------TTTTTESEEEEESTSTTSSST--EEEEEE
T ss_pred cccccEEee---eceehhhhhccCCceeEechhc-ccccccc---------ccccccceeeecccccCCCCc--hhhhee
Confidence 999999555 6677788999999999999954 4432122 123346788899999666666 588876
Q ss_pred EeCCchhHHHHHHHHH-----------hh-----ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283 270 VCSSSDLAARVKSQLK-----------RL-----ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 332 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~-----------~~-----~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (410)
+++..+++..... .. ...... +++.....++...++.- -...+++++++..++.+
T Consensus 214 ---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~-----~~~g~~~i~~~~~~l~~ 285 (371)
T PF00266_consen 214 ---RPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLL-----EEIGIERIRERIRELAE 285 (371)
T ss_dssp ---EHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
T ss_pred ---hhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhh-----hccccccchhhhhhHHH
Confidence 7776666631110 00 000111 23333322222222211 12345788888999999
Q ss_pred HHHHHhhhccCCCCCccccc-----CCccee--eecCCCHHHHHHhhhcCcEEEcCC--------------C--eEEecC
Q 015283 333 KLFDSLSAKDKSGKDWSFIL-----RQIGMF--SFTGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG 389 (410)
Q Consensus 333 ~l~~~l~~~~g~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~~--------------g--Ris~~~ 389 (410)
++.+.|. +++. +.+.. ...+.. .+.+.+.+.+.+.+++.||.+..| | |+|+..
T Consensus 286 ~~~~~l~-~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~ 361 (371)
T PF00266_consen 286 YLREALE-ELPG---IEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHY 361 (371)
T ss_dssp HHHHHHH-HTTT---EEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GT
T ss_pred HHHhhhh-cCCc---eeEeeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccC
Confidence 9999998 7763 23322 223333 334667766665556569998873 2 999775
Q ss_pred C-CcccHHHH
Q 015283 390 L-SLAKCEYL 398 (410)
Q Consensus 390 ~-~~~~i~~~ 398 (410)
. |++|++++
T Consensus 362 ~nt~~dv~~l 371 (371)
T PF00266_consen 362 YNTEEDVDRL 371 (371)
T ss_dssp TSSHHHHHHH
T ss_pred CCCHHHHhhC
Confidence 3 88898875
No 217
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.83 E-value=1.1e-18 Score=166.61 Aligned_cols=217 Identities=17% Similarity=0.102 Sum_probs=143.3
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~ 150 (410)
+.....++++.++++.... ..++ +++|+.++.++. ...+.+||+|+++.|.|.... ..+...|+
T Consensus 63 ~~p~~~~le~~lA~l~g~~-------~~i~---~~sG~~Al~~~l--~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~ 130 (403)
T PRK07503 63 SNPTLALLEQRMASLEGGE-------AAVA---LASGMGAITATL--WTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGV 130 (403)
T ss_pred CCchHHHHHHHHHHHhCCC-------cEEE---EcCHHHHHHHHH--HHHcCCCCEEEEccCccchHHHHHHHHHhhCCE
Confidence 4456789999999986432 2343 578999988873 344789999999999997533 34456788
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
+++.++. .|++.+++.+++ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 131 ~v~~vd~-------~d~~~l~~~i~~---~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~-- 195 (403)
T PRK07503 131 TVRHVDL-------TDPAALKAAISD---KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ-- 195 (403)
T ss_pred EEEEeCC-------CCHHHHHHhcCc---cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 8877765 268889888865 6777888999999999654 677788899999999999998754321
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
. ++ . ...+++++|+||.++.+| .+.|+++ .+++++++++.... ........+...+..+...|+.
T Consensus 196 --~--~l----~-~g~Di~v~S~tK~l~g~gd~~gG~v~---~~~~l~~~l~~~~~--~~~~g~~~s~~~a~l~l~~L~t 261 (403)
T PRK07503 196 --R--PL----E-LGADLVVHSATKYLGGHGDITAGLVV---GGKALADRIRLEGL--KDMTGAVMSPFDAFLLMRGLKT 261 (403)
T ss_pred --C--ch----h-hCCCEEEccccccccCCCceeEEEEE---cCHHHHHHHHhhhH--HhCcCCCCCHHHHHHHHcCcch
Confidence 1 11 1 134588999999999766 6677763 47776666543211 1111223444444434444332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
- ....++..++...+.+.|+ +.+
T Consensus 262 l----------~~r~~~~~~na~~~a~~L~-~~p 284 (403)
T PRK07503 262 L----------ALRMDRHCASAQAVAEWLA-RHP 284 (403)
T ss_pred H----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence 2 2222333455666666666 543
No 218
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.83 E-value=1.2e-18 Score=163.44 Aligned_cols=341 Identities=14% Similarity=0.105 Sum_probs=211.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...|||..|..-.+.|+. +|.|.+++.+++.. . ....|...+...++.|.+.+.+... ..+.+.+ +++|
T Consensus 56 ~~ylDf~sgi~v~~~GH~--hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-----~~~~~~f--~~sG 126 (447)
T COG0160 56 NEYLDFLSGIAVLNLGHN--HPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-----GLKKVFF--GNSG 126 (447)
T ss_pred CEEEEcccCcchhccCCC--CHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcc-----cCCeEEe--cCCc
Confidence 467899987554466665 69999999887744 2 2244444345556777777765442 1467888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhC-------------CCCccceeeecC--CCccc--------Ch
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDA-------------RVPWSEYRYYDP--KTVGL--------DF 167 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~-------------g~~~~~v~~~~~--~~~~~--------d~ 167 (410)
++|++++.++.+.......|+...-.|.+... .+... ...+..+|..+. ..+.. ..
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~ 206 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL 206 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence 99999999999888877889888877754422 11111 112444444221 11111 22
Q ss_pred hhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283 168 EGMIADIKA---APGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243 (410)
Q Consensus 168 ~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 243 (410)
+.+++.+.. .+.....+++-..+...|.+.++++ ++++.++|++||+++|+||++.+++-. .+.|.+..+. -
T Consensus 207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRT---G~~fa~E~~g-v 282 (447)
T COG0160 207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRT---GKMFAFEHFG-V 282 (447)
T ss_pred HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc---ccchhhhhcC-C
Confidence 334443322 2445677777778988998776666 999999999999999999999999843 4667665542 2
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
.++++ ++||.+| .|+.+|.++. .++ +..........++ ..+.++..++...|+.-+ . +..
T Consensus 283 ~PDiv---t~aK~ig-~G~Pl~avv~---r~e----i~~~~~g~~~~Tf-~GNpva~Aaa~AvL~vie-----~---e~L 342 (447)
T COG0160 283 EPDIV---TLAKSLG-GGLPLSAVVG---RAE----IMDWPPGGHGGTF-GGNPVACAAALAVLDVIE-----E---ENL 342 (447)
T ss_pred CCCEE---Eeccccc-CCCceeEEec---cHH----hcccCCcccCCCC-CcCHHHHHHHHHHHHHHH-----H---ccH
Confidence 34555 6899999 4999999754 666 4333333333333 344444444443433110 0 144
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCCC------e
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKDG------R 384 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~g------R 384 (410)
.++.++.-+++.+.|. ++.-+.+..-..+..|.++-+.+ + ...+.++++ .|+.+..+| |
T Consensus 343 ~~~a~~~G~~l~~~L~-~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~-~Glil~~~G~~~nviR 420 (447)
T COG0160 343 LERAAELGEYLRDRLE-ELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFE-RGLLLLTCGPHGNVLR 420 (447)
T ss_pred HHHHHHHHHHHHHHHH-HHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHH-cCCEEeccCCCCcEEE
Confidence 4555666666666665 44321111111233455543322 1 223556665 599888776 8
Q ss_pred EEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 385 ISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 385 is~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
|..+- +++++++.+++.|.+++.+.
T Consensus 421 i~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 421 ILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 87543 59999999999999998764
No 219
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=9.5e-19 Score=169.35 Aligned_cols=341 Identities=11% Similarity=0.032 Sum_probs=195.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc--CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|..-...|+. +|.+.+++.++++...... ........++.+.++++.... .+.+.+ +++|
T Consensus 43 ~~ylD~~~g~~~~~lGh~--~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~------~~~v~f--~~SG 112 (433)
T PRK08117 43 KEYLDFTSGIAVANVGHR--HPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGG------LDCFFF--SNSG 112 (433)
T ss_pred CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCcH
Confidence 467898887543345554 5889988888775421111 112334456777777664221 357888 8999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCC--C-----------CccceeeecCC--Ccc--------cCh
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR--V-----------PWSEYRYYDPK--TVG--------LDF 167 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g--~-----------~~~~v~~~~~~--~~~--------~d~ 167 (410)
++|++.+.++.+.+....+|+..+-+|.+.... +...+ . .+..+|..+.. ... .++
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (433)
T PRK08117 113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL 192 (433)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence 999999988776665557888888777654322 11111 0 11222221100 000 145
Q ss_pred hhHHHHHhc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 168 EGMIADIKA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 168 ~~l~~~i~~--~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
+.+++.+.+ .++...++++...+.-.|.+. +.+.++++.++|++||+++|+||+|.+|+..+ ..+....+ +..
T Consensus 193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G---~~~~~~~~-gv~ 268 (433)
T PRK08117 193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTG---EWFAAQTF-GVV 268 (433)
T ss_pred HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccc---cchhHhhc-CCC
Confidence 666766653 234566666666666677765 66669999999999999999999999876432 22221111 111
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 324 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 324 (410)
++ +.++||.++ +|+++|++++ ++++.+.+. ......+.+.+.+++.++...|+.-+ + +...
T Consensus 269 pD---i~t~sK~lg-~G~pigav~~---~~~i~~~~~----~~~~~~T~~~np~~~aaa~a~L~~l~------~--~~l~ 329 (433)
T PRK08117 269 PD---IMTIAKGIA-SGLPLSAVVA---SKELMEQWP----LGSHGTTFGGNPVACAAALATLEVIK------E--EKLL 329 (433)
T ss_pred CC---Eeehhhhcc-CCCcceeEEE---cHHHHhhcc----CCCCCCCCCcCHHHHHHHHHHHHHHH------h--ccHH
Confidence 22 359999999 8999999754 777554442 21222222345555555544443110 0 1233
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C----HHHHHHhhhcCcEEEcCCC------eEEe
Q 015283 325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N----KAQSDNMTNKWHVYMTKDG------RISL 387 (410)
Q Consensus 325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~ll~~~gi~v~~~g------Ris~ 387 (410)
++++++.+++.+.|+ ++....++....+..|.+..+.+ + ..+...++ +.||.+.+.| ||++
T Consensus 330 ~~~~~~g~~l~~~L~-~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~~~~~lRl~p 407 (433)
T PRK08117 330 DNANEMGAYALERLE-VLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCL-EKGLLFYLCGNAGNVLRMIP 407 (433)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHH-HCCCEEeecCCCCCEEEEeC
Confidence 444555555555554 43211111112233344433222 1 12244454 4699886532 8875
Q ss_pred c-CCCcccHHHHHHHHHHHhhhc
Q 015283 388 A-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 388 ~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ ..|++++++++++|.+++.++
T Consensus 408 ~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 408 PLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CccCCHHHHHHHHHHHHHHHHHH
Confidence 3 359999999999999998754
No 220
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=2.1e-18 Score=163.65 Aligned_cols=216 Identities=16% Similarity=0.105 Sum_probs=143.0
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh---hCCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN---DARVP 151 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~---~~g~~ 151 (410)
......++++.+++++.. +++++ +++|+.|+..+ +...+.+||+|+++.|+|..+...++ ..|.+
T Consensus 51 ~np~~~~lE~~lA~l~g~--------~~~l~--~~sG~~Ai~~~--l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~ 118 (385)
T PRK08574 51 ENPTLRPLEEALAKLEGG--------VDALA--FNSGMAAISTL--FFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVK 118 (385)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcE
Confidence 455688999999999632 34555 78999999887 44557899999999999998877664 34554
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
+..+. +|++.+++.+.+ .+++++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 119 v~~~~--------~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~--- 182 (385)
T PRK08574 119 VVLAY--------PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY--- 182 (385)
T ss_pred EEEEC--------CCHHHHHHhcCc--cCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 44332 367888888864 25677778999999999776 557788899999999999998533211
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
. ++ ..+.++++.|++|.++.+|-.+ |++ +++++++.++++.... ......+......+...|+.-
T Consensus 183 -~--~l-----~~GaDivv~S~sK~l~g~~d~~gG~v--i~~~~~~~~~~~~~~~----~~g~~~~p~~a~l~l~~l~tL 248 (385)
T PRK08574 183 -R--PL-----RHGADFVVHSLTKYIAGHNDVVGGVA--VAWSGEFLEELWEWRR----RLGTIMQPFEAYLVLRGLKTL 248 (385)
T ss_pred -C--hh-----hhCCcEEEeeCceeecCCCCceeEEE--EECcHHHHHHHHHHHH----hcCCCCCHHHHHHHHcccCcH
Confidence 1 11 1235789999999997677665 544 5667776666554322 111223333333333333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
....++..++...+.+.|+ ..+
T Consensus 249 ----------~~R~~~~~~na~~la~~L~-~~p 270 (385)
T PRK08574 249 ----------EVRFERQCRNAMAIAEFLS-EHP 270 (385)
T ss_pred ----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 2333344446666666666 554
No 221
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=3e-18 Score=163.10 Aligned_cols=173 Identities=15% Similarity=0.101 Sum_probs=129.2
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFN 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~ 146 (410)
.+| +.....+|++.++++.. .+++++ ++||++|+.+++ ...+.+||+|+++.|+|+.+.. .+.
T Consensus 60 ~r~-~~pt~~~Le~~lA~l~g--------~~~~l~--~~sgt~Ai~~~l--~al~~~GD~Vl~~~~~y~~~~~~~~~~~~ 126 (394)
T PRK07050 60 GLH-ATPTSLALAQRLAEIEG--------GRHALL--QPSGLAAISLVY--FGLVKAGDDVLIPDNAYGPNRDHGEWLAR 126 (394)
T ss_pred CCC-CCHHHHHHHHHHHHHhC--------CCeEEE--eccHHHHHHHHH--HHHhCCCCEEEEecCCcccHHHHHHHHHH
Confidence 344 55567899999998852 256878 899999999984 4447899999999999998764 445
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.++..++.. +.+.+++.+++ +++++++++|+||||. ..++++|+++|+++|+++|+|++|....
T Consensus 127 ~~Gi~v~~vd~~-------~~~~l~~~i~~---~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~ 193 (394)
T PRK07050 127 DFGITVRFYDPL-------IGAGIADLIQP---NTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAGL 193 (394)
T ss_pred hcCeEEEEECCC-------CHHHHHHhcCC---CCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCccccc
Confidence 678887776531 34677777764 6788889999999976 8899999999999999999999986543
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
.- . ++ ..+.++++.|++|.++- .+.+.|++ ++++++++++++.
T Consensus 194 ~~----~--~l-----~~GaDi~v~S~tK~~~g~~~~~gG~v--~~~~~~~~~~~~~ 237 (394)
T PRK07050 194 AF----K--PF-----EHGVDISVQALTKYQSGGSDVLMGAT--ITADAELHAKLKL 237 (394)
T ss_pred cc----C--HH-----HcCCeEEEEECCceecCCCCeeEEEE--EECCHHHHHHHHH
Confidence 21 1 11 11347889999999962 33457876 5667776666554
No 222
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.83 E-value=1.8e-18 Score=164.99 Aligned_cols=218 Identities=10% Similarity=0.054 Sum_probs=145.9
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hhhhhh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFN 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~----~~~~~~ 146 (410)
.+| +.....++++.++++... ++.++ +++|+.++..+ +...+.+||+|+++...|++ +...+.
T Consensus 65 ~r~-~~p~~~~le~~lA~l~g~--------~~al~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~ 131 (403)
T PRK07810 65 SRY-GNPTVSMFEERLRLIEGA--------EACFA--TASGMSAVFTA--LGALLGAGDRLVAARSLFGSCFVVCNEILP 131 (403)
T ss_pred eCC-CCchHHHHHHHHHHHhCC--------CcEEE--ECChHHHHHHH--HHHHhCCCCEEEEccCCcchHHHHHHHHHH
Confidence 445 445578999999999532 24445 69999999887 44457899999998865543 445666
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.+++.++. .|++++++.+++ +++++++++|+||||.+. ++++|+++|+++|+++|+|++|....
T Consensus 132 ~~G~~v~~vd~-------~d~~~l~~ai~~---~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~ 198 (403)
T PRK07810 132 RWGVETVFVDG-------EDLSQWEEALSV---PTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPL 198 (403)
T ss_pred HcCcEEEEECC-------CCHHHHHHhcCc---CceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccc
Confidence 78988888864 378899998875 678888899999999966 57778888999999999999987544
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHH-HHHHHHHhhccCcccCCChhHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVA 304 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~ 304 (410)
... ++ ..+.++++.|++|.++..|.++ |++ ++ +++.+. ++..... ......+...+.++.
T Consensus 199 ~~~------~~-----~~gaDivv~S~tK~l~g~g~~~gG~v--~~-~~~~~~~~l~~~~~----~~g~~~s~~~a~l~l 260 (403)
T PRK07810 199 LQR------GL-----PLGADVVVYSGTKHIDGQGRVLGGAI--LG-DREYIDGPVQKLMR----HTGPALSAFNAWVLL 260 (403)
T ss_pred cCC------hh-----hcCCcEEEccCCceecCCcCceeEEE--Ee-ChHHHHHHHHHHHH----HhCCCCCHHHHHHHH
Confidence 321 11 1135788999999998889888 554 23 444333 3332222 222244554444455
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 305 NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
..|+.- ....++..++...+.+.|+ ..+
T Consensus 261 ~~L~tl----------~~R~~~~~~~a~~~a~~L~-~~p 288 (403)
T PRK07810 261 KGLETL----------ALRVRHSNASALRIAEFLE-GHP 288 (403)
T ss_pred hccCcH----------HHHHHHHHHHHHHHHHHHh-cCC
Confidence 554432 2333444445555566666 553
No 223
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.83 E-value=1.7e-18 Score=164.48 Aligned_cols=219 Identities=16% Similarity=0.180 Sum_probs=147.4
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcch----hhhhh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFN 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~----~~~~~ 146 (410)
.+| +.....++++.+++++.. +.+++ +++|+.++..+ +...+.+||+|+++.+.|++. ...++
T Consensus 49 ~r~-~~p~~~~le~~la~l~g~--------~~~~~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~ 115 (380)
T TIGR01325 49 SRY-ANPTVAAFEERIAALEGA--------ERAVA--TATGMSAIQAA--LMTLLQAGDHVVASRSLFGSTVGFISEILP 115 (380)
T ss_pred ecC-CCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCCcchHHHHHHHHHH
Confidence 344 345578999999998532 34556 79999999987 344477999999999988753 33556
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.++..++. .|++.+++.+.+ +++++++++|+||+|.+. ++++|.++|+++|+++|+|++|..+.
T Consensus 116 ~~g~~v~~v~~-------~d~~~l~~~i~~---~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~ 182 (380)
T TIGR01325 116 RFGIEVSFVDP-------TDLNAWEAAVKP---NTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPV 182 (380)
T ss_pred HhCCEEEEECC-------CCHHHHHHhcCC---CceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccc
Confidence 77888877765 267888887764 677888899999999965 56777888999999999999987544
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 306 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 306 (410)
.. . ++ ....++++.|+||.++.+|.++|.+ +..+++.++++...... .....+...+.++...
T Consensus 183 ~~----~--pl-----~~g~Divv~S~sK~l~g~g~~~gG~--vv~~~~~~~~l~~~~~~----~g~~~~p~~a~~~l~~ 245 (380)
T TIGR01325 183 LQ----Q--PL-----KLGADVVVYSATKHIDGQGRVMGGV--IAGSEELMAEVAVYLRH----TGPAMSPFNAWVLLKG 245 (380)
T ss_pred cC----C--ch-----hhCCCEEEeeccceecCCCCeEEEE--EEeCHHHHHHHHHHHHh----hCCCCCHHHHHHHHhc
Confidence 21 1 11 1134688889999998888887444 23466766666554331 1112233322222222
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
++. +....++..+++..+.+.|+ +.+
T Consensus 246 l~t----------l~~r~~~~~~~a~~la~~L~-~~p 271 (380)
T TIGR01325 246 LET----------LSLRMQKQFDSALAIAEWLQ-AQP 271 (380)
T ss_pred cCc----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence 222 23445556667777777777 664
No 224
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=2.9e-18 Score=162.04 Aligned_cols=219 Identities=11% Similarity=0.040 Sum_probs=146.3
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----h
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~ 146 (410)
.+| +......|+++++++.. .+++++ ++||++++.++ +...+.+||+|+++.|+|+.....+ .
T Consensus 48 ~R~-~npt~~~Le~~lA~leg--------~e~ivv--t~gg~~Ai~~~--l~all~~Gd~Il~~~~~y~~~~~~~~~~~~ 114 (388)
T PRK08861 48 TRS-GNPNRGLLEQTLSELES--------GKGAVV--TNCGTSALNLW--VSALLGPDDLIVAPHDCYGGTYRLFNTRAN 114 (388)
T ss_pred cCC-CCchHHHHHHHHHHHhC--------CCeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCchHHHHHHHHHHHh
Confidence 444 45567899999999953 367888 99999999998 4444789999999999998644333 2
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.++..++. .|++.+++.+++ +++++++++|+||||.+++.+ +|.++|+++|+++|+|++|....
T Consensus 115 ~~gi~v~~vd~-------~d~e~l~~~i~~---~tklV~lesP~NPtG~v~dl~---~I~~la~~~gi~vIvDea~~~~~ 181 (388)
T PRK08861 115 KGDFKVQFVDQ-------SDAAALDAALAK---KPKLILLETPSNPLVRVVDIA---ELCQKAKAVGALVAVDNTFLTPV 181 (388)
T ss_pred cCCeEEEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCccccc
Confidence 34555555542 478889888865 678888899999999988754 66777999999999999987544
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
.. . ++ ..+.++++.|++|.++-+ +...|++ +++++++.++++. ++ .......+......+.+
T Consensus 182 ~~----~--pl-----~~GaDivv~S~tK~l~G~~d~~gG~i--~~~~~~~~~~~~~-~~---~~~G~~~~p~~a~l~~r 244 (388)
T PRK08861 182 LQ----K--PL-----ELGADFVIHSTTKYINGHSDVIGGVL--ITKTKEHAEELAW-WG---NCIGATGTPFDSYMTLR 244 (388)
T ss_pred cC----C--Cc-----ccCCCEEEeecceeccCCCcceeEEE--EecHHHHHHHHHH-HH---hccCCCCChHHHHHHHh
Confidence 21 1 11 113568999999998643 4567876 3445565555442 22 22222334444444555
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
-|+.-. -..++..++...+.+.|+ ..+
T Consensus 245 gl~Tl~----------lR~~~~~~~a~~~a~~L~-~~p 271 (388)
T PRK08861 245 GIRTLG----------ARMRVHEESAQQILAYLQ-TQS 271 (388)
T ss_pred cCCCHH----------HHHHHHHHHHHHHHHHHH-hCC
Confidence 555432 223444455666666666 554
No 225
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=2.5e-18 Score=165.06 Aligned_cols=338 Identities=11% Similarity=0.050 Sum_probs=193.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-C-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-...|+. +|.+.+++.+++.... . ..+.+.+...++.+.+++...... .+.+.+ +++|
T Consensus 40 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~-----~~~v~f--~~SG 110 (425)
T PRK07495 40 RRYIDFAAGIAVVNTGHR--HPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDF-----AKKTIF--VTTG 110 (425)
T ss_pred CEEEEccccHHhhccCCC--CHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCC-----CCEEEE--CCch
Confidence 467898887543344654 5888898888775421 1 112233344556666666542211 257899 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCC-------------CccceeeecCCCcccC----hhhHHHH
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV-------------PWSEYRYYDPKTVGLD----FEGMIAD 173 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~d----~~~l~~~ 173 (410)
++|++.+.++.+.+....+|+....+|.+....... .|. .+..+|..+.. ...+ ++.+++.
T Consensus 111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~ 189 (425)
T PRK07495 111 AEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKL 189 (425)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHH
Confidence 999999988887776557888888888665322111 110 12223321111 1122 4445666
Q ss_pred Hhc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 174 IKA--APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 174 i~~--~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
+.. .+++..++++...+.-+|. .+|.+.+++|.++|++||+++|+||+|.+|+.. ...+... ..+.+..+
T Consensus 190 ~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~---G~~~a~~----~~gv~pDi 262 (425)
T PRK07495 190 FKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFART---GKLFAME----HHEVAADL 262 (425)
T ss_pred HHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcC---CCceeec----ccCCCCCE
Confidence 642 1234455554433333784 568888999999999999999999999987643 2222211 12233346
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
.++||.++ +|+++|++++ ++++.+.+. ......+...+.+++.++ ...+.+++ ..+++
T Consensus 263 ~tlsK~l~-~G~pigav~~---~~~i~~~~~----~~~~~~T~~~~pl~~aaa~a~l~~l~~~~-----------l~~~~ 323 (425)
T PRK07495 263 TTMAKGLA-GGFPLAAVTG---RAEIMDAPG----PGGLGGTYGGNPLGIAAAHAVLDVIEEED-----------LCERA 323 (425)
T ss_pred Eeehhhhc-CCccceEEEE---cHHHHhccC----CCCcCCCCCCCHHHHHHHHHHHHHHHhch-----------HHHHH
Confidence 78999998 7999999755 777544432 211222223444444533 34443332 22333
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC--------HH----HHHHhhhcCcEEEcCC---C---eEEec-
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--------KA----QSDNMTNKWHVYMTKD---G---RISLA- 388 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~ll~~~gi~v~~~---g---Ris~~- 388 (410)
++..+++.+.|+ ++-...+........|.+.|+.+. .+ +...++ ++|+.+.+. + ||..+
T Consensus 324 ~~~g~~l~~~L~-~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g~~~~~~r~~Ppl 401 (425)
T PRK07495 324 NQLGNRLKQRLA-SLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCGVHGNVIRFLAPI 401 (425)
T ss_pred HHHHHHHHHHHH-HHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecCCCCCEEEEeCCC
Confidence 344444444443 221000011112234777776441 11 233444 469998653 2 77644
Q ss_pred CCCcccHHHHHHHHHHHhhhc
Q 015283 389 GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 389 ~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.++++++++++++|.++++++
T Consensus 402 ~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 402 TIQDDVFAEALDILEASILEA 422 (425)
T ss_pred ccCHHHHHHHHHHHHHHHHHH
Confidence 259999999999999999765
No 226
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.82 E-value=2.2e-18 Score=168.21 Aligned_cols=319 Identities=12% Similarity=0.043 Sum_probs=194.9
Q ss_pred cHHHHHHHHHhh-ccCCCccCc---CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH--HhCC
Q 015283 54 LDVVKKAENLML-ERGENKEYL---PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE--RYFP 127 (410)
Q Consensus 54 ~~~v~~a~~~~~-~~~~~~~y~---~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~--~~~~ 127 (410)
+|.+.+++.+.. ... .+.|. ...|..++++++.+++.+.+|.+ +..+..++|+++.+..+. +.+ ...+
T Consensus 83 ~p~i~~~~~~~~~~~~-~tpYq~e~~sqG~lel~~~~~~~la~l~G~~----~~~l~~~~GA~a~~~~l~-~~r~~~~~~ 156 (481)
T PRK04366 83 NPKINEKVARLPGFAE-LHPLQPEETVQGALELMYELQEWLKEITGMD----AVTLQPAAGAHGELTGLL-MIRAYHEAR 156 (481)
T ss_pred CHHHHHHHHhCcchhc-CCCCCChhhhhHHHHHHHHHHHHHHHHhCCC----ceEEEeCcHHHHHHHHHH-HHHHHhhcc
Confidence 677777776652 223 36773 45688899999999988777752 334422334344433321 222 2457
Q ss_pred CC----EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283 128 GA----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 203 (410)
Q Consensus 128 gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~ 203 (410)
|| +|++++|+|+.+...++..|.+++.+++ +.++.+|++.+++.+.+ +++++++++|+ |||.+ ..+++
T Consensus 157 Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~--~~~~~~D~e~L~~~i~~---~t~~V~v~~Pn-~tG~~--~~dl~ 228 (481)
T PRK04366 157 GDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS--NEDGLVDLEALKAAVGE---DTAALMLTNPN-TLGLF--ERNIL 228 (481)
T ss_pred CcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec--CCCCCcCHHHHHhhccc---CCeEEEEeCCC-Ccccc--chHHH
Confidence 76 9999999999999999999999999988 34578999999998875 67777778888 99963 35799
Q ss_pred HHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc----CCCcceEEEEeCCchhHHH
Q 015283 204 KIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY----AERIGAMNVVCSSSDLAAR 279 (410)
Q Consensus 204 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~l~~~~~~~~~~~~ 279 (410)
+|+++|+++|+++++|.++..-..+..+ ....+.+++++|.+|.++.| |-.+|++.+ .++..++
T Consensus 229 eI~~~a~~~gal~iVD~a~~~~~~g~~~---------~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~---~~~~~~~ 296 (481)
T PRK04366 229 EIAEIVHEAGGLLYYDGANLNAILGKAR---------PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGV---KEELAPF 296 (481)
T ss_pred HHHHHHHHcCCEEEEEecChhhhcccCC---------ccccCCCEEEEechhhcCCCCCCCCCCeeeeee---hhhhHhh
Confidence 9999999999999999996321111010 11234678899999988643 445677644 4554433
Q ss_pred HHHHH---H--h---------hccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 280 VKSQL---K--R---------LARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 280 ~~~~~---~--~---------~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
+...+ . . ..+.... ........++...+... -.+.++++.++..++.+++.+.|. ++ .
T Consensus 297 lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~-----G~~Gl~~~a~~~~~~a~~l~~~L~-~~-~ 369 (481)
T PRK04366 297 LPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSL-----GAEGLREVSEDAVLNANYLKARLK-DI-Y 369 (481)
T ss_pred CCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhH-hh-C
Confidence 31100 0 0 0000000 11112222222222211 133456777777888999999998 65 1
Q ss_pred CCCcccccCCcceeee--c-----CCCHH-HHHHhhhcCcEEEc----C---CC--eEEecC-CCcccHHHHHHHHHHHh
Q 015283 345 GKDWSFILRQIGMFSF--T-----GLNKA-QSDNMTNKWHVYMT----K---DG--RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 345 ~~~~~~~~~~~~~~~~--~-----~~~~~-~~~~ll~~~gi~v~----~---~g--Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
. +.+..+....+++ . +.+.. ..++|.+ +||.+. | .+ |+++.- .|+++|+++++.|+++.
T Consensus 370 ~--~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~-~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~ 446 (481)
T PRK04366 370 D--LPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLD-YGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIA 446 (481)
T ss_pred c--ccCCCCeeEEEEEECccccccCCCHHHHHHHHHH-CCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHH
Confidence 1 1211111111222 1 22444 4555554 698864 1 23 777653 38899999999999887
Q ss_pred hh
Q 015283 407 HN 408 (410)
Q Consensus 407 ~~ 408 (410)
++
T Consensus 447 ~~ 448 (481)
T PRK04366 447 EE 448 (481)
T ss_pred HH
Confidence 64
No 227
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=9e-18 Score=158.55 Aligned_cols=219 Identities=12% Similarity=0.068 Sum_probs=148.2
Q ss_pred ccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh---
Q 015283 71 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--- 145 (410)
Q Consensus 71 ~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~--- 145 (410)
..|.. ..+...|+++++++... +++++ ++||++|+..+ +.+.+.+||+|++++|.|+++...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~~--------~~~~~--~~sG~~Ai~~~--l~all~~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEGG--------AGTAL--YPSGAAAISNA--LLSFLKAGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence 34654 34557999999998522 35666 89999999988 4555889999999999998887544
Q ss_pred -hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC
Q 015283 146 -NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 224 (410)
Q Consensus 146 -~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 224 (410)
...|.++..++. .+.+.+++.+.+ +++++++++|+||||. ..++++|+++|+++|+++|+|++|..
T Consensus 121 l~~~Gi~v~~v~~-------~~~e~l~~~l~~---~TklV~lespsNPtg~---v~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDP-------MIGEGIRELIRP---NTKVLFLESPGSITME---VQDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECC-------CCHHHHHHhcCc---CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCccc
Confidence 356666655542 144677777764 7888889999999988 68899999999999999999999875
Q ss_pred CCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH
Q 015283 225 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV 303 (410)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 303 (410)
... . . ++ ..+.++++.|.+|.++-+ ....|++ +.+++..+++..... ......+......+
T Consensus 188 p~~--~--~--Pl-----~~GaDivv~S~tK~l~Gh~d~~~G~~---~~~~~~~~~l~~~~~----~~G~~~~p~~a~l~ 249 (394)
T PRK09028 188 PIN--S--R--PF-----EMGVDISIQAATKYIVGHSDVMLGTA---TANEKHWDQLREHSY----LMGQCTSPDDVYLA 249 (394)
T ss_pred ccc--C--C--cc-----ccCceEEEEeCCeEecCCCCEEEEEE---ECCHHHHHHHHHHHH----hcCCCCCHHHHHHH
Confidence 331 1 1 11 224689999999999434 4545653 346665555443222 12223444444444
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 304 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.+-|+.- .-..++..++...+.+.|+ +.+
T Consensus 250 ~rgl~TL----------~lR~~~~~~na~~la~~L~-~~p 278 (394)
T PRK09028 250 MRGLRTL----------GVRLAQHEKNALKVANWLA-TRP 278 (394)
T ss_pred HcccCcH----------HHHHHHHHHHHHHHHHHHh-cCC
Confidence 4444443 3444555667777777787 664
No 228
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=7.1e-18 Score=158.69 Aligned_cols=280 Identities=16% Similarity=0.134 Sum_probs=177.8
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV 150 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~ 150 (410)
.+| +.....+|+++++++.. .+++++ ++||++|+.++. ..+.+||+|+++.+.|+.....+.....
T Consensus 49 ~R~-~~p~~~~le~~lA~leg--------~~~~v~--~~sG~aAi~~~l---~~l~~GD~VI~~~~~yg~~~~~~~~~~~ 114 (364)
T PRK07269 49 TRT-KNPTRAKLEETLAAIES--------ADYALA--TSSGMSAIVLAF---SVFPVGSKVVAVRDLYGGSFRWFNQQEK 114 (364)
T ss_pred eCC-CCccHHHHHHHHHHHhC--------CCeEEE--eCCHHHHHHHHH---HHhCCCCEEEEecCCcCchHHHHHHHHh
Confidence 444 45678899999999962 356777 899999999873 3468999999999998765544332111
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
+. .+.. .+..|++.+++.+.+ +++++++++|+||||.+. ++++|+++|+++|+++|+|++|......
T Consensus 115 ~~-~~~~----~~~~d~~~l~~~i~~---~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~-- 181 (364)
T PRK07269 115 EG-RFHF----TYANTEEELIAAIEE---DTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ-- 181 (364)
T ss_pred cC-cEEE----EecCCHHHHHHhcCc---CceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 10 1111 233588999988875 678888899999999854 7788888899999999999997543221
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCC-cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r-~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
. ++ ....++++.|++|.++-+|-- .|++ ++++++++++++.... . .....+...+..+...|+.
T Consensus 182 --~--pl-----~~gaDivv~S~tK~l~g~~d~~gG~v--~~~~~~l~~~~~~~~~-~---~G~~~s~~~a~l~~~~L~t 246 (364)
T PRK07269 182 --R--PI-----ELGADIVLHSATKYLSGHNDVLAGVV--VTNDLELYEKLFYNLN-T---TGAVLSPFDSYLLMRGLKT 246 (364)
T ss_pred --C--ch-----hhCCcEEEecCceeccCCCcccceEE--EeCcHHHHHHHHHHHH-H---hCCCCCHHHHHHHHcCCCc
Confidence 1 11 113468899999999754432 3564 4556776666653221 1 1123344444444555543
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhh-------------cCc
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTN-------------KWH 376 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-------------~~g 376 (410)
- ....++.+++...+.+.|+ ..+.-. ...+++.+|.+.|.-...+.+.++++ ..+
T Consensus 247 L----------~~r~~~~~~na~~~a~~L~-~~p~v~-~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~s 314 (364)
T PRK07269 247 L----------SLRMERSTANAQEVVAFLK-KSPAVK-EVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVES 314 (364)
T ss_pred H----------HHHHHHHHHHHHHHHHHHH-hCCCcc-EEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCe
Confidence 2 3445555667777777777 654211 13446777877664222222222222 123
Q ss_pred EEEcCC-------------------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 377 VYMTKD-------------------G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 377 i~v~~~-------------------g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
+.+.|. + |+|++- |+.+.+++-|.++++
T Consensus 315 l~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 315 LITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred EeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 333342 1 899854 889999999999875
No 229
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.82 E-value=6.3e-18 Score=163.10 Aligned_cols=344 Identities=12% Similarity=0.072 Sum_probs=194.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc---cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+|+..|..-...|+. +|.+.+++.+++...... .| +.....++.+.+++..... .+.+.+ +++
T Consensus 42 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~------~~~v~f--~~s 110 (423)
T PRK05964 42 RELIDAISSWWVATHGHN--HPYIDQAIREQLDRLDHVIFAGF-THEPAERLAQRLVALTPGG------LDHVFF--SDS 110 (423)
T ss_pred CEEEEcchhHHhccCCCC--CHHHHHHHHHHHhhCCCcccccc-CCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence 467898887543345665 588999988887542111 12 2222335555555553211 357888 999
Q ss_pred hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhhhh-CCC------------CccceeeecCCCcccChhhHH
Q 015283 111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFND-ARV------------PWSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~~~d~~~l~ 171 (410)
|++|++.+.++.+.+. +| .+|+..+.+|.+....... .+. .+..++....+....+++.++
T Consensus 111 GseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~ 190 (423)
T PRK05964 111 GSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALE 190 (423)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHH
Confidence 9999999988887661 23 6888888888665432211 111 112222211110112277788
Q ss_pred HHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 172 ADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 172 ~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+.+.+.++...++++.. .++.+|... +.+.+++|.++|++||+++|+||++.+++.. ...+.... .+..+++
T Consensus 191 ~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---G~~~a~~~-~~v~pDi-- 264 (423)
T PRK05964 191 ALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRT---GTLFACEQ-AGVSPDI-- 264 (423)
T ss_pred HHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---cchhHHHh-cCCCCCe--
Confidence 88865444555555444 477788766 7888999999999999999999999887642 12222211 1122233
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHH--HHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ--LKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
.+++|.++.+++++|+++. ++++.+.+... -.......+.+...++..++...|+-- + -+...+++
T Consensus 265 -~~~~K~l~gG~~p~~av~~---~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l------~--~~~~~~~~ 332 (423)
T PRK05964 265 -MCLSKGLTGGYLPLAATLC---TAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLF------E--DEPVLERV 332 (423)
T ss_pred -eeeehhhhcCcccceEEEE---cHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHH------H--hcCHHHHH
Confidence 3778999744489999654 77865554321 000111111123334434443333210 0 01234555
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---C----H-HHHHHhhhcCcEEEcCCC---eEEecC-CCcccH
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---N----K-AQSDNMTNKWHVYMTKDG---RISLAG-LSLAKC 395 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~----~-~~~~~ll~~~gi~v~~~g---Ris~~~-~~~~~i 395 (410)
+++.+++.+.|+ ++.....+...... |.+..+.+ . . .+...+++ +||.+.+.+ ||+.+. .|++++
T Consensus 333 ~~~g~~l~~~l~-~l~~~~~i~~vrg~-Gl~~~i~l~~~~~~~~~~~l~~~l~~-~Gv~v~~~~~~lR~~p~l~~t~edI 409 (423)
T PRK05964 333 AALSAGLAEGLE-PFRDLPGVADVRVL-GAIGAVELDRPVLERDGPALRAFALE-RGVLLRPLGNTIYLMPPYIITAEEL 409 (423)
T ss_pred HHHHHHHHHHHH-hhccCCCeEEeecc-cEEEEEEeccCcchhHHHHHHHHHHH-CCeEEEecCCEEEEeCCcccCHHHH
Confidence 556666666665 44210011112222 33322211 1 2 23445554 699998765 888552 499999
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
++++++|++++.++
T Consensus 410 d~~v~~l~~al~~~ 423 (423)
T PRK05964 410 DRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998764
No 230
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=6.8e-18 Score=161.94 Aligned_cols=158 Identities=19% Similarity=0.141 Sum_probs=121.0
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCCC
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP 151 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~ 151 (410)
......|.+.++++... +..++ +++|++|+..+ +.+.+.+||+|+++.+.|++.. ..++..|.+
T Consensus 63 ~p~~~~Le~~lA~leg~--------~~al~--~~sG~~Ai~~a--l~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 63 NPTTDVFEKRIAALEGG--------IGALA--VSSGQAAITYS--ILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 44567899999999532 23445 79999999988 4555789999999999987543 345678888
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
++.++. .|++.+++.+++ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.... .
T Consensus 131 v~~vd~-------~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~-~--- 193 (431)
T PRK08248 131 VKFVDP-------SDPENFEAAITD---KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPY-L--- 193 (431)
T ss_pred EEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccc-c---
Confidence 888875 378899988875 5777777899999999776 4577788999999999999975311 1
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
.. ++ ..+.++++.|++|.+|.+|.++|++++
T Consensus 194 ~~--pl-----~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 194 LR--PI-----EHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred CC--hh-----HcCCCEEEEcCccccCCCCCceEEEEE
Confidence 11 11 234678899999999999999999854
No 231
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=8.6e-18 Score=160.01 Aligned_cols=167 Identities=18% Similarity=0.174 Sum_probs=120.8
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCCCc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW 152 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~ 152 (410)
....++++.++++... +..+++ ++|+.++..+ + ..+.+||+|++++|.|++.. ..++..|.++
T Consensus 54 p~~~~le~~lA~l~g~-------~~~v~~---~sG~~ai~~~--l-~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v 120 (390)
T PRK08064 54 PTREALEDIIAELEGG-------TKGFAF---ASGMAAISTA--F-LLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEH 120 (390)
T ss_pred hhHHHHHHHHHHHhCC-------CCeEEE---CCHHHHHHHH--H-HHhCCCCEEEEccCccchHHHHHHHHHHHcCCEE
Confidence 3467899999999533 234544 7778888766 3 35779999999999998543 4455688888
Q ss_pred cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283 153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 232 (410)
Q Consensus 153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 232 (410)
+.++. .|++.+++.+++ +++++++++|+||||.+. ++++|.++|+++|+++|+|++|..+... .
T Consensus 121 ~~v~~-------~d~~~l~~~l~~---~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~~---~ 184 (390)
T PRK08064 121 TFVDM-------TNLEEVAQNIKP---NTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLLQ---K 184 (390)
T ss_pred EEECC-------CCHHHHHHhcCC---CceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCccccc---C
Confidence 88875 267888888865 678888899999999965 5667777799999999999998765421 0
Q ss_pred chhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHH
Q 015283 233 DASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
++ ..+.++++.|++|.++ .+|...|++ +++++++++++..
T Consensus 185 ---~~-----~~g~Divv~S~tK~~~G~~~~laG~~--v~~~~~~~~~l~~ 225 (390)
T PRK08064 185 ---PL-----DLGADVVLHSATKFLAGHSDVLAGLA--VVKDEELAQKLYF 225 (390)
T ss_pred ---ch-----hhCCcEEEeecceeccCCccceeEEE--EeCCHHHHHHHHH
Confidence 11 1135688999999985 344556776 3456676666554
No 232
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.80 E-value=2e-17 Score=157.87 Aligned_cols=199 Identities=17% Similarity=0.071 Sum_probs=137.5
Q ss_pred ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCC
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA 129 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd 129 (410)
|.+.+..++++.+.+..+. |.......++++++++++... +.++ +++|++|+.++. ... +.+||
T Consensus 6 ~~~~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~~--------~~v~--~~sgt~al~~~l--~al~~~~Gd 70 (380)
T TIGR03588 6 QSIDQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGAK--------YAVA--FNSATSALHIAC--LALGVGPGD 70 (380)
T ss_pred CCCCHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCCC--------eEEE--EcCHHHHHHHHH--HHcCCCCCC
Confidence 3345666777777765543 434456789999999997442 2334 578999999873 333 56999
Q ss_pred EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 015283 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADV 208 (410)
Q Consensus 130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~ 208 (410)
+|+++.++|..+...+...|++++.+++. .+++.+|++++++.+++.+ +++++++ +.|++|.. .++++|.++
T Consensus 71 ~Viv~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~t~~v~---~~~~~G~~---~~~~~i~~l 143 (380)
T TIGR03588 71 RVWTTPITFVATANCALYCGAKVDFVDID-PDTGNIDEDALEKKLAAAKGKLPKAIV---PVDFAGKS---VDMQAIAAL 143 (380)
T ss_pred EEEeCCcchHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHhhcccCCCceEEE---EeCCCCcc---CCHHHHHHH
Confidence 99999999999999999999999999984 3567899999999997311 2566666 45678984 457888888
Q ss_pred HHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHH
Q 015283 209 IQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 209 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
|++||++||+|++++.... .+....+ .....++.+.|++ |.++. | ..|++ ++.++++.++++.
T Consensus 144 ~~~~~~~lI~D~a~a~g~~--~~~~~~g-----~~~~~d~~~~S~~~~K~~~~-~-~GG~v--~~~~~~~~~~~~~ 208 (380)
T TIGR03588 144 AKKHGLKIIEDASHALGAE--YGGKPVG-----NCRYADATVFSFHPVKIITT-A-EGGAV--TTNDEELAERMRL 208 (380)
T ss_pred HHHcCCEEEEECCCcccCc--cCCEeCC-----CccccceEEEecCCCCcccc-c-CceEE--EECCHHHHHHHHH
Confidence 9999999999999764331 1111111 1001256666765 88764 3 34555 5667777766654
No 233
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.80 E-value=6.6e-19 Score=161.81 Aligned_cols=174 Identities=15% Similarity=0.003 Sum_probs=126.9
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV 150 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~ 150 (410)
..+.|..-+.++++.+++++.. .+-+++ ++|+|+++..+ +...+.+||+|+++.++|.++...+...|+
T Consensus 53 ~l~~~~g~i~~~~~~~A~~~ga-------~~~~~~--~~Gst~a~~~~--l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~ 121 (294)
T cd00615 53 DLLDPTGPIKEAQELAARAFGA-------KHTFFL--VNGTSSSNKAV--ILAVCGPGDKILIDRNCHKSVINGLVLSGA 121 (294)
T ss_pred CCCCCChHHHHHHHHHHHHhCC-------CCEEEE--cCcHHHHHHHH--HHHcCCCCCEEEEeCCchHHHHHHHHHCCC
Confidence 3344555578999999998643 233444 78889999887 455578999999999999999888888999
Q ss_pred CccceeeecCCC----cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCC-
Q 015283 151 PWSEYRYYDPKT----VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF- 225 (410)
Q Consensus 151 ~~~~v~~~~~~~----~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~- 225 (410)
+++.++...... ..+|++.+++.+++. ++++++++++| ||||.+.+ +++|+++|+++|+++++||+|...
T Consensus 122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~ 196 (294)
T cd00615 122 VPVYLKPERNPYYGIAGGIPPETFKKALIEH-PDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHF 196 (294)
T ss_pred EEEEecCccCcccCcCCCCCHHHHHHHHHhC-CCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhh
Confidence 888886632222 368999999998753 34666666788 79999775 678888899999999999998653
Q ss_pred CCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 226 ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
.+.+ .. .. .....+.++++.|++|++ +|++.|+++
T Consensus 197 ~~~~---~~-~~--~~~~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 197 RFHP---IL-PS--SAAMAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred ccCc---cc-Cc--chhhcCCcEEEEchhccc--chHhHHHHH
Confidence 2221 00 11 111235789999999985 678776653
No 234
>PRK05939 hypothetical protein; Provisional
Probab=99.80 E-value=2.7e-17 Score=156.43 Aligned_cols=155 Identities=15% Similarity=0.148 Sum_probs=120.1
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccce
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEY 155 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v 155 (410)
...++++++++.... ..+++ ++|+.|+..+ +...+.+||+|+++++.|+.+.. .++..|.+++.+
T Consensus 49 ~~~lE~~la~leg~~-------~~v~~---ssG~~Ai~~~--l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v 116 (397)
T PRK05939 49 TAALEAKITKMEGGV-------GTVCF---ATGMAAIAAV--FLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV 116 (397)
T ss_pred HHHHHHHHHHHhCCC-------eEEEe---CCHHHHHHHH--HHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE
Confidence 459999999985332 34544 7778999887 44457899999999999987644 455678888877
Q ss_pred eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283 156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 235 (410)
Q Consensus 156 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~ 235 (410)
+. .|++++++.+.+ +++++++++|+||||. ..++++|+++|+++|+++|+|++|..... .++
T Consensus 117 ~~-------~d~e~l~~~l~~---~tklV~vesp~NptG~---v~dl~~I~~la~~~gi~livD~t~a~~~~--~~~--- 178 (397)
T PRK05939 117 DA-------TDVQNVAAAIRP---NTRMVFVETIANPGTQ---VADLAGIGALCRERGLLYVVDNTMTSPWL--FRP--- 178 (397)
T ss_pred CC-------CCHHHHHHhCCC---CCeEEEEECCCCCCCC---HHhHHHHHHHHHHcCCEEEEECCcccccc--cCc---
Confidence 65 378999988864 6788888999999999 57899999999999999999999754321 110
Q ss_pred HhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 236 SVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 236 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
...+.++++.|+||.++..|.++|++++
T Consensus 179 ------~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 179 ------KDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred ------cccCCEEEEecCeecccCCCCeEEEEEe
Confidence 0124679999999999989999999743
No 235
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=3.8e-17 Score=150.61 Aligned_cols=196 Identities=22% Similarity=0.184 Sum_probs=145.4
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEE
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 132 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl 132 (410)
+.+..++++.+.+.+++... ..-..++.+++++|+..+ ..+. +++||.|++++.+.+. +.|||+|+
T Consensus 13 i~~~e~~~v~~vl~sg~i~~---G~~v~~FE~~~ae~~G~k--------~ava--~~sgT~AL~laL~al~-ig~GDeVI 78 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG---GPFVRRFEQAFAEYLGVK--------YAVA--VSSGTAALHLALLALA-IGPGDEVI 78 (374)
T ss_pred cchHHHHHHHHHHHcCCeec---ChHHHHHHHHHHHHhCCC--------eEEE--ecChHHHHHHHHHhcC-CCCCCEEE
Confidence 45777788888887766222 234679999999996443 4544 6999999999854333 77999999
Q ss_pred EcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 015283 133 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 212 (410)
Q Consensus 133 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~ 212 (410)
+++-+|....+.+...|++++.++. +.+++.+|++.+++.|.+ ++++|+ |-+-.|. ..++++|.++|++|
T Consensus 79 ~ps~TfvATan~i~~~Ga~PVFvDi-d~~T~nid~~~ie~aIt~---~tKAIi---pVhl~G~---~~dm~~i~~la~~~ 148 (374)
T COG0399 79 VPSFTFVATANAVLLVGAKPVFVDI-DPDTLNIDPDLIEAAITP---RTKAII---PVHLAGQ---PCDMDAIMALAKRH 148 (374)
T ss_pred ecCCchHHHHHHHHHcCCeEEEEec-CCcccCCCHHHHHHHccc---CCeEEE---EehhccC---CCCHHHHHHHHHHc
Confidence 9999999999999999999999998 467899999999999986 688888 4566787 55888888889999
Q ss_pred CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283 213 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 285 (410)
Q Consensus 213 ~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 285 (410)
|++||+|.+ +.++.. +... +....+ ++.++|| +|.++ +|. .|.+ ++.+++++++++..-.
T Consensus 149 ~l~vIEDaA-qa~Ga~-y~gk-----~vGt~G--d~~~fSF~~~K~it-tgE-GGav--~tnd~ela~k~~~lr~ 210 (374)
T COG0399 149 GLPVIEDAA-QAHGAT-YKGK-----KVGSFG--DIGAFSFHATKNLT-TGE-GGAV--VTNDEELAEKARSLRN 210 (374)
T ss_pred CCeEEEEcc-hhccCe-ecCc-----cccccc--ceEEEEecCCCCcc-ccC-ceEE--EeCCHHHHHHHHHHHH
Confidence 999999999 444432 1111 112222 3444455 88887 453 3555 6888888887766443
No 236
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.80 E-value=1.9e-17 Score=157.47 Aligned_cols=195 Identities=18% Similarity=0.131 Sum_probs=132.0
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEE
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 132 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl 132 (410)
..+.-.+++.+.+..+. .|+ ..++++++.+++.+..+ .+++++ ++||++++.++... ..+.+||+|+
T Consensus 9 ~~~~~~~~~~~~l~~~~--~~g----~~~~~~~~e~~la~~~g----~~~~v~--~~sgt~al~~~l~~-~~~~~Gd~Vi 75 (375)
T PRK11706 9 VVGTELDYIQQAMSSGK--LCG----DGGFTRRCQQWLEQRFG----SAKVLL--TPSCTAALEMAALL-LDIQPGDEVI 75 (375)
T ss_pred CCHHHHHHHHHHHHcCC--ccC----CCHHHHHHHHHHHHHhC----CCeEEE--ECCHHHHHHHHHHH-hCCCCCCEEE
Confidence 34555666666665432 221 22445555554433333 367888 89999999886322 1256999999
Q ss_pred EcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 015283 133 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 212 (410)
Q Consensus 133 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~ 212 (410)
++.|+|..+...+...|++++.+++. .+++.+|++++++.+.+ +++++++ .|+||.. .++++|.++|+++
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v~~d~d-~~~~~~d~~~le~~i~~---~tk~i~~---~~~~G~~---~~~~~i~~la~~~ 145 (375)
T PRK11706 76 MPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIEAAITP---KTRAIVP---VHYAGVA---CEMDTIMALAKKH 145 (375)
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhcCC---CCeEEEE---eCCCCCc---cCHHHHHHHHHHc
Confidence 99999999999999999999999874 45678999999998875 5666663 3679984 5677888889999
Q ss_pred CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHHH
Q 015283 213 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQ 283 (410)
Q Consensus 213 ~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 283 (410)
|++||+|++|+.+... +... .... ..+.+.||+ |.++ +|.+.++ ++.++++++++...
T Consensus 146 ~i~vIeD~a~a~g~~~--~~~~-----~g~~--~~~~~~Sf~~~K~l~-~g~gG~~---~~~~~~~~~~~~~~ 205 (375)
T PRK11706 146 NLFVVEDAAQGVMSTY--KGRA-----LGTI--GHIGCFSFHETKNYT-AGEGGAL---LINDPALIERAEII 205 (375)
T ss_pred CCEEEEECcccccccc--CCee-----eecC--cCEEEEeCCCCcccc-ccCCeEE---EECCHHHHHHHHHH
Confidence 9999999997765521 1111 0111 133444544 9997 5777555 45677877765553
No 237
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=1.7e-17 Score=160.64 Aligned_cols=341 Identities=11% Similarity=0.033 Sum_probs=188.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|.--...|+. .|.+.+++.+++.......+ .....+.+..+++.+....... ..+.+.+ +++|++
T Consensus 56 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~~-~~~~v~f--~~sGse 128 (443)
T PRK06058 56 NRLIDLGSGIAVTSVGNS--APRVVEAVREQVARFTHTCF--MVTPYEGYVAVAEQLNRLTPGD-HEKRSAL--FNSGAE 128 (443)
T ss_pred CEEEEcCcchhhhccCCC--CHHHHHHHHHHHHhccCccc--cccCCHHHHHHHHHHHHhCCCC-CCCEEEE--eCCcHH
Confidence 456777766532344554 58999998888754211111 1112234444444443322100 0247888 899999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CC--------C-----CccceeeecC--C--CcccC--------h
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDP--K--TVGLD--------F 167 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g--------~-----~~~~v~~~~~--~--~~~~d--------~ 167 (410)
|++.+.++.+.+...++|+....+|.++...... .+ . .+..++.... + ....+ +
T Consensus 129 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (443)
T PRK06058 129 AVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAI 208 (443)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHH
Confidence 9999988887776668999999999777532221 11 0 1111221000 0 00011 1
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCCCC-CCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 168 EGMIADIKAAPGGSFILLHGCAHNPT-GIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p~NPt-G~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
+.+++.+. +++..+++ ..|-+.. |... +.+.+++|.++|++||+++|.||++.+|+.. ...+.... .+..+
T Consensus 209 ~~l~~~~~--~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRt---G~~fa~~~-~gv~P 281 (443)
T PRK06058 209 TVIEKQVG--ADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFART---GAWFACEH-EGIVP 281 (443)
T ss_pred HHHHHhhC--CCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---hhhhHHHh-cCCCC
Confidence 12222222 23455555 3454554 5443 4667999999999999999999999988632 22332222 12223
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
+++ +++|.++ +|+++|++++ ++++.+.+ .......+.+...+++.++...|+. +. + +...+
T Consensus 282 Div---~~gK~l~-~G~Pi~av~~---~~~i~~~~----~~~~~~~T~~gnpl~~aaa~a~L~~--~~----~--~~l~~ 342 (443)
T PRK06058 282 DLI---TTAKGIA-GGLPLSAVTG---RAEIMDAP----HPGGLGGTYGGNPVACAAALAAIET--IE----E--DDLVA 342 (443)
T ss_pred CEE---EEccccc-CCCccEEEEE---cHHHHhhc----cCCCCCCCCCCCHHHHHHHHHHHHH--HH----H--cCHHH
Confidence 444 4589999 8999999755 77754443 2222222334555555555544431 10 0 13445
Q ss_pred HHHHHHHHHHHHhhhccCCCCC-cccccCCcceeee--cCC-----CHH----HHHHhhhcCcEEEcCCC------eEEe
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFSF--TGL-----NKA----QSDNMTNKWHVYMTKDG------RISL 387 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~--~~~-----~~~----~~~~ll~~~gi~v~~~g------Ris~ 387 (410)
+++++.+++.+.|+ ++....+ +..+...+.++.+ ... +.+ +...+++ +||.+.+++ ||..
T Consensus 343 ~~~~~g~~l~~~L~-~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~lr~~P 420 (443)
T PRK06058 343 RARQIEALMTDRLR-ALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHA-AGVIVLTCGTYGNVIRLLP 420 (443)
T ss_pred HHHHHHHHHHHHHH-HHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHH-CCeEEeccCCCCCEEEEEC
Confidence 56666666666665 5421111 1223444444422 111 122 2344444 699998753 6753
Q ss_pred c-CCCcccHHHHHHHHHHHhhhc
Q 015283 388 A-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 388 ~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ ..|++++++++++|+++++++
T Consensus 421 pl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 421 PLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred CCccCHHHHHHHHHHHHHHHHhC
Confidence 3 249999999999999998753
No 238
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=2.5e-17 Score=158.22 Aligned_cols=324 Identities=15% Similarity=0.142 Sum_probs=185.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc------CcCCcccHHHHH----HHHHHhcCCCCCcccCCce
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNK----VTAELLFGADNSVLKEQRV 103 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~----aia~~~~~~~~~~~~~~~i 103 (410)
...+||-.+++ +++|.+++++...+...+..+ |.....+.++.+ .+++++... .-+
T Consensus 28 ~~~~~l~~sen-------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~-------~al 93 (416)
T PRK13034 28 QDHLELIASEN-------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD-------YAN 93 (416)
T ss_pred hcCeeeccccc-------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC-------ceE
Confidence 35677776553 247999999887741211111 212234567777 888885332 222
Q ss_pred EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcch-hhhhhh--CCCCc--cceeeecCCCcccChhhHHHHHhcCC
Q 015283 104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFND--ARVPW--SEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~~~~~~--~g~~~--~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
++ +++|+.|+..+ +.+.+.+||+|+++..+|.+. ...++. .+... ..+++ +..++.+|++++++.++..
T Consensus 94 v~--~~SG~~A~~~~--l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~- 167 (416)
T PRK13034 94 VQ--PHSGSQANGAV--YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGV-DRLTGLIDYDEVEELAKEH- 167 (416)
T ss_pred Ee--cCCcHHHHHHH--HHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccc-ccccCCcCHHHHHHHHhhc-
Confidence 33 58899999988 455578999999999988763 222221 12111 12332 2335668999999888652
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
+++++++..+. +|. ..++.+|.++|++||+++++|+++...... .+. . .......+++++|++|.++
T Consensus 168 -~~klVi~~~~~--~g~---~~dl~~l~~la~~~g~~livD~Aha~G~~~-~g~---~---~~~~~~~Di~~~s~~K~l~ 234 (416)
T PRK13034 168 -KPKLIIAGFSA--YPR---ELDFARFREIADEVGALLMVDMAHIAGLVA-AGE---H---PNPFPHAHVVTTTTHKTLR 234 (416)
T ss_pred -CCeEEEECCCc--ccc---ccCHHHHHHHHHHcCCEEEEeCcccccCcc-cCC---C---CCCCCCceEEEEeCcccCC
Confidence 45666654443 466 446667777799999999999996543322 111 0 0111235788999999984
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcc-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
.+. .|++ ++.++++.+++ +......+ +.+......++...+.. . ......++++++.++.+++.+.
T Consensus 235 g~~--GG~v--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~aa~~~al~~--~---~~~~~~~~~~~l~~~a~~l~~~ 301 (416)
T PRK13034 235 GPR--GGMI--LTNDEEIAKKI----NSAVFPGLQGGPLMHVIAAKAVAFGE--A---LQPEFKTYAKQVIANAQALAEV 301 (416)
T ss_pred CCC--CeEE--EECcHHHHHHH----HhhcCCcccCCccHHHHHHHHHHHHH--H---hChhHHHHHHHHHHHHHHHHHH
Confidence 222 2554 34444433332 22222221 11222111111111111 0 0011235678899999999999
Q ss_pred hhhccCCCCCccccc--CCccee-eecCC---CHHHHHHhhhcCcEEEcC----------C---C-eEEec-----CCCc
Q 015283 338 LSAKDKSGKDWSFIL--RQIGMF-SFTGL---NKAQSDNMTNKWHVYMTK----------D---G-RISLA-----GLSL 392 (410)
Q Consensus 338 l~~~~g~~~~~~~~~--~~~~~~-~~~~~---~~~~~~~ll~~~gi~v~~----------~---g-Ris~~-----~~~~ 392 (410)
|. +.|+ .... +.+... +.++. +...+.+.|++.||.+.+ . + |+++. +.++
T Consensus 302 L~-~~G~----~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~ 376 (416)
T PRK13034 302 LK-ERGY----DLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGE 376 (416)
T ss_pred HH-HcCC----EeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCH
Confidence 98 8874 3322 222222 22232 455565666667999864 1 2 87743 3478
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
++++++++.|++++..
T Consensus 377 ~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 377 AEFREIANWILDVLDD 392 (416)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988764
No 239
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.8e-17 Score=146.01 Aligned_cols=313 Identities=17% Similarity=0.078 Sum_probs=199.4
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 133 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~ 133 (410)
.|.+.+++.++...+ +..|+..+-..++.+.+++.+.+ +.++| +.+||+++.++ +...+.||+.|++
T Consensus 13 ~~~m~eam~~a~~~~-~~~YG~D~~~~~~e~~~ae~~g~--------~a~~F--v~sGT~aN~la--l~~~~~~~~~vi~ 79 (342)
T COG2008 13 TPEMREALAAANAVG-DDVYGEDPTTNALEQRIAELFGK--------EAALF--VPSGTQANQLA--LAAHCQPGESVIC 79 (342)
T ss_pred CHHHHHHHHhccccC-CCCCCCCHHHHHHHHHHHHHhCC--------ceEEE--ecCccHHHHHH--HHHhcCCCCeEEE
Confidence 699999998876433 47787766667777777777422 57888 89999999998 5666789999999
Q ss_pred cCCCCcchhhh--hhhCCCCccceeeecCCCcccChhhHHHHHhc----CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283 134 SSPTWGNHKNI--FNDARVPWSEYRYYDPKTVGLDFEGMIADIKA----APGGSFILLHGCAHNPTGIDPTPEQWEKIAD 207 (410)
Q Consensus 134 ~~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~ 207 (410)
..-.|....+. .+..+ .+..++..+..++.++++++++.+.. +.+.+.++.. +.+|.-|+++|++++++|.+
T Consensus 80 ~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e-~~~te~GtVy~l~el~~i~~ 157 (342)
T COG2008 80 HETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE-NTATEGGTVYPLDELEAISA 157 (342)
T ss_pred eccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe-eccCCCceecCHHHHHHHHH
Confidence 88777544331 22222 23334444457788999999998874 2334444443 34446699999999999999
Q ss_pred HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhh
Q 015283 208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL 287 (410)
Q Consensus 208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~ 287 (410)
+|+++|+.|..|.+......-...++.. .+ .. ..+.+..++||..+.| +|.+ +..+.+.++++....+..
T Consensus 158 ~~k~~~l~LHmDGAR~~nA~valg~~~~---~~-~~-~~D~v~~~~tK~g~~~---~gAi--v~gn~~~~~~a~~~rK~~ 227 (342)
T COG2008 158 VCKEHGLPLHMDGARLANALVALGVALK---TI-KS-YVDSVSFCLTKGGGAP---VGAI--VFGNRDFAKRARRWRKRA 227 (342)
T ss_pred HHHHhCCceeechHHHHHHHHHcCCCHH---HH-Hh-hCCEEEEecccCCcce---eeeE--EEcCHHHHHHHHHHHHHh
Confidence 9999999999999953322110111111 11 11 2556667889987655 4887 567888888776655533
Q ss_pred ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCCCHH
Q 015283 288 ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGLNKA 366 (410)
Q Consensus 288 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 366 (410)
-.. .. -..+........|++.-+ .....+-.+..+.|.+.|. .. | ++...+..+..+|+.+...
T Consensus 228 Ggl-~~-k~r~laA~~~~~l~~~~~--------~~~~~Han~mA~~La~~~~-~~~G----~~~~~~~~tN~vf~~l~~~ 292 (342)
T COG2008 228 GGL-MR-KARFLAAQGLYALEDDVW--------RLAADHANAMAARLAEGLE-AKPG----VKLAFPVETNMVFVRLPES 292 (342)
T ss_pred ccc-Hh-hhhHHHHHHHHHHhccHH--------HHHHHHHHHHHHHHHHhhh-hcCC----ceeccCCcccEEEEECChH
Confidence 221 11 112212223444554321 2333444445788888887 44 5 3555555566777766433
Q ss_pred HH-----HHhhhcCcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHh
Q 015283 367 QS-----DNMTNKWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 367 ~~-----~~ll~~~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
.. ...+...|+.+.+.+ ||..+. .+++++++++..++++.
T Consensus 293 ~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 293 AIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 22 233334577777764 885332 38999999999998864
No 240
>PRK05968 hypothetical protein; Provisional
Probab=99.80 E-value=3.2e-17 Score=156.07 Aligned_cols=214 Identities=14% Similarity=0.092 Sum_probs=139.5
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCCC
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP 151 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~ 151 (410)
.....++++.+++++... ..++ +++|+.|+.++ +...+.+||+|+++.+.|.... ..+...|.+
T Consensus 62 ~p~~~~le~~lA~l~g~~-------~av~---~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 129 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAE-------DARG---FASGMAAISST--VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVE 129 (389)
T ss_pred ChhHHHHHHHHHHHhCCC-------cEEE---ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCce
Confidence 334679999999996432 3344 47788888877 4445789999999999998643 455667888
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
++.++. .|++.+++.+. +++++++++|.|| .++..++++|+++|+++|+++|+|++|.......
T Consensus 130 v~~vd~-------~d~~~l~~~i~----~tklV~ie~pt~~---~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-- 193 (389)
T PRK05968 130 VDYVDG-------RDEEAVAKALP----GAKLLYLESPTSW---VFELQDVAALAALAKRHGVVTMIDNSWASPVFQR-- 193 (389)
T ss_pred EEEeCC-------CCHHHHHHhcc----cCCEEEEECCCCC---CCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC--
Confidence 887764 27788888773 4556665555554 5558999999999999999999999987654221
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
++ .. ..++++.|+||.++.+| .+.|+++ .+++.+++++....... ....+...+.++...|+.-
T Consensus 194 ----p~----~~-g~Divv~S~tK~l~g~~~~~gG~i~---~~~~~~~~l~~~~~~~~---g~~~~~~~A~~~l~~L~tl 258 (389)
T PRK05968 194 ----PI----TL-GVDLVIHSASKYLGGHSDTVAGVVA---GSKEHIARINAEAYPYL---GAKLSPFEAWLLLRGLRTL 258 (389)
T ss_pred ----ch----hc-CCcEEEeeccccccCCCCeEEEEEE---ECHHHHHHHHHHHHHhC---CCCCChHHHHHHHcccCcH
Confidence 11 11 23688889999998655 4678764 37777766654322111 1223334334444444432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
....++-.++...+.+.|+ +.+
T Consensus 259 ----------~~r~~~~~~~a~~la~~L~-~~p 280 (389)
T PRK05968 259 ----------PLRMKAHEASALEIARRLK-AHP 280 (389)
T ss_pred ----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence 2333344445666777777 654
No 241
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.80 E-value=3.1e-17 Score=157.30 Aligned_cols=343 Identities=11% Similarity=0.050 Sum_probs=193.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|.--...|+. +|.+.+++.+++.. ...+.. .......++.+.+++.+....+ . .+.+.+. +++|
T Consensus 35 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~--~-~~~~~f~-~~sG 108 (412)
T TIGR02407 35 KEYIDFFAGAGALNYGHN--NPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG--L-DYKVQFP-GPTG 108 (412)
T ss_pred CEEEEcccchhhccCCCC--CHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC--C-CceEEEe-CCCc
Confidence 568898887543344554 59999998887753 221111 1122223444444444211100 1 1245441 4799
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCC-cccChhhHHHHHhcC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT-VGLDFEGMIADIKAA 177 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~-~~~d~~~l~~~i~~~ 177 (410)
++|++.+.++.+.+....+|+..+.+|.+...... ..|. .+..+|..+... ..-+++.+++.+.++
T Consensus 109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence 99999998888777655789988888866643222 1111 112222211000 002366677777643
Q ss_pred C---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283 178 P---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 253 (410)
Q Consensus 178 ~---~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 253 (410)
. +...++++...+++.|. +++.+.+++|.++|++||+++|+||++.+|+-. ...+.... ....++++ ++
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt---G~~~a~~~-~~v~PDi~---~~ 261 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRT---GTFFSFEP-AGIEPDIV---CL 261 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---chhHHhcc-cCCCCCEE---Ee
Confidence 2 24566676777899998 567777999999999999999999999887632 12222211 12223433 68
Q ss_pred cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHH-HHHHH-HhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGA-RIVAN-VVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~a~~-~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
||.++..|+|+|++++ ++++ +.+. ......++. ++...+. .++.. ++.++++ .++.++..+++++.
T Consensus 262 ~K~lg~~G~pigav~~---~~~~-~~~~---~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l----~~~~~~~g~~l~~~ 330 (412)
T TIGR02407 262 SKSISGYGLPLALTLI---KPEL-DVWK---PGEHNGTFRGNNLAFVTATAALEYYWSDDAF----EKAVQRKSEIIQER 330 (412)
T ss_pred chhccCCccceeEEEE---chhh-hccC---CCccCCCCCccHHHHHHHHHHHHHHhcccHH----HHHHHHHHHHHHHH
Confidence 8999843999999855 5553 3221 111122232 2322222 22233 3444433 23334444444444
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecCCC-H----HHHHHhhhcCcEEEcCCC------eEEecC-CCcccHHHH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-K----AQSDNMTNKWHVYMTKDG------RISLAG-LSLAKCEYL 398 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~----~~~~~ll~~~gi~v~~~g------Ris~~~-~~~~~i~~~ 398 (410)
.+.+.+.+. . +....+..|++.|+.+. . .+...+++ +||.+.+.+ ||+.+. +++++++++
T Consensus 331 l~~l~~~~~-~------~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~-~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~ 402 (412)
T TIGR02407 331 LDRIVAEYP-E------LIKQVRGRGLMQGIECGDGDLAGKIAKAAFE-NGLIIETSGPNDEVIKLLPPLTIDEETLQQG 402 (412)
T ss_pred HHHHHhhCC-C------ceEeeecceeEEEEEecChHHHHHHHHHHHH-CCCEEeccCCCCCEEEEECCCCCCHHHHHHH
Confidence 333333221 1 12234556788887662 1 23445554 699997643 777553 599999999
Q ss_pred HHHHHHHhhh
Q 015283 399 ADAIIDSYHN 408 (410)
Q Consensus 399 ~~~l~~~l~~ 408 (410)
+++|++++++
T Consensus 403 ~~~l~~~l~~ 412 (412)
T TIGR02407 403 LDILEQAVEE 412 (412)
T ss_pred HHHHHHHHhC
Confidence 9999999864
No 242
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=3.8e-17 Score=155.76 Aligned_cols=336 Identities=11% Similarity=0.010 Sum_probs=195.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|..-+..|+. .|.+.+++.+++.... +.+. ....+....+++.+....+ .+.+.+ +++|++
T Consensus 36 ~~~lD~~sg~~~~~lGh~--~p~v~~a~~~q~~~~~-~~~~--~~~~~~~~~la~~l~~~~~----~~~v~f--~~SGse 104 (395)
T PRK03715 36 KRYLDFIQGWAVNCLGHC--NPGMVEALAAQAEKLI-NPSP--AFYNEPMAKLAGLLTQHSC----FDKVFF--ANSGAE 104 (395)
T ss_pred CEEEECCcChhhccCCCC--CHHHHHHHHHHHHhcc-cccc--cccCHHHHHHHHHHhhccC----CCEEEE--eCCcHH
Confidence 578999887543456665 4888888888775422 1111 1234667777887654321 367888 999999
Q ss_pred HHHHHHHHHHHhC----CC-CEEEEcCCCCcchh-hhhhhCCCCc---cceeeecC--CCcccChhhHHHHHhcCCCCcE
Q 015283 114 SLRLAAALIERYF----PG-AKVLISSPTWGNHK-NIFNDARVPW---SEYRYYDP--KTVGLDFEGMIADIKAAPGGSF 182 (410)
Q Consensus 114 a~~~~~~~~~~~~----~g-d~Vl~~~p~y~~~~-~~~~~~g~~~---~~v~~~~~--~~~~~d~~~l~~~i~~~~~~~~ 182 (410)
|++.+.++.+.+. +| .+|+..+.+|.+.. ..+...|... ...|.... ...-.|++.+++.+.+ ++.
T Consensus 105 A~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~a 181 (395)
T PRK03715 105 ANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD---KTV 181 (395)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC---Cce
Confidence 9999988776542 23 57888887776543 2333333211 11111000 0001377888888764 566
Q ss_pred EEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC
Q 015283 183 ILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 261 (410)
Q Consensus 183 ~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 261 (410)
++++...++..|... +.+.+++|.++|++||+++|+||++.+++-. ...+....+ +..+++ .+++|.++ .|
T Consensus 182 avi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRt---G~~~a~~~~-gv~PDi---~t~gK~lg-~G 253 (395)
T PRK03715 182 AVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRT---GTLFAYELS-GIEPDI---MTLGKGIG-GG 253 (395)
T ss_pred EEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC---cchhhHhhc-CCCCce---eeehhhhh-CC
Confidence 677666677777765 5677999999999999999999999987532 223322222 222333 47899998 57
Q ss_pred CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283 262 ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 341 (410)
Q Consensus 262 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 341 (410)
+.+|.+.+ ++++. ........+++. .+.++..++...|+-- + -+...++++++.+++.+.|+ +
T Consensus 254 ~p~~av~~---~~~i~----~~~~~~~~~T~~-g~pl~~aaala~L~~l------~--~~~l~~~~~~~g~~l~~~L~-~ 316 (395)
T PRK03715 254 VPLAALLA---KAEVA----VFEAGDQGGTYN-GNPLMTAVGVAVISQL------L--APGFLEGVRARGEYLKEKLL-E 316 (395)
T ss_pred cceEEEEE---ccccc----cccCCCcCCCCC-CCHHHHHHHHHHHHHH------H--hccHHHHHHHHHHHHHHHHH-H
Confidence 88898744 56642 111122223333 2333334333322210 0 02445666667777777666 5
Q ss_pred cCCCCCcccccCCcceeeecCC--C-HHHHHHhhhc---CcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 342 DKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNK---WHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 342 ~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~---~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.....+...... |.+.-+.+ + ...+.+.+.+ .||++.+.+ ||+.+. .|++++++++++|+++++++
T Consensus 317 l~~~~~i~~vrG~-Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 317 LSEERGLEGERGE-GLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred HhhcCCcCeEEcc-eeEEEEEecCchHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 4211112222233 43322222 1 1222222223 399986543 887653 59999999999999998764
No 243
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.80 E-value=1.2e-17 Score=153.81 Aligned_cols=336 Identities=17% Similarity=0.149 Sum_probs=204.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...||+..|.--...|+. +|.|.+++.+++..+. .|. |...--++.|.+.+.+.. .+.|-+ +++||
T Consensus 53 n~YIDy~~~~Gp~ilGH~--~p~V~~Av~~~l~~G~--~fg~Pte~Ei~~Aell~~~~p~-------~e~vrf--vnSGT 119 (432)
T COG0001 53 NEYIDYVLGWGPLILGHA--HPAVVEAVQEQLERGL--SFGAPTELEVELAELLIERVPS-------IEKVRF--VNSGT 119 (432)
T ss_pred CEeeehhccCcccccCCC--CHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHhcCc-------ccEEEE--ecchh
Confidence 356777766543345554 5889999999987753 343 332223444444444321 378888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCC--CC------ccceeeecCCC----cccChhhHHHHHhcCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR--VP------WSEYRYYDPKT----VGLDFEGMIADIKAAPG 179 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g--~~------~~~v~~~~~~~----~~~d~~~l~~~i~~~~~ 179 (410)
+|...+.++.+.+..-|+|+..+.||.++.+.+. ..| .- ...+|.....+ .--|++.+++.+++.++
T Consensus 120 EAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~ 199 (432)
T COG0001 120 EATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGD 199 (432)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCC
Confidence 9999999999988888999999999988766544 222 11 11111100000 01289999999998766
Q ss_pred CcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
....|++.....--|.++|.++ +++|.++|+++|+++|.||+..+|...- . +...+..-.++. .+++|.+|
T Consensus 200 ~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~-g----Gaq~~~gi~PDl---ttlGKiIG 271 (432)
T COG0001 200 DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL-G----GAQGYYGVEPDL---TTLGKIIG 271 (432)
T ss_pred cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC-c----ccccccCcCcch---hhhhhhhc
Confidence 6666665555555677676666 9999999999999999999988887541 1 111111111233 37899998
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
.|+.+|.. .+..++.+.+...-.-++..+++ +|.+.++..+ ...|...+ ...+++.+..++|.+
T Consensus 272 -GGlP~ga~---gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~----------~~y~~l~~~~~~L~~ 337 (432)
T COG0001 272 -GGLPIGAF---GGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE----------GVYERLDALGERLAE 337 (432)
T ss_pred -CCcceeee---ccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc----------cHHHHHHHHHHHHHH
Confidence 89999995 44788655544333233333443 4444333333 33333210 123344444444444
Q ss_pred Hhhh---ccCCCCCcccccCCccee-ee-cCC-----------C----HHHHHHhhhcCcEEEcCCC----eEEecCCCc
Q 015283 337 SLSA---KDKSGKDWSFILRQIGMF-SF-TGL-----------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSL 392 (410)
Q Consensus 337 ~l~~---~~g~~~~~~~~~~~~~~~-~~-~~~-----------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~ 392 (410)
.|++ +.+++ +. ....+++| ++ ... + ..++..+++ .||++.|+. -+|.+. ++
T Consensus 338 gl~~~~~~~g~~--~~-v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~-~GV~l~ps~~ea~flS~ah-te 412 (432)
T COG0001 338 GLRAAAERHGIP--LT-VNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLN-RGVYLAPSQFEAGFLSTAH-TE 412 (432)
T ss_pred HHHHHHHHhCCC--eE-EeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHh-CCcccCCccccceeeeccc-CH
Confidence 4430 44532 22 22344444 22 221 1 123556666 599999985 456655 99
Q ss_pred ccHHHHHHHHHHHhhhc
Q 015283 393 AKCEYLADAIIDSYHNV 409 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~~ 409 (410)
++|++.++++.+++..+
T Consensus 413 ~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 413 EDIDRTLEAADEAFKEL 429 (432)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988764
No 244
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.79 E-value=2.5e-17 Score=158.22 Aligned_cols=159 Identities=18% Similarity=0.106 Sum_probs=121.7
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~ 150 (410)
+.....+|++.+++++.. +..++ +++|+.++..+ +...+.+||+|+++.+.|++.. ..++..|.
T Consensus 55 ~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 122 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEGG--------VAALA--VASGQAAITYA--ILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGI 122 (418)
T ss_pred CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCc
Confidence 445568999999999632 23455 79999999887 4445789999999999987543 34567888
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
+++.++. .|++.+++.+.+ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 123 ~v~~v~~-------~d~~~l~~~l~~---~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~--- 186 (418)
T TIGR01326 123 EVRFVDP-------DDPEEFEKAIDE---NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL--- 186 (418)
T ss_pred EEEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc---
Confidence 8888764 178899888865 6777778999999999765 67888889999999999999863321
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
.. .+ ..+.++++.|+||.++.+|+|+||+++
T Consensus 187 -~~-----~l--~~g~Divv~S~sK~l~g~G~~lGg~v~ 217 (418)
T TIGR01326 187 -CR-----PI--DHGADIVVHSATKYIGGHGTAIGGVIV 217 (418)
T ss_pred -CC-----ch--hcCCeEEEECccccccCCccceEEEEE
Confidence 11 11 124689999999999999999999854
No 245
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.79 E-value=1.7e-17 Score=157.30 Aligned_cols=165 Identities=16% Similarity=0.144 Sum_probs=119.8
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCccc
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSE 154 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~ 154 (410)
..++++.+++++.. ++.++ +++|+.++.++ +..+.+||+|+++.+.|.++... +...|.+++.
T Consensus 49 ~~~le~~la~l~g~--------~~~l~--~~sG~~al~~~---l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 115 (378)
T TIGR01329 49 RTALESLLAKLDKA--------DRAFA--FSSGMAALDVI---TRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVH 115 (378)
T ss_pred HHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEE
Confidence 56888888887532 34444 57788888765 33578999999999999877553 4567888888
Q ss_pred eeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283 155 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 234 (410)
Q Consensus 155 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 234 (410)
++. .|++.+++.+++ +++++++++|+||||.+. ++++|+++|+++|+++|+|++|...... .
T Consensus 116 vd~-------~d~~~le~~i~~---~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~~~----~- 177 (378)
T TIGR01329 116 VDT-------TDLDKVKAALGP---KTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPLLC----N- 177 (378)
T ss_pred eCC-------CCHHHHHHhcCc---CceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCcccccC----C-
Confidence 876 278899988874 788888899999999966 4778888899999999999997433211 1
Q ss_pred hHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHH
Q 015283 235 SSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 235 ~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
++ .. ..+++++|.+|.++- .+.+.|++ +++++++.+++..
T Consensus 178 -~l----~~-g~Di~v~S~tK~l~G~~~~~~G~v--~~~~~~~~~~~~~ 218 (378)
T TIGR01329 178 -PL----EL-GADIVYHSATKFLAGHSDVMAGVL--AVKGEEIAKKVYF 218 (378)
T ss_pred -hh----hc-CCcEEEEecceeccCCccceeEEE--EeCcHHHHHHHHH
Confidence 11 11 346899999998853 34678887 4555565455543
No 246
>PLN02509 cystathionine beta-lyase
Probab=99.79 E-value=4.7e-17 Score=156.41 Aligned_cols=221 Identities=15% Similarity=0.135 Sum_probs=139.2
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FN 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~ 146 (410)
..|... |.+ .++++.+++....+ .++.++ +++|++++.++ +..+.+||+|+++.|.|+.+... +.
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i---l~ll~~GD~VI~~~~~y~~t~~ll~~~l~ 193 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVP 193 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH---HHHhCCCCEEEEcCCchhhHHHHHHHHHH
Confidence 456543 443 35555555443332 344444 58888887654 34578999999999999988643 44
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.+++.++. .|++++++.+.+ +++++++++|+||||. ..++++|+++|+++|+++|+|++|....
T Consensus 194 ~~G~~v~~vd~-------~d~e~l~~ai~~---~TklV~lesPsNPtG~---i~Dl~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 194 RSGVVVKRVNT-------TNLDEVAAAIGP---QTKLVWLESPTNPRQQ---ISDIRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred HCCeEEEEeCC-------CCHHHHHHhCCc---CCeEEEEECCCCCCCC---HHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 67888777754 367888888864 6788888999999999 6889999999999999999999975433
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
.. . .+ ....+++++|++|.++.+|- -.|.+ .++++.+.+++.. ++.. .....+.....++..
