Query 015283
Match_columns 410
No_of_seqs 148 out of 1671
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 09:53:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015283.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015283hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h51_A Aspartate aminotransfer 100.0 7.5E-62 2.6E-66 464.4 32.7 398 6-409 17-417 (420)
2 3k7y_A Aspartate aminotransfer 100.0 8.9E-60 3E-64 450.2 37.1 399 8-409 3-405 (405)
3 3meb_A Aspartate aminotransfer 100.0 2E-55 6.8E-60 427.9 38.1 404 5-409 20-444 (448)
4 4f4e_A Aromatic-amino-acid ami 100.0 2.7E-55 9.1E-60 423.9 37.2 399 5-407 20-420 (420)
5 7aat_A Aspartate aminotransfer 100.0 3.1E-55 1.1E-59 421.0 34.7 400 7-407 1-401 (401)
6 4eu1_A Mitochondrial aspartate 100.0 1.4E-53 4.7E-58 410.6 31.7 396 6-407 13-409 (409)
7 3fsl_A Aromatic-amino-acid ami 100.0 1.9E-52 6.3E-57 401.1 38.7 393 10-406 2-397 (397)
8 1yaa_A Aspartate aminotransfer 100.0 2.9E-50 1E-54 387.8 36.3 402 7-409 2-411 (412)
9 1ajs_A Aspartate aminotransfer 100.0 1.3E-49 4.6E-54 383.2 38.5 401 8-409 4-411 (412)
10 2q7w_A Aspartate aminotransfer 100.0 3.7E-49 1.3E-53 378.0 35.0 395 10-406 2-396 (396)
11 2ay1_A Aroat, aromatic amino a 100.0 5.8E-48 2E-52 369.5 34.5 391 10-405 2-392 (394)
12 3rq1_A Aminotransferase class 100.0 4.7E-47 1.6E-51 366.1 27.6 386 10-409 10-415 (418)
13 3t18_A Aminotransferase class 100.0 3.3E-46 1.1E-50 359.6 26.8 385 7-409 6-410 (413)
14 1b5p_A Protein (aspartate amin 100.0 7.1E-46 2.4E-50 353.9 25.0 364 10-408 5-384 (385)
15 3dyd_A Tyrosine aminotransfera 100.0 2.1E-45 7.2E-50 355.4 27.5 375 10-409 28-424 (427)
16 3tcm_A Alanine aminotransferas 100.0 6.9E-43 2.3E-47 343.7 32.3 339 54-408 108-493 (500)
17 3fvs_A Kynurenine--oxoglutarat 100.0 4.5E-44 1.5E-48 345.7 21.1 372 7-408 4-421 (422)
18 1gd9_A Aspartate aminotransfer 100.0 4.6E-43 1.6E-47 334.9 25.9 367 9-409 3-386 (389)
19 3b46_A Aminotransferase BNA3; 100.0 2.2E-43 7.6E-48 343.1 23.8 359 16-405 33-443 (447)
20 3h14_A Aminotransferase, class 100.0 4.4E-43 1.5E-47 335.3 25.4 356 12-408 7-381 (391)
21 1j32_A Aspartate aminotransfer 100.0 7.8E-43 2.7E-47 333.2 25.8 369 8-409 2-387 (388)
22 2x5d_A Probable aminotransfera 100.0 3.6E-43 1.2E-47 338.3 23.0 376 1-409 2-398 (412)
23 3e2y_A Kynurenine-oxoglutarate 100.0 2.2E-43 7.4E-48 339.5 21.1 366 10-405 2-409 (410)
24 3jtx_A Aminotransferase; NP_28 100.0 2.7E-42 9.3E-47 330.3 26.8 354 15-406 8-395 (396)
25 3ele_A Amino transferase; RER0 100.0 5.3E-43 1.8E-47 335.6 20.5 365 7-409 2-396 (398)
26 3ihj_A Alanine aminotransferas 100.0 1.3E-41 4.3E-46 334.2 30.7 339 55-408 104-492 (498)
27 2o1b_A Aminotransferase, class 100.0 1.7E-42 5.9E-47 332.6 23.7 363 12-409 25-403 (404)
28 3aow_A Putative uncharacterize 100.0 5.6E-42 1.9E-46 332.9 26.0 360 15-408 60-444 (448)
29 1o4s_A Aspartate aminotransfer 100.0 7.9E-42 2.7E-46 326.4 24.9 358 13-408 18-388 (389)
30 3nra_A Aspartate aminotransfer 100.0 2.4E-42 8.3E-47 331.8 21.3 365 14-409 14-405 (407)
31 1u08_A Hypothetical aminotrans 100.0 2.1E-41 7.3E-46 323.1 24.7 362 5-404 4-385 (386)
32 3piu_A 1-aminocyclopropane-1-c 100.0 9.7E-41 3.3E-45 323.6 29.4 356 26-409 29-432 (435)
33 2o0r_A RV0858C (N-succinyldiam 100.0 9.6E-42 3.3E-46 328.2 21.8 365 7-408 1-395 (411)
34 3qgu_A LL-diaminopimelate amin 100.0 2.4E-41 8.4E-46 329.1 24.4 340 33-408 68-439 (449)
35 2x5f_A Aspartate_tyrosine_phen 100.0 4.5E-41 1.5E-45 325.5 26.0 359 34-409 47-429 (430)
36 2dou_A Probable N-succinyldiam 100.0 3.5E-41 1.2E-45 320.5 23.7 350 19-406 8-375 (376)
37 1yiz_A Kynurenine aminotransfe 100.0 4.7E-41 1.6E-45 325.2 24.4 344 34-408 37-428 (429)
38 3ezs_A Aminotransferase ASPB; 100.0 8.4E-41 2.9E-45 317.8 25.8 350 16-409 4-375 (376)
39 2r2n_A Kynurenine/alpha-aminoa 100.0 8.5E-41 2.9E-45 322.9 25.7 371 10-409 8-424 (425)
40 1bw0_A TAT, protein (tyrosine 100.0 1.2E-40 4.1E-45 321.1 26.6 369 19-409 17-413 (416)
41 3g0t_A Putative aminotransfera 100.0 2.6E-41 8.8E-46 327.8 21.1 353 31-408 41-436 (437)
42 1xi9_A Putative transaminase; 100.0 1.6E-40 5.6E-45 319.1 26.3 360 16-409 22-403 (406)
43 3fdb_A Beta C-S lyase, putativ 100.0 3.9E-41 1.3E-45 320.1 21.2 339 33-409 22-376 (377)
44 1iay_A ACC synthase 2, 1-amino 100.0 7.9E-40 2.7E-44 316.5 30.3 347 35-409 37-427 (428)
45 3kax_A Aminotransferase, class 100.0 3E-40 1E-44 314.7 26.0 341 33-406 23-382 (383)
46 2z61_A Probable aspartate amin 100.0 3.6E-40 1.2E-44 312.8 25.8 348 13-407 6-369 (370)
47 2gb3_A Aspartate aminotransfer 100.0 5.3E-40 1.8E-44 315.8 27.0 358 11-408 18-401 (409)
48 3dzz_A Putative pyridoxal 5'-p 100.0 6E-40 2.1E-44 313.4 26.9 344 34-409 27-389 (391)
49 2zc0_A Alanine glyoxylate tran 100.0 3.3E-39 1.1E-43 310.1 29.7 369 10-409 8-404 (407)
50 4dq6_A Putative pyridoxal phos 100.0 1E-39 3.6E-44 311.7 25.9 341 33-407 31-391 (391)
51 1v2d_A Glutamine aminotransfer 100.0 4.9E-40 1.7E-44 313.1 23.3 357 7-409 1-371 (381)
52 3ei9_A LL-diaminopimelate amin 100.0 5.9E-40 2E-44 317.8 23.6 334 34-408 56-427 (432)
53 1vp4_A Aminotransferase, putat 100.0 2.9E-40 9.9E-45 319.2 21.2 349 33-408 42-417 (425)
54 1c7n_A Cystalysin; transferase 100.0 2.5E-39 8.4E-44 310.2 25.8 344 34-409 31-393 (399)
55 3ppl_A Aspartate aminotransfer 100.0 1.3E-39 4.3E-44 315.0 23.1 346 33-408 32-419 (427)
56 3asa_A LL-diaminopimelate amin 100.0 8.7E-40 3E-44 313.4 20.5 359 8-409 2-393 (400)
57 3l8a_A METC, putative aminotra 100.0 3.8E-39 1.3E-43 311.0 24.2 343 33-407 60-420 (421)
58 2zyj_A Alpha-aminodipate amino 100.0 1.8E-38 6.1E-43 304.0 26.6 361 10-409 11-393 (397)
59 3get_A Histidinol-phosphate am 100.0 3.3E-38 1.1E-42 298.7 27.7 323 34-407 30-365 (365)
60 3ly1_A Putative histidinol-pho 100.0 4.4E-38 1.5E-42 296.5 28.3 325 33-408 15-351 (354)
61 3d6k_A Putative aminotransfera 100.0 1.2E-38 4.1E-43 307.6 23.9 343 35-408 33-417 (422)
62 3f6t_A Aspartate aminotransfer 100.0 1.2E-39 4.3E-44 322.4 17.3 342 35-409 104-525 (533)
63 1d2f_A MALY protein; aminotran 100.0 3.3E-38 1.1E-42 301.4 26.6 343 34-409 28-389 (390)
64 3ez1_A Aminotransferase MOCR f 100.0 2.6E-38 8.9E-43 305.4 25.1 347 34-408 25-414 (423)
65 3g7q_A Valine-pyruvate aminotr 100.0 1.1E-38 3.9E-43 307.3 22.0 361 17-409 13-413 (417)
66 3ffh_A Histidinol-phosphate am 100.0 1.3E-37 4.3E-42 294.5 27.8 320 34-406 32-363 (363)
67 3op7_A Aminotransferase class 100.0 3.7E-38 1.3E-42 299.5 23.7 309 63-409 50-371 (375)
68 3euc_A Histidinol-phosphate am 100.0 2E-37 6.8E-42 293.5 27.5 327 31-407 27-366 (367)
69 3if2_A Aminotransferase; YP_26 100.0 9.3E-38 3.2E-42 303.4 22.0 367 16-409 12-440 (444)
70 2zy4_A L-aspartate beta-decarb 100.0 1.8E-38 6E-43 314.2 16.2 338 36-408 106-521 (546)
71 1fg7_A Histidinol phosphate am 100.0 4.3E-37 1.5E-41 290.0 22.6 313 35-405 30-354 (356)
72 3b1d_A Betac-S lyase; HET: PLP 100.0 4.8E-40 1.7E-44 314.4 0.0 341 34-407 31-391 (392)
73 1lc5_A COBD, L-threonine-O-3-p 100.0 4.9E-36 1.7E-40 283.7 25.7 341 16-409 7-360 (364)
74 3p1t_A Putative histidinol-pho 100.0 3.1E-36 1.1E-40 281.9 23.9 313 34-408 16-336 (337)
75 3cq5_A Histidinol-phosphate am 100.0 7.4E-36 2.5E-40 283.0 25.7 325 36-408 32-367 (369)
76 3ftb_A Histidinol-phosphate am 100.0 1.8E-35 6.2E-40 279.3 26.7 335 15-408 11-360 (361)
77 3hdo_A Histidinol-phosphate am 100.0 5.8E-35 2E-39 275.9 26.4 316 34-408 26-354 (360)
78 3bwn_A AT1G70560, L-tryptophan 100.0 5.8E-37 2E-41 292.6 10.1 323 33-408 21-386 (391)
79 1uu1_A Histidinol-phosphate am 100.0 5.7E-35 1.9E-39 273.2 21.6 309 34-405 19-334 (335)
80 2hox_A ALLIIN lyase 1; cystein 100.0 3.2E-35 1.1E-39 283.4 12.6 327 34-408 56-424 (427)
81 3fkd_A L-threonine-O-3-phospha 100.0 1.2E-33 4.2E-38 265.8 20.7 311 34-408 15-341 (350)
82 3a2b_A Serine palmitoyltransfe 100.0 8.4E-32 2.9E-36 257.7 25.2 329 33-409 42-392 (398)
83 1t3i_A Probable cysteine desul 100.0 4E-30 1.4E-34 247.6 26.1 326 35-409 28-413 (420)
84 1eg5_A Aminotransferase; PLP-d 100.0 2E-30 6.9E-35 246.6 21.0 322 44-409 4-376 (384)
85 3tqx_A 2-amino-3-ketobutyrate 100.0 6.2E-30 2.1E-34 244.7 23.5 328 33-409 42-396 (399)
86 2dr1_A PH1308 protein, 386AA l 100.0 4.1E-30 1.4E-34 244.7 22.1 323 44-409 22-379 (386)
87 1kmj_A Selenocysteine lyase; p 100.0 5E-30 1.7E-34 245.7 22.2 330 35-409 23-405 (406)
88 1bs0_A Protein (8-amino-7-oxon 100.0 3.4E-29 1.2E-33 238.4 25.3 322 33-405 38-383 (384)
89 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 4.5E-30 1.5E-34 243.2 18.0 323 33-410 6-371 (371)
90 1vjo_A Alanine--glyoxylate ami 100.0 6.6E-30 2.3E-34 244.1 17.7 318 47-407 39-393 (393)
91 1e5e_A MGL, methionine gamma-l 100.0 2.4E-28 8.1E-33 233.9 27.1 313 37-408 21-394 (404)
92 1svv_A Threonine aldolase; str 100.0 5.5E-29 1.9E-33 234.5 22.4 331 33-409 12-358 (359)
93 1sff_A 4-aminobutyrate aminotr 100.0 1.1E-29 3.7E-34 245.2 17.5 338 34-409 41-424 (426)
94 1jg8_A L-ALLO-threonine aldola 100.0 5E-29 1.7E-33 233.9 18.5 322 35-409 4-346 (347)
95 2eh6_A Acoat, acetylornithine 100.0 7.7E-29 2.6E-33 235.1 19.7 324 34-406 28-375 (375)
96 2w8t_A SPT, serine palmitoyltr 100.0 1.5E-28 5E-33 237.4 21.9 326 34-409 64-415 (427)
97 2bwn_A 5-aminolevulinate synth 100.0 7.2E-28 2.4E-32 230.6 26.3 329 35-409 47-400 (401)
98 3f9t_A TDC, L-tyrosine decarbo 100.0 3.6E-29 1.2E-33 238.8 16.8 323 53-407 42-396 (397)
99 3zrp_A Serine-pyruvate aminotr 100.0 1.8E-28 6.3E-33 233.0 21.7 318 49-409 9-363 (384)
100 2z9v_A Aspartate aminotransfer 100.0 1.4E-28 4.8E-33 234.7 20.8 322 44-409 11-371 (392)
101 1iug_A Putative aspartate amin 100.0 8E-29 2.7E-33 232.8 18.4 311 49-409 8-348 (352)
102 3i4j_A Aminotransferase, class 100.0 3.8E-28 1.3E-32 234.7 22.4 346 34-409 29-428 (430)
103 4adb_A Succinylornithine trans 100.0 1.3E-28 4.4E-33 236.2 18.6 332 34-409 39-400 (406)
104 1elu_A L-cysteine/L-cystine C- 100.0 4.6E-29 1.6E-33 237.8 15.2 325 35-405 16-388 (390)
105 3ruy_A Ornithine aminotransfer 100.0 6.7E-28 2.3E-32 230.1 23.2 333 34-407 36-392 (392)
106 3kki_A CAI-1 autoinducer synth 100.0 6E-28 2E-32 231.8 22.8 321 34-408 59-403 (409)
107 1v72_A Aldolase; PLP-dependent 100.0 2.5E-28 8.4E-33 229.8 19.5 326 33-408 6-352 (356)
108 1fc4_A 2-amino-3-ketobutyrate 100.0 3E-28 1E-32 233.2 19.7 325 33-409 44-397 (401)
109 2ord_A Acoat, acetylornithine 100.0 1.5E-28 5.2E-33 235.0 17.5 325 34-409 40-397 (397)
110 2huf_A Alanine glyoxylate amin 100.0 4.6E-28 1.6E-32 231.2 20.8 333 26-409 10-383 (393)
111 2ch1_A 3-hydroxykynurenine tra 100.0 1.6E-28 5.5E-33 234.6 17.6 313 52-409 28-383 (396)
112 3lvm_A Cysteine desulfurase; s 100.0 6.1E-28 2.1E-32 232.7 21.6 327 34-409 21-399 (423)
113 4eb5_A Probable cysteine desul 100.0 1.9E-28 6.7E-33 232.8 17.1 320 44-408 3-372 (382)
114 2ez2_A Beta-tyrosinase, tyrosi 100.0 7.8E-27 2.7E-31 227.2 28.5 357 12-408 9-430 (456)
115 3l44_A Glutamate-1-semialdehyd 100.0 1.4E-27 4.7E-32 231.1 22.6 334 34-409 55-430 (434)
116 2eo5_A 419AA long hypothetical 100.0 2.1E-27 7.2E-32 228.7 22.7 329 34-409 42-418 (419)
117 1vef_A Acetylornithine/acetyl- 100.0 1.1E-27 3.6E-32 229.0 19.9 334 34-407 45-395 (395)
118 3dxv_A Alpha-amino-epsilon-cap 100.0 1.8E-27 6E-32 230.7 21.0 340 34-409 43-425 (439)
119 3fq8_A Glutamate-1-semialdehyd 100.0 1.5E-27 5.1E-32 230.4 20.3 334 34-408 52-426 (427)
120 3k28_A Glutamate-1-semialdehyd 100.0 4.3E-27 1.5E-31 227.2 23.4 335 34-409 53-427 (429)
121 1m32_A 2-aminoethylphosphonate 100.0 1.1E-27 3.6E-32 226.2 18.4 323 36-409 5-365 (366)
122 3kgw_A Alanine-glyoxylate amin 100.0 1.3E-27 4.3E-32 228.0 18.8 316 51-409 32-388 (393)
123 4hvk_A Probable cysteine desul 100.0 5.4E-28 1.8E-32 229.5 15.8 321 45-409 4-373 (382)
124 3nx3_A Acoat, acetylornithine 100.0 1.8E-27 6E-32 227.5 19.0 327 34-408 36-394 (395)
125 3nnk_A Ureidoglycine-glyoxylat 100.0 1.6E-27 5.5E-32 228.8 18.8 313 51-409 22-390 (411)
126 1s0a_A Adenosylmethionine-8-am 100.0 1.1E-26 3.8E-31 224.4 23.6 343 34-409 43-424 (429)
127 3cai_A Possible aminotransfera 99.9 6.2E-27 2.1E-31 224.4 20.8 324 35-405 26-405 (406)
128 2yrr_A Aminotransferase, class 99.9 3.6E-27 1.2E-31 221.5 18.6 311 51-408 9-352 (353)
129 3isl_A Purine catabolism prote 99.9 6.1E-27 2.1E-31 225.1 20.5 312 52-409 21-390 (416)
130 3gju_A Putative aminotransfera 99.9 1.6E-26 5.6E-31 225.1 23.8 348 34-409 51-456 (460)
131 2pb2_A Acetylornithine/succiny 99.9 1E-26 3.4E-31 223.9 21.5 326 34-409 57-418 (420)
132 1ax4_A Tryptophanase; tryptoph 99.9 1.1E-26 3.8E-31 226.9 21.7 358 15-408 13-440 (467)
133 3n5m_A Adenosylmethionine-8-am 99.9 4.1E-27 1.4E-31 228.9 17.5 339 34-408 49-451 (452)
134 3f0h_A Aminotransferase; RER07 99.9 2.8E-26 9.5E-31 217.5 22.7 312 52-408 29-373 (376)
135 4ffc_A 4-aminobutyrate aminotr 99.9 5.3E-27 1.8E-31 227.9 17.3 341 34-409 64-449 (453)
136 4a6r_A Omega transaminase; tra 99.9 2.2E-26 7.6E-31 224.1 21.7 347 34-409 50-449 (459)
137 2bkw_A Alanine-glyoxylate amin 99.9 2.1E-26 7.3E-31 218.9 21.0 316 51-409 14-384 (385)
138 1zod_A DGD, 2,2-dialkylglycine 99.9 1.1E-26 3.6E-31 224.8 18.6 340 34-409 43-432 (433)
139 2rfv_A Methionine gamma-lyase; 99.9 8.6E-26 2.9E-30 216.0 24.5 228 38-309 24-260 (398)
140 2aeu_A Hypothetical protein MJ 99.9 2.4E-26 8.3E-31 217.7 20.2 315 35-409 29-371 (374)
141 3vax_A Putative uncharacterize 99.9 1.1E-27 3.7E-32 229.2 10.6 318 49-408 28-399 (400)
142 2dkj_A Serine hydroxymethyltra 99.9 6.4E-26 2.2E-30 217.4 21.9 325 34-408 23-387 (407)
143 2oat_A Ornithine aminotransfer 99.9 2.3E-25 7.7E-30 215.5 25.8 326 34-408 76-438 (439)
144 3dod_A Adenosylmethionine-8-am 99.9 2.1E-26 7E-31 223.7 18.4 342 34-409 44-443 (448)
145 2epj_A Glutamate-1-semialdehyd 99.9 5.7E-26 1.9E-30 219.7 21.3 330 34-409 56-431 (434)
146 2oga_A Transaminase; PLP-depen 99.9 9.6E-26 3.3E-30 215.7 22.6 316 35-409 31-396 (399)
147 3i5t_A Aminotransferase; pyrid 99.9 1.3E-25 4.5E-30 219.1 24.0 346 34-408 54-453 (476)
148 1b9h_A AHBA synthase, protein 99.9 1.4E-25 4.9E-30 213.7 23.6 307 51-408 13-387 (388)
149 3tfu_A Adenosylmethionine-8-am 99.9 7.4E-26 2.5E-30 219.8 21.9 343 35-409 76-453 (457)
150 4e77_A Glutamate-1-semialdehyd 99.9 7.8E-26 2.7E-30 218.4 21.6 336 34-408 53-428 (429)
151 1z7d_A Ornithine aminotransfer 99.9 1.2E-25 4E-30 217.2 21.4 327 34-409 65-429 (433)
152 2cy8_A D-phgat, D-phenylglycin 99.9 6.2E-26 2.1E-30 220.7 18.3 330 34-408 57-434 (453)
153 2po3_A 4-dehydrase; external a 99.9 7.4E-25 2.5E-29 211.3 25.6 317 38-408 20-385 (424)
154 1qz9_A Kynureninase; kynurenin 99.9 6.8E-26 2.3E-30 217.9 18.2 320 35-408 28-401 (416)
155 2e7u_A Glutamate-1-semialdehyd 99.9 3.2E-25 1.1E-29 213.8 22.4 326 34-406 52-424 (424)
156 3a8u_X Omega-amino acid--pyruv 99.9 5.1E-25 1.8E-29 214.0 23.7 343 34-409 50-447 (449)
157 3oks_A 4-aminobutyrate transam 99.9 9.1E-26 3.1E-30 219.2 18.3 339 34-408 61-450 (451)
158 3ffr_A Phosphoserine aminotran 99.9 4.1E-25 1.4E-29 208.2 20.6 308 51-406 13-361 (362)
159 3mc6_A Sphingosine-1-phosphate 99.9 4.4E-25 1.5E-29 217.2 21.4 322 55-409 78-437 (497)
160 3hmu_A Aminotransferase, class 99.9 3.1E-25 1.1E-29 216.2 20.0 340 34-408 55-451 (472)
161 3mad_A Sphingosine-1-phosphate 99.9 6.9E-25 2.4E-29 216.6 22.6 319 54-408 113-468 (514)
162 3uwc_A Nucleotide-sugar aminot 99.9 5.5E-25 1.9E-29 208.5 19.0 317 34-409 6-371 (374)
163 2oqx_A Tryptophanase; lyase, p 99.9 7.8E-25 2.7E-29 213.7 20.4 360 11-408 7-441 (467)
164 3lws_A Aromatic amino acid bet 99.9 2.3E-25 7.8E-30 209.8 15.9 290 71-406 41-356 (357)
165 2c81_A Glutamine-2-deoxy-scyll 99.9 1.8E-24 6.2E-29 208.1 21.9 198 49-282 10-215 (418)
166 2cjg_A L-lysine-epsilon aminot 99.9 5.9E-25 2E-29 213.3 18.6 340 34-409 54-448 (449)
167 1mdo_A ARNB aminotransferase; 99.9 2.7E-24 9.4E-29 205.1 22.8 304 53-409 18-386 (393)
168 1ibj_A CBL, cystathionine beta 99.9 1.1E-24 3.6E-29 211.4 19.7 199 71-310 125-328 (464)
169 3n0l_A Serine hydroxymethyltra 99.9 2.6E-24 8.8E-29 206.8 22.1 327 35-408 26-388 (417)
170 3a9z_A Selenocysteine lyase; P 99.9 2.1E-24 7.2E-29 208.6 21.6 329 35-409 18-428 (432)
171 3dr4_A Putative perosamine syn 99.9 1.3E-24 4.4E-29 207.3 19.4 313 34-406 22-390 (391)
172 1wyu_B Glycine dehydrogenase s 99.9 1.4E-24 4.7E-29 212.1 19.0 316 54-407 79-439 (474)
173 1rv3_A Serine hydroxymethyltra 99.9 2.3E-24 8E-29 210.7 20.0 330 34-408 44-430 (483)
174 2fnu_A Aminotransferase; prote 99.9 6.4E-24 2.2E-28 201.1 21.9 305 51-409 9-372 (375)
175 3pj0_A LMO0305 protein; struct 99.9 3.2E-25 1.1E-29 209.0 12.7 306 53-406 27-359 (359)
176 2c0r_A PSAT, phosphoserine ami 99.9 1.2E-24 4E-29 205.3 15.5 311 49-409 11-361 (362)
177 1w23_A Phosphoserine aminotran 99.9 3.7E-25 1.3E-29 208.5 11.7 308 51-408 12-359 (360)
178 3nyt_A Aminotransferase WBPE; 99.9 2.6E-24 8.8E-29 203.5 17.4 304 52-405 13-360 (367)
179 3e9k_A Kynureninase; kynurenin 99.9 8.5E-24 2.9E-28 206.3 21.5 297 79-408 113-460 (465)
180 3h7f_A Serine hydroxymethyltra 99.9 6E-24 2.1E-28 206.1 18.9 326 35-408 46-413 (447)
181 1o69_A Aminotransferase; struc 99.9 1.6E-23 5.5E-28 199.9 21.5 307 50-408 7-386 (394)
182 3frk_A QDTB; aminotransferase, 99.9 4.2E-24 1.4E-28 202.4 17.1 305 52-408 14-367 (373)
183 3acz_A Methionine gamma-lyase; 99.9 9E-23 3.1E-27 194.3 24.9 276 75-408 57-388 (389)
184 1cs1_A CGS, protein (cystathio 99.9 1.2E-22 4.1E-27 193.3 25.5 215 75-342 50-269 (386)
185 3ecd_A Serine hydroxymethyltra 99.9 1.8E-23 6.1E-28 201.5 19.9 323 35-408 33-396 (425)
186 2dgk_A GAD-beta, GADB, glutama 99.9 5.2E-24 1.8E-28 207.0 15.7 322 53-408 54-433 (452)
187 3gbx_A Serine hydroxymethyltra 99.9 5.1E-24 1.7E-28 205.0 15.3 315 53-408 42-395 (420)
188 1gc0_A Methionine gamma-lyase; 99.9 7.7E-23 2.6E-27 195.4 22.9 248 39-339 26-281 (398)
189 3cog_A Cystathionine gamma-lya 99.9 6E-23 2E-27 196.2 21.7 195 71-309 62-262 (403)
190 1pff_A Methionine gamma-lyase; 99.9 2.1E-23 7.2E-28 194.3 17.9 183 81-306 2-192 (331)
191 2vi8_A Serine hydroxymethyltra 99.9 6.1E-23 2.1E-27 196.4 20.9 310 54-409 36-387 (405)
192 3qhx_A Cystathionine gamma-syn 99.9 3E-22 1E-26 190.8 25.1 215 75-342 64-283 (392)
193 2z67_A O-phosphoseryl-tRNA(SEC 99.9 3.2E-23 1.1E-27 201.5 16.9 292 79-406 131-455 (456)
194 3ndn_A O-succinylhomoserine su 99.9 1.8E-22 6.3E-27 193.1 21.7 214 76-343 80-299 (414)
195 2cb1_A O-acetyl homoserine sul 99.9 3.2E-21 1.1E-25 185.0 29.1 176 54-269 35-216 (412)
196 3ju7_A Putative PLP-dependent 99.9 3E-22 1E-26 189.6 20.9 310 54-408 15-374 (377)
197 2yky_A Beta-transaminase; tran 99.8 2.9E-25 9.8E-30 214.2 0.0 332 34-409 100-460 (465)
198 1qgn_A Protein (cystathionine 99.9 9.1E-21 3.1E-25 182.4 31.1 215 75-343 112-332 (445)
199 2qma_A Diaminobutyrate-pyruvat 99.9 1E-22 3.5E-27 200.2 17.6 352 27-409 86-496 (497)
200 3hbx_A GAD 1, glutamate decarb 99.9 1.6E-22 5.4E-27 198.6 18.2 327 51-408 66-443 (502)
201 3ke3_A Putative serine-pyruvat 99.9 3.5E-23 1.2E-27 196.5 12.9 291 80-409 38-376 (379)
202 2a7v_A Serine hydroxymethyltra 99.9 1E-21 3.5E-26 190.5 22.2 324 35-407 55-439 (490)
203 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 4.3E-21 1.5E-25 185.6 24.2 191 53-279 41-239 (437)
204 1n8p_A Cystathionine gamma-lya 99.9 3.5E-21 1.2E-25 183.3 22.7 213 75-342 53-274 (393)
205 3jzl_A Putative cystathionine 99.9 6.8E-21 2.3E-25 181.3 24.4 247 55-344 32-303 (409)
206 1js3_A DDC;, DOPA decarboxylas 99.9 4.2E-22 1.4E-26 195.3 16.4 327 54-408 87-473 (486)
207 3ri6_A O-acetylhomoserine sulf 99.9 1.2E-20 4E-25 181.1 25.2 159 75-269 80-242 (430)
208 3i16_A Aluminum resistance pro 99.9 1.1E-20 3.7E-25 180.5 24.5 248 55-344 46-320 (427)
209 3ht4_A Aluminum resistance pro 99.9 5.3E-21 1.8E-25 183.5 21.8 253 54-344 37-309 (431)
210 2okj_A Glutamate decarboxylase 99.9 2.2E-21 7.6E-26 191.0 19.5 323 59-409 111-502 (504)
211 3hvy_A Cystathionine beta-lyas 99.9 1.5E-20 5.2E-25 179.5 23.7 250 54-344 46-320 (427)
212 3vp6_A Glutamate decarboxylase 99.9 5.6E-21 1.9E-25 187.9 20.9 326 55-408 110-504 (511)
213 2fyf_A PSAT, phosphoserine ami 99.9 1.9E-21 6.6E-26 185.7 16.4 316 34-408 39-397 (398)
214 3nmy_A Xometc, cystathionine g 99.9 1.3E-20 4.4E-25 179.5 21.9 216 75-343 65-286 (400)
215 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.4E-21 4.9E-26 189.0 15.4 282 72-408 52-352 (446)
216 1ohv_A 4-aminobutyrate aminotr 99.9 4.5E-21 1.6E-25 186.9 16.9 338 34-409 63-471 (472)
217 2ctz_A O-acetyl-L-homoserine s 99.9 6.1E-20 2.1E-24 176.4 23.6 158 77-269 58-220 (421)
218 2fq6_A Cystathionine beta-lyas 99.8 2.3E-19 8E-24 171.5 25.1 170 75-283 80-256 (415)
219 4e1o_A HDC, histidine decarbox 99.8 1.1E-20 3.7E-25 184.7 16.1 328 54-409 92-478 (481)
220 2jis_A Cysteine sulfinic acid 99.8 1.3E-19 4.4E-24 178.7 22.5 325 54-408 121-514 (515)
221 3b8x_A WBDK, pyridoxamine 5-ph 99.8 2.6E-19 8.9E-24 170.5 23.6 152 51-225 11-167 (390)
222 3k40_A Aromatic-L-amino-acid d 99.8 2.5E-20 8.7E-25 181.7 16.7 327 54-409 87-471 (475)
223 4ao9_A Beta-phenylalanine amin 99.8 1.1E-19 3.9E-24 174.0 19.0 331 34-409 87-446 (454)
224 1wyu_A Glycine dehydrogenase ( 99.8 2.4E-19 8.2E-24 173.3 19.3 277 80-406 111-437 (438)
225 1c4k_A Protein (ornithine deca 99.8 3.7E-19 1.3E-23 180.1 19.4 176 75-268 171-366 (730)
226 2vyc_A Biodegradative arginine 99.8 2E-18 7E-23 176.2 19.4 174 76-268 204-397 (755)
227 3qm2_A Phosphoserine aminotran 99.8 1.5E-18 5.1E-23 163.6 12.6 320 43-408 28-384 (386)
228 3e77_A Phosphoserine aminotran 99.8 4E-18 1.4E-22 159.8 12.7 310 49-408 20-374 (377)
229 3m5u_A Phosphoserine aminotran 99.7 6E-17 2.1E-21 151.3 16.7 309 49-409 12-360 (361)
230 4atq_A 4-aminobutyrate transam 99.7 3E-16 1E-20 150.9 20.7 339 34-409 64-455 (456)
231 3n75_A LDC, lysine decarboxyla 99.7 5.2E-17 1.8E-21 163.1 13.8 172 73-267 191-378 (715)
232 4e3q_A Pyruvate transaminase; 99.7 3E-15 1E-19 144.5 22.9 340 35-409 68-468 (473)
233 3ou5_A Serine hydroxymethyltra 99.7 3.6E-15 1.2E-19 138.9 21.5 333 35-407 55-439 (490)
234 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 9.6E-14 3.3E-18 129.9 21.4 234 81-342 116-355 (501)
235 4a0g_A Adenosylmethionine-8-am 99.6 4.4E-15 1.5E-19 152.7 11.5 345 35-409 381-828 (831)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 1.7E-13 6E-18 129.9 12.0 188 79-280 96-288 (450)
237 3gh5_A HEX1, beta-hexosaminida 71.7 17 0.00057 35.0 9.1 68 144-218 207-274 (525)
238 1jak_A Beta-N-acetylhexosamini 67.7 17 0.00059 34.8 8.4 65 147-218 185-249 (512)
239 1now_A Beta-hexosaminidase bet 59.0 16 0.00055 35.0 6.4 25 194-218 214-238 (507)
240 4fgs_A Probable dehydrogenase 52.7 42 0.0014 29.1 7.5 101 100-208 28-133 (273)
241 2ya0_A Putative alkaline amylo 47.0 9.2 0.00031 38.6 2.6 28 199-226 254-281 (714)
242 2gjx_A Beta-hexosaminidase alp 46.6 16 0.00054 35.1 4.1 27 192-218 207-233 (507)
243 1ofu_X SULA, hypothetical prot 46.3 87 0.003 23.2 11.0 100 108-215 10-112 (119)
244 2e8y_A AMYX protein, pullulana 45.1 7 0.00024 39.4 1.4 29 199-227 315-343 (718)
245 3guy_A Short-chain dehydrogena 44.9 94 0.0032 25.5 8.5 93 108-207 6-101 (230)
246 1c7s_A Beta-N-acetylhexosamini 42.5 37 0.0013 34.8 6.1 74 144-218 336-418 (858)
247 3zq4_A Ribonuclease J 1, RNAse 41.8 72 0.0025 30.9 8.0 75 126-214 322-408 (555)
248 2ya1_A Putative alkaline amylo 41.0 13 0.00045 39.1 2.7 28 199-226 561-588 (1014)
249 2yl5_A Beta-N-acetylhexosamini 40.0 17 0.00059 34.1 3.2 28 191-218 86-113 (442)
250 4gqr_A Pancreatic alpha-amylas 39.8 17 0.00058 34.4 3.2 29 198-226 75-103 (496)
251 1bqc_A Protein (beta-mannanase 39.1 39 0.0013 29.5 5.2 22 199-220 64-85 (302)
252 1ea9_C Cyclomaltodextrinase; h 37.1 27 0.00091 34.2 4.1 33 195-227 214-246 (583)
253 2yl6_A Beta-N-acetylhexosamini 36.6 18 0.0006 34.0 2.6 28 191-218 83-110 (434)
254 1wzl_A Alpha-amylase II; pullu 36.2 20 0.0007 35.0 3.1 33 195-227 215-247 (585)
255 3ozo_A N-acetylglucosaminidase 35.6 34 0.0012 33.2 4.5 24 194-217 250-273 (572)
256 1j0h_A Neopullulanase; beta-al 34.8 24 0.00081 34.6 3.3 31 197-227 220-250 (588)
257 3faw_A Reticulocyte binding pr 34.8 20 0.00069 36.9 2.9 28 199-226 369-396 (877)
258 3rwb_A TPLDH, pyridoxal 4-dehy 34.5 89 0.003 26.2 6.7 93 108-208 11-110 (247)
259 1ht6_A AMY1, alpha-amylase iso 34.1 32 0.0011 31.7 4.0 30 198-227 67-96 (405)
260 4g81_D Putative hexonate dehyd 33.9 2.2E+02 0.0074 24.2 9.1 100 101-208 9-116 (255)
261 1vhx_A Putative holliday junct 33.5 91 0.0031 24.1 5.9 59 164-224 41-102 (150)
262 1lwj_A 4-alpha-glucanotransfer 33.2 25 0.00087 32.8 3.2 29 199-227 69-97 (441)
263 1g94_A Alpha-amylase; beta-alp 32.5 21 0.00072 33.5 2.5 29 199-227 64-92 (448)
264 1xp8_A RECA protein, recombina 32.5 2.6E+02 0.0088 25.2 9.7 132 76-218 56-206 (366)
265 3rd5_A Mypaa.01249.C; ssgcid, 31.8 1E+02 0.0035 26.5 6.8 70 108-185 21-91 (291)
266 4aie_A Glucan 1,6-alpha-glucos 31.8 27 0.00092 33.6 3.2 29 198-226 78-106 (549)
267 3ecs_A Translation initiation 31.7 2.6E+02 0.0089 24.6 9.2 103 100-219 121-229 (315)
268 3bk2_A RNAse J, metal dependen 31.6 1.8E+02 0.006 28.1 8.9 79 126-214 337-423 (562)
269 2guy_A Alpha-amylase A; (beta- 31.3 27 0.00093 33.0 3.0 28 199-226 97-124 (478)
270 3tpc_A Short chain alcohol deh 31.2 1.3E+02 0.0043 25.3 7.2 48 108-157 12-60 (257)
271 2dh2_A 4F2 cell-surface antige 31.2 33 0.0011 31.9 3.5 28 199-226 81-108 (424)
272 2z1k_A (NEO)pullulanase; hydro 30.9 28 0.00095 32.9 3.0 29 199-227 96-124 (475)
273 1mxg_A Alpha amylase; hyperthe 30.4 37 0.0013 31.7 3.7 28 199-226 86-113 (435)
274 1wza_A Alpha-amylase A; hydrol 30.4 31 0.0011 32.7 3.3 29 199-227 81-109 (488)
275 1hjs_A Beta-1,4-galactanase; 4 30.0 44 0.0015 29.9 4.0 38 189-226 49-86 (332)
276 2aaa_A Alpha-amylase; glycosid 29.8 31 0.001 32.7 3.1 29 199-227 97-125 (484)
277 1jae_A Alpha-amylase; glycosid 29.5 26 0.00088 33.2 2.5 29 199-227 74-102 (471)
278 3m07_A Putative alpha amylase; 28.9 37 0.0013 33.4 3.6 31 197-227 200-230 (618)
279 1gcy_A Glucan 1,4-alpha-maltot 28.7 41 0.0014 32.3 3.8 30 199-228 92-121 (527)
280 1ua7_A Alpha-amylase; beta-alp 28.1 27 0.00091 32.5 2.3 30 198-227 73-102 (422)
281 1ud2_A Amylase, alpha-amylase; 28.0 26 0.00089 33.2 2.3 28 199-226 80-107 (480)
282 2l8b_A Protein TRAI, DNA helic 27.7 2.4E+02 0.0083 22.7 10.0 143 56-221 11-158 (189)
283 1hvx_A Alpha-amylase; hydrolas 27.5 28 0.00096 33.4 2.4 28 199-226 81-108 (515)
284 2wc7_A Alpha amylase, catalyti 27.2 28 0.00095 33.1 2.3 29 199-227 102-130 (488)
285 3gem_A Short chain dehydrogena 27.0 2.3E+02 0.0079 23.8 8.1 40 108-149 32-72 (260)
286 3ppi_A 3-hydroxyacyl-COA dehyd 26.8 2.5E+02 0.0084 23.8 8.3 48 108-157 35-83 (281)
287 3tqq_A Methionyl-tRNA formyltr 26.8 2E+02 0.0068 25.4 7.7 91 165-269 13-108 (314)
288 1fob_A Beta-1,4-galactanase; B 26.6 56 0.0019 29.2 4.1 37 190-226 50-86 (334)
289 1m7x_A 1,4-alpha-glucan branch 26.2 31 0.0011 33.9 2.5 31 197-227 202-232 (617)
290 3gvc_A Oxidoreductase, probabl 26.1 1.5E+02 0.0052 25.3 6.8 98 102-208 30-133 (277)
291 1i4n_A Indole-3-glycerol phosp 25.8 1E+02 0.0036 26.2 5.4 85 126-221 74-158 (251)
292 3s5o_A 4-hydroxy-2-oxoglutarat 25.8 3.3E+02 0.011 23.7 10.5 13 127-139 109-121 (307)
293 2bhu_A Maltooligosyltrehalose 25.7 34 0.0012 33.6 2.7 31 197-227 190-220 (602)
294 1wpc_A Glucan 1,4-alpha-maltoh 25.7 32 0.0011 32.6 2.4 28 199-226 82-109 (485)
295 3bzy_B ESCU; auto cleavage pro 25.5 34 0.0012 23.6 1.9 23 199-221 26-48 (83)
296 4aef_A Neopullulanase (alpha-a 25.5 38 0.0013 33.5 3.0 31 196-226 282-312 (645)
297 1zja_A Trehalulose synthase; s 25.4 41 0.0014 32.6 3.2 29 199-227 79-107 (557)
298 3k1d_A 1,4-alpha-glucan-branch 25.4 35 0.0012 34.3 2.6 32 196-227 309-340 (722)
299 4dqx_A Probable oxidoreductase 25.1 1.5E+02 0.0052 25.3 6.6 96 102-207 28-130 (277)
300 3bh4_A Alpha-amylase; calcium, 25.0 42 0.0014 31.8 3.1 28 199-226 78-105 (483)
301 2wan_A Pullulanase; hydrolase, 24.8 36 0.0012 35.4 2.7 30 199-228 531-560 (921)
302 1m53_A Isomaltulose synthase; 24.7 43 0.0015 32.5 3.2 29 199-227 92-120 (570)
303 3sho_A Transcriptional regulat 24.7 2.5E+02 0.0086 21.9 10.0 34 178-218 86-119 (187)
304 3m1a_A Putative dehydrogenase; 24.3 1.8E+02 0.0061 24.6 7.0 48 108-157 10-58 (281)
305 3m0z_A Putative aldolase; MCSG 24.1 45 0.0015 27.9 2.6 35 191-226 191-225 (249)
306 3rcn_A Beta-N-acetylhexosamini 23.8 37 0.0013 32.8 2.5 75 144-218 163-242 (543)
307 3h7a_A Short chain dehydrogena 23.6 3E+02 0.01 22.9 8.1 48 108-157 12-63 (252)
308 1ji1_A Alpha-amylase I; beta/a 23.5 43 0.0015 33.1 2.9 31 197-227 236-270 (637)
309 1uok_A Oligo-1,6-glucosidase; 23.3 48 0.0016 32.1 3.2 29 199-227 78-106 (558)
310 3edf_A FSPCMD, cyclomaltodextr 23.2 46 0.0016 32.6 3.0 30 198-227 197-226 (601)
311 3vgf_A Malto-oligosyltrehalose 23.2 32 0.0011 33.4 1.9 30 198-227 166-195 (558)
312 3dhu_A Alpha-amylase; structur 23.1 37 0.0013 31.8 2.3 29 198-226 82-110 (449)
313 2gm5_A Transposon gamma-delta 22.7 2.4E+02 0.0083 21.1 6.7 20 198-217 71-90 (139)
314 1gjw_A Maltodextrin glycosyltr 22.5 27 0.00093 34.5 1.3 29 199-227 181-209 (637)
315 3aml_A OS06G0726400 protein; s 22.5 39 0.0013 34.2 2.4 32 197-228 248-279 (755)
316 1yht_A DSPB; beta barrel, hydr 22.1 41 0.0014 30.7 2.3 70 143-218 40-113 (367)
317 3tla_A MCCF; serine protease, 22.0 1.3E+02 0.0043 27.4 5.5 79 125-205 40-134 (371)
318 3tzq_B Short-chain type dehydr 21.8 2.9E+02 0.01 23.2 7.8 49 108-157 16-64 (271)
319 2vr5_A Glycogen operon protein 21.8 55 0.0019 32.9 3.4 30 199-228 266-295 (718)
320 3aj7_A Oligo-1,6-glucosidase; 21.7 54 0.0018 32.0 3.2 30 198-227 86-115 (589)
321 3grp_A 3-oxoacyl-(acyl carrier 21.6 1.7E+02 0.0059 24.7 6.2 48 108-157 32-80 (266)
322 4h1h_A LMO1638 protein; MCCF-l 21.4 1.1E+02 0.0037 27.3 4.9 79 125-205 9-103 (327)
323 4a29_A Engineered retro-aldol 21.4 1.8E+02 0.0063 24.8 6.0 78 130-218 81-158 (258)
324 1bf2_A Isoamylase; hydrolase, 21.3 61 0.0021 32.8 3.6 30 199-228 272-301 (750)
325 2zic_A Dextran glucosidase; TI 21.3 52 0.0018 31.7 3.0 29 199-227 78-106 (543)
326 2gjh_A Designed protein; oblig 21.3 89 0.0031 18.7 2.8 26 384-409 5-30 (62)
327 2wsk_A Glycogen debranching en 21.2 45 0.0015 33.1 2.6 30 199-228 241-270 (657)
328 2whl_A Beta-mannanase, baman5; 21.0 46 0.0016 28.9 2.3 24 198-221 62-85 (294)
329 2ze0_A Alpha-glucosidase; TIM 21.0 53 0.0018 31.8 3.0 29 199-227 78-106 (555)
330 2zr9_A Protein RECA, recombina 20.9 2.5E+02 0.0086 25.0 7.3 115 100-218 60-193 (349)
331 2vt1_B Surface presentation of 20.9 47 0.0016 23.4 1.9 23 199-221 26-48 (93)
332 4e6p_A Probable sorbitol dehyd 20.7 2.1E+02 0.0072 23.9 6.6 48 108-157 13-61 (259)
333 1u94_A RECA protein, recombina 20.1 2.5E+02 0.0087 25.1 7.2 113 100-218 62-195 (356)
No 1
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=7.5e-62 Score=464.41 Aligned_cols=398 Identities=43% Similarity=0.762 Sum_probs=347.2
Q ss_pred ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283 6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV 85 (410)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a 85 (410)
..|+|++|.+.|+|+|+.+.++++.++++ +|||++|.|.|+.|.|++++.|++|.....+.+..+.|.|..|.++||++
T Consensus 17 ~~~~~~~v~~~p~d~i~~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~a 95 (420)
T 4h51_A 17 TAERWQKIQAQAPDVIFDLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDE 95 (420)
T ss_dssp HHHHHHTCCCCCCCHHHHHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHH
T ss_pred hhHHHhCCCCCCCChHHHHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHH
Confidence 34568889999999999999999999876 89999999999999999899999998887766665679999999999999
Q ss_pred HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-h-CCCCEEEEcCCCCcchhhhhhhCCCCc-cceeeecCCC
Q 015283 86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-Y-FPGAKVLISSPTWGNHKNIFNDARVPW-SEYRYYDPKT 162 (410)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~-~~v~~~~~~~ 162 (410)
+++++.+.. ...+++..++|.|||+|+..++.++.. + .|||+|++++|+|++|..+++..|.+. ..++..+.++
T Consensus 96 ia~~~~g~~---~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~ 172 (420)
T 4h51_A 96 AVKIIYGNT---VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKT 172 (420)
T ss_dssp HHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGG
T ss_pred HHHHhcCCC---ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccc
Confidence 999986653 234677778899999999887665543 2 499999999999999999999999974 4566666677
Q ss_pred cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh
Q 015283 163 VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 242 (410)
Q Consensus 163 ~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 242 (410)
+.+|.+.+.+.+...+++++++++++||||||.+++.++|++|+++|+++++++|+|++|++|.+++.+.+.+.++...+
T Consensus 173 ~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~ 252 (420)
T 4h51_A 173 VSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFAR 252 (420)
T ss_dssp TEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred cCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHh
Confidence 88999999998887777889999999999999999999999999999999999999999999998654444555555566
Q ss_pred cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283 243 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 243 ~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 322 (410)
..+.++++.||||.|+++|||+||+++++...+...++...+....+.++++++..+|.++...+.++.+..+|+++++.
T Consensus 253 ~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~ 332 (420)
T 4h51_A 253 RGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSA 332 (420)
T ss_dssp TTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred hCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 77799999999999999999999998877777777778888887888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHH
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l 402 (410)
++++++++|+.+.+.|+ +.|..+.|.++.++.|+|.|.+++.++++.| +++||++.|+||||++++++++|++++++|
T Consensus 333 m~~r~~~~R~~l~~~L~-~~g~~~~~~~i~~q~GmF~~~gls~e~v~~L-~e~~Vy~~~~gRis~Agl~~~ni~~~a~aI 410 (420)
T 4h51_A 333 MAERIRTMRRTVYDELL-RLQTPGSWEHVINQIGMFSFLGLSKAQCEYC-QNHNIFITVSGRANMAGLTHETALMLAQTI 410 (420)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTCSSCCTHHHHCCSSEEECCCCHHHHHHH-HHTTEECCTTCEEEGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCCeecCCCceEEecCcCHHHHHHH-HhCCEEEcCCCEEEeccCCHHHHHHHHHHH
Confidence 99999999999999999 9887666777888999999999999888665 568999999999999999999999999999
Q ss_pred HHHhhhc
Q 015283 403 IDSYHNV 409 (410)
Q Consensus 403 ~~~l~~~ 409 (410)
.++++++
T Consensus 411 ~~vvr~i 417 (420)
T 4h51_A 411 NDAVRNV 417 (420)
T ss_dssp HHHHC--
T ss_pred HHHHHHh
Confidence 9999875
No 2
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=8.9e-60 Score=450.24 Aligned_cols=399 Identities=27% Similarity=0.539 Sum_probs=334.1
Q ss_pred ccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhh-ccCCCccCcCCcccHHHHHHH
Q 015283 8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVT 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-~~~~~~~y~~~~g~~~lr~ai 86 (410)
|+|+++...++++++++.++++++..+++|||+.|.|.|..+.+++++.++++.. .. .....+.|++..|.++||+++
T Consensus 3 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~ai 81 (405)
T 3k7y_A 3 KLLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLT 81 (405)
T ss_dssp CGGGGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHH
T ss_pred chhhcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHH
Confidence 6799999999999999999999988889999999998677776666899999876 43 333347899999999999999
Q ss_pred HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283 87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 166 (410)
Q Consensus 87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 166 (410)
++++.+.++..++++++.++.|.||++|+.++..++..+.| |+|++++|+|+.|...++..|++++.+|+.+++++++|
T Consensus 82 a~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 160 (405)
T 3k7y_A 82 QNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDIN 160 (405)
T ss_dssp HHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEEC
T ss_pred HHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcC
Confidence 99997777666667765223399999999998666644448 99999999999999999999999999998656678999
Q ss_pred hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283 167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246 (410)
Q Consensus 167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 246 (410)
++.+++.+.+.++...++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++.+.+..++..+....++
T Consensus 161 ~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 240 (405)
T 3k7y_A 161 YDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIA 240 (405)
T ss_dssp HHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCC
T ss_pred HHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCc
Confidence 99999999753333455554556999999999999999999999999999999999999875322334455555555679
Q ss_pred EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 326 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 326 (410)
+++++||||+|+++|||+||++++++++++++++...+....+..+++++.++|.++..+|.++.+.+.|.+++++++++
T Consensus 241 ~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~ 320 (405)
T 3k7y_A 241 FSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQR 320 (405)
T ss_dssp EEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999976677888888887777766666677888899999999999887778899999999999
Q ss_pred HHHHHHHHHHHhhh---ccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHH
Q 015283 327 IKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAII 403 (410)
Q Consensus 327 ~~~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~ 403 (410)
++++|+.+.+.|++ ++|....+.+.++++|+|+|++++.+++.++ +++||.+.|+||||+++++++++++++++|+
T Consensus 321 ~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~~~~~~L-~~~gV~v~p~~Ris~a~~~~~~i~~~~~~i~ 399 (405)
T 3k7y_A 321 ITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEHL-KTHHIYIINNGRINVSGITKNNVDYIADKIC 399 (405)
T ss_dssp HHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGGGGTTTT-TTTTEECCTTSEEEGGGCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCHHHHHHH-HHCCEeecCCCeEEEeccCHHHHHHHHHHHH
Confidence 99999999999862 3553334677889999999998877777777 7789999999999999889999999999999
Q ss_pred HHhhhc
Q 015283 404 DSYHNV 409 (410)
Q Consensus 404 ~~l~~~ 409 (410)
++++++
T Consensus 400 ~~~~~~ 405 (405)
T 3k7y_A 400 LSLSQI 405 (405)
T ss_dssp HHHHCC
T ss_pred HHHhhC
Confidence 998753
No 3
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=2e-55 Score=427.87 Aligned_cols=404 Identities=42% Similarity=0.760 Sum_probs=344.1
Q ss_pred eecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhh--ccCCCccCcCCcccHHH
Q 015283 5 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML--ERGENKEYLPIEGLAAF 82 (410)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~l 82 (410)
..||.|+++...++++++.+.++++.+.++.+|||+.|.|+|..+++++.+.+.+++.+.. .......|.+..|.+++
T Consensus 20 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~l 99 (448)
T 3meb_A 20 GSMSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLF 99 (448)
T ss_dssp --CCTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHH
T ss_pred chhhHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHH
Confidence 4589999999999999999999999998888999999999999998888899999977665 22234789889999999
Q ss_pred HHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCCccceeee
Q 015283 83 NKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVPWSEYRYY 158 (410)
Q Consensus 83 r~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~ 158 (410)
|+++++++.+.....+++++|++++|+||++++.++..+++.+.+||+|++++|+|..+...++ ..|.+++.+++.