T Consensus 261 ~~----~--pl-----~~gaDivv~S~tK~l~G~gdv~gG~v--~~~~~~l~~~~~~-~~~~---~g~~l~p~~A~l~lr 323 (464)
T PLN02509 261 LS----R--PL-----ELGADIVMHSATKFIAGHSDVMAGVL--AVKGEKLAKEVYF-LQNS---EGSGLAPFDCWLCLR 323 (464)
T ss_pred cC----C--hh-----hcCCcEEEecCcccccCCCccceeEE--EeccHHHHHHHHH-HHHh---cCCCcCHHHHHHHHh
Confidence 21 1 11 12356889999999875443 23554 3345544444332 2211 111223322222233
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.|+ .+....++..++...+.+.|+ +.+
T Consensus 324 ~L~----------tL~~R~~r~~~nA~~la~~L~-~~p 350 (464)
T PLN02509 324 GIK----------TMALRIEKQQENARKIAMYLS-SHP 350 (464)
T ss_pred hhh----------hHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 222 234555666667777777777 654
No 247
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.79 E-value=1e-16 Score=154.55 Aligned_cols=345 Identities=12% Similarity=0.082 Sum_probs=190.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCcc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|.--...|+. +|.+.+++.+++.. .+.+. +.......++.+.+++.+....+. .+.+.+ .+++|
T Consensus 39 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~---~~~~~f-~~~sG 112 (425)
T PRK09264 39 KEYIDFFAGAGALNYGHN--NPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGL---DYKVQF-TGPTG 112 (425)
T ss_pred CEeeecccchhhccCCCC--CHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCC---CceEEE-eCCCH
Confidence 568898887543344554 58999999887753 22111 111222234555555543111110 124544 04799
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhC---------CC---CccceeeecCCC-cccChhhHHHHHhcC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDA---------RV---PWSEYRYYDPKT-VGLDFEGMIADIKAA 177 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~---------g~---~~~~v~~~~~~~-~~~d~~~l~~~i~~~ 177 (410)
++|++.+.++.+.+....+|+....+|.+.... +... +. .+..+|..+... ..-|++.+++.+.+.
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence 999999998887776557888888877665432 1111 11 122233211000 012667788888643
Q ss_pred C---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283 178 P---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 253 (410)
Q Consensus 178 ~---~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 253 (410)
+ +...++++...+...|. +++.+.+++|.++|++||+++|+||++.+|+.. ...+....+ +..++++ ++
T Consensus 193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Grt---G~~~~~~~~-~v~PDi~---t~ 265 (425)
T PRK09264 193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRT---GTFFSFERA-GITPDIV---TL 265 (425)
T ss_pred cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccc---cHHHHHhhc-CCCCCEE---Ee
Confidence 2 24556665656666776 457788999999999999999999999887632 222222221 2223433 77
Q ss_pred cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015283 254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK 333 (410)
Q Consensus 254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (410)
||.++..|+++|++++ ++++ ..+. ......++. ...++..++...+.+ + |.+ ....++++++.++
T Consensus 266 ~K~l~~~G~pigav~~---~~~i-~~~~---~~~~~~T~~-gnp~~~aaa~a~l~~--~---~~~--~~l~~~~~~~g~~ 330 (425)
T PRK09264 266 SKSISGYGLPMALVLI---KPEL-DVWK---PGEHNGTFR-GNNLAFVTATAALEE--Y---WSD--DAFEKEVKAKGEL 330 (425)
T ss_pred ccccCCCccceEEEEE---chhh-hccC---CCccCCCCC-CCHHHHHHHHHHHHH--H---Hhh--hHHHHHHHHHHHH
Confidence 9999966999999855 5553 2211 111122232 222333333223211 0 010 1334445555555
Q ss_pred HHHHhhhccCCCCC-cccccCCcceeeecCCC-H----HHHHHhhhcCcEEEcCCC----eEEec---CCCcccHHHHHH
Q 015283 334 LFDSLSAKDKSGKD-WSFILRQIGMFSFTGLN-K----AQSDNMTNKWHVYMTKDG----RISLA---GLSLAKCEYLAD 400 (410)
Q Consensus 334 l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~-~----~~~~~ll~~~gi~v~~~g----Ris~~---~~~~~~i~~~~~ 400 (410)
+.+.|+ ++....+ +....+..|.+.++.+. . .+...+++ .||.+.+.+ ||.+. ..++++++++++
T Consensus 331 l~~~l~-~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~ 408 (425)
T PRK09264 331 VRERLE-EIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFE-NGLIIETSGPEDEVVKLLPPLTIDEEELEEGLD 408 (425)
T ss_pred HHHHHH-HHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHH-CCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHH
Confidence 555544 3310000 11122345666666552 2 23445554 699997753 44433 248999999999
Q ss_pred HHHHHhhh
Q 015283 401 AIIDSYHN 408 (410)
Q Consensus 401 ~l~~~l~~ 408 (410)
+|++++++
T Consensus 409 ~l~~~l~~ 416 (425)
T PRK09264 409 ILEEAVAE 416 (425)
T ss_pred HHHHHHHH
Confidence 99999865
No 248
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=4.4e-17 Score=154.29 Aligned_cols=215 Identities=15% Similarity=0.129 Sum_probs=140.3
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~ 150 (410)
+.....+|++.++++... +..++ +++|+.++..+ +..+.+||+|+++.|+|++... .+...|+
T Consensus 48 ~~p~~~~Le~~lA~l~g~-------~~~~~---~~sG~aai~~~---~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~ 114 (377)
T PRK07671 48 GNPTRAALEELIAVLEGG-------HAGFA---FGSGMAAITAV---MMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGI 114 (377)
T ss_pred CChHHHHHHHHHHHHhCC-------CceEE---eCCHHHHHHHH---HHHhCCCCEEEECCCccchHHHHHHHHHhcCCe
Confidence 344577999999999533 23344 57778777654 3457799999999999984432 3445788
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
+++.++. .|++.+++.+++ +++++++++|+||||.+ .++++|.++|+++|+++|+|++|......
T Consensus 115 ~v~~v~~-------~d~~~l~~ai~~---~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~-- 179 (377)
T PRK07671 115 EHTFVDT-------SNLEEVEEAIRP---NTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ-- 179 (377)
T ss_pred EEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC--
Confidence 8877764 378999998875 67888889999999985 46777888899999999999998754321
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
. .+ ....++++.|+||.++.++- -.|++ +++++++++++..... . ............+..-++.
T Consensus 180 --~--p~-----~~g~Divv~S~sK~l~G~~~~~~G~~--v~~~~~l~~~~~~~~~-~---~g~~~~~~~a~l~~~~l~t 244 (377)
T PRK07671 180 --S--PI-----SLGADIVLHSATKYLGGHSDVVAGLV--VVNSPELAEDLHFVQN-S---TGGILGPQDSWLLLRGLKT 244 (377)
T ss_pred --C--hh-----hhCCeEEEecCcccccCCccceeEEE--EeCcHHHHHHHHHHHH-h---hcCCCCHHHHHHHHcCcCh
Confidence 1 11 11346999999999974442 23554 4556676666553222 1 1122233322223222222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
+....++..++...+.+.|+ +.+
T Consensus 245 ----------l~~R~~~~~~na~~la~~L~-~~~ 267 (377)
T PRK07671 245 ----------LGIRMEEHETNSRAIAEFLN-NHP 267 (377)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence 23455556677777788777 553
No 249
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.79 E-value=6.3e-17 Score=155.76 Aligned_cols=209 Identities=15% Similarity=0.004 Sum_probs=137.8
Q ss_pred eeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHH
Q 015283 38 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL 117 (410)
Q Consensus 38 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~ 117 (410)
.|+.|.+.-....+.+++.-.+++.+.+.... ..+.+ -..++++++++++.. +++++ +++||+++.+
T Consensus 27 ~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~-~~~G~--~~~~fe~~lA~~~g~--------~~~v~--~~sGt~al~~ 93 (438)
T PRK15407 27 PFVPGKSPIPPSGKVIDAKELQNLVDASLDFW-LTTGR--FNDAFEKKLAEFLGV--------RYALL--VNSGSSANLL 93 (438)
T ss_pred cccCCCCCCCcCccCCCHHHHHHHHHHHHhCc-ccCCh--hHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHH
Confidence 36777662222223334443444444443322 22222 257899999999633 35767 8999999988
Q ss_pred HHHHHH-------HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 118 AAALIE-------RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 118 ~~~~~~-------~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
+...+. .+.+||+|+++.++|..+...+...|++++.+++. .+++.+|++.+++.+.+ ++++++++
T Consensus 94 aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd-~~~~~id~~~le~~i~~---~tkaVi~~--- 166 (438)
T PRK15407 94 AFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE-LPTYNIDASLLEAAVSP---KTKAIMIA--- 166 (438)
T ss_pred HHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHcCc---CCeEEEEe---
Confidence 744332 34699999999999999999999999999888873 35688999999998865 66666643
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMN 268 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~ 268 (410)
|++|. +.++++|.++|+++|++||+|++++....- ... .....+ ++.+.|| +|.+. .|. .|++
T Consensus 167 ~~~G~---p~dl~~I~~la~~~gi~vIeDaa~a~G~~~--~g~-----~~G~~g--d~~~fSf~~~k~~~-~ge-GG~l- 231 (438)
T PRK15407 167 HTLGN---PFDLAAVKAFCDKHNLWLIEDNCDALGSTY--DGR-----MTGTFG--DIATLSFYPAHHIT-MGE-GGAV- 231 (438)
T ss_pred CCCCC---hhhHHHHHHHHHHCCCEEEEECccchhhhc--CCe-----eeeccC--ceEEEeCCCCCCcc-ccC-ceEE-
Confidence 35666 567889999999999999999996543321 100 111122 3445566 56664 454 3776
Q ss_pred EEeCCchhHHHHHH
Q 015283 269 VVCSSSDLAARVKS 282 (410)
Q Consensus 269 ~~~~~~~~~~~~~~ 282 (410)
++.++++.+++..
T Consensus 232 -~t~d~~l~~~~~~ 244 (438)
T PRK15407 232 -FTNDPLLKKIIES 244 (438)
T ss_pred -EECCHHHHHHHHH
Confidence 6777776665544
No 250
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.78 E-value=5.6e-17 Score=156.84 Aligned_cols=337 Identities=16% Similarity=0.112 Sum_probs=193.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|......|+. +|.+.+++.+++.......+ +.....++.+.+++.+.. .+.+.+ +++|++
T Consensus 99 ~~yiD~~~g~g~~~lGh~--~p~v~~av~~ql~~~~~~~~-~~~~~~~lAe~l~~~~p~-------~~~v~f--~~SGsE 166 (474)
T PLN02482 99 NEYIDYVGSWGPAIIGHA--DDEVLAALAETMKKGTSFGA-PCLLENVLAEMVIDAVPS-------VEMVRF--VNSGTE 166 (474)
T ss_pred CEEEEecccccccccCCC--CHHHHHHHHHHHhhCCCCCC-CCHHHHHHHHHHHHhCCC-------CCEEEE--eCChHH
Confidence 457888776543345554 58999999888865431222 222223444445444311 368999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hC--CCC------ccceeeecC-----CCcccChhhHHHHHhcCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA--RVP------WSEYRYYDP-----KTVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~--g~~------~~~v~~~~~-----~~~~~d~~~l~~~i~~~~~ 179 (410)
|.+.+.++.+.+...++|+..+.+|.++...+. .. +.. ...++.... -.+ .|++.+++.+.++++
T Consensus 167 A~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~ 245 (474)
T PLN02482 167 ACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKG 245 (474)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCC
Confidence 999999988887666889988888877643211 10 000 000110000 001 278888888876555
Q ss_pred CcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 180 GSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
...++++.....-.|.+.+ .+-++++.++|++||+++|+||++.+|..+ ..+.. ...+..+++ .+++|.+|
T Consensus 246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g----~~ga~-~~~gv~PDi---~t~gK~lg 317 (474)
T PLN02482 246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIA----YGGAQ-EYFGITPDL---TTLGKVIG 317 (474)
T ss_pred ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecC----cchHh-HHhCCCCCE---EEecchhh
Confidence 5666676666666787665 556999999999999999999998777432 11121 112222343 37899998
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
.|+.+|.+.+ ++++.+.+...-......+++ +|...+...+ ...+.++ ...++++++.+++.+
T Consensus 318 -gG~Pigav~g---~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~-----------~~~~~~~~~g~~l~~ 382 (474)
T PLN02482 318 -GGLPVGAYGG---RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQP-----------GTYEYLDKITKKLIQ 382 (474)
T ss_pred -CCCceEEEEE---cHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhcc-----------CHHHHHHHHHHHHHH
Confidence 7899999744 777555543210111222332 3333322222 3333332 234455555555666
Q ss_pred HhhhccCCCCCcccc-cCCccee-eec--C-C---------CH----HHHHHhhhcCcEEEcCCC----eEEecCCCccc
Q 015283 337 SLSAKDKSGKDWSFI-LRQIGMF-SFT--G-L---------NK----AQSDNMTNKWHVYMTKDG----RISLAGLSLAK 394 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~-~~~~~~~-~~~--~-~---------~~----~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~ 394 (410)
.|. ++..+..+... ....+++ +++ + . +. .+...+++ +||++.|.+ .+++. +|++|
T Consensus 383 ~L~-~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~~~~~~~psl~-ht~~d 459 (474)
T PLN02482 383 GIL-EAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPSQFEAGFTSLA-HTEED 459 (474)
T ss_pred HHH-HHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEeccCCCCCcCCCC-CCHHH
Confidence 555 44311101111 1223333 111 0 0 11 23455555 699998864 24444 49999
Q ss_pred HHHHHHHHHHHhhhc
Q 015283 395 CEYLADAIIDSYHNV 409 (410)
Q Consensus 395 i~~~~~~l~~~l~~~ 409 (410)
|+++++++.+++.++
T Consensus 460 Id~~l~al~~~l~~~ 474 (474)
T PLN02482 460 IDFTIAAAERVLARI 474 (474)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998753
No 251
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.78 E-value=3.1e-17 Score=157.85 Aligned_cols=276 Identities=16% Similarity=0.085 Sum_probs=163.9
Q ss_pred cCCceEEEecCChhhHHHHHHHHHHHhCCC---CEEEEcCCCCcchhh----hhhhCCCCc----cceeeecCCCcccCh
Q 015283 99 KEQRVATVQGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNHKN----IFNDARVPW----SEYRYYDPKTVGLDF 167 (410)
Q Consensus 99 ~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g---d~Vl~~~p~y~~~~~----~~~~~g~~~----~~v~~~~~~~~~~d~ 167 (410)
++++|++ ++|+|++++.++..+ +.+| +.|++....|+.... .++..|.++ +.++. .+.+.+|+
T Consensus 85 ~~~~v~~--~~~~t~~l~~~~~~~--~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~ 158 (406)
T TIGR01814 85 KEDEVVV--MNTLTINLHLLLASF--YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRL 158 (406)
T ss_pred CCCcEEE--eCCchHHHHHHHHHh--cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCH
Confidence 3789999 999999999974322 4554 367888889987433 345678876 23333 34456788
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+.+++.+....++++++++++++|.||...+ +++|.++|+++|+++++|++++ ++..+.+ ....+.+
T Consensus 159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~-~G~~~id---------~~~~gvD 225 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHA-VGNVPLD---------LHDWGVD 225 (406)
T ss_pred HHHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccc-cCCcccc---------cccCCCC
Confidence 9998888643357888888999999999665 6677778999999999999944 4422111 1123467
Q ss_pred EEEecccccc-cccCCCcceEEEEeCCchhHHHHHHHHHh---h---------------ccC-cccCCChhHHHHHHHHh
Q 015283 248 LVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKR---L---------------ARP-MYSNPPVHGARIVANVV 307 (410)
Q Consensus 248 i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~~~~~~---~---------------~~~-~~~~~~~~~~~~a~~~l 307 (410)
+++.|..|.+ |.|| |.+++ . . +..+.+...... . ... ..++++..+..++...|
T Consensus 226 ~~~~s~hK~l~g~pG---~~l~v-~-~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al 299 (406)
T TIGR01814 226 FACWCTYKYLNAGPG---AGAFV-H-E-KHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSL 299 (406)
T ss_pred EEEEcCccccCCCCC---eEEEE-e-h-hhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHH
Confidence 8899999987 3455 33322 2 2 212222111000 0 000 01123332322222222
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccC-----Ccceeee-cCCCHHH-HHHhhhcCcEEE
Q 015283 308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILR-----QIGMFSF-TGLNKAQ-SDNMTNKWHVYM 379 (410)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~-----~~~~~~~-~~~~~~~-~~~ll~~~gi~v 379 (410)
+-- . ...+++.+++.++..+++.+.|. +. +....+.+..+ .+++..+ .+.+.+. ...| .++||.+
T Consensus 300 ~~~---~--~~g~~~i~~~~~~l~~~l~~~l~-~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L-~~~gi~v 372 (406)
T TIGR01814 300 DIF---D--QAGMEALRKKSLLLTDYLEELIK-ARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQAL-IKRGVIG 372 (406)
T ss_pred HHH---H--hcCHHHHHHHHHHHHHHHHHHHH-hhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHH-HHCCEEE
Confidence 210 0 11246777888888888888887 54 20001222222 1223322 2233444 4455 4569988
Q ss_pred cCC--C--eEEec--CCCcccHHHHHHHHHHHh
Q 015283 380 TKD--G--RISLA--GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 380 ~~~--g--Ris~~--~~~~~~i~~~~~~l~~~l 406 (410)
... + |+|++ ..|++|++++++.|++++
T Consensus 373 ~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 373 DKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred eccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 643 2 99973 348999999999999875
No 252
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=6.8e-17 Score=154.93 Aligned_cols=159 Identities=16% Similarity=0.092 Sum_probs=117.1
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh----CCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----ARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~----~g~ 150 (410)
+.....+|++.++++... +..++ +++|++|+.++ +...+.+||+|+++.+.|++....+.. .|.
T Consensus 56 ~~pt~~~Le~~lA~l~g~--------~~~l~--~ssG~~Ai~~a--l~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi 123 (425)
T PRK06084 56 MNPTNDVLEQRVAALEGG--------VGALA--VASGMAAITYA--IQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGI 123 (425)
T ss_pred CCchHHHHHHHHHHHhCC--------CceeE--ehhHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHhccccee
Confidence 344567999999999532 23344 68999999988 444578999999999999865544432 344
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++. .|++.+++.+++ +++++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 124 ~v~~~d~-------~d~e~le~ai~~---~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~-- 188 (425)
T PRK06084 124 ETRFAAH-------DDIAALEALIDE---RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC-- 188 (425)
T ss_pred EEEEECC-------CCHHHHHHHhcc---CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 4444432 378999998875 5777788999999999776 577888899999999999998643321
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
. ++ ....++++.|++|.++.+|.++|.+++
T Consensus 189 --~--p~-----~~gaDivv~S~tK~l~G~g~~~gG~v~ 218 (425)
T PRK06084 189 --R--PF-----EHGADIVVHSLTKYIGGHGTSIGGIVV 218 (425)
T ss_pred --C--hh-----hcCCCEEEECchhcccccccceeEEEE
Confidence 1 11 123568999999999989999999744
No 253
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=1.3e-16 Score=152.01 Aligned_cols=153 Identities=19% Similarity=0.171 Sum_probs=116.3
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPW 152 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~ 152 (410)
.....|.+.++++.... ..+. +++|+.|+.++ +.+.+.+||+|+++.++|.+.... +...|+++
T Consensus 61 Ptv~~lE~~la~leg~~--------~av~--~~SG~aAi~~a--l~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v 128 (432)
T PRK06702 61 PTLAAFEQKLAELEGGV--------GAVA--TASGQAAIMLA--VLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV 128 (432)
T ss_pred cHHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEE
Confidence 45779999999996433 3444 79999999998 455578999999999999876665 56789888
Q ss_pred cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283 153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 232 (410)
Q Consensus 153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 232 (410)
..+.. .+|++.+++++++ ++++|++.+|+|||+.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 129 ~~vd~------~~d~~~l~~~I~~---~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~----- 191 (432)
T PRK06702 129 TFFNP------NLTADEIVALAND---KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL----- 191 (432)
T ss_pred EEECC------CCCHHHHHHhCCc---CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh-----
Confidence 77754 2588999999975 6778888899999999766 77888889999999999999742111
Q ss_pred chhHhHHHhhcCCcEEEEecccc-----cccccCCCc
Q 015283 233 DASSVRLFATRGMELLVAQSYSK-----NLGLYAERI 264 (410)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~S~sK-----~~~~~G~r~ 264 (410)
.+. . ...-+|++.|+|| ..+++|.++
T Consensus 192 ----~~p-l-~~GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 192 ----CQA-F-EHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred ----CCh-h-hcCCCEEEEccccccCCCcceeceEEE
Confidence 101 1 2235699999999 556666655
No 254
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.78 E-value=5.2e-17 Score=155.89 Aligned_cols=328 Identities=14% Similarity=0.081 Sum_probs=190.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|.--...|+. +|.+.+++.+++.. .+...|.......++.+.+++..... .+.+.+ +++|+
T Consensus 75 ~~ylD~~~g~~~~~lGh~--hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~SGs 144 (442)
T TIGR03372 75 NEFIDCLGGFGIFNVGHR--NPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGK------LKYSFF--CNSGT 144 (442)
T ss_pred CEEEECCccHHhhhcCCC--CHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCCch
Confidence 467888777322244554 58888888887754 22233433444456666666653221 256888 89999
Q ss_pred hHHHHHHHHHHHhC---CCCEEEEcCCCCcchhh-hhhhCCC------------CccceeeecCCCcccChhhHHHHHhc
Q 015283 113 GSLRLAAALIERYF---PGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 113 ~a~~~~~~~~~~~~---~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
+|++.+.++.+.+. ...+|+..+.+|.+... .+...+. .+..+|. .|.+.+++.+.+
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~~l~~ 217 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLKALNE 217 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHHHHHH
Confidence 99999998887764 33678888887766543 2222111 1112221 256777666642
Q ss_pred ---CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 177 ---APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 177 ---~~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
.+....++++...+...|...+ ++-++++.++|++||+++|+||++.+|+-. ...|....+ +..++++ +
T Consensus 218 ~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt---G~~~a~e~~-gv~PDiv---t 290 (442)
T TIGR03372 218 CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT---GKMFACEHE-GVQPDIL---C 290 (442)
T ss_pred HhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc---ccchhhhhc-CCCCCee---e
Confidence 2345666666666666777664 555999999999999999999999887632 233343332 2223444 5
Q ss_pred ccccccccC-CCcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHH
Q 015283 253 YSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 253 ~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
++|.+| .| +.+|.++. ++++.+.+.. .. ...+++. .+.++..++ ...++++ ...++.
T Consensus 291 ~gK~lg-~G~~Pigavv~---~~~i~~~~~~--~~~~~~~T~~-gnp~~~Aaa~a~L~~i~~~-----------~l~~~~ 352 (442)
T TIGR03372 291 LAKALG-GGVMPIGATIA---TEAVFSVLFD--NPFLHTTTFG-GNPLACAAALATINELLEK-----------NLPAQA 352 (442)
T ss_pred ehhhhc-CCcccceEEEe---cHHHHHhhhc--cCccccCCCC-CCHHHHHHHHHHHHHHHhc-----------cHHHHH
Confidence 899998 67 68898744 6675555421 11 1122332 233333333 3333332 223445
Q ss_pred HHHHHHHHHHhhhccCCCCC--cccccCCcceeeecCC--C---HHHHHHhhhcCcEEEcCC---C---eEEecC-CCcc
Q 015283 328 KNVRQKLFDSLSAKDKSGKD--WSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKD---G---RISLAG-LSLA 393 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~--~~~~~~~~~~~~~~~~--~---~~~~~~ll~~~gi~v~~~---g---Ris~~~-~~~~ 393 (410)
++..+++.+.|+ ++....+ +... ...|.+.-+.+ + ..+...+++ +||++.+. + ||..+. .|++
T Consensus 353 ~~~G~~l~~~L~-~l~~~~~~~i~~v-RG~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~~~~~lr~~Ppl~~t~~ 429 (442)
T TIGR03372 353 AIKGDFLLDGFQ-QLAAEYPDLIIEA-RGKGLLMAIEFRDNEIGYAFAKELFQ-QNILVAGTLNNAKSIRIEPPLTITIE 429 (442)
T ss_pred HHHHHHHHHHHH-HHHHhCCCceEEE-ecceEEEEEEeCChHHHHHHHHHHHH-CCcEEeecCCCCCEEEEECCcccCHH
Confidence 555555555555 4421110 1112 23344433333 1 223556655 69998653 2 776553 4999
Q ss_pred cHHHHHHHHHHHh
Q 015283 394 KCEYLADAIIDSY 406 (410)
Q Consensus 394 ~i~~~~~~l~~~l 406 (410)
++++++++|.+++
T Consensus 430 ~id~~~~~l~~~~ 442 (442)
T TIGR03372 430 QCALVIKAAKDAL 442 (442)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998874
No 255
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=1.9e-16 Score=149.63 Aligned_cols=166 Identities=14% Similarity=0.051 Sum_probs=121.7
Q ss_pred ccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCcc
Q 015283 78 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWS 153 (410)
Q Consensus 78 g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~ 153 (410)
....|++.++++... +++++ ++||++|+..+ +...+.+||+|++++|.|++.... ++..|.++.
T Consensus 51 t~~~lE~~lA~l~g~--------~~~~~--~~sG~~Ai~~a--l~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~ 118 (377)
T TIGR01324 51 THFALQDAMCELEGG--------AGCYL--YPSGLAAVTNS--ILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDIT 118 (377)
T ss_pred cHHHHHHHHHHHhCC--------CcEEE--ECcHHHHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEE
Confidence 346999999998532 45777 89999999998 455578999999999999876543 345676665
Q ss_pred ceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCc
Q 015283 154 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 233 (410)
Q Consensus 154 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 233 (410)
.++. . +.+.+++.+.+ +++++++++|+||||. ..++++|+++|+++|+++|+|++|...... .
T Consensus 119 ~~d~---~----~~e~l~~~i~~---~tklV~lesp~Np~g~---~~dl~~I~~la~~~g~~livD~t~a~g~~~----~ 181 (377)
T TIGR01324 119 YYDP---L----IGEDIATLIQP---NTKVLFLEAPSSITFE---IQDIPAIAKAARNPGIVIMIDNTWAAGLLF----K 181 (377)
T ss_pred EECC---C----CHHHHHHhcCC---CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccccc----C
Confidence 5532 1 22677777764 7888889999999988 788999999999999999999998653321 1
Q ss_pred hhHhHHHhhcCCcEEEEeccccccccc-CCCcceEEEEeCCchhHHHHHH
Q 015283 234 ASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
++ ..+.+++++|++|.++-+ +...|+++. +++.++++..
T Consensus 182 --pl-----~~gaDivv~S~tK~l~G~~d~~gG~v~~---~~~~~~~l~~ 221 (377)
T TIGR01324 182 --PL-----EHGVDISIQAGTKYLVGHSDIMIGTVVA---NARTWDQLRE 221 (377)
T ss_pred --cc-----ccCceEEEecCceeccCCCCceEEEEEe---CHHHHHHHHH
Confidence 11 224578999999999643 455676533 6666665553
No 256
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.78 E-value=3.8e-17 Score=154.62 Aligned_cols=280 Identities=17% Similarity=0.069 Sum_probs=172.9
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCcc
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWS 153 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 153 (410)
......++++.+++++.. +++++ +++|++++..++ ... +.+||+|+++.++|..+...+...|.+++
T Consensus 16 ~~~~~~~~~~~la~~~~~--------~~~~~--~~sgt~al~~~l--~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~ 83 (352)
T cd00616 16 LGPKVREFEKAFAEYLGV--------KYAVA--VSSGTAALHLAL--RALGIGPGDEVIVPSFTFVATANAILLLGATPV 83 (352)
T ss_pred CCHHHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHHH--HHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEE
Confidence 344678999999999632 35666 789999998873 333 46999999999999999989999999999
Q ss_pred ceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCc
Q 015283 154 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 233 (410)
Q Consensus 154 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 233 (410)
.++.. .+++.+|++.+++.+++ +++++++ .|++|... ++++|.++|+++|+++|+|+++...... .. .
T Consensus 84 ~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~~---~~~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~g~~~-~~-~ 151 (352)
T cd00616 84 FVDID-PDTYNIDPELIEAAITP---RTKAIIP---VHLYGNPA---DMDAIMAIAKRHGLPVIEDAAQALGATY-KG-R 151 (352)
T ss_pred EEecC-CCcCCcCHHHHHHhcCc---CCeEEEE---ECCCCCcC---CHHHHHHHHHHcCCeEEEECCCCCCCeE-CC-E
Confidence 99883 34678899999998854 5666664 36899865 4667777899999999999997643211 00 0
Q ss_pred hhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC--------c---ccCCChhHH
Q 015283 234 ASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP--------M---YSNPPVHGA 300 (410)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~ 300 (410)
. .+.. .++.+.|++ |.++ +.+.|++ ++.++++.+++.......... . ....+.+..
T Consensus 152 -----~-~~~~-~d~~~~S~~~~K~~~--~~~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 220 (352)
T cd00616 152 -----K-VGTF-GDAGAFSFHPTKNLT--TGEGGAV--VTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQA 220 (352)
T ss_pred -----E-cccC-cceeEEcCCCCCCCc--ccCceEE--EECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHH
Confidence 0 0111 245666766 8874 3345766 455667666654322111100 0 001222221
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC------Ccceeee-c----CCCHHHHH
Q 015283 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR------QIGMFSF-T----GLNKAQSD 369 (410)
Q Consensus 301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~------~~~~~~~-~----~~~~~~~~ 369 (410)
.++... .+.+++..++.+++.+++.+.|. .+.. +++..+ ....+.+ + +.+.+.+.
T Consensus 221 a~~~~~----------l~~~~~~~~~~~~~~~~~~~~L~-~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 286 (352)
T cd00616 221 AIGLAQ----------LEKLDEIIARRREIAERYKELLA-DLPG---IRLPDVPPGVKHSYHLYVIRLDPEAGESRDELI 286 (352)
T ss_pred HHHHHH----------HHhhHHHHHHHHHHHHHHHHHhc-CCCC---ccCCCCCCCCceeeEEEEEEECCcCCCCHHHHH
Confidence 111111 12235666777788888888888 6531 232221 1122222 2 23555554
Q ss_pred HhhhcCcEEEc----CC-------------------------C--eEEecC-CCcccHHHHHHHHH
Q 015283 370 NMTNKWHVYMT----KD-------------------------G--RISLAG-LSLAKCEYLADAII 403 (410)
Q Consensus 370 ~ll~~~gi~v~----~~-------------------------g--Ris~~~-~~~~~i~~~~~~l~ 403 (410)
+.|++.||.+. |. + |+++.. +|++|++.+++.|+
T Consensus 287 ~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 287 EALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 44555688653 10 1 555443 58999999998874
No 257
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=1.5e-16 Score=153.78 Aligned_cols=339 Identities=14% Similarity=0.117 Sum_probs=190.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc--cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.--...|+. +|.+.+++.+++...... .+.+.....++.+.+++...... .+.+.+ +++|
T Consensus 42 ~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~~v~f--~~SG 112 (445)
T PRK08593 42 KTYIDLLASASSQNVGHA--PPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDF-----EKRVTF--GLSG 112 (445)
T ss_pred CEEEECCccHHhhcCCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC-----CCEEEE--CCch
Confidence 467888776442345664 589999988887542111 11223333456666666532210 257889 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhCCC-------------CccceeeecCCC--cc-cC-------h
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV-------------PWSEYRYYDPKT--VG-LD-------F 167 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~g~-------------~~~~v~~~~~~~--~~-~d-------~ 167 (410)
++|++.+.++.+.+....+|+..+.+|.+... .+...+. .+..+|..+... +. .+ +
T Consensus 113 seA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 192 (445)
T PRK08593 113 SDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYL 192 (445)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHH
Confidence 99999998888776555678888877766532 2211110 122233211100 00 01 2
Q ss_pred hhHHHHHhcC--CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 168 EGMIADIKAA--PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 168 ~~l~~~i~~~--~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
+.+++.+.+. ++...++++...++..|.. ++.+.++++.++|++||+++|.||++.+|+.. ...+....+ +..
T Consensus 193 ~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Grt---G~~~a~~~~-gv~ 268 (445)
T PRK08593 193 APLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRT---GKWSSISHF-NIT 268 (445)
T ss_pred HHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---chHHHHHhc-CCC
Confidence 3344444321 2456777767778778887 56777999999999999999999999888632 222222222 222
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHh---CChhhHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEME 321 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~ 321 (410)
++++ +++|.++ .|+++|+++. ++++.+.+.. .....+...+.+++.++...| +++
T Consensus 269 pDi~---t~gK~l~-~G~p~gav~~---~~~i~~~~~~----~~~~~T~~~~pl~~aaa~a~l~~l~~~----------- 326 (445)
T PRK08593 269 PDLM---SFGKSLA-GGMPMSAIVG---RKEIMESLEA----PAHLFTTGANPVSCAAALATIDMIEDE----------- 326 (445)
T ss_pred CCEe---eeccccc-CCcccEEEEE---cHHHHhhhcc----CCCCCCCCCCHHHHHHHHHHHHHHHhc-----------
Confidence 3433 7899998 6899999755 7775555421 111112233344444443333 222
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCC-C---e
Q 015283 322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKD-G---R 384 (410)
Q Consensus 322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~-g---R 384 (410)
...++.+++.+++.+.|+ ++....++.......|.+.-+.+ + ..+..++++ +||++.+. + |
T Consensus 327 ~l~~~~~~~g~~l~~~L~-~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~~~lr 404 (445)
T PRK08593 327 SLLQRSAEKGEYARKRFD-QWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIAVAGNVLR 404 (445)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEeccCCCEEE
Confidence 233444445555555554 33110111111122233221111 1 123445555 69999764 2 7
Q ss_pred EEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 385 ISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 385 is~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
|+.+. .|+++++++++++.+++.++
T Consensus 405 ~~p~l~~t~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 405 FQPPLVITYEQLDTALNTIEQAFTAL 430 (445)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHH
Confidence 76553 49999999999999998653
No 258
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.78 E-value=5.1e-17 Score=154.50 Aligned_cols=216 Identities=13% Similarity=0.050 Sum_probs=141.2
Q ss_pred ceEEEecCChhh-HHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceee-ecCCCcccChhhHHHHHhcCC
Q 015283 102 RVATVQGLSGTG-SLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRY-YDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 102 ~i~~~~t~ggt~-a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~ 178 (410)
..++ +++||+ ++.++...++... +||.|+++.-+|.+....+...|++++.++. .+++++.+|++.+++++++..
T Consensus 125 ~a~~--v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~ 202 (444)
T TIGR03531 125 SAFV--VPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIG 202 (444)
T ss_pred EEEE--ECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhcc
Confidence 4555 688995 6665522221112 5899999999999999999999999999986 356789999999999998533
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH-HHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~S~sK~~ 257 (410)
++..++++++|+ |+...+.+++++|+++|++||+++|+|++|...... ...+. .....+.-++++.|++|.+
T Consensus 203 ~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~-----~~~~~~~g~~~Grad~vv~s~hK~l 275 (444)
T TIGR03531 203 PDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK-----YMELINKAIKVGRVDAVVSSTDKNF 275 (444)
T ss_pred CCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh-----hhhhhhccccccCCCeEEEeCccCC
Confidence 245555555554 555556899999999999999999999998753311 00100 0011112367788999999
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
..||+ |+++ .+.++++.+++..... . ...+...+.+...++.-+ .+.+++..++..++++++.+.
T Consensus 276 ~~pg~--Gg~I-~~~d~el~~~i~~~y~----g--~~~~s~~~~~~~~ll~~G------~~g~~~li~~~~~~a~~l~~~ 340 (444)
T TIGR03531 276 MVPVG--GAII-YSFDENFIQEISKSYP----G--RASASPSLDVLITLLSLG------SKGYLELLKERKEMYKYLKEL 340 (444)
T ss_pred CCCCC--EEEE-EECCHHHHHHHHHhcc----C--CCCChHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHH
Confidence 88887 6663 3667776665543211 1 112233455544444322 234456666667777777776
Q ss_pred hhhcc
Q 015283 338 LSAKD 342 (410)
Q Consensus 338 l~~~~ 342 (410)
|. ++
T Consensus 341 L~-~l 344 (444)
T TIGR03531 341 LQ-KL 344 (444)
T ss_pred HH-HH
Confidence 66 54
No 259
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=5.1e-17 Score=157.97 Aligned_cols=328 Identities=13% Similarity=0.107 Sum_probs=188.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC---Ccc------cHH-HHHHHHHHhcCCCCCcccCCce
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP---IEG------LAA-FNKVTAELLFGADNSVLKEQRV 103 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g------~~~-lr~aia~~~~~~~~~~~~~~~i 103 (410)
...|+|..+++ . ++|.+++++...+...+...++. ..| +++ .|+.+++++... ++++
T Consensus 34 ~~~l~l~~sen------~-~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~------~~~~ 100 (452)
T PTZ00094 34 IEGLELIASEN------F-TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLD------PEEW 100 (452)
T ss_pred HcCeeEecccc------c-CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCC------cccc
Confidence 46789987764 2 37889998876653322111211 112 222 455777776443 4555
Q ss_pred EE-EecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC--------C--CCccceeeecCCCcccChhhHHH
Q 015283 104 AT-VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA--------R--VPWSEYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 104 ~~-~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~--------g--~~~~~v~~~~~~~~~~d~~~l~~ 172 (410)
.+ +++++|++++.+++ ...+.+||+|++....++.+...+... + .++..+++ ..++.+|++++++
T Consensus 101 ~~~~~~~sgt~an~~v~--~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~--~~~g~id~~~L~~ 176 (452)
T PTZ00094 101 GVNVQPYSGSPANFAVY--TALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQV--NEKGLIDYDKLEE 176 (452)
T ss_pred eeecCCCchHHHHHHHH--HHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeeccc--CCCCCcCHHHHHH
Confidence 44 22378998888873 344779999999888877765443211 1 12223333 2246799999999
Q ss_pred HHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 173 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 173 ~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
.+++. ++.+++++ ++.+|...+ +++|.++|+++|+++++|+++...... .+....+ ..+.+++++|
T Consensus 177 ~l~~~--~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~-~~~~~~~------~~~~D~l~~S 242 (452)
T PTZ00094 177 LAKAF--RPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVA-AGVLPSP------FPYADVVTTT 242 (452)
T ss_pred HHHHh--CCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhcccc-CCCCCCC------CCCCcEEEcC
Confidence 99652 23344432 345898555 556666799999999999995432221 1111111 1136788999
Q ss_pred ccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 253 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
.+|+++ |.+.|++++ +++..+.+.........+.+. ++......++...++.- .....+++++++.+++
T Consensus 243 ~hK~l~--GP~Gg~l~~---~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~-----~~~~~~~~~~~i~~l~ 312 (452)
T PTZ00094 243 THKSLR--GPRSGLIFY---RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEV-----QSPEWKEYAKQVLKNA 312 (452)
T ss_pred CccCCC--CCCceEEEE---ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHH-----hChhHHHHHHHHHHHH
Confidence 999873 233377643 444444444433322222222 22222222222222211 0123457788899999
Q ss_pred HHHHHHhhhccCCCCCcccccCCc-ceeeec-----CCCHHHHHHhhhcCcEEEcC------------CC-eEEecCC--
Q 015283 332 QKLFDSLSAKDKSGKDWSFILRQI-GMFSFT-----GLNKAQSDNMTNKWHVYMTK------------DG-RISLAGL-- 390 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~ll~~~gi~v~~------------~g-Ris~~~~-- 390 (410)
+++.+.|+ +.|. .+..+.. .....+ +.+...+..+|+++||.+.. ++ |+++..+
T Consensus 313 ~~l~~~L~-~~g~----~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt 387 (452)
T PTZ00094 313 KALAAALE-KRGY----DLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTT 387 (452)
T ss_pred HHHHHHHH-hCCc----EEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHh
Confidence 99999998 7663 3322111 111121 33566677777878999942 22 8886432
Q ss_pred ---CcccHHHHHHHHHHHhh
Q 015283 391 ---SLAKCEYLADAIIDSYH 407 (410)
Q Consensus 391 ---~~~~i~~~~~~l~~~l~ 407 (410)
+++|++++++.|++++.
T Consensus 388 ~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 388 RGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 48999999999999886
No 260
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=9.5e-17 Score=155.14 Aligned_cols=339 Identities=14% Similarity=0.066 Sum_probs=193.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|.--...|+. +|.+.+++.+++... +...|.+.....++.+.+++..... .+.+.+ +++|+
T Consensus 82 ~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SGs 151 (459)
T PRK11522 82 QEFIDCLGGFGIFNVGHR--NPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGK------LKYSFF--CNSGT 151 (459)
T ss_pred CEEEECCcCHHhhhcCCC--CHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCch
Confidence 456787776332244554 588999988887542 2122333334445666666553221 357888 99999
Q ss_pred hHHHHHHHHHHHhCC--C-CEEEEcCCCCcchhhh-hhhCCCCcc---ceeeecC--CCcccChhhHHHHHhc---CCCC
Q 015283 113 GSLRLAAALIERYFP--G-AKVLISSPTWGNHKNI-FNDARVPWS---EYRYYDP--KTVGLDFEGMIADIKA---APGG 180 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~--g-d~Vl~~~p~y~~~~~~-~~~~g~~~~---~v~~~~~--~~~~~d~~~l~~~i~~---~~~~ 180 (410)
+|++.+.++.+.+.. | .+|+....+|.+.... +...+.... ..|..+. .-.-.|.+.+++.+.. .++.
T Consensus 152 EAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 231 (459)
T PRK11522 152 ESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDD 231 (459)
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCc
Confidence 999999988877653 3 4688888777665432 222221100 0111000 0001266777777753 2234
Q ss_pred cEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
..++++...+.-.|...+ ..-++++.++|++||+++|+||++.+|+-. ...+....+ +..++++ +++|.+|
T Consensus 232 iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt---G~~~a~e~~-gv~PDiv---t~gK~lg- 303 (459)
T PRK11522 232 VAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT---GKMFACEHE-NVQPDIL---CLAKALG- 303 (459)
T ss_pred EEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc---chhhhhhcc-CCCCCEE---Eechhhh-
Confidence 566666666666777654 555999999999999999999998877532 233333222 2223433 7899998
Q ss_pred cC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 260 YA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 260 ~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
.| +.+|.+++ .+++.+.+... .....+++. .+.++..++ ...+.++ ...++.+++.+++.
T Consensus 304 gG~~Pigav~~---~~~i~~~~~~~-~~~~~~T~~-gnp~~~Aaala~L~~i~~~-----------~l~~~~~~~g~~l~ 367 (459)
T PRK11522 304 GGVMPIGATIA---TEEVFSVLFDN-PFLHTTTFG-GNPLACAAALATINVLLEQ-----------NLPAQAEQKGDYLL 367 (459)
T ss_pred CCCccceeEEE---cHHHHHHhccC-CcccCCCCC-CCHHHHHHHHHHHHHHhcc-----------hHHHHHHHHHHHHH
Confidence 57 68899754 56654443211 001122222 233333333 3333332 34456666667777
Q ss_pred HHhhhccCCCCC--cccccCCcceeeecCC--C---HHHHHHhhhcCcEEEcCC---C---eEEecC-CCcccHHHHHHH
Q 015283 336 DSLSAKDKSGKD--WSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKD---G---RISLAG-LSLAKCEYLADA 401 (410)
Q Consensus 336 ~~l~~~~g~~~~--~~~~~~~~~~~~~~~~--~---~~~~~~ll~~~gi~v~~~---g---Ris~~~-~~~~~i~~~~~~ 401 (410)
+.|+ ++....+ +..+. ..|.+.-+.+ + ..+...+++ +||.+.+. + ||..+. .+++++++++++
T Consensus 368 ~~L~-~l~~~~~~~i~~Vr-G~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~ 444 (459)
T PRK11522 368 DGFR-QLAREYPDLVQEAR-GKGMLMAIEFVDNEIGYNFASEMFR-QRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKA 444 (459)
T ss_pred HHHH-HHHHhCCCceeeEE-eceeEEEEEecCchHHHHHHHHHHH-CCeEEEecCCCCCEEEEECCccCCHHHHHHHHHH
Confidence 7666 5531110 11122 2344433322 1 233455555 69998764 2 776543 599999999999
Q ss_pred HHHHhhhc
Q 015283 402 IIDSYHNV 409 (410)
Q Consensus 402 l~~~l~~~ 409 (410)
|.+++.++
T Consensus 445 l~~~l~~~ 452 (459)
T PRK11522 445 ARKALAAM 452 (459)
T ss_pred HHHHHHHH
Confidence 99988653
No 261
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.77 E-value=2.6e-16 Score=152.29 Aligned_cols=341 Identities=12% Similarity=0.041 Sum_probs=186.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-Cc-cCcCCcccHHHHHHHHHHhcCCCCCcccCCc-eEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~-~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~-i~~~~t~g 110 (410)
...||+..|..-...|+. +|.+.+++.+++.... .+ .+.+.....++.+.+++...... .... +.+ +++
T Consensus 39 ~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~----~~~~~~f~--~~s 110 (442)
T TIGR00709 39 KEYLDFLAGAGTLALGHN--HPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRK----MDYKLQFP--GPS 110 (442)
T ss_pred CEEEEccccHhhhcCCCC--CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcC----CCccEEEe--CCC
Confidence 568899888653455665 5889999888875421 11 12233333455555555532110 0123 444 689
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCC-------C-----CccceeeecCCC--cc----cChh---
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR-------V-----PWSEYRYYDPKT--VG----LDFE--- 168 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g-------~-----~~~~v~~~~~~~--~~----~d~~--- 168 (410)
|++|++.+.++.+.+....+|+....+|.+...... ..| . .+..++..+... +. .+.+
T Consensus 111 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (442)
T TIGR00709 111 GADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASI 190 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHH
Confidence 999999999888877655789888888876643322 111 0 112222211000 00 0111
Q ss_pred -hHHHHHh---cCCCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283 169 -GMIADIK---AAPGGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243 (410)
Q Consensus 169 -~l~~~i~---~~~~~~~~ii~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 243 (410)
.+++.+. ...+....+++.+.++..| ..+|.+.++++.++|++||+++|.||++.+|+.. ...+....+ +.
T Consensus 191 ~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~a~~~~-gv 266 (442)
T TIGR00709 191 EYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRS---GTMFAFEHA-GI 266 (442)
T ss_pred HHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC---CchhHHHHc-CC
Confidence 1233332 1112344444444444445 4578888999999999999999999999999743 234443332 23
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
.+++++ +||.++. |+++|++++ +++ .+.+. ...... +.+.+.+++.++...|+.- . + +..
T Consensus 267 ~PDiv~---~gK~l~~-G~Pigav~~---~~~-~~~~~---~~~~~~-T~~gnpla~aaa~a~L~~i--~----~--~~l 326 (442)
T TIGR00709 267 EPDFVV---MSKAVGG-GLPLAVLLI---APE-FDAWQ---PAGHTG-TFRGNQLAMVTGTEALNYW--K----D--DNL 326 (442)
T ss_pred CCcEEE---EcccccC-CcccEEEEE---chH-HhccC---CCcCCC-CCCcCHHHHHHHHHHHHHH--H----h--cCH
Confidence 334443 8999995 899999854 555 33321 111222 3345555555554444311 0 0 133
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C----------------H-HHHHHhhhcCcEEEcCC--
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N----------------K-AQSDNMTNKWHVYMTKD-- 382 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~----------------~-~~~~~ll~~~gi~v~~~-- 382 (410)
.++++++.+++.+.|+ ++....++.......|.+.-+.+ + . .+...++ ++|+.+.+.
T Consensus 327 ~~~~~~~g~~l~~~L~-~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~ 404 (442)
T TIGR00709 327 AQNAQERGERITSFLD-DMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGGR 404 (442)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecCC
Confidence 3455555555555555 43111111111222233322111 0 1 1233444 469998764
Q ss_pred -C---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 383 -G---RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 383 -g---Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
+ ||..+. +|+++++++++++.+++.+
T Consensus 405 ~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 405 EGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 766543 4999999999999998865
No 262
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.77 E-value=2.5e-16 Score=147.75 Aligned_cols=319 Identities=13% Similarity=0.100 Sum_probs=197.4
Q ss_pred HHHHHH-HHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283 55 DVVKKA-ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 133 (410)
Q Consensus 55 ~~v~~a-~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~ 133 (410)
..+.++ +..+... +..|.......+|.+++++++.. +++++ +++|+.|++++. ...+.|||.|
T Consensus 50 ~aMs~~q~a~~~~G--De~yag~~s~~~lE~~va~~~G~--------~~av~--v~sGT~Al~ll~--~l~l~pGDeV-- 113 (450)
T TIGR02618 50 NAMSDKQWAGLMMG--DEAYAGSRNFYHLERTVRELYGF--------KYVVP--THQGRGAENLLS--QIAIKPGDYV-- 113 (450)
T ss_pred HHHHHHHHHHhhhc--chhhcCCCcHHHHHHHHHHHHCC--------CeEEE--cCCHHHHHHHHH--HhCCCCcCEE--
Confidence 455555 4444333 24688888899999999999633 46777 899999999863 3346799977
Q ss_pred cCCCC-cchhhhhhhCCCCccceeee--------cCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCC-CCCCCCHHHH
Q 015283 134 SSPTW-GNHKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNP-TGIDPTPEQW 202 (410)
Q Consensus 134 ~~p~y-~~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NP-tG~~~~~~~l 202 (410)
+.++| ..+...++..|+..+.++.. .+.++.+|++.+++.+++.. .++.++...+++|- .|+++|.+++
T Consensus 114 psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l 193 (450)
T TIGR02618 114 PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANM 193 (450)
T ss_pred CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHH
Confidence 66766 44455578888866666432 13457899999999998631 12334444556675 5899999999
Q ss_pred HHHHHHHHHcCCcccccccCCC-CCC-------CCCCCchhHh-HHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 203 EKIADVIQEKNHIPFFDVAYQG-FAS-------GSLDNDASSV-RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 203 ~~i~~~~~~~~~~li~Deay~~-~~~-------~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
+++.++|++||+.|++|.+... .++ +-.+.+.+-+ +..... .+...+|..|..+.+ +|.++ .+++
T Consensus 194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~--aD~~~~S~~Kd~~~~---~GG~l-~~~d 267 (450)
T TIGR02618 194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSY--ADGCTMSGKKDCLVN---IGGFL-CMND 267 (450)
T ss_pred HHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhcc--CcEEEEeeccCCCCC---CceEE-EeCC
Confidence 9999999999999999999643 111 0011112111 121222 344778999987654 34442 4578
Q ss_pred chhHHHHHHHHHhhccC-cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 274 SDLAARVKSQLKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++++.....+-.. ++...+.....+++..|.+. . . +.+.++-....++|.+.|. +.|+ .+..
T Consensus 268 ~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~-~----~---~~y~~~r~~~a~~La~~L~-~~Gv----pv~~ 334 (450)
T TIGR02618 268 DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREA-V----D---YEYIEHRVKQVRYLGDKLK-AAGV----PIVE 334 (450)
T ss_pred HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHh-h----h---HHHHHHHHHHHHHHHHHHH-HCCC----cccC
Confidence 89888876654322111 11121222222223233321 1 0 1222233335677888888 7874 5555
Q ss_pred CCcceeeecCC-------------CHHHHHHhhhcCcEEEcCC-----------C----------eEEecC--CCcccHH
Q 015283 353 RQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKD-----------G----------RISLAG--LSLAKCE 396 (410)
Q Consensus 353 ~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~-----------g----------Ris~~~--~~~~~i~ 396 (410)
|.+|.-+|++. ...++.+|..+.||-..-- | |++++. .|.+.++
T Consensus 335 p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~ 414 (450)
T TIGR02618 335 PVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMD 414 (450)
T ss_pred CCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHH
Confidence 66676676632 1235667777777754321 1 888764 4889999
Q ss_pred HHHHHHHHHhhh
Q 015283 397 YLADAIIDSYHN 408 (410)
Q Consensus 397 ~~~~~l~~~l~~ 408 (410)
.++++|.++.++
T Consensus 415 ~v~~~~~~~~~~ 426 (450)
T TIGR02618 415 VVADGIIKLYKH 426 (450)
T ss_pred HHHHHHHHHHhh
Confidence 999999988764
No 263
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1.8e-16 Score=149.42 Aligned_cols=210 Identities=10% Similarity=0.024 Sum_probs=137.2
Q ss_pred HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCccce
Q 015283 80 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEY 155 (410)
Q Consensus 80 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v 155 (410)
..+++.++..-.. +..+++ ++|++|+..+ +++.+.+||+|++++|.|+++.. .++..|.++..+
T Consensus 67 ~~Le~~la~le~~-------~~~v~~---sSG~aAi~~~--l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~v 134 (395)
T PRK05967 67 DALCKAIDALEGS-------AGTILV---PSGLAAVTVP--FLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYY 134 (395)
T ss_pred HHHHHHHHHHhCC-------CCEEEE---CcHHHHHHHH--HHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEe
Confidence 3566666665321 345555 6789999988 55668899999999999999865 446778877776
Q ss_pred eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283 156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 235 (410)
Q Consensus 156 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~ 235 (410)
+. . +.+.+++.+++ +++++++++|+||++. ..++++|+++|+++|+++|+|++|....+- .
T Consensus 135 d~---~----~~e~l~~al~~---~TklV~lesPsNP~l~---v~dl~~I~~la~~~g~~vvVD~t~a~p~~~----~-- 195 (395)
T PRK05967 135 DP---E----IGAGIAKLMRP---NTKVVHTEAPGSNTFE---MQDIPAIAEAAHRHGAIVMMDNTWATPLYF----R-- 195 (395)
T ss_pred CC---C----CHHHHHHhcCc---CceEEEEECCCCCCCc---HHHHHHHHHHHHHhCCEEEEECCccCceec----C--
Confidence 43 1 34678888865 6888999999999876 889999999999999999999998764421 1
Q ss_pred HhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHH
Q 015283 236 SVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD 314 (410)
Q Consensus 236 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 314 (410)
++ ..+.++++.|.+|.++- .+.-.|++ +.+++..+++..... ......+......+.+-|+.-
T Consensus 196 pl-----~~GaDivv~S~tKy~~Gh~d~~~G~v---~~~~~~~~~l~~~~~----~~G~~~~p~da~l~~rgl~Tl---- 259 (395)
T PRK05967 196 PL-----DFGVDISIHAATKYPSGHSDILLGTV---SANEKCWPQLLEAHG----TLGLCAGPDDTYQILRGLRTM---- 259 (395)
T ss_pred hh-----HcCCCEEEEecccccCCCCCeeEEEE---EcCHHHHHHHHHHHH----HcCCCCCHHHHHHHHcCcccH----
Confidence 11 12356899999999742 33445654 336665555543222 112233333333333333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 315 EWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
....++..++...+.+.|+ +.+
T Consensus 260 ------~lR~~~~~~na~~lA~~L~-~hp 281 (395)
T PRK05967 260 ------GIRLEHHRKSALEIARWLE-GRP 281 (395)
T ss_pred ------HHHHHHHHHHHHHHHHHHH-hCC
Confidence 2333444555666666676 554
No 264
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.77 E-value=1.8e-16 Score=136.58 Aligned_cols=320 Identities=14% Similarity=0.111 Sum_probs=202.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
..+||.+-.. . .+..++++++.++... +..|+......+|.+..|+.+.+ |.-+| +.+||.+
T Consensus 22 ~~vDLRSDTv----T--~PTdeMr~am~eA~vg--DdVyGeD~tt~rLE~~vA~l~GK--------EAgLF--v~SGTmg 83 (384)
T KOG1368|consen 22 RSVDLRSDTV----T--VPTDEMRRAMAEASVG--DDVYGEDPTTNRLEQRVAELFGK--------EAGLF--VPSGTMG 83 (384)
T ss_pred eccccccccc----c--CChHHHHHHHhhcccC--cccccCCccHHHHHHHHHHHhCc--------cceee--ecccccc
Confidence 4677775543 3 3358888988887654 46677777788999999999533 44555 5777777
Q ss_pred HHHHHHHHHHhC-CCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcC-----CCCcEEEE
Q 015283 115 LRLAAALIERYF-PGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-----PGGSFILL 185 (410)
Q Consensus 115 ~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~~~~ii 185 (410)
+.++ +..++. +|.+|++-+-++.-..+ +....|..++. +.+++++.+|++++++.+... .+.+.++.
T Consensus 84 Nlla--Im~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~t--v~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIc 159 (384)
T KOG1368|consen 84 NLLA--IMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRT--VKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLIC 159 (384)
T ss_pred cHHH--HHHHhcCCCceEEeccchheeehhccChhhhccceeEe--eeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEE
Confidence 7776 456677 99999997765532211 11123444444 445777889999999998752 35688888
Q ss_pred eCCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283 186 HGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 186 ~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 264 (410)
+-|.+|-+| .++|.+++.++.++|+++|+.+..|.+.-+-..- ....++..+....+.+-. -+||.+|.| +
T Consensus 160 lENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAav---asgV~vk~i~~~fDSVsi--CLSKglgAP---V 231 (384)
T KOG1368|consen 160 LENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAV---ASGVPVKKICSAFDSVSI--CLSKGLGAP---V 231 (384)
T ss_pred eeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHH---HcCCCHHHHHHhhhhhhh--hhhccCCCC---c
Confidence 888877776 9999999999999999999999999995433211 111244444444433322 378988754 7
Q ss_pred ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH--HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI--VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
|.+ +.++++.+++.+- +++.. ..+.-..+..+ +...|.+ .+ . ..+.-.++...+.+.+. ..
T Consensus 232 GSV--iVG~k~FI~kA~~-~RKal---GGGmRQsGvLaaaaLval~~-~~--------~-~L~~dHk~A~~lAe~~~-~~ 294 (384)
T KOG1368|consen 232 GSV--IVGSKDFIDKARH-FRKAL---GGGMRQSGVLAAAALVALDE-NV--------P-LLRADHKRAKELAEYIN-TP 294 (384)
T ss_pred ccE--EEccHHHHHHHHH-HHHHh---cCchhHHHHHHHHHHHHhhc-ch--------H-HHHHHHHHHHHHHHHhc-cc
Confidence 987 6678886655433 22221 12222222222 2333332 21 1 22233345555666665 55
Q ss_pred CCCCCcccccC-Ccceeee-----cCCCHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHH
Q 015283 343 KSGKDWSFILR-QIGMFSF-----TGLNKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIID 404 (410)
Q Consensus 343 g~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~ 404 (410)
+. +....+ ....++. .+++.+.+.+.+++.||.+.++. ||.+.. +|+++++.+...+++
T Consensus 295 ~~---i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 295 EE---IRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred cc---eeeecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHH
Confidence 41 233333 2334444 35577776666677899999875 777665 699999999999943
No 265
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.77 E-value=1e-16 Score=146.91 Aligned_cols=201 Identities=15% Similarity=0.090 Sum_probs=150.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
.+.+.|-.+. +++++++|.+++...+.. ++...|. ...+.++.|+.+|++++.. +++|+|
T Consensus 42 ~~~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd------~~dIiF-- 107 (428)
T KOG1549|consen 42 TRPVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD------PSDIVF-- 107 (428)
T ss_pred CccEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC------CCcEEE--
Confidence 3556665554 466789999998877633 2212132 3445889999999998765 566999
Q ss_pred cCChhhHHHHHHHHHHHhCCCC----EEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283 108 GLSGTGSLRLAAALIERYFPGA----KVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd----~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 180 (410)
|+|+|++++++..-. .+..+| +|++....|+.....+ +.-|..+..+|.. +++-.|++.+++.+++ +
T Consensus 108 ts~ATEs~Nlvl~~v-~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~---~ 181 (428)
T KOG1549|consen 108 TSGATESNNLVLKGV-ARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRS---K 181 (428)
T ss_pred eCCchHHHHHHHHHh-hccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCC---C
Confidence 999999999984322 233566 9999998887765544 4678899999983 6677899999999986 8
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 260 (410)
++++.+...+|-+|++.| +++|+++|+++++.+++|.+ +..+--+.+ ..+.+-+++..|.+|.+|++
T Consensus 182 T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaA-QavG~i~vD---------V~eln~D~~s~s~HK~ygp~ 248 (428)
T KOG1549|consen 182 TRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAA-QAVGKIPVD---------VQELNADFLSISAHKIYGPP 248 (428)
T ss_pred ceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehh-hhcCCcccc---------HHHcCchheeeecccccCCC
Confidence 999999999999999665 55777789999999999999 544421111 23445677888999999999
Q ss_pred CCCcceEEE
Q 015283 261 AERIGAMNV 269 (410)
Q Consensus 261 G~r~G~l~~ 269 (410)
| +|++++
T Consensus 249 ~--iGaLYv 255 (428)
T KOG1549|consen 249 G--IGALYV 255 (428)
T ss_pred c--ceEEEE
Confidence 9 799976
No 266
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.76 E-value=2.4e-16 Score=151.97 Aligned_cols=338 Identities=15% Similarity=0.104 Sum_probs=192.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|..-...|+. .|.+.+++.+++.......+ +.....++.+.+++.... .+.+.+ +++|++
T Consensus 53 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~l~~~~p~-------~~~v~f--~~sGse 120 (428)
T PRK12389 53 NKYIDYLAAYGPIITGHA--HPHITKAITEAAENGVLYGT-PTELEIEFAKMLKEAIPS-------LEKVRF--VNSGTE 120 (428)
T ss_pred CEEEEccccccccccCCC--CHHHHHHHHHHHHhCCccCC-CCHHHHHHHHHHHHhCCC-------CcEEEE--eCCHHH
Confidence 567898877543345554 58899998888765331222 333334555555554321 367888 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCCCcc--------ceeee-cCCC---cccChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS--------EYRYY-DPKT---VGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~--------~v~~~-~~~~---~~~d~~~l~~~i~~~~~~ 180 (410)
|++.+.++.+.+....+|+...-+|.+.... +...|.... .++.. ..+. .-.|++.+++.+.+.++.
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE 200 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence 9999998887776557888888888765432 222221100 00000 0000 012678888888754445
Q ss_pred cEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
..++++...+.-.|... +..-+++|.++|++||+++|.||++.+|..+ . .+.. ...+..++++ +++|.++
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~-~---~~a~-~~~gv~PDiv---t~gK~lg- 271 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM-Y---GGAQ-DLLGVEPDLT---ALGKIIG- 271 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC-c---chhh-HHhCCCCCee---eechhhc-
Confidence 66666666677778766 4555999999999999999999999887421 1 1111 1112223443 7899998
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
.|+.+|.+++ ++++.+.+...-.....+++. +|...+...+ ...|.+++ ..++++++.+++.+.
T Consensus 272 gG~Pi~av~~---~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~-----------l~~~~~~~g~~l~~~ 337 (428)
T PRK12389 272 GGLPIGAYGG---RKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEG-----------VYEKLDRLGAMLEEG 337 (428)
T ss_pred CCCceeEEeE---HHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhccc-----------HHHHHHHHHHHHHHH
Confidence 6899999744 777555543110111223333 3333322222 33343332 334455555555555
Q ss_pred hhhccCCCCCcc-cccCCcceee-ec-C--C---------C----HHHHHHhhhcCcEEEcCCC----eEEecCCCcccH
Q 015283 338 LSAKDKSGKDWS-FILRQIGMFS-FT-G--L---------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSLAKC 395 (410)
Q Consensus 338 l~~~~g~~~~~~-~~~~~~~~~~-~~-~--~---------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~i 395 (410)
|+ ++....++. ......+++. .+ . . + ..+...+++ +||++.+.+ .+++. .+++++
T Consensus 338 L~-~l~~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~~~l~-~t~e~i 414 (428)
T PRK12389 338 IL-EAAEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLN-QGINLAPSKYEAWFLTTA-HTEEDI 414 (428)
T ss_pred HH-HHHHhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHH-CCcEeecCCCCCeeecCC-CCHHHH
Confidence 54 321000011 1112233331 11 1 0 1 123445554 699998864 33433 499999
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
+++++++++++.++
T Consensus 415 d~~~~~l~~~l~~~ 428 (428)
T PRK12389 415 EETLEAVDRAFAQL 428 (428)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998753
No 267
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.76 E-value=1.1e-16 Score=152.45 Aligned_cols=330 Identities=15% Similarity=0.080 Sum_probs=190.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc------CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
..-|+|-.+++ ++++.+++++...+.+....+ |.....++++.....+...+.++... -+| +
T Consensus 49 ~~~l~LiasEN-------~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~--anv---q 116 (493)
T PRK13580 49 RSSLKLIASEN-------YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH--AYV---Q 116 (493)
T ss_pred hcCceEecccc-------cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc--ccc---c
Confidence 35688887764 237899988766553322222 33333444444444444444444322 233 3
Q ss_pred cCChhhHHHHHHHHHHHhCC-------------------------------CCEEEEcCCCCcchhhhhh---hCC--CC
Q 015283 108 GLSGTGSLRLAAALIERYFP-------------------------------GAKVLISSPTWGNHKNIFN---DAR--VP 151 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~-------------------------------gd~Vl~~~p~y~~~~~~~~---~~g--~~ 151 (410)
..+|+.|+..+ +.+.+.| ||+|+..++..+++...-. ..| .+
T Consensus 117 p~Sg~~An~~v--~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~ 194 (493)
T PRK13580 117 PHSGADANLVA--FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFH 194 (493)
T ss_pred CCCcHHHHHHH--HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheee
Confidence 57888888887 4444554 8999999877766633211 122 34
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
.+.+++. .+++.+|++.+++.+.+ .+..++++..+|- |... ++++|.++|+++|+++++|+++.....+ .+
T Consensus 195 ~~~y~vd-~~~g~iD~d~l~~~~~~---~~plvii~g~S~~-~~~~---dl~~i~eia~~~gA~L~VD~AH~~Glig-g~ 265 (493)
T PRK13580 195 QRSYGVD-PDTGLLDYDEIAALARE---FKPLILVAGYSAY-PRRV---NFAKLREIADEVGAVLMVDMAHFAGLVA-GK 265 (493)
T ss_pred eEecccC-cccCccCHHHHHHHHhh---cCCEEEEeCcccc-CCCc---CHHHHHHHHHHcCCEEEEECchhhceec-cc
Confidence 4455553 34567999999999986 3334444556555 4444 5667777799999999999996543322 11
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~ 311 (410)
... .......+.+++++|++|++. |-+.|++++ ++++++.+ .......++++......+++..+..
T Consensus 266 ~~~---~~~~~~~~~D~vtgT~hKaL~--GP~GG~I~~---~~~l~~~L----~~a~P~i~gg~l~p~iAA~avAl~e-- 331 (493)
T PRK13580 266 VFT---GDEDPVPHADIVTTTTHKTLR--GPRGGLVLA---KKEYADAV----DKGCPLVLGGPLPHVMAAKAVALAE-- 331 (493)
T ss_pred cch---hhcCCCCCCcEEEeCChhhcc--CCCeEEEEe---cHHHHHHH----hhCCCcccCCCccHHHHHHHHHHHH--
Confidence 100 000111246688999999982 333477644 67755554 2222122333333322222212211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-CcceeeecCC-----CHHHHHHhhhcCcEEEcC----
Q 015283 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSFTGL-----NKAQSDNMTNKWHVYMTK---- 381 (410)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~---- 381 (410)
.. ....+++++++.++.++|.+.|. +.|+ .+... ..+..+.+.+ +...+.+.|++.||++.+
T Consensus 332 ~~---~~ef~~y~~~l~~Na~~La~~L~-~~G~----~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~P 403 (493)
T PRK13580 332 AR---TPEFQKYAQQVVDNARALAEGFL-KRGA----RLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIP 403 (493)
T ss_pred Hh---CccHHHHHHHHHHHHHHHHHHHH-hcCC----CccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCC
Confidence 00 11124678899999999999999 8884 33211 1223333433 123456566778999863
Q ss_pred ---------CC-eEEecC-----CCcccHHHHHHHHHHHhhh
Q 015283 382 ---------DG-RISLAG-----LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 382 ---------~g-Ris~~~-----~~~~~i~~~~~~l~~~l~~ 408 (410)
.+ ||+... ++++|++++++.|.++++.
T Consensus 404 tvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 404 SDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred CCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 12 887543 4589999999999988764
No 268
>PRK06541 hypothetical protein; Provisional
Probab=99.75 E-value=5.3e-16 Score=150.32 Aligned_cols=343 Identities=13% Similarity=0.078 Sum_probs=194.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCc--cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~--~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|..-...|+. +|.+.+++.+++... +.. .| ......++.+.+++..... .+.+.+ +++
T Consensus 52 ~~ylD~~~g~~~~~lGh~--~p~v~~Av~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~------~~~v~f--~~s 120 (460)
T PRK06541 52 KRYLDGLAGLFVVQVGHG--RAELAEAAAKQAGTLAFFPLWSY-AHPPAIELAERLAALAPGD------LNRVFF--TTG 120 (460)
T ss_pred CEEEECCccHHhccCCCC--CHHHHHHHHHHHhhCcCcccccc-CCHHHHHHHHHHHHhCCCC------cCEEEE--cCC
Confidence 467888877432344554 588999888887542 111 12 2223345555555543211 357899 999
Q ss_pred hhhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCC---cccC--
Q 015283 111 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT---VGLD-- 166 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~---~~~d-- 166 (410)
|++|++.+.++.+.+. + ..+|+...-+|.+...... ..|. .+..+|..+... +.-+
T Consensus 121 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 200 (460)
T PRK06541 121 GSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPE 200 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHH
Confidence 9999999988887652 1 3678888877765532211 1111 111222110000 1111
Q ss_pred ------hhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 167 ------FEGMIADIKAA-PGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 167 ------~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
++.+++.+.+. +....++++...++++|.+.+ .+.+++|.++|++||+++|+||++.+|+-. ...+...
T Consensus 201 ~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~---G~~~a~~ 277 (460)
T PRK06541 201 AFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRL---GEMFGCE 277 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---chhhhhh
Confidence 35667766532 234566665555999998876 666999999999999999999999888632 2222222
Q ss_pred HHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283 239 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK 317 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~ 317 (410)
.+ +..++++ ++||.++ .|+ ++|+++. ++++.+.+...........+...+.++..++...|+- + .
T Consensus 278 ~~-gv~PDiv---t~gK~l~-~G~~pigav~~---~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~--l----~ 343 (460)
T PRK06541 278 RF-GYVPDII---TCAKGIT-SGYSPLGAMIA---SDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDI--F----E 343 (460)
T ss_pred hc-CCCCCEE---Eeccccc-CCccceeEEEE---cHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHH--H----H
Confidence 11 2223443 5899998 787 9999755 6675554432111111111222333333333322221 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCc-ccccCCcceeee-c-C-------CC---------HHHHHHhhhcCcEE
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW-SFILRQIGMFSF-T-G-------LN---------KAQSDNMTNKWHVY 378 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~-~-~-------~~---------~~~~~~ll~~~gi~ 378 (410)
-+...++++++.+++.+.|+ ++.. .++ ......+.++.+ + . ++ ..+...+++ +||+
T Consensus 344 --~~~~~~~~~~~g~~l~~~L~-~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~ 418 (460)
T PRK06541 344 --REGLLDHVRDNEPAFRATLE-KLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFE-AGLY 418 (460)
T ss_pred --hccHHHHHHHHHHHHHHHHH-Hhhc-CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHh-CCeE
Confidence 02345677777888888777 6531 111 123333333321 1 1 00 012345555 6999
Q ss_pred EcCC--C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 379 MTKD--G----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 379 v~~~--g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+. | ||+.+. +|++++++++++|.+++.++
T Consensus 419 ~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 419 CRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred EEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9763 3 777652 49999999999999998653
No 269
>PRK02769 histidine decarboxylase; Provisional
Probab=99.75 E-value=7.4e-16 Score=145.36 Aligned_cols=296 Identities=15% Similarity=0.101 Sum_probs=184.4
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCc--eEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQR--VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR 156 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~--i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 156 (410)
..++.+.+.+++....+.+ +++ ..+ |+|||+++..+....+.+.+++.|++++-.|.+....++..|.+.+.++
T Consensus 63 ~~~~e~~~~~~~a~l~g~~--~~~~~G~~--TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~ 138 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIP--FNESWGYI--TNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVIT 138 (380)
T ss_pred hHHHHHHHHHHHHHHhCCC--CCCCCEEE--ecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceec
Confidence 3445555555544444432 233 366 9999999876643344456889999999999999999999999888888
Q ss_pred eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC---CcccccccCCCCCCCCCCCc
Q 015283 157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN---HIPFFDVAYQGFASGSLDND 233 (410)
Q Consensus 157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~---~~li~Deay~~~~~~~~~~~ 233 (410)
.. .++.+|++.|++.+.+.+.++.+++.+.++|+||. .+++++|+++|+++| +++++|.+|.++...-. ..
T Consensus 139 ~~--~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~---idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~-~~ 212 (380)
T PRK02769 139 SL--PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGA---IDNIKEIQEILKKIGIDDYYIHADAALSGMILPFV-NN 212 (380)
T ss_pred cC--CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcc---cCCHHHHHHHHHHhCCCceEEEEEecccceeeccc-Cc
Confidence 73 46779999999999874445888888899999999 555667777899998 69999999877553211 01
Q ss_pred hhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC---ccc-CCCh---hHHHHHHHH
Q 015283 234 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP---MYS-NPPV---HGARIVANV 306 (410)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~---~~~~~a~~~ 306 (410)
...+ .+ .. ..+.+..|.+|.++.| .++|.+++ .++..+.+... ..+... +.. +.+. ++..++...
T Consensus 213 ~~~~-d~-~~-~vDsis~s~HK~~~~P-~g~G~l~~---r~~~~~~~~~~-~~yl~~~d~t~~GSR~g~~~l~lw~aL~~ 284 (380)
T PRK02769 213 PPPF-SF-AD-GIDSIAISGHKFIGSP-MPCGIVLA---KKKYVERISVD-VDYIGSRDQTISGSRNGHTALLLWAAIRS 284 (380)
T ss_pred cccC-Cc-cC-CCCEEEECCcccCCCC-CCcEEEEE---ehhhhhhcccC-ccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence 0011 00 11 4567778999988733 45788754 44433333211 011001 111 1222 222222222
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCC-eE
Q 015283 307 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG-RI 385 (410)
Q Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g-Ri 385 (410)
+. .+.+++..++..+..+++.+.|+ +.|+ ..+..|......|-..+.+. .++..+...+.. |+
T Consensus 285 lg--------~~G~~~~~~~~~~la~~l~~~L~-~~g~---~~~~~p~~~~v~f~~~~~~~----~~~w~l~~~~~~~hi 348 (380)
T PRK02769 285 LG--------SKGLRQRVQHCLDMAQYAVDRLQ-ANGI---PAWRNPNSITVVFPCPSERI----WKKWHLATSGNQAHI 348 (380)
T ss_pred HC--------HHHHHHHHHHHHHHHHHHHHHHH-hCCC---EEEcCCCceEEEEcCCCHHH----HhCeeEcccCCEEEE
Confidence 22 23457888889999999999998 7764 12344544444443223222 233333333333 77
Q ss_pred EecC-CCcccHHHHHHHHHHHhhh
Q 015283 386 SLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 386 s~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
.+.. ++.+.++.+++.|...+..
T Consensus 349 ~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 349 ITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred EECCCCCHHHHHHHHHHHHHHHhc
Confidence 7544 5888999999999887654
No 270
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.75 E-value=3.5e-16 Score=148.27 Aligned_cols=167 Identities=17% Similarity=0.171 Sum_probs=119.0
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPW 152 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~ 152 (410)
.....|++.++++.... ..++ +++|+.++.++ +..+.+||+|++++|.|++... .+...|.++
T Consensus 50 p~~~~Le~~la~l~g~~-------~al~---~~SG~~Al~~~---l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v 116 (380)
T PRK06176 50 PTRFALEELIADLEGGV-------KGFA---FASGLAGIHAV---FSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSC 116 (380)
T ss_pred hhHHHHHHHHHHHhCCC-------CEEE---ECCHHHHHHHH---HHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEE
Confidence 34778999999995322 3344 57788888764 3457899999999999976543 344567776
Q ss_pred cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283 153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 232 (410)
Q Consensus 153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 232 (410)
..++. .|++.+++.+++ +++++++.+|+||||.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 117 ~~vd~-------~d~e~l~~ai~~---~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~---~ 180 (380)
T PRK06176 117 TIIDT-------SDLSQIKKAIKP---NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ---N 180 (380)
T ss_pred EEcCC-------CCHHHHHHhcCc---CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC---C
Confidence 66654 378889888865 6788888999999999665 667788899999999999998754422 1
Q ss_pred chhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283 233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 281 (410)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 281 (410)
++ ....++++.|++|.++.+|-.+|.++ +++++++.+++.
T Consensus 181 ---p~-----~~gaDivv~S~tK~l~g~~d~~gG~v-v~~~~~~~~~~~ 220 (380)
T PRK06176 181 ---PL-----LLGADIVVHSGTKYLGGHSDVVAGLV-TTNNEALAQEIA 220 (380)
T ss_pred ---cc-----ccCCCEEEecCceeccCCccceeeEE-EecHHHHHHHHH
Confidence 11 11356889999999976664444442 455566555554
No 271
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.75 E-value=4.6e-16 Score=149.29 Aligned_cols=336 Identities=14% Similarity=0.093 Sum_probs=188.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|.--...|+. +|.+.+++.+++.......+ +.....++.+.+.+.+... .+.+.+ +++|++
T Consensus 53 ~~yiD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~L~~~~~~~------~~~v~f--~~SGsE 121 (433)
T PRK00615 53 KTFIDFCGSWGSLIHGHS--HPKICDAIQQGAERGTSYGL-TSEQEILFAEELFSYLGLE------DHKIRF--VSSGTE 121 (433)
T ss_pred CEEEEcccchhccccCCC--CHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCCCC------cCEEEE--eCchHH
Confidence 567899877543345654 58899988888765331222 3333445666666553211 257888 899999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-h---hhCCCC---c-cce--eeecCC--C-cccChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNI-F---NDARVP---W-SEY--RYYDPK--T-VGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~---~~~g~~---~-~~v--~~~~~~--~-~~~d~~~l~~~i~~~~~~ 180 (410)
|++.+.++.+.+....+|+....+|.++... + ...+.. . ... +..... . .-.|++.+++.+.+.+++
T Consensus 122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 201 (433)
T PRK00615 122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHR 201 (433)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCc
Confidence 9999998887775557888888888775421 1 111100 0 000 000000 0 012678888888654445
Q ss_pred cEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
..++++.....-.|...+ .+-+++|.++|++||+++|+||++.++..+ ..+.... .+..++++ +++|.+|
T Consensus 202 ~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G----~~ga~~~-~gv~PDi~---~~gK~lg- 272 (433)
T PRK00615 202 VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVA----QGGAAAI-YHVKPDIT---VYGKILG- 272 (433)
T ss_pred eEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccccc----HhHHHHh-cCCCCCeE---EEccccc-
Confidence 566666655666677665 455999999999999999999998777322 1222211 12223443 4899998
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
.|+.+|++++ ++++.+.+.........+++. .+.++..++ ...+++++ ..++++++.+++.+
T Consensus 273 gG~p~~av~~---~~~i~~~~~~~~~~~~~~T~~-g~p~~~aa~la~L~~i~~~~-----------~~~~~~~~g~~l~~ 337 (433)
T PRK00615 273 GGLPAAAVVA---HKSIMDHLAPEGTIFQAGTLS-GNPLAMAAGKASINLCREQG-----------FYTQLSTLEQNFLS 337 (433)
T ss_pred CCcceeeeee---cHHHHhhhcCCCCcccCCCCc-ccHHHHHHHHHHHHHHhccc-----------HHHHHHHHHHHHHH
Confidence 6787888644 777555543210111222332 223333333 33333322 23344444444433
Q ss_pred Hhhh---ccCCCCCcccccCCcceeee-c-CC-----------CH----HHHHHhhhcCcEEEcCCC--e--EEecCCCc
Q 015283 337 SLSA---KDKSGKDWSFILRQIGMFSF-T-GL-----------NK----AQSDNMTNKWHVYMTKDG--R--ISLAGLSL 392 (410)
Q Consensus 337 ~l~~---~~g~~~~~~~~~~~~~~~~~-~-~~-----------~~----~~~~~ll~~~gi~v~~~g--R--is~~~~~~ 392 (410)
.|++ +.|.+ +.... .+.++.+ + .. +. .+...+++ +||++.+.. . +|... |+
T Consensus 338 ~l~~~~~~~g~~--v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~ls~~h-t~ 412 (433)
T PRK00615 338 PIEEMIRSQGFP--VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPFEASFLSSAH-SM 412 (433)
T ss_pred HHHHHHHHcCCC--eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCccccccceecCC-CH
Confidence 3330 33321 12221 2222211 0 00 11 23455555 699998864 2 56655 99
Q ss_pred ccHHHHHHHHHHHhhhc
Q 015283 393 AKCEYLADAIIDSYHNV 409 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~~ 409 (410)
++|+++++.+.+++++.
T Consensus 413 ~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 413 ENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998763
No 272
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=7.8e-16 Score=148.63 Aligned_cols=339 Identities=12% Similarity=0.055 Sum_probs=190.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc---cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+|+..|.--...|+. +|.+.+++.+++...... .| ......++.+.+++..... ..+.+.+ +++
T Consensus 54 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lAe~L~~~~p~~-----~~~~v~f--~~S 123 (441)
T PRK05769 54 NVYLDFNAGIAVTNVGHA--HPKVVKAVKEQAEKFLHYSLTDF-YYEPAVELAERLVEIAPGG-----FEKKVFF--TNS 123 (441)
T ss_pred CEEEECCCchhhcccCCC--CHHHHHHHHHHHHhccCccCccc-CCHHHHHHHHHHHHhCCCC-----CCCEEEE--CCc
Confidence 457788777543345554 588888888877542111 12 1222345555555543211 0357899 999
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-hhCCC-------------CccceeeecCCC--cc-c--------
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYDPKT--VG-L-------- 165 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-~~~g~-------------~~~~v~~~~~~~--~~-~-------- 165 (410)
|++|++.+.++.+.+...++|+..+.+|.+..... ...+. .+..++..+... +. -
T Consensus 124 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (441)
T PRK05769 124 GTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNA 203 (441)
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHH
Confidence 99999999888877766678888888886654322 21111 111222210000 00 0
Q ss_pred ChhhHHH-HHhc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh
Q 015283 166 DFEGMIA-DIKA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 241 (410)
Q Consensus 166 d~~~l~~-~i~~--~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 241 (410)
+++.+++ .+.. .++...++++...+...|... +.+.++++.++|++||+++|+||++.+++.. ...+....+
T Consensus 204 ~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~---G~~~a~~~~- 279 (441)
T PRK05769 204 VLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRT---GKMFAIEHF- 279 (441)
T ss_pred HHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---cceehhhcc-
Confidence 1233454 2221 234566666555566667755 4556999999999999999999999987632 122222222
Q ss_pred hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283 242 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 321 (410)
Q Consensus 242 ~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~ 321 (410)
+..++++ ++||.++ .|+++|++++ ++++.+ .......++++ .+.+++.++...|+-- ++
T Consensus 280 gv~pDiv---t~~K~l~-~G~p~gav~~---~~~i~~----~~~~~~~~T~~-g~p~~~aaa~a~L~~l------~~--- 338 (441)
T PRK05769 280 GVEPDII---TLAKAIA-GGLPLGAVIG---RAELMF----LPPGSHANTFG-GNPVAAAAALATLEEL------EE--- 338 (441)
T ss_pred CCCCCEE---EEccccc-CCcccEEEEE---ehhhhh----cCCCCCCCCCC-cCHHHHHHHHHHHHHH------HH---
Confidence 2223444 5899998 7899999754 666432 22222233333 3444445554443311 11
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C---------HHHHHHhhhcCcEEEcCCC----eEE
Q 015283 322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N---------KAQSDNMTNKWHVYMTKDG----RIS 386 (410)
Q Consensus 322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~ll~~~gi~v~~~g----Ris 386 (410)
...++.+++.++|.+.|+ ++....++.......|.+.-+.+ + ..+...+++ .||++.+.| ||+
T Consensus 339 ~~~~~~~~~g~~l~~~L~-~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~Gil~~~~~~~~lr~~ 416 (441)
T PRK05769 339 GLLENAQKLGEYLRKELK-ELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFK-RGLLLLGAGKSAIRII 416 (441)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHh-CCcEEecCCCCEEEEe
Confidence 345566666667777665 54311111111122233322111 1 123445555 699998765 777
Q ss_pred ecC-CCcccHHHHHHHHHHHhhhc
Q 015283 387 LAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 387 ~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+. +|+++++++++++++++.++
T Consensus 417 p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 417 PPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 543 49999999999999998764
No 273
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.74 E-value=4e-16 Score=139.40 Aligned_cols=343 Identities=15% Similarity=0.145 Sum_probs=221.2
Q ss_pred cccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--Ccc----CcCCcccHHHHHHHHHHhcCCC
Q 015283 21 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKE----YLPIEGLAAFNKVTAELLFGAD 94 (410)
Q Consensus 21 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~----y~~~~g~~~lr~aia~~~~~~~ 94 (410)
.+.++..+.+....++--+.+++|+....+ |.|.+|+.+.++..- ..+ -+...-..+|...+|++ +.+
T Consensus 158 ~fP~A~~~se~t~k~VtVWCSNDYLgms~H----p~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~L-HqK- 231 (570)
T KOG1360|consen 158 EFPLAHRYSEATEKKVTVWCSNDYLGMSRH----PEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADL-HQK- 231 (570)
T ss_pred hccchhhccccccCceEEEecCccccccCC----hHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHH-hcC-
Confidence 344555666654455666677777655554 677777777663310 011 11112245788888888 444
Q ss_pred CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283 95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 174 (410)
Q Consensus 95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 174 (410)
+..++| ++.--|++.....++..-||-.|.-.+..+.+.+..++..++.=..+.. -|+++|++++
T Consensus 232 -----~aALlF---sSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL 296 (570)
T KOG1360|consen 232 -----EAALLF---SSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLL 296 (570)
T ss_pred -----cceeee---eeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHH
Confidence 345555 5555566655444555569888888778887777777777665555554 2889999888
Q ss_pred hcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc
Q 015283 175 KAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 253 (410)
Q Consensus 175 ~~~-~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 253 (410)
.+. +..++++.+.+.+.-+|. ...+++|++++++||.+-++||++.--.+++... ..+-+. .-...-+|+.+++
T Consensus 297 ~~~~~svPKivAFEtVhSM~Ga---vcpleelcDvah~yGAiTFlDEVHAVGlYG~rGa-Gvgerd-Gvm~kvDiIsGTL 371 (570)
T KOG1360|consen 297 QSSPKSVPKIVAFETVHSMDGA---VCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGA-GVGERD-GVMHKVDIISGTL 371 (570)
T ss_pred HhCCCCCCceEEEeeeeccCCC---cCCHHHHHHHHHHhCceeeeehhhhhccccCCCC-CccccC-Ccchhhhhcccch
Confidence 764 456788888888999999 4556678888999999999999965433332211 001000 0011256889999
Q ss_pred cccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH--HHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 254 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 254 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
.|+||.-| ||+ +....+++.++.+....++. ++-||.....++ ..+|+.++- ...|++-+++.