T Consensus 100 r~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~ 179 (448)
T 3meb_A 100 LEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYL 179 (448)
T ss_dssp HHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCB
T ss_pred HHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecc
Confidence 9999999854433223468999888999999999876567778899999999999999999999 999999999986
Q ss_pred cCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh
Q 015283 159 DPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 237 (410)
Q Consensus 159 ~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 237 (410)
+.+ ++.+|++.+++.+++.+++++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.+.+.+++
T Consensus 180 ~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~ 259 (448)
T 3meb_A 180 RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAV 259 (448)
T ss_dssp CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHH
T ss_pred ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhH
Confidence 555 6899999999999865456888889999999999999999999999999999999999999999975322334566
Q ss_pred HHHhhcCCcEEEEecccccccccCCCcceEEEEe--------CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC--------SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 238 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
..+....++++++.|+||.||++|+|+||+.+++ ++++..+.+...+....+..+++++.+++.++..+|.+
T Consensus 260 ~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 339 (448)
T 3meb_A 260 RMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHD 339 (448)
T ss_dssp HHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred HHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcC
Confidence 6665667799999999999999999999985555 56655556776676666667778999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-----CcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC-C
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK-----DWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-G 383 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~-g 383 (410)
.++...|.+++++.+++++++++++.+.|+ +++.++ .+....+++++|.|.+++.+++.++++++||++.|| |
T Consensus 340 ~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gV~v~~G~g 418 (448)
T 3meb_A 340 KRLLQMFYDNVKEMSARIHRMRSLLHASLA-KRKTPGPGSKGTWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKAGG 418 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCSTTTCCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEEECSGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCCCcCcccccceeCCCceEEEecCCCHHHHHHHHHhCCEEEeCCCc
Confidence 888888988999999999999999999998 886433 356677899999999999888999988889999995 5
Q ss_pred eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 384 RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|||++.++++++++++++|+++++++
T Consensus 419 Ris~a~~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 419 RMSMCGLTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHHHHHS
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 99998878899999999999998754
No 4
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=2.7e-55 Score=423.94 Aligned_cols=399 Identities=41% Similarity=0.753 Sum_probs=342.0
Q ss_pred eecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283 5 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK 84 (410)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 84 (410)
.-||.+.++...++++++.+...+..+..+++|||+.|.++++.+.+++++.+++++.+.+.......|.+..|.+++|+
T Consensus 20 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 99 (420)
T 4f4e_A 20 GSMSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDA 99 (420)
T ss_dssp --CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHH
T ss_pred cccCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHH
Confidence 45788999999999999999999988877899999999887777877767999999988876544478999999999999
Q ss_pred HHHHHhcCCCCCcccCC--ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCC
Q 015283 85 VTAELLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKT 162 (410)
Q Consensus 85 aia~~~~~~~~~~~~~~--~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 162 (410)
++++++.+..+..++++ +|++ |+||++++.++++++..+.+||+|++++|+|.++...++..|.+++.+++.++++
T Consensus 100 ~ia~~l~~~~~~~~~~~~~~i~~--t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~ 177 (420)
T 4f4e_A 100 SVQKLLLGDDSPLIAAGRVVTAQ--ALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKT 177 (420)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEE--EEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTT
T ss_pred HHHHHhcCCCccccccCceEEEE--CCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeecccc
Confidence 99999977766555678 8888 9999999999876666788999999999999999999999999999999865677
Q ss_pred cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh
Q 015283 163 VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 242 (410)
Q Consensus 163 ~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 242 (410)
+.+|++.+++.+++.+++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ .+.+..++..+..
T Consensus 178 ~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~-~~~~~~~~~~~~~ 256 (420)
T 4f4e_A 178 NGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGES-IEADAAAVRLFAA 256 (420)
T ss_dssp TEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSC-TTGGGHHHHHHHH
T ss_pred CccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCC-cchhhHHHHHHHh
Confidence 899999999999865557889999999999999999999999999999999999999999999975 2233445555555
Q ss_pred cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283 243 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 243 ~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 322 (410)
..+++++++|+||.+|++|+|+||+++++++++.++++...+....+..+++++.+++.++..++.+..+...|.+++++
T Consensus 257 ~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 336 (420)
T 4f4e_A 257 ANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGE 336 (420)
T ss_dssp TTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 67799999999999999999999986556677777776666665555567778888888888889988877778888999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHH
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 402 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l 402 (410)
.+++++++++++.+.|+ +++....+.+..+++++|+|++++.+.+.++++++||.+.|++|||++.++++++++++++|
T Consensus 337 ~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gI~v~~~~Ris~~~~~~~~i~~~~~~l 415 (420)
T 4f4e_A 337 MRDRIRAMRNGLVERLK-AAGIERDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAI 415 (420)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTCSSCCTHHHHSCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCCCceeECCCccEEEEeCCCHHHHHHHHHhCCEEecCCCeEEEecCCHHHHHHHHHHH
Confidence 99999999999999998 87422125777788999999999888888888878999999999999877899999999999
Q ss_pred HHHhh
Q 015283 403 IDSYH 407 (410)
Q Consensus 403 ~~~l~ 407 (410)
+++++
T Consensus 416 ~~~l~ 420 (420)
T 4f4e_A 416 AAVLK 420 (420)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99863
No 5
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=3.1e-55 Score=421.03 Aligned_cols=400 Identities=50% Similarity=0.903 Sum_probs=341.3
Q ss_pred cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 86 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai 86 (410)
.|.|+.+...++++++++.+.++.+.++.+|||+.|.|+|..+++++.+.+.+++.+.........|.+..|.+++|+++
T Consensus 1 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 80 (401)
T 7aat_A 1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS 80 (401)
T ss_dssp CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred CChhhcCCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHH
Confidence 37799999999999999999999988888999999999888888887889999888776532347898889999999999
Q ss_pred HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283 87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 165 (410)
Q Consensus 87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (410)
++++.+.++..+++++|+++.|+||++++.++...+.. +.+||+|++++|+|..|...++..|.+++.+++.+++++.+
T Consensus 81 a~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 160 (401)
T 7aat_A 81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL 160 (401)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred HHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCcc
Confidence 99998888888889999776689999999988655543 36899999999999999999999999999999866667899
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
|++.+++.+++.+++++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.+.+.+++..+....+
T Consensus 161 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T 7aat_A 161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240 (401)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCC
Confidence 99999888876545788888999999999999999999999999999999999999999987532113344544456678
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
++++++|+||.||++|+|+||++++.++++..+.+...+....+..+.+++..++.++..++.++++...|.+++++.++
T Consensus 241 ~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (401)
T 7aat_A 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD 320 (401)
T ss_dssp CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999997655677766666666666655566678888888888889888888888888999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHH
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~ 405 (410)
+++++++++.+.|+ +++....+.+..+++++|.|++++.+.+.++++++||.+.|++||+++..+++++++++++|+++
T Consensus 321 ~~~~~r~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~ 399 (401)
T 7aat_A 321 RIISMRTQLVSNLK-KEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV 399 (401)
T ss_dssp HHHHHHHHHHHHHH-HTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-hcCCCCCCceecCCcceEEecCCCHHHHHHHHHhCCEeccCCCeEEeccCChhhHHHHHHHHHHH
Confidence 99999999999998 88643345677789999999999988888888888999999999999987888899999999988
Q ss_pred hh
Q 015283 406 YH 407 (410)
Q Consensus 406 l~ 407 (410)
++
T Consensus 400 ~~ 401 (401)
T 7aat_A 400 TK 401 (401)
T ss_dssp HC
T ss_pred hC
Confidence 63
No 6
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.4e-53 Score=410.62 Aligned_cols=396 Identities=42% Similarity=0.765 Sum_probs=316.2
Q ss_pred ecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283 6 NVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV 85 (410)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a 85 (410)
.-|.|+++...++++++.+.++++++..+++|||+.|.|+|..+++.+.+.+.++ .... ...|.+..|.+++|++
T Consensus 13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a----~~~~-~~~y~~~~g~~~lr~~ 87 (409)
T 4eu1_A 13 EAQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA----TLGT-NMDYAPVTGIASFVEE 87 (409)
T ss_dssp --------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTC----CCCS-CCCCCCTTCCHHHHHH
T ss_pred hhhHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhc----Cccc-cccCCCCCCcHHHHHH
Confidence 3478999999999999999999999888899999999987766665545555544 3223 4789889999999999
Q ss_pred HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283 86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 164 (410)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 164 (410)
+++++.+..+..+++++|.+..|.||++++.++..++..+ .+||+|++++|+|..+...++..|.+++.+++.+++++.
T Consensus 88 ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 167 (409)
T 4eu1_A 88 AQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKG 167 (409)
T ss_dssp HHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTE
T ss_pred HHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCc
Confidence 9999866554444567886555899999999876555544 489999999999999999999999999999986667789
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
+|++.+++.+++.++.++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++...+..++..+.+..
T Consensus 168 ~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 247 (409)
T 4eu1_A 168 LNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMV 247 (409)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTS
T ss_pred CcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhC
Confidence 99999999997644567888889999999999999999999999999999999999999998753111234444444556
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 324 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 324 (410)
+++++++||||.+|++|+|+||+.+++++++..+.+...+....+..+.+++.+++.++...|++..+...|.+++++.+
T Consensus 248 ~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 327 (409)
T 4eu1_A 248 PNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMS 327 (409)
T ss_dssp SCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 78999999999999999999997545667786666666666555555667888898999889998877777888889999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHH
Q 015283 325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~ 404 (410)
++++++++++.+.|+ ++|.+..+.+..+++++|.|++++.+++.++++++||.+.|++||+++..+++++++++++|++
T Consensus 328 ~~~~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~p~~Ri~~~~~~~~~i~~~~~~l~~ 406 (409)
T 4eu1_A 328 SRIAEVRKRLVSELK-ACGSVHDWSHIERQVGMMAYTGLTREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHN 406 (409)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCSCCHHHHHSCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-hcCCCCCcceecCCceEEEEeCCCHHHHHHHHHcCCEEEcCCCEEEEEecCHhhHHHHHHHHHH
Confidence 999999999999999 8874443566778999999999988888899887899999999999998889999999999998
Q ss_pred Hhh
Q 015283 405 SYH 407 (410)
Q Consensus 405 ~l~ 407 (410)
+++
T Consensus 407 ~l~ 409 (409)
T 4eu1_A 407 VTK 409 (409)
T ss_dssp HHC
T ss_pred HhC
Confidence 863
No 7
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.9e-52 Score=401.10 Aligned_cols=393 Identities=40% Similarity=0.717 Sum_probs=334.1
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHH-hhccCCCccCcCCcccHHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
++.+...++++++.+.+.+..+..+++|||+.|.|+|..+.+++++.+.+++.+ .+.......|++..|..++|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~ 81 (397)
T 3fsl_A 2 FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAP 81 (397)
T ss_dssp CTTCCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHH
Confidence 567889999999999999998888899999999887777877777999999998 7765444789888999999999999
Q ss_pred HhcCCCCCcccCC--ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccC
Q 015283 89 LLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 166 (410)
Q Consensus 89 ~~~~~~~~~~~~~--~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 166 (410)
++....+..++++ +|++ |+||++++.++.+++..+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|
T Consensus 82 ~~~~~~~~~~~~~~~~i~~--t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 159 (397)
T 3fsl_A 82 LLFGADHPVLKQQRVATIQ--TLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVR 159 (397)
T ss_dssp HHHCTTCHHHHTTCEEEEE--ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEEC
T ss_pred HHhcCCcccccccceEEEE--cCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCc
Confidence 9877666555678 8888 99999999998766666789999999999999999999999999999998656778999
Q ss_pred hhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283 167 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246 (410)
Q Consensus 167 ~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 246 (410)
++.+++.+++.+++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ .+.+..++..+....++
T Consensus 160 ~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~ 238 (397)
T 3fsl_A 160 FNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLP 238 (397)
T ss_dssp HHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSC-TTGGGHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccC-cccccHHHHHHHhcCCC
Confidence 99999999865457889999999999999999999999999999999999999999999865 22233455455556779
Q ss_pred EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 326 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 326 (410)
+++++|+||.+|++|+|+||+++.+++++.++++...+....+..+.+++.+++.++...+.+..+...|.+++++.+++
T Consensus 239 ~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 318 (397)
T 3fsl_A 239 ALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTR 318 (397)
T ss_dssp EEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999865456777777666666555455666778888888888899887777778888999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283 327 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 327 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l 406 (410)
++++++++.+.|+ +.+....+.+..+++++|.|++++.+.+.++++++||.+.|++||+++..+++++++++++|++++
T Consensus 319 ~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~Ris~~~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 319 ILAMRQELVKVLS-TEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HHHHHHHHHHHHH-HHCTTSCCTHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-hcCCCCCceeecCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEEecCHhhHHHHHHHHHhhC
Confidence 9999999999998 774211256677888999999998888888888889999999999998878899999999999874
No 8
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-50 Score=387.78 Aligned_cols=402 Identities=41% Similarity=0.746 Sum_probs=326.3
Q ss_pred cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHH-hhccCCCccCcCCcccHHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKV 85 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~a 85 (410)
||.|+++...++++++.+.+.+..+..+++|||+.|.|+|.++++++++.+.+++.+ .+.......|.+..|.+++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 81 (412)
T 1yaa_A 2 ATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN 81 (412)
T ss_dssp TTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred cchhccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHH
Confidence 788999999999999999888887766789999999998888877778999999988 7754334679888999999999
Q ss_pred HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283 86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 165 (410)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (410)
+++++.+.++..+++++|++++|+||++++.++..++..+.+||+|++++|+|..+...++..|.+++.+++.+++++.+
T Consensus 82 ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 161 (412)
T 1yaa_A 82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSL 161 (412)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEE
T ss_pred HHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCcc
Confidence 99998776676667889988778999999999866666677999999999999999999999999999998744456889
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
|++.+++.+++.++.++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++...+..++..+....+
T Consensus 162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (412)
T 1yaa_A 162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLS 241 (412)
T ss_dssp CHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCC
Confidence 99999999976433467777799999999999999999999999999999999999999886420002223333333445
Q ss_pred ---cEEEEecccccccccCCCcceEEEEe----CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283 246 ---ELLVAQSYSKNLGLYAERIGAMNVVC----SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 318 (410)
Q Consensus 246 ---~~i~~~S~sK~~~~~G~r~G~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~ 318 (410)
++++++|+||.+|++|+|+||+++++ ++++..+.+...+....+..+.+++.+++.++...|++..+.+.|.+
T Consensus 242 ~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 321 (412)
T 1yaa_A 242 TVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHK 321 (412)
T ss_dssp TTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHH
Confidence 79999999999998899999984224 25553334444444433445566788888888888888766666677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHH
Q 015283 319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYL 398 (410)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~ 398 (410)
++++.+++++++++++.+.|+ +++..+.+.+..+.+++|+|.+++.+.+.++++++||.+.+..||+++..++++++++
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~ 400 (412)
T 1yaa_A 322 DMVTMSSRITKMRHALRDHLV-KLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhCCCCCeeeeccCceEEEeeCCCHHHHHHHHHhCCEEeccCcEEEEccCCHhHHHHH
Confidence 889999999999999999998 8762112466678889999998887777888877899999977999986689999999
Q ss_pred HHHHHHHhhhc
Q 015283 399 ADAIIDSYHNV 409 (410)
Q Consensus 399 ~~~l~~~l~~~ 409 (410)
+++|+++++.+
T Consensus 401 ~~~l~~~~~~~ 411 (412)
T 1yaa_A 401 AKAIDEVVRFY 411 (412)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999998754
No 9
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=1.3e-49 Score=383.17 Aligned_cols=401 Identities=46% Similarity=0.823 Sum_probs=326.8
Q ss_pred ccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhc-cCCCccCcCCcccHHHHHHH
Q 015283 8 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-RGENKEYLPIEGLAAFNKVT 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~y~~~~g~~~lr~ai 86 (410)
|.|+++...+++++..+.+.+.++..+++|||+.|.|++..+++++++.+.+++.+... ....+.|.+..|..++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp CTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred chhhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence 56888999999999998888877656789999999987777766667999999988762 22346798889999999999
Q ss_pred HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC-----CEEEEcCCCCcchhhhhhhCCCC-ccceeeecC
Q 015283 87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-----AKVLISSPTWGNHKNIFNDARVP-WSEYRYYDP 160 (410)
Q Consensus 87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~~ 160 (410)
++++.+.++..+++++|++++|+||+++++++..++..+.+| |+|++++|+|..+...++..|.+ ++.+++.++
T Consensus 84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 163 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT 163 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence 999867666666788988777899999999986666667899 99999999999999999999999 999988655
Q ss_pred CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 161 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 161 ~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
+++.+|++.+++.+.+.+++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++.+...+++..+
T Consensus 164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 243 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243 (412)
T ss_dssp TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence 67889999999998764456788878999999999999999999999999999999999999999864200122344434
Q ss_pred hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 320 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 320 (410)
....++++++.|+||.+|++|+|+||+++..++++..+.+...+......++.+++.+++.++...|++..+...|.+++
T Consensus 244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 323 (412)
T 1ajs_A 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNV 323 (412)
T ss_dssp HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred hccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHH
Confidence 44457899999999999999999999843224677666665555544444566667888888888888776555566778
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHH
Q 015283 321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLAD 400 (410)
Q Consensus 321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~ 400 (410)
++.+++++++++++.+.|+ +++.+..+.+..+.+++|.|++++.+++.++++++||.+.|+.||+++..++++++++++
T Consensus 324 ~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~Ris~~~~~~~~i~~~~~ 402 (412)
T 1ajs_A 324 KTMADRILSMRSELRARLE-ALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVAT 402 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-hhCCCCCeeEEcCCCceEEEeCCCHHHHHHHHHhCCEEecCCcEEEeeeCCHHHHHHHHH
Confidence 8999999999999999998 875222246667888999999888777888887789999998999998668999999999
Q ss_pred HHHHHhhhc
Q 015283 401 AIIDSYHNV 409 (410)
Q Consensus 401 ~l~~~l~~~ 409 (410)
+|+++++++
T Consensus 403 ~l~~~l~~~ 411 (412)
T 1ajs_A 403 SIHEAVTKI 411 (412)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999998765
No 10
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=3.7e-49 Score=378.01 Aligned_cols=395 Identities=44% Similarity=0.775 Sum_probs=303.0
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
|++++..++++++.+...+.....+++|||+.|.+++..+.++.++.+.+++.+.+.......|.+..|..++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 81 (396)
T 2q7w_A 2 FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQEL 81 (396)
T ss_dssp CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccCCCchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHH
Confidence 67788999999988887777665578999999998776665555799999988876433346798889999999999999
Q ss_pred hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283 90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169 (410)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 169 (410)
+.+..+..+++++|+++.|+||+++++++..++..+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++.
T Consensus 82 ~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 161 (396)
T 2q7w_A 82 LFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDA 161 (396)
T ss_dssp HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHH
T ss_pred HhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHH
Confidence 86655444567888755589999999998666655679999999999999999999999999999988544678899999
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+++.+.+.+++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ .....++..+....+++++
T Consensus 162 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~i~ 240 (396)
T 2q7w_A 162 LINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGL-EEDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCH-HHHTHHHHHHHHHCSCEEE
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCc-cchhHHHHHHHhcCCcEEE
Confidence 999997643457888889999999999999999999999999999999999999988641 0122344434444578999
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
++|+||.+|++|+|+||+++.+++++..+.+...+....+..+..++.+++.++...|++..+.+.|.+++++.++++++
T Consensus 241 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~ 320 (396)
T 2q7w_A 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQR 320 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred EEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999842124565555566555544444555678888888888888865555567778899999999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHHh
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~l 406 (410)
+++++.+.|+ +.+.+..+.+..+.+++|+|++++.+.+.++++++||.+.|+.||+++..+++++++++++|++++
T Consensus 321 ~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 321 MRQLFVNTLQ-EKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHHHH-HTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHH-hcCCCCCcceecCCCceEEEecCCHHHHHHHHHhcCeeecCCceEEEeecCHHHHHHHHHHHHhcC
Confidence 9999999998 876211246667888999999888777778777789999998899998668999999999998864
No 11
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=5.8e-48 Score=369.51 Aligned_cols=391 Identities=38% Similarity=0.664 Sum_probs=313.5
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
|.++...++++++.+.+.+..+..+++|||+.|.|++..+.+++++.+.+++.+.+.......|++..|..++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 81 (394)
T 2ay1_A 2 LGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGEL 81 (394)
T ss_dssp GGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHH
T ss_pred CccCccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHH
Confidence 67788999999999888888776678999999998666664555799999988876433346798888999999999999
Q ss_pred hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283 90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169 (410)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 169 (410)
+.+. .+++++|++++|+||+++++++..++..+.+||+|+++.|+|..+...++..|.+++.+++.+++++.+|++.
T Consensus 82 ~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 158 (394)
T 2ay1_A 82 ILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEG 158 (394)
T ss_dssp HHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHH
T ss_pred HhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHH
Confidence 7433 1246788765689999999998666655569999999999999999999999999999998654678899999
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+++.+++.+++++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++ ..+..++..+....+++++
T Consensus 159 l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~i~ 237 (394)
T 2ay1_A 159 MKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGL-EEDAAGTRLIASRIPEVLI 237 (394)
T ss_dssp HHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCH-HHHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCc-ccchHHHHHHhhcCCCEEE
Confidence 999998643457788889999999999999999999999999999999999999988531 0022334334444568999
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
++|+||.+|++|+|+||+++.++++++++.+...+....+..+.+++.+++.++...|++.++...|.+++++.++++++
T Consensus 238 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~ 317 (394)
T 2ay1_A 238 AASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLR 317 (394)
T ss_dssp EEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999843224666666666655544444555667888888888888765555567778899999999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCCCeEEecCCCcccHHHHHHHHHHH
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~gRis~~~~~~~~i~~~~~~l~~~ 405 (410)
+++++.+.|+ +++....+.+..+.+++|+|++++.+.+.++++++||.+.|+.||+++..+++++++++++|+++
T Consensus 318 ~~~~l~~~L~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 318 LREQLAGELR-DLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp HHHHHHHHHH-HHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCCCCCeeEEcCCceEEEeeCCCHHHHHHHHHhCCEEecCCCeEEeecCCHhhHHHHHHHHHHc
Confidence 9999999998 77521124566678899999988877777777778999999889999866899999999999886
No 12
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=4.7e-47 Score=366.07 Aligned_cols=386 Identities=22% Similarity=0.290 Sum_probs=303.2
Q ss_pred ccCCCCCCCCCcccchhHhhhcCC----CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTD----EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV 85 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a 85 (410)
..+....++++++.+.+++.++.. .++|+|+.|.|+|..+.+++++.+.+++.+...... ..|.+..|.+++|++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ 88 (418)
T 3rq1_A 10 KHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGYAPIAGIPDFLCA 88 (418)
T ss_dssp TTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSCCCTTCCHHHHHH
T ss_pred hhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCCCCCCChHHHHHH
Confidence 344566778888888877765543 378999999998887777778999998877554332 679888999999999
Q ss_pred HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283 86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 165 (410)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (410)
+++++.+.++.. .+++|++ |+||++++..++. ..+.+||+|++++|+|..|...++..|.+++.+++.++ ++.+
T Consensus 89 ia~~~~~~~~~~-~~~~i~~--t~g~~~al~~~~~--~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~ 162 (418)
T 3rq1_A 89 AEKECFGNFRPE-GHIRSIA--TAGGTGGIHHLIH--NYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDE-HNNF 162 (418)
T ss_dssp HHHHHHGGGCCS-SEEEEEE--ESHHHHHHHHHHH--HHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCT-TSSB
T ss_pred HHHHHhcccCcc-ccccEEE--CCchHHHHHHHHH--HhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCC-CCCc
Confidence 999986654422 1238888 9999999999843 44779999999999999999999999999999998533 3789
Q ss_pred ChhhHHHHHhcC--CCCcEEEEeCCC-CCCCCCCCCHHHHHHHHHHHH------HcCCcccccccCCCCCCCCCCCchhH
Q 015283 166 DFEGMIADIKAA--PGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQ------EKNHIPFFDVAYQGFASGSLDNDASS 236 (410)
Q Consensus 166 d~~~l~~~i~~~--~~~~~~ii~~~p-~NPtG~~~~~~~l~~i~~~~~------~~~~~li~Deay~~~~~~~~~~~~~~ 236 (410)
|++.+++.+.+. ++.+.++++++| |||||.+++.+++++|+++|+ +||+++|+||+|.++.+.+ ....+
T Consensus 163 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~--~~~~~ 240 (418)
T 3rq1_A 163 NHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEK--DEVRA 240 (418)
T ss_dssp CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCH--HHHHG
T ss_pred CHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCCh--HHHHH
Confidence 999999988741 123447777899 999999999999999999999 8999999999999888542 11111
Q ss_pred hHHHh-hcCCc--EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhH
Q 015283 237 VRLFA-TRGME--LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALF 313 (410)
Q Consensus 237 ~~~~~-~~~~~--~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 313 (410)
+.... ...++ +++++||||.+|++|+|+||+++.++++++++.+...........+++++..++.++...|++.++.