T Consensus 372 gKafGcVG---GYI---Aat~~LvDmiRSyAaGFIFT-TSLPP~vl~GAleaVr~lk~~eg--------~~lR~~hqrnv 436 (570)
T KOG1360|consen 372 GKAFGCVG---GYI---AATRKLVDMIRSYAAGFIFT-TSLPPMVLAGALEAVRILKSEEG--------RVLRRQHQRNV 436 (570)
T ss_pred hhhccccc---cee---hhhhhHHHHHHHhcCceEEe-cCCChHHHHhHHHHHHHHhhhhh--------HHHHHHHHHHH
Confidence 99999887 895 44788888888877777765 344554443443 455554322 35667777788
Q ss_pred HHHHHHhhhccCCCCCcccccCCccee-eecCC---CHHHHHHhhhcCcEEEcC-------CC----eEEec-CCCcccH
Q 015283 332 QKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGL---NKAQSDNMTNKWHVYMTK-------DG----RISLA-GLSLAKC 395 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~---~~~~~~~ll~~~gi~v~~-------~g----Ris~~-~~~~~~i 395 (410)
.++.+.|. +.|+ .+++..+-+. +.++. .....+.|+.++||++.. -| ||+.. ..|++.+
T Consensus 437 ~~~kq~l~-~~Gi----PVi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm 511 (570)
T KOG1360|consen 437 KYVKQLLM-ELGI----PVIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMM 511 (570)
T ss_pred HHHHHHHH-HcCC----cccCCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHH
Confidence 88888898 8884 3333332222 33343 345578899999999854 24 77643 2488899
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
+.+++.+..+++++
T Consensus 512 ~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 512 NILVNALLDVWNEV 525 (570)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999988764
No 274
>PRK06062 hypothetical protein; Provisional
Probab=99.73 E-value=1.1e-15 Score=147.91 Aligned_cols=338 Identities=12% Similarity=0.049 Sum_probs=186.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|.--...|+. +|.+.+++.+++..... ..| ......++.+.+++..... .+.+.+ +++|
T Consensus 53 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG 121 (451)
T PRK06062 53 RRYLDFSSQLVNTNIGHQ--HPKVVAAIQEQAARLCTVAPAH-ANDARSEAARLIAERAPGD------LSKVFF--TNGG 121 (451)
T ss_pred CEEEEcccCHHhhcCCCC--CHHHHHHHHHHHHhcCCcCCcc-CCHHHHHHHHHHHHhCCCC------CCEEEE--cCCh
Confidence 567888877542344554 58888888887754211 122 2233345555655553211 368999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhCCC-----------CccceeeecCC--Ccc--cC-------hh
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV-----------PWSEYRYYDPK--TVG--LD-------FE 168 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~g~-----------~~~~v~~~~~~--~~~--~d-------~~ 168 (410)
++|++.+.++.+.+....+|+....+|.+... .+...+. .+..++..... .+. -| ++
T Consensus 122 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 201 (451)
T PRK06062 122 ADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALA 201 (451)
T ss_pred HHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHH
Confidence 99999998888777655788888887766542 2211111 01111110000 010 12 56
Q ss_pred hHHHHHhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283 169 GMIADIKAA-PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246 (410)
Q Consensus 169 ~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 246 (410)
.+++.+... +++..++++...+.-.|.+. +.+-++++.++|++||+++|+||++.+|+-. ...+....+ +-.++
T Consensus 202 ~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRt---G~~~a~~~~-gv~PD 277 (451)
T PRK06062 202 HLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRT---GKWFAIEHF-GVVPD 277 (451)
T ss_pred HHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcC---cHHHHHHhc-CCCCC
Confidence 677777543 23455666555566667775 4555999999999999999999999987632 223333222 22234
Q ss_pred EEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~ 322 (410)
++ +++|.++ .| +.+|.+++ ++++.+.+... ......+++ .+.++..++ ...+++++
T Consensus 278 i~---t~gK~lg-gG~~Pigav~~---~~~i~~~~~~~-~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~~----------- 337 (451)
T PRK06062 278 LI---TFAKGVN-SGYVPLGGVAI---SEAIAATFADR-PYPGGLTYS-GHPLACAAAVATINAMEEEG----------- 337 (451)
T ss_pred ee---eechhhh-cCCcCcEEEEE---cHHHHHHhccC-CCCCCCCCC-CCHHHHHHHHHHHHHHHhcC-----------
Confidence 33 6899998 57 48888754 66755544210 001122333 223333333 33333322
Q ss_pred HHHHHHHHH-HHHHHHhhhccCCCCCc-ccccCCcceeeecCC-------------------CHHHHHHhhhcCcEEEcC
Q 015283 323 MAGRIKNVR-QKLFDSLSAKDKSGKDW-SFILRQIGMFSFTGL-------------------NKAQSDNMTNKWHVYMTK 381 (410)
Q Consensus 323 ~~~~~~~~~-~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~-------------------~~~~~~~ll~~~gi~v~~ 381 (410)
..++.++.. +++.+.|+ ++....+. ...... |.+.-+.+ ...+...+++ .||++.+
T Consensus 338 l~~~~~~~G~~~l~~~L~-~l~~~~~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~~ 414 (451)
T PRK06062 338 IVENAARIGAEVLGPGLR-ELAERHPSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACKE-RGLLPFV 414 (451)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhcCCcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHH-CCcEEee
Confidence 223333333 23444443 32110001 112222 22211111 0123445554 6999876
Q ss_pred CC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 382 DG---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 382 ~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+ ||+.+. +|+++++++++++++++..+
T Consensus 415 ~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 415 NGNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred cCCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 54 776542 59999999999999998764
No 275
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.73 E-value=1.9e-15 Score=142.32 Aligned_cols=305 Identities=13% Similarity=0.072 Sum_probs=187.5
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCC-CCcchhhhhhhCC
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSP-TWGNHKNIFNDAR 149 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p-~y~~~~~~~~~~g 149 (410)
..|.......+|.+++++++.. +.++. +++||.|++++ +...+.+||.| +.. .+......+...|
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~--------e~aV~--v~sGTaAl~ll--~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G 137 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGF--------KHVVP--THQGRGAENLL--SRIAIKPGQYV--PGNMYFTTTRYHQELNG 137 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCC--------CeEEE--eCCHHHHHHHH--HHhCCCCcCEE--CCccchHhhHHHHHhCC
Confidence 5688888899999999999633 35666 89999999986 33346799965 443 4444444467778
Q ss_pred CCccceee--------ecCCCcccChhhHHHHHhcC-CCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCccccc
Q 015283 150 VPWSEYRY--------YDPKTVGLDFEGMIADIKAA-PGGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFD 219 (410)
Q Consensus 150 ~~~~~v~~--------~~~~~~~~d~~~l~~~i~~~-~~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~D 219 (410)
+....+.. .+..++.+|++.+++.+++. .+++.++...+++|.. |+..|.++++++.++|++||+.||+|
T Consensus 138 a~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 138 GIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred cEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 75444431 12456889999999999763 2233333334477888 79999999999999999999999999
Q ss_pred ccCCCC----CC---CCCCCchhHhHHHhh-c-CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283 220 VAYQGF----AS---GSLDNDASSVRLFAT-R-GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP 290 (410)
Q Consensus 220 eay~~~----~~---~~~~~~~~~~~~~~~-~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~ 290 (410)
.+...- .- .++.. .++..... . ...+....|++|.++.+ . -|++ .+++++++++++...-..-..
T Consensus 218 aAra~gna~fI~~re~~y~~--~~i~ei~~e~~s~aD~~t~S~~K~~~~~-~-GG~i--~t~D~eL~~~~r~~~~~~eG~ 291 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQD--KSIKEIVHEMFSYADGCTMSGKKDCLVN-I-GGFL--AMNDEELFDEAKELVVVYEGM 291 (460)
T ss_pred CcchhcChhhhcccccccCC--CcHhHHhhhccCcCcEEEEeCCCCCCCC-C-ceEE--EECCHHHHHHHHHhccccCCC
Confidence 995422 10 00100 11111111 1 12456677899998754 2 2555 678888777765542211111
Q ss_pred -cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------
Q 015283 291 -MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------ 363 (410)
Q Consensus 291 -~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------ 363 (410)
++.+.+..-..+++.-|.+. .+ ..+.+.--+..++|.+.|. +.| +.+..|.+|.-+|++.
T Consensus 292 ~tygg~~grd~~alAvgl~E~------~~--~~y~~~ri~~~~~l~~~L~-~~G----vpv~~p~ggH~v~vda~~~lph 358 (460)
T PRK13237 292 PSYGGMAGRDMEAMAIGIEES------VQ--YEYIEHRVGQVRYLGEKLL-AAG----VPIVEPVGGHAVFLDARRFLPH 358 (460)
T ss_pred cCCCChhhhHHHHHHhHHHhh------ch--HHHHHHHHHHHHHHHHHHH-HCC----CceecCCCceEEEEEhHHhCCC
Confidence 22222222223333223321 11 1222333335677888888 888 3556677776666631
Q ss_pred -------CHHHHHHhhhcCcEEEcCC-----------C----------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283 364 -------NKAQSDNMTNKWHVYMTKD-----------G----------RISLAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 364 -------~~~~~~~ll~~~gi~v~~~-----------g----------Ris~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
...++.+|..+.||-..-- | |++++. .|.+.++.++++|.++.++
T Consensus 359 ~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 359 LPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred CCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 1345667777777754321 1 888764 4889999999999988764
No 276
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=2.4e-15 Score=135.29 Aligned_cols=326 Identities=17% Similarity=0.204 Sum_probs=206.2
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC------cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
.-|+|-..++ ++++.|+++.-..+.+.....| ....-++++.+...+.....+|.. --|+ +.
T Consensus 27 ~~ieLIASEN-------~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~--~anV---QP 94 (413)
T COG0112 27 EHIELIASEN-------FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAE--YANV---QP 94 (413)
T ss_pred hceeeeeccc-------cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCC--cccc---CC
Confidence 5688887765 2379999987665533222333 222223333333333333333322 1233 35
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh---hhCCC--CccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---NDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~---~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 183 (410)
.+|++|+..+ +++.+.|||+|+-.+..++++...- ...|. +.+.+++ +.++..+|.|++++...++ ++++
T Consensus 95 hSGs~AN~av--~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~v-d~et~~IDyD~~~k~a~e~--kPK~ 169 (413)
T COG0112 95 HSGSQANQAV--YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGV-DPETGLIDYDEVEKLAKEV--KPKL 169 (413)
T ss_pred CCchHHHHHH--HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccc-ccccCccCHHHHHHHHHHh--CCCE
Confidence 8888988888 5667899999999998887775543 23343 4455555 3467889999999998874 5566
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC-CCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 262 (410)
++...--.| . .-+++++.++|.+-|.+++.|.+| .++..++..+.+. ....++.+|.+|+| +|-
T Consensus 170 ii~G~SaY~--r---~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~--------~~AdvVTtTTHKTl--rGP 234 (413)
T COG0112 170 IIAGGSAYS--R---PIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL--------PHADVVTTTTHKTL--RGP 234 (413)
T ss_pred EEECccccc--c---ccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC--------CccceEeCCcccCC--CCC
Confidence 664332222 2 346778888899999999999997 3444433222211 12678899999997 588
Q ss_pred CcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283 263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 341 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 341 (410)
|-|.+ .+.+++ +.+.+....++... +|..+...+.+-.+. +..+-.++++.++..++.+.|.+.|. +
T Consensus 235 rGG~I--l~~~ee----l~kkin~aVFPg~qggpl~HviAakaVa~~-----Eal~p~fk~Ya~qVv~NAkaLAe~l~-~ 302 (413)
T COG0112 235 RGGII--LTNDEE----LAKKINSAVFPGLQGGPLMHVIAAKAVAFK-----EALEPEFKEYAKQVVKNAKALAEALK-E 302 (413)
T ss_pred CceEE--EeccHH----HHHHhhhhcCCccCCChHHHHHHHHHHHHH-----HHcChhHHHHHHHHHHHHHHHHHHHH-H
Confidence 87876 444446 55555555555333 444443222222222 11233357888999999999999999 8
Q ss_pred cCCCCCcccccCCcceeee-cC-----CCHHHHHHhhhcCcEEEcCC-------------C-eEEec-----CCCcccHH
Q 015283 342 DKSGKDWSFILRQIGMFSF-TG-----LNKAQSDNMTNKWHVYMTKD-------------G-RISLA-----GLSLAKCE 396 (410)
Q Consensus 342 ~g~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~ll~~~gi~v~~~-------------g-Ris~~-----~~~~~~i~ 396 (410)
.| +++....+-.+.+ ++ ++.+.++.+|++.||.+... | ||... +..+++++
T Consensus 303 ~G----~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~ 378 (413)
T COG0112 303 RG----FKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEME 378 (413)
T ss_pred cC----CeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHH
Confidence 88 4555444444433 33 35778899999999988542 3 88533 35788999
Q ss_pred HHHHHHHHHhhh
Q 015283 397 YLADAIIDSYHN 408 (410)
Q Consensus 397 ~~~~~l~~~l~~ 408 (410)
++.+.|.+++..
T Consensus 379 ~Ia~~I~~vl~~ 390 (413)
T COG0112 379 EIADLIADVLDG 390 (413)
T ss_pred HHHHHHHHHHhc
Confidence 999999998875
No 277
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.73 E-value=3.7e-16 Score=147.97 Aligned_cols=193 Identities=21% Similarity=0.152 Sum_probs=130.8
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 133 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~ 133 (410)
.++.++++.+.+.+++...+ ..-+.++.+++++++.. ++.+. +++||.|+.++...+ .+.+||+|++
T Consensus 4 ~~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~g~--------~~~~~--~~sgt~Al~~al~~l-~~~~gdeVi~ 70 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYFGV--------KYAVA--VSSGTSALHLALRAL-GLGPGDEVIV 70 (363)
T ss_dssp HHHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHHT-TGGTTSEEEE
T ss_pred CHHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHhCC--------CeEEE--eCChhHHHHHHHHhc-CCCcCceEec
Confidence 45666777777766542222 34567999999999743 45666 799999999984322 3459999999
Q ss_pred cCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015283 134 SSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 213 (410)
Q Consensus 134 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 213 (410)
|..+|......+...|++++.+++. .+++.+|++.+++.+++ ++++++ +.+.-|. ..++.+|.++|+++|
T Consensus 71 p~~t~~~~~~ai~~~G~~pv~~Di~-~~~~~id~~~~~~~i~~---~t~ai~---~~h~~G~---~~d~~~i~~~~~~~~ 140 (363)
T PF01041_consen 71 PAYTFPATASAILWAGAEPVFVDID-PETLNIDPEALEKAITP---KTKAIL---VVHLFGN---PADMDAIRAIARKHG 140 (363)
T ss_dssp ESSS-THHHHHHHHTT-EEEEE-BE-TTTSSB-HHHHHHHHHT---TEEEEE---EE-GGGB------HHHHHHHHHHTT
T ss_pred CCCcchHHHHHHHHhccEEEEEecc-CCcCCcCHHHHHHHhcc---CccEEE---EecCCCC---cccHHHHHHHHHHcC
Confidence 9999999999999999999999984 57899999999999986 666666 3366677 568899999999999
Q ss_pred CcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHH
Q 015283 214 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 214 ~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
++||+|.+++.... .... ..... .++.+.|| +|.+. .|. .|++ ++.++++.++++.
T Consensus 141 i~lIeD~a~a~g~~--~~g~-----~~G~~--gd~~~fSf~~~K~i~-~ge-GG~v--~~~~~~~~~~~~~ 198 (363)
T PF01041_consen 141 IPLIEDAAQAFGAR--YKGR-----PVGSF--GDIAIFSFHPTKIIT-TGE-GGAV--VTNDPELAERARA 198 (363)
T ss_dssp -EEEEE-TTTTT-E--ETTE-----ETTSS--SSEEEEESSTTSSS--SSS--EEE--EESTHHHHHHHHH
T ss_pred CcEEEccccccCce--eCCE-----eccCC--CCceEecCCCCCCCc-CCC-CeeE--EecHHHHHHHhhh
Confidence 99999999554331 1110 11112 35556666 68885 454 2555 6778886666654
No 278
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=2e-15 Score=146.13 Aligned_cols=336 Identities=12% Similarity=0.046 Sum_probs=187.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|..-...|+. +|.+.+++.+++.... ...|.+.....++.+.+++..... .+.+.+ +++|
T Consensus 53 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG 122 (457)
T PRK05639 53 NVFIDFLAGAAAASTGYS--HPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIE------NPKVLF--GLSG 122 (457)
T ss_pred CEEEECCcCHHhhccCCC--CHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCC------cCEEEE--eCch
Confidence 467888877532345655 5888988888875421 122333333345666666653211 257888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCC--------C-----CccceeeecCCC--cc----cCh----
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR--------V-----PWSEYRYYDPKT--VG----LDF---- 167 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g--------~-----~~~~v~~~~~~~--~~----~d~---- 167 (410)
++|++.+.++.+.+....+|+....+|.+.... +...+ . .+..+|..+... +. .|.
T Consensus 123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 202 (457)
T PRK05639 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI 202 (457)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence 999999998887776667888888877665422 11111 0 122333211100 00 022
Q ss_pred ----hhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 168 ----EGMIADIKA---APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 168 ----~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
+.+++.+.. .+++...+++...+...|...+ .+-++++.++|++||+++|+||++.+|+-. ...+....
T Consensus 203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Grt---G~~~a~~~ 279 (457)
T PRK05639 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRT---GKWFASEW 279 (457)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcC---chHHHHHh
Confidence 233443321 1345667776666777787654 555999999999999999999999877532 22333222
Q ss_pred HhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH---HHhCChhhHHHH
Q 015283 240 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEW 316 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~ 316 (410)
+ +..+++++ ++|.++ .|+.+|+++. ++++.+. .......++. .+.++..++. ..+.++
T Consensus 280 ~-gv~PDiv~---~gK~l~-gG~pi~av~~---~~~i~~~----~~~~~~~T~~-g~p~~~aaa~a~l~~l~~~------ 340 (457)
T PRK05639 280 F-EVKPDLII---FGKGVA-SGMGLSGVIG---RKELMDL----TSGSALLTPA-ANPVISAAAEATLEIIEEE------ 340 (457)
T ss_pred c-CCCCCEEE---echhhc-CCCcceeEEe---hHHHHhh----cCCCcccCCC-cCHHHHHHHHHHHHHHHHc------
Confidence 2 22335443 899998 6888888754 7775441 1111112232 2333333332 222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------CH----HHHHHhhhcCcEEEcCCC--
Q 015283 317 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NK----AQSDNMTNKWHVYMTKDG-- 383 (410)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~ll~~~gi~v~~~g-- 383 (410)
...++.+++.++|.+.|+ ++....++.......|.+.-+.+ +. .+...+++ +|+++.+.|
T Consensus 341 -----~l~~~~~~~g~~l~~~L~-~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~g~~ 413 (457)
T PRK05639 341 -----NLLKNALKVGEFIKKRLL-EMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFE-LGLILPSYGMF 413 (457)
T ss_pred -----cHHHHHHHHHHHHHHHHH-HHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHh-CCeEEeecCCC
Confidence 223444445555555555 43110111111222333322211 11 23445555 699997642
Q ss_pred ----eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 384 ----RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 384 ----Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
||..+. .|++++++++++|++++.+
T Consensus 414 ~~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 414 GNVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 676443 5999999999999999865
No 279
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.72 E-value=6.8e-16 Score=132.69 Aligned_cols=325 Identities=13% Similarity=0.093 Sum_probs=191.2
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-C-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-P-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
..+++||..+.|+....+|.+...-.+++.++-......++- . ..-+..|...||++ +++ ++-|+. ++
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf-h~r------ED~ily---ps 135 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF-HGR------EDTILY---PS 135 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH-hCC------CceEEe---cc
Confidence 357899999998766665433333334444432221111111 1 11234666667776 444 455655 44
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh-cCCCCcEEEEeCCC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK-AAPGGSFILLHGCA 189 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~~~~ii~~~p 189 (410)
+-.|+.-+ +-+.+.|-|.|.-.+..+.+.++-++.+. +... .|+-.++..+. .++.+-++++....
T Consensus 136 cfdANag~--feail~pedAvfSDeLNhASIIdGirLck-ry~h----------~dv~~l~~~l~~a~k~r~klv~TDg~ 202 (417)
T KOG1359|consen 136 CFDANAGA--FEAILTPEDAVFSDELNHASIIDGIRLCK-RYRH----------VDVFDLEHCLISACKMRLKLVVTDGV 202 (417)
T ss_pred ccccchHH--HHHhcChhhhhhccccccchhhhhhHHHh-hhcc----------chhHHHHHHHHHhhhheEEEEEecce
Confidence 55555444 22336788888888888877776655443 2222 34455543332 22346677776665
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH-HhhcCCcEEEEecccccccccCCCcceEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL-FATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
-.-.|- ...+++|.+++++||.++++||++..+.++.... +... +.-+++.++..++++|++| |---||
T Consensus 203 FSMDGd---iaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGr---Gt~E~~~vm~~vdiinsTLgKAlG--ga~GGy-- 272 (417)
T KOG1359|consen 203 FSMDGD---IAPLEEISQLAKKYGALLFIDECHATGFFGETGR---GTAEEFGVMGDVDIINSTLGKALG--GASGGY-- 272 (417)
T ss_pred eccCCC---cccHHHHHHHHHhcCcEEEEeecccceeecCCCC---ChHHHhCCCCcceehhhhhhhhhc--CCCCCC--
Confidence 656666 5667788888999999999999987666543221 2222 2335678899999999987 444589
Q ss_pred EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH--HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283 269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA--NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 346 (410)
.++++.++.-++++-+.+.++....|...+..+.+ ..+.. ....++.+.+.+++++.+. ..|+
T Consensus 273 -ttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s-----------~~~i~~~~a~~qrfr~~me-~aGf-- 337 (417)
T KOG1359|consen 273 -TTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS-----------SKEIQSRQANTQRFREFME-AAGF-- 337 (417)
T ss_pred -ccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhh-----------HHHHHHHHHHHHHHHHHHH-hcCc--
Confidence 56699977777766666655433333323322221 22222 2334555666777777776 6663
Q ss_pred CcccccCCcce-eeecCC---CHHHHHHhhhcCcEEEc-------CCC----eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 347 DWSFILRQIGM-FSFTGL---NKAQSDNMTNKWHVYMT-------KDG----RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 347 ~~~~~~~~~~~-~~~~~~---~~~~~~~ll~~~gi~v~-------~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
.+....-.+ -+++|. .....+.+|+ .||+|. |.| |+.++. .++++++++++++.++.+-
T Consensus 338 --tIsg~~hPI~pv~lGda~lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 338 --TISGASHPICPVMLGDARLASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred --eecCCCCCccceecccHHHHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 333211111 134443 3456788888 499873 334 555543 4999999999999998654
No 280
>PRK07482 hypothetical protein; Provisional
Probab=99.72 E-value=5.2e-15 Score=143.59 Aligned_cols=340 Identities=14% Similarity=0.078 Sum_probs=188.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|..-...|+. +|.+.+++.++++... .+.+ .+.....++.+.+++..... .+.+.+ +++
T Consensus 50 ~~ylD~~sg~~~~~lGh~--~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~s 119 (461)
T PRK07482 50 RRYIDAFAGLYCVNVGYG--RTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAG------MSKVYY--GLS 119 (461)
T ss_pred CEEEEcccchhhhcCCCC--CHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCc
Confidence 567888888653455654 5889999888876521 1111 12222344555555543211 367888 999
Q ss_pred hhhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhhhhh-hC---------CC---CccceeeecCCCc--------
Q 015283 111 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DA---------RV---PWSEYRYYDPKTV-------- 163 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~~~~-~~---------g~---~~~~v~~~~~~~~-------- 163 (410)
|++|++.+.++.+.+. + ..+|+....+|.+...... .. +. .+..++.......
T Consensus 120 GSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 199 (461)
T PRK07482 120 GSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEE 199 (461)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHH
Confidence 9999999988886542 2 2578888887766432111 11 10 1111211100000
Q ss_pred ---ccChhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 164 ---GLDFEGMIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 164 ---~~d~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
..+++.+++.+.+ .++...++++...+...|... +..-+++|.++|++||+++|.||++.+|+-. ...+...
T Consensus 200 ~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRt---G~~~a~~ 276 (461)
T PRK07482 200 QFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRL---GSMFGSD 276 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcC---cchhhHH
Confidence 0135667777743 234566666666666667775 4556999999999999999999999998632 2333333
Q ss_pred HHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHH---HHhCCh
Q 015283 239 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVA---NVVGNP 310 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~---~~l~~~ 310 (410)
. .+..++++ .++|.++ .|. .+|.+++ .+++.+.+..... . ....++ +...++..++. ..++++
T Consensus 277 ~-~gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~Aaa~a~L~~~~~~ 347 (461)
T PRK07482 277 H-YGIEPDLI---TVAKGLT-SAYAPLSGSIV---GEKVWDVLEQGSDEHGAIGHGWTY-SGHPICAAAALANLDILERE 347 (461)
T ss_pred h-cCCCCCEE---EEccccc-cCccccceeee---cHHHHHHHhcccccCCccccCCCC-CcCHHHHHHHHHHHHHHHhC
Confidence 2 23334555 4799997 574 7888644 6665444432100 0 111222 23333334443 333333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhhc
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTNK 374 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~~ 374 (410)
+ ..++.++..+++.+.|+ ++-...++.......|.+.-+.+ + ..+...+++
T Consensus 348 ~-----------l~~~~~~~g~~l~~~L~-~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~- 414 (461)
T PRK07482 348 N-----------LVGNAAEVGAYFRARLR-AAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALE- 414 (461)
T ss_pred C-----------HHHHHHHHHHHHHHHHH-HHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHH-
Confidence 2 23344555555555554 33111111111222333322211 1 123445555
Q ss_pred CcEEEcCC--C---eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283 375 WHVYMTKD--G---RISLA-GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 375 ~gi~v~~~--g---Ris~~-~~~~~~i~~~~~~l~~~l~~ 408 (410)
+||++.+. + |+..+ .+|++++++++++|.+++.+
T Consensus 415 ~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 415 RGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred CCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 69998543 4 66533 35999999999999999865
No 281
>PRK05965 hypothetical protein; Provisional
Probab=99.71 E-value=5.1e-15 Score=143.62 Aligned_cols=340 Identities=12% Similarity=0.063 Sum_probs=192.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCcc-C-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKE-Y-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~-y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|..-...|+. +|++.+++.+++... +... | .+.....+|.+.+++..... .+.+.+ +++
T Consensus 46 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~s 115 (459)
T PRK05965 46 HQLLDAFAGLWCVNVGYG--QESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGS------LNHVYF--TLG 115 (459)
T ss_pred CEEEECcccHHhccCCCC--CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCC------cCEEEE--eCC
Confidence 468898877543344554 588999988887542 1111 1 11222335555555553211 367888 999
Q ss_pred hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhh-hh---------CCC---Cccceeeec--CCCcccC---
Q 015283 111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIF-ND---------ARV---PWSEYRYYD--PKTVGLD--- 166 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~-~~---------~g~---~~~~v~~~~--~~~~~~d--- 166 (410)
|++|++.+.++.+.+. +| .+|+..+.+|.+..... .. .+. .+..++... ...+..|
T Consensus 116 GSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (459)
T PRK05965 116 GSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQA 195 (459)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHH
Confidence 9999999998877652 22 57888888887654211 11 111 111222110 0001112
Q ss_pred -----hhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 167 -----FEGMIADIKAAP-GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 167 -----~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
++.+++.+.+.. +....+++...+...|... |..-++++.++|++||+++|.||+..+|+-. ...+....
T Consensus 196 ~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRt---G~~~a~~~ 272 (459)
T PRK05965 196 IIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRT---GPLFACEA 272 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccC---chhhhHhh
Confidence 246677776432 4556666666677778765 5555999999999999999999999998732 23333332
Q ss_pred HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHH---HHHhCChh
Q 015283 240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIV---ANVVGNPA 311 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a---~~~l~~~~ 311 (410)
+ +..++++ .++|.++ .| +.+|.+++ ++++.+.+..... . ...+++. ...++..++ ..+++++
T Consensus 273 ~-gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa~a~L~~l~~~- 342 (459)
T PRK05965 273 E-GVVPDLM---TVAKGLT-SGYVPMGAVLM---SDHVYQGIADGAGAAAPVGHGYTYS-AHPVSAAVGLEVLRLYHEG- 342 (459)
T ss_pred c-CCCCCeE---Eechhhc-cCCcceeEEEE---cHHHHHHHhccccccccccccCCCC-CCHHHHHHHHHHHHHHHhc-
Confidence 2 2334555 5799998 68 48999755 7776555432110 0 1222333 333333333 3333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhhcC
Q 015283 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTNKW 375 (410)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~~~ 375 (410)
...++.++..+++.+.|+ ++.. .++.......|.+.-+.+ + ..+..++++ +
T Consensus 343 ----------~l~~~~~~~g~~l~~~l~-~l~~-~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 409 (459)
T PRK05965 343 ----------GLLANGQKAGPRFAAGLD-ALRA-HPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYA-N 409 (459)
T ss_pred ----------cHHHHHHHHHHHHHHHHH-hhcc-CCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHh-C
Confidence 233455566666666665 5421 111111223333322111 0 112344454 6
Q ss_pred cEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 376 HVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 376 gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
||++.+.| |+..+ .++++++++++++|.+++.++
T Consensus 410 Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 410 GLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred CeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99998765 55533 249999999999999998653
No 282
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=4.1e-15 Score=144.15 Aligned_cols=328 Identities=16% Similarity=0.141 Sum_probs=183.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc------CcCCcccHHHHHH----HHHHhcCCCCCcccCCce
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNKV----TAELLFGADNSVLKEQRV 103 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~a----ia~~~~~~~~~~~~~~~i 103 (410)
..-|+|-.+++ ++++.+++++...+...+..+ |....-++++.+. .++.+... .+.+
T Consensus 34 ~~~l~liasen-------~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~------~~~~ 100 (475)
T PLN03226 34 WKGLELIASEN-------FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD------PEKW 100 (475)
T ss_pred HcCeeEecCCc-------cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC------ccee
Confidence 35688887764 237889998877662222122 2223333444331 22222222 2333
Q ss_pred -EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCC---CCcchhhhhhh---CCCCcc----ceeeecCCCcccChhhHHH
Q 015283 104 -ATVQGLSGTGSLRLAAALIERYFPGAKVLISSP---TWGNHKNIFND---ARVPWS----EYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 104 -~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p---~y~~~~~~~~~---~g~~~~----~v~~~~~~~~~~d~~~l~~ 172 (410)
+-++.++|+.|+..+ +.+.+.|||+|+..+. +|..+...... .+.... .+.+ +.+++.+|++++++
T Consensus 101 ~~nv~~~SG~~AN~av--~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d~Le~ 177 (475)
T PLN03226 101 GVNVQPLSGSPANFAV--YTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYDKLEK 177 (475)
T ss_pred EEecCcCchHHHHHHH--HHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHHHHHH
Confidence 224557888888887 5566889999998553 33333222211 111111 2333 23567799999999
Q ss_pred HHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 173 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 173 ~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
.+.+. +++++++. .+ .+|... ++++|.++|+++|+++++|+++..-... .+....+ ....+++++|
T Consensus 178 ~l~~~--~pklIv~~-~S-~~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~-~~~~~~p------~~~~Div~~t 243 (475)
T PLN03226 178 KAMLF--RPKLIIAG-AS-AYPRDW---DYARMRKIADKVGALLMCDMAHISGLVA-AQEAASP------FEYCDVVTTT 243 (475)
T ss_pred HHhhc--CCeEEEEe-cC-cCCCcc---CHHHHHHHHHHcCCEEEEEchhhhCccc-CCCCCCC------CCCCeEEEec
Confidence 98753 34444432 22 367744 4557778899999999999996433222 1111111 1135688999
Q ss_pred ccccc-cccCCCcceEEEEeCCchhHH----------HHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHH
Q 015283 253 YSKNL-GLYAERIGAMNVVCSSSDLAA----------RVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEM 320 (410)
Q Consensus 253 ~sK~~-~~~G~r~G~l~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~ 320 (410)
++|++ |+.| |++++ +++..+ .+...........+.+.+...+.++ ...++.- .....
T Consensus 244 ~hK~L~GP~G---g~I~~---~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i-----~~~~~ 312 (475)
T PLN03226 244 THKSLRGPRG---GMIFF---RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA-----MTPEF 312 (475)
T ss_pred CcccccCCCc---eEEEE---chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH-----hCcCH
Confidence 99998 5444 66533 544321 1111122111112222222222222 2222210 01123
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCc-ceeeec-----CCCHHHHHHhhhcCcEEEcCC------------
Q 015283 321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI-GMFSFT-----GLNKAQSDNMTNKWHVYMTKD------------ 382 (410)
Q Consensus 321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~ll~~~gi~v~~~------------ 382 (410)
++++++..++.++|.+.|. +.|+ .+..+.. ...+++ +++...+.+.|++.||.+..+
T Consensus 313 ~~~~~~~~~na~~L~~~L~-~~G~----~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~ 387 (475)
T PLN03226 313 KAYQKQVKANAAALANRLM-SKGY----KLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPG 387 (475)
T ss_pred HHHHHHHHHHHHHHHHHHH-hCCC----EEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCC
Confidence 5778899999999999998 8773 4443211 222333 345667777778789988532
Q ss_pred C-eE-----EecCCCcccHHHHHHHHHHHhh
Q 015283 383 G-RI-----SLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 383 g-Ri-----s~~~~~~~~i~~~~~~l~~~l~ 407 (410)
| |+ +-.++++++++++++.|.++++
T Consensus 388 giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 388 GVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 3 55 3335688999999999999886
No 283
>PRK07678 aminotransferase; Validated
Probab=99.71 E-value=4.9e-15 Score=143.54 Aligned_cols=336 Identities=11% Similarity=0.059 Sum_probs=186.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-Cc-cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~-~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|..-...|+. +|.+.+++.+++.... .. .| +.....++.+.+++.+.. .+.+.+ +++|
T Consensus 47 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~-~~~~~~~lae~l~~~~~~-------~~~v~f--~~sG 114 (451)
T PRK07678 47 NRYLDGMSGLWCVNVGYG--RKELAEAAYEQLKTLSYFPLTQ-SHEPAIKLAEKLNEWLGG-------EYVIFF--SNSG 114 (451)
T ss_pred CEEEEccccHHhhcCCCC--CHHHHHHHHHHHHhcCcccccc-CCHHHHHHHHHHHHhCCC-------CCEEEE--eCCc
Confidence 467888877542344554 5888888888775421 11 12 222334566666655311 247888 9999
Q ss_pred hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCCC--cc-----c
Q 015283 112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT--VG-----L 165 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~--~~-----~ 165 (410)
++|++.+.++.+.+. +| .+|+....+|.+...... ..|. .+..++..+... +. .
T Consensus 115 seA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (451)
T PRK07678 115 SEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIY 194 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHH
Confidence 999999988887653 23 578888887766543221 1111 112222110000 00 1
Q ss_pred C---hhhHHHHHh-cCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 166 D---FEGMIADIK-AAPGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 166 d---~~~l~~~i~-~~~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
| ++.+++.+. ..++....+++...+.-.|.+.+ .+-++++.++|++||+++|.||++.+|+-. ...+....
T Consensus 195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~~~~~- 270 (451)
T PRK07678 195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRT---GKAFGFMN- 270 (451)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcC---chhHHHHh-
Confidence 1 223455564 22345666666666666677754 455999999999999999999999898732 23334333
Q ss_pred hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---hhccCcccCCChhHHHHHH---HHhCChhhH
Q 015283 241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---RLARPMYSNPPVHGARIVA---NVVGNPALF 313 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~---~~l~~~~~~ 313 (410)
.+..++++ +++|.+| .| +.+|.+++ ++++.+.+..... ....++++ .+.++..++. ..+.++
T Consensus 271 ~gv~PDiv---t~gK~lg-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~h~~T~~-gnp~~~aaa~a~l~~l~~~--- 339 (451)
T PRK07678 271 YGVKPDII---TMAKGIT-SAYLPLSATAV---KKEIYEAFKGKGEYEHFRHVNTFG-GNPAACALALKNLEIMENE--- 339 (451)
T ss_pred cCCCCCEE---Eeecccc-cCCcceeEEEE---cHHHHHHHhccCcccccccCCCCC-cCHHHHHHHHHHHHHHHhC---
Confidence 22234544 6799998 46 68999755 7776555432110 01223333 3333333333 333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceeeecCC----------CH----HHHHHhhhcCc
Q 015283 314 DEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL----------NK----AQSDNMTNKWH 376 (410)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~ll~~~g 376 (410)
...++.++..++|.+.|++ +.+. +...... |.+.-+.+ +. .+...+++ +|
T Consensus 340 --------~~~~~~~~~g~~l~~~l~~~~~~~~~---v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~-~G 406 (451)
T PRK07678 340 --------NLIERSAQLGELLLEQLKEELGEHPL---VGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACKE-KG 406 (451)
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHhcCCC---EEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHHH-CC
Confidence 2233444444455544430 2221 1112222 33221111 11 22345555 69
Q ss_pred EEEcCC--------C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 377 VYMTKD--------G--RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 377 i~v~~~--------g--Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
|++.+. . ||+.+. +|+++++++++++.+++.++
T Consensus 407 v~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 407 LIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred cEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 998652 2 666442 49999999999999999875
No 284
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=6.1e-15 Score=142.68 Aligned_cols=340 Identities=10% Similarity=-0.004 Sum_probs=192.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCcc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|..-...|+. +|.+.+++.+++... +... ..+.....++.+.+++..... .+.+.+ +++|
T Consensus 54 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~sG 123 (453)
T PRK06943 54 RRYLDAISSWWVNLFGHA--NPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGT------LGHAFF--ASDG 123 (453)
T ss_pred CEEEEcchHHHHhcCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCC
Confidence 467888777542344655 588888888877542 1111 112223334555555542111 257888 9999
Q ss_pred hhHHHHHHHHHHHh-----CC-CCEEEEcCCCCcchhh-hhhhCCC------------CccceeeecCCC--c-------
Q 015283 112 TGSLRLAAALIERY-----FP-GAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKT--V------- 163 (410)
Q Consensus 112 t~a~~~~~~~~~~~-----~~-gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~~--~------- 163 (410)
++|++.+.++.+.+ .+ ..+|+....+|.+... .+...|. .+..++..+... +
T Consensus 124 seAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (453)
T PRK06943 124 ASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADV 203 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHH
Confidence 99999998877543 12 3678888888866532 1111110 122222211100 0
Q ss_pred -ccChhhHHHHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 164 -GLDFEGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 164 -~~d~~~l~~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
.-+++.+++.+...++...++++.. .+...|... +.+-++++.++|++||+++|.||++.+|+-. ...+....+
T Consensus 204 ~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRt---G~~fa~~~~ 280 (453)
T PRK06943 204 AARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRT---GTFFACEQA 280 (453)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCC---cchhHHHhC
Confidence 0134667777765445666666555 367778755 5555999999999999999999999998632 233433332
Q ss_pred hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH---HhhccCcccCCChhHHHHHH---HHhCChhhH
Q 015283 241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KRLARPMYSNPPVHGARIVA---NVVGNPALF 313 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~ 313 (410)
+..++++ .++|.++ .| +.+|.+++ ++++.+.+.... .....+++. ...++..++. ..++++
T Consensus 281 -gv~PDiv---t~gKgl~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~i~~~--- 348 (453)
T PRK06943 281 -GVWPDFL---CLSKGIS-GGYLPLSLVLS---RDAIFAAFYDDDVTRGFLHSHSYT-GNPLACRAALATLDLFAED--- 348 (453)
T ss_pred -CCCCCeE---eeehhhc-cCcccceEEEE---cHHHHHhhcccCccCCccCCCCCC-CCHHHHHHHHHHHHHHHhc---
Confidence 3334566 4699998 68 58999755 777555443210 001222332 3333333333 333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C------HHHHHHhhhcCcEEEcCCC
Q 015283 314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N------KAQSDNMTNKWHVYMTKDG 383 (410)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~------~~~~~~ll~~~gi~v~~~g 383 (410)
...++.++..+++.+.|+ ++.....+..+ ...|.+.-+.+ + ..+..++++ +||++.+.|
T Consensus 349 --------~l~~~~~~~G~~l~~~L~-~l~~~~~v~~v-rG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~-~Gll~~~~g 417 (453)
T PRK06943 349 --------DVLARNARKSARLRAALA-PLAAHPQVRHL-RQRGTIFAFDVALDGDAARTFSRRFFEAALE-RELLLRPIG 417 (453)
T ss_pred --------CHHHHHHHHHHHHHHHHH-HHhcCCCEEeE-eccccEEEEEEccCCCcchHHHHHHHHHHHH-CCcEEEecC
Confidence 233455555666666665 44210012222 23333322221 1 123445555 699998865
Q ss_pred ---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 384 ---RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 ---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+.+ .+|++++++++++|++++.++
T Consensus 418 ~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 418 TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 77733 249999999999999998753
No 285
>PRK07046 aminotransferase; Validated
Probab=99.71 E-value=6.8e-15 Score=142.20 Aligned_cols=331 Identities=15% Similarity=0.076 Sum_probs=186.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|.--...|+. +|.+.+++.+++.......+ +.....++.|.+++.+ + .+.+.| +++||+
T Consensus 75 ~~yiD~~~g~g~~~lGh~--~p~i~~Av~~q~~~~~~~~~-~~~~~~~lAe~l~~~~----~----~~~v~F--~nSGtE 141 (453)
T PRK07046 75 HRYDDFCLGDTGAMFGHS--PAPVARALAEQARRGLTTML-PSEDAAWVGEELARRF----G----LPYWQV--ATTATD 141 (453)
T ss_pred CEEEEecccccccccCCC--CHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHh----C----CCEEEE--ECCHHH
Confidence 467888766532344554 58899998888765432223 3333345555555553 1 367889 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-h--CCCC-----cccee--eec---CCCcccChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D--ARVP-----WSEYR--YYD---PKTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~--~g~~-----~~~v~--~~~---~~~~~~d~~~l~~~i~~~~~~ 180 (410)
|.+.+.++.+.+...++|+..+.+|.++..... . .+.. ...++ ..+ .-.+ .|++.+++.+.. ++
T Consensus 142 A~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~--~~ 218 (453)
T PRK07046 142 ANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALAD--GD 218 (453)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCC--CC
Confidence 999999988887766889998988877632111 1 1100 00000 000 0011 278888888853 34
Q ss_pred cEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
...+++...+.-.|.+.+ .+-++++.++|++||+++|.||+.. |..+ ... .....+..++++ +++|.+|
T Consensus 219 vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g-~Gg----~~~~~gv~PDi~---t~gK~lg- 288 (453)
T PRK07046 219 VAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSG-PGG----YTRAHGLEPDFL---VVGKPIA- 288 (453)
T ss_pred eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccC-Ccc----hhHHhCCCccce---eehhhhc-
Confidence 556665555555566554 4559999999999999999999976 4322 111 111122233444 5899998
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHH-----h-hccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLK-----R-LARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~-----~-~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
.|+.+|.+.+ ++++.+.+..... . ....++. +|...+...+ ...+.++++ .+++++..
T Consensus 289 gG~Pi~av~g---~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~-----------~~~~~~~g 354 (453)
T PRK07046 289 GGVPCAVYGF---SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAA-----------YAHMLALA 354 (453)
T ss_pred CCCcceeeee---hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccH-----------HHHHHHHH
Confidence 6899998654 7776555432110 0 1112332 3333322222 344443322 23333333
Q ss_pred HHHHHHhh---hccCCCCCcccccCCccee-eec-C------------CCH----HHHHHhhhcCcEEEcCCC---eEEe
Q 015283 332 QKLFDSLS---AKDKSGKDWSFILRQIGMF-SFT-G------------LNK----AQSDNMTNKWHVYMTKDG---RISL 387 (410)
Q Consensus 332 ~~l~~~l~---~~~g~~~~~~~~~~~~~~~-~~~-~------------~~~----~~~~~ll~~~gi~v~~~g---Ris~ 387 (410)
++|.+.|+ ++.++. +. ....+.++ +.. . .+. .+...+++ +||++.|.+ +++.
T Consensus 355 ~~l~~~L~~l~~~~~~~--~~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~~~~~~p 430 (453)
T PRK07046 355 ARLAAGLRAVIARHGLP--WH-VTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGVLITPFHNMMLVCP 430 (453)
T ss_pred HHHHHHHHHHHHhCCCC--eE-EEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCCEEecccCcEEEeC
Confidence 33333333 033321 11 11222222 111 1 011 12345555 699998865 6776
Q ss_pred cCCCcccHHHHHHHHHHHhhhc
Q 015283 388 AGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 388 ~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ .++++++++++++.++++++
T Consensus 431 ~-~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 431 A-TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred C-CCHHHHHHHHHHHHHHHHHH
Confidence 5 59999999999999998764
No 286
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=6.4e-15 Score=141.73 Aligned_cols=157 Identities=18% Similarity=0.114 Sum_probs=117.1
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPW 152 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~ 152 (410)
....+|++.++++.... ..++ +++|++|+.++ +...+.+||+|+++.+.|.+... .+...|.++
T Consensus 63 p~~~~le~~lA~l~g~~--------~al~--~~SG~~Ai~~a--l~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v 130 (427)
T PRK05994 63 PTNAVLEERVAALEGGT--------AALA--VASGHAAQFLV--FHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQV 130 (427)
T ss_pred ccHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEE
Confidence 34578899999995332 3444 69999999987 34447899999999999986543 356778888
Q ss_pred cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283 153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 232 (410)
Q Consensus 153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 232 (410)
+.++. .|++.+++.+++ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 131 ~~vd~-------~d~~~l~~ai~~---~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~---- 193 (427)
T PRK05994 131 RWADA-------DDPASFERAITP---RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLI---- 193 (427)
T ss_pred EEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence 77764 278889888864 6778888999999999775 667888899999999999997632211
Q ss_pred chhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
. ++ ....++++.|++|.+|.+|-.+|.+++
T Consensus 194 ~--pl-----~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 194 R--PI-----EHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred C--cc-----ccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 1 11 123568899999999877766777643
No 287
>PRK07481 hypothetical protein; Provisional
Probab=99.70 E-value=7.5e-15 Score=142.14 Aligned_cols=342 Identities=15% Similarity=0.106 Sum_probs=187.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc-cC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-EY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|.--...|+. .|.+.+++.+++...... .+ .......++.+.+++.+... ..+.+.+ +++
T Consensus 42 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~-----~~~~v~f--~~s 112 (449)
T PRK07481 42 KKLLDGVGGLWNVNVGHN--REEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPE-----GMRRVFF--SSG 112 (449)
T ss_pred CEEEECchhHHhhcCCCC--CHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCC-----CCCEEEE--cCc
Confidence 467888776442345554 588889888887542111 11 12222334555555543110 1357888 999
Q ss_pred hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCC------------CccceeeecCC--Ccc-cChh
Q 015283 111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPK--TVG-LDFE 168 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~--~~~-~d~~ 168 (410)
|++|++.+.++.+.+. +| .+|+...-+|.+... .+...+. .+..++..... .++ .|.+
T Consensus 113 GsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 192 (449)
T PRK07481 113 GSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPE 192 (449)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHH
Confidence 9999999988887653 33 578888887766532 1111110 11112211000 011 1333
Q ss_pred h--------HHHHHh-cCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 169 G--------MIADIK-AAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 169 ~--------l~~~i~-~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
. +++.+. ..++...++++...+.-.|... +.+-++++.++|++||+++|.||++.+|+-. ...+...
T Consensus 193 ~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~a~~ 269 (449)
T PRK07481 193 ELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRT---GSWFGSR 269 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcC---chhhHhh
Confidence 3 333343 2234566666666666677765 4555999999999999999999999988632 2233332
Q ss_pred HHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHHH---HhCCh
Q 015283 239 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVAN---VVGNP 310 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~---~l~~~ 310 (410)
. .+..++++ .++|.++ .| +.+|.+++ ++++.+.+..... . ....++. ...++..++.. .+.++
T Consensus 270 ~-~gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~L~~l~~~ 340 (449)
T PRK07481 270 G-WGVKPDIM---CLAKGIT-SGYVPLGATMV---NARIADAFEANADFGGAIMHGYTYS-GHPVACAAALATLDIVVRE 340 (449)
T ss_pred h-cCCCCCEE---EEeeccc-CCCcCceEEEE---cHHHHHHHhccCccccccccCCCCC-CCHHHHHHHHHHHHHHHhh
Confidence 2 22234554 5699997 57 58898755 6775554432110 0 1122332 33333333333 33322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C--H----HHHHHhhhc
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N--K----AQSDNMTNK 374 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~--~----~~~~~ll~~ 374 (410)
...++.++..+++.+.|+ ++-...++.......|.+.-+.+ + . .+..++++
T Consensus 341 -----------~l~~~~~~~g~~l~~~L~-~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 407 (449)
T PRK07481 341 -----------DLPANAAKRGAYLLEGLQ-PLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARE- 407 (449)
T ss_pred -----------hHHHHHHHHHHHHHHHHH-HHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHh-
Confidence 233445555555555555 43211111111122233322211 1 1 12344444
Q ss_pred CcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 375 WHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 375 ~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.||++.+.| ||+.+. +|++++++++++|.+++.++
T Consensus 408 ~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 408 NGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 699998876 777443 49999999999999998764
No 288
>PLN02271 serine hydroxymethyltransferase
Probab=99.70 E-value=1.5e-14 Score=138.34 Aligned_cols=332 Identities=15% Similarity=0.143 Sum_probs=198.3
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc------CCcccHHHHHHHHHHhcCCCCCcccC--CceEEE
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKVTAELLFGADNSVLKE--QRVATV 106 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~aia~~~~~~~~~~~~~--~~i~~~ 106 (410)
.-|+|-..++ ++++.+++++...+.+.+..+|+ ....++++.....+.....++.+... -||-
T Consensus 149 ~~l~LIASEN-------~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQ-- 219 (586)
T PLN02271 149 KGIELIASEN-------FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQ-- 219 (586)
T ss_pred cCeeeccccc-------cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCccccccccee--
Confidence 4577776654 23789998876655433223332 22223344333333333333322111 2343
Q ss_pred ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh---------hhCCCCccceeee-cCCCcccChhhHHHHHhc
Q 015283 107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---------NDARVPWSEYRYY-DPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~---------~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~ 176 (410)
..+|+.|+..+ +.+.+.|||+|+..+..++++.... ...|..+..+++. +.+++.+|++++++....
T Consensus 220 -p~SGs~AN~aV--~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~ 296 (586)
T PLN02271 220 -PYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD 296 (586)
T ss_pred -eccHHHHHHHH--HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh
Confidence 47888888888 5556889999999998888775543 2334444444431 245677999999986544
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283 177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 256 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 256 (410)
.++++++++...+| ..+ +++++.++|+++|+++++|.++..-... .+..+.+ ....+++.+|.+|+
T Consensus 297 --~rPKLII~g~Sayp--r~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa-~g~~~sP------~~~aDvvt~TTHKt 362 (586)
T PLN02271 297 --FRPKILICGGSSYP--REW---DYARFRQIADKCGAVLMCDMAHISGLVA-AKECVNP------FDYCDIVTSTTHKS 362 (586)
T ss_pred --cCCeEEEECchhcc--CcC---CHHHHHHHHHHcCCEEEEECcccccccc-cCcCCCC------CcCCcEEEeCCccc
Confidence 47788887777777 333 5667777799999999999996532221 1110001 11367899999999
Q ss_pred ccccCCCcceEEEEeCCchh----------------HHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHH
Q 015283 257 LGLYAERIGAMNVVCSSSDL----------------AARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAE 319 (410)
Q Consensus 257 ~~~~G~r~G~l~~~~~~~~~----------------~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~ 319 (410)
+ .|-|-|.++. +++. -..+.+.+....++... ++......+.+..+..- ...+
T Consensus 363 L--rGPrGG~I~~---r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea-----~~~e 432 (586)
T PLN02271 363 L--RGPRGGIIFY---RKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQV-----ATPE 432 (586)
T ss_pred C--CCCCceEEEe---cccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHH-----hChH
Confidence 7 3555577643 3221 01233444444444222 33333222222222211 1223
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee-eecCC-----CHHHHHHhhhcCcEEEcC------------
Q 015283 320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGL-----NKAQSDNMTNKWHVYMTK------------ 381 (410)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~ll~~~gi~v~~------------ 381 (410)
++++.+++.++.+.|.+.|. +.|+ .+....+-.+ +++++ +...+++.|++.||.+..
T Consensus 433 fk~Ya~QVv~NAkaLA~~L~-~~G~----~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~p 507 (586)
T PLN02271 433 YKAYMQQVKKNAQALASALL-RRKC----RLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISP 507 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCC----eEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCC
Confidence 36888889999999999998 8883 4443333333 55544 577899999999998832
Q ss_pred CC-eEEec-----CCCcccHHHHHHHHHHHhh
Q 015283 382 DG-RISLA-----GLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 382 ~g-Ris~~-----~~~~~~i~~~~~~l~~~l~ 407 (410)
+| ||... ++.+++++++.+.|.++++
T Consensus 508 sGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 508 GGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 34 88533 4578999999999988875
No 289
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=6.5e-15 Score=142.90 Aligned_cols=340 Identities=9% Similarity=0.044 Sum_probs=192.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCcc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|......|+. +|.+.+++.+++..- +... +.......++.+.+++.+... .+.+.+ +++|
T Consensus 56 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG 125 (460)
T PRK06916 56 NEYYDGVSSIWLNVHGHQ--VPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEG------LKKVFY--SDSG 125 (460)
T ss_pred CEEEEcchhHHHhhcCCC--CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCc
Confidence 467888776542344554 588888888887541 1111 112333345666666653221 257888 9999
Q ss_pred hhHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchhh-hhhhCCC------------CccceeeecCC--Cc-------
Q 015283 112 TGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPK--TV------- 163 (410)
Q Consensus 112 t~a~~~~~~~~~~~-----~~g-d~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~--~~------- 163 (410)
++|++.+.++.+.+ .+| .+|+..+.+|.+... .+...|. .+..+|..+.. .+
T Consensus 126 seAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 205 (460)
T PRK06916 126 ATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEI 205 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 99999998888764 233 688888887766432 2221111 11222221000 00
Q ss_pred -ccChhhHHHHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 164 -GLDFEGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 164 -~~d~~~l~~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
.-+++.+++.+...++...++++.. ++...|... +.+-++++.++|++||+++|.||++.+|+-. ...+....+
T Consensus 206 ~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRt---G~~~a~~~~ 282 (460)
T PRK06916 206 VKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRT---GKMFACEHE 282 (460)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcC---chhhHHHhc
Confidence 0135566777765445666666555 466678765 6666999999999999999999999887532 233333222
Q ss_pred hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH---Hh-hccCcccCCChhHHHHHHHH---hCChhh
Q 015283 241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KR-LARPMYSNPPVHGARIVANV---VGNPAL 312 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~a~~~---l~~~~~ 312 (410)
+..++++ +++|.++ .| +.+|.+++ ++++.+.+.... .. ....++. .+.++..++... ++++
T Consensus 283 -gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~l~~l~~~-- 351 (460)
T PRK06916 283 -NVTPDIM---TAGKGLT-GGYLPIAITVT---TDEIYNAFYGDYEEQKTFFHGHSYT-GNPLGCAVALANLELYEKT-- 351 (460)
T ss_pred -CCCCCee---eeehhhh-cCccccceeee---cHHHHHHhhccccccCccccCCCCC-CCHHHHHHHHHHHHHHHhc--
Confidence 2233544 5799998 67 58999755 777555443211 01 1122332 233333443333 3222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C--------------HHHHHHhhhcCc
Q 015283 313 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N--------------KAQSDNMTNKWH 376 (410)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~ll~~~g 376 (410)
...++++++.+++.+.|+ ++.. .+........|.+.-+.+ + ..+...+++ +|
T Consensus 352 ---------~l~~~~~~~g~~l~~~l~-~l~~-~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~G 419 (460)
T PRK06916 352 ---------NLIEQVARKTEYVATQLE-DLFA-LKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRE-LG 419 (460)
T ss_pred ---------cHHHHHHHHHHHHHHHHH-Hhhc-CCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHH-CC
Confidence 234556666666666665 5421 111111122233321111 0 123445554 69
Q ss_pred EEEcCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 377 VYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 377 i~v~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|.+.+.| ||..+ .++++++++++++|.++++++
T Consensus 420 vl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 420 MLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred eEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9999865 66533 359999999999999998764
No 290
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.70 E-value=8.1e-15 Score=141.53 Aligned_cols=340 Identities=12% Similarity=0.052 Sum_probs=188.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-...|+. .|.+.+++.++++.- +...+ .+..-..++.+.+++..... .+.+.+ +++|
T Consensus 46 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~------~~~v~f--~~sG 115 (442)
T PRK13360 46 RRVLDGTAGLWCVNAGHG--RPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG------LNHVFF--TNSG 115 (442)
T ss_pred CEEEECchhHHHhccCCC--CHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCc
Confidence 467888776432234554 588888888877541 11111 11222235555555553211 357888 9999
Q ss_pred hhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhh-hhhhC---------C---CCccceeeec--C-CCccc----
Q 015283 112 TGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKN-IFNDA---------R---VPWSEYRYYD--P-KTVGL---- 165 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~-~~~~~---------g---~~~~~v~~~~--~-~~~~~---- 165 (410)
++|++.+.++.+.+. + ..+|+....+|.+... .+... + ..+..+|... . ..+..
T Consensus 116 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 195 (442)
T PRK13360 116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPE 195 (442)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHH
Confidence 999999988877653 2 2578888888766532 11111 1 1122222210 0 00111
Q ss_pred ----ChhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 166 ----DFEGMIADIKAA-PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 166 ----d~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
..+.+++.+... +++..++++...+...|... +..-+++|.++|++||+++|+||++.+|+-. ...+....
T Consensus 196 ~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Grt---G~~~a~~~ 272 (442)
T PRK13360 196 HGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRL---GAPFAAQY 272 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC---ccchhhhh
Confidence 145667777543 23456666666666677765 4555999999999999999999998888632 12222222
Q ss_pred HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH----hhccCcccCCChhHHHHHHHH---hCChh
Q 015283 240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK----RLARPMYSNPPVHGARIVANV---VGNPA 311 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~a~~~---l~~~~ 311 (410)
.+..++++ +++|.++ .| +.+|.+++ ++++.+.+...-. .....++. .+.++..++... +.++
T Consensus 273 -~gv~PDiv---t~gK~l~-gG~~P~gav~~---~~~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~l~~~- 342 (442)
T PRK13360 273 -FGVTPDLL---TCAKGLT-NGAIPMGAVFV---SSEIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDLYERE- 342 (442)
T ss_pred -cCCCCcee---eeeeccc-cCccceEEEEE---cHHHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHHHHhC-
Confidence 12223433 7899997 45 67888644 7775554432100 01112232 333333333333 2222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C---HHHHHHhhhcCcEEEcC
Q 015283 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N---KAQSDNMTNKWHVYMTK 381 (410)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~ll~~~gi~v~~ 381 (410)
...++.+++.+++.+.|+ ++.....+..+ ...|.+.-+.+ . .....++++ +||++.+
T Consensus 343 ----------~l~~~~~~~g~~l~~~l~-~l~~~~~v~~v-rG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~-~Gvl~~~ 409 (442)
T PRK13360 343 ----------GLLTRAARLAPYWEDALH-SLRDAPHVIDI-RNLGLVGAVELAPRDGKPGKRAYEVFLKCFE-KGLMIRY 409 (442)
T ss_pred ----------CHHHHHHHHHHHHHHHHH-HhhcCCCeeee-eccceEEEEEEecCCCCcchhHHHHHHHHHH-CCcEEEe
Confidence 344566666666777666 54310001111 22233211111 1 133455555 6999987
Q ss_pred CC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 382 DG---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 382 ~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+ ||+.+. .|++++++++++|.++++++
T Consensus 410 ~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 410 TGDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred cCCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 65 887443 49999999999999998764
No 291
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.70 E-value=3.7e-15 Score=143.00 Aligned_cols=342 Identities=10% Similarity=0.041 Sum_probs=188.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc--CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.--...|+. +|.+.+++.+++....... +....-..++.+.+++.... ..+.+.+ +++|
T Consensus 43 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~------~~~~v~f--~~SG 112 (428)
T PRK07986 43 RRLVDGMSSWWAAIHGYN--HPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQ------PLECVFL--ADSG 112 (428)
T ss_pred CEEEEcchhHHhhcCCCC--CHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCC------CcCEEEE--eCCc
Confidence 467888877532344554 5889999888875421111 11222233455555554321 1367888 9999
Q ss_pred hhHHHHHHHHHHHh-----CCCCEEEEcCCCCcchhhh-hhhCCC-------------CccceeeecCC---Cc-ccChh
Q 015283 112 TGSLRLAAALIERY-----FPGAKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYDPK---TV-GLDFE 168 (410)
Q Consensus 112 t~a~~~~~~~~~~~-----~~gd~Vl~~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~~~---~~-~~d~~ 168 (410)
++|++.+.++.+.+ .+..+|+....+|.+.... +...+. .+..++..... .+ .-|++
T Consensus 113 sEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 192 (428)
T PRK07986 113 SVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIA 192 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHH
Confidence 99999998888765 2236888888888664321 111111 11112211000 00 12567
Q ss_pred hHHHHHhcCCCCcEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283 169 GMIADIKAAPGGSFILLHGCA-HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246 (410)
Q Consensus 169 ~l~~~i~~~~~~~~~ii~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 246 (410)
.+++.++..++...++++... +.-.|... ++..+++|.++|++||+++|+||++.+++.. ...+....+ +..++
T Consensus 193 ~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~Grt---G~~fa~~~~-gv~PD 268 (428)
T PRK07986 193 PFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRT---GKLFACEHA-GIAPD 268 (428)
T ss_pred HHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccC---CCeeeeccc-CCCCC
Confidence 777778654445555555442 55556544 5677999999999999999999998777532 222222111 12234
Q ss_pred EEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH-h-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK-R-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
++ .++|.++ .| +.+|.+++ ++++.+.+...-. . ....++. .+.++..++...|+- + ++ +..
T Consensus 269 i~---t~gK~l~-gG~~p~~av~~---~~~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~~--i----~~--~~~ 332 (428)
T PRK07986 269 IL---CLGKALT-GGTMTLSATLT---TREVAETISNGEAGCFMHGPTFM-GNPLACAVANASLSL--L----ES--GDW 332 (428)
T ss_pred EE---Eechhhh-CCcccCcchhc---hHHHHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHHH--H----Hh--CCH
Confidence 44 5899997 67 57777543 7775555432100 0 1122333 333333443333221 0 00 123
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC---eEEec-CCCccc
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RISLA-GLSLAK 394 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g---Ris~~-~~~~~~ 394 (410)
.++.+++.+++.+.|+ ++.....+..+ ...|.+.-+.+ .. .+...+++ +|+++.+.| |+..+ .+|+++
T Consensus 333 ~~~~~~~g~~l~~~l~-~l~~~~~i~~v-Rg~Gl~~~ve~~~~~~~~~~~~~l~~-~Gl~~~~~g~~i~~~Ppl~it~~e 409 (428)
T PRK07986 333 QQQVAAIEAQLREELA-PLRDAPMVADV-RVLGAIGVVETTRPVNMAALQRFFVE-QGVWIRPFGKLIYLMPPYIILPEQ 409 (428)
T ss_pred HHHHHHHHHHHHHHHH-HHhcCCCEEeE-eccceEEEEEeCCcccHHHHHHHHHH-CCcEEEecCCEEEEeCCCCCCHHH
Confidence 4556666666666666 54210001111 22343322222 12 33445554 699999876 66533 249999
Q ss_pred HHHHHHHHHHHhhh
Q 015283 395 CEYLADAIIDSYHN 408 (410)
Q Consensus 395 i~~~~~~l~~~l~~ 408 (410)
+++++++|.+++.+
T Consensus 410 i~~~~~~l~~~l~~ 423 (428)
T PRK07986 410 LQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999864
No 292
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=1.2e-14 Score=139.71 Aligned_cols=339 Identities=12% Similarity=0.049 Sum_probs=191.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CC-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.--...|+. .|.+.+++.+++... +. ..+.......+|.+.+++..... .+.+.+ +++|
T Consensus 44 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~sG 113 (429)
T PRK06173 44 RRLIDGMSSWWAALHGYN--HPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPS------LNKIFF--ADSG 113 (429)
T ss_pred CEEEEccchHHhccCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC------cCEEEE--eCCc
Confidence 467888776532344554 488888888877542 11 11112334456666666654211 368899 9999
Q ss_pred hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCC-------------CccceeeecCC---Cc-ccCh
Q 015283 112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV-------------PWSEYRYYDPK---TV-GLDF 167 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~-------------~~~~v~~~~~~---~~-~~d~ 167 (410)
++|++.+.++.+.+. +| .+|+....+|.+... .+...|. .+..+|..... .+ .-++
T Consensus 114 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 193 (429)
T PRK06173 114 SVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAI 193 (429)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHH
Confidence 999999988887652 33 578888887766421 1111110 11112211000 00 0135
Q ss_pred hhHHHHHhcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 168 EGMIADIKAAPGGSFILLHGCA-HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
+.+++.+...+++...+++... +...|.. ++.+-++++.++|++||+++|+||++.+++-. ...+....+ +..+
T Consensus 194 ~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~Grt---G~~~a~~~~-gv~P 269 (429)
T PRK06173 194 EPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRT---GKLFALEHA-GVVP 269 (429)
T ss_pred HHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcC---CcchHHHhc-CCCC
Confidence 6677777654455666666553 6777776 46666999999999999999999998776532 233322222 2223
Q ss_pred cEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH-h-hccCcccCCChhHHHHHHHH---hCChhhHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK-R-LARPMYSNPPVHGARIVANV---VGNPALFDEWKAE 319 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~ 319 (410)
+++ +++|.++ .| +.++.++. ++++.+.+..... . ...+++. .+.++..++... ++++
T Consensus 270 Div---~~gK~l~-gG~~p~~a~~~---~~~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~i~~~--------- 332 (429)
T PRK06173 270 DIM---CIGKALT-GGYLTLSATIT---TEAIAQTICSGEAKCFMHGPTFM-ANPLACAIAAESIRLLLES--------- 332 (429)
T ss_pred CEE---Eeehhhh-CCccccceEEe---cHHHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhC---------
Confidence 433 4899997 67 46777644 6675554431000 0 1112222 233333333322 2222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec--CC--CH-HHHHHhhhcCcEEEcCCC---eEEecC-C
Q 015283 320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL--NK-AQSDNMTNKWHVYMTKDG---RISLAG-L 390 (410)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~--~~-~~~~~ll~~~gi~v~~~g---Ris~~~-~ 390 (410)
..+++++++.+++.+.|+ ++.. .+........|.+.-+ +. .. .....+++ .||++.+.| ||..+- +
T Consensus 333 --~~~~~~~~~g~~l~~~L~-~~~~-~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e-~Gi~v~~~g~~l~~~Ppl~i 407 (429)
T PRK06173 333 --PWQQNIQRIEAQLKQELA-PAAE-FDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVE-HGIWVRPFGKLVYIMPPFII 407 (429)
T ss_pred --CHHHHHHHHHHHHHHHHH-Hhhc-CCCeeeeeccceEEEEEeCCcccHHHHHHHHHH-CCeEEEecCCEEEEeCCccC
Confidence 235566667777777776 5411 1111111123443222 21 22 33455554 699998876 776543 5
Q ss_pred CcccHHHHHHHHHHHhhh
Q 015283 391 SLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~ 408 (410)
+++++++++++|++++.+
T Consensus 408 t~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 408 SPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999999875
No 293
>PRK07036 hypothetical protein; Provisional
Probab=99.69 E-value=1.1e-14 Score=141.39 Aligned_cols=340 Identities=11% Similarity=0.089 Sum_probs=186.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+|+..|..-...|+. +|.+.+++.+++... +...+ .+.....++.+.+++..... .+.+.+ +++
T Consensus 51 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~s 120 (466)
T PRK07036 51 RRYLDGIGGMWCVNVGYG--REEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGD------LNHVFL--TTG 120 (466)
T ss_pred CEEEECcccHHhhcCCCC--CHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCC
Confidence 467888877532244554 588998888877542 11122 12222334555555443211 357888 999
Q ss_pred hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhhh-hCCC------------CccceeeecC--CCccc----
Q 015283 111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDP--KTVGL---- 165 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~--~~~~~---- 165 (410)
|++|++.+.++.+.+. +| .+|+....+|.+...... ..|. .+..++.... ..++.
T Consensus 121 GseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 200 (466)
T PRK07036 121 GSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAA 200 (466)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHH
Confidence 9999999988876652 22 578888887766542221 1111 1222222110 00111
Q ss_pred ----ChhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 166 ----DFEGMIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 166 ----d~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
..+.+++.+.. .++...++++...+...|... +..-++++.++|++||+++|.||++.+|+-. ...+....
T Consensus 201 ~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~~~~~ 277 (466)
T PRK07036 201 FCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRL---GHFFASEA 277 (466)
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcC---chhhhhhh
Confidence 12344455543 234566666666666677765 4555999999999999999999999888632 22333321
Q ss_pred HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHH-H-H-h-hccCcccCCChhHHHHHH---HHhCChh
Q 015283 240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQ-L-K-R-LARPMYSNPPVHGARIVA---NVVGNPA 311 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~-~-~-~-~~~~~~~~~~~~~~~~a~---~~l~~~~ 311 (410)
..+..++++ +++|.++ .| +.+|.+++ ++++.+.+... . . . ...+++. ...++..++. ..++++
T Consensus 278 ~~gv~PDiv---t~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~Le~i~~~- 348 (466)
T PRK07036 278 VFGIQPDII---TFAKGLT-SGYQPLGAVII---SERLLDVISGPNAKGNVFTHGFTYS-GHPVACAAALKNIEIMERE- 348 (466)
T ss_pred hcCCCCCEE---EEccccc-cCccccEEEEE---cHHHHHHHhcccCcCcccccCCCCC-CCHHHHHHHHHHHHHHHhC-
Confidence 122233444 6799997 67 48898754 77765554321 0 0 0 1112332 3333334433 333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------------C----HHHHHHhhhcC
Q 015283 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------------N----KAQSDNMTNKW 375 (410)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------------~----~~~~~~ll~~~ 375 (410)
...++.+++.++|.+.|+ ++.. .++.......|.+..+.+ + ..+...+++ .
T Consensus 349 ----------~l~~~~~~~g~~l~~~L~-~l~~-~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 415 (466)
T PRK07036 349 ----------GLCEHVREVGPYFEERLA-SLRE-LPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQE-R 415 (466)
T ss_pred ----------CHHHHHHHHHHHHHHHHH-Hhcc-CCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHH-C
Confidence 334455555555555555 4321 111111222333322211 0 122344544 6
Q ss_pred cEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 376 HVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 376 gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
||.+.+.| ||+.+. +|++++++++++|.+++..
T Consensus 416 Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 416 GLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred CcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 99998865 666442 4999999999999988865
No 294
>PLN03032 serine decarboxylase; Provisional
Probab=99.69 E-value=1.1e-14 Score=136.31 Aligned_cols=298 Identities=12% Similarity=0.057 Sum_probs=180.7
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCce--EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR 156 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i--~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 156 (410)
..++.+.+.+++....|.+ ++++ .+ |+|||+|+..+....+...++..|+++.-.|.+....++..|.+++.+|
T Consensus 64 a~~~e~~v~~~ia~llg~~--~~~~~G~f--TsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~ 139 (374)
T PLN03032 64 SRQFEVGVLDWFARLWELE--KDEYWGYI--TTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVP 139 (374)
T ss_pred HHHHHHHHHHHHHHHhCCC--CccCCEEE--eCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEee
Confidence 4566666666655555432 4555 77 9999999988754444444667899999999999999999999988898
Q ss_pred eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC-----CcccccccCCCCCCCCCC
Q 015283 157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-----HIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~-----~~li~Deay~~~~~~~~~ 231 (410)
. ..++.+|++.|++.+.+....+.+++.+..+|+||. .+++++|+++|+++| +++.+|.+|.++... ..
T Consensus 140 ~--d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~---idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p-~~ 213 (374)
T PLN03032 140 T--LPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGA---VDDLDRILRILKELGYTEDRFYIHCDGALFGLMMP-FV 213 (374)
T ss_pred e--CCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCcc---CCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhh-cc
Confidence 8 456789999999999864335677777778999999 566778888899996 589999998664321 11
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC-cccCCChhHHHHHH--HHhC
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP-MYSNPPVHGARIVA--NVVG 308 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~--~~l~ 308 (410)
.....+. + ...-+.+..|.+|.++.| ..+|.+++ .+...+.+.....-+... .+...+.-+..++. ..|+
T Consensus 214 ~~~~~~~-~--~~~vDSis~s~HK~~g~P-~g~G~ll~---r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~ 286 (374)
T PLN03032 214 SRAPEVT-F--RKPIGSVSVSGHKFLGCP-MPCGVALT---RKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLR 286 (374)
T ss_pred CCCcccC-C--CcCCcEEEECcccccCCC-cCeEEEEE---EchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHH
Confidence 1000111 1 112455677999988733 45688754 334333322111100000 11112221112221 1111
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCC-eEEe
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG-RISL 387 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g-Ris~ 387 (410)
.. -.+.+.+..++..++.+++.+.|+ +.+. .....|......|..-..+ .+.++..+...+.. |+++
T Consensus 287 ~~-----G~~g~~~~~~~~~~~a~~l~~~l~-~~~~---~~~~~p~~~~V~f~~~~~~---~~~~~w~l~~~~~~~hi~v 354 (374)
T PLN03032 287 RK-----GYRGIKRDVQHCMRNAHYLKDRLT-EAGL---TCRLNELSSTVVFERPMDE---AFIKKWQLACEGDIAHVVV 354 (374)
T ss_pred Hh-----CHHHHHHHHHHHHHHHHHHHHHHH-hCCC---cEEECCCceEEEEcCCCcH---hHhheeeecccCCEEEEEE
Confidence 11 134557788888889999999998 7763 1234455444444322222 12233333333333 7775
Q ss_pred cC-CCcccHHHHHHHHHHH
Q 015283 388 AG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 388 ~~-~~~~~i~~~~~~l~~~ 405 (410)
.. .+.+.++++++.|+++
T Consensus 355 m~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 355 MPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred CCCCCHHHHHHHHHHHhcc
Confidence 54 5778899999888763
No 295
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=7e-15 Score=142.66 Aligned_cols=339 Identities=9% Similarity=0.043 Sum_probs=192.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCc--cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~--~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+|+..|..-...|+. +|.+.+++.+++... +.. .| ......++.+.+++..... .+.+.+ +++
T Consensus 47 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~~s 115 (466)
T PRK07030 47 KRYLDAVSSWWVNVFGHA--NPRINQRIKDQVDQLEHVILAGF-SHEPVIELSERLVKITPPG------LSRCFY--ADN 115 (466)
T ss_pred CEEEEcchhHHhhcCCCC--CHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHHhCCCC------cCEEEE--eCC
Confidence 467888877542344554 588888888877542 111 22 2223345555555543211 357888 999
Q ss_pred hhhHHHHHHHHHHHh----C-C-CCEEEEcCCCCcchhhh-hhhCCC------------CccceeeecCC--Ccc-----
Q 015283 111 GTGSLRLAAALIERY----F-P-GAKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPK--TVG----- 164 (410)
Q Consensus 111 gt~a~~~~~~~~~~~----~-~-gd~Vl~~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~--~~~----- 164 (410)
|++|++.+.++.+.+ . + ..+|+....+|.+.... +...|. .+..+|..+.. ..+
T Consensus 116 GsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~ 195 (466)
T PRK07030 116 GSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEE 195 (466)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHH
Confidence 999999998887654 1 2 35788888877665322 211111 11222221100 000
Q ss_pred ---cChhhHHHHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 165 ---LDFEGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 165 ---~d~~~l~~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
-+++.+++.+.+.++....+++.. .+...|... +..-++++.++|++||+++|.||++.+|+-. ...+....
T Consensus 196 ~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRt---G~~~a~~~ 272 (466)
T PRK07030 196 HSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRT---GTMFACEQ 272 (466)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcc---ccchHHHh
Confidence 124556777765445566666554 366667755 4555999999999999999999999988732 23333322
Q ss_pred HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHHH---HhCChh
Q 015283 240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVAN---VVGNPA 311 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~---~l~~~~ 311 (410)
+ +..++++ .++|.++ .| +.+|.+++ ++++.+.+..... . ...+++. ...++..++.. .+.++
T Consensus 273 ~-gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~h~~T~~-gnpla~aaa~a~L~~i~~~- 342 (466)
T PRK07030 273 A-GIRPDFL---CLSKALT-GGYLPLAAVLT---TDTVYQAFYDDYPTLRAFLHSHSYT-GNPLACAAALATLDIFEQD- 342 (466)
T ss_pred c-CCCCCEE---eeehhcc-CCcccceEEEe---cHHHHHHHhcccccccccccCCCCC-CCHHHHHHHHHHHHHHHhc-
Confidence 2 3334555 4699998 68 48898755 7776555432110 0 1222332 33333344333 33332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------------C----HHHHHHhhhcC
Q 015283 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------------N----KAQSDNMTNKW 375 (410)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------------~----~~~~~~ll~~~ 375 (410)
...++.++..+++.+.|+ ++. ..+........|.+.-+.+ + ..+..++++ +
T Consensus 343 ----------~l~~~~~~~G~~l~~~L~-~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 409 (466)
T PRK07030 343 ----------NVIENNRALARRMAEATA-HLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALE-R 409 (466)
T ss_pred ----------CHHHHHHHHHHHHHHHHH-HHh-cCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHH-C
Confidence 334555556666666665 442 1111111223344322221 0 123445555 6
Q ss_pred cEEEcCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 376 HVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 376 gi~v~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|+.+.+.| |+..+ ..+++++++++++|.++++++
T Consensus 410 Gvl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 410 GALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 99998865 66533 359999999999999998764
No 296
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.69 E-value=9.2e-15 Score=142.76 Aligned_cols=341 Identities=15% Similarity=0.091 Sum_probs=186.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|.--...|+. +|.+.+++.+++.... ...+ .+.....++.+.+.+.+... ..+.+.+ +++
T Consensus 89 ~~ylD~~sg~~~~~lGh~--hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~-----~~~~v~f--~~S 159 (504)
T PLN02760 89 KKYLDALAGLWCTALGGS--EPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTAR-----KMGKVFF--TNS 159 (504)
T ss_pred CEEEEcCcCHHhcccCCC--CHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCC-----CCCEEEE--eCC
Confidence 567898887532355554 5889999888875421 1111 11222334444444442211 1257888 899
Q ss_pred hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCCC------------ccceeeecCCC----c----
Q 015283 111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPKT----V---- 163 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~----~---- 163 (410)
|++|++.+.++.+.+. +| .+|+..+-+|.+..- .+...|.. +..++...... .
T Consensus 160 GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 239 (504)
T PLN02760 160 GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEE 239 (504)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHH
Confidence 9999999988776542 23 578888877765532 22212211 11111100000 0
Q ss_pred ---ccChhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 164 ---GLDFEGMIADIKA-APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 164 ---~~d~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
....+++++.+.. .++...+|++...+.-.|.+.+ ..-+++|.++|++||+++|.||++.+|+-. ...+...
T Consensus 240 ~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRt---G~~~a~e 316 (504)
T PLN02760 240 EFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRL---GTMFGCD 316 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCccc---chhhHHH
Confidence 0012446666642 2334566666666666677654 555999999999999999999999888632 2233332
Q ss_pred HHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHHHH---hCCh
Q 015283 239 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVANV---VGNP 310 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~~---l~~~ 310 (410)
.+ +..+++ .+++|.+| .| +.+|.+++ ++++.+.+..... . ....+++ .+.++..++... +.++
T Consensus 317 ~~-gv~PDi---vtlgK~lg-gG~~PigAv~~---~~~i~d~~~~~~~~~~~~~h~~T~~-gnPl~~Aaala~Le~i~~~ 387 (504)
T PLN02760 317 KY-NIKPDL---VSLAKALS-SAYMPIGAVLV---SPEISDVIHSQSNKLGSFAHGFTYS-GHPVSCAVALEALKIYKER 387 (504)
T ss_pred hc-CCCCcE---EEeccccc-CCccccceEee---cHHHHhhhhcccccccCcccCCCCC-CCHHHHHHHHHHHHHHHhC
Confidence 22 222343 47899997 45 57888644 6775555432110 0 1222333 233333443333 3222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------------C---H-HHHHHhhhc
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------------N---K-AQSDNMTNK 374 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------------~---~-~~~~~ll~~ 374 (410)
...++.+++.++|.+.|+ ++. ..++.......|.+.-+.+ + . .+...+++
T Consensus 388 -----------~l~~~~~~~g~~l~~~L~-~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~- 453 (504)
T PLN02760 388 -----------NIPEHVNKIAPRFQDGIK-AFS-GSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKK- 453 (504)
T ss_pred -----------CHHHHHHHHHHHHHHHHH-HHh-cCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHh-
Confidence 334555566666666665 441 1111111122233322111 0 1 12345554
Q ss_pred CcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 375 WHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 375 ~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+||.+.+.| ||+.+. .|+++++++++++.+++..+
T Consensus 454 ~Gvl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 454 RGMLVRVAGDNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred CCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 699998866 777542 49999999999999998754
No 297
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.69 E-value=5.2e-15 Score=141.55 Aligned_cols=335 Identities=11% Similarity=0.060 Sum_probs=199.0
Q ss_pred ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-----
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY----- 125 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~----- 125 (410)
.++.|.+.+++...++... ..+.......++.+.+.+++.+..|.+-..+++.+.-|+|||+|+.++....+..
T Consensus 51 t~~~p~~~~~~~~~l~~~~-~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~ 129 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNM-IDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM 129 (431)
T ss_pred CCCCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence 3346778888877775332 2222222334666666666665555421113454433799999999875333211
Q ss_pred -CCC-----CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCH
Q 015283 126 -FPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP 199 (410)
Q Consensus 126 -~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~ 199 (410)
..| ..|++++-.|.++...++..|.+++.+|..+ +++.+|++.|++.+.+ .+.+++.+..+|.||. .
T Consensus 130 ~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~---~t~lV~~t~g~t~tG~---i 202 (431)
T TIGR01788 130 EAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDE---NTIGVVCILGTTYTGE---Y 202 (431)
T ss_pred HhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhh---CCeEEEEEeCCCCCcc---c
Confidence 112 3688899999999999988899999998842 3457999999999986 6778888889999999 5
Q ss_pred HHHHHHHHHHHHc------CCcccccccCCCCCCC-CCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEe
Q 015283 200 EQWEKIADVIQEK------NHIPFFDVAYQGFASG-SLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVC 271 (410)
Q Consensus 200 ~~l~~i~~~~~~~------~~~li~Deay~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~ 271 (410)
+++++|+++|+++ |+++.+|.+|.++... ......+.+ ....-+.+..|.+|.+ ++.| +|.+++
T Consensus 203 dpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~----~~~~~DSis~s~HK~~~~P~g--~G~l~~-- 274 (431)
T TIGR01788 203 EDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDF----RLPRVKSINVSGHKYGLVYPG--VGWVIW-- 274 (431)
T ss_pred CCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhc----CCCCceEEEECchhccCCCCC--cEEEEE--
Confidence 5667777789999 9999999998854310 000111111 1223456777999976 6655 688744
Q ss_pred CCchhH-HHHHHHHHhhccC----cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283 272 SSSDLA-ARVKSQLKRLARP----MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 272 ~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 346 (410)
++++.. +.+... ..+... .....+.-+..++..++. +...-.+.++++.++..++.+++.+.|+ +.+.
T Consensus 275 r~~~~l~~~~~~~-~~yl~~~~~~~t~~~sR~g~~al~~w~~---l~~lG~~G~~~i~~~~~~la~~l~~~L~-~~~~-- 347 (431)
T TIGR01788 275 RDEEALPEELIFH-VNYLGGDEPTFTLNFSRPANQVIAQYYN---FLRLGREGYRKIMQNSLDVARYLAEEIA-KLGP-- 347 (431)
T ss_pred eChHHcchhheec-ccccCCCCCCcceecCchHHHHHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHH-hCCC--
Confidence 333211 111100 001110 001111111122211211 1111124567888888889999999998 7752
Q ss_pred Cccccc--CCcceeeec--C-----CCHHHHHHhhhcCcEEE----cCC---C----eEEec-CCCcccHHHHHHHHHHH
Q 015283 347 DWSFIL--RQIGMFSFT--G-----LNKAQSDNMTNKWHVYM----TKD---G----RISLA-GLSLAKCEYLADAIIDS 405 (410)
Q Consensus 347 ~~~~~~--~~~~~~~~~--~-----~~~~~~~~ll~~~gi~v----~~~---g----Ris~~-~~~~~~i~~~~~~l~~~ 405 (410)
+++.. +..+...|- + .+...+.+.|.+.|+.+ .|. | |+++. ..+++.++.+++.|+++
T Consensus 348 -~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~ 426 (431)
T TIGR01788 348 -FEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAA 426 (431)
T ss_pred -EEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 44443 244444332 2 33333334444569863 332 2 88764 35788999999999999
Q ss_pred hhhc
Q 015283 406 YHNV 409 (410)
Q Consensus 406 l~~~ 409 (410)
+..+
T Consensus 427 ~~~~ 430 (431)
T TIGR01788 427 LAYL 430 (431)
T ss_pred HHhh
Confidence 8765
No 298
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.69 E-value=1.4e-14 Score=139.89 Aligned_cols=343 Identities=13% Similarity=0.065 Sum_probs=191.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|.--...|+. +|.+.+++.+++..- +...+ .......++.+.+++..... .+.+.+ +++|
T Consensus 49 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~------~~~v~f--~~sG 118 (445)
T PRK09221 49 RKILDGTAGLWCCNAGHG--RPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGG------LDHVFF--TNSG 118 (445)
T ss_pred CEEEEccccHhhccCCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCc
Confidence 467888877432244554 588888888877541 11111 12222335555555553211 357899 9999
Q ss_pred hhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhhh-hhhCC------------CCccceeeec-CC--Cccc----
Q 015283 112 TGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYD-PK--TVGL---- 165 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~-~~--~~~~---- 165 (410)
++|++.+.++.+.+. + ..+|+....+|.+.... +...| ..+..+|... .. .+..
T Consensus 119 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
T PRK09221 119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPE 198 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHH
Confidence 999999988877653 1 25788888887655321 11111 0112222210 00 0000
Q ss_pred ----ChhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 166 ----DFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 166 ----d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
..+.+++.+...+ ++..++++...+...|...+. +-++++.++|++||+++|+||++.+|+-. ...+....
T Consensus 199 ~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt---G~~~~~~~ 275 (445)
T PRK09221 199 HGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRL---GAAFAAER 275 (445)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcC---chhhHHHh
Confidence 1346667676432 455666666667777876654 44999999999999999999998887632 22333322
Q ss_pred HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH---h-hccCcccCCChhHHHHHHHHhCChhhHH
Q 015283 240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVANVVGNPALFD 314 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 314 (410)
+ +..++++ +++|.++ .| +.+|.+++ ++++.+.+...-. . ....++. .+.++..++...|+--
T Consensus 276 ~-gv~PDi~---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~~~~T~~-~~pl~~aaa~a~L~~i---- 342 (445)
T PRK09221 276 F-GVTPDII---TFAKGLT-NGAIPMGAVIA---SDEIYDAFMQGPEYAIEFFHGYTYS-AHPVACAAGLATLDIY---- 342 (445)
T ss_pred c-CCCCCEE---Eeccccc-cCcccceeeEE---cHHHHHhhccCcccccccccccCCC-cCHHHHHHHHHHHHHH----
Confidence 2 2223433 7899997 45 67888644 7776555432100 0 1112333 3333333333332210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C---HHHHHHhhhcCcEEEcCCC-
Q 015283 315 EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N---KAQSDNMTNKWHVYMTKDG- 383 (410)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~ll~~~gi~v~~~g- 383 (410)
++ +...++.+++.+++.+.|+ ++.....+..+ ...|.+.-+.+ . ....+++++ .||.+.+++
T Consensus 343 --~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~v~~v-rg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~ 415 (445)
T PRK09221 343 --RE--EDLFERAAELAPYFEDAVH-SLKGLPHVIDI-RNIGLVAGIELAPRPGAPGARGYEAFMKCFE-KGLLVRYTGD 415 (445)
T ss_pred --Hh--ccHHHHHHHHHHHHHHHHH-hhccCCCEEEE-ecCceEEEEEEecccccccchHHHHHHHHHH-CCeEEeecCC
Confidence 00 1345566777777777776 55210011111 22233322211 1 123455555 699998776
Q ss_pred --eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 384 --RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 --Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+.+. .|++++++++++|++++.++
T Consensus 416 ~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 416 TIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 887443 49999999999999998764
No 299
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=9.2e-15 Score=140.35 Aligned_cols=157 Identities=21% Similarity=0.181 Sum_probs=119.7
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPW 152 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~ 152 (410)
....++++.++++.... ..++ +++||.|+.+++ ...+.+||+|+++...|.+....+ ...|.++
T Consensus 64 p~~~~le~~lA~l~g~~--------~av~--~sSGt~Al~~al--~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v 131 (433)
T PRK08134 64 PTVAVLEERVAALEGGV--------GAIA--TASGQAALHLAI--ATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIET 131 (433)
T ss_pred hHHHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHHH--HHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEE
Confidence 44789999999996432 3455 799999999884 444789999999999998764443 4578888
Q ss_pred cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283 153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 232 (410)
Q Consensus 153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 232 (410)
+.++. + |++.+++.+++ +++++++.+|+||||.+.+ +++|+++|+++|+++|+|.++......
T Consensus 132 ~~vd~---~----d~~~l~~~i~~---~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~---- 194 (433)
T PRK08134 132 TFVKP---G----DIDGWRAAIRP---NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL---- 194 (433)
T ss_pred EEECC---C----CHHHHHHhcCC---CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 88775 1 78999998875 7788888899999999654 677788899999999999996532211
Q ss_pred chhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
. ++ ..+.++++.|.+|.++.+|-.+|.+++
T Consensus 195 ~--pl-----~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 R--PF-----EHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred C--ch-----hcCCCEEEeccccccCCCCCceEEEEE
Confidence 1 11 224678899999999888877777643
No 300
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.68 E-value=5.9e-16 Score=130.29 Aligned_cols=167 Identities=22% Similarity=0.154 Sum_probs=121.9
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh-hhhhhCCCCccceee
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVPWSEYRY 157 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~v~~ 157 (410)
..++++.+++++. .+.+++++ ++|||+++.++.+.+ ..+|++|+++.++|+++. ..+...|++++.++.
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~--~~~~t~a~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~ 71 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVF--VPSGTGANEAALLAL--LGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPV 71 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEE--eCCcHHHHHHHHHHh--CCCCCEEEEeecccceehhhHHHhcCCEEEEecc
Confidence 3578999999974 12567888 889999999984333 457999999999999888 788889999998887
Q ss_pred ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh
Q 015283 158 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 237 (410)
Q Consensus 158 ~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 237 (410)
.+......+.+.+++... .+++.++++++++||+|...+. ++|.++|+++|+++|+|++|..+..... ..
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~---~~-- 141 (170)
T cd01494 72 DDAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAP---GV-- 141 (170)
T ss_pred CCCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEeccccccccccc---cc--
Confidence 433222233334444332 2467888889999999997765 6777779999999999999988775310 00
Q ss_pred HHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 238 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
. ....+.++++.|++|.++. .++|++++
T Consensus 142 -~-~~~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 142 -L-IPEGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred -c-cccccCCEEEEEcccccCC--CceEEEEe
Confidence 0 1123467888999999975 66899753
No 301
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.68 E-value=3.7e-15 Score=140.65 Aligned_cols=312 Identities=14% Similarity=0.043 Sum_probs=177.9
Q ss_pred CcccccHHHHHHHHHhhcc---CCCccCcCC-------cccHHHHHHHHHHhcCCCCCcccCCceEEEecCC-hhhHHHH
Q 015283 49 LQPYVLDVVKKAENLMLER---GENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRL 117 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~---~~~~~y~~~-------~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g-gt~a~~~ 117 (410)
|+..+|+.|++++.+.+.. .....|... .-+.+.|+.+++++... +++++++ +.| ||++++.
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~-----~~~~vvf--~~gs~T~a~~~ 78 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIP-----DNYKVLF--LQGGATGQFAA 78 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCceEEE--EcCCchHHHHH
Confidence 5566789999999887621 011122211 33568888899987532 1567888 877 9999999
Q ss_pred HHHHHHHhC---CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH-HHHHhcCCCCcEEEEeCCCCCCC
Q 015283 118 AAALIERYF---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM-IADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 118 ~~~~~~~~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l-~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
+ +.+.+. +||.|++ .+.......+++..|.+++.++..+ ++...+..++ +..++ +++.++.+++..|.|
T Consensus 79 ~--~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~-~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~t 151 (355)
T cd00611 79 V--PLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKE-EGKYTKIPDVETWDLA---PDAAYVHYCSNETIH 151 (355)
T ss_pred H--HHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEeccc-ccCCCCCCCHhhcCCC---CCCCEEEEeCCcccc
Confidence 8 344455 4444443 2222223336788899988888632 1111132222 22233 366777888999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|...+ ++++.||+++++|.+ +.++..+.+.+ . . + +.+.|..|.+|++|+ |.+++ +
T Consensus 152 G~~~~--------~i~~~~g~~~~VDa~-qs~g~~~idv~-----~----~-~-~~~ss~~K~lGP~G~--g~l~~---~ 206 (355)
T cd00611 152 GVEFD--------EVPDTGGVPLVADMS-SNILSRPIDVS-----K----F-G-VIYAGAQKNLGPAGV--TVVIV---R 206 (355)
T ss_pred cEEcc--------eecccCCCeEEEEcc-ccccCCCCCHH-----H----h-C-EEEeecccccCCCce--EEEEE---C
Confidence 99532 335569999999999 54443222211 1 1 2 345667999998875 77655 7
Q ss_pred chhHHHHHHHH------Hh-hccC-cccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcc-C
Q 015283 274 SDLAARVKSQL------KR-LARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKD-K 343 (410)
Q Consensus 274 ~~~~~~~~~~~------~~-~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~-g 343 (410)
++..+++.... .. .... ...+|+..+..++...|+- . ... .++++.++.+++.+++.+.|+ ++ |
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~---l--~~~gg~e~i~~~~~~l~~~l~~~l~-~~~g 280 (355)
T cd00611 207 KDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKW---L--KEQGGVEAMEKRNRQKAQLLYDTID-NSNG 280 (355)
T ss_pred HHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHH---H--HHcCCHHHHHHHHHHHHHHHHHHHH-hCcc
Confidence 77665543211 00 0111 1223433333333333221 1 012 257888999999999999999 88 5
Q ss_pred CCCCcccccCCcce-eeec--CCC-HHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHH
Q 015283 344 SGKDWSFILRQIGM-FSFT--GLN-KAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 344 ~~~~~~~~~~~~~~-~~~~--~~~-~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~ 405 (410)
+...........+. ..|. +.. .+.....+.+.|+++.++ | |+|+.. .|++|++++++.|+++
T Consensus 281 l~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 281 FYRGPVDKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ccccCCCHHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 31000000112212 2222 220 122322334579985444 2 999765 4899999999999885
No 302
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.68 E-value=9.4e-15 Score=136.88 Aligned_cols=310 Identities=14% Similarity=0.023 Sum_probs=183.1
Q ss_pred ccHHHHHHHHHhhcc---CCCccCcCCc-------ccHHHHHHHHHHhcCCCCCcccCCceEEEecCC-hhhHHHHHHHH
Q 015283 53 VLDVVKKAENLMLER---GENKEYLPIE-------GLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRLAAAL 121 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~---~~~~~y~~~~-------g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g-gt~a~~~~~~~ 121 (410)
+|..|++++.+.+.. .+...|.... -+.+.++.+++++... +..++++ +.| ||++++.+ +
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-----~~~~v~~--~~gsgT~a~ea~--~ 73 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-----DNYEVLF--LQGGATGQFAAV--P 73 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-----CCceEEE--EcCCchHHHHHH--H
Confidence 367888888777642 1212232211 2345566666665321 1345766 655 99999998 5
Q ss_pred HHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeec--CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCC
Q 015283 122 IERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYD--PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP 197 (410)
Q Consensus 122 ~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~ 197 (410)
.+.+.+||++++..-+..+. .++++.+|. +..+...+ +++..+++++++. + ++..++.+++..|.||+..
T Consensus 74 ~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~v~~th~ETstGv~~ 147 (349)
T TIGR01364 74 LNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S---EDAAYVHYCANETIHGVEF 147 (349)
T ss_pred HhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C---CCCCEEEEcCCCCcccEec
Confidence 55566999988877655433 567778888 66665421 1223455555442 2 2566777788899999965
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhH
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA 277 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~ 277 (410)
+ ++++.+++++++|.+ +.++..+.+.+ . .+ +++.|..|.+|+||+ |.+++ +++.+
T Consensus 148 ~--------~l~~~~~~l~iVDav-ss~g~~~id~~-----~----~d--~~~~ssqK~lgP~Gl--g~l~~---s~~~~ 202 (349)
T TIGR01364 148 R--------ELPDVKNAPLVADMS-SNILSRPIDVS-----K----FG--LIYAGAQKNIGPAGL--TVVIV---RKDLL 202 (349)
T ss_pred c--------eecccCCCeEEEEcc-ccccCccCCHH-----H----cc--EEEEecccccCCCce--EEEEE---CHHHH
Confidence 4 456678999999999 55553322211 1 12 788888999998885 77655 77776
Q ss_pred HHHHHHH------Hh-hc-cCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC-CCCC
Q 015283 278 ARVKSQL------KR-LA-RPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK-SGKD 347 (410)
Q Consensus 278 ~~~~~~~------~~-~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~ 347 (410)
+++.... .. .. ...+.+|+.....++...|+.- ..+ .++++.++.+++.+++.+.|+ +++ +...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l-----~~~gG~e~i~~r~~~l~~~l~~~l~-~~~gl~~~ 276 (349)
T TIGR01364 203 GRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWL-----KEQGGVKAIEKRNQAKAQLLYDTID-NSNGFYRN 276 (349)
T ss_pred hhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHH-----HHcCCHHHHHHHHHHHHHHHHHHHH-hCCCeecc
Confidence 6543211 10 00 1112244444333333333211 022 267888999999999999999 884 3111
Q ss_pred cccccCCc-ceeee--cCCC-HHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 348 WSFILRQI-GMFSF--TGLN-KAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 348 ~~~~~~~~-~~~~~--~~~~-~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
.......+ ....+ .+.. .+.+...+.+.|+++.++ | |+|+.. .+.+|++.+++.|++++++
T Consensus 277 ~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 277 PVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 11000112 22222 2221 123323445579977666 3 999665 4899999999999998765
No 303
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=1.4e-14 Score=138.94 Aligned_cols=158 Identities=18% Similarity=0.113 Sum_probs=113.8
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCCCc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPW 152 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~ 152 (410)
.....|++.++++... +..++ +++|+.|+..+ +...+.+||+|+++...|.+.... +...|.++
T Consensus 69 p~~~~Le~~lA~l~g~--------~~av~--~sSG~aAi~~a--l~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v 136 (436)
T PRK07812 69 PTQDVVEQRIAALEGG--------VAALL--LASGQAAETFA--ILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEV 136 (436)
T ss_pred chHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEE
Confidence 3467899999988533 23444 68999998887 455578999999999888775543 34466666
Q ss_pred cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283 153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 232 (410)
Q Consensus 153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 232 (410)
+.++ +. .|++.+++.+++ ++++|++.+|+||+|.+. ++++|+++|+++|+++|+|+++..... .
T Consensus 137 ~~vd--d~----~d~e~l~~ai~~---~tklV~ie~~sNp~G~v~---Dl~~I~~la~~~gi~liVD~t~a~~~~----~ 200 (436)
T PRK07812 137 SFVE--DP----DDLDAWRAAVRP---NTKAFFAETISNPQIDVL---DIPGVAEVAHEAGVPLIVDNTIATPYL----I 200 (436)
T ss_pred EEEC--CC----CCHHHHHHhCCC---CCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCccccc----C
Confidence 6553 11 278888888874 678888899999999955 566777779999999999999653221 1
Q ss_pred chhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
. + . ..+.++++.|++|.+|..|--+|++++
T Consensus 201 ~--p----l-~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 201 R--P----L-EHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred C--c----h-hcCCCEEEEecccccCCCCCeEEEEEE
Confidence 1 1 1 123567789999999877766777743
No 304
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=2e-14 Score=139.47 Aligned_cols=341 Identities=11% Similarity=0.052 Sum_probs=187.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|.--...|+. .|.+.+++.+++.. .+. ..+ +..-..++.+.+++.+....+. ...+.+.+ +++
T Consensus 64 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~~~~-~~~~~v~f--~~s 137 (472)
T PRK08742 64 RRYLDAVSSWWTNLFGHA--EPRIGAAIAAQAGELEQVMLAGF-THEPAVQLAEQLLAIAPRQDGR-APLSKVFY--ADN 137 (472)
T ss_pred CEEEEcCccHHhccCCCC--CHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhCCCcccC-CCCCEEEE--eCC
Confidence 467888877542344654 58888888877643 111 122 2222345555555554221100 01357889 999
Q ss_pred hhhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchhhhhh-hCCC------------CccceeeecCC--Ccc-----
Q 015283 111 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPK--TVG----- 164 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~-gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~--~~~----- 164 (410)
|++|++.+.++.+.+. + ..+|+..+.+|.+...... ..|. .+..+|..+.. .++
T Consensus 138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED 217 (472)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence 9999999998887662 2 2688888887766542221 1111 11222221100 001
Q ss_pred ---cChhhHHHHHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 165 ---LDFEGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 165 ---~d~~~l~~~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
-+++.+++.+...++....+++.. .++-.|..+ +..-++++.++|++||+++|.||++.+|+-. ...+....
T Consensus 218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRt---G~~~a~e~ 294 (472)
T PRK08742 218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRT---GTLFACEQ 294 (472)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC---ccchHHHh
Confidence 124566666754444566666555 366778755 5556999999999999999999999998742 23444333
Q ss_pred HhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH--h-hccCcccCCChhHHHHH---HHHhCChhh
Q 015283 240 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK--R-LARPMYSNPPVHGARIV---ANVVGNPAL 312 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~a---~~~l~~~~~ 312 (410)
+ +..++++ .++|.++ .| +.+|.+++ ++++.+.+..... . ...+++. ...++..++ ...++++++
T Consensus 295 ~-gv~PDiv---~~gKgl~-gG~~Plaav~~---~~ei~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa~a~L~~i~~~~l 365 (472)
T PRK08742 295 A-GVMPDLL---CLSKGLT-GGFLPLSAVLA---TQQLYDAFLDDSRERAFLHSHSYT-GNPLACAAALATLDIFADDDV 365 (472)
T ss_pred c-CCCCCEE---EEccccc-CCCCCcceeec---cHHHHHHhhccCccCccCcCCCCC-ccHHHHHHHHHHHHHHHHCCH
Confidence 2 3334555 4699997 67 48888654 7775554422100 0 1222333 233333333 333433332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhh
Q 015283 313 FDEWKAEMEMMAGRIKNVRQKLFDS---LSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTN 373 (410)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~---l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~ 373 (410)
.++.++..+++.+. ++ +.+. +..+.. .|.+.-+.+ . ....+++++
T Consensus 366 -----------~~~~~~~g~~l~~~~~~~~-~~~~---i~dvRG-~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (472)
T PRK08742 366 -----------IARNQPTAARMTQLAAQIG-EHPH---VADVRQ-AGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALA 429 (472)
T ss_pred -----------HHHHHHHHHHHHHHHHHHh-cCCC---eeeEec-cceEEEEEeccCccccccCCchhHHHHHHHHHHHH
Confidence 22222333333322 33 3321 112222 333322211 0 112445555
Q ss_pred cCcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 374 KWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 374 ~~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.||.+.+.| ||..+- ++++++++++++|.++++++
T Consensus 430 -~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 430 -RGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred -CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 699998876 776442 49999999999999998763
No 305
>PRK12403 putative aminotransferase; Provisional
Probab=99.68 E-value=2.1e-14 Score=139.33 Aligned_cols=341 Identities=13% Similarity=0.042 Sum_probs=179.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|..-...|+. +|.+.+++.+++... +...+ .+.....++.+.+++++... .+.+.+ +++
T Consensus 54 ~~ylD~~~g~~~~~lGh~--hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S 123 (460)
T PRK12403 54 KRYLDGMSGLWCTNLGYG--RKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGH------YSHAIY--TNS 123 (460)
T ss_pred CEEEECchhHHhhcCCCC--CHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCC
Confidence 467888777543345664 588999988887542 11111 12223445666666664221 267888 999
Q ss_pred hhhHHHHHHHHHHHh-----CCCCE-EEEcCCCCcch-hhhhhhCCCC-----------ccceeeecC--CCccc-----
Q 015283 111 GTGSLRLAAALIERY-----FPGAK-VLISSPTWGNH-KNIFNDARVP-----------WSEYRYYDP--KTVGL----- 165 (410)
Q Consensus 111 gt~a~~~~~~~~~~~-----~~gd~-Vl~~~p~y~~~-~~~~~~~g~~-----------~~~v~~~~~--~~~~~----- 165 (410)
|++|++.+.++.+.+ .+++. |+...-+|.+. ...+...|.. +..+|.... ..+..
T Consensus 124 GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (460)
T PRK12403 124 GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEF 203 (460)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 999999998888765 13344 44444555443 2222222211 112221000 00000
Q ss_pred ---ChhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 166 ---DFEGMIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 166 ---d~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
+.+.+++.+.+ .++...++++...+.-.|... +.+-++++.++|++||+++|.||++.+|+-. ...+....+
T Consensus 204 ~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRt---G~~~a~e~~ 280 (460)
T PRK12403 204 GRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRT---GEWFAHEHF 280 (460)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---chhhhhhhc
Confidence 12445555532 223455666555566667765 4555999999999999999999999887632 223332222
Q ss_pred hhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhh-ccCcccCCChhHHHHH---HHHhCChhhHHH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIV---ANVVGNPALFDE 315 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a---~~~l~~~~~~~~ 315 (410)
+-.++++ .++|.++ .|. .+|.+++ ++++.+.+...-... ..+++. .+.++..++ ...+++++
T Consensus 281 -gv~PDiv---~~gK~lg-gG~~Piga~v~---~~~i~~~~~~~~~~~~~~~T~~-gnPl~~Aaala~L~~i~~~~---- 347 (460)
T PRK12403 281 -GFEPDTL---SIAKGLT-SGYVPMGGLVL---SKRIAEALVEQGGVFAHGLTYS-GHPVAAAVAIANLKALRDEG---- 347 (460)
T ss_pred -CCCCCeE---EEccccc-ccccceEEEEE---CHHHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHHHHHhcc----
Confidence 2223444 4899998 574 8888744 667544443210111 112222 333333333 33333332
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------CH--HH----HHHhhhcCcEE
Q 015283 316 WKAEMEMMAGRIK-NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------NK--AQ----SDNMTNKWHVY 378 (410)
Q Consensus 316 ~~~~~~~~~~~~~-~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~~--~~----~~~ll~~~gi~ 378 (410)
..++.+ ++.+++.+.|+ ++-...++.......|.+.-+.+ .. .. ...+++ .|+.
T Consensus 348 -------l~~~~~~~~g~~l~~~L~-~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll 418 (460)
T PRK12403 348 -------VVTRVKDDTGPYLQRCLR-EVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFE-EGVI 418 (460)
T ss_pred -------HHHHHHHHHHHHHHHHHH-HHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHh-CCEE
Confidence 233332 34444444443 32100111111222333322211 10 11 223344 6999
Q ss_pred EcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 379 MTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 379 v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+.+ |++.+. +|+++++++++.+.+++.++
T Consensus 419 ~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 419 IRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred EEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 98754 666443 49999999999999998764
No 306
>PRK06105 aminotransferase; Provisional
Probab=99.68 E-value=2.3e-14 Score=139.12 Aligned_cols=340 Identities=12% Similarity=0.078 Sum_probs=189.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|..-...|+. +|.+.+++.+++... +...+ .......++.+.+++..... -+.+.+ +++
T Consensus 48 ~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S 117 (460)
T PRK06105 48 KRYIEGMAGLWSVALGFS--EQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVP------MSKVFF--TNS 117 (460)
T ss_pred CEEEEcchhHHhccCCCC--CHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence 568999887542345555 588999988887542 11111 01222335555555553221 357888 999
Q ss_pred hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhh-hhhCCC------------CccceeeecCCCc--------
Q 015283 111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPKTV-------- 163 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~~~-------- 163 (410)
|++|++.+.++.+.+. +| .+|+...-+|.+.... +...+. .+..++..+...+
T Consensus 118 GseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 197 (460)
T PRK06105 118 GSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEE 197 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChH
Confidence 9999999988765442 23 5788877777554321 111111 1112222110000
Q ss_pred ---ccChhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 164 ---GLDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 164 ---~~d~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
....+++++.+... +++...|++...+.-.|... +.+-++++.++|++||+++|+||++.+|+-. ...+...
T Consensus 198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRt---G~~f~~~ 274 (460)
T PRK06105 198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRT---GNMFGCE 274 (460)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcC---chhhhHH
Confidence 00135566666432 23456666555666667765 5666999999999999999999999888632 2333332
Q ss_pred HHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHh---h-ccCcccCCChhHHHHH---HHHhCCh
Q 015283 239 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR---L-ARPMYSNPPVHGARIV---ANVVGNP 310 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~a---~~~l~~~ 310 (410)
.+ +..++++ +++|.++ .| +.+|++++ ++++.+.+...... . ...++ +.+.++..++ ...+.++
T Consensus 275 ~~-~v~PDi~---~~gK~lg-gG~~P~~av~~---~~~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~aaa~a~L~~i~~~ 345 (460)
T PRK06105 275 TF-GIKPDIL---VMSKQLS-SSYQPLSAVLM---NEKVYDPIADESGKIGTFGHGFTA-SGHPVAAAVALENLAIIEER 345 (460)
T ss_pred hc-CCCCCee---eeecccc-cCcccceEEEE---cHHHHHHHhcccccCcccccCCCC-CCCHHHHHHHHHHHHHHHhc
Confidence 22 2223444 7899998 45 58888754 77755554321100 0 11222 3333333433 3333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhhc
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTNK 374 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~~ 374 (410)
...++.+++.++|.+.|+ ++ ...++.......|.+.-+.+ + ..+...++ +
T Consensus 346 -----------~l~~~v~~~g~~l~~~L~-~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~ 411 (460)
T PRK06105 346 -----------DLVGNAAERGARLQARLR-AL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH-E 411 (460)
T ss_pred -----------cHHHHHHHHHHHHHHHHH-Hh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-H
Confidence 334555666666666665 44 11111111222333321111 0 12234444 4
Q ss_pred CcEEEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 375 WHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 375 ~gi~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+||.+.+.| ||+.+. .|+++++++++++.+++.++
T Consensus 412 ~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 412 HGVISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred CCeEEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 699998865 777543 49999999999999998754
No 307
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.67 E-value=6.2e-14 Score=135.03 Aligned_cols=341 Identities=10% Similarity=0.032 Sum_probs=189.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-...|+. +|.+.+++.++++... ...+.......++.+.+++..... -+.+.+ +.+|
T Consensus 45 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~------~~~v~f--~~sG 114 (427)
T TIGR00508 45 RRLIDGMSSWWAAIHGYN--HPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNA------LDCVFL--ADSG 114 (427)
T ss_pred CEEEEccchHHHhcCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC------CCEEEE--eCCc
Confidence 568899887532233544 5888888888775421 111112233445666666653221 267888 9999
Q ss_pred hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhhh-hCCCC-------------ccceeeecCCCc-----ccC
Q 015283 112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARVP-------------WSEYRYYDPKTV-----GLD 166 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~~-~~g~~-------------~~~v~~~~~~~~-----~~d 166 (410)
++|++.+.++...+. +| .+|+..+.+|.+....+. ..+.. ...++.. ...+ .-|
T Consensus 115 seA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~ 193 (427)
T TIGR00508 115 SVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEA 193 (427)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHH
Confidence 999999988776542 23 678888888866532221 11110 1111110 0001 114
Q ss_pred hhhHHHHHhcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 167 FEGMIADIKAAPGGSFILLHGCA-HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 167 ~~~l~~~i~~~~~~~~~ii~~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
++++++.+...++...+|++... ++-.|.. ++.+.+++|.++|++||+++|+||++.+++.. ...+....+ +..
T Consensus 194 ~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~---G~~~~~~~~-~v~ 269 (427)
T TIGR00508 194 ITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRT---GKLFACEHA-GVV 269 (427)
T ss_pred HHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---Cccchhhhc-CCC
Confidence 66777777654344555555443 5555654 46788999999999999999999998776532 222222221 222
Q ss_pred CcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHH-h-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK-R-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 321 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~ 321 (410)
++++ +++|.++ .|+ .++.++. ++++.+.+..... . ....++. .+.++..++...|+- + .+ +
T Consensus 270 pDi~---~~gK~l~-gG~~p~~a~~~---~~~~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~--l----~~--~ 333 (427)
T TIGR00508 270 PDIL---CVGKALT-GGYMTLSATVT---TDKVAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLAI--L----LE--G 333 (427)
T ss_pred CCEE---Eechhhh-cCcccceEEEE---cHHHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHH--H----Hh--C
Confidence 3433 3799996 674 5666533 7775554432100 0 1112222 233333333333321 0 00 1
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec--CC--CH-HHHHHhhhcCcEEEcCCC---eEEecC-CCc
Q 015283 322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL--NK-AQSDNMTNKWHVYMTKDG---RISLAG-LSL 392 (410)
Q Consensus 322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~--~~-~~~~~ll~~~gi~v~~~g---Ris~~~-~~~ 392 (410)
...++++++.++|.+.|+ +++....+...... |.+.-+ .. .. .+..++++ +||++.+.+ |++.+. .++
T Consensus 334 ~~~~~~~~~~~~l~~~L~-~l~~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~l~~~ppl~~t~ 410 (427)
T TIGR00508 334 EWQKQVSAIENQLKRELS-PLRKNPVVKDVRVL-GAIGVVEMYKPVNVEELQKKFVE-QGVWIRPFGKLIYVMPPYIITT 410 (427)
T ss_pred CHHHHHHHHHHHHHHHHH-HhhcCCCEEeEecc-ccEEEEEECCccCHHHHHHHHHH-CCeEEEecCCEEEEECCCCCCH
Confidence 335677777777878777 66421001111112 333211 21 22 34556655 699998765 776552 489
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
++++++++++++++.+
T Consensus 411 ~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 411 EQLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999864
No 308
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.67 E-value=5.8e-14 Score=131.79 Aligned_cols=316 Identities=13% Similarity=0.103 Sum_probs=185.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-...|+. +|.+.+++.+++... + ...| +.....++.+.++++. + .+.+.+ +++|
T Consensus 24 ~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~la~~l~~~~----~----~~~v~~--~~SG 90 (364)
T PRK04013 24 RRYLDLIAGIGVNVLGHN--HPEWVEEMSEQLEKLVVAGPMF-EHEEKEEMLEELSKWV----N----YEYVYM--GNSG 90 (364)
T ss_pred CEEEEcccChhhccCCCC--CHHHHHHHHHHHHhcCCccCCc-CCHHHHHHHHHHHhhc----C----CCEEEE--eCch
Confidence 568899887543345654 478888888877542 1 1123 3334456666666663 1 257888 8999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-C-------CCCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-A-------RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~-------g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 183 (410)
++|++.+.++.+.....++|+..+.+|.+....... . +......... ...+ .|++.+++.+.+ +..+
T Consensus 91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~-~~~~-~d~~~l~~~i~~---~~aA 165 (364)
T PRK04013 91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFK-HIPF-NDVEAAKEAITK---ETAA 165 (364)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcE-EecC-CCHHHHHHHhcC---CcEE
Confidence 999999988877665448999999888765432221 1 1111000000 0011 267788888764 5667
Q ss_pred EEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283 184 LLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 184 ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 262 (410)
+++.+.+...|... +.+-++++.++|++||+++|+||++.++..+ +.+....+ +..++++ +++|.++ .|+
T Consensus 166 vivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG----~~~a~~~~-gv~PDiv---~~gK~lg-gG~ 236 (364)
T PRK04013 166 VIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTG----KFLAIEHY-KVEPDIV---TMGKGIG-NGV 236 (364)
T ss_pred EEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCC----chhHHHhc-CCCCCEE---Eeccccc-CCc
Confidence 77666666666655 4555999999999999999999999877432 23333222 2334555 5699998 588
Q ss_pred CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
.+|.++. +.++ .. ....+++. ...++..++ ...++++++. ++.++. + ..+.
T Consensus 237 P~~a~~~---~~~~----~~---~~~~~T~~-gnp~~~aaa~a~l~~i~~~~l~-------~~~~~~-------l-~~l~ 290 (364)
T PRK04013 237 PVSLTLT---NFDV----ER---GKHGSTFG-GNPLACKAVAVTLRILRRERLV-------EKAGEK-------F-IEIK 290 (364)
T ss_pred eeEEEEe---cccc----cC---CCcCCCCC-cCHHHHHHHHHHHHHHHhccHH-------HHHHHH-------H-HHhc
Confidence 8998744 4442 11 11222333 333333333 3444443331 121211 1 1222
Q ss_pred hccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 340 AKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 340 ~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
. . +.......|.+.-+.+. .....++++ +|+.+.+.| ||..+- ++++++++++++|.+++++.
T Consensus 291 -~-~----~v~~vRG~Gl~~gve~~~~~~~i~~~~~~-~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 291 -G-E----RVVTTRGRGLMIGIVLKKPVGKYVEELQN-RGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred -c-C----cceeeeeCcEEEEEEeCCcHHHHHHHHHh-CCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 1 1 11122333444333332 234556655 699998765 776543 59999999999999998764
No 309
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.67 E-value=5.2e-14 Score=122.24 Aligned_cols=322 Identities=14% Similarity=0.111 Sum_probs=202.9
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
|+..+++.+++++....-...+..+ ..-..+++|-+..-+.... +.-.++ ..+|+.+.+.+ +.+.+.||
T Consensus 24 GPsnl~~~V~~A~~~~~lgh~sPe~--~qIm~~v~egikyVFkT~n-----~~tf~i--sgsGh~g~E~a--l~N~lePg 92 (385)
T KOG2862|consen 24 GPSNLSGRVQEAMSRPSLGHMSPEF--VQIMDEVLEGIKYVFKTAN-----AQTFVI--SGSGHSGWEAA--LVNLLEPG 92 (385)
T ss_pred CCcCCCHHHHHhhcCCccccCCHHH--HHHHHHHHHHHHHHhccCC-----CceEEE--ecCCcchHHHH--HHhhcCCC
Confidence 5555778888887654322111111 2234577777777765442 233555 66778888887 67778899
Q ss_pred CEEEEcCC-CCc-chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHH
Q 015283 129 AKVLISSP-TWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKI 205 (410)
Q Consensus 129 d~Vl~~~p-~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i 205 (410)
|.|++..- .|+ .+.++.+++|+++..++. +.+....++.+.+.+.++ +..++++++....||+ ..+ +..+
T Consensus 93 d~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~--~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV---~q~~~~~~ 165 (385)
T KOG2862|consen 93 DNVLVVSTGTWGQRAADCARRYGAEVDVVEA--DIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGV---LQDLLAIS 165 (385)
T ss_pred CeEEEEEechHHHHHHHHHHhhCceeeEEec--CcccCccHHHHHHHHHhc--CCceEEEEecCccccc---cchHHHHH
Confidence 99998664 554 346788899999999976 556678899999999985 5556666667788898 555 5666
Q ss_pred HHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHHHH
Q 015283 206 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQL 284 (410)
Q Consensus 206 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~ 284 (410)
-++|++|+.++++|.+ +.++..+...|.|++ ++.+.+| -|++|. +|+ +- ++.++...++++...
T Consensus 166 g~lc~k~~~lllVD~V-aSlggt~F~mDewgV--------DvaytgS-QKaL~aP~GL--si---isfS~ka~~~~~~rK 230 (385)
T KOG2862|consen 166 GELCHKHEALLLVDTV-ASLGGTEFEMDEWGV--------DVAYTGS-QKALGAPAGL--SI---ISFSDKALEAIRDRK 230 (385)
T ss_pred HHHhhcCCeEEEEech-hhcCCccceehhhcc--------cEEEecc-hhhcCCCCCc--ce---eecCHHHHHHHhhcc
Confidence 7789999999999999 666644344455542 4555555 577754 443 33 445777667766543
Q ss_pred Hhhc---------c---------Cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 285 KRLA---------R---------PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 285 ~~~~---------~---------~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
.+.. . ..|. ++|......+...| ....++.+++..++.++..+++...|+ +.|++
T Consensus 231 ~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL-----~~I~eeGL~~~~~rH~e~s~~l~~~l~-~~GLq 304 (385)
T KOG2862|consen 231 TKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAAL-----ALIAEEGLENSWRRHREMSKWLKLSLE-ALGLQ 304 (385)
T ss_pred CCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcc
Confidence 3110 0 1122 23333222222222 222355678888999999999999999 88863
Q ss_pred CCcccc---cCC-cceeeecCCCHH-HHHHhhhcCcEEEcCC-----C---eEEecC--CCcccHHHHHHHHHHHhhhc
Q 015283 346 KDWSFI---LRQ-IGMFSFTGLNKA-QSDNMTNKWHVYMTKD-----G---RISLAG--LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 346 ~~~~~~---~~~-~~~~~~~~~~~~-~~~~ll~~~gi~v~~~-----g---Ris~~~--~~~~~i~~~~~~l~~~l~~~ 409 (410)
-..... .+. .+.-+-.+.++. .+..++.++++.+..| | ||.+.+ .+.+.++..++.|+..+...
T Consensus 305 ~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 305 LFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred ceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 211111 111 111111244654 4667777667776554 2 998543 37799999999999988754
No 310
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=5.4e-14 Score=136.33 Aligned_cols=334 Identities=13% Similarity=0.061 Sum_probs=183.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...||+..+ .....|+. +|.+.+++.+++... +.....+.....++.+.+++..... .+.+.+ +++|+
T Consensus 72 ~~ylD~~g~-~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~sGs 140 (459)
T PRK06082 72 KKYMDFHGN-NVHQLGYG--HPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGE------LNRVLF--APGGT 140 (459)
T ss_pred CEEEEcccH-hhcccCCC--CHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCC------CCEEEE--CCCcH
Confidence 356776522 21234543 588999888887542 1111112334446666666653221 367889 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-hhhhCCC------------CccceeeecC--CCcc-------cChhhH
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDP--KTVG-------LDFEGM 170 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~--~~~~-------~d~~~l 170 (410)
+|++.+.++.+.+....+|+....+|.+... .+...|. .+..+|.... ..+. -+++.+
T Consensus 141 eAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (459)
T PRK06082 141 SAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYL 220 (459)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHH
Confidence 9999998888777655788888887765532 2221221 1112221000 0010 013456
Q ss_pred HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
++.+.+. +...++++...++..+.+.+.+-++++.++|++||+++|.||++.+|+-. ...+....+ +..++++
T Consensus 221 ~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRt---G~~fa~e~~-gv~PDiv-- 293 (459)
T PRK06082 221 EYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRT---GEWFTHQAY-GIEPDIL-- 293 (459)
T ss_pred HHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---chhhHhHhh-CCCCCEE--
Confidence 6666542 34556665555655444566677999999999999999999999887632 223333222 2234444
Q ss_pred ecccccccccC-CCcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHHH---HHhCChhhHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 251 ~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~~~~~~~~~~ 325 (410)
.++|.++ .| +.+|.+++ ++++.+. ... ....++. .+.++..++. ..+.++ ...+
T Consensus 294 -~~gKgl~-gG~~P~~av~~---~~~i~~~----~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~-----------~l~~ 352 (459)
T PRK06082 294 -CIGKGLG-GGLVPIAAMIT---KDKYNTA----AQISLGHYTHE-KSPLGCAAALATIEVIEQE-----------GLLE 352 (459)
T ss_pred -Eeccccc-CCCCcceEEEE---cHHHHhh----ccCCCCCCCCC-cCHHHHHHHHHHHHHHHhc-----------CHHH
Confidence 3899998 56 58888744 5553222 111 1112232 3333333333 333222 2344
Q ss_pred HHHHHHHHHHHHhhhccCCCCCc-ccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCC-C---eEEe
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKDW-SFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKD-G---RISL 387 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~-g---Ris~ 387 (410)
+.+++.++|.+.|+ ++....++ ..+... |.+.-+.+ . ..+...+++ .||.+.+. + |++.
T Consensus 353 ~~~~~g~~l~~~L~-~l~~~~~~i~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~~i~~~P 429 (459)
T PRK06082 353 KVKADSQFMRERLL-EMKAKYPLIGDVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVSQGNVIQLSP 429 (459)
T ss_pred HHHHHHHHHHHHHH-HHHhhCCCeeeeeec-cceeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEecCCCEEEEeC
Confidence 55555555655555 43211111 112223 33322211 0 122345554 69998875 3 6764
Q ss_pred cC-CCcccHHHHHHHHHHHhhhc
Q 015283 388 AG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 388 ~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+. +++++++++++++.+++.++
T Consensus 430 pl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 430 PLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred CCccCHHHHHHHHHHHHHHHHHH
Confidence 42 59999999999999998653
No 311
>PRK06148 hypothetical protein; Provisional
Probab=99.67 E-value=1.9e-14 Score=151.57 Aligned_cols=337 Identities=12% Similarity=0.073 Sum_probs=190.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|.. ..|+. +|++.+++.+++... ....| ......++.+.+++.+... .+.+.| +++|+
T Consensus 624 ~~ylD~~~g~~--~lGH~--hp~v~~Ai~~q~~~l~~~~~~-~~~~~~~lAe~L~~~~p~~------~~~v~f--~nSGs 690 (1013)
T PRK06148 624 RAYLDCFNNVC--HVGHA--HPRVVAAAARQAARLNTNTRY-LHDAIVAYAERLTATLPDG------LTVAFF--VNSGS 690 (1013)
T ss_pred CEEEEcccChh--hcCCC--CHHHHHHHHHHHhhcCCcCCc-CCHHHHHHHHHHHHhCCCC------cCEEEE--eCCcH
Confidence 45678877753 45655 588999988877542 22333 2333445666666553221 257888 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCC------------CCccceeeec--CCCcc-cC-------hhh
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYD--PKTVG-LD-------FEG 169 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~--~~~~~-~d-------~~~ 169 (410)
+|++.+.++.+.+....+|+..+.+|.+.... +...+ ..+..++..+ ...+. .+ .+.
T Consensus 691 EA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 770 (1013)
T PRK06148 691 EANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAES 770 (1013)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHH
Confidence 99999999888776667899888877665322 11111 0111111100 00011 01 133
Q ss_pred HHHHHh---cCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 170 MIADIK---AAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 170 l~~~i~---~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
+++.+. ..+....++++-..+.-.|.+. +.+-++++.++|++||+++|.||++.+|+-.+ ...+....+ +-.+
T Consensus 771 l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG--~~~~a~e~~-gv~P 847 (1013)
T PRK06148 771 VAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVG--SHWWAFETQ-GVVP 847 (1013)
T ss_pred HHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCC--Ccchhhhhc-CCCc
Confidence 444443 2234566666555555566655 55559999999999999999999999886321 112333222 2223
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~ 322 (410)
+++ +++|.+| .|+.+|.+++ ++++.+.+... ....+++. ...++..++ ...++++ .
T Consensus 848 Div---t~gK~lg-gG~Plgav~~---~~ei~~~~~~g--~~~~~Tf~-gnpla~aaa~a~L~~i~~e-----------~ 906 (1013)
T PRK06148 848 DIV---TMGKPIG-NGHPMGAVVT---TREIADSFDNG--MEYFNTFG-GNPVSCAIGLAVLDIIEDE-----------D 906 (1013)
T ss_pred cee---eeccccc-CCcceEEEEE---cHHHHhhccCC--CccccCCC-CCHHHHHHHHHHHHHHhhc-----------c
Confidence 444 6799998 7899999755 67755544221 11223333 333333433 3333333 3
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCCC------
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKDG------ 383 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~g------ 383 (410)
..++.++..++|.+.|+ ++....++.......|.+.-+.+ . ..+..++++ +||++.+.|
T Consensus 907 l~~~~~~~G~~l~~~L~-~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g~~~~vl 984 (1013)
T PRK06148 907 LQRNALEIGNYLLAGLR-ELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARE-RGILIGTEGPHDNVL 984 (1013)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHh-CCeEEeccCCCCCEE
Confidence 33455555555555555 43211111111223333322211 1 123445555 699998754
Q ss_pred eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 384 RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
||..+. +|++++++++++|.+++.++
T Consensus 985 r~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 985 KIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 665442 49999999999999998764
No 312
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.66 E-value=9.6e-15 Score=137.53 Aligned_cols=316 Identities=12% Similarity=0.005 Sum_probs=185.7
Q ss_pred CcccccHHHHHHHHHhhcc----CC----CccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283 49 LQPYVLDVVKKAENLMLER----GE----NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 118 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~----~~----~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~ 118 (410)
|+..+|+.|++++...+.. +. ..+..+ ..-..+.++.+++++... +...+++ -+.+|+++.+.+
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-----~~~~v~~-~~gsgt~~~Ea~ 83 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-----DNYKVLF-LQGGASLQFAMV 83 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCcEEEE-EcCCchHHHHHH
Confidence 5666789999998876521 00 011211 123456777777775431 1234544 157778889888
Q ss_pred HHHHHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHH-HHhcCCCCcEEEEeCCCCCCCCC
Q 015283 119 AALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIA-DIKAAPGGSFILLHGCAHNPTGI 195 (410)
Q Consensus 119 ~~~~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~~~~~~ii~~~p~NPtG~ 195 (410)
+.+.+.+||++++..-+..+. .++++.+|.. ..+...+.+ ...+..++++ .+++ ++.++.+++..|.||+
T Consensus 84 --~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~-g~~~~~~~~~~~l~~---~~~~V~~th~eTstGv 156 (360)
T PRK05355 84 --PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDD-GFTYIPPLDEWQLSD---DAAYVHYTSNETIDGT 156 (360)
T ss_pred --HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEeccccc-CCCCCCChhhccCCC---CCCEEEEccCCCcceE
Confidence 667778999988877655443 4577788854 444432112 2344455555 5543 4566777888899999
Q ss_pred CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283 196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 275 (410)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~ 275 (410)
..+ ++.+| +|+++++|.+ +.++..+.+.+ ..+ +++.|..|.+|++|+ |.+++ +++
T Consensus 157 ~~~--~i~~i------~g~l~vVDav-ss~g~~~idv~---------~~d--~~~~ssqK~lgP~Gl--g~l~~---s~~ 211 (360)
T PRK05355 157 EFH--ELPDT------GDVPLVADMS-SDILSRPIDVS---------KFG--LIYAGAQKNIGPAGL--TIVIV---RED 211 (360)
T ss_pred ecC--ccccc------CCCcEEEEcC-ccccCccCCHH---------Hcc--EEEEeccccccCCce--EEEEE---CHH
Confidence 764 34444 8999999999 55553222211 112 778888999998875 77655 777
Q ss_pred hHHHHHHHHH------h-hccC-cccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283 276 LAARVKSQLK------R-LARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 276 ~~~~~~~~~~------~-~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 346 (410)
.++++..... . .... +..+|+.....++...|+.- ..+ .++++.++.+++.+++.+.|+ ++++-.
T Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i-----~~~gG~e~i~~r~~~l~~~l~~~l~-~~~~~~ 285 (360)
T PRK05355 212 LLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWL-----KEQGGVAAMEKRNQEKAALLYDAID-SSDFYR 285 (360)
T ss_pred HHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHH-----HHccCHHHHHHHHHHHHHHHHHHHH-hCCCcc
Confidence 6665433100 0 1111 22344444433333333311 022 357888999999999999999 887411
Q ss_pred CcccccCCc-ceeee--cCC-CHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 347 DWSFILRQI-GMFSF--TGL-NKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 347 ~~~~~~~~~-~~~~~--~~~-~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
.+......+ +...+ .+. ..+.+...+.+.|+.+.++ | |+|+.. .|.+|++.+++.|++++++
T Consensus 286 ~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 286 NPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred cCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 111000111 22222 221 1123323334469988555 3 999765 4899999999999998765
No 313
>PRK06149 hypothetical protein; Provisional
Probab=99.66 E-value=2.1e-14 Score=151.16 Aligned_cols=336 Identities=13% Similarity=0.079 Sum_probs=188.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|.. ..|+. +|++.+++.+++.... ...| ......++.+.+++.+... .+.+.+ +++|+
T Consensus 585 ~~ylD~~~~~~--~lGh~--hp~v~~Ai~~q~~~l~~~~~~-~~~~~~elae~L~~~~p~~------~~~v~f--~~SGs 651 (972)
T PRK06149 585 RSYLDMVNNVT--VLGHG--HPRLAAAAARQWSLLNTNSRF-HYAAVAEFSERLAALAPDG------LDTVFL--VNSGS 651 (972)
T ss_pred CEEEECCCCcc--ccCCC--CHHHHHHHHHHHHhccccccc-cCHHHHHHHHHHHHhCCCC------cCEEEE--eCCch
Confidence 56788887753 44544 5888888888775422 1223 2233456666666664221 357888 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-hhCC----------C---CccceeeecC--CCcc-cC-----hhhH
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDAR----------V---PWSEYRYYDP--KTVG-LD-----FEGM 170 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-~~~g----------~---~~~~v~~~~~--~~~~-~d-----~~~l 170 (410)
+|++.+.++.+.+....+|+..+-+|.+..... ...+ . .+..++..+. ..+. .+ .+++
T Consensus 652 EA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~ 731 (972)
T PRK06149 652 EANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDV 731 (972)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence 999999888877766678888887776543111 0000 0 0111211100 0011 11 2333
Q ss_pred HHHHh---cCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283 171 IADIK---AAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246 (410)
Q Consensus 171 ~~~i~---~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 246 (410)
++.+. ..+....++++-..+...|.+ ++..-++++.++|++||+++|.||++.+|+-.+ ...+.+..+ +..++
T Consensus 732 ~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG--~~~~a~e~~-gv~PD 808 (972)
T PRK06149 732 VAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG--HYFWGFEQQ-GVVPD 808 (972)
T ss_pred HHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC--ccchhhhhc-CCCCC
Confidence 33332 223455666655555555654 455559999999999999999999988886421 112333222 22234
Q ss_pred EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH---HHhCChhhHHHHHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~~~~~~~~ 323 (410)
++ +++|.+| .|..+|++++ ++++.+.+... ....+++ +.+.++..++. ..++++ ..
T Consensus 809 iv---t~gK~lg-~G~Pl~av~~---~~~i~~~~~~~--~~~~sT~-~gnP~~~aaala~L~~i~~e-----------~l 867 (972)
T PRK06149 809 II---TMAKGMG-NGHPLGAVIT---RREIAEALEAE--GYFFSST-GGSPVSCRIGMAVLDVLREE-----------KL 867 (972)
T ss_pred EE---Eeccccc-CCeeeEEEEE---cHHHHhhhccC--CcccCCC-CCCHHHHHHHHHHHHHHHhc-----------CH
Confidence 44 7899998 6888999755 77755544321 1222333 23333334443 333332 33
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCCC------e
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKDG------R 384 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~g------R 384 (410)
.++.++..++|.+.|+ ++....++.......|.+.-+.+ . ..+..++++ +||++.+.| |
T Consensus 868 ~~~~~~~G~~l~~~L~-~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~~~~g~~~~vl~ 945 (972)
T PRK06149 868 QENARRVGDHLKARLE-ALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIMQPTGDHLNILK 945 (972)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEEeecCCCCCEEE
Confidence 4455555555666555 44211111112223343322211 1 123455555 699998865 5
Q ss_pred EEec-CCCcccHHHHHHHHHHHhhh
Q 015283 385 ISLA-GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 385 is~~-~~~~~~i~~~~~~l~~~l~~ 408 (410)
|..+ ..+++++++++++|.+++.+
T Consensus 946 ~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 946 IKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHh
Confidence 5433 24999999999999999875
No 314
>PRK06917 hypothetical protein; Provisional
Probab=99.66 E-value=4.8e-14 Score=136.37 Aligned_cols=342 Identities=11% Similarity=0.033 Sum_probs=184.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc---cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|..-...|+. +|.+.+++.+++...... .| ......++.+.+++.+... .+.+.+ +++
T Consensus 31 ~~ylD~~~g~~~~~lGh~--hp~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~~s 99 (447)
T PRK06917 31 NKYFDGSSGAVTAGIGHG--VKEIADAIKEQAEEVSFVYRSQF-TSEPAEKLAKKLSDLSPGD------LNWSFF--VNS 99 (447)
T ss_pred CEEEECchhHHhccCCCC--CHHHHHHHHHHHhhCcCcccccc-CCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence 567898877542345554 588898888887552111 12 2222345555555553211 257888 999
Q ss_pred hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhhh-hhCCC------------CccceeeecCCCc--------
Q 015283 111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPKTV-------- 163 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~~-~~~g~------------~~~~v~~~~~~~~-------- 163 (410)
|++|++.+.++.+.+. +| .+|+..+.+|.+..... ...+. .+..++.......
T Consensus 100 GsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (447)
T PRK06917 100 GSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPT 179 (447)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHH
Confidence 9999999988776541 33 67888888886654322 21111 0111111000000
Q ss_pred --ccChhhHHHHHhcCC-CCcEEEEeCCCCC-CCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 164 --GLDFEGMIADIKAAP-GGSFILLHGCAHN-PTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 164 --~~d~~~l~~~i~~~~-~~~~~ii~~~p~N-PtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
.-+++.+++.+.... +...++++...+. .-|.. .+.+-++++.++|++||+++|.||++.+|+-. ...+...
T Consensus 180 ~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRt---G~~~a~~ 256 (447)
T PRK06917 180 CQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRT---GAMFAME 256 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcc---cchhhHH
Confidence 012456666776432 2455555444343 34454 45666999999999999999999999887522 2222222
Q ss_pred HHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHhh-ccCcccCCChhHHHHHHHHhCChhhHHHH
Q 015283 239 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDEW 316 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~ 316 (410)
. .+..++++ +++|.++ .|. .+|.+++ ++++.+.+...-... ...++ +.+.++..++...|+--
T Consensus 257 ~-~gv~PDi~---~~gK~l~-~G~~Pi~a~~~---~~~i~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~l~~l------ 321 (447)
T PRK06917 257 H-WGVEPDIM---TLGKGLG-AGYTPIAATVV---SDRVMEPILRGSRSIMSGHTL-SANPLSAATALAVLEYM------ 321 (447)
T ss_pred h-cCCCCCEE---Eeeehhc-cCCcceEEEEE---cHHHHHHHhccCcccccccCC-CCCHHHHHHHHHHHHHH------
Confidence 2 22233444 6799998 675 7888754 777555443211111 11223 23333334443333210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------------CHHHHHHhhhcCcEEEc
Q 015283 317 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------------NKAQSDNMTNKWHVYMT 380 (410)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ll~~~gi~v~ 380 (410)
.+ +...++++++.++|.+.|+ ++....++.......|.+.-+.+ ...+...+++ +||.+.
T Consensus 322 ~~--~~l~~~~~~~g~~l~~~L~-~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~ 397 (447)
T PRK06917 322 EK--HNLPEKAAEKGEYLIKGLQ-KVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAK-NGLLLY 397 (447)
T ss_pred HH--CCHHHHHHHHHHHHHHHHH-HHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHh-CCcEEE
Confidence 00 1233455555555555555 43211111111122233322111 0122445555 699997
Q ss_pred CC--------C---eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283 381 KD--------G---RISLA-GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 381 ~~--------g---Ris~~-~~~~~~i~~~~~~l~~~l~~ 408 (410)
+. + |++.+ ..|++++++++++|.+++.+
T Consensus 398 ~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 398 PAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred ecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 64 2 67644 24999999999999999865
No 315
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.66 E-value=5.8e-15 Score=137.61 Aligned_cols=324 Identities=16% Similarity=0.184 Sum_probs=174.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc------CCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
.-|+|-..++ +++|.+++++...+.+....+|+ ...-++++.+...+.....++.. ..++-+-++.
T Consensus 21 ~~l~LiaSEN-------~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~-~~~w~anvqp 92 (399)
T PF00464_consen 21 STLNLIASEN-------YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE-PKEWYANVQP 92 (399)
T ss_dssp HSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S-TTTEEEE---
T ss_pred cCccccCccc-------ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC-cccceEEeec
Confidence 4578876654 23799999887666443323332 12222333332223222223322 1234555678
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh---h-----C--CCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN---D-----A--RVPWSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~---~-----~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
.+|+.|+..+ +.+.+.|||+|+..++..+++.+.-. . . ..+.+.+++. ++++.+|.+++++.+.+.
T Consensus 93 ~SGs~An~av--~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d-~~~~~ID~d~l~~~a~~~- 168 (399)
T PF00464_consen 93 HSGSQANLAV--YMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD-PDTGLIDYDELEKLAKEH- 168 (399)
T ss_dssp SSHHHHHHHH--HHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHHHHHH-
T ss_pred CCchHHHHHH--HHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeee-cCCCeECHHHHHHHHhhc-
Confidence 8999999887 56668899999999987776643221 1 1 2345556663 467889999999998874
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++++|++..-..|- .-+++++.++|++.|.+|+.|-++. ++..++.-+. ++ ...+++.+|..|+|
T Consensus 169 -kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~--P~------~~ADvvt~sThKtl 234 (399)
T PF00464_consen 169 -KPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPN--PF------PYADVVTGSTHKTL 234 (399)
T ss_dssp ---SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS----GC------CTSSEEEEESSGGG
T ss_pred -CCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecC--cc------ccceEEEeeccccc
Confidence 45566654434333 4568888888999999999999964 2332211111 11 12568899999997
Q ss_pred cccCCCcceEEEEeC-------------CchhHHHHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCS-------------SSDLAARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~ 323 (410)
+|-|-|.+ .++ +++ +.+.+....++...+.+.....++ +..+.+ ....+.+++
T Consensus 235 --~GPrggiI--~~~~~~~~~~~~~~~~~~~----l~~~I~~avfP~~qg~~h~~~iaalAval~e-----a~~~~fk~Y 301 (399)
T PF00464_consen 235 --RGPRGGII--LTNKGSKNVDKKGKEIDEE----LAEKIDSAVFPGLQGGPHMHRIAALAVALKE-----ALSPEFKEY 301 (399)
T ss_dssp ---SSS-EEE--EES-SEEEE-TTS-EEEHH----HHHHHHHHHTTTT-SS--HHHHHHHHHHHHH-----HTSHHHHHH
T ss_pred --cccCceEE--EEcCCccccCCcccccHHH----HHHHhccccCCCcccCcchhHHHHHHHHHhc-----ccCHHHHHH
Confidence 68887776 344 255 444455555543333333222222 222221 112234688
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCc-ceeeecC-----CCHHHHHHhhhcCcEEEc----CC--------C-e
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI-GMFSFTG-----LNKAQSDNMTNKWHVYMT----KD--------G-R 384 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~ll~~~gi~v~----~~--------g-R 384 (410)
.++..++.+.|.+.|. +.|+ .+....+ ...+|++ ++...+.+.|++.||.+. |+ | |
T Consensus 302 a~qVv~NAk~La~~L~-~~G~----~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlR 376 (399)
T PF00464_consen 302 AKQVVKNAKALAEALQ-ERGF----KVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLR 376 (399)
T ss_dssp HHHHHHHHHHHHHHHH-HTT-----EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEE
T ss_pred HHHHHHHHHHHHHHHh-hCCc----EEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEE
Confidence 8899999999999999 8884 4443333 3335654 356778888899999884 22 3 8
Q ss_pred EEec-----CCCcccHHHHHHHH
Q 015283 385 ISLA-----GLSLAKCEYLADAI 402 (410)
Q Consensus 385 is~~-----~~~~~~i~~~~~~l 402 (410)
|+.. ++.+++++++.+.|
T Consensus 377 lGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 377 LGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp EESHHHHHTT--HHHHHHHHHHH
T ss_pred ECCHHHHhCCCCHHHHHHHHhhC
Confidence 8643 45777777776543
No 316
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=4.3e-14 Score=135.70 Aligned_cols=337 Identities=10% Similarity=0.083 Sum_probs=185.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-...|+. .|.+.+++.+++.......+ .......++.+.+++..... .+.+.+ +++|
T Consensus 40 ~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG 109 (422)
T PRK05630 40 STVIDAMSSWWSAAHGHG--HPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNG------LDHVFY--SDSG 109 (422)
T ss_pred CEEEEcchhHHHhcCCCC--CHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCC------cCEEEE--eCCc
Confidence 567898887553345665 58889888888754211111 12223345666666553211 357888 9999
Q ss_pred hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhhh-hhhCCC-------------CccceeeecCCCcc-cC----
Q 015283 112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYDPKTVG-LD---- 166 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~~~~~~-~d---- 166 (410)
++|++.+.++.+.+. +| .+|+....+|.+.... +...+. ....+|........ -+
T Consensus 110 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 189 (422)
T PRK05630 110 SVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEY 189 (422)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHH
Confidence 999999988877653 23 5788888877664322 211111 11222221100000 01
Q ss_pred hhhHHHHHhcCCCCcEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 167 FEGMIADIKAAPGGSFILLHGCA-HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 167 ~~~l~~~i~~~~~~~~~ii~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
.+.+++.+.. ...++++... +...|... +.+-++++.++|++||+++|+||++.+++-. ...+.... .+..
T Consensus 190 ~~~~~~~~~~---~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~Grt---G~~~a~~~-~gv~ 262 (422)
T PRK05630 190 LRSLELLIDE---TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRT---GELFATLA-AGVT 262 (422)
T ss_pred HHHHHHHHhh---ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcC---chhhHHHh-cCCC
Confidence 1233444432 5566665552 67778765 5556999999999999999999999877532 23333222 1222
Q ss_pred CcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH--h-hccCcccCCChhHHHHH---HHHhCChhhHHHHH
Q 015283 245 MELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK--R-LARPMYSNPPVHGARIV---ANVVGNPALFDEWK 317 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~ 317 (410)
++++ +++|.++ .| ..+|++++ ++++.+.+...-. . ....++. .+.++..++ ...+.++
T Consensus 263 PDi~---t~gK~l~-gG~~p~~av~~---~~~i~~~~~~~~~~~~~~h~~T~~-g~Pla~aaa~aaL~~l~~~------- 327 (422)
T PRK05630 263 PDIM---CVGKALT-GGFMSFAATLC---TDKVAQLISTPNGGGALMHGPTFM-ANPLACAVAHASLEIIETG------- 327 (422)
T ss_pred CCee---eeechhh-cCccccceeec---cHHHHHHHhccCCCCccccCCCCc-CCHHHHHHHHHHHHHHHhC-------
Confidence 3444 7899986 46 46788644 7775554432100 0 1122333 333333333 3333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC---eEEecC
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RISLAG 389 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g---Ris~~~ 389 (410)
..+++++++.+++.+.|+ ++.....+..+ ...|.+.-+.+ .. .+...+++ +|+++.+.| ||..+-
T Consensus 328 ----~~~~~~~~~g~~l~~~L~-~l~~~~~v~~v-Rg~Gl~~~ie~~~~~~~~~~~~~~~~-~Gl~~~~~g~~l~~~PpL 400 (422)
T PRK05630 328 ----MWRKQVKRIEAELIAGLS-PLAHLPGVADV-RVLGAIGVVEMEQPVDMEEATQAAVD-HGVWLRPFGRLVYVMPPY 400 (422)
T ss_pred ----cHHHHHHHHHHHHHHHHH-HhhcCCCeeee-eccccEEEEEECCcccHHHHHHHHHH-CCeEEEecCCEEEEECCc
Confidence 223355555555555554 43210001112 22233322222 22 33455555 699998876 666442
Q ss_pred -CCcccHHHHHHHHHHHhhhc
Q 015283 390 -LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 390 -~~~~~i~~~~~~l~~~l~~~ 409 (410)
.|++++++++++|++++.+.
T Consensus 401 ~it~~~i~~~~~~l~~al~~~ 421 (422)
T PRK05630 401 ITTSEQIAQICAALAAAVKAK 421 (422)
T ss_pred cCCHHHHHHHHHHHHHHHhcc
Confidence 49999999999999998753
No 317
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.66 E-value=1.3e-14 Score=138.04 Aligned_cols=308 Identities=13% Similarity=0.023 Sum_probs=178.8
Q ss_pred ccHH-HHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC-ChhhHHHHHHHHHHHhCC-CC
Q 015283 53 VLDV-VKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL-SGTGSLRLAAALIERYFP-GA 129 (410)
Q Consensus 53 ~~~~-v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~-ggt~a~~~~~~~~~~~~~-gd 129 (410)
+++. |.+++........+....-..-+.+.|+.+++++... ++++|++ +. +||++++.+. .+.+.+ ++
T Consensus 23 ~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~-----~~~~v~~--~~gs~T~~~~~~~--~~l~~~~~~ 93 (378)
T PRK03080 23 KRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLP-----EGYEVGI--VPGSDTGAWEMAL--WSLLGARRV 93 (378)
T ss_pred CChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCC-----CCceEEE--ECCchHHHHHHHH--HhcCCCCcc
Confidence 4667 9998876543211011111334568888888886532 1346877 64 8999999983 444554 44
Q ss_pred EEEEcCCCCcchhh--hhhhCCC-CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 130 KVLISSPTWGNHKN--IFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 130 ~Vl~~~p~y~~~~~--~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
.|+. .-.|+.... ..+.+|. +++.++. +++..+|++++. . +.++.+++.+|.||...+. ++|+
T Consensus 94 ~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~--~~g~~~d~~~i~----~----~~~V~~~h~~t~tG~~~pi---~~I~ 159 (378)
T PRK03080 94 DHLA-WESFGSKWATDVVKQLKLEDPRVLEA--DYGSLPDLSAVD----F----DRDVVFTWNGTTTGVRVPV---ARWI 159 (378)
T ss_pred eEEE-eCHHHHHHHHHHHhhcCCCCceEecc--CCCCCCCHhhcC----C----CCCEEEEecCCccceeccc---hhhc
Confidence 5544 445554322 2356788 8888876 344556766532 1 2235667889999997764 4555
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHHH-
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQL- 284 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~- 284 (410)
+ +++|+++++|.+ +.++..+.+ +.. .++++.|..|.++ ++| +|++++ +++.++++....
T Consensus 160 ~--~~~g~~~vVDa~-qs~G~~pid-----v~~------iD~~~~s~~K~l~~P~G--~g~l~v---~~~~~~~~~p~~~ 220 (378)
T PRK03080 160 G--ADREGLTICDAT-SAAFALPLD-----WSK------LDVYTFSWQKVLGGEGG--HGMAIL---SPRAVERLESYTP 220 (378)
T ss_pred c--ccCCCeEEEecc-cccccCCCC-----HHH------CcEEEEehhhhCCCCCc--eEEEEE---CHHHHHhhhcccC
Confidence 5 678999999999 555532222 111 3678888899885 366 577766 777776654311
Q ss_pred -----------------HhhccC-cccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 285 -----------------KRLARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 285 -----------------~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
...... +..+++..+..++...|+. . ... .+++++++.+++.+++.+.++ +++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~---l--~~~gG~e~i~~r~~~l~~~l~~~l~-~~~~~ 294 (378)
T PRK03080 221 ARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDW---A--NSIGGLDALIARTAANASVLYDWAE-KTPWA 294 (378)
T ss_pred CCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHH---H--HHcCCHHHHHHHHHHHHHHHHHHHH-hCCCc
Confidence 000011 1122333332222222221 0 011 246778888999999999998 87631
Q ss_pred CCccccc-CCc-ceeee-c-C----CCHHHHHHhhhcCcEEEcCC------C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 346 KDWSFIL-RQI-GMFSF-T-G----LNKAQSDNMTNKWHVYMTKD------G--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 346 ~~~~~~~-~~~-~~~~~-~-~----~~~~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
..+...+ ..+ +...+ + + .+.++..+++++ |+.+..| + |+|+.. .++++++.+++.|++++++
T Consensus 295 ~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 295 TPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred ccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 1111011 112 23332 2 2 223456666665 7776542 2 999664 4889999999999998876
Q ss_pred c
Q 015283 409 V 409 (410)
Q Consensus 409 ~ 409 (410)
+
T Consensus 374 ~ 374 (378)
T PRK03080 374 L 374 (378)
T ss_pred H
Confidence 4
No 318
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=4.7e-14 Score=132.97 Aligned_cols=214 Identities=12% Similarity=0.031 Sum_probs=141.3
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCC
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVP 151 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~ 151 (410)
.+....|.+.++++-.. +..++ +++|+.|+..+ ++..+.+||+|+++...|.+....+ +..|.+
T Consensus 61 nPt~~~le~~la~LEg~--------~~a~~--~~SGmaAi~~~--~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~ 128 (395)
T PRK08114 61 TLTHFSLQEAMCELEGG--------AGCAL--YPCGAAAVANA--ILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVT 128 (395)
T ss_pred ChhHHHHHHHHHHHhCC--------CeEEE--EhHHHHHHHHH--HHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcE
Confidence 44567888999987322 34444 68899999987 4556889999999999998776554 567888
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc--CCcccccccCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGS 229 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~~ 229 (410)
+..++. .|.+.+++.+++ +++++++.+|.||||.+. ++++|+++|+++ |+++++|.++.....
T Consensus 129 v~~vd~-------~d~~~l~~~l~~---~TrlV~~EtpsNp~~~v~---DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-- 193 (395)
T PRK08114 129 TTWFDP-------LIGADIAKLIQP---NTKVVFLESPGSITMEVH---DVPAIVAAVRSVNPDAVIMIDNTWAAGVL-- 193 (395)
T ss_pred EEEECC-------CCHHHHHHhcCC---CceEEEEECCCCCCCEee---cHHHHHHHHHHhCCCCEEEEECCCccccc--
Confidence 777754 367888888875 688888899999999955 577788889997 499999999764321
Q ss_pred CCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283 230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308 (410)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~ 308 (410)
. ++. ..+.++++.|.+|.++-+| ...|.+ +.+++..+++..... ..-...+......+.+-|+
T Consensus 194 ~--~pl-------~~GaDivv~S~tKyl~Ghsdv~~G~v---~~~~~~~~~l~~~~~----~~G~~~~p~~a~l~~rgl~ 257 (395)
T PRK08114 194 F--KAL-------DFGIDISIQAGTKYLVGHSDAMIGTA---VANARCWEQLRENSY----LMGQMVDADTAYMTSRGLR 257 (395)
T ss_pred c--CHH-------HcCCcEEEEcCcccccCCCcceeEEE---EcCHHHHHHHHHHHH----hccCCCCHHHHHHHHcCCC
Confidence 1 111 2246899999999886555 444543 335665454443222 1222334433333444444
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.- .-..++..++...+.+.|+ +.+
T Consensus 258 TL----------~lR~~~~~~na~~va~~L~-~hp 281 (395)
T PRK08114 258 TL----------GVRLRQHEESSLKVAEWLA-EHP 281 (395)
T ss_pred cH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 33 2333455556666777776 654
No 319
>PRK07480 putative aminotransferase; Validated
Probab=99.66 E-value=4.9e-14 Score=136.53 Aligned_cols=340 Identities=13% Similarity=0.085 Sum_probs=183.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|..-...|+. .|.+.+++.+++... +...+ .+.....++.+.+++.+... .+.+.+ +++
T Consensus 50 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S 119 (456)
T PRK07480 50 NKILDGMAGLWCVNVGYG--RKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPG------FNHVFF--TNS 119 (456)
T ss_pred CEEEEccchHHHhcCCCC--CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCC
Confidence 467888877532344554 588888888877542 11111 12233345555555553211 357888 999
Q ss_pred hhhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCC------------Cccceeeec--CCCcccC---
Q 015283 111 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYD--PKTVGLD--- 166 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~--~~~~~~d--- 166 (410)
|++|++.+.++.+.+. +| .+|+...-+|.+..- .+...|. .+..++... ...+..+
T Consensus 120 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 199 (456)
T PRK07480 120 GSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEE 199 (456)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHH
Confidence 9999999988887652 33 468887777765432 1111111 011111100 0000001
Q ss_pred -----hhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 167 -----FEGMIADIKA-APGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 167 -----~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
.+.+++.+.+ .++...++++...+.-.|...++++ ++++.++|++||+++|.||++.+|+-. ...+....
T Consensus 200 ~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~a~~~ 276 (456)
T PRK07480 200 FGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRT---GEWFGSQH 276 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---cchhhhhh
Confidence 2455544432 2345666666666666777665544 999999999999999999999888632 22333322
Q ss_pred HhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHHHHHh---CChhhHH
Q 015283 240 FATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANVV---GNPALFD 314 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~l---~~~~~~~ 314 (410)
+ +..++++ +++|.++ .|. .+|.+++ ++++.+.+...... ....+++ .+.++..++...| .+++
T Consensus 277 ~-gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~~--- 344 (456)
T PRK07480 277 F-GIKPDLM---TIAKGLT-SGYIPMGAVGV---GDRVAEVLIEEGGEFNHGFTYS-GHPVAAAVALANLRILRDEG--- 344 (456)
T ss_pred c-CCCCCee---eeehhhc-cCCccceEEEE---cHHHHHHHhcCCCCcccCCCCC-cCHHHHHHHHHHHHHHHhCC---
Confidence 2 2233444 6799998 574 7888754 77755544210011 1222333 3344444443333 3222
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----------C----HHH-HHHhhhcCcE
Q 015283 315 EWKAEMEMMAGRI-KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----------N----KAQ-SDNMTNKWHV 377 (410)
Q Consensus 315 ~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----------~----~~~-~~~ll~~~gi 377 (410)
..++. ++..+++.+.|+ ++. ..++.......|.+.-+.+ . ... ...+++ +||
T Consensus 345 --------l~~~~~~~~g~~l~~~l~-~l~-~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gl 413 (456)
T PRK07480 345 --------IVERVRDDTGPYLQKRLR-ELA-DHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA-NGL 413 (456)
T ss_pred --------HHHHHHHHHHHHHHHHHH-Hhh-cCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHH-CCc
Confidence 23344 244455555554 331 0111111122233322211 0 012 334454 699
Q ss_pred EEcCCC---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 378 YMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 378 ~v~~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+.+.| ||+.+. +|++++++++++|.+++.++
T Consensus 414 l~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 414 IMRAVGDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred EEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 998765 676543 49999999999999998753
No 320
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.66 E-value=6.4e-14 Score=119.36 Aligned_cols=321 Identities=16% Similarity=0.067 Sum_probs=193.7
Q ss_pred ccHHHHHHHHHhhccCCCccCcC--------CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283 53 VLDVVKKAENLMLERGENKEYLP--------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER 124 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~--------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~ 124 (410)
++++.++++.+.-+..+...|.. -+-+.++.+.+++++.. +.+-+ |+|+.++-+.+. .+.
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~--------D~~R~--t~GARe~KfavM--hal 96 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGM--------DEVRV--TAGAREAKFAVM--HAL 96 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCC--------ceeee--cccchhhHHHHH--HHh
Confidence 46888888877655433344431 12356788889999632 34445 999999999873 344
Q ss_pred hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEeCCCCCCCCCCCCHH
Q 015283 125 YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPE 200 (410)
Q Consensus 125 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~~~p~NPtG~~~~~~ 200 (410)
+.+||.|++...++-..--.++..|+++..+|......+.++++...+.|.+. +....+.++++|....|. ..
T Consensus 97 ~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGN---l~ 173 (382)
T COG1103 97 CKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGN---LA 173 (382)
T ss_pred ccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCC---ch
Confidence 66999999988765444446788999999999766667889988887776552 233555555555555555 88
Q ss_pred HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283 201 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 201 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
+-++++++|+++|+.++...+|.--..+ . + ..+...+++++|=+|++... -.+|.+.. +.+..+.+
T Consensus 174 Dakkva~ic~e~gvPlllN~AYt~Grmp---v---s----~ke~g~DFiVgSGHKsmAAs-~PiGvl~~---~eE~ae~V 239 (382)
T COG1103 174 DAKKVAKICREYGVPLLLNCAYTVGRMP---V---S----GKEIGADFIVGSGHKSMAAS-APIGVLAM---SEEWAEIV 239 (382)
T ss_pred hhHHHHHHHHHcCCceEeecceeecccc---c---c----ccccCCCEEEecCccchhcc-CCeeEEee---hhHHHHHH
Confidence 8999999999999999999998754421 1 1 12334678899999999755 46888765 77877776
Q ss_pred HHHHHh-h--ccCcccCCChhHHHHHHHHhCCh---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283 281 KSQLKR-L--ARPMYSNPPVHGARIVANVVGNP---ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 354 (410)
Q Consensus 281 ~~~~~~-~--~~~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 354 (410)
.+.-.. . ..-...++...++-+.+.+-+-+ +-.+.|.+++++.|....+.-+. .++. .+|. ......
T Consensus 240 ~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEki--gg~~-qlG~----rPk~Hd 312 (382)
T COG1103 240 LRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKI--GGVK-QLGE----RPKNHD 312 (382)
T ss_pred HhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHH-HhCC----CCcccc
Confidence 543311 0 00011122222222222222222 22333554444444433333321 1222 2221 111111
Q ss_pred cceeeecCC---------CHHHHHHhhhcCcEEEc-CCC----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 355 IGMFSFTGL---------NKAQSDNMTNKWHVYMT-KDG----RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 355 ~~~~~~~~~---------~~~~~~~ll~~~gi~v~-~~g----Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
--.|-...+ ..-++.+-|+++||.-. ||. .+|+.+++.|+++.+++++++++++.
T Consensus 313 Lm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 313 LMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred eeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 001111111 11133344466788754 443 67888899999999999999998864
No 321
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.65 E-value=4.6e-14 Score=136.91 Aligned_cols=341 Identities=12% Similarity=0.023 Sum_probs=185.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC-c-cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-K-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~-~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.--...|+. +|.+.+++.+++..... + .+.+.....++.+.+++....... ..+.+.+ .+++|
T Consensus 63 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~---~~~~v~f-~~~SG 136 (464)
T PRK06938 63 RQFIDCLAGAGTLALGHN--HPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFA---REAKIQF-CGPTG 136 (464)
T ss_pred CEEEEccCCccccccCCC--CHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCccccc---ccceEEE-eCCCc
Confidence 467888777543345665 58899998888753211 1 111222333455555554322110 0124544 13699
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCC------------CCccceeeecCC--Cc--------ccChh
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYDPK--TV--------GLDFE 168 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~~~--~~--------~~d~~ 168 (410)
++|++.+.++.+.+....+|+....+|.+.... +...| ..+..++..... .+ ..+++
T Consensus 137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence 999999988887765557888888877665432 21111 012223321100 00 01356
Q ss_pred hHHHHHhcCC---CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 169 GMIADIKAAP---GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 169 ~l~~~i~~~~---~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
.+++.+.+.. +...++++-..+.-.|.+. +..-++++.++|++||+++|.||+..+|+-. ...+.... .+-.
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRt---G~~~a~e~-~gv~ 292 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRT---GKMFAFEH-AGII 292 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---cHHHHHHh-cCCC
Confidence 6777776421 2456666555566567765 4666999999999999999999999998632 23333322 2233
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH---hCChhhHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEME 321 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~~~ 321 (410)
++++ .++|.++ .|+.+|.++. ++++ +.+. .....+++. ...++..++... +.++
T Consensus 293 PDiv---~~gKglg-gG~PlsAv~~---~~~~-~~~~---~~~~~~T~~-gnpla~Aaa~a~L~~l~~~----------- 349 (464)
T PRK06938 293 PDVV---VLSKAIG-GSLPLAVVVY---REWL-DTWQ---PGAHAGTFR-GNQMAMAAGSATLRYIKEH----------- 349 (464)
T ss_pred CCEE---Eeecccc-CCCceEEEee---hhHh-hccC---CCCCCCCCC-cCHHHHHHHHHHHHHHHHh-----------
Confidence 4555 4699998 6899999743 4442 2221 111223333 333333444333 3322
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------------CH----HHHHHhhhcCcEEEcCC
Q 015283 322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------------NK----AQSDNMTNKWHVYMTKD 382 (410)
Q Consensus 322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~~ll~~~gi~v~~~ 382 (410)
+..++.++..+++.+.|+ ++....++.......|.+.-+.+ +. .+...+++ +|+.+.++
T Consensus 350 ~l~~~~~~~G~~l~~~L~-~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~ 427 (464)
T PRK06938 350 RLAEHAAAMGERLREHLR-QLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILELG 427 (464)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEeec
Confidence 233444444455555444 33110111111222233322211 11 12445554 69998764
Q ss_pred C------eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 383 G------RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 383 g------Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
| ||..+ .+|+++++++++++.+++.++
T Consensus 428 g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 428 GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 3 66533 259999999999999998753
No 322
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.65 E-value=3.9e-14 Score=133.28 Aligned_cols=216 Identities=17% Similarity=0.171 Sum_probs=140.4
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 151 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~ 151 (410)
......+.+.+++.... +..++ +++|+.|+..+ +++.+.+||+|+++...|++....++ ..|.+
T Consensus 54 nPt~~~le~~la~Le~g--------~~a~~--~~SGmaAi~~~--l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~ 121 (386)
T PF01053_consen 54 NPTVRALEQRLAALEGG--------EDALL--FSSGMAAISAA--LLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVE 121 (386)
T ss_dssp -HHHHHHHHHHHHHHT---------SEEEE--ESSHHHHHHHH--HHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSE
T ss_pred cccHHHHHHHHHHhhcc--------cceee--ccchHHHHHHH--HHhhcccCCceEecCCccCcchhhhhhhhcccCcE
Confidence 34557888899888433 34555 79999999887 56668899999999999998876665 45666
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC-CcccccccCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-HIPFFDVAYQGFASGSL 230 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~-~~li~Deay~~~~~~~~ 230 (410)
+..++. -|++++++.+++ ++.++++.+|.||+.. ..++++|+++|+++| +++|+|+.+.....-
T Consensus 122 v~~~d~-------~d~~~l~~~l~~---~t~~v~~EspsNP~l~---v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-- 186 (386)
T PF01053_consen 122 VTFVDP-------TDLEALEAALRP---NTKLVFLESPSNPTLE---VPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-- 186 (386)
T ss_dssp EEEEST-------TSHHHHHHHHCT---TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC--
T ss_pred EEEeCc-------hhHHHHHhhccc---cceEEEEEcCCCcccc---cccHHHHHHHHHHhCCceEEeeccccceeee--
Confidence 666543 378999999986 8889999999999987 567788888899998 999999998654321
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC-chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS-SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
+ ++ ..+.++++.|.+|.++-.|--+|.++ ++++ +++.++++.... ......+......+.+-|+.