T Consensus 241 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 320 (418)
T 3rq1_A 241 FFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKF 320 (418)
T ss_dssp GGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHH
Confidence 11111 12234 5889999999999999999985444588877777665443333345567888888888999988776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-CHHHHHHhhhcCcEEEcCCC---eEEecC
Q 015283 314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG---RISLAG 389 (410)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g---Ris~~~ 389 (410)
+.|.++.++.+++++++++++.+.|+ ++| +.+..+++++|+|+.+ +.+.+.+.++++||.+.|++ |||++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~iRis~~~ 395 (418)
T 3rq1_A 321 KEYEAERNCYYQLIRDRADIFKQEAA-QVG----LPMLPYRGGFFITIPTDSANAICEELKKEHIYVIALANGIRIAACG 395 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHT----CCCCCCCSSSEEEEECTTHHHHHHHHHHTTEECEECSSEEEEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcC----CCCCCCCceEEEEcCCCCHHHHHHHHHhCCEEEecCCCCeEEEEec
Confidence 77788888889999999999999998 887 4677888999999865 44444445566899999986 999886
Q ss_pred CCcccHHHHHHHHHHHhhhc
Q 015283 390 LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 390 ~~~~~i~~~~~~l~~~l~~~ 409 (410)
++++++++++++|+++++++
T Consensus 396 ~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 396 IPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp SCHHHHTTHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 69999999999999998764
No 13
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=3.3e-46 Score=359.58 Aligned_cols=385 Identities=18% Similarity=0.238 Sum_probs=297.1
Q ss_pred cccccCCCCCCCCCcccchhHhhhcCC----CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKADTD----EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAF 82 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l 82 (410)
|+...++...++++++.+.+++++... .++|+|+.|.|++..+...+++.+.+++.+..... ...|.+..|.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~l 84 (413)
T 3t18_A 6 MTIKRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSH-IASYAPIEGEKDY 84 (413)
T ss_dssp SSCTTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHH-HHSCCCTTCCHHH
T ss_pred hhhhhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCccc-ccCcCCCCCCHHH
Confidence 444666778889999998887765443 37899999999888877777899999887754333 2679888899999
Q ss_pred HHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCC
Q 015283 83 NKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKT 162 (410)
Q Consensus 83 r~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 162 (410)
|+++++++.+..+.. ++++|++ |+||++++..++. ..+.+||+|++++|+|..|...++..|.+++.+++.++ +
T Consensus 85 r~~la~~~~~~~~~~-~~~~i~~--t~g~~~al~~~~~--~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~ 158 (413)
T 3t18_A 85 RKIVIDTLFGPYKPE-GYISAIA--TPGGTGAIRSAIF--SYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTD-D 158 (413)
T ss_dssp HHHHHHHHHGGGCCS-SEEEEEE--ESHHHHHHHHHHH--HHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCT-T
T ss_pred HHHHHHHHhcccCcc-ccCcEEE--cCccHHHHHHHHH--HhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCC-C
Confidence 999999986654322 3448999 9999999999843 44779999999999999999999999999999998533 3
Q ss_pred cccChhhHHHHHhcC--CCCcEEEEeCCC-CCCCCCCCCHHHHHHHHHHHH------HcCCcccccccCCCCCCCCCCCc
Q 015283 163 VGLDFEGMIADIKAA--PGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQ------EKNHIPFFDVAYQGFASGSLDND 233 (410)
Q Consensus 163 ~~~d~~~l~~~i~~~--~~~~~~ii~~~p-~NPtG~~~~~~~l~~i~~~~~------~~~~~li~Deay~~~~~~~~~~~ 233 (410)
+.+|++.+++.+.+. ++...++++++| |||||.+++.+++++|+++|+ +||++||+||+|.++.+.+. .
T Consensus 159 ~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~--~ 236 (413)
T 3t18_A 159 FAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGD--Q 236 (413)
T ss_dssp SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSS--T
T ss_pred CCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChh--h
Confidence 789999999988641 123447777899 999999999999999999999 89999999999999986532 1
Q ss_pred hhHhHHHh-hcCCc--EEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283 234 ASSVRLFA-TRGME--LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 234 ~~~~~~~~-~~~~~--~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
..++.... ...++ +++++||||.+|++|+|+||+++.++++++++.+...........+.+++..++.++..++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 316 (413)
T 3t18_A 237 QRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAE 316 (413)
T ss_dssp TTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHH
T ss_pred HHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcCh
Confidence 11211111 12234 5889999999999999999985444478877777665443333345567888888888888876
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-CHHHHHHhhhcCcEEEcCCC---eEE
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG---RIS 386 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g---Ris 386 (410)
++.+ |.++.++.+++++++++++.+.|+ ++| +.+..+++++|+|++. +...+.+.+.++||.+.||+ ||+
T Consensus 317 ~~~~-~~~~~~~~~~~~~~~~~~l~~~l~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~~iRis 390 (413)
T 3t18_A 317 NKKI-YEQELVDLRNMLKSRADVFVTAAK-ENK----LTMIPYFGGFFTFIPTDKAFDIVKDLEKENIFTIPSAKGIRVA 390 (413)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HTT----CCCBCCCSSSCEEEECSCHHHHHHHHHHTTEECEECSSEEEEC
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HcC----CCccCCCceEEEEeCCCCHHHHHHHHHhCCEEEecCCCceEEE
Confidence 5444 667778889999999999999998 887 4677888999999865 44443344466799999986 999
Q ss_pred ecCCCcccHHHHHHHHHHHhhhc
Q 015283 387 LAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 387 ~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
++..+++++ +++|+++++++
T Consensus 391 ~~~~~~~~~---l~~l~~~l~~~ 410 (413)
T 3t18_A 391 ICGVGEEKI---PKLVQRLAFYT 410 (413)
T ss_dssp TTTSCGGGH---HHHHHHHHHHH
T ss_pred EeeCCHHHH---HHHHHHHHHHH
Confidence 987667776 88888777653
No 14
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=7.1e-46 Score=353.94 Aligned_cols=364 Identities=17% Similarity=0.157 Sum_probs=283.6
Q ss_pred ccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 87 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia 87 (410)
+++++..+++++..+.+.+.+. ..+++|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++..|.+++|++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia 78 (385)
T 1b5p_A 5 SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEP----DFD-TPEHVKEAARRALAQGK-TKYAPPAGIPELREALA 78 (385)
T ss_dssp CHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHH
T ss_pred hhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHH
Confidence 3446667777777766655442 2357899999987 333 26788888877765444 67988889999999999
Q ss_pred HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283 88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 167 (410)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 167 (410)
+++...++..+++++|++ |+||++++.++.. ..+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|+
T Consensus 79 ~~~~~~~g~~~~~~~i~~--t~g~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 154 (385)
T 1b5p_A 79 EKFRRENGLSVTPEETIV--TVGGSQALFNLFQ--AILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDP 154 (385)
T ss_dssp HHHHHTTCCCCCGGGEEE--ESHHHHHHHHHHH--HHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCH
T ss_pred HHHHHHhCCCCChHHEEE--cCChHHHHHHHHH--HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCH
Confidence 999877787778899999 9999999999843 347799999999999999999999999999999985445678999
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+.+++.+++ +++++++++||||||.++|.+++++|+++|++||++||+||+|..+.+++ . ..++..+ .. +++
T Consensus 155 ~~l~~~l~~---~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~--~~~~~~~-~~-~~~ 226 (385)
T 1b5p_A 155 ERVRRAITP---RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-E--HFSPGRV-AP-EHT 226 (385)
T ss_dssp HHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-C--CCCGGGT-CT-TTE
T ss_pred HHHHHhcCC---CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-C--CCCHHHc-CC-CCE
Confidence 999988864 57777889999999999999999999999999999999999999988642 1 1122222 22 689
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
++++||||.+|++|+|+||+++ ++++++++... ....+.+++.++|.++..+|++.+.. .+++++.++++
T Consensus 227 i~~~s~SK~~~~~G~RiG~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~ 296 (385)
T 1b5p_A 227 LTVNGAAKAFAMTGWRIGYACG---PKEVIKAMASV----SRQSTTSPDTIAQWATLEALTNQEAS---RAFVEMAREAY 296 (385)
T ss_dssp EEEEESTTTTTCGGGCCEEEEC---CHHHHHHHHHH----HHTTTCSCCHHHHHHHHHHHHCHHHH---HHHHHHHHHHH
T ss_pred EEEEechhhcCCcccceEEEEe---CHHHHHHHHHH----HhhccCCCCHHHHHHHHHHHhCCCcc---hHHHHHHHHHH
Confidence 9999999999999999999854 77766655443 22234467788888887777651111 23467888999
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcc
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLA 393 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~ 393 (410)
+++++++.+.|+ ++| +.+..+++++|.|+.+ +. ++.+.++ ++||.+.|| + |||++. +++
T Consensus 297 ~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~-~~~ 369 (385)
T 1b5p_A 297 RRRRDLLLEGLT-ALG----LKAVRPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYAT-SEE 369 (385)
T ss_dssp HHHHHHHHHHHH-HHT----CCBCCCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCS-CHH
T ss_pred HHHHHHHHHHHH-HCC----CeecCCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecC-CHH
Confidence 999999999998 776 4667788888888644 33 4466666 579999886 2 999985 899
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
++++++++|++++++
T Consensus 370 ~i~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 370 NLRKALERFARVLGR 384 (385)
T ss_dssp HHHHHHHHGGGGC--
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999888754
No 15
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2.1e-45 Score=355.37 Aligned_cols=375 Identities=13% Similarity=0.139 Sum_probs=280.1
Q ss_pred ccCCCCCCCCCcccchhHhhhcCC--CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTD--EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 87 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia 87 (410)
++.+...++++|..+.+.++.+.+ +++|+|+.|.+ +..+..++++.+++++.+.+.......|.+..|..++|++++
T Consensus 28 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~l~~g~~-~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la 106 (427)
T 3dyd_A 28 PSDMAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGDP-TVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIA 106 (427)
T ss_dssp CCC----------------CCCCCTTSCCEECCCSCT-TTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHH
T ss_pred hhhHhhcccchHHHHHHHHhhcccCCCCEEeCCCcCC-CccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHH
Confidence 467777888999999888877654 36799999997 444444558999999988876544468988899999999999
Q ss_pred HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283 88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 167 (410)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 167 (410)
+++.+. +..+++++|++ |+||++++.+++..+ +.+||+|+++.|+|..+...++..|.+++.+++.+++++.+|+
T Consensus 107 ~~~~~~-~~~~~~~~v~~--t~g~t~al~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 181 (427)
T 3dyd_A 107 SYYHCP-EAPLEAKDVIL--TSGCSQAIDLCLAVL--ANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDL 181 (427)
T ss_dssp HHHCBT-TBCCCGGGEEE--ESSHHHHHHHHHHHH--CCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECH
T ss_pred HHHhhc-CCCCChHHEEE--ecCcHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCH
Confidence 998765 66677899999 999999999985443 6799999999999999999999999999999997667788999
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+.+++.+++ ++.++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ....+.. .....++
T Consensus 182 ~~l~~~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~--~~~~~~~-~~~~~~v 255 (427)
T 3dyd_A 182 KQLEYLIDE---KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDC--KYEPLAT-LSTDVPI 255 (427)
T ss_dssp HHHHSSCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSC--CCCCGGG-GCSSCCE
T ss_pred HHHHHHhcc---CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCC--cCccHHH-hCCCCcE
Confidence 999988865 577778899999999999999999999999999999999999999986531 1112222 2233468
Q ss_pred EEEecccccccccCCCcceEEEEeCCc--hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSS--DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
++++|+||.|+++|+|+||+++ .++ ...+.+...+...... ..+++.+++.++..+|++.. .+.+++.++
T Consensus 256 i~~~S~sK~~~~~G~riG~~~~--~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~-----~~~~~~~~~ 327 (427)
T 3dyd_A 256 LSCGGLAKRWLVPGWRLGWILI--HDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTP-----GEFYHNTLS 327 (427)
T ss_dssp EEEEESTTTSSCGGGCCEEEEE--ECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSC-----HHHHHHHHH
T ss_pred EEEeeccccCCCcCcceEEEEe--cCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcC-----HHHHHHHHH
Confidence 9999999999999999999854 332 1111233333332222 34677888888877776321 233567888
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----------HHHHHHhhhcCcEEEcCCC--------eEEe
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISL 387 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~g--------Ris~ 387 (410)
+++++++++.+.|+ +++. +.+..+++++|+|+++. .+++.++++++||.+.||+ ||++
T Consensus 328 ~~~~~~~~l~~~L~-~~~g---~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~ 403 (427)
T 3dyd_A 328 FLKSNADLCYGALA-AIPG---LRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI 403 (427)
T ss_dssp HHHHHHHHHHHHHH-HSTT---EEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEES
T ss_pred HHHHHHHHHHHHHh-cCCC---ceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEE
Confidence 89999999999998 7721 56677888999886432 4567788766799999873 9999
Q ss_pred cCCCcccHHHHHHHHHHHhhhc
Q 015283 388 AGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 388 ~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+. +++++++++++|+++++++
T Consensus 404 ~~-~~e~i~~~l~~l~~~l~~~ 424 (427)
T 3dyd_A 404 TV-PEVMMLEACSRIQEFCEQH 424 (427)
T ss_dssp CS-CHHHHHHHHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHHHHHHHHh
Confidence 75 9999999999999998764
No 16
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=6.9e-43 Score=343.69 Aligned_cols=339 Identities=14% Similarity=0.106 Sum_probs=268.9
Q ss_pred cHHHHHHHHHhhcc--C-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCC
Q 015283 54 LDVVKKAENLMLER--G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGA 129 (410)
Q Consensus 54 ~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd 129 (410)
|+.+.++..+.+.. + ....|.+..|..++|+++++++.+.+|..+++++|++ |+|+++++.+++. ..+ .+||
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~--~l~~~~gd 183 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFL--TDGASPGVHLMMQ--LLIRNEKD 183 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEE--ESSSHHHHHHHHH--HHCCSTTE
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEE--cCCHHHHHHHHHH--HHcCCCCC
Confidence 45555555555543 1 3478999999999999999999877777778899999 9999999999843 335 6999
Q ss_pred EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
.|+++.|+|..+...++..|++++.+++.++++|.+|++.+++.+++. +.+++++++++|+||||.++|.+++++|+
T Consensus 184 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~ 263 (500)
T 3tcm_A 184 GILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIV 263 (500)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHH
Confidence 999999999999999999999999999976667899999999998752 22566777789999999999999999999
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh------cCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHH
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAAR 279 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~ 279 (410)
++|++||+++|+||+|..+.+++. ....++..+.. ...++++++|+||.| |++|+|+||+++...++++++.
T Consensus 264 ~la~~~~~~li~Deay~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 342 (500)
T 3tcm_A 264 KFCKNEGLVLLADEVYQENIYVDN-KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQ 342 (500)
T ss_dssp HHHHHHTCEEEEECTTTTCBCCTT-CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHH
T ss_pred HHHHHcCCEEEEecCccccccCCC-CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHH
Confidence 999999999999999999887421 12223322221 223589999999999 8999999998654447787777
Q ss_pred HHHHHHhhccCcccCCChhHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCC
Q 015283 280 VKSQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQ 354 (410)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~ 354 (410)
+..... ...+++..+|.++..++++. .....|.++.++.+++++++++++.+.|+ ++ | +.+..++
T Consensus 343 l~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~~g----~~~~~~~ 412 (500)
T 3tcm_A 343 IYKIAS-----VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFN-KLEG----ITCNEAE 412 (500)
T ss_dssp HHHHHH-----TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSTT----EECCCCC
T ss_pred HHHHHh-----cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCC----cEEecCC
Confidence 655332 34567888888888888742 34455677788999999999999999998 87 4 6788899
Q ss_pred cceeeecCC--CH-------------H--HHHHhhhcCcEEEcCC-------C----eEEecCCCcccHHHHHHHHHHHh
Q 015283 355 IGMFSFTGL--NK-------------A--QSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 355 ~~~~~~~~~--~~-------------~--~~~~ll~~~gi~v~~~-------g----Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
+++|.|+.+ .. + ++.++++++||++.|| | |++++ .+++++++++++|++++
T Consensus 413 g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~ 491 (500)
T 3tcm_A 413 GAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFH 491 (500)
T ss_dssp BTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHH
T ss_pred eEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHH
Confidence 999999533 22 1 2457777789999875 2 99998 59999999999999988
Q ss_pred hh
Q 015283 407 HN 408 (410)
Q Consensus 407 ~~ 408 (410)
++
T Consensus 492 ~~ 493 (500)
T 3tcm_A 492 EA 493 (500)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 17
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=4.5e-44 Score=345.67 Aligned_cols=372 Identities=15% Similarity=0.095 Sum_probs=288.2
Q ss_pred cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-CccCcCCcccHHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKV 85 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~a 85 (410)
++++.++...+++.+.++.+... ++++|+|+.|.+ ..+ +++.+.+++.+.+.... ...|++..|..++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 75 (422)
T 3fvs_A 4 QLQARRLDGIDYNPWVEFVKLAS---EHDVVNLGQGFP----DFP-PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKI 75 (422)
T ss_dssp CCSCGGGTTCCCCHHHHHHHHHH---TSCCEECCCSSC----SSC-CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHH
T ss_pred hhHHHHhhccCccHHHHHHHHhh---cCCceEeCCCCC----CCC-CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHH
Confidence 44567788888887666554433 357999999987 333 37899999888775432 3679888899999999
Q ss_pred HHHHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-----
Q 015283 86 TAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD----- 159 (410)
Q Consensus 86 ia~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----- 159 (410)
+++++...++..+++ ++|++ |+||++++..++.. .+.+||+|+++.|+|.++...++..|.+++.+++.+
T Consensus 76 la~~~~~~~g~~~~~~~~i~~--~~g~~~a~~~~~~~--~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (422)
T 3fvs_A 76 LASFFGELLGQEIDPLRNVLV--TVGGYGALFTAFQA--LVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQN 151 (422)
T ss_dssp HHHHHHHHHTCCCCHHHHEEE--ESHHHHHHHHHHHH--HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCS
T ss_pred HHHHHHHhhCCCCCCCCcEEE--ECChHHHHHHHHHH--HcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccc
Confidence 999998777777777 68999 99999999998443 377999999999999999999999999999998854
Q ss_pred -----CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283 160 -----PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 234 (410)
Q Consensus 160 -----~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 234 (410)
.+++.+|++.+++.+++ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..
T Consensus 152 G~~~~~~~~~~d~~~l~~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~ 226 (422)
T 3fvs_A 152 GELGSSSNWQLDPMELAGKFTS---RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH--QH 226 (422)
T ss_dssp SSCCBGGGSBCCHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CC
T ss_pred cccccccCCCCCHHHHHhhcCC---CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC--CC
Confidence 13567899999988864 677788899999999999999999999999999999999999999886532 12
Q ss_pred hHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhh-H
Q 015283 235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPAL-F 313 (410)
Q Consensus 235 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~-~ 313 (410)
.++..+....++++++.|+||.+|++|+|+||+++ ++++++.+.... .....+++..++.++...|++... .
T Consensus 227 ~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~ 299 (422)
T 3fvs_A 227 ISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG---PDHIMKHLRTVH----QNSVFHCPTQSQAAVAESFEREQLLF 299 (422)
T ss_dssp CCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEEC---CHHHHHHHHHHH----HTTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CChhhcccccCcEEEEecchhccCCccceEEEEEe---CHHHHHHHHHHH----hhccCCCCcHHHHHHHHHHhhccccc
Confidence 22223322346899999999999999999999744 777666654422 222335667777777666653100 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCH------------------HHHHHhhhcC
Q 015283 314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK------------------AQSDNMTNKW 375 (410)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~ll~~~ 375 (410)
..+.+++++.+++++++++++.+.|+ +.| +.+..+.+++|+|+.+.. +++..+++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 374 (422)
T 3fvs_A 300 RQPSSYFVQFPQAMQRCRDHMIRSLQ-SVG----LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNK 374 (422)
T ss_dssp TCTTCHHHHHHHHHHHHHHHHHHHHH-TTT----CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH-HcC----CeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhc
Confidence 00123457888999999999999999 876 466778899999986521 4567778778
Q ss_pred cEEEcCC-------------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 376 HVYMTKD-------------G--RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 376 gi~v~~~-------------g--Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
||.+.|| + ||+++. +++++++++++|++++++
T Consensus 375 gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 375 GLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp CEECEEGGGGSCHHHHTTSCSEEEEECCC-CHHHHHHHHHHHHHHHHC
T ss_pred CEEEeCcHHhcCCcCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence 9998873 2 999987 999999999999999875
No 18
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=4.6e-43 Score=334.91 Aligned_cols=367 Identities=17% Similarity=0.173 Sum_probs=283.3
Q ss_pred cccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283 9 RFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
.++++...+++.+..+.+.+.+. +++|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++..|..++|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~ 74 (389)
T 1gd9_A 3 LSDRLELVSASEIRKLFDIAAGM--KDVISLGIGEP----DFD-TPQHIKEYAKEALDKGL-THYGPNIGLLELREAIAE 74 (389)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHTC--SSCEECCCCSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHH
T ss_pred hhhHhHhCChhHHHHHHHHHhhh--cCeEecCCCCC----CCC-CCHHHHHHHHHHHhCCC-CCCCCCCCcHHHHHHHHH
Confidence 34455666777777766666544 57899999986 222 36889998888775543 578877899999999999
Q ss_pred HhcCCCCCcccCCc-eEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283 89 LLFGADNSVLKEQR-VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 167 (410)
Q Consensus 89 ~~~~~~~~~~~~~~-i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 167 (410)
++...+|..+++++ +++ ++||++++.++.. ..+.+||+|++++|+|.++...++..|.+++.+++.+++++.+|+
T Consensus 75 ~~~~~~g~~~~~~~~v~~--~~g~~~a~~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 150 (389)
T 1gd9_A 75 KLKKQNGIEADPKTEIMV--LLGANQAFLMGLS--AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNV 150 (389)
T ss_dssp HHHHHHCCCCCTTTSEEE--ESSTTHHHHHHHT--TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCH
T ss_pred HHHHHhCCCCCCCCeEEE--cCChHHHHHHHHH--HhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCH
Confidence 98665565566788 999 9999999999843 336699999999999999999999999999999885434577899
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+.+++.+++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+.+. ...++..+....+++
T Consensus 151 ~~l~~~l~~---~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~ 225 (389)
T 1gd9_A 151 DELKKYVTD---KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDA--RHYSIASLDGMFERT 225 (389)
T ss_dssp HHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTCGGGE
T ss_pred HHHHHhcCc---CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CCCCHhhccCCCCCE
Confidence 999999875 567777799999999999999999999999999999999999999886421 011222221123579
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
++++|+||.+|++|+|+||+++ ++++++++... ......+++..++.++...|++... .+++++.++++
T Consensus 226 i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~ 294 (389)
T 1gd9_A 226 ITVNGFSKTFAMTGWRLGFVAA---PSWIIERMVKF----QMYNATCPVTFIQYAAAKALKDERS----WKAVEEMRKEY 294 (389)
T ss_dssp EEEEESTTTTTCGGGCCEEEEC---CHHHHHHHHHH----HTTTTCSCCHHHHHHHHHHHTCHHH----HHHHHHHHHHH
T ss_pred EEEecChhhcCCcccceEEEEE---CHHHHHHHHHH----HhhhccCCCHHHHHHHHHHHhCCCc----chHHHHHHHHH
Confidence 9999999999999999999854 67766655442 2223345677788888778876421 12567888999
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCC
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLS 391 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~ 391 (410)
+++++++.+.|+ ++| +.+..+.+++|+|+.+ +. ++...+++++||.+.|+ + ||+++. +
T Consensus 295 ~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~ 368 (389)
T 1gd9_A 295 DRRRKLVWKRLN-EMG----LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-A 368 (389)
T ss_dssp HHHHHHHHHHHH-HTT----CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-C
T ss_pred HHHHHHHHHHHH-HcC----CeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-C
Confidence 999999999998 776 4666677888888754 33 44666664679999875 2 999987 9
Q ss_pred cccHHHHHHHHHHHhhhc
Q 015283 392 LAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 392 ~~~i~~~~~~l~~~l~~~ 409 (410)
++++++++++|++++++.
T Consensus 369 ~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 369 YEKLEEAMDRMERVLKER 386 (389)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998764
No 19
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-43 Score=343.11 Aligned_cols=359 Identities=16% Similarity=0.126 Sum_probs=276.5
Q ss_pred CCCCCcccchhHhhhc------CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 16 APPDPILGVSEAFKAD------TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 16 ~~~~~~~~~~~~~~~~------~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
.+++.+..+.+..... .++++|||+.|.+ ..+ .++.+.+++.+++.......|++..|.+++|++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 107 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFF----SYS-PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKL 107 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSC----SSC-CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCC----CCC-CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHH
Confidence 4555454454444221 4467999999987 222 2688999988887542236798888999999999999
Q ss_pred hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC--------
Q 015283 90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-------- 161 (410)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-------- 161 (410)
+.+.++..+++++|++ |+||++++.+++. ..+.+||+|++++|+|..+...++..|.+++.+++.+++
T Consensus 108 l~~~~g~~~~~~~v~~--t~G~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 183 (447)
T 3b46_A 108 YSPIYNTELKAENVTV--TTGANEGILSCLM--GLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTR 183 (447)
T ss_dssp HTTTTTSCCCGGGEEE--ESHHHHHHHHHHH--HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBC
T ss_pred HHHhcCCCCChhhEEE--eCCHHHHHHHHHH--HHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCcccccccccc
Confidence 9887777777889999 9999999999843 347799999999999999999999999999999985432
Q ss_pred --CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 162 --TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 162 --~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
++.+|++.+++.+++ +++++++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++ ...++..
T Consensus 184 ~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~ 257 (447)
T 3b46_A 184 GEEWTIDFEQFEKAITS---KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD---SFTRIAT 257 (447)
T ss_dssp STTSEECHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS---CCCCGGG
T ss_pred ccCcccCHHHHHHhhcc---CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC---CCcCHHH
Confidence 578999999988864 67777788999999999999999999999999999999999999988653 1112222
Q ss_pred H-hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283 240 F-ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 318 (410)
Q Consensus 240 ~-~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~ 318 (410)
+ .+..++++++.|+||.++++|+|+||+ ++.++++++.+..... ....+++...|.++...|++.. ..+
T Consensus 258 ~~~~~~~~~i~i~S~sK~~~~~G~riG~~--~~~~~~l~~~l~~~~~----~~~~~~~~~~~~a~~~aL~~~~----~~~ 327 (447)
T 3b46_A 258 LSPEIGQLTLTVGSAGKSFAATGWRIGWV--LSLNAELLSYAAKAHT----RICFASPSPLQEACANSINDAL----KIG 327 (447)
T ss_dssp SCHHHHTTEEEEEEHHHHTTCTTSCCEEE--ECSCHHHHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHHH----HHT
T ss_pred cCCCCCCcEEEEecCchhcCCcchhhEEE--EeCCHHHHHHHHHHHh----hccCCCChHHHHHHHHHHhCCc----chH
Confidence 2 123358999999999999999999997 4436776666554322 1223466777777766665431 134
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-------------------H-HHHHHhhhcCcEE
Q 015283 319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-------------------K-AQSDNMTNKWHVY 378 (410)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~ll~~~gi~ 378 (410)
++++.+++++++++++.+.|+ ++| +.+..+.+++|+|+.+. . +++.++++++||.
T Consensus 328 ~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~ 402 (447)
T 3b46_A 328 YFEKMRQEYINKFKIFTSIFD-ELG----LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVV 402 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHT----CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HCC----CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEE
Confidence 467889999999999999999 887 46667888999887542 1 4566777668999
Q ss_pred EcCC-------------C--eEEecCCCcccHHHHHHHHHHH
Q 015283 379 MTKD-------------G--RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 379 v~~~-------------g--Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
+.|+ + ||+++. +++++++++++|++.