T Consensus 187 --~--pL-----~~GaDivv~S~TKyl~Ghsdv~~G~v-v~~~~~~~~~~l~~~~~----~~G~~~~p~da~ll~rgl~T 252 (386)
T PF01053_consen 187 --N--PL-----ELGADIVVHSATKYLSGHSDVMGGAV-VVNGSSELYDRLREFRR----LLGATLSPFDAWLLLRGLRT 252 (386)
T ss_dssp -----GG-----GGT-SEEEEETTTTTTTSSSE-EEEE-EESSHHHHHHHHHHHHH----HHT-B--HHHHHHHHHHHTT
T ss_pred --c--cC-----cCCceEEEeeccccccCCcceeeEEE-EECchhhhhhhhcchhh----hcCccchHHHHHHHhcCCCc
Confidence 1 11 11357889999999864443344442 3444 566665554332 11223344444444455554
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
- ....++..++...+.+.|+ +.+
T Consensus 253 l----------~~R~~~~~~nA~~lA~~L~-~hp 275 (386)
T PF01053_consen 253 L----------PLRMERQNENAEALAEFLE-EHP 275 (386)
T ss_dssp H----------HHHHHHHHHHHHHHHHHHH-TST
T ss_pred H----------HHHHHHHHHHHHHHHHHHH-hCC
Confidence 3 3344555667777778887 664
No 323
>PRK07483 hypothetical protein; Provisional
Probab=99.65 E-value=5.9e-14 Score=135.60 Aligned_cols=341 Identities=13% Similarity=0.120 Sum_probs=183.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|..-...|+. +|.+.+++.++++... ...+.......++.+.+++..... .+.+.+ +++|
T Consensus 30 ~~ylD~~~g~~~~~lGh~--~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~sG 99 (443)
T PRK07483 30 KRYLDASGGAAVSCLGHS--HPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAG------LEHVYF--VSGG 99 (443)
T ss_pred CEEEEcCccHhhhccCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--cCCc
Confidence 568899887543355655 5888898888875421 111112222334555555543211 367899 9999
Q ss_pred hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCC------------CccceeeecC-CCc--cc----
Q 015283 112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDP-KTV--GL---- 165 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~-~~~--~~---- 165 (410)
++|++.+.++.+.+. +| .+|+....+|.+... .+...|. .+..++.... +.. ..
T Consensus 100 sEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (443)
T PRK07483 100 SEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEA 179 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHH
Confidence 999999998887762 33 578887877765532 1111110 1111221100 000 00
Q ss_pred ----ChhhHHHHHhc-CCCCcEEEEeCCCCC-CCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 166 ----DFEGMIADIKA-APGGSFILLHGCAHN-PTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 166 ----d~~~l~~~i~~-~~~~~~~ii~~~p~N-PtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
.++.+++.+.. .++...++++...+. -.|.. ++.+-++++.++|++||+++|.||++.+|+-. ...+...
T Consensus 180 ~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRt---G~~~a~~ 256 (443)
T PRK07483 180 YGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRT---GTLFACE 256 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccC---cHHHHHh
Confidence 02455555542 233555666554453 23554 45666999999999999999999999988632 2333332
Q ss_pred HHhhcCCcEEEEecccccccccCC-CcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHH---HHHhCChhhH
Q 015283 239 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIV---ANVVGNPALF 313 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a---~~~l~~~~~~ 313 (410)
.+ +..++++ +++|.++ .|+ .+|.+++ ++++.+.+...-.. ...+++. ...++..++ ...+++++
T Consensus 257 ~~-gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~l~~i~~~~-- 325 (443)
T PRK07483 257 ED-GVAPDLV---TIAKGLG-AGYQPIGAVLA---SDRIYDAIADGSGFFQHGHTYL-GHATACAAALAVQRVIAEDG-- 325 (443)
T ss_pred hc-CCCCCee---eehhhhc-cCccccEEEEE---cHHHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHHHHHhcC--
Confidence 22 2234555 5699997 685 8898755 77755444321000 1122333 333333333 33333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------C------HHHHHHhhhcCcE
Q 015283 314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------N------KAQSDNMTNKWHV 377 (410)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~ll~~~gi 377 (410)
..++.++..++|.+.|+ ++-...+........|.+.-+.+ + ..+..++++ +|+
T Consensus 326 ---------l~~~~~~~g~~l~~~L~-~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gl 394 (443)
T PRK07483 326 ---------LLANVRARGEQLRARLR-ERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMA-RGL 394 (443)
T ss_pred ---------HHHHHHHHHHHHHHHHH-HHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHH-CCc
Confidence 23444445555555554 32100001111122233321111 0 123445555 699
Q ss_pred EEcCC--------C---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 378 YMTKD--------G---RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 378 ~v~~~--------g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+.+. | ||..+ .++++++++++++|.+++.++
T Consensus 395 l~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 395 MVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred EEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 98653 2 66543 249999999999999998753
No 324
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.65 E-value=1.3e-13 Score=128.19 Aligned_cols=280 Identities=17% Similarity=0.146 Sum_probs=177.0
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 151 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~ 151 (410)
......+.+.++++- + .+..+. +++|+.|+..+ ++..+.+||+|+++...|++....+. ..|.+
T Consensus 62 nPT~~~lE~~~a~LE-g-------~~~~~a--fsSGmaAI~~~--~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~ 129 (396)
T COG0626 62 NPTRDALEEALAELE-G-------GEDAFA--FSSGMAAISTA--LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE 129 (396)
T ss_pred CccHHHHHHHHHHhh-C-------CCcEEE--ecCcHHHHHHH--HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence 456678999999884 2 233444 59999999998 56668899999999999988765554 56666
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
+..++. .+.+..++.+.+ ++++++++-+|.|||-. ..|+.+|+++|+++|+++|+|+.|....+-
T Consensus 130 ~~~~d~-------~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~---v~DI~~i~~~A~~~g~~vvVDNTfatP~~q--- 194 (396)
T COG0626 130 VTFVDP-------GDDEALEAAIKE--PNTKLVFLETPSNPLLE---VPDIPAIARLAKAYGALVVVDNTFATPVLQ--- 194 (396)
T ss_pred EEEECC-------CChHHHHHHhcc--cCceEEEEeCCCCcccc---cccHHHHHHHHHhcCCEEEEECCccccccc---
Confidence 665543 244566666653 47888999999999988 567788888899999999999998765532
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 311 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~ 311 (410)
.++ ..+.+|++.|.+|.++-.+-=+|.+ ++++++++.+.+....... +-.......+..+.+-|+.-
T Consensus 195 -~PL-------~~GaDIVvhSaTKyl~GHsDvl~G~-v~~~~~~~~~~~~~~~~~~---~G~~l~p~dA~l~lRGlkTL- 261 (396)
T COG0626 195 -RPL-------ELGADIVVHSATKYLGGHSDVLGGV-VLTPNEELYELLFFAQRAN---TGAVLSPFDAWLLLRGLRTL- 261 (396)
T ss_pred -Chh-------hcCCCEEEEeccccccCCcceeeeE-EecChHHHHHHHHHHHHhh---cCCCCCHHHHHHHHhccchH-
Confidence 122 2236899999999997555445554 2456666555543332211 22233444444444444433
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc----------------CCcceeeecCCCHHHHHHhhhcC
Q 015283 312 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL----------------RQIGMFSFTGLNKAQSDNMTNKW 375 (410)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ll~~~ 375 (410)
.-..++..++...+.+.|+ +.+.-. -.+++ ..+|+|.|.=-+.+.+.+++++-
T Consensus 262 ---------~~Rm~~~~~nA~~IA~~L~-~~p~V~-~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L 330 (396)
T COG0626 262 ---------ALRMERHNENALKIAEFLA-DHPKVK-KVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSL 330 (396)
T ss_pred ---------HHHHHHHHHHHHHHHHHHh-cCCCeE-EEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhC
Confidence 2334455556666777776 543200 01111 14556655311214455555543
Q ss_pred cEEE---cCC-------------------------C------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 376 HVYM---TKD-------------------------G------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 376 gi~v---~~~-------------------------g------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.++. .=| | |+|++- |+++.+++-|+++++.+
T Consensus 331 ~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 331 KLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA 395 (396)
T ss_pred CccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence 3332 111 1 999854 89999999999998765
No 325
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.64 E-value=4.7e-14 Score=131.86 Aligned_cols=343 Identities=12% Similarity=0.040 Sum_probs=198.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCcc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|-.+|.--...|+. .+++.+++.++++. .+.+. +.......+|.+.+++..... +-+++.+ +.||
T Consensus 44 ~r~lDg~sg~W~~~~Gh~--~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~-----~l~~vFf--~~sG 114 (449)
T COG0161 44 RRYLDGMSGLWCVNHGHG--RPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEG-----GLDHVFF--TDSG 114 (449)
T ss_pred CEEEecccHHHHhhcCcC--CHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCC-----CccEEEE--eCCc
Confidence 466777776553445554 58899998888754 22111 112223567778888875422 1478999 9999
Q ss_pred hhHHHHHHHHHHHhC--CC----CEEEEcCCCCcch-hhhhhhCC-------------CCccceeeecC------CCcc-
Q 015283 112 TGSLRLAAALIERYF--PG----AKVLISSPTWGNH-KNIFNDAR-------------VPWSEYRYYDP------KTVG- 164 (410)
Q Consensus 112 t~a~~~~~~~~~~~~--~g----d~Vl~~~p~y~~~-~~~~~~~g-------------~~~~~v~~~~~------~~~~- 164 (410)
++|+++++++...+. .| .+++.-..+|.+- ...+...| ..+..++.... ..+.
T Consensus 115 SeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~ 194 (449)
T COG0161 115 SEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDE 194 (449)
T ss_pred hHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChH
Confidence 999999988776542 33 2377777777432 22222222 11222222110 1111
Q ss_pred ---cChhhHHHHHhcCC-CCcEEEEeCCCCCC-CCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 165 ---LDFEGMIADIKAAP-GGSFILLHGCAHNP-TGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 165 ---~d~~~l~~~i~~~~-~~~~~ii~~~p~NP-tG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
-..++|++++.++. ++...++.-....- +|+.+++.. |+++.++|++||+++|.||+-.+|+-. .+.+...
T Consensus 195 ~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRT---G~~FA~e 271 (449)
T COG0161 195 EFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRT---GKMFACE 271 (449)
T ss_pred HHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcC---chhhhhh
Confidence 23667888887765 55566664444445 787776666 999999999999999999999998843 2333222
Q ss_pred HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH-HHhhccCcccCCChhHHHHH---HHHhCChhhHH
Q 015283 239 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ-LKRLARPMYSNPPVHGARIV---ANVVGNPALFD 314 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~ 314 (410)
.+ +-.++.+ +++|.++-.=+.+|.+++ ++++.+.+... ........+.+...++..++ ..+++++
T Consensus 272 ~~-gi~PDi~---~~aKGLT~GY~Pl~a~l~---~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e---- 340 (449)
T COG0161 272 HA-GIVPDIL---CLAKGLTGGYLPLSAVLT---SDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEE---- 340 (449)
T ss_pred hc-CCCCCee---eecccccccchhhHhHhh---hHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhc----
Confidence 21 2234555 678988644466677543 66766666553 11111122223334443433 2333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCcccccCCcceeeecCC----C---------HHHHHHhhhcCcEEEc
Q 015283 315 EWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSFILRQIGMFSFTGL----N---------KAQSDNMTNKWHVYMT 380 (410)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~----~---------~~~~~~ll~~~gi~v~ 380 (410)
...++.++...++.+.|+ + +.- .+..-..+..|++.-+.+ . ...+.+...++|+.++
T Consensus 341 -------~l~~~~~~~~~~l~~~L~-~~l~~-~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iR 411 (449)
T COG0161 341 -------DLLERVAEIGAYLQAGLQ-AALAD-HPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIR 411 (449)
T ss_pred -------CHHHHHHHHHHHHHHHHH-Hhccc-CCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEe
Confidence 445566677777777777 5 220 112222334454433322 1 2234444445799999
Q ss_pred CCC-eEEec---CCCcccHHHHHHHHHHHhhh
Q 015283 381 KDG-RISLA---GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 381 ~~g-Ris~~---~~~~~~i~~~~~~l~~~l~~ 408 (410)
|.| -+-++ .+|++|++++++++++++++
T Consensus 412 p~g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 412 PLGDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred ecCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 998 33322 24999999999999999875
No 326
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.64 E-value=1.9e-14 Score=148.76 Aligned_cols=334 Identities=13% Similarity=0.105 Sum_probs=193.7
Q ss_pred eeecCCCccccc-HHHHHHHHHhhcc----CCCccCc----CCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChh
Q 015283 43 AYRTEELQPYVL-DVVKKAENLMLER----GENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 112 (410)
Q Consensus 43 ~~~~~~~~~~~~-~~v~~a~~~~~~~----~~~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt 112 (410)
.|+|..+.++.+ ..+.+++.+.... .+ ..|. ...-+.+.|+.+++++.... .+ .|+| |+|+|
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~-----~~~~VvF--tsnaT 107 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPP-----SDYACVF--TSGAT 107 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCc-----cceEEEE--eCChH
Confidence 567777766544 4555655554321 11 1121 12236788899999875431 23 5788 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecC------CCcccCh--hhHHHHHh----c-
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDP------KTVGLDF--EGMIADIK----A- 176 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~------~~~~~d~--~~l~~~i~----~- 176 (410)
+++.+++..+ .+.+||+|+++.-.|.+... .++..|+++..++.... ....+++ +.+++.++ .
T Consensus 108 ~alnlva~~l-~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~ 186 (805)
T PLN02724 108 AALKLVGETF-PWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKR 186 (805)
T ss_pred HHHHHHHHHC-CCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccc
Confidence 9999974332 25689999998777765543 33456888888876311 1122332 45555431 1
Q ss_pred --CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc-----CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 177 --APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK-----NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 177 --~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
..+++++++++..+|.||...|.+.++.+.+.++.+ ++++++|.+ +..+..+.+ + ...+.+++
T Consensus 187 ~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaa-Q~~g~~piD-----v----~~~~~Dfl 256 (805)
T PLN02724 187 EDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAA-KGCGTSPPD-----L----SRYPADFV 256 (805)
T ss_pred cccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehh-hhcCCCCCC-----h----hhcCCCEE
Confidence 123567888899999999999987655544433322 367999999 444422121 1 22346889
Q ss_pred Eeccccccc-ccCCCcceEEEEeCCchhHHHHHHHHHhh--------------------ccCcccCCChhHHHHHHHHhC
Q 015283 250 AQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRL--------------------ARPMYSNPPVHGARIVANVVG 308 (410)
Q Consensus 250 ~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~a~~~l~ 308 (410)
+.|..|.+| +.| +|++++ +++..+.+...+... .+...++++..+..++...++
T Consensus 257 ~~S~HK~~GgP~G--~G~L~v---r~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~ 331 (805)
T PLN02724 257 VVSFYKIFGYPTG--LGALLV---RRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK 331 (805)
T ss_pred EEecceeccCCCC--ceEEEE---ehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH
Confidence 999999998 556 588865 556544443211100 000011222222222222221
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-CC--CcccccC---------Ccceeeec--CC-----CHHHHH
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-GK--DWSFILR---------QIGMFSFT--GL-----NKAQSD 369 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~-~~--~~~~~~~---------~~~~~~~~--~~-----~~~~~~ 369 (410)
+.. .-.++++.++.+++.+++.+.|+ ++.- .+ .+.++.+ .++.+.|. +. ....+.
T Consensus 332 ---~l~--~ig~~~I~~~~~~L~~~l~~~L~-~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~ 405 (805)
T PLN02724 332 ---LLN--RLTISAIAMHTWALTHYVANSLR-NLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVE 405 (805)
T ss_pred ---HHH--HhChHHHHHHHHHHHHHHHHHHH-hccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHH
Confidence 111 01246778888999999999988 7630 00 1233322 33444432 32 345566
Q ss_pred HhhhcCcEEEcC-----------------------------------------CC--eEEecCC-CcccHHHHHHHHHHH
Q 015283 370 NMTNKWHVYMTK-----------------------------------------DG--RISLAGL-SLAKCEYLADAIIDS 405 (410)
Q Consensus 370 ~ll~~~gi~v~~-----------------------------------------~g--Ris~~~~-~~~~i~~~~~~l~~~ 405 (410)
.++.++||.++. .| |+|++.. |.+|++++++.|++.
T Consensus 406 ~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 406 KLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS 485 (805)
T ss_pred HHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence 666666777622 14 8887753 889999999999986
Q ss_pred h
Q 015283 406 Y 406 (410)
Q Consensus 406 l 406 (410)
.
T Consensus 486 ~ 486 (805)
T PLN02724 486 F 486 (805)
T ss_pred h
Confidence 5
No 327
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=1.1e-13 Score=132.83 Aligned_cols=158 Identities=17% Similarity=0.116 Sum_probs=114.2
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCCCc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW 152 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~ 152 (410)
.....+++.++++... ...+++ ++|+.|+.++ +...+.+||+|+++...|.+.. ..+...|.++
T Consensus 69 pt~~~le~~la~l~g~-------~~~v~f---sSG~~Ai~~a--l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v 136 (437)
T PRK05613 69 PTVEALENRIASLEGG-------VHAVAF---ASGQAAETAA--ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEV 136 (437)
T ss_pred hHHHHHHHHHHHHhCC-------CeEEEe---CCHHHHHHHH--HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEE
Confidence 3457888889888533 234555 6777888766 4455789999999999998774 3446788888
Q ss_pred cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC
Q 015283 153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 232 (410)
Q Consensus 153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 232 (410)
..++. . .|++.+++.+++ +++++++.++.||+|.+. ++++|+++|+++|+++|+|.++..... .
T Consensus 137 ~~vd~--~----~d~e~l~~~l~~---~tk~V~~e~~~Np~~~v~---di~~I~~la~~~gi~livD~t~a~g~~----~ 200 (437)
T PRK05613 137 TFVEN--P----DDPESWQAAVQP---NTKAFFGETFANPQADVL---DIPAVAEVAHRNQVPLIVDNTIATAAL----V 200 (437)
T ss_pred EEECC--C----CCHHHHHHhCCc---cCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCeEEEECCCccccc----c
Confidence 87762 2 278899988875 577777788999999844 566777789999999999999643221 1
Q ss_pred chhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
. ++ ....++++.|++|.++..|..+|.+++
T Consensus 201 ~--p~-----~~GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 201 R--PL-----ELGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred C--hH-----HhCCCEEEeeccceecCCCcceeEEEE
Confidence 1 11 123578899999999877766677643
No 328
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.63 E-value=1.3e-13 Score=133.68 Aligned_cols=339 Identities=15% Similarity=0.096 Sum_probs=180.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC-cc-CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~-y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|..-...|+. +|.+.+++.+++..... .. +.+.....++.+.+++...... .....+.+ +++|
T Consensus 58 ~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~---~~~~~~f~--~~SG 130 (459)
T PRK06931 58 NQYLDCLAGAGTLALGHN--HPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQG---KEYCLQFT--GPSG 130 (459)
T ss_pred CEEEEcccchhhccCCCC--CHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCcc---ccceEEEe--CCCc
Confidence 568899888643345654 58899998888754221 11 1122223345555554432110 00012344 6899
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CC------------CCccceeeecCCC--cc----cChhhH--
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKT--VG----LDFEGM-- 170 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~--~~----~d~~~l-- 170 (410)
++|++.+.++.+.+....+|+....+|.+....... .+ ..+..+|..+... +. -+.+.+
T Consensus 131 sEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (459)
T PRK06931 131 ADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTY 210 (459)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence 999999998888776667898888888766433221 11 1122222211000 00 112222
Q ss_pred --HHHHhc---CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 171 --IADIKA---APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 171 --~~~i~~---~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
++.+.. ..+....+++-..+.-.|... +..-++++.++|++||+++|.||+..+|+-. ...+....+ +..
T Consensus 211 ~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRt---G~~~a~~~~-gv~ 286 (459)
T PRK06931 211 YFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFART---GKMFAFEHA-GIE 286 (459)
T ss_pred HHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcC---chHHHhhhc-CCC
Confidence 233321 123456666555566667665 4555999999999999999999999988632 233333222 223
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH---HHhCChhhHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEME 321 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~---~~l~~~~~~~~~~~~~~ 321 (410)
++++ +++|.++ .|+.+|.+.. +++ ++.+. .....++++ ...++..++. ..+.+++
T Consensus 287 PDiv---t~gK~l~-gG~Pi~av~~---~~~-~~~~~---~~~~~~T~~-gnpla~aaala~L~~l~~~~---------- 344 (459)
T PRK06931 287 PDII---VMSKAVG-GGLPLAVLGI---KKE-FDAWQ---PGGHTGTFR-GNQLAMATGLTTLKILKEEN---------- 344 (459)
T ss_pred CCEE---Eeccccc-CCcceeeeee---HHH-Hhhcc---CCCCCCCCC-CCHHHHHHHHHHHHHHHhCC----------
Confidence 4555 5799998 6899987633 444 23221 112223333 3334334433 3333332
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------------CH----HHHHHhhhcCcEEEcCC
Q 015283 322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------------NK----AQSDNMTNKWHVYMTKD 382 (410)
Q Consensus 322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~~ll~~~gi~v~~~ 382 (410)
..++.++..++|.+.|+ ++....++.......|.+.-+.+ +. .+...+++ .|+.+.+.
T Consensus 345 -l~~~~~~~G~~l~~~L~-~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~ 421 (459)
T PRK06931 345 -LAQNAAERGEWLKAQLA-ELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFE-NGLLLERG 421 (459)
T ss_pred -HHHHHHHHHHHHHHHHH-HHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHH-CCcEEeec
Confidence 22344444444444444 33100011111122233321111 11 12334454 69999764
Q ss_pred C------eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 383 G------RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 383 g------Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
+ |+..+. +++++++++++++.+++.+
T Consensus 422 ~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 422 GRNGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred CCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 3 665442 4999999999999999875
No 329
>PRK04311 selenocysteine synthase; Provisional
Probab=99.61 E-value=4.2e-13 Score=129.23 Aligned_cols=343 Identities=15% Similarity=0.091 Sum_probs=194.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
.++||..-..++++.+.+++++.+.+++.+.+.......|.- ..-+..+++.+++++.. +..++ +
T Consensus 79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--------e~a~v--v 148 (464)
T PRK04311 79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--------EDALV--V 148 (464)
T ss_pred cceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--------CeEEE--E
Confidence 367887755677888888889999999988875432122221 11236788888888532 34555 6
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCc----c--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWG----N--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 182 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~----~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 182 (410)
++|+.|+.++ +..+.+||+|+++...+. . ....++..|++++.++..+ ..+++++++.+++ +++
T Consensus 149 ~sgtaAl~l~---l~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~---~Tk 218 (464)
T PRK04311 149 NNNAAAVLLA---LNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINE---NTA 218 (464)
T ss_pred CCHHHHHHHH---HHHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCc---cCe
Confidence 8899888876 345689999999876433 1 2335567899988887532 2468889998875 678
Q ss_pred EEEeCCCCCCC--CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC---CCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 183 ILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS---LDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 183 ~ii~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++++.+++||+ |.. ...++++|+++|++||+++++|.+...+.... ....+ .+.... ..+.+++++|.+|.+
T Consensus 219 lV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l-~~GaDiv~fSg~K~L 295 (464)
T PRK04311 219 LLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELL-AAGVDLVTFSGDKLL 295 (464)
T ss_pred EEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-chhhHH-hcCCcEEEecCcccc
Confidence 88888999984 531 23568888899999999999999733321100 00011 111111 234679999999998
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhH-HHHHH-HHhCChhhHHHH--HHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHG-ARIVA-NVVGNPALFDEW--KAEMEMMAGRIKNVRQK 333 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~-~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~ 333 (410)
|-| ..|++++ +++++++++.. ...+.....-..++ ..+.. ..+...+..... .+-+....++..++...
T Consensus 296 gGp--~~G~i~g---~~~li~~l~~~--~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~ 368 (464)
T PRK04311 296 GGP--QAGIIVG---KKELIARLKKH--PLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAER 368 (464)
T ss_pred cCC--ceEEEEE---cHHHHHHHhhc--hhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHH
Confidence 744 4687644 77766665421 11111111111111 11111 112111100000 00111222445556666
Q ss_pred HHHHhhhccCCCC-CcccccC----Ccc------ee---eec---CCCHHHHHHhhhcC--cEEEcCC-C--eEEecCCC
Q 015283 334 LFDSLSAKDKSGK-DWSFILR----QIG------MF---SFT---GLNKAQSDNMTNKW--HVYMTKD-G--RISLAGLS 391 (410)
Q Consensus 334 l~~~l~~~~g~~~-~~~~~~~----~~~------~~---~~~---~~~~~~~~~ll~~~--gi~v~~~-g--Ris~~~~~ 391 (410)
+.+.|+ .....+ ...+... .+| +. +-+ +++...+.+.|++. .|+.+-. + .+.+.++.
T Consensus 369 la~~L~-~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~~~~~~ld~r~~~ 447 (464)
T PRK04311 369 LAAALK-AALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIEDGRLLLDLRTLE 447 (464)
T ss_pred HHHHHH-hccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEECCEEEEEeCcCC
Confidence 666665 432100 0111111 011 11 111 23455555555542 4555432 3 44566778
Q ss_pred cccHHHHHHHHHHHhh
Q 015283 392 LAKCEYLADAIIDSYH 407 (410)
Q Consensus 392 ~~~i~~~~~~l~~~l~ 407 (410)
++|++.++++|++++.
T Consensus 448 ~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 448 EEDEERLAAALLEALN 463 (464)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 8999999999998864
No 330
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.61 E-value=3.2e-13 Score=130.50 Aligned_cols=337 Identities=11% Similarity=0.051 Sum_probs=180.2
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHH--HHHHhhccC-----CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEE
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKK--AENLMLERG-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 105 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~--a~~~~~~~~-----~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~ 105 (410)
+...+|+..|.--...|+. .|.+.+ ++.+++..- ....| ......++.+.+++..... ..+.+.+
T Consensus 44 G~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~ql~~l~~~~~~~~~~-~~~~~~~la~~l~~~~~p~-----~~~~v~f 115 (443)
T PRK08297 44 GRRYLDMFTFFASSALGMN--HPALADDPEFRAELGRAALNKPSNSDV-YTVEMARFVDTFARVLGDP-----ELPHLFF 115 (443)
T ss_pred CCEeeecccCHhhhcCCCC--ChHHhhHHHHHHHHHHhhhhccccCCc-CCHHHHHHHHHHHhhcCCC-----CCCEEEE
Confidence 3467788776543344554 477877 777766431 10112 2223344555555542111 1368999
Q ss_pred EecCChhhHHHHHHHHHHHhC------CC------CEEEEcCCCCcchhhhhh-hCCCCc-----------cceeeec--
Q 015283 106 VQGLSGTGSLRLAAALIERYF------PG------AKVLISSPTWGNHKNIFN-DARVPW-----------SEYRYYD-- 159 (410)
Q Consensus 106 ~~t~ggt~a~~~~~~~~~~~~------~g------d~Vl~~~p~y~~~~~~~~-~~g~~~-----------~~v~~~~-- 159 (410)
+++|++|++.+.++.+.+. .| .+|+....+|.+...... ..|... ..++...
T Consensus 116 --~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK08297 116 --VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLR 193 (443)
T ss_pred --eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCC
Confidence 9999999999988886552 12 578888888866543222 221100 0011000
Q ss_pred ----CCC----c---ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 160 ----PKT----V---GLDFEGMIADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 160 ----~~~----~---~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
..+ . .-+++.+++.+.+.+++...+++...+...|.. ++...++++.++|++||+++|.||++.+|+-
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR 273 (443)
T PRK08297 194 FPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL 273 (443)
T ss_pred CCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 000 0 012455566676555566777765556556765 5666799999999999999999999998863
Q ss_pred CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH--hhccCcccCCChhHHHHHHH
Q 015283 228 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK--RLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~ 305 (410)
. ...+....+ +..++++ +++|.++ +|.+ +. .+++.+.+...+. ....+++ +.+.++..++..
T Consensus 274 t---G~~~a~~~~-gv~PDiv---~~gK~l~-----~~a~--l~-~~~i~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a 337 (443)
T PRK08297 274 T---GTAWAYQQL-GVRPDIV---AFGKKTQ-----VCGI--MA-GRRVDEVEDNVFAVSSRINSTW-GGNLVDMVRARR 337 (443)
T ss_pred c---chHHHHHhc-CCCCCEE---Eeccccc-----ccce--ec-chHHHHhhhhhccCccccCCCC-CccHHHHHHHHH
Confidence 2 233333222 2234544 4799874 2333 22 3332211111111 1122233 233344444433
Q ss_pred HhC---ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-cc-cccCCcceeeecCC-C----HHHHHHhhhcC
Q 015283 306 VVG---NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD-WS-FILRQIGMFSFTGL-N----KAQSDNMTNKW 375 (410)
Q Consensus 306 ~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~-~~~~~~~~~~~~~~-~----~~~~~~ll~~~ 375 (410)
.|+ +. ...++.++..+++.+.|+ ++....+ +. ..... |.+..+.+ + ..+..++++ +
T Consensus 338 ~L~~l~~~-----------~l~~~~~~~g~~l~~~L~-~l~~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~-~ 403 (443)
T PRK08297 338 ILEVIEED-----------GLVENAARQGEYLLARLE-ELAAEFPAVVSNVRGR-GLMCAFDLPTTADRDEVIRRLWE-E 403 (443)
T ss_pred HHHHHHhc-----------CHHHHHHHHHHHHHHHHH-HHHHHCCCcceeeecc-ceEEEEEecCHHHHHHHHHHHHH-C
Confidence 332 22 233444455555555554 3311000 11 22233 44443333 2 234556664 6
Q ss_pred cEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 376 HVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 376 gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
||.+.|.| ||+.+. .|++++++++++|.+++.++
T Consensus 404 Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 404 GVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 99998865 675332 49999999999999998765
No 331
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.61 E-value=3.2e-15 Score=135.41 Aligned_cols=252 Identities=18% Similarity=0.063 Sum_probs=161.9
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 133 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~ 133 (410)
.|.+.+++.++... . ..|.......++++.+++++.. +..++ +.+||.++.++.+.+ +.|++.|++
T Consensus 8 ~~~m~~a~~~a~~g-d-~~Yg~D~~~~~l~~~i~~l~g~--------e~a~f--~~sGT~An~~al~~~--~~~~~~vi~ 73 (290)
T PF01212_consen 8 TPAMLEAMAAANVG-D-DAYGEDPTTARLEERIAELFGK--------EAALF--VPSGTMANQLALRAH--LRPGESVIC 73 (290)
T ss_dssp -HHEEHHHHHTTSB---CCTTSSHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHHH--HHTTEEEEE
T ss_pred CHHHHHHHHccccC-C-cccCCChhHHHHHHHHHHHcCC--------CEEEE--eCCCChHHHHHHHHH--HhcCCceec
Confidence 58888888665533 3 4698888889999999999633 34557 789999999984433 579999999
Q ss_pred cCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q 015283 134 SSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPT-GIDPTPEQWEKIA 206 (410)
Q Consensus 134 ~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPt-G~~~~~~~l~~i~ 206 (410)
..+++....+ .....|.+++.++. .+.+.+|++++++.+.. +...+.++.+++|+|.. |+++|.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~--~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPS--DDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBE--CTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCC--cccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 9997754432 22457888888876 33377999999999877 33467888888898875 8899999999999
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHh
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 286 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 286 (410)
++|++||+.++.|.+....... .....+..+. ...+++..|++|.+++++ |.+ ++.+++.+++.....+.
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~~---~~~~~~~e~~--~~~D~v~~~~tK~~g~~~---Gav--l~~~~~~i~~~~~~~k~ 221 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAAA---ALGVSLAEIA--AGADSVSFGGTKNGGAPG---GAV--LAGNKEFIAKARRQRKR 221 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHHC---HHHHHHHHHH--TTSSEEEEETTSTT-SSS---EEE--EEESHHHHHHHHHHHHH
T ss_pred HHHHhCceEEEEehhhHHHhhh---cccccHHHHh--hhCCEEEEEEEccccccc---ceE--EEechHHHHHHHHHHHH
Confidence 9999999999999995332210 0111222222 235566679999987665 665 44477766655444332
Q ss_pred hccCcccCCChhHH-----HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 287 LARPMYSNPPVHGA-----RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 287 ~~~~~~~~~~~~~~-----~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
....+.... .+++ .++...++.. .....+..++.+.+.+.|+ .++
T Consensus 222 ~gg~~~~~G-~~~a~~~~~~~~l~~l~~~----------~~~~~~~~~~A~~La~~l~-~~~ 271 (290)
T PF01212_consen 222 LGGGMRQAG-VLAAAELYQFAALRALELW----------LERARHANAMAKRLAAGLE-ALG 271 (290)
T ss_dssp HTHHHHHTT-HHHHHHHHHHHHHCHEECS----------HHHHHCHHHHHHCHHHCHH-EEC
T ss_pred hccCeeecc-eeeeechhhHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHH-HCC
Confidence 222111111 1111 1222222221 2444566667888888998 887
No 332
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.60 E-value=3.8e-13 Score=126.96 Aligned_cols=274 Identities=15% Similarity=0.141 Sum_probs=163.0
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~ 150 (410)
..+...+|.+.++++... +..+. +++|+.|+.++ +.+.+.+||+|+++.+.|+... ..+...|.
T Consensus 62 ~~P~~~~lE~~la~leg~--------~~av~--~sSG~aAi~~a--l~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi 129 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENA--------EHALS--FSSGMGAITSA--ILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGI 129 (384)
T ss_pred CChhHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHHhcCc
Confidence 344567899999999533 23444 69999999988 4555889999999988776554 55667898
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
+++.++..+.+++.++ +++++++++.+|.|||+.+ .++++|+++|++++ +++|.++......
T Consensus 130 ~v~fvd~~~~~~~~l~-----------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~~~-- 191 (384)
T PRK06434 130 HVDYIDTDRLNSLDFD-----------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPYNQ-- 191 (384)
T ss_pred EEEEECCCChhheeec-----------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcccC--
Confidence 9888876322222221 1356778889999999984 67888888899998 4669996422211
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
. ++ ....++++.|.+|.++-+|--+|.++ +++++++.++++.... ......+...+..+...|+.-
T Consensus 192 --~--pl-----~~gaDivv~S~tK~i~G~~d~~gG~v-v~~~~~~~~~~~~~~~----~~G~~~~~~~A~l~~~gL~tL 257 (384)
T PRK06434 192 --N--PL-----DLGADVVIHSATKYISGHSDVVMGVA-GTNNKSIFNNLVERRK----TLGSNPDPIQAYLALRGLKTL 257 (384)
T ss_pred --C--ch-----hcCCCEEEeecccccCCCCCceEEEE-ecCcHHHHHHHHHHHH----hcCCCCCHHHHHHHHhCCCcH
Confidence 1 11 12367888999999975453344442 4666665555543221 111223333323333444432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc----------cCCcceeeecCC-CHHHHHHhhhcCcEEE
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI----------LRQIGMFSFTGL-NKAQSDNMTNKWHVYM 379 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~----------~~~~~~~~~~~~-~~~~~~~ll~~~gi~v 379 (410)
....++-.++...+.+.|+ ..+.-.. ..+ ...+|++.|- + ..+.+.++++.-.++.
T Consensus 258 ----------~~R~~r~~~~a~~~a~~L~-~~p~v~~-V~yPgl~~~~~~~~g~g~~~sf~-l~~~~~~~~f~~~l~l~~ 324 (384)
T PRK06434 258 ----------GLRMEKHNKNGMELARFLR-DSKKISN-VYYPDTEIGKKVLRGFGGMLSFE-LRSMEDVHKFIRNLEIPM 324 (384)
T ss_pred ----------HHHHHHHHHHHHHHHHHHH-cCCCccE-EECCChHHHHHhcCCCCceEEEE-ECCHHHHHHHHHhCCcce
Confidence 3444455556666667776 5542100 111 1234444332 2 3444445554333221
Q ss_pred -c------------CC-------------------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 380 -T------------KD-------------------G--RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 380 -~------------~~-------------------g--Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
. |. + |||++- |+.+.+++.|.++|.+
T Consensus 325 ~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl---Ed~~dLi~dl~~Al~~ 384 (384)
T PRK06434 325 VAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI---EDIDDLIKDIENALSK 384 (384)
T ss_pred EccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHhcC
Confidence 1 10 1 899854 8999999999998853
No 333
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=7.4e-13 Score=119.62 Aligned_cols=341 Identities=14% Similarity=0.098 Sum_probs=200.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
.+.||+..+.--...|+. .|++.+++.+....- + ...|...+ .-++.+.+.+.+.+. +.+.|.| .++|
T Consensus 56 ~EyiD~~ssw~~~~~Gha--npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~~-----~~~rvff--~nsG 125 (433)
T KOG1401|consen 56 KEYIDFTSSWAVTILGHA--NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGKG-----SAERVFF--CNSG 125 (433)
T ss_pred ceeeeeccceeccccCCC--CHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccCC-----CccEEEE--ecCC
Confidence 467888887653344554 699999988776542 2 22332222 334444444443222 3789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCC------EEEEcCCCCcchhh-hhhhCCCCccceeee---cC--CCcccChhhHHHHHhcCCC
Q 015283 112 TGSLRLAAALIERYFPGA------KVLISSPTWGNHKN-IFNDARVPWSEYRYY---DP--KTVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd------~Vl~~~p~y~~~~~-~~~~~g~~~~~v~~~---~~--~~~~~d~~~l~~~i~~~~~ 179 (410)
|+|++.+.++.+.+.--+ +++...-+|.+..- .+...+......|.. ++ ...--|...+++.++.++.
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~ 205 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence 999999988776654222 48888877755422 222222222222110 00 0011368899999998766
Q ss_pred CcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 180 GSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
...++|+-..+..-|..+ +++.++.|.+.|+++|+++|.||++.+|+- ....|....+ .-.+++. ++.|.++
T Consensus 206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR---~g~~~a~e~~-~~~PDI~---t~aK~L~ 278 (433)
T KOG1401|consen 206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGR---LGYGWAQEYF-GVTPDIT---TVAKPLG 278 (433)
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccc---cchHHHHHHh-CcCCcce---eehhhcc
Confidence 667777666676677665 556699999999999999999999998773 3345544333 2333444 7899998
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
.|+.+|...+ ++++.+.+......+...+++ +|..++..+ ....|.++++ +++..++-+..++.+.+
T Consensus 279 -gGlPigA~~v---~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~-------~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 279 -GGLPIGATGV---RDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPET-------LKNVSKIGKELRKLLDE 347 (433)
T ss_pred -CCceeEEEee---hHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHH-------HHHHHHHHHHHHHHHHH
Confidence 7899999765 777555554332222333333 343333222 2455556543 24555555666666666
Q ss_pred HhhhccCCCCCccccc-CCcceeeec----CC----C-----HHH----HHHhhhcCcEEEcCCCeEEecCCCcccHHHH
Q 015283 337 SLSAKDKSGKDWSFIL-RQIGMFSFT----GL----N-----KAQ----SDNMTNKWHVYMTKDGRISLAGLSLAKCEYL 398 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~-~~~~~~~~~----~~----~-----~~~----~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~ 398 (410)
.+. +.+. .... ...+.++.. +. + ..+ ...+++ .|+++.|-.-+++.. ++|.++++
T Consensus 348 ~~~-~~~~----~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~-~gv~i~P~~~l~~~~-~~E~i~~~ 420 (433)
T KOG1401|consen 348 YLK-KTPN----SICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLE-EGVRIAPIYLLTVEH-TPEVIQRL 420 (433)
T ss_pred Hhc-cCCC----ceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhccccc-ceEEEeccccccccC-cHHHHHHH
Confidence 665 4331 1111 222333211 11 1 111 223333 478888744344444 68889999
Q ss_pred HHHHHHHhhhc
Q 015283 399 ADAIIDSYHNV 409 (410)
Q Consensus 399 ~~~l~~~l~~~ 409 (410)
++.+.+.+.++
T Consensus 421 l~i~~~~l~~~ 431 (433)
T KOG1401|consen 421 LTILEKVLSAL 431 (433)
T ss_pred HHHHHHHHHHh
Confidence 99999888765
No 334
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.59 E-value=3.6e-13 Score=130.00 Aligned_cols=324 Identities=15% Similarity=0.127 Sum_probs=175.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...||+..|.--...|+. .|.+.+++.++++... .|. +.....++.+.+++.+.. .+.+.+ +++|+
T Consensus 48 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~--~~~~~~~~~~~la~~l~~~~p~-------~~~v~f--~~sGs 114 (431)
T PRK06209 48 NEYIEYGMGLRAVGLGHA--YPPVVEAVREALQDGC--NFTRPSAIELDAAESFLELIDG-------ADMVKF--CKNGS 114 (431)
T ss_pred CEEEEccccccchhcCCC--CHHHHHHHHHHHHhCc--CCCCCCHHHHHHHHHHHHhCCc-------cceEEE--ecCHH
Confidence 568899877543345665 5889999888876532 232 222222556666666421 257888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEc-CCCCcchhhh-----hhhCCCC------ccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLIS-SPTWGNHKNI-----FNDARVP------WSEYRYYDPKTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~-~p~y~~~~~~-----~~~~g~~------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 180 (410)
+|++.+.++.+.+....+|+.. .-+|..+... ....|.. +..++. .|++.+++.+.+.++.
T Consensus 115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~ 187 (431)
T PRK06209 115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRY-------NDIASLEALFEDHPGR 187 (431)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCC-------CCHHHHHHHHHhCCCC
Confidence 9999998888776544556554 2233221100 0001110 111111 2788898888654334
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 260 (410)
..++++. | ..|...+...+++|.++|++||+++|+||++.++... ........+..+++ .+++|.+| .
T Consensus 188 ~aavi~E-p--v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~-----~~g~~~~~gv~PDi---~t~gK~lg-g 255 (431)
T PRK06209 188 IACVILE-P--ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH-----MRGAQKLYGIVPDL---SCFGKALG-N 255 (431)
T ss_pred EEEEEEc-c--ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC-----cchhhHHhCCCcce---eeehhhhc-C
Confidence 5555543 2 2455777888999999999999999999998777532 11222212222333 47899998 5
Q ss_pred CCCcceEEEEeCCchhHHH--HHHHH-H-hhccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015283 261 AERIGAMNVVCSSSDLAAR--VKSQL-K-RLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQK 333 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (410)
|+.+|++++ ++++.+. +...- . .....++.+++.++..++ ...+.+++ ..++++++.++
T Consensus 256 G~p~~av~~---~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~-----------~~~~~~~~g~~ 321 (431)
T PRK06209 256 GFAVSALAG---KREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED-----------VIERLHEQGAK 321 (431)
T ss_pred CcccEEEEE---HHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC-----------HHHHHHHHHHH
Confidence 788888644 6664433 10000 0 011122222323333333 33444332 23344444444
Q ss_pred HHHHhh---hccCCCCCcccccCCccee--eec--C---C-CH----HHHHHhhhcCcEEEcCCCeEEecCCCcccHHHH
Q 015283 334 LFDSLS---AKDKSGKDWSFILRQIGMF--SFT--G---L-NK----AQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYL 398 (410)
Q Consensus 334 l~~~l~---~~~g~~~~~~~~~~~~~~~--~~~--~---~-~~----~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~ 398 (410)
+.+.|+ .+.+... .....+... .++ + . .. .+..++++ .|+++. .-+|+.. .|+++++++
T Consensus 322 l~~~L~~~~~~~~~~~---~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p-~l~is~~-ht~~dId~~ 395 (431)
T PRK06209 322 LAAGVNEAAAEHGLQD---HVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMP-SLVVSYA-HGDADIERT 395 (431)
T ss_pred HHHHHHHHHHhCCCCe---EEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCcccc-ccccccc-CCHHHHHHH
Confidence 444443 0233211 111111111 111 1 1 11 23455555 699873 3355543 499999999
Q ss_pred HHHHHHHhhhc
Q 015283 399 ADAIIDSYHNV 409 (410)
Q Consensus 399 ~~~l~~~l~~~ 409 (410)
+++|.+++..+
T Consensus 396 l~~l~~~l~~~ 406 (431)
T PRK06209 396 IDAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHHH
Confidence 99999988653
No 335
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.59 E-value=7.9e-15 Score=130.15 Aligned_cols=287 Identities=11% Similarity=0.095 Sum_probs=155.8
Q ss_pred cHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHh--CCC--CEEEEcCCCCcchhhhhhhCCCCcc
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERY--FPG--AKVLISSPTWGNHKNIFNDARVPWS 153 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~--~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~ 153 (410)
.++|.+.|.++ ++.-|..++.+ .|++ ..|+|+.+..+.-.+... ..+ -.|+...|.|+.|........-..
T Consensus 45 s~eL~~~Ir~L-H~~VGNAvt~gr~IV~--GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~- 120 (363)
T PF04864_consen 45 SPELERQIRRL-HRVVGNAVTDGRYIVF--GTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRL- 120 (363)
T ss_dssp -HHHHHHHHHH-HHHH-SB--TTSEEEE--ECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTT-
T ss_pred cHHHHHHHHHH-HHHhccccccCcEEEE--cCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccC-
Confidence 36888888888 55555555554 4666 677777777763333222 111 489999999999987655432221
Q ss_pred ceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCc
Q 015283 154 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 233 (410)
Q Consensus 154 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 233 (410)
+... =|..... +...+.+.+=++++||||.|.. .+.+ ++..+..+|.|-||-+--+.
T Consensus 121 -y~w~------Gda~~~~---~~~~~~~~IElVTSPNNPDG~l-----r~~V---~~g~~~k~I~D~AYYWPhyT----- 177 (363)
T PF04864_consen 121 -YKWA------GDASNFK---NSDNPSPYIELVTSPNNPDGQL-----REAV---LNGSSGKVIHDLAYYWPHYT----- 177 (363)
T ss_dssp -EEEE------EECCCGT---T-S-CCGEEEEEESS-TTT-----------S---STTTEEEEEEE-TT-STTTS-----
T ss_pred -cccc------ccHHhhc---cCCCCCCeEEEEeCCCCCcccc-----cchh---cCCCCcceeeeeeeeccccc-----
Confidence 2211 1111111 1111356666789999999982 2233 35556678999999876653
Q ss_pred hhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC---h
Q 015283 234 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN---P 310 (410)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~---~ 310 (410)
++ ....+.+|.++|+||.-|-+|-|+||. +.+++++++++..++.. .+.+.+.-+|.=++.+|+. .
T Consensus 178 --pI---~~~aD~DiMLFT~SK~TGHAGSR~GWA--lVKD~~Va~kM~~y~~l----nTiGvS~dsQLRa~kiLk~v~~~ 246 (363)
T PF04864_consen 178 --PI---TAPADHDIMLFTLSKLTGHAGSRFGWA--LVKDEEVAKKMTKYMEL----NTIGVSRDSQLRALKILKVVLDG 246 (363)
T ss_dssp --------S-B--SEEEEEHHHHCS-GGG-EEEE--EES-HHHHHHHHHHHHH----HCSS--HHHHHHHHHHHHHHHHH
T ss_pred --cc---CCCCCCceEEEEEecccCcccccccee--eecCHHHHHHHHHHHHH----hcccCcHHHHHHHHHHHHHHHhc
Confidence 21 123457899999999999999999998 67899988887776652 2335666666555555441 0
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-------CC---CcccccCCcceeeecCCCH---HHHHHhhhcCc
Q 015283 311 -ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-------GK---DWSFILRQIGMFSFTGLNK---AQSDNMTNKWH 376 (410)
Q Consensus 311 -~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~-------~~---~~~~~~~~~~~~~~~~~~~---~~~~~ll~~~g 376 (410)
+-...-.+.++--++..+++-..|.+.+. .-+. ++ .+.-......-|.|+.+.. +.+...|++.|
T Consensus 247 ~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~-~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~ 325 (363)
T PF04864_consen 247 YGTEKGTEDIFHFGYSTMRERWEKLRAAVS-ASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAK 325 (363)
T ss_dssp CCHHTTTTSHHHHHHHHHHHHHHHHHHHHC-CSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTT
T ss_pred ccCCCCccchHHHHHHHHHHHHHHHHHHHH-hcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCC
Confidence 00000001122233444445555555554 3221 00 0011112345588987742 35889999999
Q ss_pred EEEcCCC---------eEEecCCCcccHHHHHHHHHHH
Q 015283 377 VYMTKDG---------RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 377 i~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
|..+.|. |+|+-. ++++.+.++++|..+
T Consensus 326 I~tr~G~~fga~~ryVRlSml~-~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 326 IITRSGVLFGADSRYVRLSMLK-RDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEEEGGGGTS-TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred cccCCCCccCCCCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence 9999873 999877 899999999999764
No 336
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.59 E-value=3.3e-13 Score=120.93 Aligned_cols=333 Identities=15% Similarity=0.138 Sum_probs=191.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+-.|..-..-|+. .|++.+++.+.+.. .....|. ..-..++.+++++.+... -..+.| +++|
T Consensus 50 ~ryLD~f~Gi~tvslGHc--hP~v~~a~~kQl~~l~H~t~~~~-~~pi~~~Ae~L~s~~P~~------l~~vfF--~nsG 118 (442)
T KOG1404|consen 50 RRYLDAFGGIVTVSLGHC--HPDVVAAAVKQLKKLYHTTSGYL-NPPIHDLAEALVSKLPGD------LKVVFF--VNSG 118 (442)
T ss_pred ceeehhhCCeEEEEcCCC--ChHHHHHHHHhhhhhEEeecccc-CCcHHHHHHHHHHhCCCC------ceEEEE--ecCC
Confidence 345666666553344444 58888888877633 2223453 345668999999997554 355888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcch-hhhhhhCCCCccceee----------ecCC----CcccC---------h
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFNDARVPWSEYRY----------YDPK----TVGLD---------F 167 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~v~~----------~~~~----~~~~d---------~ 167 (410)
++|++++.++.+.+...-.++...-+|.+. ...+...|......+. ..++ -|+-+ .
T Consensus 119 sEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a 198 (442)
T KOG1404|consen 119 SEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYA 198 (442)
T ss_pred chHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHH
Confidence 999999987777766555666666565443 2222222222211111 0000 01111 1
Q ss_pred hhHHHHHhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 168 EGMIADIKAA-PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 168 ~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
+++++.+... +.....++.-+.+...|.+- ++--+++..++|+++|.++|.||+..+|+-. ..+|++..- +-.+
T Consensus 199 ~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRt---G~~wgfe~h-~v~P 274 (442)
T KOG1404|consen 199 KELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRT---GHMWGFESH-GVVP 274 (442)
T ss_pred HHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccc---ccccccccc-CCCc
Confidence 3444454433 33445555555566667654 5555999999999999999999999999843 366665331 1112
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~ 323 (410)
+. -|++|.+| .|+.+|.++. .+|+..-+.+... .++++. +|.+.+...+ ..+++. ++.
T Consensus 275 DI---vTmAKgiG-nG~Pl~AVvt---t~EIa~v~~~~~~--~fnTyggnP~a~avg~aVL~Vike-----------e~L 334 (442)
T KOG1404|consen 275 DI---VTMAKGIG-NGFPLGAVVT---TPEIADVLNQKSS--HFNTYGGNPVACAVGLAVLKVIKE-----------ENL 334 (442)
T ss_pred cH---HHHHhhcc-CCCcceeeec---CHHHHHHHHhccc--cccccCCCchhHHHHHHHHHHHHH-----------HhH
Confidence 33 38999999 7899999744 6775554444332 233443 4444333222 344333 244
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--------C-----HHHHHHhhhcCcEEEcCCC------e
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--------N-----KAQSDNMTNKWHVYMTKDG------R 384 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~~ll~~~gi~v~~~g------R 384 (410)
.++.++...+|.+.|. ++.-..++.-..+..|.++=+.+ . ...+.+-.++.|+.+-.|| |
T Consensus 335 qE~aa~vG~yl~~~l~-~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfr 413 (442)
T KOG1404|consen 335 QENAAEVGSYLLEKLA-ALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFR 413 (442)
T ss_pred HHHHHHHHHHHHHHHH-HHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEE
Confidence 5556666666666665 55321112112233444432211 1 1123344456899996665 8
Q ss_pred EEec-CCCcccHHHHHHHH
Q 015283 385 ISLA-GLSLAKCEYLADAI 402 (410)
Q Consensus 385 is~~-~~~~~~i~~~~~~l 402 (410)
|+.+ ..|++|++.+++..
T Consensus 414 iaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 414 IAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ecCCeeccHHHHHHHHHHH
Confidence 8743 24999998888754
No 337
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.59 E-value=1.3e-13 Score=142.18 Aligned_cols=299 Identities=11% Similarity=0.030 Sum_probs=186.6
Q ss_pred ccCcCC---cccH----HHHHHHHHHhcCCCCCcccCCceEEEecCChh----hHHHHHHHHHHHhC-CCC----EEEEc
Q 015283 71 KEYLPI---EGLA----AFNKVTAELLFGADNSVLKEQRVATVQGLSGT----GSLRLAAALIERYF-PGA----KVLIS 134 (410)
Q Consensus 71 ~~y~~~---~g~~----~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt----~a~~~~~~~~~~~~-~gd----~Vl~~ 134 (410)
|.|.|. +|+. ++|+.+++++ | .+.|.+ +++++ .++.++++.+ +. +|| .|+++
T Consensus 555 hp~~p~~~~~g~~~~~~~~r~~la~i~----g----~~~v~f--~pnaga~ge~a~~~vi~~~--~~~~Gd~~r~~vli~ 622 (993)
T PLN02414 555 HPFAPVDQAQGYQEMFEDLGDLLCEIT----G----FDSFSL--QPNAGAAGEYAGLMVIRAY--HLSRGDHHRNVCIIP 622 (993)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHh----C----CCeEEE--cCCCcHHHHHHHHHHHHHH--HhccCCCCCCEEEeC
Confidence 556663 3443 5555666653 3 267888 77777 5666664333 44 488 89999
Q ss_pred CCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015283 135 SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 214 (410)
Q Consensus 135 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 214 (410)
...+......+...|.+++.+++ ++++.+|+++|+++++++.++++++++++|+|-+|. ..++++|+++|+++|+
T Consensus 623 ~~aH~sn~a~a~~~G~~vv~v~~--d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~---e~~I~eI~~iah~~Ga 697 (993)
T PLN02414 623 VSAHGTNPASAAMCGMKIVVVGT--DAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVY---EEGIDEICDIIHDNGG 697 (993)
T ss_pred CCcCccCHHHHHHCCCEEEEecc--CCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccc---cchHHHHHHHHHHcCC
Confidence 99999998888889999999998 356689999999999865457788888999999999 5668888888999999
Q ss_pred cccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc----ccCCCcceEEEEeCCchhHHHHHHHHH-h---
Q 015283 215 IPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAMNVVCSSSDLAARVKSQLK-R--- 286 (410)
Q Consensus 215 ~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~l~~~~~~~~~~~~~~~~~~-~--- 286 (410)
++++|.++..-... . ......+.+++++|.+|.|+ ..|-.+|.+.+ .+++...+-.... .
T Consensus 698 lv~vDgAq~~a~~~-l--------~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~---~~~L~p~lPg~~v~~~~~ 765 (993)
T PLN02414 698 QVYMDGANMNAQVG-L--------TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVPTGG 765 (993)
T ss_pred EEEEEecCHHhccC-c--------CCccccCCCEEEecCCccCCcCcccCCCCeeeEEE---chhhcccCCCCccccCCC
Confidence 99999995321101 0 00123357788899999764 33455788754 5553322221110 0
Q ss_pred -hc--cCcccCC---Ch----hHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcc
Q 015283 287 -LA--RPMYSNP---PV----HGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIG 356 (410)
Q Consensus 287 -~~--~~~~~~~---~~----~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 356 (410)
.. ...+.+. +. ....++...+..-. .+.+++..++...+..++.+.|. +. .. +.+..+.+.
T Consensus 766 ~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG-----~~Gl~~~a~~a~~nAnYl~~rL~-~~-~~--~~~~~~~~~ 836 (993)
T PLN02414 766 IPRPEKTQPLGTISAAPWGSALILPISYTYIAMMG-----SEGLTDASKIAILNANYMAKRLE-GH-YP--VLFRGKNGT 836 (993)
T ss_pred cccccCCCCcCCccchhhhhHHHHHHHHHHHHHHC-----HhHHHHHHHHHHHHHHHHHHHHH-hh-CC--ccccCCCCC
Confidence 00 0000111 11 11122222222111 34567778888889999999997 52 21 233222222
Q ss_pred ee-----eecC------CC-HHHHHHhhhcCcEEEc----CCC---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 357 MF-----SFTG------LN-KAQSDNMTNKWHVYMT----KDG---RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 357 ~~-----~~~~------~~-~~~~~~ll~~~gi~v~----~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
.| -+.. .+ .++.++|+ ++|+... |.. |++..- .+++++|+++++|+++..+
T Consensus 837 ~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 837 CAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred eeeeEEEeccccccccCCCHHHHHHHHH-HcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 11 1111 22 44577777 4688652 322 887543 3889999999999888765
No 338
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.58 E-value=6e-13 Score=125.62 Aligned_cols=313 Identities=11% Similarity=0.025 Sum_probs=179.6
Q ss_pred CcccccHHHHHHHHHhhccCC-CccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEec-CChhhHHHHHHHHHHH
Q 015283 49 LQPYVLDVVKKAENLMLERGE-NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGTGSLRLAAALIER 124 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~-~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t-~ggt~a~~~~~~~~~~ 124 (410)
|+..+++++.+++.....+-. ..++.+ ..-+.+.|+.+++++.... ..+|++ + .+||.+++.+ +.+.
T Consensus 10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~-----~~~v~f--~~gs~T~a~~~~--~~~l 80 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPD-----GYEVIL--GNGGATAFWDAA--TFGL 80 (361)
T ss_pred CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCC-----CceEEE--ECCchhHHHHHH--HHhc
Confidence 556678999999765321100 122222 3346788888888875421 346776 5 5599999997 3333
Q ss_pred hCCCCEEEEcCCCCcc-hhhhhhhC--CCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283 125 YFPGAKVLISSPTWGN-HKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 201 (410)
Q Consensus 125 ~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~ 201 (410)
+.+ +.+++....|+. +...+... +.++..++. +++..++. .+. +++.++.+++.+|.||...|.++
T Consensus 81 ~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~pi~~ 149 (361)
T TIGR01366 81 IEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTA--DPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAVPVRR 149 (361)
T ss_pred ccc-cccEEecCHHHHHHHHHHHhhhccCCceEEec--CCCCCCCC-----ccC---CCCCEEEEcccCCccceeccccc
Confidence 433 444444555543 23333431 235666655 22222332 122 36778888999999999887655
Q ss_pred HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283 202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 281 (410)
Q Consensus 202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 281 (410)
+ ++++|+++++|.+ +.++..+.+ +. . .+++++|..|.+|.+|- ++.+++ +++.++++.
T Consensus 150 I------~~~~g~~~iVDav-qs~g~~~id-----v~----~--~D~~~~s~~K~lg~~~G-l~~~~~---s~~~~~~~~ 207 (361)
T TIGR01366 150 P------EGSDDALVVIDAT-SGAGGLPVD-----IA----E--TDVYYFAPQKNFASDGG-LWLAIM---SPAALERIE 207 (361)
T ss_pred c------cccCCCeEEEEcC-ccccCCCCC-----HH----H--CCEEEEEchhhcCCCCc-eEEEEE---CHHHHhhhh
Confidence 4 5889999999999 555533222 11 1 46788999999988741 333333 666665544
Q ss_pred HH----------H--H----hhccCcccCCChhHHH-HHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 282 SQ----------L--K----RLARPMYSNPPVHGAR-IVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 282 ~~----------~--~----~~~~~~~~~~~~~~~~-~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.. + . ......+.+.+.+... ++...++.-. .. .++...++.+++.+++.+.+. +.+
T Consensus 208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~-----~~gg~e~~~~r~~~l~~~l~~~l~-~~~ 281 (361)
T TIGR01366 208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMN-----GNGGLDWAVARTADSSSRLYSWAQ-ERP 281 (361)
T ss_pred cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHH-----HccCHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 21 1 0 0000112233333322 2222222110 11 145667888899999999998 887
Q ss_pred CCCCccccc----CCcceeeec-CCCHHHHHHhhhcCcEEEcCCC--------eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 344 SGKDWSFIL----RQIGMFSFT-GLNKAQSDNMTNKWHVYMTKDG--------RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 344 ~~~~~~~~~----~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~~g--------Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
....+.... +..+.+.|. +++.+.+...++++||.+.++. |||..+ .|.++++++++.|+++++++
T Consensus 282 ~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 282 YATPFVTDPGKRSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred CcccCCCChhhcccceEEEECCCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 311111001 111334443 3466665554466799998761 999665 58999999999999998763
No 339
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.57 E-value=3.4e-14 Score=133.07 Aligned_cols=214 Identities=18% Similarity=0.101 Sum_probs=131.8
Q ss_pred cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC
Q 015283 72 EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP 151 (410)
Q Consensus 72 ~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~ 151 (410)
-+.|..-+.+..+.+|+.|... .-..+ ++|+|.++.++ +++.+.+||+|+++.-|+-+....+...|++
T Consensus 61 L~~p~G~I~eAe~~aA~~fGAd-------~t~fl--vnGsT~g~~a~--i~a~~~~gd~VLv~RN~HkSv~~alil~ga~ 129 (417)
T PF01276_consen 61 LHDPEGIIKEAEELAARAFGAD-------KTFFL--VNGSTSGNQAM--IMALCRPGDKVLVDRNCHKSVYNALILSGAI 129 (417)
T ss_dssp TTTTBTHHHHHHHHHHHHHTES-------EEEEE--SSHHHHHHHHH--HHHHTTTTCEEEEETT--HHHHHHHHHHTEE
T ss_pred ccCCccHHHHHHHHHHHhcCCC-------eEEEE--ecCchHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCe
Confidence 3434444567777777775332 23444 78889999988 6667889999999999999999999999999
Q ss_pred ccceeeecCC---CcccCh-----hhHHHHHhcCCCCcE---EEEeCCCCCCC--CCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 152 WSEYRYYDPK---TVGLDF-----EGMIADIKAAPGGSF---ILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 152 ~~~v~~~~~~---~~~~d~-----~~l~~~i~~~~~~~~---~ii~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
+++++..+.+ ...++. +.+++.+++++.... ++++ ||| |. ..++++|+++|+++++.|++
T Consensus 130 Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt----~PTY~Gv---~~di~~I~~~~h~~~~~llv 202 (417)
T PF01276_consen 130 PVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLT----SPTYYGV---CYDIKEIAEICHKHGIPLLV 202 (417)
T ss_dssp EEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEE----SS-TTSE---EE-HHHHHHHHCCTECEEEE
T ss_pred EEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEe----CCCCCeE---EECHHHHHHHhcccCCEEEE
Confidence 9998664222 124556 889999988765544 5554 554 88 44677888889999999999
Q ss_pred cccCCCCC-CCCCCCchhHhHHHhh--cCCcEEEEecccccccccCCCcceEEEEeCCc-hhHHHHHHHHHhhccCcccC
Q 015283 219 DVAYQGFA-SGSLDNDASSVRLFAT--RGMELLVAQSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSN 294 (410)
Q Consensus 219 Deay~~~~-~~~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 294 (410)
||||.... |.+.... ......+ ....++++.|.+|.+ +++.-+.++.+..+. -..+++.+.+...+.+..+.
T Consensus 203 DEAhGah~~F~~lp~~--a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY 278 (417)
T PF01276_consen 203 DEAHGAHFGFHPLPRS--ALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSY 278 (417)
T ss_dssp E-TT-TTGGCSGGGTT--CSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--H
T ss_pred EccccccccCCCCccc--hhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHH
Confidence 99986543 2111000 0000011 123669999999996 577777776655554 34677777776554322222
Q ss_pred CChhHHHHHHHHh
Q 015283 295 PPVHGARIVANVV 307 (410)
Q Consensus 295 ~~~~~~~~a~~~l 307 (410)
+...+...+...+
T Consensus 279 ~lmASlD~a~~~m 291 (417)
T PF01276_consen 279 PLMASLDVARAQM 291 (417)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 2222334445555
No 340
>PLN02263 serine decarboxylase
Probab=99.57 E-value=3e-12 Score=121.96 Aligned_cols=299 Identities=11% Similarity=0.023 Sum_probs=191.8
Q ss_pred ccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 78 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 78 g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
+..++.+.+.+|+.+..+.+-+.-.-.+ |+|||+++..+....+...+...|++++-.+.++.+.+..+|.+++.||+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~v--tsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~ 207 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDT 207 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEE--eCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEecc
Confidence 5678999999998877765321113455 89999999998655655555557888999999999999999999999998
Q ss_pred ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCC-----cccccccCCCCCCCCCCC
Q 015283 158 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH-----IPFFDVAYQGFASGSLDN 232 (410)
Q Consensus 158 ~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~-----~li~Deay~~~~~~~~~~ 232 (410)
.+++.+|++.|++.+.+...++.+++.+....+||. .+++++|.++|+++|+ ++.+|.+|.++......
T Consensus 208 --d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GA---iDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~- 281 (470)
T PLN02263 208 --LVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGA---VDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK- 281 (470)
T ss_pred --CCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcC---CCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc-
Confidence 467889999999999764444667766778889999 7888899999999997 99999999887642111
Q ss_pred chhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH---HHHhhccCcccCCChhHHHHHH--HHh
Q 015283 233 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS---QLKRLARPMYSNPPVHGARIVA--NVV 307 (410)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~--~~l 307 (410)
....+ .....-+-+..+.+|.++.| ...|.+.+ ++ ...+.+.. ++... .. +...+.-+..++. ..|
T Consensus 282 ~~~~~---df~~~vDSIsvD~HK~l~~P-~~cgvll~--R~-~~~~~~~~~~~Yl~~~-d~-ti~gSR~g~~al~lW~~L 352 (470)
T PLN02263 282 RAPKV---TFKKPIGSVSVSGHKFVGCP-MPCGVQIT--RM-EHINVLSSNVEYLASR-DA-TIMGSRNGHAPIFLWYTL 352 (470)
T ss_pred ccccc---CCCcCccEEEECCccccCCC-cCEEEEEE--eh-hhHhhhccChHhhCCC-CC-CcCCCCCcHHHHHHHHHH
Confidence 11111 11112344566889988754 77777744 33 32222211 11111 11 1111221111111 111
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCC---e
Q 015283 308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG---R 384 (410)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g---R 384 (410)
+... .+.+++..++..++.+++.+.|+ +.|+ ..+..|.....+|..-..+. .. .|..+...+ +
T Consensus 353 ~~~G-----~~G~~~~i~~~~~~A~~l~~~l~-~~g~---~~~~~p~s~~V~f~~p~~~~----~~-~gW~L~~~~~~~H 418 (470)
T PLN02263 353 NRKG-----YRGFQKEVQKCLRNAHYLKDRLR-EAGI---SAMLNELSSTVVFERPKDEE----FV-RRWQLACQGNIAH 418 (470)
T ss_pred HHhC-----HHHHHHHHHHHHHHHHHHHHHHH-hCCC---eEEeCCCceEEEEecCchHH----hh-cceEEccCCCcEE
Confidence 1111 34456777788888899999998 8774 23444555544553222211 12 255554443 7
Q ss_pred EEecC-CCcccHHHHHHHHHHHhh
Q 015283 385 ISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 385 is~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
+++.. ++.+.++++++.|++..+
T Consensus 419 ivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 419 VVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHHh
Confidence 77554 588999999999988765
No 341
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=7.8e-13 Score=121.42 Aligned_cols=171 Identities=19% Similarity=0.165 Sum_probs=120.7
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 151 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~ 151 (410)
.+....+.+.+++.... .+.++ .++|+.|+..+ +...+.+|++|++.+.+|.....+++ ..|.+
T Consensus 76 nPt~~~le~~iaal~ga--------~~~l~--fsSGmaA~~~a--l~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie 143 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGA--------AHALL--FSSGMAAITVA--LLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGE 143 (409)
T ss_pred CCchHHHHHHHHHHhCC--------ceEEE--ecccHHHHHHH--HHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCce
Confidence 34456788888887422 23444 69999999888 45557799999999999999877766 45656
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
...+.. -|++++++.+++ ++.++++-+|.||+..+. |++++.++|+++|+++|+|+.+.....
T Consensus 144 ~~~vd~-------~~~~~~~~~i~~---~t~~V~~ESPsNPll~v~---DI~~l~~la~~~g~~vvVDnTf~~p~~---- 206 (409)
T KOG0053|consen 144 GDFVDV-------DDLKKILKAIKE---NTKAVFLESPSNPLLKVP---DIEKLARLAHKYGFLVVVDNTFGSPYN---- 206 (409)
T ss_pred eeeech-------hhHHHHHHhhcc---CceEEEEECCCCCccccc---cHHHHHHHHhhCCCEEEEeCCcCcccc----
Confidence 655554 156777777775 788899999999999955 566677778999999999999876642
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ 283 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 283 (410)
.+++ ..+.+|++.|.+|.++-.+-=+|.++ +.+.++...+++..
T Consensus 207 ~~pL-------~lGADIV~hSaTKyi~Ghsdvi~G~i-v~n~~~~~~~l~~~ 250 (409)
T KOG0053|consen 207 QDPL-------PLGADIVVHSATKYIGGHSDVIGGSV-VLNSEELASRLKFL 250 (409)
T ss_pred cChh-------hcCCCEEEEeeeeeecCCcceeeeEE-ecCcHHHHHHHHHH
Confidence 1222 12368999999999964444344442 34446755555443
No 342
>PRK15029 arginine decarboxylase; Provisional
Probab=99.55 E-value=7.1e-13 Score=133.10 Aligned_cols=218 Identities=13% Similarity=0.051 Sum_probs=134.8
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV 150 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~ 150 (410)
.-+.|..-+.+..+.+|+.|... .-..+ ++|+|.++.++ +++.+.+||+|+++.-||-+....+...|+
T Consensus 199 ~L~~p~G~I~eAq~~aA~~fgA~-------~t~Fl--vNGST~gn~a~--i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga 267 (755)
T PRK15029 199 SLLDHTGAFGESEKYAARVFGAD-------RSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLILTGA 267 (755)
T ss_pred CCCCCCcHHHHHHHHHHHHhCCC-------cEEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCC
Confidence 33434444456666666665332 22333 68999998877 666788999999999999999999999999
Q ss_pred CccceeeecCCCc----ccC-----hhhHHHHHhcCCCCc--------EEEEeCCCCCCC--CCCCCHHHHHHHHHHHHH
Q 015283 151 PWSEYRYYDPKTV----GLD-----FEGMIADIKAAPGGS--------FILLHGCAHNPT--GIDPTPEQWEKIADVIQE 211 (410)
Q Consensus 151 ~~~~v~~~~~~~~----~~d-----~~~l~~~i~~~~~~~--------~~ii~~~p~NPt--G~~~~~~~l~~i~~~~~~ 211 (410)
++++++-.- +.+ .++ ++.+++.+.+++... .++++ ||| |++. ++++|+++|++
T Consensus 268 ~Pvyl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt----~PTY~Gv~~---di~~I~~~~h~ 339 (755)
T PRK15029 268 KPVYMVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVT----NCTYDGVCY---NAKEAQDLLEK 339 (755)
T ss_pred eEEEecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEE----CCCCcceee---CHHHHHHHHHh
Confidence 999884321 222 334 888988887754332 34443 554 8855 56677888999
Q ss_pred cCCcccccccCCCCC-CCCCCCchhHhHH-Hhh-cCCcEEEEecccccccccCCCcceEEEEeCCc--hhHHHHHHHHHh
Q 015283 212 KNHIPFFDVAYQGFA-SGSLDNDASSVRL-FAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSSS--DLAARVKSQLKR 286 (410)
Q Consensus 212 ~~~~li~Deay~~~~-~~~~~~~~~~~~~-~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~--~~~~~~~~~~~~ 286 (410)
+++.|++||||.... +.+.-+....+.. ... .+.+++++.|.+|++ |++.-|.++.+.++. -..+++...+..
T Consensus 340 ~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~~ 417 (755)
T PRK15029 340 TSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMM 417 (755)
T ss_pred cCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHHH
Confidence 999999999986543 3211010011100 001 223569999999996 567777765553331 123567777765
Q ss_pred hccCcccCCChhHHHHHHHHhCC
Q 015283 287 LARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 287 ~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
++.+..+.+...+..++...+..
T Consensus 418 ~qSTSPSY~LmASLD~ar~~m~~ 440 (755)
T PRK15029 418 HATTSPLYAICASNDVAVSMMDG 440 (755)
T ss_pred HcCCCcHHHHHHHHHHHHHHHhh
Confidence 54332223333344445555553
No 343
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.55 E-value=2.2e-12 Score=124.02 Aligned_cols=218 Identities=15% Similarity=0.083 Sum_probs=141.4
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
++||..--.++++.+.+++++.+.+++.+.+.......|.- ..-+..+++.+++++... . .++ ++
T Consensus 75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae-------~-alv--v~ 144 (454)
T TIGR00474 75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE-------D-ALV--VN 144 (454)
T ss_pred ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC-------c-EEE--EC
Confidence 56776544667788888889999999988775422122211 112468888898886332 2 334 57
Q ss_pred ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc------hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283 110 SGTGSLRLAAALIERYFPGAKVLISSPTWGN------HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 183 (410)
+|+.|+.++ +..+.+||+|+++...|.. +...++..|++++.++..+ ..+++++++.+++ ++++
T Consensus 145 sg~aAi~l~---l~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~---~T~l 214 (454)
T TIGR00474 145 NNAAAVLLA---LNTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITE---NTAL 214 (454)
T ss_pred CHHHHHHHH---HHHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCc---CCEE
Confidence 888888776 3457899999999866422 2345567899888886522 2478899988875 6888
Q ss_pred EEeCCCCCCC--CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC---CCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 184 LLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS---LDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 184 ii~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
++..+++|++ |.. ...++++|+++|++||+++++|.+...+...+ ....+ .+.... ..+.+++++|.+|.+|
T Consensus 215 v~~~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p-~~~~~~-~~GaDiv~fSg~K~Lg 291 (454)
T TIGR00474 215 LLKVHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEP-TVQEVI-AAGVDLVTFSGDKLLG 291 (454)
T ss_pred EEEEccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCc-ccccHh-HcCCCEEEecCccccC
Confidence 8888999996 531 13467788888999999999998632221100 00001 111111 2245688999999986
Q ss_pred ccCCCcceEEEEeCCchhHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
-| ..|++++ +++.++++
T Consensus 292 Gp--~~G~i~g---~~~~i~~l 308 (454)
T TIGR00474 292 GP--QAGIIVG---KKELIERL 308 (454)
T ss_pred CC--eEEEEEE---CHHHHHhh
Confidence 44 3687644 66765544
No 344
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.53 E-value=1.9e-12 Score=124.80 Aligned_cols=335 Identities=13% Similarity=0.100 Sum_probs=178.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHh-hccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLM-LERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~-~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+|+..|..-...|+. +|.+.+++.+. .... +...| ......++.+.+++.+..... -..+.+.+ +++
T Consensus 58 ~~ylD~~sg~~~~~lGh~--~p~i~~Ai~~q~~~~~l~~~~~~-~~~~~~~la~~l~~~l~~~~p--~~~~~v~f--~~S 130 (464)
T TIGR00699 58 NRLLDLYSQISSIPIGYN--NPALLKAAQSPEMATTLINRPAL-GNFPSKDWAKILKEGILKVAP--KGQDQVWT--GMS 130 (464)
T ss_pred CEEEEccCCHhhhcCCCC--CHHHHHHHHHHHHHHhhcccccC-CcHHHHHHHHHHHHhHHhhCC--CCcCEEEE--eCC
Confidence 467888887654455654 58888888763 2221 11222 122233455554432222111 01367889 999
Q ss_pred hhhHHHHHHHHHHHhC------------------------CC---CEEEEcCCCCcchhhh-hhhCCC-----------C
Q 015283 111 GTGSLRLAAALIERYF------------------------PG---AKVLISSPTWGNHKNI-FNDARV-----------P 151 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~------------------------~g---d~Vl~~~p~y~~~~~~-~~~~g~-----------~ 151 (410)
|++|++.+.++.+.+. +| .+|+....+|.+.... +...|. .
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 9999999988886541 11 2688888888655332 211111 0
Q ss_pred ccceeeecCC-C-----------cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccc
Q 015283 152 WSEYRYYDPK-T-----------VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 152 ~~~v~~~~~~-~-----------~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~ 218 (410)
+..+|..... . ..-+++.+++.+.+.++...++++...+...|... +.+-++++.++|++||+++|+
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 1111111000 0 00135667777765444567777666677778777 455599999999999999999
Q ss_pred cccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCCh
Q 015283 219 DVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPV 297 (410)
Q Consensus 219 Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (410)
||++.+|+.. ...+....+.-. .++++ +++|.++..| ++ +. .+. +.........+++. .+.
T Consensus 291 DEV~tGfGrt---G~~fa~e~~gv~~~PDi~---t~gK~lg~gG----~~--~~-~~~----~~~~~~~~~~~T~~-gnp 352 (464)
T TIGR00699 291 DEVQTGVGAT---GKFWAHEHWNLDDPPDMV---TFSKKFQTAG----YF--FH-DPA----FRPNKPYRQFNTWM-GDP 352 (464)
T ss_pred eeeeeCCCCC---cchhHHHhcCCCCCCCEE---EehhhhccCC----cc--cc-chh----ccCCCCcccccCCC-CCH
Confidence 9999888642 233333222111 13443 6799985334 32 11 221 11100111222332 333
Q ss_pred hHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC--ccccc-CCcceeeecCC-C----HH
Q 015283 298 HGARIVA---NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD--WSFIL-RQIGMFSFTGL-N----KA 366 (410)
Q Consensus 298 ~~~~~a~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~~-~~~~~~~~~~~-~----~~ 366 (410)
++..++. ..+.++ ...++.++..+++.+.|+ ++....+ +.... ...|.+.-+.+ + ..
T Consensus 353 ~~~aaa~a~L~~l~~~-----------~l~~~~~~~g~~l~~~L~-~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~ 420 (464)
T TIGR00699 353 SRALILREIIQEIKRK-----------DLLENVAHVGDYLYTGLE-DLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDK 420 (464)
T ss_pred HHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHHHH-HHHHhCCCceeeecccCeEEEEEEecCCHHHHHH
Confidence 3333333 333332 233445555555555555 4421011 11121 02344433333 2 22
Q ss_pred HHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHh
Q 015283 367 QSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 367 ~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
+...+++ .|+++.+.| ||..+. +++++++.++++|.+++
T Consensus 421 i~~~~~~-~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 421 LLKKARN-NGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHHH-CCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 3455555 599998765 776443 59999999999998874
No 345
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=1.8e-13 Score=124.59 Aligned_cols=330 Identities=13% Similarity=0.056 Sum_probs=197.0
Q ss_pred CeeeeeeeeeecCCC-cccccHHHHHHHHHhhcc-C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 35 KKLNLGVGAYRTEEL-QPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~-~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
..+||++=.|+.-.. ..+..+.+.+++...--+ . ..+.-+...-+.++.+.+|+++ +. ++.++| +-|
T Consensus 137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~-g~------e~a~vF---~mG 206 (519)
T KOG1357|consen 137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFL-GV------EDAIVF---SMG 206 (519)
T ss_pred eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhc-CC------cceEEE---ecc
Confidence 568888765543221 123457777777765422 1 1111112233456777777774 32 566777 444
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC----C------CCc
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----P------GGS 181 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~------~~~ 181 (410)
-+++.+. +-..+.||.-|+-.+..+.+.+.-++..|+.++-+.++ |..+||+.+++. + -+.
T Consensus 207 f~TNs~~--~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kk 277 (519)
T KOG1357|consen 207 FATNSMN--IPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKK 277 (519)
T ss_pred ccccccC--cceeecCCcceeeccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchh
Confidence 4444443 23346798888888889999998889999998888873 556666665541 1 123
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH--hhcCCcEEEEecccccccc
Q 015283 182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~~~~ 259 (410)
.+++......--|. ..++.+++.++++|..+++.||+++.-..+. ..-++-.+ .+..+.+|.+++|+|++|.
T Consensus 278 i~iivegiysmEg~---iv~Lp~vvalkkkykayl~lDEAHSiGA~g~---tGrgvce~~g~d~~dvDImMGtftKSfga 351 (519)
T KOG1357|consen 278 ILICVEGIYSMEGT---IVDLPEVVALKKKYKAYLYLDEAHSIGAMGA---TGRGVCEYFGVDPEDVDIMMGTFTKSFGA 351 (519)
T ss_pred eeeeeccceeccCe---ecccHHHHHhhccccEEEEeeccccccccCC---CCcceeeccCCCchhheeecceehhhccc
Confidence 34443333333344 6778899999999999999999977554321 11122222 2234578999999999998
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH--HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
.| ||+ .+++++++.++..-..... ..+.++.++|+.. ...+..... .+.-++..+++++++.+++..
T Consensus 352 ~G---Gyi---agsk~lid~lrt~s~~~~y-at~~sppvaqq~~ssl~~i~G~dg----t~~g~~k~~~l~~ns~yfr~~ 420 (519)
T KOG1357|consen 352 AG---GYI---AGSKELIDYLRTPSPSALY-ATSLSPPVAQQILTSVKHIMGEDG----TNRGRQKIERLAENSRYFRWE 420 (519)
T ss_pred cc---cee---cCcHHHHhhhccCCCceee-cccCChHHHHHHHHHHHhhcCCCc----ccHHHHHHHHHHhhhHHHHHh
Confidence 77 885 4488844443322111111 1234555555554 333332221 233467778899999999999
Q ss_pred hhhccCCCCCcccccCCccee----eec-CCCHHHHHHhhhcCcEEEcCCC-----------eEEecC-CCcccHHHHHH
Q 015283 338 LSAKDKSGKDWSFILRQIGMF----SFT-GLNKAQSDNMTNKWHVYMTKDG-----------RISLAG-LSLAKCEYLAD 400 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~----~~~-~~~~~~~~~ll~~~gi~v~~~g-----------Ris~~~-~~~~~i~~~~~ 400 (410)
++ ..|+ .+.....+.. ++. .....+-++++++ ++.++..| |++.+. .+.|+++++++
T Consensus 421 l~-~~gf----ivyG~~dSpVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~ 494 (519)
T KOG1357|consen 421 LQ-KMGF----IVYGNNDSPVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALE 494 (519)
T ss_pred hh-cCcE----EEecCCCCCcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHH
Confidence 98 8873 3333333321 111 1234556677774 55554332 787664 58899999999
Q ss_pred HHHHHh
Q 015283 401 AIIDSY 406 (410)
Q Consensus 401 ~l~~~l 406 (410)
.+.++-
T Consensus 495 ~i~~~g 500 (519)
T KOG1357|consen 495 VIDRVG 500 (519)
T ss_pred HHhhhc
Confidence 887763
No 346
>PLN02590 probable tyrosine decarboxylase
Probab=99.52 E-value=2.2e-11 Score=119.09 Aligned_cols=333 Identities=11% Similarity=0.022 Sum_probs=197.2
Q ss_pred HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCccc-----CCceEEEecCChhhHHHHHHHHHHHh--C-
Q 015283 55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIERY--F- 126 (410)
Q Consensus 55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~-----~~~i~~~~t~ggt~a~~~~~~~~~~~--~- 126 (410)
..+-+.+...++... ..|.......++.+.+.+|+.+..+.+-. ...-.+ ++|||+|+..+....+.. .