T Consensus 403 v~pg~~f~~~~~~~~~~~~iRls~~~-~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 403 AIPPTEFYIKEHEKAAENLLRFAVCK-DDAYLENAVERLKLL 443 (447)
T ss_dssp CBCGGGGSCGGGGGGGTTEEEEECCS-CHHHHHHHHHHGGGG
T ss_pred EECchHhCCCCccCCCCCEEEEEEeC-CHHHHHHHHHHHHHH
Confidence 9874 2 999987 899999999999874
No 20
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=4.4e-43 Score=335.35 Aligned_cols=356 Identities=18% Similarity=0.149 Sum_probs=272.9
Q ss_pred CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
+++..+++++..+.....+ ..++++|||+.|.+ ..+ +++.+.+++.+.+.... ..|++..|..++|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~ 80 (391)
T 3h14_A 7 SRSAVDPFIVMDVMEAARRAEEAGRRIIHMEVGQP----GTG-APRGAVEALAKSLETDA-LGYTVALGLPALRQRIARL 80 (391)
T ss_dssp STTCCCCCTTHHHHHHHHHHHHTTCCCEECCCSSC----SSC-SCHHHHHHHHHHHC-----------CCHHHHHHHHHH
T ss_pred hHhhcCcchHHHHHHHHHHHHhcCCCeEEccCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHHH
Confidence 7777777777666554433 23468999999987 333 37889999988876544 7798888999999999999
Q ss_pred hcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhh
Q 015283 90 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 169 (410)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 169 (410)
+.+.++..+++++|++ |+||++++.+++. ..+.+||+|+++.|+|..+...++..|.+++.+++.++.++.+|++.
T Consensus 81 ~~~~~g~~~~~~~v~~--t~g~~~al~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 156 (391)
T 3h14_A 81 YGEWYGVDLDPGRVVI--TPGSSGGFLLAFT--ALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPAD 156 (391)
T ss_dssp HHHHHCCCCCGGGEEE--ESSHHHHHHHHHH--HHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHH
T ss_pred HHHHhCCCCCHHHEEE--ecChHHHHHHHHH--HhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence 9877777777899999 9999999999843 34679999999999999999999999999999998655567789988
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+++. +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ... ....+++++
T Consensus 157 l~~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~---~~~---~~~~~~~i~ 224 (391)
T 3h14_A 157 FAGL------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKA---VTA---LELTDECYV 224 (391)
T ss_dssp HTTS------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC---CCG---GGTCSSSEE
T ss_pred HHhc------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCC---cCh---hhcCCCEEE
Confidence 8765 3445566899999999999999999999999999999999999998865321 111 223568999
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
++|+||.+|++|+|+||+++ ++++++.+..... ....+++.+++.++...|... +++++.++++++
T Consensus 225 ~~s~sK~~g~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~ 290 (391)
T 3h14_A 225 INSFSKYFSMTGWRVGWMVV---PEDQVRVVERIAQ----NMFICAPHASQVAALAALDCD-------AELQANLDVYKA 290 (391)
T ss_dssp EEESSSTTCCTTSCCEEEEC---CGGGHHHHHHHHH----HTTCCCCHHHHHHHHHHTTCH-------HHHHHHHHHHHH
T ss_pred EEechhccCCccceeEEEEe---CHHHHHHHHHHHh----hhccCCCHHHHHHHHHHhCCh-------HHHHHHHHHHHH
Confidence 99999999999999999754 7776666554332 233467777777776777632 345788899999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC---------C--eEEecCCCc
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD---------G--RISLAGLSL 392 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~---------g--Ris~~~~~~ 392 (410)
+++.+.+.|+ +.+. .....+.+++|+|+.+ +. ++..++++++||.+.|| + ||+++. ++
T Consensus 291 ~~~~l~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~ 365 (391)
T 3h14_A 291 NRKLMLERLP-KAGF---TRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-AT 365 (391)
T ss_dssp HHHHHHHHHH-HHTC---CCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CH
T ss_pred HHHHHHHHHH-HcCC---CcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CH
Confidence 9999999998 8863 2335677788888643 33 45677777679999874 1 999987 89
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
+++++++++|++++++
T Consensus 366 ~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 366 ADIEEGLDRLEAFMQA 381 (391)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999875
No 21
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=7.8e-43 Score=333.24 Aligned_cols=369 Identities=16% Similarity=0.146 Sum_probs=282.0
Q ss_pred ccccCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283 8 SRFEGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a 85 (410)
+.+.+++..+++++..+...+.+. .++++|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++..|..++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~ 75 (388)
T 1j32_A 2 KLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEP----DFN-TPKHIVEAAKAALEQGK-TRYGPAAGEPRLREA 75 (388)
T ss_dssp CCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred chhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence 334456667777777777655542 2357899999987 222 36888888888775443 679888899999999
Q ss_pred HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283 86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 165 (410)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (410)
+++++...++..+++++|++ ++||++++.++... .+.+||+|++++|+|..+...++..|.+++.+++.+++++.+
T Consensus 76 la~~~~~~~g~~~~~~~v~~--~~g~~~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 151 (388)
T 1j32_A 76 IAQKLQRDNGLCYGADNILV--TNGGKQSIFNLMLA--MIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKV 151 (388)
T ss_dssp HHHHHHHHHCCCCCGGGEEE--ESHHHHHHHHHHHH--HCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCC
T ss_pred HHHHHHHhcCCCCChhhEEE--cCCHHHHHHHHHHH--hcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCC
Confidence 99998766666666889999 99999999998443 367999999999999999999999999999998854446788
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cC
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RG 244 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~ 244 (410)
|++.+++.+++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++.. ..++..+.. ..
T Consensus 152 d~~~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~ 226 (388)
T 1j32_A 152 SPEQIRQAITP---KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQ--HLSIGAASPEAY 226 (388)
T ss_dssp CHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCHHHH
T ss_pred CHHHHHHhcCc---CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCC--CCCHHHcccccc
Confidence 99999999874 6777778999999999999999999999999999999999999998864211 111111111 13
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 324 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 324 (410)
++++++.|+||.+|++|+|+||+++ ++++++.+... ......+++.+++.++...|+.. .+++++.+
T Consensus 227 ~~~~~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~ 293 (388)
T 1j32_A 227 ERSVVCSGFAKTYAMTGWRVGFLAG---PVPLVKAATKI----QGHSTSNVCTFAQYGAIAAYENS------QDCVQEML 293 (388)
T ss_dssp HTEEEEEESTTTTTCTTTCCEEEEC---CHHHHHHHHHH----HHTTTCSCCHHHHHHHHHHHHSC------SHHHHHHH
T ss_pred CCEEEEeechhccCCcccceEEEEe---CHHHHHHHHHH----HhhcccCCCHHHHHHHHHHHhCC------cHHHHHHH
Confidence 4789999999999999999999854 77766655443 22233456777777776666532 12346788
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC------C--eEEecCC
Q 015283 325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD------G--RISLAGL 390 (410)
Q Consensus 325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~ 390 (410)
++++++++++.+.|+ +++. +.+..+.+++|.|+.+ +. ++...+++++||.+.|+ + ||+++.
T Consensus 294 ~~~~~~~~~l~~~L~-~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~- 368 (388)
T 1j32_A 294 AAFAERRRYMLDALN-AMPG---LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT- 368 (388)
T ss_dssp HHHHHHHHHHHHHHH-TCTT---CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS-
T ss_pred HHHHHHHHHHHHHHh-hCCC---CcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecC-
Confidence 889999999999998 7721 4666777888888744 33 34566766569999875 2 999985
Q ss_pred CcccHHHHHHHHHHHhhhc
Q 015283 391 SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++++|+++++++
T Consensus 369 ~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 369 DLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 22
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.6e-43 Score=338.31 Aligned_cols=376 Identities=13% Similarity=0.126 Sum_probs=266.5
Q ss_pred CccceecccccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcc
Q 015283 1 MVAAVNVSRFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEG 78 (410)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g 78 (410)
|...+-|..+.++...+++.+..+.....+ ..+.++|||+.|.+ ..+ .++.+.+++.+.+.......|++..|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g 76 (412)
T 2x5d_A 2 MAESRPARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNP----DGP-TPPHIVEKLCTVAQREDTHGYSTSRG 76 (412)
T ss_dssp -------------------CHHHHHHHHHHHHHTTCCCEECSSCCC----CSC-CCHHHHHHHHHTC---------CTTC
T ss_pred CccccccchhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 455667777777777777766554443331 22457899999986 222 36899999988875532367887889
Q ss_pred cHHHHHHHHHHhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 79 LAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
..++|+++++++...+|..+++ ++|++ ++||++++.+++.. .+.+||+|+++.|+|..+...++..|.+++.+++
T Consensus 77 ~~~l~~~ia~~~~~~~g~~~~~~~~v~~--t~g~~~a~~~~~~~--~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T 2x5d_A 77 IPRLRRAISHWYRDRYDVQIDPESEAIV--TIGSKEGLAHLMLA--TLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPL 152 (412)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEE--ESCHHHHHHHHHHH--HCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCcCEEE--cCChHHHHHHHHHH--hCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeec
Confidence 9999999999986655655566 69999 99999999998443 3679999999999999999999999999999988
Q ss_pred ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh
Q 015283 158 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 237 (410)
Q Consensus 158 ~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 237 (410)
.+++++.+|++.+++.+.. +++++++++|+||||.++|.+++++|+++|++||+++|+||+|..+.+.+. ...++
T Consensus 153 ~~~~~~~~d~~~l~~~i~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~ 227 (412)
T 2x5d_A 153 VPGIDFFNELERAIRESIP---KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGW--KAPSI 227 (412)
T ss_dssp STTSCHHHHHHHHHHTEES---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCG
T ss_pred CCccCCCCCHHHHHHhccc---CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCh
Confidence 5433566889999988864 455666689999999999999999999999999999999999999886321 11122
Q ss_pred HHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283 238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK 317 (410)
Q Consensus 238 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~ 317 (410)
..+....+++++++|+||.+|++|+|+||+++ ++++++.+..... ....+++.+++.++...|++..
T Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~~------ 294 (412)
T 2x5d_A 228 MQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVG---NPELVSALARIKS----YHDYGTFTPLQVAAIAALEGDQ------ 294 (412)
T ss_dssp GGSTTGGGTEEEEEECC-CCSCTTSCCEEEEE---CHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHSCS------
T ss_pred hhccCccCcEEEEecCccccCCcccceEEEEc---CHHHHHHHHHHHh----hhccCCCHHHHHHHHHHHhCCH------
Confidence 22211235899999999999999999999865 7887666654322 1223566777777777776531
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------CH-HHHHHhhhcCcEEEcCC-------
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NK-AQSDNMTNKWHVYMTKD------- 382 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~ll~~~gi~v~~~------- 382 (410)
+++++.+++++++++++.+.|+ +.+ +.+..+.+++|+|+.+ +. ++...+++++||.+.|+
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~ 369 (412)
T 2x5d_A 295 QCVRDIARQYQQRRDVLVKGLR-EAG----WMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYG 369 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHT----CCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HCC----CEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCC
Confidence 2356788899999999999998 776 4666777888888754 23 34666766679999875
Q ss_pred -C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 383 -G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 383 -g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ ||+++. +++++++++++|++++++.
T Consensus 370 ~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 370 DDHVRFALIE-NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp TTEEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 2 999987 8999999999999998653
No 23
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2.2e-43 Score=339.52 Aligned_cols=366 Identities=13% Similarity=0.069 Sum_probs=281.2
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 89 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~ 89 (410)
++++...+++.+..+.+. ..++++|+|+.|.+ ..+ .++.+.+++.+.+.......|++..|..++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~---~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~ 73 (410)
T 3e2y_A 2 AKRIEGLDSNVWVEFTKL---AADPSVVNLGQGFP----DIS-PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCL 73 (410)
T ss_dssp CGGGTTCCCCHHHHTTTT---TTSTTSEECSSCCC----CSC-CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHH
T ss_pred chhhccCCccHHHHHHHH---hcCCCeEEecCCCC----CCC-CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHH
Confidence 345666777765554432 23467999999987 433 3799999998887654346798888999999999999
Q ss_pred hcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec---------
Q 015283 90 LFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD--------- 159 (410)
Q Consensus 90 ~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--------- 159 (410)
+...++..+++ ++|++ ++||++++..++. ..+.+||+|+++.|+|..+...++..|.+++.+++..
T Consensus 74 ~~~~~~~~~~~~~~i~~--~~g~~~a~~~~~~--~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~ 149 (410)
T 3e2y_A 74 YGKIYQRQIDPNEEILV--AVGAYGSLFNSIQ--GLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWT 149 (410)
T ss_dssp HHHHHTSCCCTTTSEEE--ESHHHHHHHHHHH--HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCB
T ss_pred HHHHhCCCCCCCCCEEE--eCCcHHHHHHHHH--HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecccccccccccc
Confidence 98767777777 79999 9999999999843 3367999999999999999999999999999998752
Q ss_pred CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH
Q 015283 160 PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 239 (410)
Q Consensus 160 ~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 239 (410)
..++.+|++.+++.+++ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+. ...++..
T Consensus 150 ~~~~~~d~~~l~~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~ 224 (410)
T 3e2y_A 150 SSDWTFDPRELESKFSS---KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH--THVKIAT 224 (410)
T ss_dssp GGGEECCHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGG
T ss_pred ccCCcCCHHHHHhhcCC---CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC--CCCCHHH
Confidence 24567899999988864 677778899999999999999999999999999999999999999886532 1222323
Q ss_pred HhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh-hhHHHHHH
Q 015283 240 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP-ALFDEWKA 318 (410)
Q Consensus 240 ~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~-~~~~~~~~ 318 (410)
+....++++++.|+||.+|++|+|+||+++ ++++++.+... ......+++..++.++...|.+. .....+.+
T Consensus 225 ~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 297 (410)
T 3e2y_A 225 LPGMWERTITIGSAGKTFSVTGWKLGWSIG---PAHLIKHLQTV----QQNSFYTCATPLQAALAEAFWIDIKRMDDPEC 297 (410)
T ss_dssp STTCGGGEEEEEEHHHHSSCGGGCCEEEEC---CHHHHHHHHHH----HHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred cCCccCeEEEEecchhhcCCCCceEEEEEE---CHHHHHHHHHH----HHhhccCCChHHHHHHHHHHHhhhccccchHH
Confidence 333346899999999999999999999754 77766665433 22233456777777776666520 00000123
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----------------HHHHHHhhhcCcEEEcCC
Q 015283 319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------------KAQSDNMTNKWHVYMTKD 382 (410)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ll~~~gi~v~~~ 382 (410)
++++.+++++++++++.+.|+ ++| +.+..+.+++|+|+.+. .+++.++++++||.+.||
T Consensus 298 ~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 372 (410)
T 3e2y_A 298 YFNSLPKELEVKRDRMVRLLN-SVG----LKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPV 372 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTT----CEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HCC----CeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCc
Confidence 457888999999999999999 876 46677889999887441 156777887789999774
Q ss_pred -------------C--eEEecCCCcccHHHHHHHHHHH
Q 015283 383 -------------G--RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 383 -------------g--Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
+ ||+++. +++++++++++|+++
T Consensus 373 ~~f~~~~~~~~~~~~iRis~~~-~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 373 SAFCDSKSKPHFEKLVRFCFIK-KDSTLDAAEEIFRAW 409 (410)
T ss_dssp GGGSCTTTHHHHTTEEEEECCC-CHHHHHHHHHHHHTC
T ss_pred hhhCCCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHhc
Confidence 2 999987 999999999999763
No 24
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=2.7e-42 Score=330.34 Aligned_cols=354 Identities=15% Similarity=0.141 Sum_probs=276.1
Q ss_pred CCCCCCcccchhHhhh---cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc
Q 015283 15 MAPPDPILGVSEAFKA---DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF 91 (410)
Q Consensus 15 ~~~~~~~~~~~~~~~~---~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~ 91 (410)
..++.++..+.+.... +.++++|||+.|.+ ..+ .++.+.+++.+.+.. ...|++..|..++|+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~ 80 (396)
T 3jtx_A 8 QLKPYPFARLHEAMQGISAPEGMEAVPLHIGEP----KHP-TPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLK 80 (396)
T ss_dssp HCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSC----CSC-CCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHhhhhccCCCeEEeCCcCC----CCC-CCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHH
Confidence 3445555454443333 33568999999987 333 378999999887753 3779888899999999999997
Q ss_pred CCCCCc-ccCC-ceEEEecCChhhHHHHHHHHHHHhCCC-----CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcc
Q 015283 92 GADNSV-LKEQ-RVATVQGLSGTGSLRLAAALIERYFPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 164 (410)
Q Consensus 92 ~~~~~~-~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 164 (410)
+.++.. ++++ +|++ |+|+++++.+++. ..+.+| |+|+++.|+|..+...++..|.+++.+++ +++++.
T Consensus 81 ~~~g~~~~~~~~~i~~--t~g~~~al~~~~~--~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~ 155 (396)
T 3jtx_A 81 RRYDGLTVDADNEILP--VLGSREALFSFVQ--TVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFN 155 (396)
T ss_dssp HHTTTCCCCTTTSEEE--ESSHHHHHHHHHH--HHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCC
T ss_pred HhcCCCCCCCCCeEEE--cCCcHHHHHHHHH--HHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCc
Confidence 777766 6688 9999 9999999999843 336686 79999999999999999999999999998 566778
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHH-H---
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL-F--- 240 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~--- 240 (410)
+|++.+++.+.+ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+. ...+... .
T Consensus 156 ~d~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~ 230 (396)
T 3jtx_A 156 PDWRSISEEVWK---RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN--KPLGCLQAAAQL 230 (396)
T ss_dssp CCGGGSCHHHHH---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC--CCCCHHHHHHHT
T ss_pred cCHHHHHHhhcc---CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCchHHhhhhhc
Confidence 899999999886 677777789999999999999999999999999999999999999886531 1111111 1
Q ss_pred hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 320 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 320 (410)
....++++++.|+||.++++|+|+||++. ++++++.+..... ....+++..++.++...|++. +++
T Consensus 231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~-------~~~ 296 (396)
T 3jtx_A 231 GRSRQKLLMFTSLSKRSNVPGLRSGFVAG---DAELLKNFLLYRT----YHGSAMSIPVQRASIAAWDDE-------QHV 296 (396)
T ss_dssp TCCCTTEEEEEESTTTSSCGGGCCEEEEE---CHHHHHHHHHHHH----HHTCCCCHHHHHHHHHHHHCC-------HHH
T ss_pred ccccCcEEEEeccccccCCcccceEEEEe---CHHHHHHHHHHHh----hcccCCCHHHHHHHHHHhCCH-------HHH
Confidence 11357899999999999999999999754 8887666654322 223356777778777777653 235
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC----HHHHHHhhhcCcEEEcCC--------------
Q 015283 321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKD-------------- 382 (410)
Q Consensus 321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~-------------- 382 (410)
++.+++++++++.+.+.|+ +.. .+..+.+++|+|+.+. .+++.++++++||.+.||
T Consensus 297 ~~~~~~~~~~~~~l~~~l~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~ 370 (396)
T 3jtx_A 297 IDNRRLYQEKFERVIPILQ-QVF-----DVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGE 370 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TTS-----CCCCCSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHH-hcC-----CccCCCeeEEEEEECCCCCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCC
Confidence 6888899999999999998 652 4456778999988653 455777777779999763
Q ss_pred C--eEEecCCCcccHHHHHHHHHHHh
Q 015283 383 G--RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 383 g--Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
+ ||+++. +++++++++++|++++
T Consensus 371 ~~iRis~~~-~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 371 GYVRIALVA-DVATCVKAAEDIVSLY 395 (396)
T ss_dssp TEEEEECCS-CHHHHHHHHHHHHHHC
T ss_pred CeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 2 999987 9999999999999876
No 25
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=5.3e-43 Score=335.55 Aligned_cols=365 Identities=17% Similarity=0.189 Sum_probs=275.7
Q ss_pred cccccCCCCC--CCCCcccchhHhh---hc-CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---CccCcCCc
Q 015283 7 VSRFEGVTMA--PPDPILGVSEAFK---AD-TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIE 77 (410)
Q Consensus 7 ~~~~~~~~~~--~~~~~~~~~~~~~---~~-~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~ 77 (410)
|+.++++... .++.+.++..... .. .++++|||+.|.+ ..+ .++.+.+++.+.+.... ...|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~~y~~~~ 76 (398)
T 3ele_A 2 MVVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNP----SIP-APQIVNDTIKELVTDYDSVALHGYTSAQ 76 (398)
T ss_dssp CSSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCC----CSC-CCHHHHHHHHHHHHHSCHHHHHSCCCTT
T ss_pred cchhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCC----CCC-CCHHHHHHHHHHHhcCCccccCCcCCCC
Confidence 4445555554 3555555433322 21 2257899999976 322 36889999888775421 26798889
Q ss_pred ccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283 78 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYR 156 (410)
Q Consensus 78 g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 156 (410)
|..++|+++++++.+.++..+++++|++ |+||++++..++.. .+.+| |+|++++|+|..+...++..|.+++.++
T Consensus 77 g~~~lr~~la~~l~~~~g~~~~~~~i~~--~~g~~~al~~~~~~--l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~ 152 (398)
T 3ele_A 77 GDVETRAAIAEFLNNTHGTHFNADNLYM--TMGAAASLSICFRA--LTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVP 152 (398)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESSHHHHHHHHHHH--HCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEEC
T ss_pred CcHHHHHHHHHHHHHHhCCCCChHHEEE--ccCHHHHHHHHHHH--HcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEe
Confidence 9999999999999877777777899999 99999999998443 37799 9999999999999999999999999999
Q ss_pred eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH------cCCcccccccCCCCCCCCC
Q 015283 157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~------~~~~li~Deay~~~~~~~~ 230 (410)
+. .+++.+|++++++.+++ +++++++++|+||||.+++.+++++|+++|++ ||+++|+||+|.++.+++.
T Consensus 153 ~~-~~~~~~d~~~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~ 228 (398)
T 3ele_A 153 AD-TEHFQIDFDALEERINA---HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGI 228 (398)
T ss_dssp CC-TTTSSCCHHHHHHTCCT---TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTC
T ss_pred cC-CcCCcCCHHHHHHHhCc---CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCC
Confidence 84 34678999999998865 67788889999999999999999999999999 9999999999999886531
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHH--HHHHHHHhhccC-cccCCChhHHHHHHHHh
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA--RVKSQLKRLARP-MYSNPPVHGARIVANVV 307 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~a~~~l 307 (410)
.. + ......+++++++|+||.+|++|+|+||+++ ++++.+ .+...+...... .+.+++.+++.++...+
T Consensus 229 ~~---~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 300 (398)
T 3ele_A 229 KV---P--FVTKYYDNTLVCYSYSKSLSLPGERIGYVLV---PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQ 300 (398)
T ss_dssp CC---C--CGGGTCSSEEEEEESTTTSSCTTTCCEEEEC---CTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCT
T ss_pred Cc---C--ChHhhcCCeEEEEehhhcCCCccceeEEEEE---cchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHh
Confidence 11 1 1223456899999999999999999999843 444322 233333222222 23466777777777777
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC-
Q 015283 308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG- 383 (410)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g- 383 (410)
++.. .+++++++++++.+.|+ +++ +.+..+.+++|+|+.+ +.+.+.+.+.++||.+.||.
T Consensus 301 ~~~~-----------~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~ 364 (398)
T 3ele_A 301 GATG-----------DINAYKENRDLLYEGLT-RIG----YHCFKPDGAFYMFVKALEDDSNAFCEKAKEEDVLIVAADG 364 (398)
T ss_dssp TCCC-----------CHHHHHHHHHHHHHHHH-HHT----CCEECCSBSSEEEEECSSSCHHHHHHHHHTTTEECEESGG
T ss_pred cCHH-----------HHHHHHHHHHHHHHHHH-HcC----CeecCCCeeEEEEEEcCCCCHHHHHHHHHHCCEEEeCccc
Confidence 6542 34677888899999998 876 4667788898888865 34444444556799998862
Q ss_pred -------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 384 -------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 -------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++. +++++++++++|+++++++
T Consensus 365 ~~~~~~iRis~~~-~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 365 FGCPGWVRISYCV-DREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp GTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 999975 9999999999999998764
No 26
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=334.19 Aligned_cols=339 Identities=17% Similarity=0.185 Sum_probs=259.7
Q ss_pred HHHHHHHHHhhcc---CCCccCcCCcccHHHHHHHHHHhcCCC-CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC-
Q 015283 55 DVVKKAENLMLER---GENKEYLPIEGLAAFNKVTAELLFGAD-NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA- 129 (410)
Q Consensus 55 ~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~aia~~~~~~~-~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd- 129 (410)
..+.+++.+++.. .....|++..|.+++|+++++++.+.+ |.++++++|++ |+|+++++.+++.+ .+.+||
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~--t~G~~~ai~~~~~~--l~~~gd~ 179 (498)
T 3ihj_A 104 EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYL--TTGASDGISTILKI--LVSGGGK 179 (498)
T ss_dssp HHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEE--ESSHHHHHHHHHHH--HCCCCGG
T ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEE--cCCHHHHHHHHHHH--HcCCCCC
Confidence 3444444555432 123679999999999999999998777 47778899999 99999999998443 366765
Q ss_pred ---EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC--CcEEEEeCCCCCCCCCCCCHHHHHH
Q 015283 130 ---KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG--GSFILLHGCAHNPTGIDPTPEQWEK 204 (410)
Q Consensus 130 ---~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~--~~~~ii~~~p~NPtG~~~~~~~l~~ 204 (410)
.|+++.|+|+.|...++..|++++.+++.++++|.+|++++++.+++.+. +++++++++|+||||.++|.+++++
T Consensus 180 ~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~ 259 (498)
T 3ihj_A 180 SRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIED 259 (498)
T ss_dssp GSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHH
Confidence 99999999999999999999999999997667889999999999876221 3677777899999999999999999
Q ss_pred HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-------cCCcEEEEecccccc-cccCCCcceEEEEeCCchh
Q 015283 205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDL 276 (410)
Q Consensus 205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~ 276 (410)
|+++|++||++||+||+|..+.+++. ....++..+.. ...++++++||||.+ |++|+|+||++++..++++
T Consensus 260 i~~la~~~~~~li~De~y~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l 338 (498)
T 3ihj_A 260 VIHFAWEEKLFLLADEVYQDNVYSPD-CRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEI 338 (498)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCCTT-CCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHH
T ss_pred HHHHHHHcCcEEEEEcCccccccCCC-CCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHH
Confidence 99999999999999999999987531 12223333322 123589999999999 8899999998644468887
Q ss_pred HHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 277 AARVKSQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++.+..... .+.+++..+|.++..++++. .....|.++..+.+++++++++++.+.|. +++ + +.+..
T Consensus 339 ~~~l~~~~~-----~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~~--g-~~~~~ 409 (498)
T 3ihj_A 339 KGQLVKLLS-----VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFN-QVP--G-IHCNP 409 (498)
T ss_dssp HHHHHHHHH-----HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH-TST--T-EECCC
T ss_pred HHHHHHHHh-----ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC--C-cEecC
Confidence 776655422 34567788888888888741 23344566677888999999999999998 772 1 67888
Q ss_pred CCcceeeecCC---------------CHHH--HHHhhhcCcEEEcCC-------C----eEEecCCCcccHHHHHHHHHH
Q 015283 353 RQIGMFSFTGL---------------NKAQ--SDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 353 ~~~~~~~~~~~---------------~~~~--~~~ll~~~gi~v~~~-------g----Ris~~~~~~~~i~~~~~~l~~ 404 (410)
+++++|.|+.+ +.+. +.++++++||.+.|| + |++++. +++++++++++|++
T Consensus 410 p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~-~~e~l~~~i~~L~~ 488 (498)
T 3ihj_A 410 LQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILP-PVEKLKTVLQKVKD 488 (498)
T ss_dssp CCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCS-CHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCC-CHHHHHHHHHHHHH
Confidence 99999999632 2332 577787789999885 1 999964 89999999999999
Q ss_pred Hhhh
Q 015283 405 SYHN 408 (410)
Q Consensus 405 ~l~~ 408 (410)
++++
T Consensus 489 ~~~~ 492 (498)
T 3ihj_A 489 FHIN 492 (498)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8865
No 27
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.7e-42 Score=332.57 Aligned_cols=363 Identities=15% Similarity=0.099 Sum_probs=273.3
Q ss_pred CCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc
Q 015283 12 GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF 91 (410)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~ 91 (410)
+++..+++.+..+.......++.++|||+.|.+ ..+ .++.+.+++.+.+.......|++..|..++|+++++++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 99 (404)
T 2o1b_A 25 KLANIPDSYFGKTMGRKIEHGPLPLINMAVGIP----DGP-TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQ 99 (404)
T ss_dssp HHHTSCCCTTC-------CCCSSCCEECCCCSC----SSC-CCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred HhhhCCchHHHHHHHHHHhcCCCCEEecCCcCC----CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 344455555555444333333456899999987 222 268899998887744222568777899999999999986
Q ss_pred CCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH
Q 015283 92 GADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM 170 (410)
Q Consensus 92 ~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 170 (410)
+.++.++++ ++|++ ++|+++++.+++.. .+.+||+|++++|+|.++...++..|.+++.+++.+ +++.+|++.+
T Consensus 100 ~~~g~~~~~~~~v~~--t~G~~~al~~~~~~--l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l 174 (404)
T 2o1b_A 100 RQYNVTLDKEDEVCI--LYGTKNGLVAVPTC--VINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKV 174 (404)
T ss_dssp HHHCCCCCTTTSEEE--ESSHHHHHHHHHHH--HCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGS
T ss_pred HHhCCCCCCcccEEE--cCCcHHHHHHHHHH--hcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHH
Confidence 655665555 78999 99999999998443 367999999999999999999999999999998843 4667899999
Q ss_pred HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
++.+.. +++++++++|+||||.++|.+++++|+++|+++|++||+||+|..+.+++. ..++..+....++++++
T Consensus 175 ~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~~~~~~i~~ 248 (404)
T 2o1b_A 175 DSQIID---KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK---NPSILASENGKDVAIEI 248 (404)
T ss_dssp CHHHHH---HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC---CCCGGGSTTHHHHEEEE
T ss_pred HHhhcc---CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCCCCCCEEEE
Confidence 988864 567777789999999999999999999999999999999999999876421 11111111122478999
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
+|+||.+|++|+|+||+++ ++++++++..... ....+++..++.++...|++. .+++++.+++++++
T Consensus 249 ~s~sK~~g~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~ 315 (404)
T 2o1b_A 249 YSLSKGYNMSGFRVGFAVG---NKDMIQALKKYQT----HTNAGMFGALQDAAIYALNHY------DDFLEEQSNVFKTR 315 (404)
T ss_dssp EESTTTTTCGGGCCEEEEE---CHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHH
T ss_pred EecchhccCchhheEeEec---CHHHHHHHHHHHh----hccCCCCHHHHHHHHHHHhcC------HHHHHHHHHHHHHH
Confidence 9999999999999999855 7887666654322 122356777777777666542 23457888899999
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKC 395 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i 395 (410)
++++.+.|+ +.+ +.+..+.+++|+|+.+ + .++.+++++++||.+.|+ + ||+++. +++++
T Consensus 316 ~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l 389 (404)
T 2o1b_A 316 RDRFEAMLA-KAD----LPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKL 389 (404)
T ss_dssp HHHHHHHHH-HTT----CCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHH
T ss_pred HHHHHHHHH-hcC----CeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHH
Confidence 999999998 776 4666777888888754 2 345677776679999875 2 999987 89999
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
++++++|++++++.
T Consensus 390 ~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 390 DEAAIRLTELAYLY 403 (404)
T ss_dssp HHHHHHHHGGGGGG
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 28
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=5.6e-42 Score=332.94 Aligned_cols=360 Identities=13% Similarity=0.167 Sum_probs=273.7
Q ss_pred CCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcC
Q 015283 15 MAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFG 92 (410)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~ 92 (410)
...++++..+.+.. ..+++|+|+.|.| +...+| ++.+.+++.+.+... ....|++..|.+++|+++++++.+
T Consensus 60 ~~~~s~~~~~~~~~---~~~~~i~l~~g~p-~~~~~p--~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 133 (448)
T 3aow_A 60 EMRASEVRELLKLV---ETSDIISLAGGLP-NPKTFP--KEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGK 133 (448)
T ss_dssp HCCCCHHHHHHHHH---HTSSSEECCCCCC-CGGGSC--HHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHhc---cCCCcEeCCCCCC-CchhCC--HHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHH
Confidence 34445444433322 2457899999987 222222 578888887776442 125798888999999999999855
Q ss_pred CCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHH
Q 015283 93 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 93 ~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 172 (410)
.++.+ ++++|++ |+|+++++.+++..+ +.+||+|++++|+|.++...++..|++++.+++.+ + ++|++.+++
T Consensus 134 ~~g~~-~~~~v~~--t~G~~~al~~~~~~l--~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~--g~d~~~L~~ 205 (448)
T 3aow_A 134 RYGIS-QDNDIMI--TSGSQQALDLIGRVF--LNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDD-E--GMKVEILEE 205 (448)
T ss_dssp HHCCC-TTSEEEE--ESSHHHHHHHHHHHH--CCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET-T--EECHHHHHH
T ss_pred hcCcC-ChhhEEE--eCcHHHHHHHHHHHH--cCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCC-C--CCCHHHHHH
Confidence 55554 5789999 999999999985443 67999999999999999999999999999999843 2 489999999
Q ss_pred HHh----cCCCCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 173 DIK----AAPGGSFIL-LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 173 ~i~----~~~~~~~~i-i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
.++ +. .+++++ ++++|+||||.+++.+++++|+++|++||++||+||+|..+.+++.. ..++..+ +..+++
T Consensus 206 ~l~~~~~~~-~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~--~~~~~~~-~~~~~v 281 (448)
T 3aow_A 206 KLKELKSQG-KKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNP--EKKIKAL-DNEGRV 281 (448)
T ss_dssp HHHHHHHTT-CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCC--CCCTGGG-CTTSCE
T ss_pred HHhhhhccC-CCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC--CcCHHhc-CCCCCE
Confidence 887 31 245554 67999999999999999999999999999999999999998864211 1122122 234589
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
++++||||.++ +|+|+||+++ ++++++++..... ....+++.++|.++..+|++.. |.+++++.++.+
T Consensus 282 i~~~S~SK~~~-~GlriG~v~~---~~~l~~~l~~~~~----~~~~~~~~~~q~a~~~~L~~~~----~~~~~~~~~~~~ 349 (448)
T 3aow_A 282 IYLGTFSKILA-PGFRIGWMVG---DPGIIRKMEIAKQ----STDLCTNVFGQVVAWRYVDGGY----LEKHIPEIRKFY 349 (448)
T ss_dssp EEEEESTTTTC-GGGCCEEEEE---CHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHHTTH----HHHHHHHHHHHH
T ss_pred EEEccchhhcc-ccccEEEEEe---CHHHHHHHHHHHH----HhcCCCCHHHHHHHHHHHHhCC----HHHHHHHHHHHH
Confidence 99999999999 9999999865 7887766654332 1223567788888888887643 356678889999
Q ss_pred HHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCC----------C--eEEecC
Q 015283 328 KNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD----------G--RISLAG 389 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~----------g--Ris~~~ 389 (410)
+++++++.+.|+ +. + ..+.+..+.+|+|+|+.+ +. +++.+++++ ||.+.|| + ||+++.
T Consensus 350 ~~~~~~l~~~L~-~~~~--~g~~~~~p~~g~~~~v~~~~~~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~ 425 (448)
T 3aow_A 350 KPRRDAMLEALE-EFMP--EGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTY 425 (448)
T ss_dssp HHHHHHHHHHHH-HHCC--TTCEECCCSBSSEEEEECSTTCCHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSS
T ss_pred HHHHHHHHHHHH-HhCC--CCeEEeCCCccEEEEEEcCCCCCHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCC
Confidence 999999999998 64 2 014666788899999855 33 456777765 9999874 2 999987
Q ss_pred CCcccHHHHHHHHHHHhhh
Q 015283 390 LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 390 ~~~~~i~~~~~~l~~~l~~ 408 (410)
.+++++++++++|++++++
T Consensus 426 ~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 426 VDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp SCTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 6899999999999998865
No 29
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=7.9e-42 Score=326.42 Aligned_cols=358 Identities=17% Similarity=0.172 Sum_probs=278.8
Q ss_pred CCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHh
Q 015283 13 VTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 90 (410)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~ 90 (410)
+...+++.+.++...+.+. .++++|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++..|..++|+++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~~~ 91 (389)
T 1o4s_A 18 ISEIPISKTMELDAKAKALIKKGEDVINLTAGEP----DFP-TPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKRI 91 (389)
T ss_dssp HHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSC----SSC-CCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHHH
T ss_pred HhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHH
Confidence 3446667777766655543 3457899999987 222 26889999888875543 57877789999999999998
Q ss_pred cCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH
Q 015283 91 FGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM 170 (410)
Q Consensus 91 ~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 170 (410)
...+|.+++++++++ ++||++++..+...+ +.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++.+
T Consensus 92 ~~~~g~~~~~~~v~~--~~g~t~al~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 167 (389)
T 1o4s_A 92 GERYKKDISPDQVVV--TNGAKQALFNAFMAL--LDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEV 167 (389)
T ss_dssp HHHHTCCCCGGGEEE--ESHHHHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHH
T ss_pred HHHhCCCCCHHHEEE--ecCHHHHHHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHH
Confidence 765566566889999 999999999984433 6799999999999999999999999999999885434678899999
Q ss_pred HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
++.+++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+.+ ...++..+....++++++
T Consensus 168 ~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g---~~~~~~~~~~~~~~~i~~ 241 (389)
T 1o4s_A 168 EGLLVG---KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD---EFTSILDVSEGFDRIVYI 241 (389)
T ss_dssp HHTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS---CCCCHHHHCSSSTTEEEE
T ss_pred HHhccc---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCHhhcCCCCCcEEEE
Confidence 998865 56777789999999999999999999999999999999999999887642 111222322224689999
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
+|+||.+|++|+|+||+++ ++++++.+..... ....+++.+++.++...|++. + ++.+++++++
T Consensus 242 ~s~sK~~~~~G~r~G~l~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~-~--------~~~~~~~~~~ 305 (389)
T 1o4s_A 242 NGFSKSHSMTGWRVGYLIS---SEKVATAVSKIQS----HTTSCINTVAQYAALKALEVD-N--------SYMVQTFKER 305 (389)
T ss_dssp EESTTTTTCGGGCCEEEEC---CHHHHHHHHHHHH----HHTCSCCHHHHHHHHHHTTCC-C--------HHHHHHHHHH
T ss_pred eechhhcCCcccceEEEEe---CHHHHHHHHHHhh----hcccCCCHHHHHHHHHHHhcc-H--------HHHHHHHHHH
Confidence 9999999999999999854 7776666554322 223356677777777778764 2 5777888999
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecCC--CH-HHHHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLA 399 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~ 399 (410)
++++.+.|+ ++| +.+..+.+++|+|+.+ +. ++.+++++++||.+.|+ + ||+++. +++++++++
T Consensus 306 ~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-~~~~l~~~l 379 (389)
T 1o4s_A 306 KNFVVERLK-KMG----VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEAL 379 (389)
T ss_dssp HHHHHHHHH-HTT----CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHH
T ss_pred HHHHHHHHH-hcC----CeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-CHHHHHHHH
Confidence 999999998 776 4556677888888765 34 45667764579999876 2 999987 999999999
Q ss_pred HHHHHHhhh
Q 015283 400 DAIIDSYHN 408 (410)
Q Consensus 400 ~~l~~~l~~ 408 (410)
++|++++++
T Consensus 380 ~~l~~~l~~ 388 (389)
T 1o4s_A 380 DRIEDFLNS 388 (389)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 999998864
No 30
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.4e-42 Score=331.83 Aligned_cols=365 Identities=16% Similarity=0.148 Sum_probs=270.1
Q ss_pred CCCCCCCcccchhHhhhcCC-----CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283 14 TMAPPDPILGVSEAFKADTD-----EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~-----~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
...+++++.+....+..+.. +.+|||+.|.+. +.+ .++.+++++.+.+.......|.+..|..++++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~g~~~---~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~ 89 (407)
T 3nra_A 14 DNAPGQEVRQSAAGLEALIRGAPIEGRPVDFSHGDVD---AHE-PTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAP 89 (407)
T ss_dssp -------------CCTTTCCSCCCCSCCEETTSCCTT---TSC-CCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHH
T ss_pred CCCccHHHHHHhhhhHHHhhcCCCCCceeeecCcCCC---CCC-CcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHH
Confidence 45566666655543322221 247999999871 222 378899998888754323568888899999999999
Q ss_pred HhcCCCCCcccC-CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec----CCCc
Q 015283 89 LLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD----PKTV 163 (410)
Q Consensus 89 ~~~~~~~~~~~~-~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----~~~~ 163 (410)
++...++..+++ ++|++ ++||++++..++. ..+.+||+|+++.|+|.++...++..|.+++.+++.. ++++
T Consensus 90 ~l~~~~g~~~~~~~~i~~--~~g~~~a~~~~~~--~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 165 (407)
T 3nra_A 90 RLAAFTGAPVDARDGLII--TPGTQGALFLAVA--ATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRA 165 (407)
T ss_dssp HHHHHHTSCCCTTTSEEE--ESHHHHHHHHHHH--TTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSC
T ss_pred HHHHHhCCCCCCCCcEEE--eCCcHHHHHHHHH--HhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCC
Confidence 987777766655 68999 9999999999843 3367999999999999999999999999999998732 3567
Q ss_pred ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-h
Q 015283 164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-T 242 (410)
Q Consensus 164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~ 242 (410)
.+|++.+++.+.+ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++. ....+..+. .
T Consensus 166 ~~d~~~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~--~~~~~~~~~~~ 240 (407)
T 3nra_A 166 GLDLTGLEEAFKA---GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGA--SYTHLRAEAAV 240 (407)
T ss_dssp CBCHHHHHHHHHT---TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTC--CCCCGGGCTTS
T ss_pred CcCHHHHHHHHhh---CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCCChhhcCcc
Confidence 8999999999986 556667789999999999999999999999999999999999999886532 122222222 2
Q ss_pred cCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283 243 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 243 ~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 322 (410)
..++++++.|+||.+|++|+|+||++. ++++++.+..... ....+++.+++.++...|++.. +.+++
T Consensus 241 ~~~~~i~~~s~sK~~g~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~~------~~~~~ 307 (407)
T 3nra_A 241 DAENVVTIMGPSKTESLSGYRLGVAFG---SRAIIARMEKLQA----IVSLRAAGYSQAVLRGWFDEAP------GWMED 307 (407)
T ss_dssp CGGGEEEEECSSSTTCCGGGCCEEEEE---CHHHHHHHHHHHH----HHTSSSCHHHHGGGGGTTCCCT------THHHH
T ss_pred cCCcEEEEeCcccccCCCeeeEEEEEc---CHHHHHHHHHHHh----hhccCCChHHHHHHHHHHhccc------hHHHH
Confidence 346899999999999999999999855 7886666554332 2233556667777767776431 22456
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCCC----------eEE
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKDG----------RIS 386 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~g----------Ris 386 (410)
.+++++++++.+.+.|+ +++. +.+..+.+++|+|+.+ +. ++...+++++||.+.|+. ||+
T Consensus 308 ~~~~~~~~~~~l~~~L~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis 383 (407)
T 3nra_A 308 RIARHQAIRDELLHVLR-GCEG---VFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLN 383 (407)
T ss_dssp HHHHHHHHHHHHHHHHH-TSTT---CBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEE
T ss_pred HHHHHHHHHHHHHHHHh-cCCC---ceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE
Confidence 77888889999999998 7731 5666778889988754 33 456667666799998752 999
Q ss_pred ecCCCcccHHHHHHHHHHHhhhc
Q 015283 387 LAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 387 ~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
++. +++++++++++|+++++++
T Consensus 384 ~~~-~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 384 FSQ-DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp CCS-CHHHHHHHHHHHHHHHHHH
T ss_pred eCC-CHHHHHHHHHHHHHHHHHh
Confidence 987 9999999999999998764
No 31
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-41 Score=323.08 Aligned_cols=362 Identities=11% Similarity=0.107 Sum_probs=273.2
Q ss_pred eecccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHH
Q 015283 5 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK 84 (410)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 84 (410)
..|....+++..+++.+..+. .+... +++|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++..|..++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~ 74 (386)
T 1u08_A 4 NPLIPQSKLPQLGTTIFTQMS-ALAQQ--HQAINLSQGFP----DFD-GPRYLQERLAHHVAQGA-NQYAPMTGVQALRE 74 (386)
T ss_dssp -CCCCCCSCCCCCCCHHHHHH-HHHHH--TTCEECCCSSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHH
T ss_pred CCCccchhhhcCCccHHHHHH-HHHhc--CCeEEecCCCC----CCC-CCHHHHHHHHHHHHhhc-cCCCCCCCCHHHHH
Confidence 446666677777665443333 22222 46899999987 222 36889999888775433 67887789999999
Q ss_pred HHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCc
Q 015283 85 VTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV 163 (410)
Q Consensus 85 aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 163 (410)
++++++.+.+|..++++ +|++ ++||++++.+++..+ +.+||+|++++|+|..+...++..|.+++.+++.+ +++
T Consensus 75 ~la~~l~~~~g~~~~~~~~v~~--~~g~~~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~ 149 (386)
T 1u08_A 75 AIAQKTERLYGYQPDADSDITV--TAGATEALYAAITAL--VRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQP-PHF 149 (386)
T ss_dssp HHHHHHHHHHSCCCCTTTTEEE--ESSHHHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCT-TTC
T ss_pred HHHHHHHHHhCCCCCCCCCEEE--cCChHHHHHHHHHHh--CCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCc-ccC
Confidence 99999866556556678 9999 999999999984433 67999999999999999999999999999998843 357
Q ss_pred ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283 164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243 (410)
Q Consensus 164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 243 (410)
.+|++.+++.+.+ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+.+.. ..++..+...
T Consensus 150 ~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~ 224 (386)
T 1u08_A 150 RVDWQEFAALLSE---RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQG--HASVLAHPQL 224 (386)
T ss_dssp CCCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSC--CCCGGGSHHH
T ss_pred cCCHHHHHHhhcc---cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCC--CcChhcccCc
Confidence 8999999998864 6777777899999999999999999999999999999999999998764221 1122122112
Q ss_pred CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
.+++++++|+||.+|++|+|+||+++ ++++++.+..... ....+++.+++.++...|++. .+++++.
T Consensus 225 ~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~------~~~~~~~ 291 (386)
T 1u08_A 225 RERAVAVSSFGKTYHMTGWKVGYCVA---PAPISAEIRKVHQ----YLTFSVNTPAQLALADMLRAE------PEHYLAL 291 (386)
T ss_dssp HTTEEEEEEHHHHTTCGGGCCEEEEC---CHHHHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHC------THHHHTH
T ss_pred cCcEEEEecchhhcCCcccceEEEEc---CHHHHHHHHHHHH----hhccCCChHHHHHHHHHHhCC------cHHHHHH
Confidence 35899999999999999999999854 6776666554322 112345566667666666532 2335688
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCC--------C----e
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKD--------G----R 384 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~--------g----R 384 (410)
+++++++++++.+.|+ +.| +.+..+.+++|+|+.+ +. ++.+++++++||.+.|+ + |
T Consensus 292 ~~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iR 366 (386)
T 1u08_A 292 PDFYRQKRDILVNALN-ESR----LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIR 366 (386)
T ss_dssp HHHHHHHHHHHHHHTT-SSS----CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEE
T ss_pred HHHHHHHHHHHHHHHH-HCC----CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEE
Confidence 8999999999999998 776 4666777788888744 23 34566776679999764 2 9
Q ss_pred EEecCCCcccHHHHHHHHHH
Q 015283 385 ISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 385 is~~~~~~~~i~~~~~~l~~ 404 (410)
|+++. +++++++++++|++
T Consensus 367 is~~~-~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 367 LCFAK-KESTLLAAAERLRQ 385 (386)
T ss_dssp EECCS-CHHHHHHHHHHHTT
T ss_pred EEEcC-CHHHHHHHHHHHhh
Confidence 99987 89999999999864
No 32
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=9.7e-41 Score=323.57 Aligned_cols=356 Identities=16% Similarity=0.181 Sum_probs=273.4
Q ss_pred hHhhhcCCC-CeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CC----------ccCcCCcccHHHHHHHHHHhcCC
Q 015283 26 EAFKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN----------KEYLPIEGLAAFNKVTAELLFGA 93 (410)
Q Consensus 26 ~~~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~----------~~y~~~~g~~~lr~aia~~~~~~ 93 (410)
+.|+.+.+| .+|+|+.+.. +...+.+.+++.+..... +. ..|.+..|.+++|+++++++...
T Consensus 29 ~~y~~~~~p~~~i~lg~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~ 102 (435)
T 3piu_A 29 NPYHEVHNTNGIIQMGLAEN------QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEI 102 (435)
T ss_dssp SBCBTTTBTTSBEECSSCCC------CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCcccCCCCeEEeccccc------cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHh
Confidence 345555555 6789987654 444688888887755321 11 46988899999999999998733
Q ss_pred --CCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcccChhhH
Q 015283 94 --DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGM 170 (410)
Q Consensus 94 --~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l 170 (410)
.+..+++++|++ ++||++++..++.. .+.+||.|++++|+|.++...+. ..|.+++.+++.+..++.+|++.+
T Consensus 103 ~~~~~~~~~~~v~~--~~gg~~a~~~~~~~--l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 178 (435)
T 3piu_A 103 RGNKVTFDPNHLVL--TAGATSANETFIFC--LADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETAL 178 (435)
T ss_dssp TTTSSCCCGGGEEE--EEHHHHHHHHHHHH--HCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHH
T ss_pred hCCCCCCCHHHEEE--cCChHHHHHHHHHH--hcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHH
Confidence 334566889999 99999999998433 36799999999999999998888 789999999986555678999999
Q ss_pred HHHHhc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc----
Q 015283 171 IADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR---- 243 (410)
Q Consensus 171 ~~~i~~---~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~---- 243 (410)
++.+++ ...+++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+. ...++..+...
T Consensus 179 ~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~d 256 (435)
T 3piu_A 179 EEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP--SFISVMEVLKDRNCD 256 (435)
T ss_dssp HHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS--CCCCHHHHHHC----
T ss_pred HHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcCHHHhccccccc
Confidence 998875 123677788899999999999999999999999999999999999998766432 22233233332
Q ss_pred -----CCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283 244 -----GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 318 (410)
Q Consensus 244 -----~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~ 318 (410)
.+++++++|+||.+|++|+|+||+ +++++++.+.+.. .. .+...+.+++.++..++.+.++. .+
T Consensus 257 ~~~~~~~~~i~i~s~sK~~g~~G~r~G~~--~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~l~~~~~~---~~ 325 (435)
T 3piu_A 257 ENSEVWQRVHVVYSLSKDLGLPGFRVGAI--YSNDDMVVAAATK----MS--SFGLVSSQTQHLLSAMLSDKKLT---KN 325 (435)
T ss_dssp ---CGGGGEEEEEESSSSSCCGGGCEEEE--EESCHHHHHHHHH----HG--GGSCCCHHHHHHHHHHHHCHHHH---HH
T ss_pred cccCCCCCEEEEEeeecccCCCceeEEEE--EeCCHHHHHHHHH----Hh--hcCCCCHHHHHHHHHHhcChHHH---HH
Confidence 568899999999999999999998 4555564444432 22 22345667777777777776542 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----------HHHHHHhhhcCcEEEcCC-----
Q 015283 319 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------KAQSDNMTNKWHVYMTKD----- 382 (410)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~~----- 382 (410)
++++.+++++++++++.+.|+ +.| +.+..+.+++|+|+.+. .+++.++++++||.+.|+
T Consensus 326 ~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~ 400 (435)
T 3piu_A 326 YIAENHKRLKQRQKKLVSGLQ-KSG----ISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHC 400 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTT----CEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcC----CcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCC
Confidence 567888999999999999998 877 46777888899988652 145677777779999874
Q ss_pred ---C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 383 ---G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 383 ---g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ ||+++..+++++++++++|+++++++
T Consensus 401 ~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 401 TEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp SSTTEEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 1 99997668999999999999998764
No 33
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.6e-42 Score=328.21 Aligned_cols=365 Identities=14% Similarity=0.092 Sum_probs=273.7
Q ss_pred cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 86 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai 86 (410)
|+.+.++...+++.+..+.+.. . .++.|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++..|..++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~l 71 (411)
T 2o0r_A 1 MATVSRLRPYATTVFAEMSALA-T--RIGAVNLGQGFP----DED-GPPKMLQAAQDAIAGGV-NQYPPGPGSAPLRRAI 71 (411)
T ss_dssp -CCCGGGGGGSSCHHHHHHHHH-H--TTTCEESSCSSC----SSC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHH
T ss_pred CchhhHhHhcCccHHHHHHHHh-h--cCCeeeccCcCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHH
Confidence 4555666667666444433222 2 246899999986 222 36889999888875543 6788888999999999
Q ss_pred HHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecC-CCcc
Q 015283 87 AELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVG 164 (410)
Q Consensus 87 a~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~ 164 (410)
++++...+|..++++ +|++ ++||++++.+++.. .+.+||+|++++|+|..+...++..|.+++.+++.++ +++.
T Consensus 72 a~~~~~~~g~~~~~~~~v~~--t~g~~~al~~~~~~--~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 147 (411)
T 2o0r_A 72 AAQRRRHFGVDYDPETEVLV--TVGATEAIAAAVLG--LVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFA 147 (411)
T ss_dssp HHHHHHHHCCCCCTTTSEEE--EEHHHHHHHHHHHH--HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEE
T ss_pred HHHHHHHcCCCCCCCceEEE--eCCHHHHHHHHHHH--hcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCC
Confidence 999876656666677 8999 99999999998443 3679999999999999999999999999999987543 3567
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
+|++.+++.+++ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+. ...++..+....