T Consensus 145 ~~lgd~l~sa~n~~~-~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~al~aAR~~~~~~ 221 (539)
T PLN02590 145 GFLGEMLNAGLSVVG-FTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVVVLAARDRILKK 221 (539)
T ss_pred HHHHHHHHHhccccc-CCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHHHHHHHHHHHhh
Confidence 344455555554332 45555667789999999998887776421 022455 899999987764333331 0
Q ss_pred ------CCCEEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCC
Q 015283 127 ------PGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTG 194 (410)
Q Consensus 127 ------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG 194 (410)
+.-.|++++-++.+..+.+..+|. +++.||+...+++.+|++.|++.|.+. +..+.+++-+.....||
T Consensus 222 ~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tG 301 (539)
T PLN02590 222 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSA 301 (539)
T ss_pred hcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCc
Confidence 111455577788889999998887 578888743356889999999998652 23456666566677788
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
. .+++++|+++|++||+|+.+|.||.++... .+ ..+.+.. ...-+-+..+.+|.+..| .-.|.+ .+++
T Consensus 302 a---iDpl~~Ia~i~~~~g~WlHVDaA~GG~al~--~~---~~r~~~~Gie~ADSit~D~HK~l~~p-~~cg~l--lvr~ 370 (539)
T PLN02590 302 A---VDPLVPLGNIAKKYGIWLHVDAAYAGNACI--CP---EYRKFIDGIENADSFNMNAHKWLFAN-QTCSPL--WVKD 370 (539)
T ss_pred c---cCCHHHHHHHHHHhCCeEEEecchhhhhhc--Ch---hhHHHhcCCccCCEEEECchhhcCcC-cCEEEE--EecC
Confidence 8 788899999999999999999999987632 11 1222222 122345566899988644 666776 4444
Q ss_pred chh-HHHHH---HHHHhhc--------cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283 274 SDL-AARVK---SQLKRLA--------RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 341 (410)
Q Consensus 274 ~~~-~~~~~---~~~~~~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 341 (410)
+.. .+.+. .++.... ...|.-..+....++..++. ++..-.+.++++.++.-+..+++.+.++ +
T Consensus 371 ~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~---lr~~G~~G~~~~i~~~~~lA~~~~~~l~-~ 446 (539)
T PLN02590 371 RYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMV---LRLYGSENLRNFIRDHVNLAKHFEDYVA-Q 446 (539)
T ss_pred HHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 432 12221 1111000 00111111111122221111 1111134566777777888888888887 6
Q ss_pred cCCCCCcccc-cCCcceeee--cC--CC--------HHHHHHhhhcCcEEEcCC---C----eEEecC--CCcccHHHHH
Q 015283 342 DKSGKDWSFI-LRQIGMFSF--TG--LN--------KAQSDNMTNKWHVYMTKD---G----RISLAG--LSLAKCEYLA 399 (410)
Q Consensus 342 ~g~~~~~~~~-~~~~~~~~~--~~--~~--------~~~~~~ll~~~gi~v~~~---g----Ris~~~--~~~~~i~~~~ 399 (410)
.+- +++. ++.-+...| .+ .+ ..+.+++.+...+++.+. | |+++.+ .++++++.++
T Consensus 447 ~~~---fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~ 523 (539)
T PLN02590 447 DPS---FEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAW 523 (539)
T ss_pred CCC---eEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHH
Confidence 541 4433 333333322 22 11 233445555444555543 3 998775 2788999999
Q ss_pred HHHHHHhhh
Q 015283 400 DAIIDSYHN 408 (410)
Q Consensus 400 ~~l~~~l~~ 408 (410)
+.|.+...+
T Consensus 524 ~~i~~~a~~ 532 (539)
T PLN02590 524 QIIQKHASK 532 (539)
T ss_pred HHHHHHHHH
Confidence 999887654
No 347
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.52 E-value=2.7e-12 Score=123.93 Aligned_cols=334 Identities=11% Similarity=0.048 Sum_probs=171.6
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHH--HHHHHhhccCC--CccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVK--KAENLMLERGE--NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~--~a~~~~~~~~~--~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
+...||+..|..-...|+. .|.+. +++.+++.... ...+ ....-..++.+.+++..... ..+.+.+
T Consensus 37 G~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~~v~f- 108 (431)
T TIGR03251 37 GRRYLDMFSFFASMALGMN--HPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDP-----ALPHLFF- 108 (431)
T ss_pred CCChhhcccChhhcCCCCC--ChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCC-----CcCEEEE-
Confidence 4567888877653455655 47777 77777664321 0111 11112223333334432111 1367888
Q ss_pred ecCChhhHHHHHHHHHHHhC------C------CCEEEEcCCCCcchhhh-hhhCCCC-cc----------c--eeee--
Q 015283 107 QGLSGTGSLRLAAALIERYF------P------GAKVLISSPTWGNHKNI-FNDARVP-WS----------E--YRYY-- 158 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~------~------gd~Vl~~~p~y~~~~~~-~~~~g~~-~~----------~--v~~~-- 158 (410)
+++|++|++.+.++.+.+. . +.+|+...-+|.+.... +...|.. .. . .|..
T Consensus 109 -~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~ 187 (431)
T TIGR03251 109 -IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTF 187 (431)
T ss_pred -eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccC
Confidence 9999999999998887653 1 36799888877655322 2222211 00 0 1100
Q ss_pred c--CCCc-------ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 159 D--PKTV-------GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 159 ~--~~~~-------~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
+ .+.. .-+++.+++.+...+++...+++...+.-.|... +++.+++|.++|++||+++|+||++.+|+..
T Consensus 188 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Grt 267 (431)
T TIGR03251 188 PLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLT 267 (431)
T ss_pred CccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCcc
Confidence 0 0000 0134455566655445667777666677778764 5666999999999999999999999988743
Q ss_pred CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH--hhccCcccCCChhHHHHHH--
Q 015283 229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK--RLARPMYSNPPVHGARIVA-- 304 (410)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~-- 304 (410)
...+....+ +..++++ .++|.+ +. .|++ . .+++.+.....+. .....+++ .+.++..++.
T Consensus 268 ---G~~~a~~~~-gv~PDi~---~~gK~~--~~--~g~~---~-~~~i~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~ 331 (431)
T TIGR03251 268 ---GTAWAYQQL-GVQPDIV---AFGKKT--QV--CGIM---A-GRRVDEVADNVFAVPSRLNSTWG-GNLVDMVRATRI 331 (431)
T ss_pred ---chHHHHHhc-CCCCCEE---EecccC--cc--ceEE---e-cchHHHhhhhcccCccccCCCCC-CCHHHHHHHHHH
Confidence 223332222 2233444 478876 21 2443 2 2221111110111 11222332 3333333333
Q ss_pred -HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC--cccccCCcceeeecCC-C----HHHHHHhhhcCc
Q 015283 305 -NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD--WSFILRQIGMFSFTGL-N----KAQSDNMTNKWH 376 (410)
Q Consensus 305 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~~~~~~~~~~~~~-~----~~~~~~ll~~~g 376 (410)
..+.+.+ ..++.+++.+++.+.|+ ++..... +...... |.+..+.+ + ..+..++++ +|
T Consensus 332 L~~l~~~~-----------l~~~~~~~g~~l~~~L~-~l~~~~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~-~G 397 (431)
T TIGR03251 332 LEIIEEER-----------LVDNARVQGAHLLARLH-ELAAEFPHLVSNPRGR-GLMCAFDLPSTADRDEVIRQLYR-EG 397 (431)
T ss_pred HHHHHhcC-----------HHHHHHHHHHHHHHHHH-HHHHhCccceeccccc-ceeEEEEeCCHHHHHHHHHHHHh-CC
Confidence 3332222 22233334444444443 3210000 1112222 44433333 1 234555654 69
Q ss_pred EEEcCCC----eEEecC-CCcccHHHHHHHHHHH
Q 015283 377 VYMTKDG----RISLAG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 377 i~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~ 405 (410)
|++.+.+ ||+.+. .+++++++++++|.++
T Consensus 398 vl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 398 VLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred eEEecCCCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 9998765 776443 4899999999999864
No 348
>PLN02880 tyrosine decarboxylase
Probab=99.51 E-value=8.5e-12 Score=121.78 Aligned_cols=330 Identities=9% Similarity=0.036 Sum_probs=190.7
Q ss_pred HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCccc-----CCceEEEecCChhhHHHHHHHHHHHh--C-
Q 015283 55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIERY--F- 126 (410)
Q Consensus 55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~-----~~~i~~~~t~ggt~a~~~~~~~~~~~--~- 126 (410)
..+.+.+...++... ..|.......++.+.+.+|+.+..|.+-. ...-.+ |+|||+++..+..+.+.. .
T Consensus 97 ~~lad~l~~~~n~~~-~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~al~~AR~~~~~~ 173 (490)
T PLN02880 97 GFLGEMLSAGLNIVG-FSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVVLLAARDRVLRK 173 (490)
T ss_pred HHHHHHHHHhhccCC-cccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHHHHHHHHHHHHH
Confidence 344444555444322 44544456778999999998877765421 012455 899999987764444321 1
Q ss_pred C-----CC-EEEEcCCCCcchhhhhhhCCCC---ccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCCC
Q 015283 127 P-----GA-KVLISSPTWGNHKNIFNDARVP---WSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTG 194 (410)
Q Consensus 127 ~-----gd-~Vl~~~p~y~~~~~~~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPtG 194 (410)
. .. .|++++-++.+..+.+...|.. ++.||+.+.+++.+|++.|++.+.+ .+..+.+++-+....+||
T Consensus 174 ~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~G 253 (490)
T PLN02880 174 VGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSST 253 (490)
T ss_pred hcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCc
Confidence 1 12 4556777888999999999984 6778874345678999999998864 233456666666788889
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
. .+++++|+++|++||+++.+|.+|.++... .+ ..+..... ...+.+..+++|.++. ....|.+.+ ++
T Consensus 254 a---iDpl~eI~~i~~~~~iwlHVDaA~gg~~~~---~~--~~~~~l~gie~aDSit~d~HKwl~~-P~~~g~llv--r~ 322 (490)
T PLN02880 254 A---VDPLLELGKIAKSNGMWFHVDAAYAGSACI---CP--EYRHYIDGVEEADSFNMNAHKWFLT-NFDCSLLWV--KD 322 (490)
T ss_pred c---cCcHHHHHHHHHHcCCEEEEehhhHHHHHh---CH--HHHHHhcCchhcCEEEECchhhcCC-CccEEEEEE--eC
Confidence 8 556778888899999999999998876532 11 12222221 2346777899999864 476787744 33
Q ss_pred chh-HHHHHHHHHhhccC------------cccCCChhHHHHHHH--HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283 274 SDL-AARVKSQLKRLARP------------MYSNPPVHGARIVAN--VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 338 (410)
Q Consensus 274 ~~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 338 (410)
... .+.+.... .+... .+.-....-..++.. .|+... .+.++++.++.-+.++++.+.+
T Consensus 323 ~~~l~~~~~~~~-~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G-----~~g~~~~i~~~~~lA~~~~~~l 396 (490)
T PLN02880 323 RNALIQSLSTNP-EFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYG-----VENLQSYIRNHIKLAKEFEQLV 396 (490)
T ss_pred HHHHHHHHccCH-HHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 321 11111100 01000 000000000011111 111111 2233444555557888888888
Q ss_pred hhccCCCCCccccc-CCcceeee--cCC--C--------HHHHHHhhhcCcEEEcCC---C----eEEecCC--CcccHH
Q 015283 339 SAKDKSGKDWSFIL-RQIGMFSF--TGL--N--------KAQSDNMTNKWHVYMTKD---G----RISLAGL--SLAKCE 396 (410)
Q Consensus 339 ~~~~g~~~~~~~~~-~~~~~~~~--~~~--~--------~~~~~~ll~~~gi~v~~~---g----Ris~~~~--~~~~i~ 396 (410)
+ +... +++.. +..+...| .+. + ..+.+++.++..+++.+. | |+++.+. ++++++
T Consensus 397 ~-~~~~---~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~ 472 (490)
T PLN02880 397 A-QDSR---FEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVT 472 (490)
T ss_pred h-cCCC---EEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHH
Confidence 7 5531 34333 33333322 221 1 234456655566666543 2 9987652 568999
Q ss_pred HHHHHHHHHhhh
Q 015283 397 YLADAIIDSYHN 408 (410)
Q Consensus 397 ~~~~~l~~~l~~ 408 (410)
.+++.|.++.++
T Consensus 473 ~~~~~i~~~~~~ 484 (490)
T PLN02880 473 AAWKVLQDEASK 484 (490)
T ss_pred HHHHHHHHHHHH
Confidence 999999887654
No 349
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.49 E-value=1.6e-11 Score=109.82 Aligned_cols=165 Identities=19% Similarity=0.117 Sum_probs=125.7
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh----hhhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~ 150 (410)
..+....+.+.|+.+-.+ +..+.+++|+.|+..+ +++...+||.|+-.+--|++.. ..++..|.
T Consensus 60 ~NPT~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~a--i~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi 127 (426)
T COG2873 60 MNPTTDVLEERIAALEGG----------VAALAVASGQAAITYA--ILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGI 127 (426)
T ss_pred cCchHHHHHHHHHHhhcc----------hhhhhhccchHHHHHH--HHHhccCCCeeEeeccccCchHHHHHHHHHhcCc
Confidence 345677899999998322 2223369999999988 6777889999999987776654 45567888
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++- .|++.+++.+++ ++++++.-+..||-+.++ |+++|+++|+++|+++|+|..+..-..
T Consensus 128 ~v~fvd~-------~d~~~~~~aI~~---nTkavf~EtigNP~~~v~---Die~ia~iAh~~gvpliVDNT~atpyl--- 191 (426)
T COG2873 128 EVRFVDP-------DDPENFEAAIDE---NTKAVFAETIGNPGLDVL---DIEAIAEIAHRHGVPLIVDNTFATPYL--- 191 (426)
T ss_pred EEEEeCC-------CCHHHHHHHhCc---ccceEEEEeccCCCcccc---CHHHHHHHHHHcCCcEEEecCCCccee---
Confidence 8888864 378999999986 888999899999999965 566888889999999999999654221
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 275 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~ 275 (410)
++++ +..-.|++.|.||.+|-.|--+|.+++-.++-+
T Consensus 192 ------~rP~--~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FD 228 (426)
T COG2873 192 ------CRPI--EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFD 228 (426)
T ss_pred ------cchh--hcCCCEEEEeecccccCCccccceEEEeCCccc
Confidence 1111 234678899999999988988999876444444
No 350
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.47 E-value=9e-12 Score=119.69 Aligned_cols=274 Identities=13% Similarity=0.024 Sum_probs=175.6
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hC-
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YF- 126 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~- 126 (410)
+++.+++...+++...+..+. ....-..+..++.+.+..++....+.+. .---.+ |+|||+++.++..+.+. +.
T Consensus 70 ~~~~~~~~a~~~~~~~~~~nl-~d~~~~p~a~~~E~~~v~~l~~l~~~~~-~~~G~~--t~GgTean~lal~aar~~~~~ 145 (460)
T COG0076 70 CPTRVPPVAAELLVSALNKNL-GDPDESPAAAELEERVVNMLSDLLGAPE-EASGTF--TSGGTEANLLALLAARERWRK 145 (460)
T ss_pred CCCCCHHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCCCC-CCceEE--EcChHHHHHHHHHHHHHHHHH
Confidence 445556777787777765533 2121223677888888888877776642 222345 89999999987555543 21
Q ss_pred -C---CC------EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE--EEeCCCCCCCC
Q 015283 127 -P---GA------KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI--LLHGCAHNPTG 194 (410)
Q Consensus 127 -~---gd------~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~--ii~~~p~NPtG 194 (410)
. +. .|+++.-.+.++.+.++..|...+.+++.+. +..+|++++++++.+ .+.. ++.+.+..+||
T Consensus 146 ~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~---~t~~g~vV~~aGtT~~G 221 (460)
T COG0076 146 RALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDE---NTIGGVVVGTAGTTDTG 221 (460)
T ss_pred HhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHh---hccCceEEEEecCCCCC
Confidence 1 11 6999999999999999999999999998544 788999999999987 3332 55566888999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
. .+++++|.++|+++++++.+|.||.++...-.+.+.. .......-+-+..+++|... .-...||+ +.+++
T Consensus 222 ~---iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~---~~f~l~~vdSIt~d~HK~g~-aP~~~G~i--l~rd~ 292 (460)
T COG0076 222 S---IDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR---WDFGLEGVDSITVDGHKYGL-APIGCGVV--LFRDE 292 (460)
T ss_pred c---cCCHHHHHHHHHHcCCcEEEEccccceeecccCccch---hhcCCCCceEEEECcccccC-CCCCceEE--EEECH
Confidence 9 8889999999999999999999999887421111111 01112224455668999764 44778998 45666
Q ss_pred hhHHHHHHHHHhhcc-----CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 275 DLAARVKSQLKRLAR-----PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 275 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
+...+.......+.. +.....+..+..++..+. .+.....+.++++.++..+..+++.+.|. +.|
T Consensus 293 e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~---~l~~lG~eGy~~l~~~~~~~a~~la~~l~-~~~ 362 (460)
T COG0076 293 EALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYA---NLRRLGREGYRKLLDRTLELARYLAEELE-KLG 362 (460)
T ss_pred HHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHH---HHHHhCHhHHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 433332221111111 111122222212221111 11111235567888888899999999998 776
No 351
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.46 E-value=1.4e-11 Score=115.61 Aligned_cols=304 Identities=14% Similarity=0.038 Sum_probs=179.2
Q ss_pred cHH-HHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCc--eEEEecCChhhHHHHHHHHHHHhC-C
Q 015283 54 LDV-VKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQR--VATVQGLSGTGSLRLAAALIERYF-P 127 (410)
Q Consensus 54 ~~~-v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~--i~~~~t~ggt~a~~~~~~~~~~~~-~ 127 (410)
-|. ..+++.+.+-. ..++.+ ..-..+.++.+.+.+... .+. +++ +.+||++.+.+ +.+.+. +
T Consensus 15 ~~~~~~~~~~~~~~~--~~HRs~~F~~i~~e~~~~L~~l~~~~------~~~~v~~l--~GsGT~a~Eaa--~~nl~~~~ 82 (374)
T TIGR01365 15 RPGWSIEELKNAPLG--RSHRSKLGKEKLAEAIKKTREMLGVP------ADYLIGIV--PASDTGAVEMA--LWSMLGCR 82 (374)
T ss_pred CchhhHHHHhhhhcc--cCcCCHHHHHHHHHHHHHHHHHhCCC------CCcEEEEE--CCchHHHHHHH--HHHcCCCC
Confidence 344 55666654433 122322 112334455555554321 233 344 89999999998 666674 8
Q ss_pred CCEEEEcCCCCcch-h-hhhhhCCC-CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283 128 GAKVLISSPTWGNH-K-NIFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 204 (410)
Q Consensus 128 gd~Vl~~~p~y~~~-~-~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~ 204 (410)
||+|++.. .|+.. . ++++.+|. ++..+.. +.+..+|+++++. + +.+ .+++....||+..+. ++
T Consensus 83 g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~---~---~~v--~~vhnETSTGv~npv---~~ 148 (374)
T TIGR01365 83 GVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF---K---NDV--VFTWNGTTSGVRVPN---GD 148 (374)
T ss_pred CCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC---C---CCE--EEecCCCchheeccc---cc
Confidence 89999875 55543 4 78888998 4777754 5666788888862 1 222 345667778996665 34
Q ss_pred HHHHHHH-cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH-
Q 015283 205 IADVIQE-KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS- 282 (410)
Q Consensus 205 i~~~~~~-~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~- 282 (410)
++ ++ ++.++|+|.+ +.++..+.+.+ .-++++.|.-|.+++|+ +++++++ +++.+++...
T Consensus 149 i~---~~~~~~lliVDav-Ss~g~~~l~~d-----------~iDv~~tgsQK~L~~pp-Gls~v~v---s~~Al~~~~~~ 209 (374)
T TIGR01365 149 FI---PADREGLTICDAT-SAAFAQDLDYH-----------KLDVVTFSWQKVLGGEG-AHGMLIL---SPRAVARLESY 209 (374)
T ss_pred cc---cccCCCcEEEEcc-chhcCCCCChh-----------HCcEEEEechhccCCCC-ceEEEEE---CHHHHHHHhhc
Confidence 43 33 5899999999 77775432211 14566777788886653 1355544 7777666542
Q ss_pred --------HHH---------hhc-cCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 283 --------QLK---------RLA-RPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 283 --------~~~---------~~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.+. ... ..+..+|+..+..++...|+.- .++ .++...++.+++++.+++.++ ++|
T Consensus 210 ~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i-----~~egGle~~~~Rh~~~a~~l~~~l~-~lg 283 (374)
T TIGR01365 210 TPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWA-----ESIGGLKPLIARADDNLAVLEAFVA-KNN 283 (374)
T ss_pred CCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHH-----HHccCHHHHHHHHHHHHHHHHHHHH-HCC
Confidence 111 001 1222244444444444433210 011 367888999999999999999 998
Q ss_pred CCCCcccccCCcce----eeec-C-C-----C-----HHHHHHhhhcCcEEEcCCC--------eEE-ecCCCcccHHHH
Q 015283 344 SGKDWSFILRQIGM----FSFT-G-L-----N-----KAQSDNMTNKWHVYMTKDG--------RIS-LAGLSLAKCEYL 398 (410)
Q Consensus 344 ~~~~~~~~~~~~~~----~~~~-~-~-----~-----~~~~~~ll~~~gi~v~~~g--------Ris-~~~~~~~~i~~~ 398 (410)
....+...+...+. +... + + + .+.+.+.++++||.+.+|. ||+ ++.++.++++.+
T Consensus 284 ~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l 363 (374)
T TIGR01365 284 WIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECL 363 (374)
T ss_pred CcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHH
Confidence 31111110111111 2221 2 2 1 3456666667799998763 996 666899999999
Q ss_pred HHHHHHHhhh
Q 015283 399 ADAIIDSYHN 408 (410)
Q Consensus 399 ~~~l~~~l~~ 408 (410)
++.|.-+.+.
T Consensus 364 ~~~l~~~~~~ 373 (374)
T TIGR01365 364 CPWLDWAFAL 373 (374)
T ss_pred HHHHHHHHhc
Confidence 9999877643
No 352
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.46 E-value=3e-11 Score=112.76 Aligned_cols=333 Identities=12% Similarity=0.066 Sum_probs=193.9
Q ss_pred eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
.|||-+-. ++..+++...+++.. + +..|.....+.+|.+.+++.+.. +.+++ |..|+++.
T Consensus 43 ~IDLrSDT-----gT~apS~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~G~--------E~alp--thqGRgaE 102 (467)
T TIGR02617 43 FIDLLTDS-----GTGAVTQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIFGY--------QYTIP--THQGRGAE 102 (467)
T ss_pred EEECccCC-----CCCCCCHHHHHHHHc----C-CcccccCchHHHHHHHHHHHhCC--------ceEEE--CCCCchHH
Confidence 46666322 332236777777765 2 36688888888999999999633 45666 88999988
Q ss_pred HHHHHHHHHhC-CCCEEEEcCC--------CCcchhhhhhhCCCCccceeee--------cCCCcccChhhHHHHHhcCC
Q 015283 116 RLAAALIERYF-PGAKVLISSP--------TWGNHKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 116 ~~~~~~~~~~~-~gd~Vl~~~p--------~y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~~~l~~~i~~~~ 178 (410)
.++..+ .+. +||.+++..+ .|..........|+.++.++.. ....+.+|++++++.+++.+
T Consensus 103 ~Il~~~--~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g 180 (467)
T TIGR02617 103 QIYIPV--LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVG 180 (467)
T ss_pred HHHHHh--hcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcC
Confidence 887433 366 7887775443 1222233556778777665431 12346789999999998642
Q ss_pred C-CcEEEEeCCCCCC-CCCCCCHHHHHHHHHHHHHcCCcccccccCCCC-CC--CCC--CCchhHhHHHhhc--CCcEEE
Q 015283 179 G-GSFILLHGCAHNP-TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF-AS--GSL--DNDASSVRLFATR--GMELLV 249 (410)
Q Consensus 179 ~-~~~~ii~~~p~NP-tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~-~~--~~~--~~~~~~~~~~~~~--~~~~i~ 249 (410)
. +...+...-.+|. -|+++|.+.++++.++|++||+.++.|.+-..- .+ ... .....++..+..+ ...+.+
T Consensus 181 ~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsv 260 (467)
T TIGR02617 181 PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADML 260 (467)
T ss_pred CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEE
Confidence 1 2222221112344 478999999999999999999999999984221 11 000 0111233333211 224566
Q ss_pred EecccccccccCCCcceEEEEeCCc---hhHHHHHHHHHhhc-cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSS---DLAARVKSQLKRLA-RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
..|+||.++.| +|.++ ..+++ ++.++++...-..- +.++.+.+.....+++.-|.+. .. .+ ..+.
T Consensus 261 t~slsKglgAp---vGg~L-ag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~-~~---~~---yl~~ 329 (467)
T TIGR02617 261 AMSAKKDAMVP---MGGLL-CFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG-MN---LD---WLAY 329 (467)
T ss_pred EEEcCCCCCCc---ccceE-EecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhc-cc---HH---HHHH
Confidence 67999998755 56553 23444 33333333221111 2244455555555555444432 11 11 1222
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-------C------CHHHHHHhhhcCcEEEcCC----------
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------L------NKAQSDNMTNKWHVYMTKD---------- 382 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-------~------~~~~~~~ll~~~gi~v~~~---------- 382 (410)
++ ...++|.+.|. +.|+ .+.. .+|.-+|++ + ...++.+|..+.||-..--
T Consensus 330 ri-~qv~yl~~~L~-~~Gv----pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~ 402 (467)
T TIGR02617 330 RI-NQVQYLVNGLE-EIGV----VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPK 402 (467)
T ss_pred HH-HHHHHHHHHHH-hCCC----cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCC
Confidence 22 24456777887 7874 3344 455545552 1 1345667777777754221
Q ss_pred -C----------eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283 383 -G----------RISLAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 383 -g----------Ris~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
| |++++. .|.+.++.++++++.+.++
T Consensus 403 ~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 403 TGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred CCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1 888764 4889999999999988764
No 353
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.41 E-value=7.5e-11 Score=117.45 Aligned_cols=213 Identities=11% Similarity=0.028 Sum_probs=126.3
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccc
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 154 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 154 (410)
+..-..+..+.+|+.+... .-..+ ++|+|+++.++ +.+.+.+||.|++..-||-+....+...|+.+++
T Consensus 193 ~~G~i~eAe~~aA~~fgAd-------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVY 261 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAE-------QSYIV--TNGTSTSNKIV--GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIW 261 (713)
T ss_pred CChHHHHHHHHHHHHhCCC-------cEEEE--eCChHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEE
Confidence 3333456666666664332 22333 68889998888 5667889999999999999988889999999998
Q ss_pred eeeecCCCc----ccCh-----hhHHHHHhcCCCC--cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-cccccC
Q 015283 155 YRYYDPKTV----GLDF-----EGMIADIKAAPGG--SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP-FFDVAY 222 (410)
Q Consensus 155 v~~~~~~~~----~~d~-----~~l~~~i~~~~~~--~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l-i~Deay 222 (410)
++.. .+.+ +++. +.+++.+.++++. ++.+++++| +-.|.+++.+.+.++ | |+.+ ++||||
T Consensus 262 l~P~-~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~---~---g~~~ilvDEAh 333 (713)
T PRK15399 262 LKPT-RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQT---L---DVPSIHFDSAW 333 (713)
T ss_pred eccc-ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHH---h---CCCEEEEeccc
Confidence 8532 1222 3444 8888888876432 133443333 445998776655444 5 5656 699998
Q ss_pred CCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHH
Q 015283 223 QGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGAR 301 (410)
Q Consensus 223 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
.+.. |.+.-++...+.........++++.|.+|.+ +|+.-+.++.+.+ .-..+++...+..+..+..+.+...+..
T Consensus 334 gah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~-~vd~~~~n~a~~m~~STSPsY~LmASLD 410 (713)
T PRK15399 334 VPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKG-EYDEETFNEAFMMHTSTSPSYPIVASVE 410 (713)
T ss_pred hhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecC-CCCHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 7643 3211111222210001223456699999996 5777777655433 2234567776664443222233333444
Q ss_pred HHHHHhCC
Q 015283 302 IVANVVGN 309 (410)
Q Consensus 302 ~a~~~l~~ 309 (410)
.+..++..
T Consensus 411 ~a~~~m~~ 418 (713)
T PRK15399 411 TAAAMLRG 418 (713)
T ss_pred HHHHHHHh
Confidence 45555553
No 354
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.41 E-value=1.1e-11 Score=123.28 Aligned_cols=213 Identities=12% Similarity=0.062 Sum_probs=127.5
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccc
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 154 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 154 (410)
|..-..+..+.+|+.+... .. ..+ ++|+|+++.++ +.+.+.+||.|++..-||-+....+...|+.+++
T Consensus 193 ~~G~i~eAe~~AA~~fgAd------~t-yfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNAD------RS-YMV--TNGTSTANKIV--GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred CChHHHHHHHHHHHHhCCC------cE-EEE--eCchHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 3333456666666664322 12 333 68888998887 5666889999999999999988889999999998
Q ss_pred eeeecCCCc----ccC-----hhhHHHHHhcCCCCc---EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC
Q 015283 155 YRYYDPKTV----GLD-----FEGMIADIKAAPGGS---FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 222 (410)
Q Consensus 155 v~~~~~~~~----~~d-----~~~l~~~i~~~~~~~---~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay 222 (410)
++.. .+.+ .++ .+.+++.+.++++.. .+++ .+| +-.|.+++.+ .|++.|+.++ |++||||
T Consensus 262 l~P~-rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vi-t~p-TYdG~~yd~~---~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 262 FRPT-RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVI-TNS-TYDGLLYNTD---FIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred eccc-ccccCCccCCCccccCHHHHHHHHHhCccccCccEEEE-ECC-CCccEecCHH---HHHHHhCCCC--EEEEccc
Confidence 8542 1222 334 788998888764322 3444 333 4459977654 5566677776 6899998
Q ss_pred CCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHH
Q 015283 223 QGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGAR 301 (410)
Q Consensus 223 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
.+.. |.+.-++..++.......+.++++.|.+|.+ +|+.-+.++.+.+ .-..+++...+..+..+..+.+...+..
T Consensus 334 gah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg-~vd~~~~n~a~~m~~STSPsY~l~ASLD 410 (714)
T PRK15400 334 VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKG-DVNEETFNEAYMMHTTTSPHYGIVASTE 410 (714)
T ss_pred hhhhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcC-CCCHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 7653 3211111222211111224569999999997 4666555543322 2223566666664443222233333444
Q ss_pred HHHHHhCC
Q 015283 302 IVANVVGN 309 (410)
Q Consensus 302 ~a~~~l~~ 309 (410)
++..++..
T Consensus 411 ~a~~~m~~ 418 (714)
T PRK15400 411 TAAAMMKG 418 (714)
T ss_pred HHHHHHHh
Confidence 45566653
No 355
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.38 E-value=5.2e-11 Score=118.71 Aligned_cols=213 Identities=14% Similarity=0.059 Sum_probs=124.8
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCCCcc
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS 153 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~ 153 (410)
+..-..+..+.+|+.|... .. ..+ ++|+|.++.++ +.+.+.+||.|++..-||-+.... +...|+.++
T Consensus 172 ~eG~i~eAq~~AA~~fgAd------~t-yFl--vNGTS~gn~a~--i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PV 240 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNAD------KT-YFV--LNGTSASNKVV--TNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV 240 (720)
T ss_pred CChHHHHHHHHHHHHhCCC------ce-EEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEE
Confidence 3333456666666664332 22 333 68889999888 666788999999999999988774 888999998
Q ss_pred ceeeecCCCc----ccCh-----hhHHHHHhcCCCC-------cEEEEeCCCCCCC--CCCCCHHHHHHHHHH-HHHcCC
Q 015283 154 EYRYYDPKTV----GLDF-----EGMIADIKAAPGG-------SFILLHGCAHNPT--GIDPTPEQWEKIADV-IQEKNH 214 (410)
Q Consensus 154 ~v~~~~~~~~----~~d~-----~~l~~~i~~~~~~-------~~~ii~~~p~NPt--G~~~~~~~l~~i~~~-~~~~~~ 214 (410)
+++..- +.+ +++. +.+++.+.++++. .+++++ .||| |.+++. ++|+++ |+.++
T Consensus 241 Yl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvi---t~pTYdG~~ydi---~~I~~~~~h~~~- 312 (720)
T PRK13578 241 YLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVI---QLGTYDGTIYNA---RQVVDKIGHLCD- 312 (720)
T ss_pred Eeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEE---ECCCCcceeecH---HHHHHHhhccCC-
Confidence 885421 222 3454 4488888765211 244443 2555 997665 556565 67777
Q ss_pred cccccccCCCCC-CCCCCCchhHhH-HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh--------HHHHHHHH
Q 015283 215 IPFFDVAYQGFA-SGSLDNDASSVR-LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL--------AARVKSQL 284 (410)
Q Consensus 215 ~li~Deay~~~~-~~~~~~~~~~~~-~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~--------~~~~~~~~ 284 (410)
.|++||||.+.. |.+.-.+.+... .+....+.++++.|.+|.+ +++.-+.++.+ ++..+ .+++...+
T Consensus 313 ~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHv-k~~~i~g~~~~v~~~r~~~al 389 (720)
T PRK13578 313 YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHK-KDNHIKGQARYCPHKRLNNAF 389 (720)
T ss_pred cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhc-CCcccccccccCCHHHHHHHH
Confidence 999999986643 321100111111 1112234579999999997 46666665432 33221 25677766
Q ss_pred HhhccCcccCCChhHHHHHHHHhCC
Q 015283 285 KRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
..+..+..+.+...+..++..++..
T Consensus 390 ~m~qSTSPsY~LmASLDva~~~m~~ 414 (720)
T PRK13578 390 MLHASTSPFYPLFAALDVNAKMHEG 414 (720)
T ss_pred HHHcCCChHHHHHHHHHHHHHHHHH
Confidence 6444322222223333444455543
No 356
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.38 E-value=3.9e-10 Score=115.29 Aligned_cols=220 Identities=14% Similarity=0.114 Sum_probs=118.7
Q ss_pred hhHHHHHhc-----CCCCcEEEEeCC-CCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 168 EGMIADIKA-----APGGSFILLHGC-AHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 168 ~~l~~~i~~-----~~~~~~~ii~~~-p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
+.+++.+.+ .+++...+++.. .+.-.|+.++ ..-++.+.++|++||+++|.||++.+|+-. ...+....
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRt---G~~fa~e~- 642 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRL---GVESAWEL- 642 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcc---cchhhHHh-
Confidence 445565542 123455555444 2677788765 555999999999999999999999999732 23333322
Q ss_pred hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH--h-hccCccc-CCChhHHHHH-HHHhCChhhHH
Q 015283 241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK--R-LARPMYS-NPPVHGARIV-ANVVGNPALFD 314 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~ 314 (410)
.+..++++ .++|.++ .| +.+|.+++ ++++.+.+...-. . ....++. +|...+...+ ...++++++..
T Consensus 643 ~gv~PDIi---~~gKgLt-gG~~Plaa~l~---~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~ 715 (817)
T PLN02974 643 LGCKPDIA---CYAKLLT-GGLVPLAATLA---TEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNP 715 (817)
T ss_pred cCCCCCEE---eeccccc-CCCCccEEEEE---cHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHH
Confidence 23334555 5899998 78 58899755 7786666532100 0 1222332 3433332222 44555544432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcC
Q 015283 315 EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTK 381 (410)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~ 381 (410)
.+.+...+..+.+. +.+.+.++ +.+. +.-+ ..-|.+.-+.+ ...+...++.++||++++
T Consensus 716 ~l~~~~~~l~~~l~---~~l~~~l~-~~p~---V~~V-Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~ 787 (817)
T PLN02974 716 NLIPPGSRLRELWD---EELVRAIS-SLPN---VERV-VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARP 787 (817)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHh-hCCC---eeEE-EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEe
Confidence 22222222222221 12222233 3321 1112 22233222211 112345555257999999
Q ss_pred CC---eEEec-CCCcccHHHHHHHHHHHh
Q 015283 382 DG---RISLA-GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 382 ~g---Ris~~-~~~~~~i~~~~~~l~~~l 406 (410)
.| |+..+ ..+++++++++++|.+.|
T Consensus 788 ~Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 788 LGNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred cCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 76 54322 348999999999998876
No 357
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.37 E-value=1.2e-10 Score=119.01 Aligned_cols=299 Identities=11% Similarity=0.083 Sum_probs=178.7
Q ss_pred ccCcCC---cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC--C----CCEEEEcCCCCcch
Q 015283 71 KEYLPI---EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--P----GAKVLISSPTWGNH 141 (410)
Q Consensus 71 ~~y~~~---~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~--~----gd~Vl~~~p~y~~~ 141 (410)
+.|.|. +|..++...+.+|+.+..|.+ +..+ +.++|+.+........+.+. . .+.|+++...++..
T Consensus 517 hPyqPe~~sqG~lq~i~elq~~l~eltGmd----~~Sl-~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn 591 (939)
T TIGR00461 517 HPFQPSNQVEGYQELIAQLEKWLCSITGFD----AISL-QPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN 591 (939)
T ss_pred CCCCchHHhHHHHHHHHHHHHHHHHHHCCC----Cccc-CCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC
Confidence 566654 466666666777766655543 3322 24566665553322333321 2 25788999999877
Q ss_pred hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccc
Q 015283 142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDV 220 (410)
Q Consensus 142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~De 220 (410)
...+...|.+++.++. ..++.+|+++|++++++++++++++++++|+| +|.+ ++ +++|+++|+++|.++++|.
T Consensus 592 Pasa~~~G~~Vv~V~~--d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 592 PASAAMAGMQVVPVNC--DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred HHHHHHCCCEEEEecc--CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEe
Confidence 7888889999999987 35678999999999986555788888899999 7884 34 8899999999999999999
Q ss_pred cCCC-CCCCCCCCchhHhHHHhhcCCcEEEEeccccccc----ccCCCcceEEEEeCCchhHHHHHHHH----------H
Q 015283 221 AYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAMNVVCSSSDLAARVKSQL----------K 285 (410)
Q Consensus 221 ay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~l~~~~~~~~~~~~~~~~~----------~ 285 (410)
++.. ... .. . ....+.+++++|.+|.|+ ..|-.+|.+.+ .+++...+-... .
T Consensus 666 Aq~~al~~--l~-~-------Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~v---r~~L~~~lPg~~v~~t~d~~gre 732 (939)
T TIGR00461 666 ANMNAQVG--LT-S-------PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KSHLIPFLPKHDVVSMITGIGGS 732 (939)
T ss_pred cChhhCCC--CC-C-------ccccCCCEEEecCCccCCCCCCCCCCCeEEEEE---hhhchhhcCCCcccccccCCCCc
Confidence 9643 221 10 0 123357888899999764 34555688754 444222211000 0
Q ss_pred hhccCccc---CCChhHHHHHH--HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcce---
Q 015283 286 RLARPMYS---NPPVHGARIVA--NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM--- 357 (410)
Q Consensus 286 ~~~~~~~~---~~~~~~~~~a~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~--- 357 (410)
..++.... +...+...+.. ..|. .+.+++..+..-.+..++.+.|+ + +.+ + ..+...+.
T Consensus 733 q~Iga~s~~~~g~a~~~l~a~~yi~~lG--------~~GL~~~a~~ailnAnYl~~rL~-~-~~~--~-l~~~~~~~~~h 799 (939)
T TIGR00461 733 KSIGSVSAAPYGSASILPISWMYIKMMG--------NEGLPKASVVAILNANYMATRLK-D-HYP--I-LFVGTLKHVAH 799 (939)
T ss_pred cccccccccccCcHHHHHHHHHHHHHHC--------HHHHHHHHHHHHHHHHHHHHHhh-c-cCc--c-cccCCCCceeE
Confidence 00011111 11111111111 1222 23456777777778899999887 5 311 1 12111122
Q ss_pred -eee--c------CCC-HHHHHHhhhcCcEEEc----CC-C----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 358 -FSF--T------GLN-KAQSDNMTNKWHVYMT----KD-G----RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 358 -~~~--~------~~~-~~~~~~ll~~~gi~v~----~~-g----Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
|++ . +.. .+..++|++ +|+... |. | |.+-.. ++++||++++.+.++-++
T Consensus 800 Efv~~~~~~~~~~g~~~~dIakrL~d-~G~hapt~~~pv~g~lmiepTE~e-skeelD~f~~al~~I~~e 867 (939)
T TIGR00461 800 ECILDLRPLKAKTGIEAIDVAKRLQD-YGFHAPTLSFPVPGTLMVEPTESE-SLEELDRFCDAMIAIKEE 867 (939)
T ss_pred EEEEeccchhhhcCCCHHHHHHHHHh-CCeeccccCCccCCeEEEEeeccC-CHHHHHHHHHHHHHHHHH
Confidence 111 1 123 445777776 588641 21 2 444434 889999999999877554
No 358
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.36 E-value=1.6e-11 Score=114.92 Aligned_cols=222 Identities=16% Similarity=0.117 Sum_probs=125.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc--CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.--...|+. +|.+.+++.+++....... .....-..++.+.+.+.... ..+++.+ +++|
T Consensus 16 ~~~lD~~~~~~~~~lGh~--~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~------~~~~v~f--~~sG 85 (339)
T PF00202_consen 16 REYLDFMSGYGSVNLGHN--HPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPG------GLDRVFF--ANSG 85 (339)
T ss_dssp EEEEESSHHHHTTTT-BT---HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSST------TEEEEEE--ESSH
T ss_pred CEEEECCCCccceecCCC--ccccchhHHHHhhhcccccccceeccchhhhhhhhhhcccc------ccceeee--ccCc
Confidence 468899877542344554 5888888888775422111 11111223455555555311 1468888 9999
Q ss_pred hhHHHHHHHHHH------HhCCCCEEEEcCCCCcchhh-hhhhC---------CC---CccceeeecCCC---cccChhh
Q 015283 112 TGSLRLAAALIE------RYFPGAKVLISSPTWGNHKN-IFNDA---------RV---PWSEYRYYDPKT---VGLDFEG 169 (410)
Q Consensus 112 t~a~~~~~~~~~------~~~~gd~Vl~~~p~y~~~~~-~~~~~---------g~---~~~~v~~~~~~~---~~~d~~~ 169 (410)
++|++.+.++.. ....-.+|+....+|.+... .+... +. .+..+|..+... ..-..+.
T Consensus 86 seAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 165 (339)
T PF00202_consen 86 SEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNA 165 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHH
Confidence 999999988876 33344789998888865432 11111 11 122233311000 0000111
Q ss_pred HHHHHhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 170 MIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 170 l~~~i~~-~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+++.+.+ ..+...++++...+...|... +.+-+++|.++|++||+++|.||++.+++-. ...+.... .+..+++
T Consensus 166 ~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRt---G~~~a~~~-~gv~PDi 241 (339)
T PF00202_consen 166 LEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRT---GKFFASEH-YGVDPDI 241 (339)
T ss_dssp HHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTT---SSSSGHHH-HTSSSSE
T ss_pred HHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceeccccccccccc---CCccceec-ccccCcc
Confidence 2222221 123455566555555567665 4555999999999999999999999998632 22333333 3333455
Q ss_pred EEEecccccccccCCCcceEEEEeCCchh
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDL 276 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~ 276 (410)
+ +++|.++ .|+.+|.+++ ++++
T Consensus 242 v---~~gK~l~-gG~p~sav~~---~~~i 263 (339)
T PF00202_consen 242 V---TFGKGLG-GGLPISAVLG---SEEI 263 (339)
T ss_dssp E---EEEGGGG-TTSSEEEEEE---EHHH
T ss_pred c---ccccchh-hhhhcccccc---cchh
Confidence 5 4579998 6799999755 6663
No 359
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.36 E-value=1.1e-10 Score=118.66 Aligned_cols=301 Identities=14% Similarity=0.077 Sum_probs=176.9
Q ss_pred ccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--CCC----CEEEEcCCCCcch
Q 015283 71 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG----AKVLISSPTWGNH 141 (410)
Q Consensus 71 ~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~~g----d~Vl~~~p~y~~~ 141 (410)
+.|.| .+|..++...+.+++.+..|. +.+.+ +-.+|+.+.......++.+ .+| ++|+++.-.|+..
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~Sl-~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtN 604 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGF----DAICM-QPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTN 604 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeEee-cCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccC
Confidence 66777 678777666666666555553 22333 2345565554443344432 133 5788888888666
Q ss_pred hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
...+...|.+++.++.. +++.+|+++|++++++.+++++++++.+|++-++. ..++++|+++|+++|+++++|.+
T Consensus 605 pasa~~~GieVv~Vp~D--~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv~vDgA 679 (954)
T PRK12566 605 PASAQMAGMRVVIVECD--PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQVYMDGA 679 (954)
T ss_pred HHHHHHCCCEEEEeccC--CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEEEEEee
Confidence 66677889999999983 45689999999999855567777777776655544 56799999999999999999999
Q ss_pred CCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc----CCCcceEEEEeCCchhHHHHHHHHHhhc---------
Q 015283 222 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY----AERIGAMNVVCSSSDLAARVKSQLKRLA--------- 288 (410)
Q Consensus 222 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~l~~~~~~~~~~~~~~~~~~~~~--------- 288 (410)
+. .+.... +. ....+.++++++..|.|+.| |..+|.+.+ .+. +...+...-
T Consensus 680 ~~-~a~~~l--~~------Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav---~~~----L~pfLp~~P~~d~~G~~~ 743 (954)
T PRK12566 680 NL-NAQVGL--AR------PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGV---RAH----LAPFVANHPVVPVEGPDP 743 (954)
T ss_pred Ch-hhccCC--CC------hhhcCCCEEEecCCcccCcCccCCCCccchhhh---hhh----hhhhccCCCCcCCCCCCC
Confidence 53 221111 10 12345788999999988532 333344311 222 333333110
Q ss_pred -cCcccCCChhH---HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee-----e
Q 015283 289 -RPMYSNPPVHG---ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-----S 359 (410)
Q Consensus 289 -~~~~~~~~~~~---~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-----~ 359 (410)
....++.+..+ ..++...+..-. .+ +.+.......+..++.+.|. + +.. ..+.++...+| .
T Consensus 744 r~ga~S~~~~gsa~~l~~A~~Yi~~lG-----~e-Lk~aa~~ailnAnYla~rL~-~-~~~--v~~~~~~~~~~hEfii~ 813 (954)
T PRK12566 744 NNGAVSAAPWGSASILPISWMYIAMMG-----PQ-LADASEVAILSANYLANQLG-G-AFP--VLYRGRNERVAHECILD 813 (954)
T ss_pred CCCceeecccchHHHHHHHHHHHHHHC-----HH-HHHHHHHHHHHHHHHHHHhH-h-hCC--CCcCCCCCCeeeEEEEE
Confidence 01122222222 122222222111 12 45666666778888888887 5 221 22321111111 1
Q ss_pred ecC------CC-HHHHHHhhhcCcEEEc----CCC---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 360 FTG------LN-KAQSDNMTNKWHVYMT----KDG---RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 360 ~~~------~~-~~~~~~ll~~~gi~v~----~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
+.. .+ .++.++|+ ++||... |.. |++..- .+++++|++++.|+++.++
T Consensus 814 ~~~l~~~~g~~~~dvakRL~-d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 814 LRPLKAQTGISEEDVAKRLM-DYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred ccccccccCCCHHHHHHHHH-HCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 111 23 34567777 4677642 332 887543 3889999999999988765
No 360
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.35 E-value=2.5e-10 Score=111.78 Aligned_cols=249 Identities=11% Similarity=0.078 Sum_probs=150.4
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCC-c---------c-cCCceEEEecCChhhHHHHHHHHHHHhC-------------
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNS-V---------L-KEQRVATVQGLSGTGSLRLAAALIERYF------------- 126 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~-~---------~-~~~~i~~~~t~ggt~a~~~~~~~~~~~~------------- 126 (410)
..+.......++.+.+.+|+.+..+. + . ....-.+ |+|||.|+..+....+...
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~--tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~ 196 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAF--CSGGTVANITALWVARNRLLKADGDFKGVARE 196 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEE--cCchHHHHHHHHHHHHHHhccccccccccccc
Confidence 34444455668888888887544321 0 0 1122455 8999999988754444321
Q ss_pred -----------CCCEEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCC
Q 015283 127 -----------PGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCA 189 (410)
Q Consensus 127 -----------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p 189 (410)
++..|++++-.|.+....+...|. +++.+|+ ++++.+|++.|++.+++ .+.+.++++.+..
T Consensus 197 gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~--d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataG 274 (522)
T TIGR03799 197 GLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT--DANNRIDVDALRDKCAELAEQNIKPLAIVGVAG 274 (522)
T ss_pred cchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe--CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 134688888889888888888887 6888888 45678999999998863 2223444554455
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
++.||. .+++++|+++|+++|+++++|.+|.+.... .+ ..+..... ...+.+..|.+|.++.| ..+|.++
T Consensus 275 tt~tGa---iDpl~eIa~i~~~~g~~lHVDaA~gg~~~~---~~--~~r~~l~gle~aDSit~d~HK~l~~P-~g~G~ll 345 (522)
T TIGR03799 275 TTETGN---IDPLDEMADIAQELGCHFHVDAAWGGATLL---SN--TYRHLLKGIERADSVTIDAHKQLYVP-MGAGMVL 345 (522)
T ss_pred CcCCCC---cCCHHHHHHHHHHcCCeEEEEchhhhHHHh---CH--HHHHHhcCchhCCEEEEChhhcCCcC-cccEEEE
Confidence 778999 566778888899999999999998754421 01 11222221 23567788999965433 4468873
Q ss_pred EEeCCchhHHHHHH---HHHhh-cc-----CcccCCChhH--HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 269 VVCSSSDLAARVKS---QLKRL-AR-----PMYSNPPVHG--ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 269 ~~~~~~~~~~~~~~---~~~~~-~~-----~~~~~~~~~~--~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
.++++..+.+.. ++... .. ....+.+..+ ..++...+. .+.++++.++..++++++.+.
T Consensus 346 --vr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG--------~~G~~~ii~~~~~la~~l~~~ 415 (522)
T TIGR03799 346 --FKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIG--------RKGYELLIDQSIEKAKYFADL 415 (522)
T ss_pred --EeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHH
Confidence 445554333322 11000 00 0001111111 112222222 234578888888899999998
Q ss_pred hhhccC
Q 015283 338 LSAKDK 343 (410)
Q Consensus 338 l~~~~g 343 (410)
|. +.+
T Consensus 416 L~-~~~ 420 (522)
T TIGR03799 416 IQ-QQP 420 (522)
T ss_pred Hh-hCC
Confidence 87 653
No 361
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.35 E-value=1e-10 Score=121.44 Aligned_cols=302 Identities=12% Similarity=0.089 Sum_probs=173.4
Q ss_pred ccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--CCCC----EEEEcCCCCcch
Q 015283 71 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPGA----KVLISSPTWGNH 141 (410)
Q Consensus 71 ~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~~gd----~Vl~~~p~y~~~ 141 (410)
+.|.| .+|..++...+.+++....|. +++.+. .++|+++........+.+ .+|| .|++++..|+..
T Consensus 529 hP~qp~e~~qG~l~~i~e~q~~l~eltG~----d~~sl~-~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~sn 603 (954)
T PRK05367 529 HPFAPAEQAAGYRELIDQLEAWLAEITGY----DAVSLQ-PNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTN 603 (954)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHCC----CCEEEC-ccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhh
Confidence 44554 245666767777776665553 356551 345555554432233332 4665 599999999888
Q ss_pred hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
...+...|.+++.+++. .++.+|+++|++.+.+.+.+..++++.+|++-.+. ..++++|+++|+++|+++++|.+
T Consensus 604 p~sa~~~G~~vv~v~~d--~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~---e~~I~eI~~i~h~~G~~v~VDgA 678 (954)
T PRK05367 604 PASAVMAGMKVVVVACD--ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVF---EETIREICEIVHEHGGQVYLDGA 678 (954)
T ss_pred HHHHHHCCCEEEEECCC--CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeee---cCCHHHHHHHHHHcCCEEEEECc
Confidence 88888999999999873 45689999999999764345666676666654333 34588899999999999999999
Q ss_pred CCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc----ccCCCcceEEEEeCCchhHHHHHHHHHhhc-----cCc-
Q 015283 222 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAMNVVCSSSDLAARVKSQLKRLA-----RPM- 291 (410)
Q Consensus 222 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~-----~~~- 291 (410)
+..-... .. . ....+.++++.|.+|.|+ ..|-.+|.+.+ .+. +...+.... +..
T Consensus 679 ~~~al~~-l~--~------pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~v---r~~----l~p~lpg~~v~~~~~~~~ 742 (954)
T PRK05367 679 NMNAQVG-LA--R------PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGV---KAH----LAPFLPGHPVQIAGGETG 742 (954)
T ss_pred ChhhccC-CC--C------hhhcCCCEEEecCcccCCCCcCCCCCceEEEee---ccc----ccccCCCCccCcCCCCCC
Confidence 7422111 11 0 012235678889999874 23444677744 333 332222111 000
Q ss_pred cc--CCChhHHH-H---HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-----Ccceeee
Q 015283 292 YS--NPPVHGAR-I---VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-----QIGMFSF 360 (410)
Q Consensus 292 ~~--~~~~~~~~-~---a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-----~~~~~~~ 360 (410)
.+ ..+..++. + +...+..-. .+.+++..++...+.+++.+.|+ +. .+ +.+..+ ....+-+
T Consensus 743 ~g~v~ta~~g~al~~~~a~~yi~~~G-----~~Glr~~a~~~~~~A~Yl~~~L~-~~-~~--~~~~~~~~~~~~e~i~~~ 813 (954)
T PRK05367 743 IGAVSAAPFGSASILPISWMYIRMMG-----AEGLRQATEVAILNANYIAKRLK-DH-YP--VLYTGANGRVAHECILDL 813 (954)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHH-hh-cC--ccccCCCCCcccceEEEe
Confidence 01 11111111 1 111111101 23445666666678888888887 43 10 112111 1222223
Q ss_pred c------CCC-HHHHHHhhhcCcEEEcC-----CC--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 361 T------GLN-KAQSDNMTNKWHVYMTK-----DG--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 361 ~------~~~-~~~~~~ll~~~gi~v~~-----~g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
. +.+ .+..++|++ +|+.... .+ ||+..- .+++++|++++.|+++..+
T Consensus 814 ~~~~~~~g~~~~di~krL~d-~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 814 RPLKESTGITVDDIAKRLID-YGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred ecccccCCCCHHHHHHHHHH-CCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 2 123 345666654 6886532 23 665442 3889999999999888654
No 362
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.33 E-value=4.3e-11 Score=103.75 Aligned_cols=319 Identities=14% Similarity=0.160 Sum_probs=176.6
Q ss_pred cHHHHHHHHHhhcc-CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEE
Q 015283 54 LDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 132 (410)
Q Consensus 54 ~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl 132 (410)
+|+|.++....+.. ....+|.. ...-+..+.+...+.+ -+-.+| +++|++|++++.++.+.+..-..|+
T Consensus 63 hp~VV~A~~kQmat~~tN~RFlh-d~lv~cA~~l~stlPe-------Lsvc~F--~NSGSEANDLALRLAR~ftkhqDvI 132 (452)
T KOG1403|consen 63 HPEVVRAGAKQMATISTNNRFLH-DELVQCARTLTSTLPE-------LSVCFF--VNSGSEANDLALRLARNFTKHQDVI 132 (452)
T ss_pred CHHHHHHHHHHHhHhcccchhhH-HHHHHHHHHHhhcCCC-------ceEEEE--ecCCchhhHHHHHHHHhhcccCceE
Confidence 46666665554422 22244532 2222333333333322 134667 8999999999999999888666777
Q ss_pred EcCCCCcchhh-hhhh------CCC---Cccce---eeecC-------------CCcccChhhHHHHHhc---CCCCcEE
Q 015283 133 ISSPTWGNHKN-IFND------ARV---PWSEY---RYYDP-------------KTVGLDFEGMIADIKA---APGGSFI 183 (410)
Q Consensus 133 ~~~p~y~~~~~-~~~~------~g~---~~~~v---~~~~~-------------~~~~~d~~~l~~~i~~---~~~~~~~ 183 (410)
+.+-.|.++.. ..+. .|. ++.++ |+.+- +....--+.+++.+.+ .+.....
T Consensus 133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA 212 (452)
T KOG1403|consen 133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA 212 (452)
T ss_pred EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence 77777755532 2221 111 22222 22110 0000111223333322 1233444
Q ss_pred EEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283 184 LLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 262 (410)
++-.+-+.=.|+++|++. .+++++..+..|-..|.||+.-+|+- .....|.+..+. ..++++ ++.|.+| .|.
T Consensus 213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGR--vG~hyWafq~y~-fiPDIV---tmgKpmG-NGh 285 (452)
T KOG1403|consen 213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGR--VGSHYWAFQTYN-FIPDIV---TMGKPMG-NGH 285 (452)
T ss_pred HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccc--cchhhhhhhhhc-cccchh---eecccCC-CCC
Confidence 554455666789988888 99999999999999999999988874 234556553321 222333 7899999 899
Q ss_pred CcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283 263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 340 (410)
.++.++. .+++.+.+...-..+. +++. +|.+.+...+ ...++++.+ + +..++....|...|+
T Consensus 286 PVa~Vat---tkeIA~Af~atgv~YF-NTyGGnPVsCAv~laVm~v~e~E~L----q-------~ha~~vG~~L~~lL~- 349 (452)
T KOG1403|consen 286 PVAAVAT---TKEIAQAFHATGVEYF-NTYGGNPVSCAVGLAVMRVCEDENL----Q-------EHAQQVGEKLEVLLR- 349 (452)
T ss_pred eeeEEec---cHHHHHHhccccceeh-hccCCCchhHHHHHHHHHHHhhhhH----H-------HHHHHHHHHHHHHHH-
Confidence 9999643 7786666655322222 2333 5555554444 556666544 2 222222233333332
Q ss_pred ccCCCCCccccc--CCcceeeecCC---------CHH----HHHHhhhcCcEEEcCCC------eE--EecCCCcccHHH
Q 015283 341 KDKSGKDWSFIL--RQIGMFSFTGL---------NKA----QSDNMTNKWHVYMTKDG------RI--SLAGLSLAKCEY 397 (410)
Q Consensus 341 ~~g~~~~~~~~~--~~~~~~~~~~~---------~~~----~~~~ll~~~gi~v~~~g------Ri--s~~~~~~~~i~~ 397 (410)
++.... +++. ...|.|+-+++ +.+ .+.++-+.++|.+...| .| .++. ++++.++
T Consensus 350 ~~k~kh--~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCF-neena~e 426 (452)
T KOG1403|consen 350 RLKQKH--ECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCF-NEENADE 426 (452)
T ss_pred HHhhhc--cceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCccc-ChhhHHH
Confidence 222111 2222 34455554433 112 24566667889998776 22 2333 8899999
Q ss_pred HHHHHHHHhhh
Q 015283 398 LADAIIDSYHN 408 (410)
Q Consensus 398 ~~~~l~~~l~~ 408 (410)
.+..|.++|.-
T Consensus 427 ~v~~ld~iLT~ 437 (452)
T KOG1403|consen 427 FVLGLDEILTV 437 (452)
T ss_pred HHHHHHHHHHH
Confidence 99999998753
No 363
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.31 E-value=3.1e-10 Score=99.78 Aligned_cols=309 Identities=13% Similarity=0.109 Sum_probs=179.8
Q ss_pred cHHHHHHHHHhhcc-C--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC----
Q 015283 54 LDVVKKAENLMLER-G--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF---- 126 (410)
Q Consensus 54 ~~~v~~a~~~~~~~-~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~---- 126 (410)
+|.+.+++.+..+. . ....|-.. ..++.+-+.+++. -+.++. ++.|.+|.+.+.++.+.+.
T Consensus 77 hpki~~aLqeq~~kLtlssrafYnd~--~~~f~~~vt~lf~--------~~kvlp--mnTGaEa~Eta~KLaR~wgy~~K 144 (427)
T KOG1402|consen 77 HPKIIKALQEQADKLTLSSRAFYNDV--LGEFAEYVTKLFG--------YDKVLP--MNTGAEAVETACKLARKWGYRKK 144 (427)
T ss_pred CHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHHHHHHhcC--------cceeee--cccchhHHHHHHHHHHHHHHhhc
Confidence 57888887776543 1 11334322 2366666666642 245666 6778999999988887552
Q ss_pred --C-CCEEEEc-CCCCcc-hhhh---------hhhCCCC----ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC
Q 015283 127 --P-GAKVLIS-SPTWGN-HKNI---------FNDARVP----WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 188 (410)
Q Consensus 127 --~-gd~Vl~~-~p~y~~-~~~~---------~~~~g~~----~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~ 188 (410)
| ...+++. .-+|.+ ...+ ...+|.- +..+|+ -|.+.|+..+++ ++.+.+++-.
T Consensus 145 ~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l~~--~~vaaFivEP 215 (427)
T KOG1402|consen 145 NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEALEVALKS--PNVAAFIVEP 215 (427)
T ss_pred cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHHHHHhcC--CCeeEEEeec
Confidence 3 2333333 233322 2111 1122211 223333 278899998887 5677777777
Q ss_pred CCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283 189 AHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 267 (410)
Q Consensus 189 p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l 267 (410)
.+...|++.|+.. +++..++|.+|++++|.||++.+++-. ...+...+ -.-.++++. +.|+++-.=..++.+
T Consensus 216 IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RT---Gk~la~d~-env~PDivi---lgKalSGG~~Pvsav 288 (427)
T KOG1402|consen 216 IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLART---GKLLACDY-ENVRPDIVI---LGKALSGGVYPVSAV 288 (427)
T ss_pred cccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhccccc---CcEEEeeh-hhcCCCeEE---EeccccCCeeeeEEE
Confidence 7999998887666 999999999999999999999888843 23332211 111224443 578886222445553
Q ss_pred EEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-
Q 015283 268 NVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK- 346 (410)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~- 346 (410)
.++++ +...+.......+.+...++.+++...|+ .+. -+...++.+.....+++.|. ++..+.
T Consensus 289 ---l~~~~----im~~~~pgeHgsTyggNpLg~~vaiAale---vi~-----eekL~era~~lG~~l~~~L~-~l~~~~p 352 (427)
T KOG1402|consen 289 ---LADDD----IMLNIKPGEHGSTYGGNPLGCAVAIAALE---VIV-----EEKLVERAAKLGEILRDQLN-KLQKKFP 352 (427)
T ss_pred ---EecHH----HHhccCCCccccccCCChHHHHHHHHHHH---HHH-----HHHHHHHHHHHHHHHHHHHH-hcccccc
Confidence 33666 44334433333233344444444433332 111 03555677778888888887 776321
Q ss_pred CcccccCCcceeeecCC---------CHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283 347 DWSFILRQIGMFSFTGL---------NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 347 ~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
.+.......|++.-+-+ .++.+..+ ++.|+..-|-+ ||+.+- ++++|+++.++.|.+++.
T Consensus 353 ~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 353 HVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred chhheeeccceEEEEEeccccccchhHHHHHHcc-cccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 01122344566533321 12334444 45799888764 887543 599999999999998874
No 364
>PLN02452 phosphoserine transaminase
Probab=99.30 E-value=1.3e-09 Score=102.28 Aligned_cols=319 Identities=14% Similarity=0.080 Sum_probs=177.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhh-ccC-------CCccCcC--CcccHHHHHHHHHHhcCCCCCcccCC-ce
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERG-------ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQ-RV 103 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-~~~-------~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~-~i 103 (410)
.+++|+.| +..+|+.|++++.+.+ +.. ...+..+ ..-+.+.++.+.+.+. .+ .+ .+
T Consensus 7 ~~~~f~pG-------P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~----~p--~~y~v 73 (365)
T PLN02452 7 RVFNFSAG-------PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLD----IP--DNYEV 73 (365)
T ss_pred ceEeeeCC-------CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhC----CC--CCceE
Confidence 45677644 3556899998876553 110 0112211 1123455555555543 21 22 34
Q ss_pred EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCC--CcccChhhHHHHHhcCCC
Q 015283 104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPK--TVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~i~~~~~ 179 (410)
++ ...|||.+.+.+ ..+.+.+||++++...+..+ +.+.++.+|...+.... +.. ...++++++ +. .+
T Consensus 74 ~~-l~Gsgt~~~ea~--~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~----~~-~~ 144 (365)
T PLN02452 74 LF-LQGGASTQFAAI--PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEW----EL-TP 144 (365)
T ss_pred EE-EeCccHHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHc----CC-CC
Confidence 44 267788888887 66667799988887755433 35566777763322211 111 123555554 22 12
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
....+.+++.+..||+.++ ++.++. ++++|+|.+ +.++..+.+.+.+ .+++ .|.-|.+|+
T Consensus 145 ~~~~v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~-Ss~g~~pidv~~~----------~v~~-~saqK~lGP 204 (365)
T PLN02452 145 DAKFVHICANETIHGVEFK--DYPDVG------NVPLVADMS-SNFLSKPVDVSKY----------GVIY-AGAQKNVGP 204 (365)
T ss_pred CCcEEEECCCCCCCcEecC--cccccC------CCeEEEECC-ccccCcccCHHHc----------CEEE-EecccccCC
Confidence 4455556677777898543 344442 389999999 6665432222211 2333 599999999
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHH--------hhccCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLK--------RLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNV 330 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~ 330 (410)
+|+ |.+++ ++++++++..... .....++.+|+..+..++...|+.- ..+ .++.+.++.+++
T Consensus 205 ~Gl--~~v~v---r~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l-----~~~gGl~~~~~r~~~~ 274 (365)
T PLN02452 205 SGV--TIVII---RKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDL-----LAQGGLKAMEKRNIRK 274 (365)
T ss_pred CCe--EEEEE---cHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHH-----HHccCHHHHHHHHHHH
Confidence 885 66655 7776655322100 0011222345554444443333211 011 367888999999
Q ss_pred HHHHHHHhhhcc-CCCCCcccccC--Ccc-eeee--cCCC-HHHHHHhhhcCcEEEcCCC------eEEecC-CCcccHH
Q 015283 331 RQKLFDSLSAKD-KSGKDWSFILR--QIG-MFSF--TGLN-KAQSDNMTNKWHVYMTKDG------RISLAG-LSLAKCE 396 (410)
Q Consensus 331 ~~~l~~~l~~~~-g~~~~~~~~~~--~~~-~~~~--~~~~-~~~~~~ll~~~gi~v~~~g------Ris~~~-~~~~~i~ 396 (410)
.+++.+.|. +. |+-. ....+ .+. ...| .+.. .+.+.+.++++|+...+|. |+|..+ ++.++++
T Consensus 275 a~~l~~~l~-~~~G~y~--~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~ 351 (365)
T PLN02452 275 ADLLYDAID-ESNGFYV--CPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVE 351 (365)
T ss_pred HHHHHHHHH-hCCCccc--CCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHH
Confidence 999999998 64 4311 11111 122 2222 2221 2334455566799999884 998554 7999999
Q ss_pred HHHHHHHHHhhh
Q 015283 397 YLADAIIDSYHN 408 (410)
Q Consensus 397 ~~~~~l~~~l~~ 408 (410)
.+++.+++.-++
T Consensus 352 ~L~~~m~~f~~~ 363 (365)
T PLN02452 352 KLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
No 365
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.27 E-value=5.9e-10 Score=103.60 Aligned_cols=313 Identities=15% Similarity=0.052 Sum_probs=168.7
Q ss_pred CcccccHHHHHHHHHhh-ccCC-------CccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283 49 LQPYVLDVVKKAENLML-ERGE-------NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 118 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~-~~~~-------~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~ 118 (410)
|+..+|+.|.+++.+.+ +... ..+..+ ..-..+.++.+.+.+ +.+ +..+|+++ ..|||++.+.+
T Consensus 11 GPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll----~~P-~~y~Vlfl-~GggT~~~ea~ 84 (364)
T PRK12462 11 GPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLL----GIP-DEYGVVFL-QGGSSLQFSMI 84 (364)
T ss_pred CCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEE-eccHHHHHHHH
Confidence 44556888888776544 2111 122222 111234444444443 221 01245552 56688888887
Q ss_pred HHHHHHhCCCCEEE--EcCCCCcc-hhhhhhhCCCCccceeeecCC--CcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 119 AALIERYFPGAKVL--ISSPTWGN-HKNIFNDARVPWSEYRYYDPK--TVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 119 ~~~~~~~~~gd~Vl--~~~p~y~~-~~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
.++.+.+||+++ +....|+. +...++.+| ++..+...... +..++++.+ .. .+....+.+++-...|
T Consensus 85 --~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~-~~d~~~v~~t~NETst 156 (364)
T PRK12462 85 --PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DW-DARAPFRHYVSNETVE 156 (364)
T ss_pred --HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----cc-CCCCcEEEEccCCCCc
Confidence 666778999665 44444442 344555666 44443321111 123444443 22 1234445556666777
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|+..+ ++.+.++.++|+|.+ +.++..+.+.+ . ..++..|.=|.+|+||+ +.+++ +
T Consensus 157 Gv~~~--------~~~~~~~~llvvD~s-S~~~s~pid~~-----~------~dvi~agsQKnlgP~Gl--tvviv---s 211 (364)
T PRK12462 157 GLQFP--------DAAGLPDSPLIADMS-SDFMSRPFDVE-----A------YGMVYAHAQKNLGPAGV--TVAII---R 211 (364)
T ss_pred eEecC--------cccccCCCeEEEEcC-chhhCCCCChH-----H------ccEEEeeccccCCCCce--EEEEE---C
Confidence 98775 223346899999999 77764432221 1 14556677899998886 55444 7
Q ss_pred chhHHHHHHHHH-------hh-ccCcccCCChhHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 274 SDLAARVKSQLK-------RL-ARPMYSNPPVHGARIVANVVGNPALFDEWKA--EMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 274 ~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
++.+++...... .. ..+++.+|+.....++...|+ ++ .++ .++.+.++.+++.+.+.+.+. +..
T Consensus 212 ~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~---~i--~~e~GGl~~~~~r~~~ka~~ly~~id-~~~ 285 (364)
T PRK12462 212 RALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLR---WI--RDEIGGVHAMRDINARKAAMLYATLD-ALN 285 (364)
T ss_pred HHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHH---HH--HHhccCHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 776665433111 11 112333555555444433322 11 122 457888889999999999998 665
Q ss_pred -CCCCcccccCC-cceeeecCC-----CHHHHHHhhhcCcEEEcCCC------eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 344 -SGKDWSFILRQ-IGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG------RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 344 -~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~g------Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
+-. ....+.. +-+-+...+ +.+++... ++.|+....|. |+|+.+ ++.+.++.|++-+++.-++
T Consensus 286 ~~~~-~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a-~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 286 EVID-CHAHRAARSTMNVAFRFRQPRLDTLFKEQS-TEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred Cccc-CCCChhhcCcceEEEEcCCHHHHHHHHHHH-HHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 210 1111111 111122222 22333344 45799887763 999665 6899999999998887554
No 366
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.24 E-value=5.1e-10 Score=100.61 Aligned_cols=203 Identities=21% Similarity=0.209 Sum_probs=119.1
Q ss_pred cHHHHHHHHHhhccC----CCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 54 LDVVKKAENLMLERG----ENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~----~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
...|.+|+++.--.. ..+.|+ ...|-+.+.+-.|+.+.. ++.++=.+..+||+|+.++ ++..++||
T Consensus 26 q~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfga-------E~ALVRpq~vSGTHAi~~~--Lfg~LrpG 96 (403)
T PF06838_consen 26 QLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGA-------EDALVRPQFVSGTHAIALA--LFGVLRPG 96 (403)
T ss_dssp HHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT--------SEEEEETTS-SHHHHHHHH--HHHH--TT
T ss_pred HHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCc-------hhhhhcccccchHHHHHHH--HHhcCCCC
Confidence 356777776653111 123443 233445555555555322 3445446778999999998 77889999
Q ss_pred CEEEEcC-CCCcchhhhh----------hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE-eCCCCCCCCCC
Q 015283 129 AKVLISS-PTWGNHKNIF----------NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL-HGCAHNPTGID 196 (410)
Q Consensus 129 d~Vl~~~-p~y~~~~~~~----------~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii-~~~p~NPtG~~ 196 (410)
|+++... .-|......+ +..|.+...+++ .+++.+|++.+++.++. ++++++ .-+....+=..
T Consensus 97 D~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L--~~dg~~D~~~i~~~~~~---~tk~v~IQRSrGYs~R~s 171 (403)
T PF06838_consen 97 DELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPL--TEDGTIDWEAIKKALKP---NTKMVLIQRSRGYSWRPS 171 (403)
T ss_dssp -EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B---TTSSB-HHHHHHHHHT---TEEEEEEE-S-TTSSS--
T ss_pred CeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEee--cCCCCcCHHHHHHhhcc---CceEEEEecCCCCCCCCC
Confidence 9999644 4555444433 345667777887 45578999999999985 555554 43334444456
Q ss_pred CCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC--cceEEEEeC
Q 015283 197 PTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER--IGAMNVVCS 272 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r--~G~l~~~~~ 272 (410)
++.++++++++++++ .++++++|++|..|... .++. +..-++..+|+-|..| .|+- -||+++
T Consensus 172 l~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~-~EP~---------~vGADl~aGSLIKNpG-GgiAptGGYIaG--- 237 (403)
T PF06838_consen 172 LTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET-QEPT---------EVGADLMAGSLIKNPG-GGIAPTGGYIAG--- 237 (403)
T ss_dssp --HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS-S-GG---------GGT-SEEEEETTSGGG-TTT-SS-EEEEE---
T ss_pred CCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc-cCcc---------ccchhheeccceeCCC-CCccCcCCEEec---
Confidence 789999999999986 58999999999999954 2222 2235789999999876 3432 277544
Q ss_pred CchhHHHHHHHH
Q 015283 273 SSDLAARVKSQL 284 (410)
Q Consensus 273 ~~~~~~~~~~~~ 284 (410)
.++++++...++
T Consensus 238 r~~lVe~~a~RL 249 (403)
T PF06838_consen 238 RKDLVERAAYRL 249 (403)
T ss_dssp SHHHHHHHHHHH
T ss_pred hHHHHHHHHhhh
Confidence 899888876655
No 367
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.23 E-value=2.4e-09 Score=102.74 Aligned_cols=188 Identities=18% Similarity=0.133 Sum_probs=123.9
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccc
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 154 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 154 (410)
|..-..+..+.+|+.+... .. ..+ ++|+|+++..+ +.+.+.+||.|+++..|+-+....+-..|+.+++
T Consensus 68 p~G~i~eAqe~aA~~fgAd------~t-yFv--vNGTS~ank~v--i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvy 136 (557)
T COG1982 68 PEGPIKEAQELAARVFGAD------HT-YFV--VNGTSTANKAV--INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVY 136 (557)
T ss_pred CCccHHHHHHHHHHHhCCC------ce-EEE--ECCccHHHHHH--HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEE
Confidence 3334456666677765332 22 333 68889999888 5666889999999999999998888899998888
Q ss_pred eeee-cCC---CcccChhhHHHHHhcCCCC-cEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 155 YRYY-DPK---TVGLDFEGMIADIKAAPGG-SFILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 155 v~~~-~~~---~~~~d~~~l~~~i~~~~~~-~~~ii~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
+... ++. -.+++.+.+.+.+.+++.. ..+++. ||| |++++ +++|++.+.++++++..|+++....
T Consensus 137 l~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vit----npTYdGv~~n---~~~i~~~~~~~~a~v~~deah~~~~- 208 (557)
T COG1982 137 LEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVIT----NPTYDGVCYN---LRKIVELLHHYGAWVLYDEAHPAHF- 208 (557)
T ss_pred ecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEe----cCccceEeec---HHHHHHHHhhcCceEEhhhcCcccc-
Confidence 7442 221 2478999998887775555 444443 776 88665 5566666899999999999954322
Q ss_pred CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC-chhHHHHHHHHHhh
Q 015283 228 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS-SDLAARVKSQLKRL 287 (410)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~-~~~~~~~~~~~~~~ 287 (410)
+ . .+..+ ........++++.|.+|.++ ++.-+.++.+..+ .-..+++...+...
T Consensus 209 ~-~-~~~l~--~~~~~~~~~~~tqS~HK~l~--alSQaS~iHv~~~~~~~~~r~nea~~~h 263 (557)
T COG1982 209 D-F-SPMLP--ESALNGGADFVTQSTHKLLA--ALSQASMIHVKDGRAVNHERFNEALMMH 263 (557)
T ss_pred c-c-cccCc--chhhhcCceEEEechhhhhh--hhhhhHHHhhCCCccCCHHHHHHHHHHH
Confidence 1 1 11111 11223568899999999974 6666665432221 22345666666544
No 368
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.18 E-value=1.4e-09 Score=113.09 Aligned_cols=311 Identities=10% Similarity=0.052 Sum_probs=175.1
Q ss_pred eeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----Cccc----HHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 39 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGL----AAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 39 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
++.|.| ++ +.|+.+.+.+.+. .++.+.|+| .+|. .++++.++++. |. +..++.+ +.
T Consensus 81 ig~G~y----~~-~~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt----G~--~~anaSl--~d 145 (954)
T PRK05367 81 IGQGYY----GT-HTPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT----GL--EIANASL--LD 145 (954)
T ss_pred cCCCCC----CC-cCcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH----CC--Chhhccc--cc
Confidence 566766 32 3355565544442 233455655 2343 35556666664 32 2678888 88
Q ss_pred ChhhHHHHHHHHHHHhCC--CCEEEEcCCCCcchhhhh----hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283 110 SGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~~--gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 183 (410)
++|.+.+.+.... .+.+ +|+|++++..|+.+...+ +..|.+++.++..+ |++ . ..+..
T Consensus 146 ~aTAa~ea~~~a~-~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d~~------~---~~~~~ 209 (954)
T PRK05367 146 EATAAAEAMALAK-RVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------ALD------H---DDVFG 209 (954)
T ss_pred cHHHHHHHHHHhh-hhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------CCC------c---ccEEE
Confidence 9999888774333 3445 499999999999887654 45788888887621 111 1 23444
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc---ccc
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL---GLY 260 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~---~~~ 260 (410)
+++..| |.+|.+. ++++|+++|+++|+++++|.....+... .+ ..+.+.+++++|..|.. |..
T Consensus 210 vlvq~p-~~~G~i~---d~~~i~~~ah~~Gal~~vda~~~Al~~l---~~-------pge~GaDi~vgs~qkfg~P~g~G 275 (954)
T PRK05367 210 VLLQYP-GTSGEVR---DYTALIAAAHARGALVAVAADLLALTLL---TP-------PGEMGADIAVGSAQRFGVPMGFG 275 (954)
T ss_pred EEEecC-CCCeeec---cHHHHHHHHHHcCCEEEEEehhhhccCC---CC-------hhhcCCCEEEeeCcccCCCCCCC
Confidence 443333 6789954 6888899999999999998764344432 11 13445678888888871 223
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHh--------------------hccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKR--------------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 320 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 320 (410)
|-..|++++ .+++.+++...+-. .++....+++.....++...+.--...-+-.+.+
T Consensus 276 GP~aGflav---r~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl 352 (954)
T PRK05367 276 GPHAAYFAV---RDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGL 352 (954)
T ss_pred CCCEEEEEE---CHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhH
Confidence 334788865 56644433211110 0011111111111111111110000000012346
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-Ccceeee-cCCCHH-HHHHhhhcCcEEEcCC--C--eEEecC-CCc
Q 015283 321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSF-TGLNKA-QSDNMTNKWHVYMTKD--G--RISLAG-LSL 392 (410)
Q Consensus 321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-~~~~~~~-~~~~~~-~~~~ll~~~gi~v~~~--g--Ris~~~-~~~ 392 (410)
+++.++...+..++.+.|+ ..|. +...+ ..+.+.+ .+.+.+ ..+++++ +||.+..- + |+|+.- .|+
T Consensus 353 ~~Ia~~~~~la~~l~~~L~-~~G~----~~~~~~~f~~~~~~~~~~~~~i~~~l~~-~gi~~~~~~~~~l~is~~e~~t~ 426 (954)
T PRK05367 353 KAIARRVHRLAAILAAGLR-ALGL----EVVHDSFFDTLTVEVGGDAAAVLARALA-AGINLRRVDDDHVGISLDETTTR 426 (954)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcCc----ccCCCCCCCeEEEeCCCCHHHHHHHHHH-CCceeccccCCEEEEEecccCCH
Confidence 7888999999999999998 7663 32211 1111211 122434 4556655 69988543 2 887653 388
Q ss_pred ccHHHHHHHHH
Q 015283 393 AKCEYLADAII 403 (410)
Q Consensus 393 ~~i~~~~~~l~ 403 (410)
++|+.+++.|.
T Consensus 427 ~did~l~~~l~ 437 (954)
T PRK05367 427 EDLAALLAVFG 437 (954)
T ss_pred HHHHHHHHHHc
Confidence 99999999986
No 369
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=6e-10 Score=100.20 Aligned_cols=328 Identities=13% Similarity=0.067 Sum_probs=188.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
.+++||++..++...++..+-+.+...++++-.. +-...|+...-+.++.+.|++++.. ++.|+. +-|
T Consensus 94 ~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-------E~aivY---s~g 163 (467)
T KOG1358|consen 94 KDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-------EDAIVY---SYG 163 (467)
T ss_pred ceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-------cceeee---ccc
Confidence 4688999988877777655455555556555222 2234587777888999999999643 466766 444
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-------C--C-c
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-------G--G-S 181 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-------~--~-~ 181 (410)
=.++..+ +-+....||-|.+.+-...+....++...-.+.++.. .|.+++++.+.+.. . . .
T Consensus 164 F~ti~S~--ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~R 234 (467)
T KOG1358|consen 164 FSTIESA--IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTR 234 (467)
T ss_pred cchhhhc--chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccce
Confidence 4555554 2233559999998887766666666655556666654 26677766654421 1 1 3
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC
Q 015283 182 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 261 (410)
Q Consensus 182 ~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 261 (410)
+.++.-...-+||. ..++.+|+++..||...+|+||.|+....+... ....-..-.+..+-+++++|++-+++..|
T Consensus 235 rfiv~EGl~~N~g~---i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~G-rGvteH~~v~~~~iDiv~~sm~~alas~G 310 (467)
T KOG1358|consen 235 RFIVVEGLYANTGD---ICPLPEIVKLKNKYKFRVILDESLSFGVLGKTG-RGVTEHFGVPITDIDIVTASMETALASGG 310 (467)
T ss_pred EEEEEEeeccCCCc---ccccHHHHHHHhhheEEEEEecccccccccccC-ccccccCCCCccceeeeeecccccccccC
Confidence 44455556778898 556778888899999999999998755433111 00000011223456789999999987555
Q ss_pred CCcceEEEEeCCchhHHHHHHHHHhhccC--ccc--CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 262 ERIGAMNVVCSSSDLAARVKSQLKRLARP--MYS--NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 262 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
|+..+ +.- +.. .+.+..+ .++ -|+.++ .++...+.-.+ |. ..+.+.++.....+.+.
T Consensus 311 ---gFc~G---~~~----i~~-hQrLSg~~Y~fSAslPp~la-~aa~~ai~i~~----~~---p~~~~~L~~k~~~~H~~ 371 (467)
T KOG1358|consen 311 ---GFCAG---KSF----IAD-HQRLSGSGYCFSASLPPYLA-GAAIKAILIEE----WN---PEIVQPLRAKVAKFHAA 371 (467)
T ss_pred ---ceeec---cee----eEe-eeeccccceeeeccCchhhh-hhHHHHHHHHh----hC---cchhhhhhccccccchh
Confidence 66432 332 111 1222111 122 333333 33322221110 11 23445566666666777
Q ss_pred hhhccCCCCCcccccCCcceeeecCC---------C----HHHHHHhhhcCcEEEcCC-------------C-eEEecC-
Q 015283 338 LSAKDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMTKD-------------G-RISLAG- 389 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ll~~~gi~v~~~-------------g-Ris~~~- 389 (410)
|+ .... +......-+....+.+ + .+.+++.+.+ |+.++.. + ||++..
T Consensus 372 l~-~~s~---~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~ 446 (467)
T KOG1358|consen 372 LS-SNSG---FIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAG 446 (467)
T ss_pred hh-cCCc---eEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCC
Confidence 76 4310 2222222222222211 1 2345566665 7776543 1 888765
Q ss_pred CCcccHHHHHHHHHHHhhh
Q 015283 390 LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 390 ~~~~~i~~~~~~l~~~l~~ 408 (410)
+++++++++++.|+++...
T Consensus 447 ~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 447 MSEEELERAAELIKEVASA 465 (467)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 6999999999999998654
No 370
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.14 E-value=4.9e-08 Score=87.25 Aligned_cols=331 Identities=14% Similarity=0.112 Sum_probs=196.3
Q ss_pred cCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh
Q 015283 46 TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 125 (410)
Q Consensus 46 ~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~ 125 (410)
+.+|+..++..-..++.. + +-.|....+...|++++.+.+. . +.++. |+-|.+|-.++.-++...
T Consensus 53 TDSGTgams~~qwaamm~----G-DEAYagsrs~~~L~~avkdifG-f-------q~~iP--thQGRgAE~Il~~i~ik~ 117 (471)
T COG3033 53 TDSGTGAMTDKQWAAMMR----G-DEAYAGSRSYYALADAVKDIFG-F-------QYTIP--THQGRGAENILIPILIKK 117 (471)
T ss_pred ccCCcccccHHHHHHHhc----c-chhhcccccHHHHHHHHHHhcC-c-------eeeee--ccCCccHHHHHHHHHhhh
Confidence 444555445444444322 2 3668888889999999999962 2 34555 888998888765444221
Q ss_pred ---CCCCEEEEcCC-CCcchhhhhhhCCCCccceeeecCC--------CcccChhhHHHHHhcCCCC--cEEEEeCCCCC
Q 015283 126 ---FPGAKVLISSP-TWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAAPGG--SFILLHGCAHN 191 (410)
Q Consensus 126 ---~~gd~Vl~~~p-~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~~~~--~~~ii~~~p~N 191 (410)
.||.+.++++- .|.......+..|+.++.++..+.. .+.+|++.|+++|.+.+.. +.+++..+.|.
T Consensus 118 ~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~Ns 197 (471)
T COG3033 118 GEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNS 197 (471)
T ss_pred ccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccc
Confidence 26655555554 4455666777889888877764321 1368999999999885433 33333333445
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCC-C---CCCC-CCCCchhHhHHHhhcC--CcEEEEecccccccccCCCc
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-G---FASG-SLDNDASSVRLFATRG--MELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~---~~~~-~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G~r~ 264 (410)
-.|+..|.+.+++..++|++|++.++.|.+.. . |.-. +.+-..|++.....+. ..+-...|..|.- +..+ -
T Consensus 198 agGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~-lvnm-G 275 (471)
T COG3033 198 AGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDG-LVNM-G 275 (471)
T ss_pred cCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccc-eecc-c
Confidence 57999999999999999999999999999842 1 2111 1112345555443321 1334455777763 2222 1
Q ss_pred ceEEEEeCCc---hhHHHHHHHHHh-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283 265 GAMNVVCSSS---DLAARVKSQLKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340 (410)
Q Consensus 265 G~l~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 340 (410)
|++. .+++ ++.+..+...-- .-..++.+...-...+.+.-|.+. .. ....+.++. ..++|.++|.