T Consensus 148 ~d~~~l~~~l~~---~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~ 222 (411)
T 2o0r_A 148 LDADALRRAVTP---RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA--RHLPLAGFDGMA 222 (411)
T ss_dssp CCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTTG
T ss_pred CCHHHHHHhhcc---CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcChhhccCCC
Confidence 899999999864 677777889999999999999999999999999999999999999876421 111222221124
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 324 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 324 (410)
+.++++.|+||.+|++|+|+||+++ ++++++.+...... ...+++..++.++...|+.. .+++++.+
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~~~~----~~~~~~~~~~~a~~~~l~~~------~~~~~~~~ 289 (411)
T 2o0r_A 223 ERTITISSAAKMFNCTGWKIGWACG---PAELIAGVRAAKQY----LSYVGGAPFQPAVALALDTE------DAWVAALR 289 (411)
T ss_dssp GGEEEEEEHHHHTTCTTTCEEEEEC---CHHHHHHHHHHHHH----HTSCCCTTHHHHHHHHHHHC------HHHHHHHH
T ss_pred CCEEEEeechhhcCCccceEEEEee---CHHHHHHHHHHHhh----ccCCCChHHHHHHHHHHhCC------hHHHHHHH
Confidence 5799999999999999999999854 77866665543221 12234455566665555432 23456888
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCC---------------
Q 015283 325 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKD--------------- 382 (410)
Q Consensus 325 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~--------------- 382 (410)
++++++++++.+.|+ +.| +.+..+.+++|+|+.+ +. ++..++++++||.+.|+
T Consensus 290 ~~~~~~~~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~ 364 (411)
T 2o0r_A 290 NSLRARRDRLAAGLT-EIG----FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQA 364 (411)
T ss_dssp HHHHHHHHHHHHHHH-HHT----CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------
T ss_pred HHHHHHHHHHHHHHH-HcC----CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccc
Confidence 899999999999998 776 4666777888888754 23 44666776679998642
Q ss_pred --C----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 383 --G----RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 383 --g----Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+ ||+++. +++++++++++|++++++
T Consensus 365 ~~~~~~iRis~~~-~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 365 DVWNHLVRFTFCK-RDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp CCGGGCEEEECCS-CHHHHHHHHHHHGGGGC-
T ss_pred cCCCCeEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 2 999986 899999999999988764
No 34
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2.4e-41 Score=329.14 Aligned_cols=340 Identities=15% Similarity=0.145 Sum_probs=261.1
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
++++|+|+.|++ +.+ .++.+.+++.+.+.. .....|++..|.+++|+++++++. ++..+++++|++ +
T Consensus 68 ~~~~i~l~~g~~----~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~--t 138 (449)
T 3qgu_A 68 DAKIISLGIGDT----TEP-LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFI--S 138 (449)
T ss_dssp TCCCEECSSCCC----CCC-CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEE--E
T ss_pred CCCEEEeeCCCC----CCC-CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEE--c
Confidence 457999999976 333 378888888777652 223679888999999999999986 666777899999 9
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC----------ccceeeecCCCcccChhhHHHHHhcCC
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP----------WSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~----------~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
+|+++++..+ . ..+.+||+|++++|+|.++...++..|.+ ++.+++.+++++..|+++.
T Consensus 139 ~G~~~al~~~-~--~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 207 (449)
T 3qgu_A 139 DGSKCDIARI-Q--MMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-------- 207 (449)
T ss_dssp SCHHHHHHHH-H--HHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC--------
T ss_pred cCHHHHHHHH-H--HHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc--------
Confidence 9999999986 2 34679999999999999999999999988 8888885544555555432
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ....+..+....++++++.|+||.+|
T Consensus 208 ~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g 285 (449)
T 3qgu_A 208 KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD--CPKTIYEIPGADEVAIETCSFSKYAG 285 (449)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTT--SCSSGGGSTTGGGTEEEEEECSGGGT
T ss_pred CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCC--CCCCHhhccCCCCcEEEEecchhhcC
Confidence 2455666679999999999999999999999999999999999999886531 12222222223457899999999999
Q ss_pred ccCCCcceEEEEeCCchhHHH----HHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAAR----VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 334 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (410)
++|+|+||+++ ++++++. +...+.......+.+++.+++.++...+.+.. .+++++.+++++++++++
T Consensus 286 ~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l 357 (449)
T 3qgu_A 286 FTGVRLGWTVV---PKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG-----LKEMNAMIKFYKENAQIL 357 (449)
T ss_dssp CTTCCCEEEEC---CTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred CccceeEEEec---CHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC-----HHHHHHHHHHHHHHHHHH
Confidence 99999999844 5554431 11112222222445678888888888877532 245678899999999999
Q ss_pred HHHhhhccCCCCCcccccCCcceeeecCC---C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHH
Q 015283 335 FDSLSAKDKSGKDWSFILRQIGMFSFTGL---N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLAD 400 (410)
Q Consensus 335 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~ 400 (410)
.+.|+ ++| +.+..+.+++|+|+.+ + .+++.++++++||.+.|| + ||+++. ++++++++++
T Consensus 358 ~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~ 431 (449)
T 3qgu_A 358 KTTFT-EMG----FSVYGGDDAPYIWVGFPGKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVR 431 (449)
T ss_dssp HHHHH-HTT----CCEEESSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHH
T ss_pred HHHHH-HCC----CeeeCCCCeeEEEEECCCCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHH
Confidence 99999 887 4667788899999865 3 455778888779999875 2 999877 9999999999
Q ss_pred HHHHHhhh
Q 015283 401 AIIDSYHN 408 (410)
Q Consensus 401 ~l~~~l~~ 408 (410)
+|++++++
T Consensus 432 ~l~~~~~~ 439 (449)
T 3qgu_A 432 RFKEAYGK 439 (449)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99999865
No 35
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=4.5e-41 Score=325.46 Aligned_cols=359 Identities=18% Similarity=0.231 Sum_probs=272.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHH--HHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCc---eEEEec
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVV--KKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR---VATVQG 108 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v--~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~---i~~~~t 108 (410)
+++|||+.|.+. ..+. ++.+ .+++.+.+.......|++..|..++|+++++++.+.+ ..+++++ |++ |
T Consensus 47 ~~~i~l~~g~~~-~~~~---~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~--t 119 (430)
T 2x5f_A 47 STTYNATIGMAT-NKDG---KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIV--T 119 (430)
T ss_dssp TCSEECCCSSCE-ETTE---ECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEE--E
T ss_pred CCcEEeeeeecc-CCCC---chhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEE--c
Confidence 568999999862 1222 3444 6655555433123679888899999999999986543 4556788 988 9
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 187 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~ 187 (410)
+||++++.++... .+.+||+|++++|+|..+...++. .|.+++.+++.+++ +.+|++.+++.+++.+.++++++++
T Consensus 120 ~g~~~al~~~~~~--l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~ 196 (430)
T 2x5f_A 120 NALTHGLSLVGDL--FVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILN 196 (430)
T ss_dssp SHHHHHHHHHHHH--HCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEEC
T ss_pred CCchHHHHHHHHH--HhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEc
Confidence 9999999998443 367999999999999999999998 99999999885433 7799999999997644467787889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHH-----cCCcccccccCCCCCCCCCCCchhHhH-HHhhcCCc---EEEEeccccccc
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDNDASSVR-LFATRGME---LLVAQSYSKNLG 258 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~-----~~~~li~Deay~~~~~~~~~~~~~~~~-~~~~~~~~---~i~~~S~sK~~~ 258 (410)
+|+||||.+++.+++++|+++|++ ||+++|+||+|.++.+++. ...++. .+....++ +++++|+||.+|
T Consensus 197 ~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 274 (430)
T 2x5f_A 197 YPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV--YTQSLFTALTNLHSNAILPIRLDGATKEFF 274 (430)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS--CCSCHHHHHHTTCCTTEEEEEEEEHHHHTT
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc--cchHHHHHHhhccCCcceEEEEEecccCCC
Confidence 999999999999999999999999 9999999999999886421 111222 22223557 999999999999
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG-NPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
++|+|+||+++...++++++.+........+..+.+++.+++.++...|+ +.+ |.+++++.+++++++++.+.+.
T Consensus 275 ~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~~~l~~~ 350 (430)
T 2x5f_A 275 AWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQ----FDKEIEQNIQTLKERYEVTKEV 350 (430)
T ss_dssp CGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999843224777777766544322222445678888888888887 753 4556677899999999999999
Q ss_pred hhhccCCCCCcccccCCcceeeecCC---CH-HHHHHhhhcCcEEEcCCC----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 338 LSAKDKSGKDWSFILRQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~g----Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|+ +......+.+..+.+++|+|+.+ +. ++...+++++||.+.||+ ||+++..+++++++++++|+++++++
T Consensus 351 L~-~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 351 VY-ADQYHSHWQAYDFNSGYFMAIKVHDVDPEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp HT-CGGGTTTEEECCCCBSSEEEEEESSSCHHHHHHHHHHHHCEECEECSSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred HH-hhCCCCCceeeCCCceEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 87 53100125667778888888754 34 456677664799999863 99998448999999999999998765
No 36
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=3.5e-41 Score=320.46 Aligned_cols=350 Identities=16% Similarity=0.094 Sum_probs=267.7
Q ss_pred CCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCC
Q 015283 19 DPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 96 (410)
Q Consensus 19 ~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~ 96 (410)
.++..+.+.... ..+.++|||+.|.+ ..+ .++.+.+++.+.+.......|++..|..++|+++++++.+.+|.
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~idl~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~ 82 (376)
T 2dou_A 8 SVFLVVDEAKRKARERGVGLIDLSIGST----DLP-PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGV 82 (376)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEECSSCCC----CCC-CCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred chHHHHHHHHHHhhccCCCEEeccCCCC----CCC-CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 333444443332 23457899999987 222 26889999988875432367876678999999999998665565
Q ss_pred cccCC-ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh
Q 015283 97 VLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 175 (410)
Q Consensus 97 ~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 175 (410)
+++++ +|++ ++|+++++.++... .+.+||+|++++|+|..+...++..|.+++.+++ ++++.+|++.+++.+.
T Consensus 83 ~~~~~~~v~~--~~g~~~a~~~~~~~--l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~ 156 (376)
T 2dou_A 83 GLDPRREALA--LIGSQEGLAHLLLA--LTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVW 156 (376)
T ss_dssp CCCTTTSEEE--ESSHHHHHHHHHHH--HCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHH
T ss_pred CCCCCccEEE--cCCcHHHHHHHHHH--hcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhc
Confidence 55566 8999 99999999998433 3669999999999999999999999999999987 4567789999998886
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283 176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 255 (410)
Q Consensus 176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 255 (410)
. +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++. ..++....+..+++++++|+||
T Consensus 157 ~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK 230 (376)
T 2dou_A 157 R---EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE---APSPLALPGAKERVVELFSLSK 230 (376)
T ss_dssp H---HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC---CCCGGGSTTGGGTEEEEEEHHH
T ss_pred c---CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCCCCCcEEEEecchh
Confidence 4 567777789999999999999999999999999999999999998875421 1111122233457899999999
Q ss_pred cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
.+|++|+|+||++. ++++++++..... ....+++..++.++...|++. .+++++.+++++++++++.
T Consensus 231 ~~~~~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~ 297 (376)
T 2dou_A 231 SYNLAGFRLGFALG---SEEALARLERVKG----VIDFNQYAGVLRMGVEALKTP------KEVVRGYARVYRERALGMA 297 (376)
T ss_dssp HHTCGGGCCEEEEE---CHHHHHHHHHHHH----HHCCCSCHHHHHHHHHHHTSC------HHHHHHHHHHHHHHHHHHH
T ss_pred hcCChhheeEEEec---CHHHHHHHHHHHH----hcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHH
Confidence 99999999999855 7887666654322 122345677777777778763 2345788889999999999
Q ss_pred HHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHH
Q 015283 336 DSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLAD 400 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~ 400 (410)
+.|+ +. + .+..+.+++|+|+.+ + .++.+.++++ ||.+.|+ + ||+++. ++++++++++
T Consensus 298 ~~L~-~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~ 369 (376)
T 2dou_A 298 EALK-GV-L----SLLPPRATMYLWGRLPEGVDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAK 369 (376)
T ss_dssp HHHT-TT-S----EECCCCBSSEEEEECCTTCCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHH
T ss_pred HHHH-Hh-c----CccCCCeeEEEEEECCCCCCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHH
Confidence 9998 65 2 555677888888754 2 3456677765 9999875 2 999987 8999999999
Q ss_pred HHHHHh
Q 015283 401 AIIDSY 406 (410)
Q Consensus 401 ~l~~~l 406 (410)
+|++++
T Consensus 370 ~l~~~l 375 (376)
T 2dou_A 370 RIREAL 375 (376)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 999875
No 37
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=4.7e-41 Score=325.23 Aligned_cols=344 Identities=14% Similarity=0.049 Sum_probs=265.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g 110 (410)
+++|+|+.|.+ ..+ .++.+.+++.+.+... ....|++..|..++|+++++++.+.+|.+++++ +|++ ++|
T Consensus 37 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~--~~g 109 (429)
T 1yiz_A 37 YKPLNLGQGFP----DYH-APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLV--TVG 109 (429)
T ss_dssp HCCEECCSSSC----SSC-CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEE--ESH
T ss_pred CCEEEecCCCC----CCC-CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEE--ecC
Confidence 46899999987 222 3689999988887541 136787778999999999999866555556678 9999 999
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC--------CcccChhhHHHHHhcCCCCcE
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAAPGGSF 182 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~~~~~~ 182 (410)
|++++.++... .+.+||+|+++.|+|..+...++..|.+++.+++.+++ ++.+|++.+++.+++ +++
T Consensus 110 ~~~a~~~~~~~--~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~ 184 (429)
T 1yiz_A 110 AYEALYATIQG--HVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE---KTK 184 (429)
T ss_dssp HHHHHHHHHHH--HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT---TEE
T ss_pred hHHHHHHHHHH--hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhcc---Cce
Confidence 99999998443 36799999999999999999999999999999885432 567999999998864 677
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283 183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 262 (410)
++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+.+.. ..++..+....++++++.|+||.+|++|+
T Consensus 185 ~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 262 (429)
T 1yiz_A 185 MIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFE--HIRICTLPGMWERTITIGSAGKTFSLTGW 262 (429)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSC--CCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCC--CcChhhccCCcCceEEEecchhccCCCCc
Confidence 7777899999999999999999999999999999999999998864221 11221221234589999999999999999
Q ss_pred CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC-----hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN-----PALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
|+||+++ ++++++.+.... .....+++..++.++...|++ ... .+++++.+++++++++++.+.
T Consensus 263 r~G~~~~---~~~~~~~l~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~ 331 (429)
T 1yiz_A 263 KIGWAYG---PEALLKNLQMVH----QNCVYTCATPIQEAIAVGFETELKRLKSP----ECYFNSISGELMAKRDYMASF 331 (429)
T ss_dssp CCEEEES---CHHHHHHHHHHH----HTTTCCCCHHHHHHHHHHHHHHHTTTTST----TSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEe---CHHHHHHHHHHH----hhcccCCChHHHHHHHHHHhcccccccch----HHHHHHHHHHHHHHHHHHHHH
Confidence 9999844 677666654432 222334666677777666654 211 234578889999999999999
Q ss_pred hhhccCCCCCcccccCCcceeeecCCC----------------H-HHHHHhhhcCcEEEcCC-------------C--eE
Q 015283 338 LSAKDKSGKDWSFILRQIGMFSFTGLN----------------K-AQSDNMTNKWHVYMTKD-------------G--RI 385 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~ll~~~gi~v~~~-------------g--Ri 385 (410)
|+ +.| +.+..+.+++|+|+.+. . +++.++++++||.+.|+ + ||
T Consensus 332 L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRi 406 (429)
T 1yiz_A 332 LA-EVG----MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRY 406 (429)
T ss_dssp HH-HHT----CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEE
T ss_pred HH-hCC----CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEE
Confidence 98 876 46667778888887542 2 34566776679999763 2 99
Q ss_pred EecCCCcccHHHHHHHHHHHhhh
Q 015283 386 SLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 386 s~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+++. +++++++++++|+++++.
T Consensus 407 s~~~-~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 407 CFFK-KDENLQKAAEILRKWKGS 428 (429)
T ss_dssp ECCS-CHHHHHHHHHHHHHHSCC
T ss_pred EecC-CHHHHHHHHHHHHHhccC
Confidence 9986 999999999999998764
No 38
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=8.4e-41 Score=317.76 Aligned_cols=350 Identities=12% Similarity=0.052 Sum_probs=269.4
Q ss_pred CCCCCcccchhHhhhcC-CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283 16 APPDPILGVSEAFKADT-DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD 94 (410)
Q Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~ 94 (410)
++++++.++...+++.. +.++|||+.|.+ ..+ .++.+.+++.+.+.. ...|++..|..++|+++++++.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~ 76 (376)
T 3ezs_A 4 FEPYPFERLRALLKEITPKKRGLDLGIGEP----QFE-TPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRF 76 (376)
T ss_dssp CCCCHHHHHHHHHTTCCCSSCCCBCSSCCC----CSC-CCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHhhhccCCEEEeCCCCC----CCC-CCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 45666777766665422 338999999987 333 368999999887732 3779888899999999999987666
Q ss_pred CCcccCCceEEEecCChhhHHHHHHHHHHHhCC--CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHH
Q 015283 95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 172 (410)
+..+++++|++ |+||++++.++... .+.+ ||+|+++.|+|..+...++..|.+++.+++.+.++ +++ .+++
T Consensus 77 g~~~~~~~i~~--t~g~~~al~~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~-~l~~ 149 (376)
T 3ezs_A 77 KIELKENELIS--TLGSREVLFNFPSF--VLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKEND--FTP-SLNE 149 (376)
T ss_dssp SCCCCGGGEEE--ESSSHHHHHHHHHH--HTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGT--SCC-CCCH
T ss_pred CCCCCHHHEEE--CcCcHHHHHHHHHH--HcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCC--cch-hHHh
Confidence 66667899999 99999999998443 3678 99999999999999999999999999999854333 343 5666
Q ss_pred HHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-----cCCcE
Q 015283 173 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-----RGMEL 247 (410)
Q Consensus 173 ~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-----~~~~~ 247 (410)
.+.+ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ ...++..... ..+++
T Consensus 150 ~~~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 223 (376)
T 3ezs_A 150 KELQ---EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT---PPPSLLEACMLAGNEAFKNV 223 (376)
T ss_dssp HHHH---HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS---CCCCHHHHHHHTTCTTCTTE
T ss_pred hhcc---CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC---CCCCHHHccccccccccCcE
Confidence 6654 45566668999999999999999999999999999999999999988653 1222222222 45789
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
+++.|+||.+|++|+|+||++. ++++++.+... ......+++..++.++...|++.+ ++++.++++
T Consensus 224 i~~~s~sK~~g~~G~r~G~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~ 289 (376)
T 3ezs_A 224 LVIHSLSKRSSAPGLRSGFIAG---DSRLLEKYKAF----RAYLGYTSANAIQKASEAAWLDDR-------HAEFFRNIY 289 (376)
T ss_dssp EEEEESTTTTTCGGGCCEEEEE---CHHHHHHHHHH----HTTTCCCCCHHHHHHHHHHHHCSH-------HHHHHHHHH
T ss_pred EEEecchhccCCccceeEEEee---CHHHHHHHHHH----HhhhcCCCChHHHHHHHHHHhCcH-------HHHHHHHHH
Confidence 9999999999999999999855 88866665442 222334567777787777777542 346888889
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC--HHHHHHhhhcCcEEEcCC----------C--eEEecCCCcc
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--KAQSDNMTNKWHVYMTKD----------G--RISLAGLSLA 393 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~ 393 (410)
+++++.+.+.|+ + +. .+.+++|+|+.+. .++..++++++||.+.|| + ||+++. +++
T Consensus 290 ~~~~~~l~~~l~---~----~~--~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~ 359 (376)
T 3ezs_A 290 ANNLKLARKIFK---N----TL--IYPYSFYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTP 359 (376)
T ss_dssp HHHHHHHHHHST---T----CC--CCSBSSEEEEECSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHH
T ss_pred HHHHHHHHHHhc---C----CC--CCCcceEEEEECCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHH
Confidence 999999988775 3 33 5678889988763 455667776579999763 1 999987 999
Q ss_pred cHHHHHHHHHHHhhhc
Q 015283 394 KCEYLADAIIDSYHNV 409 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~~ 409 (410)
++++++++|++++++.
T Consensus 360 ~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 360 LLEKPLEIIETYRENH 375 (376)
T ss_dssp HHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998764
No 39
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=8.5e-41 Score=322.95 Aligned_cols=371 Identities=15% Similarity=0.173 Sum_probs=270.8
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHH---------HhhccCCCccCcCCcccH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAEN---------LMLERGENKEYLPIEGLA 80 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~---------~~~~~~~~~~y~~~~g~~ 80 (410)
+.++...+++.+..+....... .+++|+|+.|.| +...+|. ..+..++. +.... ...|.+..|.+
T Consensus 8 s~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~p-~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~ 81 (425)
T 2r2n_A 8 TAASAARNPSPIRTMTDILSRG-PKSMISLAGGLP-NPNMFPF--KTAVITVENGKTIQFGEEMMKR--ALQYSPSAGIP 81 (425)
T ss_dssp CHHHHTCCCCSGGGHHHHHHHS-CTTCEECCCCCC-CGGGCSE--EEEEEEETTSCCEEECHHHHHH--HTSCCCTTCCH
T ss_pred HHHHhcCCCchHHHHHHHhhcC-CCCeEEcCCcCC-CchhCCH--HHHHHHHhhcccccccccchhh--hcCCCCCCCCH
Confidence 4456677888887777665543 257899999998 2222221 11100000 00001 25698999999
Q ss_pred HHHHHHHHHhcCCCCCccc-------CCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcc
Q 015283 81 AFNKVTAELLFGADNSVLK-------EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS 153 (410)
Q Consensus 81 ~lr~aia~~~~~~~~~~~~-------~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 153 (410)
++|+++++++.+.++...+ +++|++ |+|+++++.+++.. .+.+||+|++++|+|..+...++..|.+++
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~--t~G~~~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 157 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCV--TSGSQQGLCKVFEM--IINPGDNVLLDEPAYSGTLQSLHPLGCNII 157 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEE--ESSHHHHHHHHHHH--HCCTTCEEEEESSCCHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEE--eCcHHHHHHHHHHH--hCCCCCEEEEeCCCcHHHHHHHHHcCCEEE
Confidence 9999999998766666553 368999 99999999998443 367999999999999999999999999999
Q ss_pred ceeeecCCCcccChhhHHHHHhcCC---------CCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC
Q 015283 154 EYRYYDPKTVGLDFEGMIADIKAAP---------GGSFIL-LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 223 (410)
Q Consensus 154 ~v~~~~~~~~~~d~~~l~~~i~~~~---------~~~~~i-i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~ 223 (410)
.+++.+ .++|++.+++.+++.+ ++++++ ++++||||||.++|.+++++|+++|++||++||+||+|.
T Consensus 158 ~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~ 234 (425)
T 2r2n_A 158 NVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY 234 (425)
T ss_dssp EECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG
T ss_pred EeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 998842 2589999999987321 234444 568999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHH
Q 015283 224 GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV 303 (410)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 303 (410)
++.+.+. ...++..+ +..+++++++||||.++ +|+|+||+++ ++++++++.... .....+++.++|.++
T Consensus 235 ~~~~~g~--~~~~~~~~-~~~~~~i~~~s~SK~~~-~GlRiG~~~~---~~~l~~~l~~~~----~~~~~~~~~~~q~a~ 303 (425)
T 2r2n_A 235 FLQFNKF--RVPTFLSM-DVDGRVIRADSFSKIIS-SGLRIGFLTG---PKPLIERVILHI----QVSTLHPSTFNQLMI 303 (425)
T ss_dssp GGBSSSS--CCCCTGGG-CTTSCEEEEEESTTTTC-STTCCEEEEE---EHHHHHHHHHHH----HTTTCSSCHHHHHHH
T ss_pred cccCCCC--CCCCcccc-CCCCCEEEEccchhhcc-CccceEEEec---CHHHHHHHHHHH----HHhcCCCCHHHHHHH
Confidence 8876421 11122222 23458999999999999 9999999865 677666655432 223346778888888
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCc
Q 015283 304 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWH 376 (410)
Q Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~g 376 (410)
..+|++.. .+.|.+++++.++.++++++.+.+.|+ +. +. ..+..+.+|+|+|+.+ ..+++.+.+.++|
T Consensus 304 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~---~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~g 378 (425)
T 2r2n_A 304 SQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAAD-KWLTGL---AEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMG 378 (425)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCSSS---EEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTT
T ss_pred HHHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCC---eEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCC
Confidence 77776410 122456678899999999999999998 64 31 2345678899998754 2344455555689
Q ss_pred EEEcCC-----------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 377 VYMTKD-----------G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 377 i~v~~~-----------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|.+.|| + ||+++..+++++++++++|++++++.
T Consensus 379 v~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 379 VLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp EECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred cEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 999763 2 99998559999999999999998753
No 40
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-40 Score=321.10 Aligned_cols=369 Identities=15% Similarity=0.177 Sum_probs=272.2
Q ss_pred CCcccchhHhhhcCC-CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcC-----
Q 015283 19 DPILGVSEAFKADTD-EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG----- 92 (410)
Q Consensus 19 ~~~~~~~~~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~----- 92 (410)
+++..+.+.+....+ +++|+|+.|.| +.....+.++.+.+++.+.+.......|++..|..++|+++++++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~ 95 (416)
T 1bw0_A 17 NPIRTVSDNAKPSPSPKPIIKLSVGDP-TLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHK 95 (416)
T ss_dssp CHHHHHHHTCCCCCSCSCCEECCCCCT-TTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCS
T ss_pred cHHHHHHHHHHHhhcCCCeEEecCcCC-CcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhccc
Confidence 334444444333222 46899999987 21112233789999988887554346798778999999999999871
Q ss_pred -CCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHH
Q 015283 93 -ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI 171 (410)
Q Consensus 93 -~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 171 (410)
..+..+++++|++ ++||++++.+++..+ +.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++.++
T Consensus 96 ~~~~~~~~~~~v~~--~~g~~~al~~~~~~l--~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 171 (416)
T 1bw0_A 96 EELKSTIVKDNVVL--CSGGSHGILMAITAI--CDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIR 171 (416)
T ss_dssp TTTGGGCCGGGEEE--ESHHHHHHHHHHHHH--CCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHH
T ss_pred ccCCCCCCcceEEE--eCChHHHHHHHHHHh--CCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHH
Confidence 3566677889999 999999999984433 67999999999999999999999999999999855446789999999
Q ss_pred HHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCC--chhHhHHHhhcCCcEEE
Q 015283 172 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN--DASSVRLFATRGMELLV 249 (410)
Q Consensus 172 ~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~--~~~~~~~~~~~~~~~i~ 249 (410)
+.+++ ++.++++++|+||||.+++.+++++|+++|++||++||+||+|.++.+.+... ...++..+ ....++++
T Consensus 172 ~~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~-~~~~~~i~ 247 (416)
T 1bw0_A 172 RLKDD---KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF-ETTVPRVI 247 (416)
T ss_dssp HHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS-CCSCCEEE
T ss_pred HHhcc---CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHc-cCCCcEEE
Confidence 98874 56777778999999999999999999999999999999999999987643200 11111111 22346899
Q ss_pred EecccccccccCCCcceEEEEeCCc-hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
++|+||.++++|+|+||+++ +++ ++++++...+..... ...+++..++.++...|+... .+++++.+++++
T Consensus 248 ~~s~sK~~~~~Glr~G~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~ 319 (416)
T 1bw0_A 248 LGGTAKNLVVPGWRLGWLLY--VDPHGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEALLNTP-----QEHLDQIVAKIE 319 (416)
T ss_dssp EEESTTTTSCGGGCCEEEEE--ECTTCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHHHHSSC-----HHHHHHHHHHHH
T ss_pred EecchhhCCCCCceEEEEEe--eCchhhHHHHHHHHHHHhc-cccCCCcHHHHHHHHHHhccc-----HHHHHHHHHHHH
Confidence 99999999999999999843 443 455555543332211 122466777777777776421 233567788899
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC---------CH-HHHHHhhhcCcEEEcCC------C--eEEecCC
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------NK-AQSDNMTNKWHVYMTKD------G--RISLAGL 390 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~ll~~~gi~v~~~------g--Ris~~~~ 390 (410)
++++++.+.|+ +++ + +.+..+.+++|+|+.+ +. +++.++++++||.+.|| + ||+++.