T Consensus 276 Gfl~--~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~-~~------~~yl~~Rv~-Qv~YL~~~l~- 344 (471)
T COG3033 276 GFLC--FKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREG-VN------FDYLAHRVA-QVQYLADGLE- 344 (471)
T ss_pred cEEE--ecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHh-cC------cHHHHHHHH-HHHHHHHHHH-
Confidence 5553 2343 233333221110 111233333333334444334332 11 012233333 4567888998
Q ss_pred ccCCCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCCC---------------------eEE
Q 015283 341 KDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG---------------------RIS 386 (410)
Q Consensus 341 ~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~g---------------------Ris 386 (410)
+.|. .+..|.+|.-+|++. ...++.+|.++.||-.+--| |++
T Consensus 345 ~~GV----pi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRlt 420 (471)
T COG3033 345 EAGV----PIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLT 420 (471)
T ss_pred hcCC----eeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEe
Confidence 8883 566777787777642 13457788888898765422 887
Q ss_pred ecC--CCcccHHHHHHHHHHHhhh
Q 015283 387 LAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 387 ~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
+.. .|.+.+|.+++.++++.++
T Consensus 421 ipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 421 IPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred ccccccchhHHHHHHHHHHHHHhc
Confidence 663 3778899999999888754
No 371
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.14 E-value=5.6e-09 Score=98.67 Aligned_cols=269 Identities=14% Similarity=0.031 Sum_probs=158.3
Q ss_pred HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-----CceEEEecCChhhHHHHHHHHHHHh----
Q 015283 55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-----QRVATVQGLSGTGSLRLAAALIERY---- 125 (410)
Q Consensus 55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-----~~i~~~~t~ggt~a~~~~~~~~~~~---- 125 (410)
..+.+.+...++... ..|.......++.+.+.+|+.+..|.+-+. ..-++ |+|||+++..+....+..
T Consensus 54 ~i~~~~l~~~~n~n~-~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~--t~Ggt~anl~al~aAR~~~~~~ 130 (373)
T PF00282_consen 54 SILADLLASALNQNG-FTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVF--TSGGTEANLYALLAARERALPR 130 (373)
T ss_dssp HHHHHHHHHHHT-BT-TSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcccc-cccccccccccchHHHHHHHHHHhCCcccccccCCCceeE--eccchHHHHHHHHHHHHHHhhh
Confidence 444555666665543 445445567789999999988887775211 23445 899999998764333321
Q ss_pred --CCC-----C-EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCC
Q 015283 126 --FPG-----A-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTG 194 (410)
Q Consensus 126 --~~g-----d-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG 194 (410)
..| + .|++++-++.+....+...|..++.||+. +++.+|+++|++.+.+. +..+.+++.+.....||
T Consensus 131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~--~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G 208 (373)
T PF00282_consen 131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTD--EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTG 208 (373)
T ss_dssp HHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BB--TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred hhhcccccccccccccccccccHHHHhcceeeeEEEEecCC--cchhhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence 112 2 46666668889999999999999999984 46789999999887652 22344555566677788
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
. .+++++|+++|+++++++.+|.+|.+..+-..... .. ......-+-+..+.+|.++.| ...|++ ..+++
T Consensus 209 a---~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~--~~--~~gi~~adSit~d~HK~l~~P-~~~~~~--l~r~~ 278 (373)
T PF00282_consen 209 A---IDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYR--HL--LFGIERADSITIDPHKWLGVP-YGCGVL--LVRDK 278 (373)
T ss_dssp B---B-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTG--GG--GTTGGGESEEEEETTTTTS-S-SS-EEE--EESSG
T ss_pred c---ccCHHHHhhhccccceeeeeccccccccccccccc--cc--ccccccccccccchhhhhcCC-ccceeE--Eeecc
Confidence 8 78899999999999999999999988332100011 11 111112334456899999855 667877 56666
Q ss_pred hhHHHHHHHHHhhcc------------Cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015283 275 DLAARVKSQLKRLAR------------PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 341 (410)
Q Consensus 275 ~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 341 (410)
.........-..+.. ..+. ..+. ...++..++. +...=.+.+++..++..+..+++.+.|+ +
T Consensus 279 ~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~---l~~~G~~G~~~~i~~~~~~a~~l~~~l~-~ 353 (373)
T PF00282_consen 279 SDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWAT---LKSLGREGYRERIRRCIELARYLADRLR-K 353 (373)
T ss_dssp GGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred cchHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 643321100001111 0011 2233 3344322221 1111134566777778888899999998 7
Q ss_pred cC
Q 015283 342 DK 343 (410)
Q Consensus 342 ~g 343 (410)
.+
T Consensus 354 ~~ 355 (373)
T PF00282_consen 354 DP 355 (373)
T ss_dssp ST
T ss_pred CC
Confidence 65
No 372
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.08 E-value=1.1e-08 Score=106.13 Aligned_cols=315 Identities=12% Similarity=0.046 Sum_probs=173.5
Q ss_pred eeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCcCC--cc----cHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 39 LGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPI--EG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 39 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~--~g----~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
++.|.| ++ .+|+.+.+.+.+.... ...+.|.+. +| ..++++.++++..- +++++.+ +.++
T Consensus 108 iG~G~y----~~-~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~------~~anaSL--~d~a 174 (993)
T PLN02414 108 IGMGYY----NT-HVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGL------PMSNASL--LDEG 174 (993)
T ss_pred cCCCCC----Cc-cCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCC------ChhhEee--cCCh
Confidence 455655 22 2467776776654422 222455543 34 45677777777422 2688999 8999
Q ss_pred hhHHHHHHHHHHHhCCC--CEEEEcCCCCcchhhhhh----hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283 112 TGSLRLAAALIERYFPG--AKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 185 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~g--d~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii 185 (410)
|.+.+.+.... .+.+| |+|++++..|+.+...++ ..|.+++.++..+ .+ ... .....++
T Consensus 175 TAaaea~~~a~-~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~-----~~------~~~---~~v~~vl 239 (993)
T PLN02414 175 TAAAEAMAMCN-NILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD-----FD------YSS---GDVCGVL 239 (993)
T ss_pred HHHHHHHHHHH-hcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh-----hc------ccc---CceEEEE
Confidence 99999874333 34544 789999999999876665 4577777776521 01 001 1232333
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc---cccCC
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL---GLYAE 262 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~---~~~G~ 262 (410)
+ .--|.+|.+ .++++|+++|+++|+++++ .+ ..++..... + ....+.++++++..|.. |..|-
T Consensus 240 v-q~P~~~G~v---~dv~~I~~~ah~~GaL~iV-aa-d~lal~~l~----~----pge~GADi~vgsgqKwg~P~G~GGP 305 (993)
T PLN02414 240 V-QYPATDGEV---LDYAEFVKNAHANGVKVVM-AT-DLLALTMLK----P----PGEWGADIVVGSAQRFGVPMGYGGP 305 (993)
T ss_pred E-ecCCCCeEE---cCHHHHHHHHHHcCCEEEE-EE-CHHHhcCCC----C----HhhccCcEEEECCCccccCCCCCCC
Confidence 1 122348995 4577888889999999999 44 222221111 0 12335678888888876 22345
Q ss_pred CcceEEEEeCCchhHHHHHHHHHh--------------------hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283 263 RIGAMNVVCSSSDLAARVKSQLKR--------------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 322 (410)
+.|++++ .++..+.+-..+-. .++....+++.....++...+.--....+-...+++
T Consensus 306 ~aGflav---r~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~ 382 (993)
T PLN02414 306 HAAFLAT---SQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 382 (993)
T ss_pred CeeEEEE---CHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHH
Confidence 5788865 55543322100000 000011111221111211111100000000133578
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCccccc-CCcceeee-cCCCHHHHHHhhhcCcEEEcCC--C--eEEecC-CCcccH
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-RQIGMFSF-TGLNKAQSDNMTNKWHVYMTKD--G--RISLAG-LSLAKC 395 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~~--g--Ris~~~-~~~~~i 395 (410)
+.+++.++..++.+.|. ..|. +... +..+.+.+ .+...+..+++.+ +||.+... + |+|+.. .|++||
T Consensus 383 Ia~ri~~la~~l~~~L~-~~G~----~~~~~~~f~~vt~~~~~~~~v~~~L~~-~gI~l~~~~~~~lrvs~~e~~T~edI 456 (993)
T PLN02414 383 IAQRVHGLAGVFAAGLK-KLGF----QVQSLPFFDTVKVKCSDADAIADAAAK-VGINLRVVDANTVTVSFDETTTLEDV 456 (993)
T ss_pred HHHHHHHHHHHHHHHHh-hcCC----ccCCCCCcCeEEEecCCHHHHHHHHHH-CCCeeEEecCCeEEEEeeccCCHHHH
Confidence 88999999999999998 7773 3322 22222222 1223334556654 69877533 3 888654 388999
Q ss_pred HHHHHHHHH
Q 015283 396 EYLADAIID 404 (410)
Q Consensus 396 ~~~~~~l~~ 404 (410)
+.+++.|+.
T Consensus 457 d~L~~~l~~ 465 (993)
T PLN02414 457 DKLFKVFAG 465 (993)
T ss_pred HHHHHHHcc
Confidence 999999963
No 373
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.04 E-value=5e-10 Score=91.19 Aligned_cols=66 Identities=18% Similarity=0.278 Sum_probs=57.1
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCC--CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN 140 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~--~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~ 140 (410)
..|.+..|.+++|+++++|+.+.++ ..+++++|++ |+|++++++.++ ...+.+||.|++++|+|+.
T Consensus 86 a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~l~--~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 86 ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEIIM--FCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHHHH--HHHcCCCCEEEEeCCCCCC
Confidence 4488889999999999999988777 5678899999 999999999984 3447799999999999974
No 374
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.02 E-value=6.4e-08 Score=89.51 Aligned_cols=361 Identities=15% Similarity=0.135 Sum_probs=197.5
Q ss_pred CCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCC
Q 015283 16 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 95 (410)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~ 95 (410)
++.+.+.++.+...........++..|.. ..+.+....-..++..+. +.-+..-|+ +..++..+...++...++
T Consensus 61 l~~d~v~~~i~~~~~ld~~~~~~~vS~~v--~~~~~~~~~l~~~~~~k~-N~l~~d~fp---~~~~~e~~~Vnm~~~L~~ 134 (491)
T KOG1383|consen 61 LPKDAVLELINDELMLDGNPRLGLASGVV--YWGEPELDKLIMEAYNKF-NPLHPDEFP---VVRKLEAECVNMIANLFN 134 (491)
T ss_pred CCHHHHHHHHHHHhccCCCcccCeeeEEE--ecCCcchhhHHHHHHhhc-CccCccccc---hhHHHHHHHHHHHHHHhc
Confidence 34455555554443322234566666664 233322223333334332 222223353 455666666666555544
Q ss_pred CcccCCceEEEecCChhhHHHHHHHHHHHhC---CC---CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283 96 SVLKEQRVATVQGLSGTGSLRLAAALIERYF---PG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169 (410)
Q Consensus 96 ~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~---~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 169 (410)
.+ ++ .+-..|.|||+++.++-+-..... .| ..++++...+..+....+..+.+++.+|+. +..+.+|+.+
T Consensus 135 ~~--~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~-~~~~~~D~~k 210 (491)
T KOG1383|consen 135 AP--SD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLD-EGDYRVDPGK 210 (491)
T ss_pred CC--cc-ccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeecc-ccceEecHHH
Confidence 33 22 222338999999555433222221 23 456666777778888888889999999984 4778999999
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH-cCCcccccccCCCCCC--CCCCCchhHhHHHhhcCCc
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGME 246 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Deay~~~~~--~~~~~~~~~~~~~~~~~~~ 246 (410)
+.+.+++ +++.++..-|+.|+|. .++.++|.++..+ +++.+.+|.+-.+|.. +......+.++. .+-.
T Consensus 211 ~~~~i~e---Nti~lv~~~~~~p~G~---~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~---p~V~ 281 (491)
T KOG1383|consen 211 VVRMIDE---NTIMLVGSLPNFPTGE---IEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRV---PGVT 281 (491)
T ss_pred HHHHhcc---ceEEEEEEcCCCCccc---hhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCC---CCce
Confidence 9999997 7888888889999999 8888899988998 9999999999777764 211111222211 1111
Q ss_pred EEEEecccccccccCCCcceEEEEeCCchhH-HHHH---HHHHhhccCcccCCChhHHH-HH--HHHhCChhhHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLA-ARVK---SQLKRLARPMYSNPPVHGAR-IV--ANVVGNPALFDEWKAE 319 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~-~a--~~~l~~~~~~~~~~~~ 319 (410)
-|.+ +-+| +|+.--..||++ -.++++. .++. +++.....+.+.+.+..+.. ++ +.+++-+ .+.
T Consensus 282 Sisa-~~HK-YGl~~~G~~~vl--~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG------~eG 351 (491)
T KOG1383|consen 282 SISA-DGHK-YGLAPAGSSWVL--YRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLG------EEG 351 (491)
T ss_pred eEee-ccce-eeeeecCcEEEE--EcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhh------HHH
Confidence 1222 2233 333333358874 3444421 1111 01111111112222222212 22 3333322 344
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCccc-ccCCcceeeecC--CCHHHHHHhhhcCcEEEc----CCC-eEEecCC-
Q 015283 320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTG--LNKAQSDNMTNKWHVYMT----KDG-RISLAGL- 390 (410)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~--~~~~~~~~ll~~~gi~v~----~~g-Ris~~~~- 390 (410)
..+..+++.+....++++++ +.+. +.+ -.|..++..|-. ++.-.+..+|.+.|-.+. |.+ -|++..+
T Consensus 352 Y~~~~~~ive~~~~l~egie-~i~~---i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~ 427 (491)
T KOG1383|consen 352 YRENTQNIVETARKLREGIE-NIKG---IKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVH 427 (491)
T ss_pred HHHHHHHHHHHHHHHHHhhh-cccc---ceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCCCceEEEEEeee
Confidence 56777788889999999998 6642 332 334444334432 233334455555677663 333 4444321
Q ss_pred -CcccHHHHHHHHHHHhhhc
Q 015283 391 -SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 391 -~~~~i~~~~~~l~~~l~~~ 409 (410)
.++-.++++.-|+++++++
T Consensus 428 ~~~~~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 428 AREDVADRFVADIRKVVEEL 447 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 3344577888888887654
No 375
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.89 E-value=1e-06 Score=79.06 Aligned_cols=334 Identities=14% Similarity=0.124 Sum_probs=186.9
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccHHHHHHHHHH-hcCCCCCcccCCceEEEec
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAEL-LFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~aia~~-~~~~~~~~~~~~~i~~~~t 108 (410)
.-|.|-..++ + .+..|++++-..+.+...-+|+. ..-.-+-.|.+++. -...++.+. ..+=+-||.
T Consensus 41 ~gieLIaSEN-----F--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp-~kWGVNVQp 112 (477)
T KOG2467|consen 41 RGIELIASEN-----F--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDP-EKWGVNVQP 112 (477)
T ss_pred cceeEeeccc-----c--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCH-HHCceeecc
Confidence 4467776654 2 36889998877765433344432 11112222222221 112233321 234444667
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh-----hhhhCCCCc-----cceeeecCCCcccChhhHHHHHhcCC
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-----IFNDARVPW-----SEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~-----~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
.+|+-|+..+ ..+.+.|+|+|+-.+.-.+++.+ --+...+.- .++.+ ++.++-+|.|.|++.....
T Consensus 113 ~SGSPANfav--Ytall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv-~~~TG~IDYD~Le~~A~~f- 188 (477)
T KOG2467|consen 113 YSGSPANFAV--YTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV-DPSTGYIDYDKLEKTATLF- 188 (477)
T ss_pred CCCCchhhHH--HhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceee-CCCCCceehHHHHHHHHhc-
Confidence 8899999887 34558899999976533322211 111111111 22233 3466779999998776553
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++++++...-. ....+ |...+.++|.+.|++++.|.++- +++..+. -+.+ ...++|+..+..|++
T Consensus 189 -rPk~iiaG~Sa--Y~R~~---DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~v--ipsP------Fey~DiVTTTTHKsL 254 (477)
T KOG2467|consen 189 -RPKLIIAGTSA--YSRLI---DYARFRKIADKVGAYLMADMAHISGLVAAGV--IPSP------FEYCDIVTTTTHKSL 254 (477)
T ss_pred -CCcEEEecccc--chhhc---cHHHHHHHHHhcCceeehhhhhHHHHHhccc--CCCc------ccccceeeccccccc
Confidence 56677743222 22333 45556666899999999999973 3332211 0111 123788899999986
Q ss_pred cccCCCcceEEEEeCCc--------hhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSS--------DLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
-|-|.|.++..-+.+ ++.-.+.+.+....++... +|-.+...+++-+|+.-. .-+++++.++..
T Consensus 255 --RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~-----tpefk~Yq~qV~ 327 (477)
T KOG2467|consen 255 --RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM-----TPEFKEYQKQVL 327 (477)
T ss_pred --cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC-----CHHHHHHHHHHH
Confidence 588877776533211 1122344444444444322 444444343333343211 122468888899
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCccee-eec-----CCCHHHHHHhhhcCcEEE------------cCCC-eEEec-
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFT-----GLNKAQSDNMTNKWHVYM------------TKDG-RISLA- 388 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~ll~~~gi~v------------~~~g-Ris~~- 388 (410)
++.+.|.+.|. +.| ++.....+-.+ +.+ |++...+++.++..+|.. .|+| ||.-+
T Consensus 328 ~Nakala~~l~-~~G----y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPA 402 (477)
T KOG2467|consen 328 KNAKALASALI-SRG----YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPA 402 (477)
T ss_pred HHHHHHHHHHH-HcC----ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchh
Confidence 99999999999 888 45555444444 333 446667777777656644 3445 88533
Q ss_pred ----CCCcccHHHHHHHHHHHh
Q 015283 389 ----GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 389 ----~~~~~~i~~~~~~l~~~l 406 (410)
+.-++|++++.+-|.+++
T Consensus 403 mTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 403 MTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred hcccCccHHHHHHHHHHHHHHH
Confidence 346788888888887665
No 376
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.88 E-value=3.6e-07 Score=83.93 Aligned_cols=141 Identities=16% Similarity=0.181 Sum_probs=103.7
Q ss_pred CccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC--CC----CEEEEcCCCCcc
Q 015283 70 NKEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PG----AKVLISSPTWGN 140 (410)
Q Consensus 70 ~~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~--~g----d~Vl~~~p~y~~ 140 (410)
.+.|.| .+|..++...+.+|+..-.|. +.|.+ |.+.|+++-..-..+.+.+. .| +.+++|+..++.
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsL-QP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT 169 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT 169 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeec-cCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence 356666 457778888888887666553 44544 34445544443222344432 33 689999999999
Q ss_pred hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccc
Q 015283 141 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 220 (410)
Q Consensus 141 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 220 (410)
....+...|.+++.|++ .+++.+|+++|+++..+ ++..+++++|+ ..|.. .+++++|+++.+++|..+..|.
T Consensus 170 NPASAam~G~~VV~V~~--~~~G~VDlddLk~k~~~---~~AalMiTnPs-T~GvF--E~~I~ei~~ivH~~Gg~vY~DG 241 (496)
T COG1003 170 NPASAAMAGFKVVVVKC--DENGNVDLDDLRAKAED---NLAALMITNPS-TLGVF--EEDIREICEIVHEAGGQVYYDG 241 (496)
T ss_pred ChhhHhhcCceEEEEec--CCCCCccHHHHHHHhcc---ceeEEEeccCc-ccccc--hhhHHHHHHHHHHcCCEEEecC
Confidence 99899999999999998 56778999999999985 77777777765 23542 6679999999999999999999
Q ss_pred cCC
Q 015283 221 AYQ 223 (410)
Q Consensus 221 ay~ 223 (410)
+-.
T Consensus 242 ANl 244 (496)
T COG1003 242 ANL 244 (496)
T ss_pred cch
Confidence 943
No 377
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.83 E-value=4.1e-06 Score=83.31 Aligned_cols=166 Identities=8% Similarity=0.018 Sum_probs=111.6
Q ss_pred cHHHH-HHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC--C---
Q 015283 54 LDVVK-KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--P--- 127 (410)
Q Consensus 54 ~~~v~-~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~--~--- 127 (410)
++.+. +.+....+... ..|........+.+.+.+++.+..|.+ ...-.+ |+|||.|+..+..+.+... |
T Consensus 96 ~paila~~~a~~~N~n~-~~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~--TsGGT~ANl~aL~~AR~~k~~p~a~ 170 (608)
T TIGR03811 96 MPAILAYNYAMLWNGNN-VAYESSPATSQMEEEVGKEFATLMGYK--NGWGHI--VADGSLANLEGLWYARNIKSLPFAM 170 (608)
T ss_pred HHHHHHHHHHHHhCCCC-CccccCchHHHHHHHHHHHHHHHhCCC--CCCeEE--eCChHHHHHHHHHHHHHhhhccchh
Confidence 45554 44444444432 555555567788888888887777654 234445 8999999987644443321 1
Q ss_pred ---------------------------------------------C------CEEEEcCCCCcchhhhhhhCCC---Ccc
Q 015283 128 ---------------------------------------------G------AKVLISSPTWGNHKNIFNDARV---PWS 153 (410)
Q Consensus 128 ---------------------------------------------g------d~Vl~~~p~y~~~~~~~~~~g~---~~~ 153 (410)
| -.++++...|.++.+.+...|. +++
T Consensus 171 ~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv 250 (608)
T TIGR03811 171 KEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVI 250 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEE
Confidence 0 0577888888889989888888 578
Q ss_pred ceeeecCCCcccChhhHHHHHhc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCC--cccccccCCCCC
Q 015283 154 EYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH--IPFFDVAYQGFA 226 (410)
Q Consensus 154 ~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~--~li~Deay~~~~ 226 (410)
.||+ ++++.+|++.|++.+.+ .+..+..|+-+.....+|.+=+.+++.+|++.++++|+ ++.+|.||.++.
T Consensus 251 ~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 251 PVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred Eeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence 8888 46688999999988864 23334555556677888984444444444444478898 699999999864
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.78 E-value=1.6e-06 Score=80.00 Aligned_cols=233 Identities=17% Similarity=0.093 Sum_probs=139.8
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCccc--HHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGL--AAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~--~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
++||..--+.....|-+..++++.+++.+.........|.-..|- .+++ .+++.+....+ .+..++ +++.+
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~~~~~~----aea~~i--vnnn~ 93 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELLCGLTG----AEAAAI--VNNNA 93 (395)
T ss_pred hhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHHhcccc----hhheee--ECCcH
Confidence 456655322223445555589999988887755332344333332 2333 33444333322 356666 67777
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcC-----CCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE-e
Q 015283 113 GSLRLAAALIERYFPGAKVLISS-----PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL-H 186 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~-----p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii-~ 186 (410)
.|+..+ +..+.++.+|++.- ++.++...+++..|++++++-..+. ....+++..|++ ++.+++ +
T Consensus 94 aAVll~---~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~----t~~~d~~~AIne---~ta~llkV 163 (395)
T COG1921 94 AAVLLT---LNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTNR----THLKDYELAINE---NTALLLKV 163 (395)
T ss_pred HHHHHH---HhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEecccCc----CCHHHHHHHhcc---CCeeEEEE
Confidence 777776 33444455555433 4677888999999999998865332 467888888987 555555 3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
-+.|.+.--.++ .++++++|+++|+++++|.+-...... .+.++.+... ..+++++|-.|.|| |.+.|.
T Consensus 164 ~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~-----e~~l~~~la~-GaDLV~~SgdKllg--GPqaGi 232 (395)
T COG1921 164 HSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDK-----EPDLREALAL-GADLVSFSGDKLLG--GPQAGI 232 (395)
T ss_pred eecccccccccc---HHHHHHHHHHcCCCEEEecCCcccccc-----ccchhHHHhc-CCCEEEEecchhcC--CCccce
Confidence 333332212233 455677799999999999994333321 1233344433 36778889999986 777888
Q ss_pred EEEEeCCchhHHHHHHHHHhhccCcccCCChhHH
Q 015283 267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 300 (410)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (410)
+++ .++++++++..- ..+.+......++.
T Consensus 233 i~G---kKelI~~lq~~~--l~Ralrv~K~tla~ 261 (395)
T COG1921 233 IVG---KKELIEKLQSHP--LKRALRVDKETLAA 261 (395)
T ss_pred Eec---hHHHHHHHHhhh--hhhhhhcCcHhHHH
Confidence 655 999888876632 33444444444433
No 379
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.70 E-value=6.7e-06 Score=72.99 Aligned_cols=297 Identities=11% Similarity=0.025 Sum_probs=160.1
Q ss_pred ccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC--CCCEEEEcCCCCcchhhhhhhCCCCccce
Q 015283 78 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PGAKVLISSPTWGNHKNIFNDARVPWSEY 155 (410)
Q Consensus 78 g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v 155 (410)
+..++-+.+...+....|.. ++++++ +.+.+-.+.-. +.+.++ +|++|++++-.-.+...+...--+++..+
T Consensus 73 ~W~~lp~~lgdklApLiGA~--~~Evvv--~dtts~nl~k~--L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~ 146 (407)
T COG3844 73 DWFDLPERLGDKLAPLIGAR--AGEVVV--TDTTSINLFKV--LAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGI 146 (407)
T ss_pred chhhchhHHHHHhhhhhcCC--CCceEE--eCCcchHHHHH--HHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcc
Confidence 33445555555554444432 567766 54444444443 445555 79999998854333222111111111111
Q ss_pred eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283 156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 235 (410)
Q Consensus 156 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~ 235 (410)
-. .-.....+.++++.+.. .+.++++++.+.-||+.+ ++.+|-.+++++|++++.|-+++.-... .+
T Consensus 147 ~~--~~~~~~~P~~~~~~~~d---d~AvV~L~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsaGavp-~~---- 213 (407)
T COG3844 147 GY--DLEGVIAPRALEEAITD---DVAVVLLSHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSAGAVP-VD---- 213 (407)
T ss_pred cc--cceeeeChHHHHHhhcc---ceEEEEecccccccccee---eHHHHHHHHHhcCceEEeehhcccCCcc-ee----
Confidence 11 11122456788888875 788888899999999955 5667777799999999999998765542 11
Q ss_pred HhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHHHHH-------------------hhccCcccCC
Q 015283 236 SVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLK-------------------RLARPMYSNP 295 (410)
Q Consensus 236 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~ 295 (410)
+...+.++-+++..|.++. ||- .+++++ .+...++....+. ...+..-+++
T Consensus 214 -----Lh~~gaDfaigcsyKYLNgGPGa-pa~l~v---~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~ 284 (407)
T COG3844 214 -----LHAAGADFAIGCSYKYLNGGPGA-PAGLFV---APRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQ 284 (407)
T ss_pred -----ecccCCCeeeeeeceeccCCCCC-ceeEEe---ccccccccccccccccCCCCcchhhhccCcCccccceeeCCc
Confidence 1223456778888888732 443 344443 2222222211111 1111112234
Q ss_pred ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC-----cceeeec-CCCHHHHH
Q 015283 296 PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-----IGMFSFT-GLNKAQSD 369 (410)
Q Consensus 296 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-----~~~~~~~-~~~~~~~~ 369 (410)
+.++..++...|+-.. .-.+.+.|++--....++.+.++ ..-...++....|. ++...+. +.....++
T Consensus 285 ~V~s~aal~~aLDifa-----~~~i~~lR~kSlaLTd~fieLvE-a~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~q 358 (407)
T COG3844 285 PVLSLAALEGALDIFA-----DVDITELRKKSLALTDYFIELVE-ARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQ 358 (407)
T ss_pred chhhhHHHhhhhhhhh-----hcCHHHHHHhhhHHHHHHHHHHH-hccccCCcEEeccchhhhccceeeEecCcHHHHHH
Confidence 4544444433333211 11145667776667777777665 33111123333331 2222221 21234455
Q ss_pred HhhhcCcEEEc--CCC--eEEecC--CCcccHHHHHHHHHHHhhhc
Q 015283 370 NMTNKWHVYMT--KDG--RISLAG--LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 370 ~ll~~~gi~v~--~~g--Ris~~~--~~~~~i~~~~~~l~~~l~~~ 409 (410)
.|.+ +||... +.+ ||.++. .+-.|+=.+++.|.+++.+.
T Consensus 359 aLi~-rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 359 ALID-RGVIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HHHH-cCccccccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 5655 699863 333 988664 37789999999999998764
No 380
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.65 E-value=8e-06 Score=75.29 Aligned_cols=317 Identities=12% Similarity=0.116 Sum_probs=164.2
Q ss_pred eeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----Cccc----HHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 39 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGL----AAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 39 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
++.|.| ++ ++|+.+.+-+.+ ++.+.+.|+| .+|. .++...++++ .|.++. |-.+ .-
T Consensus 80 iG~GyY----~~-~~P~vI~rnile--~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL----TGm~VA--NASm--~D 144 (450)
T COG0403 80 IGAGYY----DT-YTPPVILRNILE--NPEWYTAYTPYQPEISQGRLEALFEFQTLVADL----TGLDVA--NASM--LD 144 (450)
T ss_pred ccCccc----CC-cCcHHHHHHhhc--CccccccCCCCchhhhhHHHHHHHHHHHHHHHH----hCCCcc--cchh--hh
Confidence 577777 33 346666644433 2345566766 2232 2334444444 344433 2223 46
Q ss_pred ChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhh----CCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEE
Q 015283 110 SGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL 184 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~i 184 (410)
++|.+-+.+....+.-. +..+++++.-+|+.+.+.++. .|.+++.++. + |++++++. .. ..+..+
T Consensus 145 eaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~---~----d~~~l~~~-~~--~~~~gv 214 (450)
T COG0403 145 EATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA---D----DLDDLESA-DD--GDVFGV 214 (450)
T ss_pred hHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc---c----hhhhhhhc-cc--cCeEEE
Confidence 67777777743333333 358999999999999887773 3444444443 1 66777776 32 245555
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc---ccccC
Q 015283 185 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN---LGLYA 261 (410)
Q Consensus 185 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~---~~~~G 261 (410)
++ ++|...-....+++++.+.++++|.++++=.==..++ +.....+.+-+|++++.... +|..|
T Consensus 215 ~v---QyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~----------LL~pPGe~GADIvvG~~QrfGvPmgfGG 281 (450)
T COG0403 215 LV---QYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALG----------LLKPPGEFGADIVVGSAQRFGVPMGFGG 281 (450)
T ss_pred EE---ecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhh----------ccCCccccCCceEEecCcccCCCcCCCC
Confidence 54 4554332346779999999999988766421101111 11111244567777776553 45556
Q ss_pred CCcceEEEEeCCchhHHHHHH--------------------HHHhhccC--cccC-CChhHHHHH-HHHhCChhhHHHHH
Q 015283 262 ERIGAMNVVCSSSDLAARVKS--------------------QLKRLARP--MYSN-PPVHGARIV-ANVVGNPALFDEWK 317 (410)
Q Consensus 262 ~r~G~l~~~~~~~~~~~~~~~--------------------~~~~~~~~--~~~~-~~~~~~~~a-~~~l~~~~~~~~~~ 317 (410)
-..||..+ .++...++-. .-++.++. .+|| ++..+..+. +.+.. .+. -.
T Consensus 282 Phag~fA~---~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~--~~h--Gp 354 (450)
T COG0403 282 PHAGYFAV---KDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYA--VYH--GP 354 (450)
T ss_pred cceeeeeE---hHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHH--HHh--Ch
Confidence 66778644 4443222110 00111111 2232 112111111 11110 000 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceee--ecCCCHHHHHHhhh---cCcEEEcC--CCeEEecC-
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS--FTGLNKAQSDNMTN---KWHVYMTK--DGRISLAG- 389 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~---~~gi~v~~--~gRis~~~- 389 (410)
+.++++.++..++..++.++|+ +.+. .+++.. ..+|- .+.+..+....+++ ..|+-++. ..++.++.
T Consensus 355 ~GLk~iA~r~~~~a~~la~~L~-~~~~--g~~~~~--~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~t 429 (450)
T COG0403 355 QGLKEIAERIHRLAAYLAAGLK-EIGA--GVELVF--DHFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDADTVLIALT 429 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcCC--ceEecc--ccceeeEEEecchhHHHHHHHHHHhcCCceeeecCCceEEEee
Confidence 5578999999999999999998 7762 122221 24442 22333233333333 23555543 22444442
Q ss_pred --CCcccHHHHHHHHHHH
Q 015283 390 --LSLAKCEYLADAIIDS 405 (410)
Q Consensus 390 --~~~~~i~~~~~~l~~~ 405 (410)
.++++++.+++.+...
T Consensus 430 Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 430 ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred cccCHHHHHHHHHHHhhh
Confidence 2567888888777654
No 381
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.65 E-value=4.8e-07 Score=79.08 Aligned_cols=195 Identities=18% Similarity=0.212 Sum_probs=124.2
Q ss_pred cHHHHHHHHHhhccC-C---CccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 54 LDVVKKAENLMLERG-E---NKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~-~---~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
..+|.+++++.--.. + ...|+ ..-|.+-|.+-.|+.+.. +..++=++..+||+|+..+ ++..++||
T Consensus 37 q~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~a-------E~a~VRpq~isGTHAI~~a--Lfg~LRpg 107 (416)
T COG4100 37 QKKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGA-------EAALVRPQIISGTHAIACA--LFGILRPG 107 (416)
T ss_pred HHHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhcc-------ccceeeeeeecchhHHHHH--HHhccCCC
Confidence 356666665543221 1 12332 123444555555555422 2344446678999999998 77889999
Q ss_pred CEEEEcC-CCCcchhhh----------hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC---
Q 015283 129 AKVLISS-PTWGNHKNI----------FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG--- 194 (410)
Q Consensus 129 d~Vl~~~-p~y~~~~~~----------~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG--- 194 (410)
|+.+... .-|....+. +...|...+.+|+ ..++++|++.++..++. +++++.+ +-.+|
T Consensus 108 Dell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~L--t~~gkiD~~~v~~~i~~---~tkli~I---QRS~GY~~ 179 (416)
T COG4100 108 DELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPL--TADGKIDIQAVKTAISD---RTKLIGI---QRSKGYAW 179 (416)
T ss_pred CeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeeccc--ccCCcccHHHHHHhcCc---cceEEEE---EeccCcCC
Confidence 9988654 334433332 3345666667777 34678999999999986 6776663 34444
Q ss_pred -CCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC-C-cceEEE
Q 015283 195 -IDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-R-IGAMNV 269 (410)
Q Consensus 195 -~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r-~G~l~~ 269 (410)
-.++.+++++++++.++ .++++++|++|..|... .++... ..++..+|+-|.-| .|+ . -||+
T Consensus 180 RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-~EPt~v---------GaDliAGSLIKNpG-GgiaktGGYi-- 246 (416)
T COG4100 180 RPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-KEPTHV---------GADLIAGSLIKNPG-GGIAKTGGYI-- 246 (416)
T ss_pred CCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-cCcccc---------chhhhccceeeCCC-Cceeecccee--
Confidence 34689999999999986 58999999999999854 222222 34677889999755 232 1 1674
Q ss_pred EeCCchhHHH
Q 015283 270 VCSSSDLAAR 279 (410)
Q Consensus 270 ~~~~~~~~~~ 279 (410)
++.++++++
T Consensus 247 -aGk~~~ve~ 255 (416)
T COG4100 247 -AGKAELVEA 255 (416)
T ss_pred -echHHHHHh
Confidence 346675554
No 382
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.64 E-value=2.9e-06 Score=87.52 Aligned_cols=308 Identities=13% Similarity=0.133 Sum_probs=161.5
Q ss_pred eeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-----CcccH----HHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 40 GVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLA----AFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 40 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~----~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
+.|.| ++ ..|+.+.+.+.+. .++.+.|+| .+|.. ++++.++++ .|.+ ..|..+ ..+
T Consensus 70 g~G~y----~~-~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eL----tGm~--~aNaSl--~d~ 134 (939)
T TIGR00461 70 GMGYY----GT-ILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDL----TGLP--VANASL--LDE 134 (939)
T ss_pred CCCcC----CC-cCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHH----HCCC--hhhhhc--cch
Confidence 56666 32 2367777555442 233355554 23433 444555555 3332 345555 677
Q ss_pred hhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhh----hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283 111 GTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 185 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii 185 (410)
+|.+.+.+....+.-. ++++|++++-.|+.+...++ ..|.+++.++ ++++++.+ .+..++
T Consensus 135 atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~-----~~~~v~ 199 (939)
T TIGR00461 135 GTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV-----DVFGCL 199 (939)
T ss_pred hhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC-----CEEEEE
Confidence 7877776633222222 34899999999998886665 5566665553 34454433 244555
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc----cC
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL----YA 261 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G 261 (410)
+.+| |-+|. .+++++|+++++++|.+++++.--..+..- .+ ..+.+-+|++++ +|.||. .|
T Consensus 200 ~q~P-n~~G~---ied~~~i~~~~h~~gal~~~~ad~~al~ll---~~-------Pge~GaDi~vg~-~q~fg~p~g~GG 264 (939)
T TIGR00461 200 LQYP-ATDGS---ILDYKQLIDALHSHKSLVSVAADLMALTLL---TP-------PGHYGADIVLGS-SQRFGVPMGYGG 264 (939)
T ss_pred EECC-CCCeE---EecHHHHHHHHHHcCCEEEEEechHHhCCc---CC-------HHHcCCcEEeeC-CCccCCCCCCCC
Confidence 4444 45688 457899999999999999985443333311 10 122234555544 444433 34
Q ss_pred CCcceEEEEeCCchhHHHHHHHHH--------------------hhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283 262 ERIGAMNVVCSSSDLAARVKSQLK--------------------RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 321 (410)
Q Consensus 262 ~r~G~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~ 321 (410)
-..|++.+ .+++.+++-..+- +.++....+++.+...++.....---..-+-.+.++
T Consensus 265 P~aG~~a~---~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~ 341 (939)
T TIGR00461 265 PHAAFFAV---KDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLK 341 (939)
T ss_pred Cceeeeee---cHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHH
Confidence 44677643 4443332211110 111111111122211111110000000000134567
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCccee--eecCC---CHH-HHHHhhhcCcEEEcCC--C--eEEecC-C
Q 015283 322 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGL---NKA-QSDNMTNKWHVYMTKD--G--RISLAG-L 390 (410)
Q Consensus 322 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~--~~~~~---~~~-~~~~ll~~~gi~v~~~--g--Ris~~~-~ 390 (410)
++.++...+..++.+.|. +.|+ +...+ .+| +.+.+ +.+ ..+++++ .||.+... + ++|+.- .
T Consensus 342 ~iA~~~~~~a~~l~~~L~-~~G~----~~~~~--~fF~~~~v~~~~~~~~~i~~~~~~-~gi~l~~~~~~~i~~s~~E~~ 413 (939)
T TIGR00461 342 NIARRIHSLTSILANGLE-NDPH----ELINK--TWFDTLTVKVGNGISSELLKAAEE-FNINLRAVDTTTVGIALDETT 413 (939)
T ss_pred HHHHHHHHHHHHHHHHHH-hCCC----cccCC--CccceEEEEeCCCCHHHHHHHHHH-CCCeeeecCCCEEEEEeecCC
Confidence 888899999999999999 8873 43322 334 11222 334 4555655 69987643 2 666553 3
Q ss_pred CcccHHHHHHHHH
Q 015283 391 SLAKCEYLADAII 403 (410)
Q Consensus 391 ~~~~i~~~~~~l~ 403 (410)
|+++++.+++.+.
T Consensus 414 t~~di~~l~~~~~ 426 (939)
T TIGR00461 414 TKADVENLLKVFD 426 (939)
T ss_pred CHHHHHHHHHHhc
Confidence 7889999999884
No 383
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.58 E-value=2.8e-06 Score=80.30 Aligned_cols=252 Identities=14% Similarity=0.120 Sum_probs=121.5
Q ss_pred cCChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhh----hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283 108 GLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 182 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 182 (410)
-.+++..-+.+....+... ..++|+++...++.+...++ ..|.+++.++..+ +...| . +.+.
T Consensus 133 yd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~--~~~~d--------~---~~~a 199 (429)
T PF02347_consen 133 YDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDE--DGTTD--------D---DDTA 199 (429)
T ss_dssp SSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBT--TCSB---------S---TTEE
T ss_pred CChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccc--cCCcc--------c---cCeE
Confidence 4566766666543344333 34699999999999887444 5677777777632 22233 2 4677
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc---
Q 015283 183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL--- 259 (410)
Q Consensus 183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~--- 259 (410)
.+++.+|+ -.|. .+++++|+++++++|.++++ .+ -..... .+.. ..+.+-+|++++ +|.||.
T Consensus 200 ~v~vq~Pn-~~G~---~ed~~~i~~~~h~~gal~~~-~a-d~~aL~-------~l~~-Pge~GADI~vg~-~Q~fg~p~~ 264 (429)
T PF02347_consen 200 AVMVQNPN-TFGV---FEDIKEIADIAHAAGALVIV-GA-DPNALG-------GLKS-PGEYGADIVVGE-HQTFGIPMG 264 (429)
T ss_dssp EEEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CG-GCCGCC-------TC---GGGGT-SEEEEC-CTTTT---C
T ss_pred EEEeecCC-CCce---EeeHHHHHHHHHHcCCEEEE-ec-CHHHHh-------CcCC-hhhcCccEEeeC-CCCCcccCC
Confidence 77766665 4577 56699999999999998876 44 222221 1111 122234555666 777744
Q ss_pred -cCCCcceEEEEeCCchhHHHHHHHHH---------------------hhcc-CcccC-CChhHH---HHHHHHhCChhh
Q 015283 260 -YAERIGAMNVVCSSSDLAARVKSQLK---------------------RLAR-PMYSN-PPVHGA---RIVANVVGNPAL 312 (410)
Q Consensus 260 -~G~r~G~l~~~~~~~~~~~~~~~~~~---------------------~~~~-~~~~~-~~~~~~---~~a~~~l~~~~~ 312 (410)
.|-..|++.+ .+++..++-.++- +..+ ..+++ ++..+. .++..+.--+
T Consensus 265 ~GGP~~G~~a~---~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G-- 339 (429)
T PF02347_consen 265 FGGPGAGFFAV---REDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLG-- 339 (429)
T ss_dssp CC-S--EEEEE----GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHH--
T ss_pred CCCCCeeeEEE---hhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhC--
Confidence 3555677643 5554333221110 0001 11221 111111 2222221111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec--CCCHHHHHHhhhc---CcEEEcCC--CeE
Q 015283 313 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GLNKAQSDNMTNK---WHVYMTKD--GRI 385 (410)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~---~gi~v~~~--gRi 385 (410)
.+.+++..++...+..++.+.|+ +... ..+. ...+|-++ ........+++++ .|+....- +.+
T Consensus 340 ----~~GL~~iA~~~~~~A~yl~~~L~-~~~~---~~~~--~~~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~~~~~~~~ 409 (429)
T PF02347_consen 340 ----PEGLREIAERIHLNAHYLAERLK-KIYG---LPFD--NPFFFEFVVVFSKDKEVEELLKRGIEGGLNLRYPDDGAL 409 (429)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHC-CTTB---ECSS--SSSBSSEEEEESS-HHHHHHHHTT----EEEGGG-SSEE
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHH-HhcC---cccC--CCCceeeeeecCCcHHHHHHHHHHHhcCCCccccCCCeE
Confidence 46678999999999999999998 7521 2222 22333221 2222333334432 46554322 244
Q ss_pred EecC---CCcccHHHHHHHH
Q 015283 386 SLAG---LSLAKCEYLADAI 402 (410)
Q Consensus 386 s~~~---~~~~~i~~~~~~l 402 (410)
.++. .++++|+.+++.+
T Consensus 410 li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 410 LICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EEE--TT--HHHHHHHHH--
T ss_pred EEEccCCCCHHHHHHHHhcC
Confidence 4442 3667788777653
No 384
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.57 E-value=2.3e-06 Score=78.87 Aligned_cols=146 Identities=14% Similarity=0.034 Sum_probs=85.0
Q ss_pred CCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHH
Q 015283 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEK 204 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~ 204 (410)
.++.|+.+.-..-.-...++.+|.+++.||... ++....|.+.+++.+++.+....+.+++++ +++.....| +++
T Consensus 100 ~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvlttt---scfapr~~D~i~~ 176 (389)
T PF05889_consen 100 KAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTT---SCFAPRLPDDIEE 176 (389)
T ss_dssp T--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEES---STTTTB----HHH
T ss_pred CCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEec---CccCCCCCccHHH
Confidence 678888877544333345667899999998643 344456788888888765445455554433 333333444 999
Q ss_pred HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH
Q 015283 205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS 282 (410)
Q Consensus 205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 282 (410)
|+++|++||+..++..||.--.. .-...+......+.-.+++.|.-|.|-.| . |-.++.+.++..+..+.+
T Consensus 177 IakiC~~~~IPhlvNnAYgvQ~~----~~~~~i~~a~~~GRvda~vqS~dkNF~VP-v--Ggai~As~~~~~i~~vs~ 247 (389)
T PF05889_consen 177 IAKICKEYDIPHLVNNAYGVQSS----KCMHLIQQAWRVGRVDAFVQSTDKNFMVP-V--GGAIMASFDPSGILAVSK 247 (389)
T ss_dssp HHHHHHHHT--EEEEGTTTTT-H----HHHHHHHHHHHHSTCSEEEEEHHHHHCEE-S--SHEEEEESSHHHHHHHHH
T ss_pred HHHHHHHcCCceEEccchhhhHH----HHHHHHHHHHhcCCcceeeeecCCCEEec-C--CCcEEEecCHHHHHHHHH
Confidence 99999999999999999864221 00112222333445667899999999533 2 333335667776555544
No 385
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.39 E-value=1e-05 Score=72.55 Aligned_cols=211 Identities=11% Similarity=0.087 Sum_probs=119.5
Q ss_pred ChhhHHHHHhcC--CC-CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH-
Q 015283 166 DFEGMIADIKAA--PG-GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF- 240 (410)
Q Consensus 166 d~~~l~~~i~~~--~~-~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~- 240 (410)
.+++++++|.+. ++ ..+.+++...+...|-. .|++-.+.|.++|++|++.+|+||+..+.+.. .+.|....+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaT---Gk~WaHehw~ 330 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGAT---GKFWAHEHWN 330 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCcc---CceeeehhcC
Confidence 356677777553 22 33444444556666644 47888999999999999999999998877643 345544433
Q ss_pred hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH--HHHHhCChhhHHHHHH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI--VANVVGNPALFDEWKA 318 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~l~~~~~~~~~~~ 318 (410)
++...+++ +|||-|-.. ||- . +++ ++..-...++++|.+-|.-...+ +...+.++
T Consensus 331 l~~PpD~v---TFSKK~q~g----Gff-h---~~~----frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~-------- 387 (484)
T KOG1405|consen 331 LDSPPDVV---TFSKKFQTG----GFF-H---DEE----FRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKRE-------- 387 (484)
T ss_pred CCCCccce---ehhhhhhcC----ccc-c---Ccc----cCCCchHHHhhhhcCChHHHHHHHHHHHHHhHH--------
Confidence 22333555 799998644 442 1 444 32211122344676544433222 23333333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCC--CCCcccccCCcceeeecCC-C---HHHHHHhhhcCcEEEcCCC----eE--E
Q 015283 319 EMEMMAGRIKNVRQKLFDSLSAKDKS--GKDWSFILRQIGMFSFTGL-N---KAQSDNMTNKWHVYMTKDG----RI--S 386 (410)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~l~~~~g~--~~~~~~~~~~~~~~~~~~~-~---~~~~~~ll~~~gi~v~~~g----Ri--s 386 (410)
...+..++..+.|.++|. ++.. ++.+.-.... |.|.-.++ + .+.+...++-.||.+-.+| |+ +
T Consensus 388 ---~Ll~n~~~vG~~l~~gL~-~Lq~~~p~~~~~~RGr-GTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPs 462 (484)
T KOG1405|consen 388 ---DLLNNVAHVGKALLKGLL-ELQAKYPGKINNLRGR-GTFIAWDCPSGSIRDKLILIARLNGVNLGGCGDKSIRFRPS 462 (484)
T ss_pred ---HHHHHHHHHHHHHHHHHH-HHHHhCchhhhccccc-ceEEEEeCCChHHHHHHHHHHHHcCceecccccceeeeccc
Confidence 233444555556666555 4421 1222223333 44533344 2 3344444455799988887 55 4
Q ss_pred ecCCCcccHHHHHHHHHHHhhh
Q 015283 387 LAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 387 ~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+.. .+...+-+++++.++++.
T Consensus 463 Lvf-~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 463 LVF-RKHHADIFLDIFDKILAG 483 (484)
T ss_pred eee-hhhhHHHHHHHHHHHhcc
Confidence 433 777889999999998865
No 386
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.38 E-value=2.8e-07 Score=84.16 Aligned_cols=209 Identities=18% Similarity=0.168 Sum_probs=39.5
Q ss_pred cCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH-HHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283 46 TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK-VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER 124 (410)
Q Consensus 46 ~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~-aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~ 124 (410)
++-|-.++++++.+++.+.........|.-..|-.--|. .+.+++....| .+.-++ +++...|+.++ ++.
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltg----AeaA~V--vNnnaAAv~L~---l~~ 81 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTG----AEAALV--VNNNAAAVLLA---LNT 81 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccc--ccccccccccc---ccc
Confidence 344556667888888877654433334432222111111 11222222222 244444 56666666664 455
Q ss_pred hCCCCEEEEcCC---CCc---chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC--CCC
Q 015283 125 YFPGAKVLISSP---TWG---NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT--GID 196 (410)
Q Consensus 125 ~~~gd~Vl~~~p---~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt--G~~ 196 (410)
+.+|.+|+++.. .++ ...++++..|+++++|-..+ .-.++++++.|++ +|.+++-.+++|-. |+.
T Consensus 82 la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e---~Ta~ll~Vh~Sn~~i~GFt 154 (367)
T PF03841_consen 82 LAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITE---NTAALLKVHTSNFRIQGFT 154 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccc----ccccccccccccc---ccccccccccccccccccc
Confidence 667888888763 222 24567788999999986632 2357788888886 77777766666663 442
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCC-------CCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQG-------FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
-.. .++++++++++|++++|+|-. ++ ++.. +.+.+..+.. ..-+++++|=.|.+| |--.|.+++
T Consensus 155 ~~~-~~~el~~la~~~~lp~i~Dlg-sG~l~dl~~~gl~----~Ep~v~~~~~-~GaDlV~fSGdKlLG--GPQaGiI~G 225 (367)
T PF03841_consen 155 GEV-SLEELAELAKEHGLPVIVDLG-SGLLVDLSPYGLP----DEPTVQEYLA-AGADLVTFSGDKLLG--GPQAGIIVG 225 (367)
T ss_dssp -------HHHHHHHHHT--EEEE-T-THHHHHHHTT--------------CCC-CT-SEEEEETTSSSS--S-S-EEEEE
T ss_pred ccc-cHHHHHHHHhhcCCcEEEECC-CCCCcCcccccCc----cccHHHHHhh-cCCCEEEEECCCcCC--CCCeEEEEe
Confidence 222 478888889999999999998 41 1211 1123323332 346788889999987 445688655
Q ss_pred EeCCchhHHHHHH
Q 015283 270 VCSSSDLAARVKS 282 (410)
Q Consensus 270 ~~~~~~~~~~~~~ 282 (410)
.+++++++++
T Consensus 226 ---kk~lI~~lk~ 235 (367)
T PF03841_consen 226 ---KKELIEKLKK 235 (367)
T ss_dssp ---EHHHHHHHHH
T ss_pred ---CHHHHHHHhh
Confidence 8898888765
No 387
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.05 E-value=0.00035 Score=64.55 Aligned_cols=150 Identities=14% Similarity=0.038 Sum_probs=90.3
Q ss_pred cCChhhHHHHHHHHHHHhC-CC----------CEEEE-cCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHH
Q 015283 108 GLSGTGSLRLAAALIERYF-PG----------AKVLI-SSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~-~g----------d~Vl~-~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~ 172 (410)
.+||+-++.-+..+.+.-. |+ +-|+. ++-++.+....+..+|. .++-|++ ...+++++++|++
T Consensus 165 ~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~ 242 (510)
T KOG0629|consen 165 APGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKMIPDDLEK 242 (510)
T ss_pred cCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecc--cccCccchHHHHH
Confidence 5777766665544443211 33 34444 44577777777777773 5666666 4567899999999
Q ss_pred HHhcCCCC---cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 173 DIKAAPGG---SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 173 ~i~~~~~~---~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
.|...+.+ +.++-.+.-....|. -+++..++++|++|++|+.+|.||.+-..- ....-. .+.....-.-+
T Consensus 243 kile~k~kg~~Pf~vnaTaGTTV~GA---FDdL~~iadiC~k~~lWmHvDAAwGGglLm--S~k~R~--kl~Giera~Sv 315 (510)
T KOG0629|consen 243 KILEAKAKGGVPFFVNATAGTTVLGA---FDDLNGIADICEKHKLWMHVDAAWGGGLLM--SRKHRH--KLTGIERANSV 315 (510)
T ss_pred HHHHHHhcCCCCeEEEecCCceeeec---cCcHHHHHHHHHhcCEEEEeeccccccccc--ChhhHh--hccCccccCce
Confidence 98764333 333332222333354 778999999999999999999998773321 111111 22222222345
Q ss_pred EecccccccccCCCcceE
Q 015283 250 AQSYSKNLGLYAERIGAM 267 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l 267 (410)
.++.+|.+|. .+-.+..
T Consensus 316 twnpHK~~ga-plqCsa~ 332 (510)
T KOG0629|consen 316 TWNPHKLMGA-PLQCSAF 332 (510)
T ss_pred eecHHHhhcC-cchhhHH
Confidence 5678888884 4555554
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.97 E-value=0.0006 Score=62.13 Aligned_cols=168 Identities=21% Similarity=0.183 Sum_probs=97.6
Q ss_pred CcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH-H-------H
Q 015283 214 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ-L-------K 285 (410)
Q Consensus 214 ~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~-~-------~ 285 (410)
.++|.|.. ++....+ .|.. .-.++-.|.=|.+|..| ++.+++ ++++++++... + .
T Consensus 171 ~~~v~D~S-S~ilsr~--iDvs---------k~dviyagaQKnlGpaG--ltvvIv---r~~~l~r~~~~~~P~if~y~~ 233 (365)
T COG1932 171 GLLVADAS-SAILSRP--IDVS---------KYDVIYAGAQKNLGPAG--LTVVIV---RPDLLERAESYTLPSIFDYLT 233 (365)
T ss_pred ceEEEecc-cHHhcCC--CChh---------HcceEEEehhhccCccc--eEEEEE---cHHHHhcccccCCchHhhchh
Confidence 77888888 4443221 1111 13455678899999888 566654 77777765442 1 1
Q ss_pred h-hccCcccCCChhHHHHHHH---HhC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-cccccCCcceee
Q 015283 286 R-LARPMYSNPPVHGARIVAN---VVG-NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFS 359 (410)
Q Consensus 286 ~-~~~~~~~~~~~~~~~~a~~---~l~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~ 359 (410)
. ...+++.+||..+...+.. ++. .+. ++.+.++.+++.+.|.+.+. +-+.-.. ... ...+-+-+
T Consensus 234 ~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG--------l~~~~~rn~~ka~~LY~~id-~s~fy~~~v~~-~~RS~mnV 303 (365)
T COG1932 234 HADNGSMYNTPPTFAWYLLGLVFKWLKSQGG--------LEALEARNQAKAQLLYDWID-KSDFYRNLVAK-ANRSRMNV 303 (365)
T ss_pred hhccCCccCCcHHHHHHHHHHHHHHHHHcCC--------HHHHHHHHHHHHHHHHHHHH-hCCccccccch-hhccceeE
Confidence 1 1223444666665554422 222 222 46788888999999999887 5553111 111 11111122
Q ss_pred ecC-----CCHHHHHHhhhcCcEEEcCC-----C-eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 360 FTG-----LNKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 360 ~~~-----~~~~~~~~ll~~~gi~v~~~-----g-Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+. ++..++.++.+ +|+....| | |+++.+ ++.++++.+++-++++.++.
T Consensus 304 ~f~~~~~~ld~~fv~eae~-~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 304 TFTLVDAELDKGFVAEAEA-AGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred EEEcCcHHHHHHHHHHHHH-cCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 222 23445555555 57766554 4 999665 68999999999999887653
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.97 E-value=0.0013 Score=68.18 Aligned_cols=307 Identities=12% Similarity=0.064 Sum_probs=150.3
Q ss_pred eeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCC-----ccc----HHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 38 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-----EGL----AAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 38 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----~g~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
=++.|.+ ++ ++|..+.+.+.+. ..+.+.|+|- +|. -++...++++ .|.++. |-.+ -
T Consensus 83 fiG~G~y----~~-~~P~vi~~~i~~~--~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~L----tGm~va--NASl--~ 147 (954)
T PRK12566 83 LIGMGYH----GT-VTPTVILRNVLEN--PGWYTAYTPYQPEIAQGRLEALLNFQQMTIDL----TGLDLA--NASL--L 147 (954)
T ss_pred ccccccc----CC-cCcHHHHHHHHhC--chhhhcCCCCCchhhhHHHHHHHHHHHHHHHH----hCchhh--hhhh--c
Confidence 4566766 33 2355554544442 2444666552 243 3444445554 333322 2222 3
Q ss_pred CChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283 109 LSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 187 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~ 187 (410)
-++|.+-+.+....+..+ +..+|++++-.++.+...++.+- +...+++. .+++++.+.. ....+++-
T Consensus 148 D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~-~~~g~~i~--------~~~~~~~~~~---~~~~v~vq 215 (954)
T PRK12566 148 DEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRA-EGFGFELV--------VDAVDNLAAH---AVFGALLQ 215 (954)
T ss_pred cchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhh-hcCCcEEE--------EcchhhcCCC---CEEEEEEE
Confidence 466766665532222222 24689999999999887776321 11111210 1333333332 45566544
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec---ccccccccCCCc
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS---YSKNLGLYAERI 264 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S---~sK~~~~~G~r~ 264 (410)
+|+ -.|. .+++++|+++++++|.++| +.+. .+.. .+..-..+.+-+|++++ |+=-+|..|--.
T Consensus 216 ~P~-~~G~---i~d~~~i~~~~h~~gal~~-~~~d-~laL--------~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~a 281 (954)
T PRK12566 216 YPD-THGE---IRDLRPLIDQLHGQQALAC-VAAD-LLSL--------LVLTPPGELGADVVLGSTQRFGVPMGYGGPHA 281 (954)
T ss_pred CCC-CceE---EccHHHHHHHHHHcCCEEE-EEeC-HHHH--------hCCCChhhcCCcEEeeCCCcCCCCCCCCCCCe
Confidence 443 4577 4678899999999998755 4441 1111 00011123345666653 344445556667
Q ss_pred ceEEEEeCCchhHHHHHHHH--------------------HhhccC--cccC-CChhHHHH---HHHHhCChhhHHHHHH
Q 015283 265 GAMNVVCSSSDLAARVKSQL--------------------KRLARP--MYSN-PPVHGARI---VANVVGNPALFDEWKA 318 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~--------------------~~~~~~--~~~~-~~~~~~~~---a~~~l~~~~~~~~~~~ 318 (410)
|++.+ .++...++-.++ .+.++. .+++ +...+..+ +.++.-.+ .+
T Consensus 282 g~~a~---~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~G------p~ 352 (954)
T PRK12566 282 AYFAC---RDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHG------PE 352 (954)
T ss_pred eeeee---hHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhC------hH
Confidence 88643 444333221100 111111 1222 11111111 11111111 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeee--cCC--CH-HHHHHhhhcCcEEEc--CCCeEEecC--
Q 015283 319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--TGL--NK-AQSDNMTNKWHVYMT--KDGRISLAG-- 389 (410)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--~~~--~~-~~~~~ll~~~gi~v~--~~gRis~~~-- 389 (410)
.++++.++...+..++.+.|. +.|+ +... ..+|-. +.+ .. +...+.++ .||-++ ..++++++-
T Consensus 353 Gl~~ia~~~~~~a~~l~~~l~-~~g~----~~~~--~~fF~~~~v~~~~~~~~~~~~a~~-~~~n~r~~~~~~~~~s~de 424 (954)
T PRK12566 353 GLKRIAQRVHRLTAILAAGLE-AKGI----KRLN--RHFFDTLTLEVGGAQAAIIESAEA-ARINLRILGRGRLGVSLDE 424 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcCC----cccc--CCccceEEEEccCCHHHHHHHHHH-CCCeeEEeCCCeEEEEeCC
Confidence 567888899999999999999 8773 3321 144421 222 23 33444444 466554 344555442
Q ss_pred -CCcccHHHHHHHH
Q 015283 390 -LSLAKCEYLADAI 402 (410)
Q Consensus 390 -~~~~~i~~~~~~l 402 (410)
.+.+++..+++.+
T Consensus 425 ~~~~~~~~~~~~~f 438 (954)
T PRK12566 425 TCDEATVARLFDIF 438 (954)
T ss_pred CCCHHHHHHHHHHh
Confidence 3667777777776
No 390
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00084 Score=62.74 Aligned_cols=90 Identities=17% Similarity=0.097 Sum_probs=65.1
Q ss_pred EcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283 133 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 209 (410)
Q Consensus 133 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~ 209 (410)
.++-.+.+....+...|.+.+.++. +.++.++.+.|.+++++. +-.+.+++ .+ --|...-+-+++.+|..+|
T Consensus 187 ~SDqahssveka~~i~~VklR~l~t--d~n~~mr~~~L~~AIe~D~arGlIPf~v~-at--~GTT~~ca~D~l~elg~Vc 261 (511)
T KOG0628|consen 187 CSDQAHSSVEKACLIAGVKLRALPT--DENFGMRGDTLRKAIEEDIARGLIPFFVC-AT--LGTTSSCAFDELEELGPVC 261 (511)
T ss_pred ecCcccchHHHhHhhcceeEEEeec--ccCcCCCHHHHHHHHHHHHhCCCccEEEE-Ee--ecCccccccccHHHhcchh
Confidence 4556667777777788888888887 348999999999888762 22233333 22 2222223467899999999
Q ss_pred HHcCCcccccccCCCCCC
Q 015283 210 QEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 210 ~~~~~~li~Deay~~~~~ 227 (410)
+++|+|+.+|.+|.+..+
T Consensus 262 ~~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 262 REEGLWLHVDAAYAGSAF 279 (511)
T ss_pred hhcCEEEEeehhhccccc
Confidence 999999999999997664
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.76 E-value=0.043 Score=47.85 Aligned_cols=107 Identities=19% Similarity=0.113 Sum_probs=67.4
Q ss_pred hhCCCCccce-eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHHcCCcccccccC
Q 015283 146 NDARVPWSEY-RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG--IDPTPEQWEKIADVIQEKNHIPFFDVAY 222 (410)
Q Consensus 146 ~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG--~~~~~~~l~~i~~~~~~~~~~li~Deay 222 (410)
...|.+++.+ +..+.+.-.-|++.+++.+.+.++...+-+. ..|. ..-+++.+++|+.+|..|++.=++..+|
T Consensus 121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~----sttscfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIH----STTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEe----ecccccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 3578877766 3444454566888888888875554444332 2222 2234678999999999999999999997
Q ss_pred CCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283 223 QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 260 (410)
.--... ....+.....-+.-+.++.|+-|.|-.|
T Consensus 197 glqsee----~i~~iaa~~~~grida~vqsldknf~vp 230 (432)
T KOG3843|consen 197 GLQSEE----CIHKIAAAAECGRIDAFVQSLDKNFMVP 230 (432)
T ss_pred ccchHH----HHHHHHHHhhhccHHHHHHHhhhcceee
Confidence 643311 1112222222334556778999998755
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.15 E-value=0.047 Score=53.57 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=96.2
Q ss_pred CccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh--CCCC----EEEEcCCCCcc
Q 015283 70 NKEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPGA----KVLISSPTWGN 140 (410)
Q Consensus 70 ~~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--~~gd----~Vl~~~p~y~~ 140 (410)
++.|.| .+|+.++-+.+-+++..-.| -+++.+-+-+|+++ -..-.+..+.+ ..|+ --++|-..++.
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~G-EYaGL~~IRaY~~~kge~hRnvClIPvSAHGT 642 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQG-EYAGLRVIRAYLESKGEGHRNVCLIPVSAHGT 642 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhheeec----ccceeecCCCCccc-chhhHHHHHHHHHhccCCcceeEEEeecccCC
Confidence 366766 34777777777777655444 35666633344433 22221223332 1342 44567778888
Q ss_pred hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccc
Q 015283 141 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 220 (410)
Q Consensus 141 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 220 (410)
....+..+|++++.|.+ ..++.+|..+|.+..+++.++-..++++-|+. .|+. .+.+++++++.++||--+..|.
T Consensus 643 NPASA~MagmkvvpV~~--~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDG 717 (1001)
T KOG2040|consen 643 NPASAAMAGMKVVPVGC--DANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDG 717 (1001)
T ss_pred ChhhHHhcCCEEEEeec--cCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecC
Confidence 88888899999999987 57788999999998888766666666554432 2442 4558999999999999999999
Q ss_pred cCC
Q 015283 221 AYQ 223 (410)
Q Consensus 221 ay~ 223 (410)
+-.
T Consensus 718 ANM 720 (1001)
T KOG2040|consen 718 ANM 720 (1001)
T ss_pred CCc
Confidence 843
No 393
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=95.91 E-value=1.2 Score=40.00 Aligned_cols=117 Identities=20% Similarity=0.086 Sum_probs=78.2
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHhCCC---CEEEEcCCCCcch----hhhhhhCCCCccc--eeeecC-CCcccChhh
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNH----KNIFNDARVPWSE--YRYYDP-KTVGLDFEG 169 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~~g---d~Vl~~~p~y~~~----~~~~~~~g~~~~~--v~~~~~-~~~~~d~~~ 169 (410)
.++|.+ .++=|-.++.+ ++..+.|- -+|+...-.|++- .+.++..|..+.. +...+. ....+..++
T Consensus 128 e~Evav--mNsLTvNlh~L--l~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteD 203 (465)
T KOG3846|consen 128 ENEVAV--MNSLTVNLHSL--LISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTED 203 (465)
T ss_pred chhhhh--HhhhhhHHHHH--HHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHH
Confidence 566776 55556666665 44456554 3788877676654 4455566765432 222222 234677899
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 223 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~ 223 (410)
+.+.|.++++...+++++..+.-||+.++ +.+|-..-+..|+++=.|-++.
T Consensus 204 ILd~IEkngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA 254 (465)
T KOG3846|consen 204 ILDTIEKNGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA 254 (465)
T ss_pred HHHHHHhcCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh
Confidence 99999988778888889999999999665 5556544556799988898843
No 394
>PLN02672 methionine S-methyltransferase
Probab=95.54 E-value=0.2 Score=53.55 Aligned_cols=202 Identities=14% Similarity=0.077 Sum_probs=115.9
Q ss_pred HHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCc-
Q 015283 62 NLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWG- 139 (410)
Q Consensus 62 ~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~- 139 (410)
...+.......|.|+.|...+|..|+.++...+++++++++|++ .++-..|++.+.++... +.--|.-+. .|-
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 485 (1082)
T PLN02672 411 ASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAVAIENALRLFSPRLAIVDEHLT---RWLP 485 (1082)
T ss_pred HHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHHHHHHHHHhhChHHHhhhhhhh---ccCC
Confidence 34444444477889999999999999999999999999999998 78888999887544321 100021111 111
Q ss_pred -chhhhhhhCCCC-----ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015283 140 -NHKNIFNDARVP-----WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 213 (410)
Q Consensus 140 -~~~~~~~~~g~~-----~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 213 (410)
.|...+...|.. -..+.+.+ ..- .-+.+.+++++- ++.+++.+... +-..+...++.|...+++-|
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 557 (1082)
T PLN02672 486 KKWLTSLAIENATSDSKSDDVITVIE-APR--QSDLVIELIKKL--KPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIG 557 (1082)
T ss_pred HHHHhHhhhhcccccCccCCeEEEEe-CCC--cchHHHHHHHhC--CCeEEEEeccc---hhhhhHHHHHHHHHHHHhhC
Confidence 122222222110 01111111 000 113556666663 44555543332 22334667889999999999
Q ss_pred CcccccccCC-CCCCCCCCCchhHhHHHhhc--CCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283 214 HIPFFDVAYQ-GFASGSLDNDASSVRLFATR--GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 214 ~~li~Deay~-~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
..++.|..-+ .+.. .......+..+... ..+..++.++-|.--.+-+-+.++ +.-++.+...+
T Consensus 558 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 623 (1082)
T PLN02672 558 ARLFLDISDHLELSS--LPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFV--ISENEAVLKAL 623 (1082)
T ss_pred cEEEEehhhheeecc--CCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEE--ecCcHHHHHHH
Confidence 9999999832 2222 11222233333332 235666778888766688888887 44455543333
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=94.49 E-value=1 Score=40.09 Aligned_cols=170 Identities=18% Similarity=0.213 Sum_probs=91.7
Q ss_pred HHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH------
Q 015283 210 QEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ------ 283 (410)
Q Consensus 210 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~------ 283 (410)
..++.++|.|-. +.|...+.+. ....++..+.-|.+|+.|+-+-. + .++++......
T Consensus 172 ~~~~~vlVaDmS-SnflSrpvDv-----------sk~gvi~aGAQKN~G~aG~Tvvi--v---r~dllg~~~~~tP~v~d 234 (370)
T KOG2790|consen 172 DPKGAVLVADMS-SNFLSRPVDV-----------SKFGVIFAGAQKNVGPAGVTVVI--V---RKDLLGNALDITPSVLD 234 (370)
T ss_pred CCCCceEEEecc-cchhcCCccc-----------hhcceEEeccccccCccccEEEE--E---ehhhhcccccCCccccc
Confidence 346888899988 7766543221 12356677889999988863222 2 44533322110
Q ss_pred HHhh-c-cCcccCCChhHHH----HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccc--ccCC
Q 015283 284 LKRL-A-RPMYSNPPVHGAR----IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSF--ILRQ 354 (410)
Q Consensus 284 ~~~~-~-~~~~~~~~~~~~~----~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~--~~~~ 354 (410)
++.. . .+.+.++|..+.. ....+++.+.+ ..+.+.-.++.+.+.+.+. .- |+ +.+ .+..
T Consensus 235 yk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl--------~a~e~~n~~KskllYd~iD-~s~gf---y~cpVe~~~ 302 (370)
T KOG2790|consen 235 YKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGL--------AAMEKLNQEKSKLLYDAID-NSNGF---YRCPVEPSV 302 (370)
T ss_pred eeeeccccccccCCCeeeeeehhhHHHHHHhcccH--------HHHHHHHHHHHHHHHHHHH-hcCCe---EEcccchhh
Confidence 0000 0 1122234433222 23445555543 5666777888888999887 43 42 221 1111
Q ss_pred ccee-ee--cC---CCHHHHHHhhhcCcEEEcCC-----C-eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 355 IGMF-SF--TG---LNKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 355 ~~~~-~~--~~---~~~~~~~~ll~~~gi~v~~~-----g-Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+.. +- ++ ++.+++.+..++ ++.-..| | |-|+.+ ++-++++.++.-+++..+..
T Consensus 303 RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~h 369 (370)
T KOG2790|consen 303 RSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQKKH 369 (370)
T ss_pred hhhcccceeecchHHHHHHHHHHHHh-hhhccccccccccchhhhhccccHHHHHHHHHHHHHHHHhc
Confidence 1111 11 11 234555665554 5544444 3 888775 58899999999998876643
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=91.01 E-value=19 Score=36.30 Aligned_cols=79 Identities=15% Similarity=0.232 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec----CCCHH-HHHHhhhc-CcEEEcCCCeEEec---
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT----GLNKA-QSDNMTNK-WHVYMTKDGRISLA--- 388 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~----~~~~~-~~~~ll~~-~gi~v~~~gRis~~--- 388 (410)
+.++++.+++......|..+|+ ..| .++... .+|=.+ +.+.+ ...+..++ .++.....+-|+++
T Consensus 391 ~gL~~IArrvh~~T~~l~~~l~-~ag----hel~~k--~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDE 463 (1001)
T KOG2040|consen 391 HGLKEIARRVHNLTLILAEGLK-NAG----HELQHK--PFFDTLKIRCGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDE 463 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcc----hhhccc--cccceEEEEecCcHHHHHHHHHhhcCceEEeecCceEEeecc
Confidence 4467888899999999999998 776 232211 245222 33333 45555543 34445555655544
Q ss_pred CCCcccHHHHHHHHH
Q 015283 389 GLSLAKCEYLADAII 403 (410)
Q Consensus 389 ~~~~~~i~~~~~~l~ 403 (410)
+.+++|++.++..+.
T Consensus 464 Tv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 464 TVTEKDVDDLLWVFN 478 (1001)
T ss_pred cccHHHHHHHHHHHc
Confidence 246677887776654
No 397
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=85.15 E-value=36 Score=32.52 Aligned_cols=158 Identities=10% Similarity=0.093 Sum_probs=92.1
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV 150 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~ 150 (410)
+.|......+++++++.+.+.+ +|......+. +.|.+.....+..-++.+..-+..++...+|......+....-
T Consensus 47 NdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~----i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~ 121 (388)
T COG0156 47 NDYLGLASHPELIEAAKAAIRR-YGVGAGGSRL----ISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLK 121 (388)
T ss_pred cCcccccCCHHHHHHHHHHHHH-hCCCCCCcCc----ccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcC
Confidence 6788888889999999888644 4554444554 4555555555555666666557889999999888777764332
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc---CCcccccccCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK---NHIPFFDVAYQGFAS 227 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~---~~~li~Deay~~~~~ 227 (410)
+ ..+-+.|+ ++-..+.+-++-. +...+.. .|| +.++|+++.+-+++. ..+|+.|.+|+.-+.
T Consensus 122 ~-~dli~~D~----lnHASiidG~rls--~a~~~~f--~Hn------D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGd 186 (388)
T COG0156 122 K-GDLIFSDE----LNHASIIDGIRLS--RAEVRRF--KHN------DLDHLEALLEEARENGARRKLIVTEGVFSMDGD 186 (388)
T ss_pred C-CcEEEEec----hhhhhHHHHHHhC--CCcEEEe--cCC------CHHHHHHHHHhhhccCCCceEEEEeccccCCCC
Confidence 2 11212222 2334454444331 3333333 332 256777776665544 489999999986553
Q ss_pred CCCCCchhHhHHHhhcCCcEEEEe
Q 015283 228 GSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
- .+...+..+.+.++..+++.
T Consensus 187 i---ApL~~l~~L~~ky~a~L~VD 207 (388)
T COG0156 187 I---APLPELVELAEKYGALLYVD 207 (388)
T ss_pred c---CCHHHHHHHHHHhCcEEEEE
Confidence 1 12223334445555555543
No 398
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=81.06 E-value=1.9 Score=43.46 Aligned_cols=37 Identities=16% Similarity=0.282 Sum_probs=32.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
|++..|. +++++++++-|++.||-||+|-||..|...
T Consensus 206 p~sryGt---Pedfk~fVD~aH~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 206 PTSRYGT---PEDFKALVDAAHQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred ccccCCC---HHHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence 4455555 999999999999999999999999998853
No 399
>PLN02955 8-amino-7-oxononanoate synthase
Probab=79.11 E-value=66 Score=31.72 Aligned_cols=160 Identities=12% Similarity=0.076 Sum_probs=89.6
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC--
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-- 148 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-- 148 (410)
+.|......++++++..+.+ +++|........ ..|.+.....+...++.+...+..++...+|......+...
T Consensus 110 ndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl----~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~ 184 (476)
T PLN02955 110 NDYLGLSSHPTISNAAANAA-KEYGMGPKGSAL----ICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGS 184 (476)
T ss_pred cCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCc----cccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhh
Confidence 55777788899999999996 456665444555 34444444445556666666678888888887766655532
Q ss_pred -------------CCCccceeeecCCCcccChhhHHHHHhcCC--CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015283 149 -------------RVPWSEYRYYDPKTVGLDFEGMIADIKAAP--GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 213 (410)
Q Consensus 149 -------------g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~--~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 213 (410)
+.+. .+=+ |. ..-..+..-++-.+ ....++.+ +||- .++++++.+-+....
T Consensus 185 ~~~~~~~~~~~~~~~~d-~i~~-D~----~~HaSI~dG~~ls~~~~~a~~~~f--~HND------~~~Le~~L~~~~~~~ 250 (476)
T PLN02955 185 VASLLAASGKPLKNEKV-AIFS-DA----LNHASIIDGVRLAERQGNVEVFVY--RHCD------MYHLNSLLSSCKMKR 250 (476)
T ss_pred ccccccccccccCCCCc-EEEE-ec----cchHHHHHHHHhccccCCceEEEe--CCCC------HHHHHHHHHhCCCCc
Confidence 1111 1111 11 12234433332211 11223332 3332 566777766666567
Q ss_pred CcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 214 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 214 ~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
.+||+|.+|+..+.- .+...+..+....+-.+++.-
T Consensus 251 ~~Vv~EgV~SmdGdi---apL~eL~~L~~~~ga~LiVDE 286 (476)
T PLN02955 251 KVVVTDSLFSMDGDF---APMEELSQLRKKYGFLLVIDD 286 (476)
T ss_pred eEEEEeCCCCCCCCc---CCHHHHHHHHHHcCcEEEEcc
Confidence 899999998866532 223344455555555555544
No 400
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=72.05 E-value=5.6 Score=37.12 Aligned_cols=69 Identities=10% Similarity=0.055 Sum_probs=46.0
Q ss_pred hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283 142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 217 (410)
...+..++.++....+.+..+|.+.++...++-.. .. ......+.|..++.+|+++|++.|+++|+-||
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~---ga----~~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEI---GG----STEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCccccccc---cc----ccccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 34455677888888886666676665554333211 10 01223456778999999999999999998765
No 401
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=69.21 E-value=8.4 Score=35.49 Aligned_cols=68 Identities=9% Similarity=0.015 Sum_probs=45.7
Q ss_pred hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283 142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 217 (410)
...+..++.++....+.+..+|.+..+...++-.. ... .++ .+.|..++++|+++|++.|+++|+-||
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~---g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEK---GGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhh---ccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 34445678888888887666777766655444332 110 111 244668999999999999999998765
No 402
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=67.97 E-value=86 Score=29.05 Aligned_cols=134 Identities=17% Similarity=0.128 Sum_probs=70.3
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC-CCCEEEEcC--CCCcchhhhhhhCCCCcc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAKVLISS--PTWGNHKNIFNDARVPWS 153 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~-~gd~Vl~~~--p~y~~~~~~~~~~g~~~~ 153 (410)
....++.+++.+..... .-...-|.+.+.-||.|.-.++.++...+. .|.+|++.+ |..+..... .|.+..
T Consensus 73 ~~~~~l~~~l~~~~~~~---~~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~~~~~~~~---lg~~~~ 146 (322)
T TIGR03815 73 EAEGWLVELLADLDQSP---PARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPWGGGLDLL---LGAEDV 146 (322)
T ss_pred CCHHHHHHHHHhhccCC---CCCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCCCCCeeee---ecCCCC
Confidence 34567888887763111 111234666666778777666655554444 677777755 444332211 222110
Q ss_pred ----ceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 154 ----EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 154 ----~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
..... .....+|.+.+.+.+.. . . -+-+++.+..+ +..++...++++.+..+++-=++|+|..
T Consensus 147 ~~~~~~~~~-~~~~~~~~~~l~~~~~~-~-~-~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 147 PGLRWPDLS-QARGRLPAGALRDALPR-R-G-GLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLP 213 (322)
T ss_pred CCcCHHHHh-hcCCCcCHHHHHHhCCC-c-C-CeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCC
Confidence 00110 11223566666665543 1 2 23333444433 3446777788888877765557999988
No 403
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=63.77 E-value=9.7 Score=35.87 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=44.9
Q ss_pred hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283 142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 217 (410)
...+..++.++....+.|..+|.+.++...++-.. . ....|..++++|+++|++.|+++|+-||
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~---g---------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK---G---------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc---c---------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 34445677888888887666777776655543221 1 1234677999999999999999998766
No 404
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=61.75 E-value=56 Score=28.29 Aligned_cols=88 Identities=15% Similarity=0.186 Sum_probs=58.2
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
+.-|++ |.++++++-.+ +...+. .|-.|+...-.-..........|.++..++..+++ ++-.++..+...+
T Consensus 7 ~k~VlI--tgcs~GGIG~a--la~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~----~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 7 PKKVLI--TGCSSGGIGYA--LAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPE----EVVTVSGEVRANP 78 (289)
T ss_pred CCeEEE--eecCCcchhHH--HHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChH----HHHHHHHHHhhCC
Confidence 455777 88888888877 444454 88899988877777777777888877777664333 3445555555545
Q ss_pred CCcEEEEeCCCCCCCCC
Q 015283 179 GGSFILLHGCAHNPTGI 195 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~ 195 (410)
....=++++|..-|+..
T Consensus 79 ~Gkld~L~NNAG~~C~~ 95 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCTF 95 (289)
T ss_pred CCceEEEEcCCCCCccc
Confidence 55655666666555433
No 405
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=61.65 E-value=83 Score=29.00 Aligned_cols=51 Identities=16% Similarity=0.486 Sum_probs=34.2
Q ss_pred hhhHHHHHhc-CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 167 FEGMIADIKA-APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 167 ~~~l~~~i~~-~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
++.+.+.+.. ..+...+++- -+=|-|. +.+...+|+++|++.|..+++|..
T Consensus 116 ~~~~l~~~~~~l~~~d~Vvls--GSlP~g~--~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 116 LEQFLEQLKALLESDDIVVLS--GSLPPGV--PPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred HHHHHHHHHHhcccCCEEEEe--CCCCCCC--CHHHHHHHHHHHHhcCCeEEEECC
Confidence 3444444444 3344555553 3445555 466799999999999999999988
No 406
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=60.76 E-value=10 Score=35.04 Aligned_cols=61 Identities=8% Similarity=0.100 Sum_probs=39.7
Q ss_pred hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283 143 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 143 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 217 (410)
+.+..++.++....+.+..+|.+..+.+.++-.. . ..|..++.+|+++|++.|+++|+-||
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~---g-----------~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQK---A-----------SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCcccccc---C-----------CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 3444567777777776555665554433221110 0 13567999999999999999998665
No 407
>PLN03244 alpha-amylase; Provisional
Probab=59.64 E-value=11 Score=38.98 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
+.--|+....++++++.+++-|++.|+-||.|-||.+++.+
T Consensus 429 ~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 429 NFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 34455555566999999999999999999999999888753
No 408
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=59.40 E-value=15 Score=25.13 Aligned_cols=35 Identities=17% Similarity=0.380 Sum_probs=23.7
Q ss_pred CCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFD 219 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D 219 (410)
+.+.+++ +|.+. ++ .+++++|.++..+=|.++|+|
T Consensus 35 ~~tll~i-----~~~~~-~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 35 DGTLLVI-----GPDLR-LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CCEEEEE-----eCCCC-CCchHHHHHHHHHHHcCCEEEEeC
Confidence 3555555 44444 44 588999999999777777654
No 409
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=57.59 E-value=1.2e+02 Score=26.08 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=50.1
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 179 (410)
...+++ +.||..|..-+. ..+..|-.|.+.+|....-...+...| ++..+.- + .+.+. +.
T Consensus 9 gk~vlV--vGgG~va~rk~~---~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~---~---~~~~d----l~---- 68 (205)
T TIGR01470 9 GRAVLV--VGGGDVALRKAR---LLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR---C---FDADI----LE---- 68 (205)
T ss_pred CCeEEE--ECcCHHHHHHHH---HHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC---C---CCHHH----hC----
Confidence 456777 777777776652 224567788888887654333333333 3333321 1 12222 22
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-ccccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP-FFDVA 221 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l-i~Dea 221 (410)
...+++ ..+++ .+.=+.+...|++.++++ +.|+.
T Consensus 69 ~~~lVi-~at~d-------~~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 69 GAFLVI-AATDD-------EELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CcEEEE-ECCCC-------HHHHHHHHHHHHHcCCEEEECCCc
Confidence 233344 22332 333467888899998876 35554
No 410
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=55.10 E-value=11 Score=38.50 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=29.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
|+.|++. .++++++++-|+++|+-||+|-||.+.+
T Consensus 221 p~~~~~~---~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 221 PYDPATR---IRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCccchH---HHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 4445443 6899999999999999999999997765
No 411
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=53.12 E-value=22 Score=34.71 Aligned_cols=76 Identities=9% Similarity=0.033 Sum_probs=46.5
Q ss_pred hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCC------cEEEE---eCCC--CCCCCCCCCHHHHHHHHHHHH
Q 015283 142 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG------SFILL---HGCA--HNPTGIDPTPEQWEKIADVIQ 210 (410)
Q Consensus 142 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~------~~~ii---~~~p--~NPtG~~~~~~~l~~i~~~~~ 210 (410)
...+..++.++....+.+..+|.+.++.+-++-.....+ ...+. -..+ ..+.|..++++|+++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 344556778888888877777777766654432210000 00010 0111 123467799999999999999
Q ss_pred HcCCccc
Q 015283 211 EKNHIPF 217 (410)
Q Consensus 211 ~~~~~li 217 (410)
++|+-||
T Consensus 108 ~rgI~VI 114 (445)
T cd06569 108 ARHIEVI 114 (445)
T ss_pred HcCCEEE
Confidence 9998755
No 412
>smart00642 Aamy Alpha-amylase domain.
Probab=50.77 E-value=17 Score=30.16 Aligned_cols=28 Identities=14% Similarity=0.262 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+.||.|-+..+.+
T Consensus 69 ~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 96 (166)
T smart00642 69 MEDFKELVDAAHARGIKVILDVVINHTS 96 (166)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 7999999999999999999999965544
No 413
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=50.33 E-value=58 Score=30.22 Aligned_cols=108 Identities=20% Similarity=0.307 Sum_probs=61.9
Q ss_pred cCChhhHHHHHHHHHHHhC-CCCEEEEcCC-CCc-chhh----hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283 108 GLSGTGSLRLAAALIERYF-PGAKVLISSP-TWG-NHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~-~gd~Vl~~~p-~y~-~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 180 (410)
-.+|+|=-..+.++...+. .|-+|++... +|- +..+ ..++.|..++.-+. ..+.-..-++.++....+ +.
T Consensus 146 GVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~-G~DpAaVafDAi~~Akar--~~ 222 (340)
T COG0552 146 GVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKE-GADPAAVAFDAIQAAKAR--GI 222 (340)
T ss_pred ecCCCchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCC-CCCcHHHHHHHHHHHHHc--CC
Confidence 4455555555555555544 8888887654 442 2233 33455666554321 111112234455555544 45
Q ss_pred cEEEEeCC--CCCCCCCCCCHHHHHHHHHHHHHcC------Cccccccc
Q 015283 181 SFILLHGC--AHNPTGIDPTPEQWEKIADVIQEKN------HIPFFDVA 221 (410)
Q Consensus 181 ~~~ii~~~--p~NPtG~~~~~~~l~~i~~~~~~~~------~~li~Dea 221 (410)
.++++-+. -||-+.. .+||++|.+++++.. +++++|..
T Consensus 223 DvvliDTAGRLhnk~nL---M~EL~KI~rV~~k~~~~ap~e~llvlDAt 268 (340)
T COG0552 223 DVVLIDTAGRLHNKKNL---MDELKKIVRVIKKDDPDAPHEILLVLDAT 268 (340)
T ss_pred CEEEEeCcccccCchhH---HHHHHHHHHHhccccCCCCceEEEEEEcc
Confidence 56666222 2777777 788999999999754 67777887
No 414
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=49.89 E-value=2e+02 Score=26.59 Aligned_cols=118 Identities=12% Similarity=0.013 Sum_probs=63.7
Q ss_pred HHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC--CEEEEcC--CCCcchh--hhhhhCCCCccc
Q 015283 81 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGNHK--NIFNDARVPWSE 154 (410)
Q Consensus 81 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g--d~Vl~~~--p~y~~~~--~~~~~~g~~~~~ 154 (410)
..++.|+++-.... ....+++ |.|-++..... +......| -+|++.+ |...+.. ..+...|.++..
T Consensus 105 ~~~~~I~~~a~~~i----~~g~~IL--T~~~S~tv~~~--l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtl 176 (310)
T PRK08535 105 NAVEKIGEIGAKRI----RDGDVIM--THCNSSAALSV--IKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTL 176 (310)
T ss_pred HHHHHHHHHHHHHc----CCCCEEE--EeCCcHHHHHH--HHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEE
Confidence 44555555532221 1334555 77777666655 23233333 4666655 5555432 233345655554
Q ss_pred eeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccc
Q 015283 155 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 219 (410)
Q Consensus 155 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 219 (410)
++ | ..+-..+.+ -.++++-...-.+.|.+.++.---.++-+|+.+++.+++=
T Consensus 177 I~---------D-sav~~~m~~---vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 177 IV---------D-SAVRYFMKD---VDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred Ee---------h-hHHHHHHHh---CCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 43 2 334444443 4555553333455666666666677888899999888763
No 415
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=49.76 E-value=26 Score=33.10 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=44.9
Q ss_pred hhhhhCCCCccceeeecCCCcccChhhHHHHHhcC--CCCcEEEE--eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 143 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILL--HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 143 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii--~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
..+..++.++....+.+..+|.+.++.+.++-... ...+..-. ...-..|.|..++++|+++|++.|+++|+-||-
T Consensus 25 d~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 25 DLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred HHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 34445677777777766666766665554332110 00000000 001123457789999999999999999987663
No 416
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=49.11 E-value=1.7e+02 Score=26.79 Aligned_cols=105 Identities=13% Similarity=0.088 Sum_probs=61.4
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHhCCCC--EEEEcC--CCCcchhhhhh--hCCCCccceeeecCCCcccChhhHHHH
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISS--PTWGNHKNIFN--DARVPWSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd--~Vl~~~--p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
.++|++ |.|.+...+.. +-....+|. +|++.+ |.+.++...-. ..|.+..-++ | ..+-+.
T Consensus 162 snEviL--T~g~SrTV~~F--L~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~ 227 (353)
T KOG1465|consen 162 SNEVIL--TLGSSRTVENF--LKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAM 227 (353)
T ss_pred cCceEE--ecCccHHHHHH--HHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHH
Confidence 456777 88877777765 222344543 455655 66665432222 3344333332 2 555666
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 174 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
..+ -.++++-...--+.|.+....-...++..|++|-..+|+=.-
T Consensus 228 Msr---VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 228 MSR---VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred hhh---cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 665 455565555555666666666677888889988887776443
No 417
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=49.00 E-value=21 Score=35.87 Aligned_cols=31 Identities=19% Similarity=0.348 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.+.++++++++-|+++|+-||+|-+|.+++.
T Consensus 157 G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~ 187 (542)
T TIGR02402 157 GGPDDLKALVDAAHGLGLGVILDVVYNHFGP 187 (542)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCCCCC
Confidence 3489999999999999999999999987653
No 418
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=48.05 E-value=11 Score=35.52 Aligned_cols=67 Identities=9% Similarity=0.007 Sum_probs=42.3
Q ss_pred hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 143 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 143 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
..+..++.+.....+.+..+|.+.+..+.++-... . . .++.+ |..++++|+++|++.|+++|+-||-
T Consensus 25 d~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~g---a---~--~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 25 DQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKG---A---Y--RPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTT---T---E--STTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHHHcCCcEEEEEEecCCCCccccCCCccccccC---c---c--ccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 44456788888888877667777665554433220 0 0 01113 4489999999999999999987763
No 419
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=46.70 E-value=86 Score=23.05 Aligned_cols=68 Identities=7% Similarity=-0.031 Sum_probs=42.9
Q ss_pred cchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 139 GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 139 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
..|...++.+|.+.... - ..++.......++..+.+ ...+|++++. .+.+-...+.+.|+++|+.++.
T Consensus 13 ~~~~~~~~~~G~~~~~h-g-~~~~~~~~~~~l~~~i~~---aD~VIv~t~~-------vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 13 RRYKRILEKYGGKLIHH-G-RDGGDEKKASRLPSKIKK---ADLVIVFTDY-------VSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred HHHHHHHHHcCCEEEEE-e-cCCCCccchhHHHHhcCC---CCEEEEEeCC-------cChHHHHHHHHHHHHcCCcEEE
Confidence 46777888899887777 2 122222233347777765 4555554221 3366678888999999988764
No 420
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=45.36 E-value=88 Score=25.00 Aligned_cols=19 Identities=11% Similarity=0.071 Sum_probs=16.4
Q ss_pred HHHHHHhhhcCcEEEcCCC
Q 015283 365 KAQSDNMTNKWHVYMTKDG 383 (410)
Q Consensus 365 ~~~~~~ll~~~gi~v~~~g 383 (410)
.+.+..|..|+|..|.++|
T Consensus 48 NeVLkALc~eAGw~Ve~DG 66 (150)
T PF05687_consen 48 NEVLKALCREAGWTVEPDG 66 (150)
T ss_pred HHHHHHHHHhCCEEEccCC
Confidence 5668899999999999987
No 421
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=44.17 E-value=1.8e+02 Score=26.74 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=59.8
Q ss_pred eEEEecCChhhHHHHHHHHHHHhCCC-CEEEEcC-CC--Ccch--hhhhhhCCCCccceeeecCCCc--ccChhhHHHHH
Q 015283 103 VATVQGLSGTGSLRLAAALIERYFPG-AKVLISS-PT--WGNH--KNIFNDARVPWSEYRYYDPKTV--GLDFEGMIADI 174 (410)
Q Consensus 103 i~~~~t~ggt~a~~~~~~~~~~~~~g-d~Vl~~~-p~--y~~~--~~~~~~~g~~~~~v~~~~~~~~--~~d~~~l~~~i 174 (410)
-++ |.||.+++++-......-.-| +.|++.+ +. |... .-....+|..++.++. ..++ ....+.+.+.+
T Consensus 66 Tlv--T~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~--~~d~~~~~~~~~~~e~~ 141 (323)
T COG2515 66 TLV--TYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDA--GTDIGINASAEELAEEV 141 (323)
T ss_pred EEE--EecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecC--CCChhhchhhHHHHHHH
Confidence 455 899999888743222222223 5555433 22 3322 2233467888877765 3333 44567777777
Q ss_pred hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 015283 175 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 212 (410)
Q Consensus 175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~ 212 (410)
++.+.++.+|.. ...||.|..-=..--.||.+.++++
T Consensus 142 ~~~g~kpyvIp~-GG~~~~g~lGyv~~a~Ei~~Q~~~~ 178 (323)
T COG2515 142 RKQGGKPYVIPE-GGSSPLGALGYVRLALEIAEQAEQL 178 (323)
T ss_pred HhcCCCCcEecc-CCcCccccccHHHHHHHHHHHHhhc
Confidence 665555555543 3378976655466677777777753
No 422
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=43.39 E-value=2.4e+02 Score=25.18 Aligned_cols=100 Identities=11% Similarity=-0.022 Sum_probs=57.5
Q ss_pred CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcC--CCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283 101 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISS--PTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 101 ~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
+.+++ |.|.+..+... +..-.++.+|++.+ |.+.+.. ..+...|.++..++ | ..+-..+.+
T Consensus 87 ~dvIL--T~s~S~~v~~~---l~~~~~~~~V~v~ESrP~~eG~~~a~~L~~~GI~vtli~---------D-sa~~~~m~~ 151 (253)
T PRK06372 87 DSVIG--TISSSQVLKAF---ISSSEKIKSVYILESRPMLEGIDMAKLLVKSGIDVVLLT---------D-ASMCEAVLN 151 (253)
T ss_pred CCEEE--EeCCcHHHHHH---HHhcCCCCEEEEecCCCchHHHHHHHHHHHCCCCEEEEe---------h-hHHHHHHHh
Confidence 35666 78866666654 32333446787766 6655532 22224565554332 2 233333433
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
-+++++-..--...|.++++---..++-.|+.+++.+++
T Consensus 152 ---vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 152 ---VDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred ---CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 556665333334566666666667788889999999887
No 423
>PLN02960 alpha-amylase
Probab=42.91 E-value=29 Score=36.70 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=31.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
|++...+.++++++++-|+++|+-||.|-||.+++..
T Consensus 458 ~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d 494 (897)
T PLN02960 458 VSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 494 (897)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEecccccCCc
Confidence 3445567999999999999999999999999888753
No 424
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=42.49 E-value=2.7e+02 Score=25.62 Aligned_cols=80 Identities=9% Similarity=-0.059 Sum_probs=44.2
Q ss_pred CEEEEcC--CCCcc-h--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283 129 AKVLISS--PTWGN-H--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 203 (410)
Q Consensus 129 d~Vl~~~--p~y~~-~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~ 203 (410)
-+|++.+ |.+.+ . ...+...|.++..++ | ..+-..+.. +.-+++++=..--...|.+.++----
T Consensus 153 ~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~---------D-sa~~~~m~~-~~vd~VlvGAd~v~~nG~v~nk~GT~ 221 (303)
T TIGR00524 153 IRVIACETRPRNQGSRLTAWELMQDGIDVTLIT---------D-SMAAYFMQK-GEIDAVIVGADRIARNGDVANKIGTY 221 (303)
T ss_pred eEEEECCCCCccchHHHHHHHHHHCCCCEEEEC---------h-hHHHHHccc-cCCCEEEEcccEEecCCCEeEhhhHH
Confidence 5677764 66655 2 233345565554442 1 333333431 12555555333344556666666556
Q ss_pred HHHHHHHHcCCccccc
Q 015283 204 KIADVIQEKNHIPFFD 219 (410)
Q Consensus 204 ~i~~~~~~~~~~li~D 219 (410)
.++-.|+.+++.+++=
T Consensus 222 ~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 222 QLAVLAKEFRIPFFVA 237 (303)
T ss_pred HHHHHHHHhCCCEEEe
Confidence 7777889999888763
No 425
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=42.12 E-value=2.6e+02 Score=25.22 Aligned_cols=42 Identities=14% Similarity=0.178 Sum_probs=25.0
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH------HcCCccccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ------EKNHIPFFDVA 221 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~------~~~~~li~Dea 221 (410)
....+++-+.+.+++ -..-.++++++.+.+. ..+.++|+|..
T Consensus 154 ~~D~ViIDT~G~~~~-d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~ 201 (272)
T TIGR00064 154 NIDVVLIDTAGRLQN-KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDAT 201 (272)
T ss_pred CCCEEEEeCCCCCcc-hHHHHHHHHHHHHHHhcccCCCCceEEEEEECC
Confidence 355666644444443 1111446777777777 56788888886
No 426
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=42.08 E-value=2.8e+02 Score=25.52 Aligned_cols=118 Identities=12% Similarity=0.052 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC--CEEEEcC--CCCcchh--hhhhhCCCCcc
Q 015283 80 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGNHK--NIFNDARVPWS 153 (410)
Q Consensus 80 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g--d~Vl~~~--p~y~~~~--~~~~~~g~~~~ 153 (410)
...++.|+++-.... ....+++ |.|-++..... +......| =+|++.+ |.+.+.. ..+...|..+.
T Consensus 99 ~~a~~~I~~~a~~~i----~~g~~IL--T~~~S~tv~~~--l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vt 170 (301)
T TIGR00511 99 DKAQERIGEIGAKRI----RDGDVVM--THCNSEAALSV--IKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVT 170 (301)
T ss_pred HHHHHHHHHHHHHHc----CCCCEEE--EECCcHHHHHH--HHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEE
Confidence 345555555533221 1234555 67766665554 22223333 4666655 6655532 22334565554
Q ss_pred ceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 154 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 154 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
.++ | ..+-..+.+ -+++++-..---..|.+.++----.++-.|+.+++.+++
T Consensus 171 lI~---------D-sa~~~~m~~---vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 171 LIV---------D-SAVRYFMKE---VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred EEe---------h-hHHHHHHHh---CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 443 2 333334443 455555333334456566666556778889999888876
No 427
>PRK12313 glycogen branching enzyme; Provisional
Probab=41.85 E-value=33 Score=35.35 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=28.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
...+.++++++++.|+++|+-||.|-|+.+++.
T Consensus 215 ~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~ 247 (633)
T PRK12313 215 RYGTPEDFMYLVDALHQNGIGVILDWVPGHFPK 247 (633)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 445689999999999999999999999877663
No 428
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=40.93 E-value=33 Score=35.19 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
...+.++++++++.|+++|+-||.|-|+.+++.
T Consensus 201 ~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~ 233 (613)
T TIGR01515 201 RFGTPDDFMYFVDACHQAGIGVILDWVPGHFPK 233 (613)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccCcCC
Confidence 445689999999999999999999999877763
No 429
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=40.78 E-value=2.5e+02 Score=25.39 Aligned_cols=140 Identities=16% Similarity=0.194 Sum_probs=68.5
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEE
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 133 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~ 133 (410)
.|...+++...-..+...-|- .......++.+++.+....+.+.++++|+ .+|+.+... ++...++.+|.+
T Consensus 26 ipga~e~l~~L~~~g~~~ifl-TNn~~~s~~~~~~~L~~~~~~~~~~~~i~----TS~~at~~~----l~~~~~~~kv~v 96 (269)
T COG0647 26 IPGAAEALKRLKAAGKPVIFL-TNNSTRSREVVAARLSSLGGVDVTPDDIV----TSGDATADY----LAKQKPGKKVYV 96 (269)
T ss_pred CchHHHHHHHHHHcCCeEEEE-eCCCCCCHHHHHHHHHhhcCCCCCHHHee----cHHHHHHHH----HHhhCCCCEEEE
Confidence 466666666544333211121 22222445555555544456666778773 334433333 344456678887
Q ss_pred cCCCCcchhhhhhhCCCCccc---------eeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC--CCCC--CCCCCHH
Q 015283 134 SSPTWGNHKNIFNDARVPWSE---------YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA--HNPT--GIDPTPE 200 (410)
Q Consensus 134 ~~p~y~~~~~~~~~~g~~~~~---------v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p--~NPt--G~~~~~~ 200 (410)
.... ...+.++.+|..+.. +-+ ..+..++++.+.+++.....+ .-++.+|| .-|| |..+-.-
T Consensus 97 iG~~--~l~~~l~~~G~~~~~~~~~~~~d~Vv~--g~d~~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~g~~pgaG 171 (269)
T COG0647 97 IGEE--GLKEELEGAGFELVDEEEPARVDAVVV--GLDRTLTYEKLAEALLAIAAG-APFIATNPDLTVPTERGLRPGAG 171 (269)
T ss_pred ECCc--chHHHHHhCCcEEeccCCCCcccEEEE--ecCCCCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCCCCccCcH
Confidence 6633 555666666654433 212 223446677776654332224 34444555 3343 4444333
Q ss_pred HHHHHHH
Q 015283 201 QWEKIAD 207 (410)
Q Consensus 201 ~l~~i~~ 207 (410)
-+.+.++
T Consensus 172 ai~~~~~ 178 (269)
T COG0647 172 AIAALLE 178 (269)
T ss_pred HHHHHHH
Confidence 3444443
No 430
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=40.56 E-value=33 Score=35.87 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=29.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
...++++++++++-|+++|+-||.|-++..++.
T Consensus 295 ~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~ 327 (758)
T PLN02447 295 RSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASK 327 (758)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeccccccc
Confidence 445689999999999999999999999987764
No 431
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=40.02 E-value=2.5e+02 Score=26.19 Aligned_cols=20 Identities=10% Similarity=-0.046 Sum_probs=12.7
Q ss_pred HHHHhhhcCcEEEcCCCeEEe
Q 015283 367 QSDNMTNKWHVYMTKDGRISL 387 (410)
Q Consensus 367 ~~~~ll~~~gi~v~~~gRis~ 387 (410)
.++-. .+.||...+|+.+++
T Consensus 270 ~~~~a-~~~g~i~k~g~w~~~ 289 (321)
T TIGR02012 270 IIDLA-VELDIIKKAGSWYSY 289 (321)
T ss_pred HHHHH-HhCCcEEcccCEEEE
Confidence 34444 447888888875555
No 432
>PRK09354 recA recombinase A; Provisional
Probab=39.96 E-value=2.3e+02 Score=26.73 Aligned_cols=91 Identities=12% Similarity=0.069 Sum_probs=45.8
Q ss_pred CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC------CCC---
Q 015283 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT------GID--- 196 (410)
Q Consensus 126 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt------G~~--- 196 (410)
..|..++..+.........++..|..+..+-+...+...--++.++.++++ ....++++.+...-. |..
T Consensus 86 ~~G~~~~yId~E~s~~~~~a~~lGvdld~lli~qp~~~Eq~l~i~~~li~s--~~~~lIVIDSvaaL~~~~E~eg~~gd~ 163 (349)
T PRK09354 86 KAGGTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDTGEQALEIADTLVRS--GAVDLIVVDSVAALVPKAEIEGEMGDS 163 (349)
T ss_pred HcCCcEEEECCccchHHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHhhc--CCCCEEEEeChhhhcchhhhcCCcccc
Confidence 467777777766655566777777766555443222111112223333433 234445545543221 110
Q ss_pred --CCHHH-----HHHHHHHHHHcCCcccc
Q 015283 197 --PTPEQ-----WEKIADVIQEKNHIPFF 218 (410)
Q Consensus 197 --~~~~~-----l~~i~~~~~~~~~~li~ 218 (410)
-.... +..|..+++++|+.+|+
T Consensus 164 ~~~~qar~ms~~Lr~L~~~l~k~~itvI~ 192 (349)
T PRK09354 164 HVGLQARLMSQALRKLTGNISKSNTTVIF 192 (349)
T ss_pred chhHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 01122 56677777888877665
No 433
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=39.65 E-value=3.1e+02 Score=25.25 Aligned_cols=102 Identities=15% Similarity=0.033 Sum_probs=55.9
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHhCCCC--EEEEcC--CCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHH
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISS--PTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd--~Vl~~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
..++++ |.+-+.+...+ +......|. +|++.+ |.+.+.. ..++..|.++..++ | ..+-..
T Consensus 119 dg~~Il--Th~~S~~v~~~--l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------D-sa~~~~ 184 (301)
T COG1184 119 DGDVIL--THSFSKTVLEV--LKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------D-SAVGAF 184 (301)
T ss_pred CCCEEE--EecCcHHHHHH--HHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------c-hHHHHH
Confidence 345666 77776666655 333344554 666655 7777653 34556674444432 2 333444
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 174 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
+++ -.++++-...---.|.++++.-=-.|+..|++.+.++++
T Consensus 185 ~~~---vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 185 MSR---VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred HHh---CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 443 455555322223335555555556677778888776654
No 434
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=39.02 E-value=3.3e+02 Score=25.53 Aligned_cols=99 Identities=15% Similarity=0.069 Sum_probs=52.5
Q ss_pred ecCChhhHHHHHHHHHHHhCCCCEE--EEcCCCCc------chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283 107 QGLSGTGSLRLAAALIERYFPGAKV--LISSPTWG------NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~~gd~V--l~~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
..|||-.+..++..+...+ |..+ +..++.|. .....++..|.....+.. |.+.+......
T Consensus 65 ~lSGGkDSs~la~ll~~~~--gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~~-- 132 (343)
T TIGR03573 65 GVSGGKDSTYQAHVLKKKL--GLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQRA-- 132 (343)
T ss_pred ECCCCHHHHHHHHHHHHHh--CCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHHH--
Confidence 3788877766653232222 3333 45566664 223344557766665543 44554443332
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 224 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 224 (410)
... -..+|..++. ......+.++|+++|+.+|+.....+
T Consensus 133 -~~~--~~~~pc~~c~----~~~~~~l~~~A~~~gi~~Il~G~~~d 171 (343)
T TIGR03573 133 -YFK--KVGDPEWPQD----HAIFASVYQVALKFNIPLIIWGENIA 171 (343)
T ss_pred -HHh--ccCCCchhhh----hHHHHHHHHHHHHhCCCEEEeCCCHH
Confidence 000 1123333332 22356778889999999998766544
No 435
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=38.56 E-value=80 Score=25.35 Aligned_cols=55 Identities=18% Similarity=0.255 Sum_probs=37.9
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHc-CCc-cccccc
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEK-NHI-PFFDVA 221 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~-~~~-li~Dea 221 (410)
.+++.+.+.+++. ....+++..|.|..|...+..+ .+++++..++. ++. ++.||=
T Consensus 40 ~~~~~l~~li~~~--~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 40 QDFNALLKLVKEY--QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hhHHHHHHHHHHh--CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 4889999998874 4455566789999998877554 77777766653 443 344554
No 436
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.06 E-value=2.9e+02 Score=25.34 Aligned_cols=103 Identities=19% Similarity=0.105 Sum_probs=46.5
Q ss_pred ccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCC---CCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283 98 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSP---TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 174 (410)
Q Consensus 98 ~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p---~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 174 (410)
++.+-+++ |.||+|-=..+ .+...+.|-++++-+- +...+.+.++..| ++..+.++-.+ .-++..+.+.+
T Consensus 36 v~g~~vLI--TGgg~GlGr~i--alefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~--~eei~~~a~~V 108 (300)
T KOG1201|consen 36 VSGEIVLI--TGGGSGLGRLI--ALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISD--REEIYRLAKKV 108 (300)
T ss_pred ccCCEEEE--eCCCchHHHHH--HHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCC--HHHHHHHHHHH
Confidence 33344555 66665533333 2333446777766553 2223344444445 55555441111 01333344444
Q ss_pred hcCCCCcEEEEeCCCCCCC---CCCCCHHHHHHHHHH
Q 015283 175 KAAPGGSFILLHGCAHNPT---GIDPTPEQWEKIADV 208 (410)
Q Consensus 175 ~~~~~~~~~ii~~~p~NPt---G~~~~~~~l~~i~~~ 208 (410)
++. -+++-++++|..=-+ ....+.+++++..++
T Consensus 109 k~e-~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 109 KKE-VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HHh-cCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 442 223444445542222 334567777776543
No 437
>PRK14706 glycogen branching enzyme; Provisional
Probab=37.83 E-value=34 Score=35.22 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=28.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
...+.++++++++.|++.|+-||.|-+|.+++.
T Consensus 212 ~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~ 244 (639)
T PRK14706 212 RLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPT 244 (639)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccccCc
Confidence 445689999999999999999999999987653
No 438
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=37.41 E-value=3.1e+02 Score=26.61 Aligned_cols=52 Identities=13% Similarity=0.147 Sum_probs=25.6
Q ss_pred ChhhHHHHHhcCC---CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH---HcCCccccccc
Q 015283 166 DFEGMIADIKAAP---GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ---EKNHIPFFDVA 221 (410)
Q Consensus 166 d~~~l~~~i~~~~---~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~---~~~~~li~Dea 221 (410)
+.+.+.+.+.... +...+++-+...|+. +...+.++.++.+ .+.+++++|..
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~k----d~~lm~EL~~~lk~~~PdevlLVLsAT 361 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNYR----ASETVEEMIETMGQVEPDYICLTLSAS 361 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccCc----CHHHHHHHHHHHhhcCCCeEEEEECCc
Confidence 4566655554321 235555533334341 2333555555444 35567777765
No 439
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=36.70 E-value=1.2e+02 Score=23.68 Aligned_cols=59 Identities=10% Similarity=0.102 Sum_probs=38.3
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC---CCCCCCCCCHHHHHHHHHHHHHcCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA---HNPTGIDPTPEQWEKIADVIQEKNH 214 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p---~NPtG~~~~~~~l~~i~~~~~~~~~ 214 (410)
+++.+|. .+.+|+..+.+.+.+. -..++++-|.| ++..|.......++.+.++..+.|+
T Consensus 30 riIrvpC----~Grv~~~~il~Af~~G-ADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 30 RIIRVPC----SGRVDPEFILRAFEKG-ADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred EEEEccC----CCccCHHHHHHHHHcC-CCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 4445554 4568999999999872 22344444444 5578887777777777777766553
No 440
>PRK05402 glycogen branching enzyme; Provisional
Probab=36.59 E-value=43 Score=35.14 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=30.0
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.....+.++++++++-|+++|+-||.|-|+.+++.
T Consensus 308 ~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~ 342 (726)
T PRK05402 308 TSRFGTPDDFRYFVDACHQAGIGVILDWVPAHFPK 342 (726)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 44556799999999999999999999999877653
No 441
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=35.98 E-value=89 Score=27.87 Aligned_cols=71 Identities=11% Similarity=0.089 Sum_probs=40.7
Q ss_pred hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCccccc
Q 015283 141 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFD 219 (410)
Q Consensus 141 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~D 219 (410)
....++.+-.+.+--|..+..+ +.+.++..+.+ -.++++- | -.|... -.+.+++|.++++++++.+|+|
T Consensus 69 Aa~vIKsYsPdLIVHP~l~~~~---av~~i~k~L~R---lhavVIG--P--GLGRdp~~~k~i~~iley~~~~dvP~VID 138 (306)
T KOG3974|consen 69 AAVVIKSYSPDLIVHPVLDQEN---AVDIIEKLLQR---LHAVVIG--P--GLGRDPAILKEIAKILEYLRGKDVPLVID 138 (306)
T ss_pred HHHHHhhcCCceeecccccCCc---hHhHHHHHHhh---eeEEEEC--C--CCCCCHHHHHHHHHHHHHHhcCCCcEEEc
Confidence 3445555555555445432221 44555555653 3444442 1 134322 2566889999999999999999
Q ss_pred cc
Q 015283 220 VA 221 (410)
Q Consensus 220 ea 221 (410)
.=
T Consensus 139 aD 140 (306)
T KOG3974|consen 139 AD 140 (306)
T ss_pred CC
Confidence 76
No 442
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=35.77 E-value=22 Score=32.31 Aligned_cols=29 Identities=14% Similarity=0.245 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++.|+++|+.||+|-+..+.+.
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~~ 79 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTSD 79 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEET
T ss_pred hhhhhhhhhccccccceEEEeeecccccc
Confidence 89999999999999999999999766553
No 443
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=34.42 E-value=1.5e+02 Score=23.80 Aligned_cols=71 Identities=15% Similarity=0.105 Sum_probs=37.9
Q ss_pred hhhhhC-CCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 143 NIFNDA-RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 143 ~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
..++.. |..+..+ ..+..++ + .++.+.+.+ ....+++ +.| .|+|.-....+-..|.+.|.+|++.++..-.
T Consensus 43 ~~L~~~~Gi~v~~v-i~~~~gg--~-~~i~~~I~~--g~i~lVI-nt~-dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 43 GLIQEATGLDVTRL-LSGPLGG--D-QQIGALIAE--GKIDMLI-FFR-DPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred HHHHhccCCeeEEE-EcCCCCC--c-hhHHHHHHc--CceeEEE-Eec-CCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 445555 7766665 3221112 2 556677765 2333333 333 1123322245677888889999998765433
No 444
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=34.40 E-value=1.4e+02 Score=22.81 Aligned_cols=66 Identities=12% Similarity=0.086 Sum_probs=35.6
Q ss_pred hhhh-CCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283 144 IFND-ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 144 ~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 217 (410)
.++. .|..+..++. ...++ + .++.+.+.. ..+-++++.| +|-|.-....+-..|.+.|.++++.++
T Consensus 39 ~L~~~~Gi~v~~vk~-~~~~g--~-~~i~~~i~~---g~i~~VInt~-~~~~~~~~~~dg~~iRr~a~~~~Ip~~ 105 (115)
T cd01422 39 LIQEATGLTVNRMKS-GPLGG--D-QQIGALIAE---GEIDAVIFFR-DPLTAQPHEPDVKALLRLCDVYNIPLA 105 (115)
T ss_pred HHHHhhCCcEEEEec-CCCCc--h-hHHHHHHHc---CceeEEEEcC-CCCCCCcccccHHHHHHHHHHcCCCEE
Confidence 3444 6777666632 11111 2 557777765 2333333333 222332224567788888999998765
No 445
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=34.22 E-value=3.4e+02 Score=24.19 Aligned_cols=101 Identities=18% Similarity=0.314 Sum_probs=56.6
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH---Hh
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAH-NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL---FA 241 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~-NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~---~~ 241 (410)
+++++...+.. ++.+.+++ |. ++| .+-++++..+..+-+ +|+|.=.+.+- | +++. +.
T Consensus 49 sl~el~~~L~~--pr~vWlMv--Pag~it-----~~vi~~la~~L~~GD--ivIDGGNS~y~------D--s~rr~~~l~ 109 (300)
T COG1023 49 SLDELVAKLSA--PRIVWLMV--PAGDIT-----DAVIDDLAPLLSAGD--IVIDGGNSNYK------D--SLRRAKLLA 109 (300)
T ss_pred CHHHHHHhcCC--CcEEEEEc--cCCCch-----HHHHHHHHhhcCCCC--EEEECCccchH------H--HHHHHHHHH
Confidence 46777776664 44444443 53 366 445667766666544 56676533332 1 3333 22
Q ss_pred hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283 242 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 288 (410)
Q Consensus 242 ~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~ 288 (410)
..+-+.+-+++ +=|+.|.+-||..-+.++++..+++...++...
T Consensus 110 ~kgi~flD~GT---SGG~~G~~~G~~lMiGG~~~a~~~~~pif~~lA 153 (300)
T COG1023 110 EKGIHFLDVGT---SGGVWGAERGYCLMIGGDEEAVERLEPIFKALA 153 (300)
T ss_pred hcCCeEEeccC---CCCchhhhcCceEEecCcHHHHHHHHHHHHhhC
Confidence 22223333333 335567888887778888888888777666443
No 446
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=34.12 E-value=95 Score=23.47 Aligned_cols=69 Identities=17% Similarity=0.206 Sum_probs=35.4
Q ss_pred CCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 015283 137 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 216 (410)
Q Consensus 137 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 216 (410)
.|..+.+++......++.+-+.+. .-.+.....++. ...+++ - -|.+. +.++.+++.+.++++|..+
T Consensus 50 ~~~~~~~ll~~~~~D~V~I~tp~~----~h~~~~~~~l~~---g~~v~~-E---KP~~~--~~~~~~~l~~~a~~~~~~~ 116 (120)
T PF01408_consen 50 VYTDLEELLADEDVDAVIIATPPS----SHAEIAKKALEA---GKHVLV-E---KPLAL--TLEEAEELVEAAKEKGVKV 116 (120)
T ss_dssp EESSHHHHHHHTTESEEEEESSGG----GHHHHHHHHHHT---TSEEEE-E---SSSSS--SHHHHHHHHHHHHHHTSCE
T ss_pred chhHHHHHHHhhcCCEEEEecCCc----chHHHHHHHHHc---CCEEEE-E---cCCcC--CHHHHHHHHHHHHHhCCEE
Confidence 334444455544444444433111 123444455554 334444 2 33322 4778888888888888766
Q ss_pred cc
Q 015283 217 FF 218 (410)
Q Consensus 217 i~ 218 (410)
.+
T Consensus 117 ~V 118 (120)
T PF01408_consen 117 MV 118 (120)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 447
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=33.29 E-value=1.7e+02 Score=23.35 Aligned_cols=58 Identities=17% Similarity=0.143 Sum_probs=36.6
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHc--CCcccccccCCC
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEK--NHIPFFDVAYQG 224 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~--~~~li~Deay~~ 224 (410)
.+++.+.+.+++. ....+++.-|-|..|..-+... .+++++..++. --+...||-|+.
T Consensus 41 ~~~~~l~~~i~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~TT 101 (138)
T PRK00109 41 PDWDRLEKLIKEW--QPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLST 101 (138)
T ss_pred hHHHHHHHHHHHh--CCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 4678888888773 3344555789888888654433 55665555442 335567888653
No 448
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=33.29 E-value=40 Score=31.40 Aligned_cols=26 Identities=8% Similarity=0.059 Sum_probs=22.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li 217 (410)
+.+..++++|+++|++.|+++|+-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45678999999999999999998664
No 449
>PRK04296 thymidine kinase; Provisional
Probab=33.28 E-value=2.9e+02 Score=23.19 Aligned_cols=111 Identities=12% Similarity=0.009 Sum_probs=58.4
Q ss_pred hCCCCEEEEcCCCCcc---hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283 125 YFPGAKVLISSPTWGN---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 201 (410)
Q Consensus 125 ~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~ 201 (410)
...|.+|++..|.+.. ........|..+..+.. ...+++.+.+.+......++++... +.++.++
T Consensus 27 ~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEa-----q~l~~~~ 94 (190)
T PRK04296 27 EERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEA-----QFLDKEQ 94 (190)
T ss_pred HHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEcc-----ccCCHHH
Confidence 3478888887664332 33344555544333222 1234444333221123344554555 3466777
Q ss_pred HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
+.++++.++..|+.+|+=.-..+|.-.. ......+....+.+..+.
T Consensus 95 v~~l~~~l~~~g~~vi~tgl~~~~~~~~----f~~~~~L~~~aD~V~~l~ 140 (190)
T PRK04296 95 VVQLAEVLDDLGIPVICYGLDTDFRGEP----FEGSPYLLALADKVTELK 140 (190)
T ss_pred HHHHHHHHHHcCCeEEEEecCcccccCc----CchHHHHHHhcCeEEEee
Confidence 8889999888998888766555544221 112234445555555443
No 450
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=33.23 E-value=2.1e+02 Score=26.23 Aligned_cols=47 Identities=11% Similarity=0.161 Sum_probs=29.3
Q ss_pred cCChhhHHHHHHHHHHHhCCCCE--EEEcCCCCcchhhhhhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIERYFPGAK--VLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
..+|+.++.++ ++... .|=+ +++|+..-...+.+++.+|++++.+|-
T Consensus 68 ~TSGNTGI~LA--~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 68 ATSGNTGIALA--MVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCChHHHHHH--HHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 55666667666 23222 4533 334444444567789999999999876
No 451
>PRK14705 glycogen branching enzyme; Provisional
Probab=33.10 E-value=48 Score=36.74 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=30.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
|++...++++++++++-|++.|+-||+|-++.++.
T Consensus 807 p~~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~ 841 (1224)
T PRK14705 807 PTSRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFP 841 (1224)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeccccCC
Confidence 34455679999999999999999999999998875
No 452
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=32.17 E-value=3.3e+02 Score=23.45 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=38.0
Q ss_pred hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 143 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 143 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
..++..|.+++..++ -|.+.|.+.++. ...++++..+.++. ..+..+.+++.|++.|+-.++
T Consensus 38 ~~l~~~g~~vv~~d~-------~~~~~l~~al~g---~d~v~~~~~~~~~~----~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 38 QQLQALGAEVVEADY-------DDPESLVAALKG---VDAVFSVTPPSHPS----ELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHTTTEEEES-T-------T-HHHHHHHHTT---CSEEEEESSCSCCC----HHHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhcccceEeeccc-------CCHHHHHHHHcC---CceEEeecCcchhh----hhhhhhhHHHhhhccccceEE
Confidence 345567887765554 277888888875 55555544433322 245578899999988765554
No 453
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=31.93 E-value=3.1e+02 Score=27.00 Aligned_cols=41 Identities=15% Similarity=-0.087 Sum_probs=31.9
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 220 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 220 (410)
.+++++-++.--..|.++++.--..++-+++.+++.+++=+
T Consensus 428 vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCC 468 (556)
T KOG1467|consen 428 VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCC 468 (556)
T ss_pred cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEe
Confidence 56777755555667899999888888888999999887643
No 454
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=31.40 E-value=1.3e+02 Score=28.12 Aligned_cols=77 Identities=16% Similarity=0.326 Sum_probs=51.6
Q ss_pred CCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 015283 136 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHI 215 (410)
Q Consensus 136 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 215 (410)
-.|++|.+.++.-...++++..... ...+-+...+.. .+.+++ .-|..+ +.++.++|.+.|+++| .
T Consensus 59 k~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~~---~K~VL~----EKPla~--n~~e~~~iveaA~~rg-v 124 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALNK---GKHVLC----EKPLAM--NVAEAEEIVEAAEARG-V 124 (351)
T ss_pred ccccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHHc---CCcEEe----cccccC--CHHHHHHHHHHHHHcC-c
Confidence 3789999999988888888876322 123333344443 223333 466654 5889999999999998 6
Q ss_pred ccccccCCCCC
Q 015283 216 PFFDVAYQGFA 226 (410)
Q Consensus 216 li~Deay~~~~ 226 (410)
.+.|..|.-+.
T Consensus 125 ~~meg~~~R~~ 135 (351)
T KOG2741|consen 125 FFMEGLWWRFF 135 (351)
T ss_pred EEEeeeeeecC
Confidence 77777765444
No 455
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=31.34 E-value=3.5e+02 Score=23.41 Aligned_cols=88 Identities=22% Similarity=0.277 Sum_probs=51.6
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCC-cchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW-GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
...+++ +.||..|..=+- ..+..|..|.+.+|.. +....+.+..+ +..+. ..++.+.+.
T Consensus 12 ~k~Vlv--vGgG~va~rKa~---~ll~~ga~v~Vvs~~~~~el~~~~~~~~--i~~~~------~~~~~~~~~------- 71 (210)
T COG1648 12 GKKVLV--VGGGSVALRKAR---LLLKAGADVTVVSPEFEPELKALIEEGK--IKWIE------REFDAEDLD------- 71 (210)
T ss_pred CCEEEE--ECCCHHHHHHHH---HHHhcCCEEEEEcCCccHHHHHHHHhcC--cchhh------cccChhhhc-------
Confidence 456777 788888877652 2356889999999988 33344444433 11111 112333332
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 216 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 216 (410)
...+++.++.+ .+.=+++.+.|+++++++
T Consensus 72 -~~~lviaAt~d--------~~ln~~i~~~a~~~~i~v 100 (210)
T COG1648 72 -DAFLVIAATDD--------EELNERIAKAARERRILV 100 (210)
T ss_pred -CceEEEEeCCC--------HHHHHHHHHHHHHhCCce
Confidence 23344433333 556688999999988765
No 456
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=30.65 E-value=51 Score=36.18 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.+|++++++-|+++|+-||.|-||.+.+
T Consensus 554 i~EfK~LV~alH~~GI~VILDVVyNHt~ 581 (1111)
T TIGR02102 554 IAEFKNLINEIHKRGMGVILDVVYNHTA 581 (1111)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 6899999999999999999999997654
No 457
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=30.39 E-value=81 Score=25.04 Aligned_cols=61 Identities=15% Similarity=0.100 Sum_probs=39.4
Q ss_pred CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHc--CCc-ccccccCCC
Q 015283 162 TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEK--NHI-PFFDVAYQG 224 (410)
Q Consensus 162 ~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~--~~~-li~Deay~~ 224 (410)
+...+++.+.+.+++. ....+++..|-|..|..-+..+ .+++++..++. ++. ..+||-|+.
T Consensus 35 ~~~~~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 35 NREKDIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCCCHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred CCchHHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 3456889999999883 4445555778888777655444 66666555543 544 567888664
No 458
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=29.77 E-value=61 Score=32.08 Aligned_cols=28 Identities=21% Similarity=0.208 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+.||+|-|+-+.+
T Consensus 80 ~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 80 KEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 9999999999999999999999976655
No 459
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=28.97 E-value=45 Score=22.28 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=21.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 222 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay 222 (410)
+..|++...+.++++++.+-..+.+.+.+.+..|
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEE
Confidence 3466778888999999988888888777777665
No 460
>PRK12568 glycogen branching enzyme; Provisional
Probab=28.40 E-value=62 Score=33.75 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=28.6
Q ss_pred CCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
..+.++++++++-|+++|+-||.|-++.++..
T Consensus 315 ~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~ 346 (730)
T PRK12568 315 HGSPDGFAQFVDACHRAGIGVILDWVSAHFPD 346 (730)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeccccCCc
Confidence 35689999999999999999999999987764
No 461
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=27.18 E-value=25 Score=23.93 Aligned_cols=24 Identities=21% Similarity=0.333 Sum_probs=19.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCC
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNH 214 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~ 214 (410)
.-|.|.+ +.+.++.|++++++|+.
T Consensus 15 ~~~~G~i-~~~~l~~la~ia~~yg~ 38 (69)
T PF03460_consen 15 RIPGGRI-SAEQLRALAEIAEKYGD 38 (69)
T ss_dssp B-GGGEE-EHHHHHHHHHHHHHHST
T ss_pred eCCCEEE-CHHHHHHHHHHHHHhCC
Confidence 3455665 89999999999999974
No 462
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=26.89 E-value=1.4e+02 Score=24.06 Aligned_cols=67 Identities=16% Similarity=0.069 Sum_probs=45.9
Q ss_pred ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283 102 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 102 ~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
++++ ..|.|=.+..+..++..+.++..+++..|+=+.+.+.+..+|...+.--. -.|.+.+.+.+.+
T Consensus 64 D~vi--iTGsTlvN~Ti~~iL~~~~~~~~vil~GpS~~~~P~~l~~~Gv~~v~g~~------v~d~~~~~~~i~~ 130 (147)
T PF04016_consen 64 DVVI--ITGSTLVNGTIDDILELARNAREVILYGPSAPLHPEALFDYGVTYVGGSR------VVDPEKVLRAISE 130 (147)
T ss_dssp SEEE--EECHHCCTTTHHHHHHHTTTSSEEEEESCCGGS-GGGGCCTT-SEEEEEE------ES-HHHHHHHHCT
T ss_pred CEEE--EEeeeeecCCHHHHHHhCccCCeEEEEecCchhhHHHHHhCCCCEEEEEE------EeCHHHHHHHHHc
Confidence 3444 46676666666667877777899999999988888888888876554322 1377888888766
No 463
>PRK04148 hypothetical protein; Provisional
Probab=26.84 E-value=3.3e+02 Score=21.67 Aligned_cols=20 Identities=10% Similarity=-0.002 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHcCCcccc
Q 015283 199 PEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~ 218 (410)
++-...|++++++.|+-+++
T Consensus 88 ~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 88 RDLQPFILELAKKINVPLII 107 (134)
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 66788899999999876654
No 464
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=26.57 E-value=4.1e+02 Score=24.03 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=20.2
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHH-cCCcccccc
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDV 220 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~De 220 (410)
++.++|. .||..++.+.+++|+ +. .++.=|=|.
T Consensus 125 ~iYn~P~-~tg~~l~~~~l~~L~---~~~p~vvgiK~s 158 (279)
T cd00953 125 FIYNYPK-ATGYDINARMAKEIK---KAGGDIIGVKDT 158 (279)
T ss_pred EEEeCcc-ccCCCCCHHHHHHHH---hcCCCEEEEEeC
Confidence 3434442 389999988877774 43 355555554
No 465
>KOG4132 consensus Uroporphyrinogen III synthase UROS/HEM4 [Coenzyme transport and metabolism]
Probab=26.35 E-value=81 Score=27.41 Aligned_cols=50 Identities=2% Similarity=-0.118 Sum_probs=35.7
Q ss_pred CCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283 137 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189 (410)
Q Consensus 137 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p 189 (410)
....|...++.+|.+.+.||.. ...-.+++++.+.++.. ++-.-+|+.+|
T Consensus 15 ~~D~Y~~~l~~~~~epifIP~l--~f~f~~l~~lr~kL~~p-~kY~giIfTSp 64 (260)
T KOG4132|consen 15 PIDPYEEELRSYGLEPIFIPVL--SFTFVNLQQLRAKLNNP-PKYAGIIFTSP 64 (260)
T ss_pred CCCHHHHHHHhcCCCceeecce--eeeeccHHHHHHHhcCc-hhhceeEEeCh
Confidence 5678999999999999999983 33345788998888763 33444454444
No 466
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=26.09 E-value=6.2e+02 Score=24.63 Aligned_cols=52 Identities=12% Similarity=0.149 Sum_probs=24.6
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH----HcCCccccccc
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ----EKNHIPFFDVA 221 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~----~~~~~li~Dea 221 (410)
+.+++...+.+..+...+++ ..|.... .+...+.++.++.. ....++|++..
T Consensus 286 ~~~~l~~~l~~~~~~DlVlI-Dt~G~~~---~d~~~~~~L~~ll~~~~~~~~~~LVl~a~ 341 (424)
T PRK05703 286 DPKELAKALEQLRDCDVILI-DTAGRSQ---RDKRLIEELKALIEFSGEPIDVYLVLSAT 341 (424)
T ss_pred CHHhHHHHHHHhCCCCEEEE-eCCCCCC---CCHHHHHHHHHHHhccCCCCeEEEEEECC
Confidence 33555555554334455555 4443322 22333444444444 22456676665
No 467
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=25.76 E-value=5.5e+02 Score=23.95 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=15.6
Q ss_pred CCCEEEEcCCCCcchhhhhhhCCCCccce
Q 015283 127 PGAKVLISSPTWGNHKNIFNDARVPWSEY 155 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v 155 (410)
.|..++..++........++..|..+..+
T Consensus 82 ~g~~~vyId~E~~~~~~~a~~lGvd~~~l 110 (325)
T cd00983 82 LGGTVAFIDAEHALDPVYAKKLGVDLDNL 110 (325)
T ss_pred cCCCEEEECccccHHHHHHHHcCCCHHHh
Confidence 55566666555544445555556554443
No 468
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=25.73 E-value=4.9e+02 Score=23.41 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=44.4
Q ss_pred CEEEEcCCCCcc---hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCC-HHHHHH
Q 015283 129 AKVLISSPTWGN---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT-PEQWEK 204 (410)
Q Consensus 129 d~Vl~~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~-~~~l~~ 204 (410)
|.|++++--+.. +...++.+|...+.+-. .. ...+.++...+. -...+++++ ....||.--. .+++++
T Consensus 121 dgviipDLP~ee~~~~~~~~~~~gi~~I~lv~--Pt---T~~eri~~i~~~--a~gFIY~vS-~~GvTG~~~~~~~~~~~ 192 (263)
T CHL00200 121 KGLIIPDLPYEESDYLISVCNLYNIELILLIA--PT---SSKSRIQKIARA--APGCIYLVS-TTGVTGLKTELDKKLKK 192 (263)
T ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC--CC---CCHHHHHHHHHh--CCCcEEEEc-CCCCCCCCccccHHHHH
Confidence 888888855533 34455677766655422 22 234555555544 123445444 4556776322 245777
Q ss_pred HHHHHHHc-CCccc
Q 015283 205 IADVIQEK-NHIPF 217 (410)
Q Consensus 205 i~~~~~~~-~~~li 217 (410)
+++.++++ +..+.
T Consensus 193 ~i~~ir~~t~~Pi~ 206 (263)
T CHL00200 193 LIETIKKMTNKPII 206 (263)
T ss_pred HHHHHHHhcCCCEE
Confidence 77777765 44444
No 469
>PRK08265 short chain dehydrogenase; Provisional
Probab=25.53 E-value=4.6e+02 Score=23.03 Aligned_cols=48 Identities=15% Similarity=-0.018 Sum_probs=25.5
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
+.||++.+-.. +.. ....|-.|++.+-.-.......+..+.++..++.
T Consensus 11 ItGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 59 (261)
T PRK08265 11 VTGGATLIGAA--VARALVAAGARVAIVDIDADNGAAVAASLGERARFIAT 59 (261)
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEe
Confidence 46777777665 233 2447888887654332233333344544544444
No 470
>PLN00196 alpha-amylase; Provisional
Probab=25.44 E-value=65 Score=31.36 Aligned_cols=29 Identities=10% Similarity=0.117 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
+.++++++++-|+++|+-||.|-|.-+.+
T Consensus 90 t~~elk~Lv~~aH~~GIkVilDvV~NH~~ 118 (428)
T PLN00196 90 NEAQLKSLIEAFHGKGVQVIADIVINHRT 118 (428)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCcc
Confidence 38999999999999999999999976655
No 471
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=25.34 E-value=6.1e+02 Score=24.34 Aligned_cols=53 Identities=8% Similarity=0.194 Sum_probs=27.7
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCC-CCCCCCCCCHHHHHHHHHHHHH----cCCcccccccCC
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQE----KNHIPFFDVAYQ 223 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p-~NPtG~~~~~~~l~~i~~~~~~----~~~~li~Deay~ 223 (410)
+.+++.+.+........+++ ..+ .++. ....+.++.++... ...++|+|....
T Consensus 241 ~~~~l~~~L~~~~~~DlVLI-DTaGr~~~----~~~~l~el~~~l~~~~~~~e~~LVlsat~~ 298 (388)
T PRK12723 241 SFKDLKEEITQSKDFDLVLV-DTIGKSPK----DFMKLAEMKELLNACGRDAEFHLAVSSTTK 298 (388)
T ss_pred cHHHHHHHHHHhCCCCEEEE-cCCCCCcc----CHHHHHHHHHHHHhcCCCCeEEEEEcCCCC
Confidence 45666665554434555555 444 3332 23334455444442 257788888743
No 472
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=25.18 E-value=5.4e+02 Score=23.66 Aligned_cols=105 Identities=16% Similarity=0.048 Sum_probs=63.6
Q ss_pred CceEEEecCChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCC--CCccceeeecCCCcccChhhHHHHHhcC
Q 015283 101 QRVATVQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDAR--VPWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 101 ~~i~~~~t~ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
..++. +-|+|+-+-.- +.+.+. -|..|++|--+-.-+..-++.+| .++...+.+ . .|.+.+.+..+.
T Consensus 61 GiVaT--VFGAtGFlGry--vvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd-~----~DedSIr~vvk~- 130 (391)
T KOG2865|consen 61 GIVAT--VFGATGFLGRY--VVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFD-L----RDEDSIRAVVKH- 130 (391)
T ss_pred ceEEE--EecccccccHH--HHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccC-C----CCHHHHHHHHHh-
Confidence 45555 66777765543 344444 78999998755554444555555 255555542 1 377888888875
Q ss_pred CCCcEEEEeCCCCCCCCCC----CCHHHHHHHHHHHHHcCCccc
Q 015283 178 PGGSFILLHGCAHNPTGID----PTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~----~~~~~l~~i~~~~~~~~~~li 217 (410)
..++|=+-.-..+|+.. ....--++|+.+|++-|+-=+
T Consensus 131 --sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerf 172 (391)
T KOG2865|consen 131 --SNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERF 172 (391)
T ss_pred --CcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhhe
Confidence 44544454557777742 123336788999998776433
No 473
>COG1204 Superfamily II helicase [General function prediction only]
Probab=25.11 E-value=2.4e+02 Score=29.89 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=32.2
Q ss_pred CceEE-EecCChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhh------hhhhCCCCccce
Q 015283 101 QRVAT-VQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKN------IFNDARVPWSEY 155 (410)
Q Consensus 101 ~~i~~-~~t~ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~------~~~~~g~~~~~v 155 (410)
+|+++ .+|.+|-..+..++ +++.+. .|.+++...|.-.-..+ -++.+|.++...
T Consensus 48 ~N~li~aPTgsGKTlIA~la-i~~~l~~~~~k~vYivPlkALa~Ek~~~~~~~~~~GirV~~~ 109 (766)
T COG1204 48 ENVLISAPTGSGKTLIALLA-ILSTLLEGGGKVVYIVPLKALAEEKYEEFSRLEELGIRVGIS 109 (766)
T ss_pred CcEEEEcCCCCchHHHHHHH-HHHHHHhcCCcEEEEeChHHHHHHHHHHhhhHHhcCCEEEEe
Confidence 56555 77888877777764 344444 45788877775432222 234566666554
No 474
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=24.58 E-value=4.9e+02 Score=23.00 Aligned_cols=73 Identities=12% Similarity=0.159 Sum_probs=47.0
Q ss_pred hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccc
Q 015283 141 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 220 (410)
Q Consensus 141 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 220 (410)
|.+++..-+.+-+-+. ..-+|-+.+..|..++.+ .+.+.++-+ |-+|. ..+++++.+|++-+++-.
T Consensus 93 y~DILD~K~L~eIVVn--~RIdWL~HfSALLSAvGE-~NVpLA~~V----NI~Gv-------HNil~vAa~~kL~iFVPS 158 (366)
T KOG2774|consen 93 YLDILDQKSLEEIVVN--KRIDWLVHFSALLSAVGE-TNVPLALQV----NIRGV-------HNILQVAAKHKLKVFVPS 158 (366)
T ss_pred hhhhhccccHHHhhcc--cccceeeeHHHHHHHhcc-cCCceeeee----cchhh-------hHHHHHHHHcCeeEeecc
Confidence 3445554444333332 244677778888887765 233343333 55654 789999999999999988
Q ss_pred cCCCCCC
Q 015283 221 AYQGFAS 227 (410)
Q Consensus 221 ay~~~~~ 227 (410)
.-..|+.
T Consensus 159 TIGAFGP 165 (366)
T KOG2774|consen 159 TIGAFGP 165 (366)
T ss_pred cccccCC
Confidence 8777774
No 475
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=24.36 E-value=79 Score=32.93 Aligned_cols=30 Identities=13% Similarity=0.289 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
+.++++++++-|++.|+-||.|-||-+.+.
T Consensus 243 ~~~efk~LV~~~H~~GI~VIlDvV~NHt~~ 272 (688)
T TIGR02100 243 QVAEFKTMVRALHDAGIEVILDVVYNHTAE 272 (688)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCccC
Confidence 589999999999999999999999876653
No 476
>PRK13760 putative RNA-associated protein; Provisional
Probab=24.24 E-value=2.5e+02 Score=24.66 Aligned_cols=66 Identities=12% Similarity=0.201 Sum_probs=38.5
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEc
Q 015283 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMT 380 (410)
Q Consensus 301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 380 (410)
.++..+|..+++ +-.-++.++.+.+.+..+...+. +. ++.|+++. +.++..++..|++.++.+.
T Consensus 74 ~i~~~IL~kGei----Qlt~~eR~~~~e~k~r~Ii~~Ia-~~-------~vnP~T~~----P~p~~rIE~Am~e~~~~id 137 (231)
T PRK13760 74 EIAEEIIKKGEI----QLTAEQRREMLEEKRRQIINFIA-RN-------AINPQTGL----PHPPQRIENAMEEARVHID 137 (231)
T ss_pred HHHHHHHhcCCc----cCCHHHHHHHHHHHHHHHHHHHH-Hh-------ccCCCCCC----CCCHHHHHHHHHhcCcccC
Confidence 556777776654 22234566667777777777776 43 23343331 3355566666666666666
Q ss_pred CC
Q 015283 381 KD 382 (410)
Q Consensus 381 ~~ 382 (410)
|.
T Consensus 138 p~ 139 (231)
T PRK13760 138 PF 139 (231)
T ss_pred CC
Confidence 63
No 477
>TIGR03793 TOMM_pelo TOMM propeptide domain. This model represents a domain that is conserved among a large number of putative thiazole/oxazole-modified microcins (TOMM). Oddly, most of this seqence region appears homologous to nitrile hydratase subunits. This family is expanded especially in Pelotomaculum thermopropionicum SI.
Probab=24.23 E-value=1.3e+02 Score=21.19 Aligned_cols=24 Identities=29% Similarity=0.333 Sum_probs=18.5
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
..+-+++ |.+|.| -+|.++|.+++
T Consensus 52 ~~~~lVl--P~~P~~-~lse~~L~~va 75 (77)
T TIGR03793 52 TVLYLVL--PVNPDI-ELTDEQLDAVA 75 (77)
T ss_pred CeEEEEe--cCCCCC-CCCHHHHHHhh
Confidence 4455555 999999 89999998874
No 478
>PF04019 DUF359: Protein of unknown function (DUF359); InterPro: IPR007164 This is family of archaebacterial proteins, which are about 170 amino acids in length. They have no known function. The most conserved portion of the protein contains the sequence GEEDL that may be important for its function.
Probab=24.03 E-value=2.8e+02 Score=21.60 Aligned_cols=31 Identities=32% Similarity=0.411 Sum_probs=20.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHH-HcCCccccccc
Q 015283 190 HNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVA 221 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~-~~~~~li~Dea 221 (410)
.||-|. ++.+-+..|.+... ..+..|++|.=
T Consensus 40 ~NPpG~-It~el~~ai~~a~~~~~~~~I~V~GE 71 (121)
T PF04019_consen 40 KNPPGT-ITEELIEAIKKALESGKPVVIFVDGE 71 (121)
T ss_pred ECCCCc-ccHHHHHHHHHHHhCCCCEEEEEeCh
Confidence 488888 55666777777763 34666666643
No 479
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=23.94 E-value=2.6e+02 Score=25.20 Aligned_cols=121 Identities=12% Similarity=0.004 Sum_probs=59.0
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC--CEEEEcC--CCCcch--hhhhhhCCCCc
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGNH--KNIFNDARVPW 152 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g--d~Vl~~~--p~y~~~--~~~~~~~g~~~ 152 (410)
....++.+++...... .....++ |.|-+..+..+ +......| =+|++.+ |.+.+. ...+...|.++
T Consensus 90 ~~~~~~~I~~~~~~~I----~~~~~IL--T~~~S~~v~~~--l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v 161 (282)
T PF01008_consen 90 IEQAREKIADHASELI----NDGDTIL--THGYSSTVERF--LLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPV 161 (282)
T ss_dssp HHHHHHHHHHHHHCCC-----TTEEEE--EES--SHHHHH--HHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EE
T ss_pred HHHHHHHHHHHHHHhc----cCCeEEE--EeCCchHHHHH--HHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeE
Confidence 3445555665544332 2345555 78877777665 33333344 3566655 655542 22333456555
Q ss_pred cceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccc
Q 015283 153 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 219 (410)
Q Consensus 153 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 219 (410)
..++ | ..+-..+.+ +-+++++-...--+.|.+.++.-=..++-.|+.+++.+++=
T Consensus 162 ~~i~---------d-~~~~~~m~~--~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 162 TLIP---------D-SAVGYVMPR--DVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp EEE----------G-GGHHHHHHC--TESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred EEEe---------c-hHHHHHHHH--hCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 4443 2 344444442 14555553333344555555555566777888888877654
No 480
>TIGR00291 RNA_SBDS rRNA metabolism protein, SBDS family. This protein family, possibly universal in both archaea and eukaryotes, appears to be involved in (ribosomal) RNA metabolism. Mutations in the human ortholog are associated with Shwachman-Bodian-Diamond syndrome.
Probab=23.78 E-value=2.5e+02 Score=24.66 Aligned_cols=66 Identities=9% Similarity=0.083 Sum_probs=36.5
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEc
Q 015283 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMT 380 (410)
Q Consensus 301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 380 (410)
.++..+|..+++. -.-++.+..+.+.+..+...+. +. ++.|+++. +.++..++..|++.++.+.
T Consensus 74 ei~~~IL~kGeiQ----ls~~eR~~~~e~k~~~Ii~~Ia-~~-------~VnP~T~~----P~p~~rIE~Am~e~~~~id 137 (231)
T TIGR00291 74 EVAEKIILKGEIQ----LTAEQRREMLEKKRNQIINIIS-RN-------TINPQTKK----PHPPTRIEKALEEAKVHID 137 (231)
T ss_pred HHHHHHHhcCCcc----CCHHHHHHHHHHHHHHHHHHHH-Hh-------CcCCCCCC----CCCHHHHHHHHHhcCcCcC
Confidence 5566777766541 2224556666777777777776 33 23333321 2245556666666666666
Q ss_pred CC
Q 015283 381 KD 382 (410)
Q Consensus 381 ~~ 382 (410)
|.
T Consensus 138 p~ 139 (231)
T TIGR00291 138 IF 139 (231)
T ss_pred CC
Confidence 53
No 481
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=23.36 E-value=4.5e+02 Score=23.56 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=23.4
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
+++.++++++. +|. ..++.++++.|+++|+.+|.
T Consensus 174 ~~~Dv~I~iS~----sg~---~~~~~~~~~~ak~~ga~iI~ 207 (278)
T PRK11557 174 SPDDLLLAISY----SGE---RRELNLAADEALRVGAKVLA 207 (278)
T ss_pred CCCCEEEEEcC----CCC---CHHHHHHHHHHHHcCCCEEE
Confidence 34677777633 444 56788888999999776654
No 482
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=23.30 E-value=1.3e+02 Score=26.05 Aligned_cols=50 Identities=14% Similarity=-0.031 Sum_probs=32.3
Q ss_pred hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
++.+++.++. ...++.+=.-+..+-.. .+..+++.++|++|++.+|+++-
T Consensus 24 ~~~ve~al~~---Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALKG---GVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHhC---CCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCc
Confidence 6778888875 44444432222222111 45568899999999999998876
No 483
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=23.30 E-value=3.4e+02 Score=20.73 Aligned_cols=32 Identities=13% Similarity=0.210 Sum_probs=20.6
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 217 (410)
+...+++++ .+|. ..++.++++.|+++|+.+|
T Consensus 60 ~~~~~i~iS----~~g~---~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 60 PGDVVIAIS----FSGE---TKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CCCEEEEEe----CCCC---CHHHHHHHHHHHHcCCeEE
Confidence 356666663 3444 3567788888998876543
No 484
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=23.27 E-value=2.5e+02 Score=23.30 Aligned_cols=80 Identities=16% Similarity=0.165 Sum_probs=46.2
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC-cEE-EEeccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELL-VAQSYSKNLG 258 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i-~~~S~sK~~~ 258 (410)
.+.+- -+..||| .++-+++-++++-+..-.++++.|+. ...+.+ .....+.......+ .++ .+.=.|++.+
T Consensus 25 gRCIS-~S~GNPT--~lsG~elV~lIk~a~~DPV~VMfDD~-G~~g~G---~GE~Al~~v~~h~~IeVLG~iAVASnT~~ 97 (180)
T PF14097_consen 25 GRCIS-QSAGNPT--PLSGEELVELIKQAPHDPVLVMFDDK-GFIGEG---PGEQALEYVANHPDIEVLGAIAVASNTHG 97 (180)
T ss_pred cEEEe-ccCCCCC--cCCHHHHHHHHHhCCCCCEEEEEeCC-CCCCCC---ccHHHHHHHHcCCCceEEEEEEEEecCCC
Confidence 34444 5568888 45577888888777767888999998 444433 22234444443332 121 1233456665
Q ss_pred ccCCCcceE
Q 015283 259 LYAERIGAM 267 (410)
Q Consensus 259 ~~G~r~G~l 267 (410)
..|.|+=+-
T Consensus 98 ~~g~~VD~s 106 (180)
T PF14097_consen 98 AEGTKVDVS 106 (180)
T ss_pred CCceEeEEE
Confidence 677777664
No 485
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=23.26 E-value=3.1e+02 Score=21.53 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=35.8
Q ss_pred ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHH-cCC-cccccccCC
Q 015283 164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQE-KNH-IPFFDVAYQ 223 (410)
Q Consensus 164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~-~~~-~li~Deay~ 223 (410)
..+++.+.+.+++. ....+++.-|-|..|..-+... .+++++..++ +++ +.++||-|+
T Consensus 34 ~~~~~~l~~~i~~~--~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 34 EPDWSRIEELLKEW--TPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred cHHHHHHHHHHHHc--CCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 35678888888874 3344555889898888655443 4555544433 343 456677754
No 486
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=23.26 E-value=3.3e+02 Score=25.09 Aligned_cols=106 Identities=12% Similarity=0.058 Sum_probs=54.9
Q ss_pred CChhhHHHHHHHHHHH-hC--CCCEEEEcC-CCCcchhhhhhh-CC-CCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283 109 LSGTGSLRLAAALIER-YF--PGAKVLISS-PTWGNHKNIFND-AR-VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 182 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~-~~--~gd~Vl~~~-p~y~~~~~~~~~-~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 182 (410)
.||.|-+-.. +.+. +. +.++|++.+ .+|.+....+.. .+ .+...+.. + --|.+.+.+.+.+.+...+
T Consensus 6 TGGaGFIGsn--fvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~---D--I~D~~~v~~~~~~~~~D~V 78 (340)
T COG1088 6 TGGAGFIGSN--FVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQG---D--ICDRELVDRLFKEYQPDAV 78 (340)
T ss_pred ecCcchHHHH--HHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEec---c--ccCHHHHHHHHHhcCCCeE
Confidence 5666655554 3332 22 445566544 799877665542 22 24444433 1 1356677777775322221
Q ss_pred EEE--eCC----C--------CCCCCCCCCHHHHHHHHHHHHHcCC-----cccccccCCCCCCC
Q 015283 183 ILL--HGC----A--------HNPTGIDPTPEQWEKIADVIQEKNH-----IPFFDVAYQGFASG 228 (410)
Q Consensus 183 ~ii--~~~----p--------~NPtG~~~~~~~l~~i~~~~~~~~~-----~li~Deay~~~~~~ 228 (410)
+=+ -++ . .|-.|+ -.|.+.++++.. .|=-||+|.++..+
T Consensus 79 vhfAAESHVDRSI~~P~~Fi~TNv~GT-------~~LLEaar~~~~~frf~HISTDEVYG~l~~~ 136 (340)
T COG1088 79 VHFAAESHVDRSIDGPAPFIQTNVVGT-------YTLLEAARKYWGKFRFHHISTDEVYGDLGLD 136 (340)
T ss_pred EEechhccccccccChhhhhhcchHHH-------HHHHHHHHHhcccceEEEeccccccccccCC
Confidence 111 011 1 223333 346666787763 45579999988754
No 487
>PRK10785 maltodextrin glucosidase; Provisional
Probab=22.93 E-value=78 Score=32.36 Aligned_cols=31 Identities=6% Similarity=0.067 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.+.+++++|++-|+++|+-||+|-|+.+.+.
T Consensus 223 Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~ 253 (598)
T PRK10785 223 GGDAALLRLRHATQQRGMRLVLDGVFNHTGD 253 (598)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCCcCCC
Confidence 3578999999999999999999999876653
No 488
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=22.84 E-value=1.4e+02 Score=26.29 Aligned_cols=54 Identities=6% Similarity=-0.175 Sum_probs=35.5
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
+.+..+++.++...+..-.+= -..-|-.+++.+-+++.+++|++||+.+..-..
T Consensus 9 l~~~~~~d~Le~~g~yID~lK---fg~Gt~~l~~~~~l~eki~la~~~~V~v~~GGt 62 (237)
T TIGR03849 9 LPPKFVEDYLKVCGDYITFVK---FGWGTSALIDRDIVKEKIEMYKDYGIKVYPGGT 62 (237)
T ss_pred CCHHHHHHHHHHhhhheeeEE---ecCceEeeccHHHHHHHHHHHHHcCCeEeCCcc
Confidence 455666666655433333333 235566777788899999999999998766653
No 489
>PRK06483 dihydromonapterin reductase; Provisional
Probab=22.72 E-value=4.9e+02 Score=22.28 Aligned_cols=27 Identities=22% Similarity=0.156 Sum_probs=16.0
Q ss_pred cCChhhHHHHHHHHHHH-hCCCCEEEEcCC
Q 015283 108 GLSGTGSLRLAAALIER-YFPGAKVLISSP 136 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p 136 (410)
+.|+++++-.. +... ...|.+|++...
T Consensus 7 ItGas~gIG~~--ia~~l~~~G~~V~~~~r 34 (236)
T PRK06483 7 ITGAGQRIGLA--LAWHLLAQGQPVIVSYR 34 (236)
T ss_pred EECCCChHHHH--HHHHHHHCCCeEEEEeC
Confidence 36666666655 2222 347888877653
No 490
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=22.66 E-value=5.5e+02 Score=22.84 Aligned_cols=93 Identities=20% Similarity=0.215 Sum_probs=46.9
Q ss_pred ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCC-CCcchhhhhhhCCCCccceeeecCCCccc-ChhhHHHHHhcCCC
Q 015283 102 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSP-TWGNHKNIFNDARVPWSEYRYYDPKTVGL-DFEGMIADIKAAPG 179 (410)
Q Consensus 102 ~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p-~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~l~~~i~~~~~ 179 (410)
+|++ ..|++++-.++..+ ...|. |+++-- .|.. ...........+. .+.+ |.+.+++.+.+ .
T Consensus 2 ~ILv--lgGTtE~r~la~~L---~~~g~-v~~sv~t~~g~---~~~~~~~~~~~v~-----~G~lg~~~~l~~~l~~--~ 65 (249)
T PF02571_consen 2 KILV--LGGTTEGRKLAERL---AEAGY-VIVSVATSYGG---ELLKPELPGLEVR-----VGRLGDEEGLAEFLRE--N 65 (249)
T ss_pred EEEE--EechHHHHHHHHHH---HhcCC-EEEEEEhhhhH---hhhccccCCceEE-----ECCCCCHHHHHHHHHh--C
Confidence 3566 67778888886322 33555 554322 2221 1111110111222 2336 88888888876 3
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 216 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 216 (410)
...+++- ..+|.-..+ =+.+.+.|++.|+..
T Consensus 66 ~i~~vID--ATHPfA~~i----s~na~~a~~~~~ipy 96 (249)
T PF02571_consen 66 GIDAVID--ATHPFAAEI----SQNAIEACRELGIPY 96 (249)
T ss_pred CCcEEEE--CCCchHHHH----HHHHHHHHhhcCcce
Confidence 4555552 334543322 345677788877754
No 491
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=22.61 E-value=5.2e+02 Score=22.56 Aligned_cols=103 Identities=12% Similarity=0.075 Sum_probs=0.0
Q ss_pred eEEEecCChhhHHHHHHHHHHH-----------hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHH
Q 015283 103 VATVQGLSGTGSLRLAAALIER-----------YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 103 i~~~~t~ggt~a~~~~~~~~~~-----------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 171 (410)
+++ .+||-.+..++...+.. -..+|....-.|.-......++.+|..++.... .....-..+++.
T Consensus 4 ~aL--~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~--~g~~e~eve~L~ 79 (223)
T COG2102 4 IAL--YSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDT--SGEEEREVEELK 79 (223)
T ss_pred EEE--EecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEec--CccchhhHHHHH
Q ss_pred HHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 172 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
+.+.. =+.-.++ +|.+.+..+...+-.+|++-|+-++.
T Consensus 80 ~~l~~--l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~ 117 (223)
T COG2102 80 EALRR--LKVDGIV-------AGAIASEYQKERVERLCEELGLKVYA 117 (223)
T ss_pred HHHHh--CcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee
No 492
>PRK06988 putative formyltransferase; Provisional
Probab=22.52 E-value=5.3e+02 Score=23.83 Aligned_cols=76 Identities=14% Similarity=0.068 Sum_probs=43.6
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc-cccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF-DVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~-Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
....|+.++.. ...++.++++|.+|.+.... ..+.++|.++|+.++. ++. . +......+....
T Consensus 14 a~~~L~~L~~~--~~~i~~Vvt~~d~~~~~~~~----~~v~~~A~~~gip~~~~~~~----~------~~~~~~~l~~~~ 77 (312)
T PRK06988 14 GVRCLQVLLAR--GVDVALVVTHEDNPTENIWF----GSVAAVAAEHGIPVITPADP----N------DPELRAAVAAAA 77 (312)
T ss_pred HHHHHHHHHhC--CCCEEEEEcCCCCCccCcCC----CHHHHHHHHcCCcEEccccC----C------CHHHHHHHHhcC
Confidence 44556666654 24455566888778764222 2466679999998764 221 0 111222333445
Q ss_pred CcEEEEecccccc
Q 015283 245 MELLVAQSYSKNL 257 (410)
Q Consensus 245 ~~~i~~~S~sK~~ 257 (410)
.+++++.++++.+
T Consensus 78 ~Dliv~~~~~~ii 90 (312)
T PRK06988 78 PDFIFSFYYRHMI 90 (312)
T ss_pred CCEEEEehhcccc
Confidence 5788888887765
No 493
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=22.51 E-value=70 Score=23.25 Aligned_cols=22 Identities=27% Similarity=0.039 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHcCCccccccc
Q 015283 200 EQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~Dea 221 (410)
+--++|++.|++||+.+..|..
T Consensus 32 ~iAe~II~~Ake~~Vpi~edp~ 53 (92)
T COG2257 32 EIAEKIIEKAKEHGVPIQEDPL 53 (92)
T ss_pred HHHHHHHHHHHHcCCCcccCHH
Confidence 3457899999999999988876
No 494
>PLN00191 enolase
Probab=22.46 E-value=5.9e+02 Score=25.10 Aligned_cols=84 Identities=10% Similarity=0.014 Sum_probs=49.6
Q ss_pred CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 015283 129 AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV 208 (410)
Q Consensus 129 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~ 208 (410)
+-+.+.+|....-...+...-.+ ..+|+.-++.+..+++.+++.+... -...+.+ =-|-.|. ..+..+++++
T Consensus 312 ~I~~IEDPl~~~D~eg~~~Lt~~-~~ipIvgDE~~vtn~~~l~~~I~~~-aad~i~i---Kl~qiGG---ITea~~~a~l 383 (457)
T PLN00191 312 PIVSIEDPFDQDDWEHWAKLTSL-EDVQIVGDDLLVTNPKRVAKAIQEK-ACNALLL---KVNQIGT---VTESIEAVKM 383 (457)
T ss_pred CcEEEECCCCcccHHHHHHHHcc-CCCcEEccCcccCCHHHHHHHHHhC-CCCEEEe---cccccCC---HHHHHHHHHH
Confidence 56788889754333333322111 3344433343445788888888762 1223222 1244555 7888999999
Q ss_pred HHHcCCcccccc
Q 015283 209 IQEKNHIPFFDV 220 (410)
Q Consensus 209 ~~~~~~~li~De 220 (410)
|+++|+.+++-.
T Consensus 384 A~~~G~~~~ish 395 (457)
T PLN00191 384 SKAAGWGVMTSH 395 (457)
T ss_pred HHHCCCEEEeCC
Confidence 999999887643
No 495
>COG1909 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.19 E-value=2.9e+02 Score=22.75 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=21.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHc-CCccccccc
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEK-NHIPFFDVA 221 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~Dea 221 (410)
..||-|. ++.+-++.|.+.+... ...+++|.=
T Consensus 84 V~NpPGt-It~el~~ai~~a~~~~k~~~I~V~GE 116 (167)
T COG1909 84 VRNPPGT-ITFELIKAIEKALEDGKRVRIFVDGE 116 (167)
T ss_pred EeCCCcE-eEHHHHHHHHHHHhcCCcEEEEEeCh
Confidence 4688887 5677788887776654 345555543
No 496
>PF00154 RecA: recA bacterial DNA recombination protein; InterPro: IPR013765 The recA gene product is a multifunctional enzyme that plays a role in homologous recombination, DNA repair and induction of the SOS response []. In homologous recombination, the protein functions as a DNA-dependent ATPase, promoting synapsis, heteroduplex formation and strand exchange between homologous DNAs []. RecA also acts as a protease cofactor that promotes autodigestion of the lexA product and phage repressors. The proteolytic inactivation of the lexA repressor by an activated form of recA may cause a derepression of the 20 or so genes involved in the SOS response, which regulates DNA repair, induced mutagenesis, delayed cell division and prophage induction in response to DNA damage []. RecA is a protein of about 350 amino-acid residues. Its sequence is very well conserved [, , ] among eubacterial species. It is also found in the chloroplast of plants []. RecA-like proteins are found in archaea and diverse eukaryotic organisms, like fission yeast, mouse or human. In the filament visualised by X-ray crystallography, beta-strand 3, the loop C-terminal to beta-strand 2, and alpha-helix D of the core domain form one surface that packs against alpha-helix A and beta-strand 0 (the N-terminal domain) of an adjacent monomer during polymerisation []. The core ATP-binding site domain is well conserved, with 14 invariant residues. It contains the nucleotide binding loop between beta-strand 1 and alpha-helix C. The Escherichia coli sequence GPESSGKT matches the consensus sequence of amino acids (G/A)XXXXGK(T/S) for the Walker A box (also referred to as the P-loop) found in a number of nucleoside triphosphate (NTP)-binding proteins. Another nucleotide binding motif, the Walker B box is found at beta-strand 4 in the RecA structure. The Walker B box is characterised by four hydrophobic amino acids followed by an acidic residue (usually aspartate). Nucleotide specificity and additional ATP binding interactions are contributed by the amino acid residues at beta-strand 2 and the loop C-terminal to that strand, all of which are greater than 90% conserved among bacterial RecA proteins.; GO: 0003697 single-stranded DNA binding, 0005524 ATP binding, 0006281 DNA repair; PDB: 2IN0_A 1MO3_A 3IFJ_A 2IN8_A 2IMZ_B 1G18_A 1MO4_A 3IGD_A 2L8L_A 2IN9_A ....
Probab=22.05 E-value=2.5e+02 Score=26.13 Aligned_cols=67 Identities=13% Similarity=0.025 Sum_probs=31.0
Q ss_pred ChhhHHHHHHHHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283 110 SGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
.+++-..++..+++.+. .|..++..++.+......++..|..+..+-+..++....-++..+.+++.
T Consensus 62 ~ssGKttLaL~~ia~~q~~g~~~a~ID~e~~ld~~~a~~lGvdl~rllv~~P~~~E~al~~~e~lirs 129 (322)
T PF00154_consen 62 ESSGKTTLALHAIAEAQKQGGICAFIDAEHALDPEYAESLGVDLDRLLVVQPDTGEQALWIAEQLIRS 129 (322)
T ss_dssp TTSSHHHHHHHHHHHHHHTT-EEEEEESSS---HHHHHHTT--GGGEEEEE-SSHHHHHHHHHHHHHT
T ss_pred CCCchhhhHHHHHHhhhcccceeEEecCcccchhhHHHhcCccccceEEecCCcHHHHHHHHHHHhhc
Confidence 33444444433444443 66777777777777777777778766655443333222223334444444
No 497
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=22.03 E-value=4.1e+02 Score=23.19 Aligned_cols=86 Identities=16% Similarity=0.152 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEc
Q 015283 55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLIS 134 (410)
Q Consensus 55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~ 134 (410)
+.+.+++......+....+ -......-++.+++.+.+..+.+.++++++. +++.+... +....++++|++.
T Consensus 17 ~~a~e~i~~l~~~g~~~~~-~tN~~~~~~~~~~~~l~~~~g~~~~~~~iit----s~~~~~~~----l~~~~~~~~v~v~ 87 (236)
T TIGR01460 17 PGAAEALNRLRAKGKPVVF-LTNNSSRSEEDYAEKLSSLLGVDVSPDQIIT----SGSVTKDL----LRQRFEGEKVYVI 87 (236)
T ss_pred cCHHHHHHHHHHCCCeEEE-EECCCCCCHHHHHHHHHHhcCCCCCHHHeee----HHHHHHHH----HHHhCCCCEEEEE
Confidence 4566666554333221111 1111113445555554443456666777743 23333332 2222366777776
Q ss_pred CCCCcchhhhhhhCCCC
Q 015283 135 SPTWGNHKNIFNDARVP 151 (410)
Q Consensus 135 ~p~y~~~~~~~~~~g~~ 151 (410)
.+. .....++.+|.+
T Consensus 88 G~~--~~~~~l~~~g~~ 102 (236)
T TIGR01460 88 GVG--ELRESLEGLGFR 102 (236)
T ss_pred CCH--HHHHHHHHcCCc
Confidence 542 445566666654
No 498
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=21.99 E-value=2.8e+02 Score=25.65 Aligned_cols=74 Identities=15% Similarity=0.232 Sum_probs=44.0
Q ss_pred CCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 015283 137 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 216 (410)
Q Consensus 137 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 216 (410)
.|..+..++..-...++.|.+.+. .-.+...+.++. ...+++ - =|-+. +.+|.++|+++|+++|+.+
T Consensus 55 ~~~~~~~ll~~~~iD~V~Iatp~~----~H~e~~~~AL~a---GkhVl~-E---KPla~--t~~ea~~l~~~a~~~~~~l 121 (342)
T COG0673 55 AYTDLEELLADPDIDAVYIATPNA----LHAELALAALEA---GKHVLC-E---KPLAL--TLEEAEELVELARKAGVKL 121 (342)
T ss_pred ccCCHHHHhcCCCCCEEEEcCCCh----hhHHHHHHHHhc---CCEEEE-c---CCCCC--CHHHHHHHHHHHHHcCCce
Confidence 555666666654455555544211 234555566654 444444 2 34322 3888899999999998888
Q ss_pred cccccCC
Q 015283 217 FFDVAYQ 223 (410)
Q Consensus 217 i~Deay~ 223 (410)
.+.--+.
T Consensus 122 ~v~~~~R 128 (342)
T COG0673 122 MVGFNRR 128 (342)
T ss_pred eeehhhh
Confidence 7766633
No 499
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=21.85 E-value=7.3e+02 Score=23.96 Aligned_cols=74 Identities=15% Similarity=0.129 Sum_probs=39.3
Q ss_pred CCCEEEEcCCCCcchhh---------hhhhCCCCccc-eeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC
Q 015283 127 PGAKVLISSPTWGNHKN---------IFNDARVPWSE-YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 196 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~~~~---------~~~~~g~~~~~-v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~ 196 (410)
+||.|+...+..+++.. .+...|+++.. +.+ ... -+-+++...++..+|+..+-++ |-
T Consensus 318 ~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~-SgH---a~~~dl~~~i~~~~Pk~~ipvH-------ge- 385 (422)
T TIGR00649 318 KGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHV-SGH---ASQEDHKLLLRLLKPKYIIPVH-------GE- 385 (422)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEe-cCC---CCHHHHHHHHHHhCCCEEEecC-------Cc-
Confidence 67899998877776651 12245555432 222 112 2455666555543334333332 11
Q ss_pred CCHHHHHHHHHHHHHcCC
Q 015283 197 PTPEQWEKIADVIQEKNH 214 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~ 214 (410)
...+.+.++++++.|+
T Consensus 386 --~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 386 --YRMLINHTKLAEEEGY 401 (422)
T ss_pred --HHHHHHHHHHHHHcCC
Confidence 4457777777776653
No 500
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=21.67 E-value=1.3e+02 Score=28.36 Aligned_cols=39 Identities=13% Similarity=0.043 Sum_probs=25.6
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
..--++...++.|.|.+++.++++++.+.+.++|+.+-+
T Consensus 25 Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~v 63 (351)
T PF03786_consen 25 GVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSV 63 (351)
T ss_dssp TEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEE
T ss_pred CCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 334445566899999999999999999999999876544
Done!