T Consensus 320 ~~~~~l~~~L~-~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~- 394 (416)
T 1bw0_A 320 ESAMYLYNHIG-ECI--G-LAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR- 394 (416)
T ss_dssp HHHHHHHHHHT-TST--T-EEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-
T ss_pred HHHHHHHHHHH-hCC--C-CcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecC-
Confidence 99999999998 762 1 4556677788887543 23 34567766679999885 2 999965
Q ss_pred CcccHHHHHHHHHHHhhhc
Q 015283 391 SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++++|++++++.
T Consensus 395 ~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 395 PVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8999999999999998753
No 41
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.6e-41 Score=327.81 Aligned_cols=353 Identities=13% Similarity=0.087 Sum_probs=270.2
Q ss_pred cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 31 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 31 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
..++++|+|+.|.+ ..+ .++.+.+++.+.+.......|++..|..++|+++++++...++..+++++|++ |+|
T Consensus 41 ~~g~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~--t~g 113 (437)
T 3g0t_A 41 ATGTKFCRMEMGVP----GLP-APQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVP--TVG 113 (437)
T ss_dssp HHTCCCEECCCCSC----CSC-CCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESH
T ss_pred hcCCCEEeccCcCC----CCC-CCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEE--eCC
Confidence 34568999999997 333 37899999888776432377988889999999999999877777777899999 999
Q ss_pred hhhHHHHHHHHHHHh--CCCC--EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEe
Q 015283 111 GTGSLRLAAALIERY--FPGA--KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186 (410)
Q Consensus 111 gt~a~~~~~~~~~~~--~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~ 186 (410)
|++++.+++.. .+ .+|| +|+++.|+|..+...++..|.+++.+++. ++++.+|++.+++.++. ++++++++
T Consensus 114 ~t~al~~~~~~--l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~--~~~~~v~l 188 (437)
T 3g0t_A 114 SMQGCFVSFLV--ANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQT--GQFCSIIY 188 (437)
T ss_dssp HHHHHHHHHHH--HTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTT--TCCCEEEE
T ss_pred HHHHHHHHHHH--HhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhc--CCceEEEE
Confidence 99999998433 35 7999 99999999999999999999999999985 45677899999999943 25666777
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch---hHh-HHHhhcCCcEEEEecccccccccCC
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA---SSV-RLFATRGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~---~~~-~~~~~~~~~~i~~~S~sK~~~~~G~ 262 (410)
++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++ .... .++ ..+....+++++++|+||.+|++|+
T Consensus 189 ~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 267 (437)
T 3g0t_A 189 SNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQ 267 (437)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTS-CCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGG
T ss_pred eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCC-CcCcccccchhhccCCCCCcEEEEEcCccCCCCccc
Confidence 8999999999999999999999999999999999999887642 1111 000 1222236789999999999999999
Q ss_pred CcceEEEEeCCchhHH-HH---HH----------HHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 263 RIGAMNVVCSSSDLAA-RV---KS----------QLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~-~~---~~----------~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
|+||+++ ++++++ .+ .. .+.........+++.+++.++...|++.+. |.+++++.+++++
T Consensus 268 r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~ 341 (437)
T 3g0t_A 268 RIGVLMI---SGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACND---GEYNFRDSVIEYG 341 (437)
T ss_dssp CCEEEEE---CHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHT---TSCCHHHHHHHHH
T ss_pred eeEEEEE---CHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHh---HHHHHHHHHHHHH
Confidence 9999865 677555 40 00 022222222346777777777777664321 1222578889999
Q ss_pred HHHHHHHHHhhhccCCCCCcccc------cC-CcceeeecCC---CH-HHHHHhhhcCcEEEcCC--------C--eEEe
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFI------LR-QIGMFSFTGL---NK-AQSDNMTNKWHVYMTKD--------G--RISL 387 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~------~~-~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~--------g--Ris~ 387 (410)
++++++.+.|+ ++| +.+. .+ .+++|+|+.+ +. ++.+.|.+ +||.+.|+ + |||+
T Consensus 342 ~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gi~v~~~~~~~~~~~~~iRis~ 415 (437)
T 3g0t_A 342 RKARIMKKMFL-DNG----FNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFVR-YGMCAITLKTTGSKRNEAMRICT 415 (437)
T ss_dssp HHHHHHHHHHH-TTT----EEESSCEETTEECCSSSEEEEEETTCCHHHHHHHHHH-TTEECEESTTTTCCCTTCEEEEC
T ss_pred HHHHHHHHHHH-HcC----CEEeccccCCCCCceeEEEEEecCCCCHHHHHHHHHH-cCeEEeeccccCCCCCCEEEEEE
Confidence 99999999998 876 4555 24 7888888754 44 44566665 59999876 2 9999
Q ss_pred cCCCcccHHHHHHHHHHHhhh
Q 015283 388 AGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 388 ~~~~~~~i~~~~~~l~~~l~~ 408 (410)
+..+++++++++++|++++++
T Consensus 416 ~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 416 SLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp SSSCGGGHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHHHHhc
Confidence 877999999999999998764
No 42
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.6e-40 Score=319.10 Aligned_cols=360 Identities=17% Similarity=0.143 Sum_probs=269.6
Q ss_pred CCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCC
Q 015283 16 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 95 (410)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~ 95 (410)
.+..++. ..+++... +++.|+|+.|.+. ....+ .++.+.+++.+.+.... ..|++..|..++|+++++++...++
T Consensus 22 ~~~~~~~-~~~~~~~~-g~~~i~l~~~~~~-~~~~~-~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~l~~~~g 96 (406)
T 1xi9_A 22 AIRDVVL-PARELEKK-GIKVIRLNIGDPV-KFDFQ-PPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNG 96 (406)
T ss_dssp --------CHHHHHHT-TCCCEECCCCCGG-GTTCC-CCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred hHHHHHH-HHHHHHHc-CCCEEEecCCCCC-cCCCC-CCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHhcC
Confidence 3333444 44444443 4678999999861 11112 36888888888775543 5788778999999999999877666
Q ss_pred CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh
Q 015283 96 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 175 (410)
Q Consensus 96 ~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 175 (410)
..+++++|++ ++||++++.++...+ +.+||+|++++|+|.++...++..|.+++.+++.+++++.+|++.+++.++
T Consensus 97 ~~~~~~~v~~--t~g~~~al~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 172 (406)
T 1xi9_A 97 VDITPDDVRV--TAAVTEALQLIFGAL--LDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT 172 (406)
T ss_dssp CCCCGGGEEE--ESHHHHHHHHHHHHH--CCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC
T ss_pred CCCCHHHEEE--cCChHHHHHHHHHHh--CCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC
Confidence 6677889999 999999999984433 679999999999999999999999999999998543567789999999987
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc-EEEEeccc
Q 015283 176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYS 254 (410)
Q Consensus 176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~s 254 (410)
+ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ ...++..+ + .++ +++++|+|
T Consensus 173 ~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~---~~~~~~~~-~-~~~~~i~~~s~s 244 (406)
T 1xi9_A 173 D---RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG---EHISPGSL-T-KDVPVIVMNGLS 244 (406)
T ss_dssp T---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS---CCCCHHHH-C-SSSCEEEEEEST
T ss_pred c---CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC---CCCCHHHc-C-CCceEEEEeccc
Confidence 5 56777778999999999999999999999999999999999999988631 11223233 2 456 89999999
Q ss_pred ccccccCCCcceEEEEeCCc----hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 255 KNLGLYAERIGAMNVVCSSS----DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 255 K~~~~~G~r~G~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
|.++++|+|+||+++ +.++ ++++++..... .. .+++..++.++...|+... +.+++.+++++++
T Consensus 245 K~~~~~G~r~G~~~~-~~~~~~~~~l~~~l~~~~~----~~-~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~~~ 312 (406)
T 1xi9_A 245 KVYFATGWRLGYMYF-VDPENKLSEVREAIDRLAR----IR-LCPNTPAQFAAIAGLTGPM------DYLKEYMKKLKER 312 (406)
T ss_dssp TTTCCGGGCCEEEEE-ECTTCTTHHHHHHHHHHHH----HT-CCSCSHHHHHHHHHHHSCC------HHHHHHHHHHHHH
T ss_pred cccCCCccEEEEEEE-ecCchhHHHHHHHHHHHHH----hh-cCCCHHHHHHHHHHHhCCc------HHHHHHHHHHHHH
Confidence 999999999999851 1366 76666554322 12 3455666777777774321 1246778889999
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceeeecC------CCH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcc
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG------LNK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLA 393 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~------~~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~ 393 (410)
++++.+.|+ +++ .+.+..+.+++|+|+. .+. ++.+++++++||.+.|+ + ||+++ .+++
T Consensus 313 ~~~l~~~L~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~ 387 (406)
T 1xi9_A 313 RDYIYKRLN-EIP---GISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIE 387 (406)
T ss_dssp HHHHHHHHH-TST---TEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHH
T ss_pred HHHHHHHHH-hCC---CCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHH
Confidence 999999998 772 1566667788888753 233 44567764579999875 2 99998 5999
Q ss_pred cHHHHHHHHHHHhhhc
Q 015283 394 KCEYLADAIIDSYHNV 409 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~~ 409 (410)
++++++++|+++++++
T Consensus 388 ~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 388 ILEEAMDRFEKFMKER 403 (406)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 43
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=3.9e-41 Score=320.09 Aligned_cols=339 Identities=14% Similarity=0.115 Sum_probs=267.2
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
++++|||+.|.+ ..+ .++.+.+++.+.+.... ..|++ .+ .++|+++++++.+.++..+++++|++ |+||+
T Consensus 22 g~~~idl~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~ 91 (377)
T 3fdb_A 22 GQGVLPLWVAES----DFS-TCPAVLQAITDAVQREA-FGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFP--IPDVV 91 (377)
T ss_dssp CTTSEECCSSCC----CSC-CCHHHHHHHHHHHHTTC-CSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred CCCeeeecccCC----CCC-CCHHHHHHHHHHHHcCC-CCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEE--eCChH
Confidence 357899999976 333 37899999988876544 67877 77 89999999999877777777899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++..++. ..+.+||+|+++.|+|.++...++..|.+++.+++.+ + +|++++++.+++ +++++++++|+||
T Consensus 92 ~a~~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~--~d~~~l~~~l~~---~~~~v~i~~p~np 162 (377)
T 3fdb_A 92 RGLYIAID--HFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATG--G--INLHDVEKGFQA---GARSILLCNPYNP 162 (377)
T ss_dssp HHHHHHHH--HHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTT--S--CCHHHHHHHHHT---TCCEEEEESSBTT
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCC--C--CCHHHHHHHhcc---CCCEEEEeCCCCC
Confidence 99999843 3367999999999999999999999999999998842 2 899999999986 4667777999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++|++||+++|+||+|.++.+.+ +....++..+ ...++++++.|+||.+|++|+|+||+ ++.
T Consensus 163 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G~~--~~~ 238 (377)
T 3fdb_A 163 LGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG-QHTVAAGVSD-TAASVCITITAPSKAWNIAGLKCAQI--IFS 238 (377)
T ss_dssp TTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSCH-HHHHHEEEEECSTTTTTCGGGCCEEE--ECC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCC-CCCcccHHHc-cCCCcEEEEEeChHhccCcchhheEE--EeC
Confidence 9999999999999999999999999999999988642 0111222111 12457899999999999999999997 555
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFI 351 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~ 351 (410)
++++++.+.. .......+++.+++.++...|++. .+++++.+++++++++++.+.|+ +. +. +.+.
T Consensus 239 ~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~~---~~~~ 304 (377)
T 3fdb_A 239 NPSDAEHWQQ----LSPVIKDGASTLGLIAAEAAYRYG------TDFLNQEVAYLKNNHDFLLHEIP-KRIPG---AKIT 304 (377)
T ss_dssp SHHHHHHHHH----SCHHHHCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHSTT---CEEC
T ss_pred CHHHHHHHHH----HHHhhcCCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---ceEe
Confidence 7775555433 222223467777777776666542 23457888999999999999998 74 21 5677
Q ss_pred cCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 352 LRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 352 ~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+.++++.|+.+ +.+++..+++++||.+.|| + ||+++. +++++++++++|+++++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 305 PMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp CCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHTTC
T ss_pred cCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 788888887744 3456788888779999875 2 999987 8999999999999998764
No 44
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=7.9e-40 Score=316.54 Aligned_cols=347 Identities=13% Similarity=0.150 Sum_probs=264.0
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhc--------c--CCCccCcCCcccHHHHHHHHHHhcCCCCCc--ccCCc
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE--------R--GENKEYLPIEGLAAFNKVTAELLFGADNSV--LKEQR 102 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~--------~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~--~~~~~ 102 (410)
.+|+|+.+.+ +..++.+.+++.+... . .....|++..|..++|+++++++...++.. +++++
T Consensus 37 ~~i~l~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 37 GVIQMGLAEN------QLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp SBEECSSCCC------CSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred ceeeeccccc------hhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 5788887664 3335678877775421 0 012678877889999999999987666644 56789
Q ss_pred eEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-hhCCCCccceeeecCCCcccChhhHHHHHhc---CC
Q 015283 103 VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWSEYRYYDPKTVGLDFEGMIADIKA---AP 178 (410)
Q Consensus 103 i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~ 178 (410)
|++ ++|+++++.+++. ..+.+||+|++++|+|..+...+ ...|.+++.+++.+++++.+|++.+++.+++ ..
T Consensus 111 i~~--~~G~~~ai~~~~~--~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 186 (428)
T 1iay_A 111 VVM--AGGATGANETIIF--CLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSN 186 (428)
T ss_dssp CEE--EEHHHHHHHHHHH--HHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTT
T ss_pred EEE--ccChHHHHHHHHH--HhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcC
Confidence 999 9999999999843 33679999999999999997755 4689999999885445678899999988864 12
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-------CCcEEEEe
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-------GMELLVAQ 251 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~ 251 (410)
++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+... .++++++.
T Consensus 187 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~viv~~ 264 (428)
T 1iay_A 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP--QFVSIAEILDEQEMTYCNKDLVHIVY 264 (428)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS--CCCCHHHHHTSGGGTTSCTTSEEEEE
T ss_pred CceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCC--CccCHHHhccccccccCCCCcEEEEe
Confidence 3577777899999999999999999999999999999999999998765421 11122233322 46889999
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
|+||.+|++|+|+||+ ++.++++++.+... . .+.+++.+++.++..+|++.++. .+++++.++++++++
T Consensus 265 s~sK~~g~~Glr~G~~--~~~~~~~~~~~~~~----~--~~~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~~~~ 333 (428)
T 1iay_A 265 SLSKDMGLPGFRVGII--YSFNDDVVNCARKM----S--SFGLVSTQTQYFLAAMLSDEKFV---DNFLRESAMRLGKRH 333 (428)
T ss_dssp ESTTTSSCGGGCEEEE--EESCHHHHHHHHHH----H--TTSCCCHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCceEEEE--EeCCHHHHHHHHHH----H--hcccCCHHHHHHHHHHhcChHHH---HHHHHHHHHHHHHHH
Confidence 9999999999999998 45566766655432 1 12356778888888888876532 345678889999999
Q ss_pred HHHHHHhhhccCCCCCcccccCCcceeeecCCC----------H-HHHHHhhhcCcEEEcCC--------C--eEEecCC
Q 015283 332 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------K-AQSDNMTNKWHVYMTKD--------G--RISLAGL 390 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~ 390 (410)
+++.+.|+ ++| +.+..+.+++|+|+.+. . ++.+++++++||.+.++ + ||+++..
T Consensus 334 ~~l~~~L~-~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~ 408 (428)
T 1iay_A 334 KHFTNGLE-VVG----IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANM 408 (428)
T ss_dssp HHHHHHHH-HTT----CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSS
T ss_pred HHHHHHHH-hcC----CcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecC
Confidence 99999998 876 45566667889887652 1 34566666669999874 2 9999855
Q ss_pred CcccHHHHHHHHHHHhhhc
Q 015283 391 SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++++|++++++.
T Consensus 409 ~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 409 DDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp CHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 8999999999999998764
No 45
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=3e-40 Score=314.66 Aligned_cols=341 Identities=10% Similarity=0.087 Sum_probs=264.9
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
++++|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++. ..++++++++++.+.++..+++++|++ ++||+
T Consensus 23 ~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~--~~g~~ 92 (383)
T 3kax_A 23 NEELIHAWIADM----DFE-VPQPIQTALKKRIEHPI-FGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVF--SAGIV 92 (383)
T ss_dssp SSCCEECCCSSC----SSC-CCHHHHHHHHHHHHSCC-CCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred CCCeeecccccC----CCC-CCHHHHHHHHHHHhcCC-CCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEE--cCCHH
Confidence 457999999976 333 37899999988876543 667554 678999999998777676667889999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
+++.+++.. .+.+||+|+++.|+|.++...++..|.+++.+++.+++ ++.+|++.+++.+.. +++++++++|+|
T Consensus 93 ~a~~~~~~~--l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~i~~p~n 167 (383)
T 3kax_A 93 PALSTSIQA--FTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ---GVKLMLLCSPHN 167 (383)
T ss_dssp HHHHHHHHH--HCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT---TCCEEEEESSBT
T ss_pred HHHHHHHHH--hCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc---CCeEEEEeCCCC
Confidence 999998443 37799999999999999999999999999999885433 467899999999943 566667799999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEEE
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
|||.+++.+++++|+++|++||+++|+||+|.++.+.+.. ..++..+.. ..++++++.|+||.+|++|+|+||+ +
T Consensus 168 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~ 243 (383)
T 3kax_A 168 PIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHT--HTPFASLSEELAARTITCMAPSKTFNIAGLQASII--I 243 (383)
T ss_dssp TTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE--E
T ss_pred CCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCC--ceeHhhcCccccCcEEEEEEChhhccCcchhheEE--E
Confidence 9999999999999999999999999999999998864321 112212211 1368899999999999999999997 4
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcc
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWS 349 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~ 349 (410)
++++++.+.+....... .+.+++..++.++...+.+. .+++++.+++++++++++.+.|+ +. +. +.
T Consensus 244 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~~---~~ 310 (383)
T 3kax_A 244 IPNEKLRQAFTSIQYRQ---GFHGLNIFAYTAMQSAYTEC------NDWLNEIRFYIEDNAKFACEYIK-DHIPT---LS 310 (383)
T ss_dssp CCCHHHHHHHHHHHHHT---TCCCCCHHHHHHHHHHTTTC------HHHHHHHHHHHHHHHHHHHHHHH-HHCTT---CE
T ss_pred eCCHHHHHHHHHHHhhc---ccCCCCHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---ce
Confidence 55677666655433211 23356777777777777763 23457888889999999999998 74 21 56
Q ss_pred cccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHh
Q 015283 350 FILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 350 ~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
+..+.++++.|+.+ +. ++...+++++||.+.|| + ||+++. +++++++++++|++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 311 VMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC-PRSVLEEILNRLRHTF 382 (383)
T ss_dssp ECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred EecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 67788888887643 44 44666665689999885 2 999986 8999999999999886
No 46
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=3.6e-40 Score=312.79 Aligned_cols=348 Identities=14% Similarity=0.141 Sum_probs=268.4
Q ss_pred CCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHh
Q 015283 13 VTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 90 (410)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~ 90 (410)
++..+++++.++.....+. .++++|+|+.|.+ ..++ ++.+.+++.+.+.... ..|++..|..++|+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~~-~~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~ 79 (370)
T 2z61_A 6 LLNFESFEVMDILALAQKLESEGKKVIHLEIGEP----DFNT-PKPIVDEGIKSLKEGK-THYTDSRGILELREKISELY 79 (370)
T ss_dssp HHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSC----SSCC-CHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHH
T ss_pred hhhccccHHHHHHHHHHHHHhcCCCEEEccCCCC----CCCC-CHHHHHHHHHHHHcCc-cCCCCCCCCHHHHHHHHHHH
Confidence 4456666676666544432 2457899999987 3222 6889999888775543 67887789999999999998
Q ss_pred cCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhH
Q 015283 91 FGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM 170 (410)
Q Consensus 91 ~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 170 (410)
...++..+++++|++ ++||++++.++...+ +.+||+|++++|+|..+...++..|.+++.++ +|++++
T Consensus 80 ~~~~g~~~~~~~v~~--~~g~~~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l 147 (370)
T 2z61_A 80 KDKYKADIIPDNIII--TGGSSLGLFFALSSI--IDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESL 147 (370)
T ss_dssp HHHSSCCCCGGGEEE--ESSHHHHHHHHHHHH--CCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHH
T ss_pred HHHhCCCCChhhEEE--CCChHHHHHHHHHHh--cCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHH
Confidence 776677777899999 999999999985433 67999999999999999999999999887776 588999
Q ss_pred HHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 171 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 171 ~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
++.+++ +++++++++|+||||.+++.+ |.++|++||+++|+||+|..+.+++ ...++..+....++++++
T Consensus 148 ~~~l~~---~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g---~~~~~~~~~~~~~~~i~~ 217 (370)
T 2z61_A 148 EEALSD---KTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEG---KCYSAIEFDENLEKTILI 217 (370)
T ss_dssp HHHCCS---SEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSS---CCCCGGGTCTTCSSEEEE
T ss_pred HHhccc---CceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCC---CCcCHHHccCCCCcEEEE
Confidence 998865 567777799999999999988 8888999999999999999887642 111222221234689999
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN-PALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~~~ 329 (410)
+|+||.+|++|+|+||+++ ++++++.+..... ....+++..++.++...|+. . .+++++.++++++
T Consensus 218 ~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~~~ 284 (370)
T 2z61_A 218 NGFSKLYAMTGWRIGYVIS---NDEIIEAILKLQQ----NLFISAPTISQYAALKAFEKET------EREINSMIKEFDR 284 (370)
T ss_dssp EESTTTTTCGGGCCEEEEC---CHHHHHHHHHHHH----HHTSSSCHHHHHHHGGGGSHHH------HHHHHHHHHHHHH
T ss_pred ecChhccCCccceEEEEEE---CHHHHHHHHHHHh----hcccCCCHHHHHHHHHHHhccC------HHHHHHHHHHHHH
Confidence 9999999999999999754 6676666554322 22235667777777666664 2 2345778889999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCC--CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHH
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCE 396 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~ 396 (410)
+++++.+.|+ ++| +.+..+.+++|+|+.+ +. ++.+++++++||.+.|+ + ||+++. ++++++
T Consensus 285 ~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~-~~~~i~ 358 (370)
T 2z61_A 285 RRRLVLKYVK-DFG----WEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYAN-SYENIK 358 (370)
T ss_dssp HHHHHHHHHH-HTT----CBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCS-CHHHHH
T ss_pred HHHHHHHHHH-HcC----CeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeC-CHHHHH
Confidence 9999999998 776 4666677888888766 33 45667764579999874 2 999985 999999
Q ss_pred HHHHHHHHHhh
Q 015283 397 YLADAIIDSYH 407 (410)
Q Consensus 397 ~~~~~l~~~l~ 407 (410)
+++++|+++++
T Consensus 359 ~~~~~l~~~l~ 369 (370)
T 2z61_A 359 EGLERIKEFLN 369 (370)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 47
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5.3e-40 Score=315.85 Aligned_cols=358 Identities=12% Similarity=0.124 Sum_probs=275.8
Q ss_pred cCCCCCCCCCcccchhHhhhc--CCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHH
Q 015283 11 EGVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 88 (410)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~ 88 (410)
.++...+++++.++...+.+. .++++|+|+.|.+ +.+ .++.+.+++ +.+.... ..|++..|..++|+++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~----~~~-~~~~v~~a~-~~l~~~~-~~y~~~~g~~~l~~~la~ 90 (409)
T 2gb3_A 18 DRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQP----DLK-TPEVFFERI-YENKPEV-VYYSHSAGIWELREAFAS 90 (409)
T ss_dssp HHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCC----CSC-CCTHHHHHH-HHTCCSS-CCCCCTTCCHHHHHHHHH
T ss_pred HHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCC----CCC-CCHHHHHHH-HHHhcCC-CCCCCCCCcHHHHHHHHH
Confidence 445667777777766655432 3457899999987 322 268899999 8775543 678888899999999999
Q ss_pred HhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChh
Q 015283 89 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 168 (410)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 168 (410)
++...++..++++++++ ++||++++.+++.. .+.+||+|++++|+|..+...++..|.+++.+++.+++++.+ ++
T Consensus 91 ~~~~~~g~~~~~~~v~~--~~g~t~a~~~~~~~--~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~ 165 (409)
T 2gb3_A 91 YYKRRQRVDVKPENVLV--TNGGSEAILFSFAV--IANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQ 165 (409)
T ss_dssp HHHHTSCCCCCGGGEEE--ESHHHHHHHHHHHH--HCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CT
T ss_pred HHHHHhCCCCCHHHEEE--eCCHHHHHHHHHHH--hCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HH
Confidence 99877777777889999 99999999998443 367999999999999999999999999999998853334545 78
Q ss_pred hHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEE
Q 015283 169 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 248 (410)
Q Consensus 169 ~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (410)
.+++.+.+ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|..+.+.+ ...++ +....++++
T Consensus 166 ~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~---~~~~~--~~~~~~~~i 237 (409)
T 2gb3_A 166 NLESFINE---RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG---EFASA--LSIESDKVV 237 (409)
T ss_dssp TGGGGCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS---CCCCG--GGSCCTTEE
T ss_pred HHHHhhCc---CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC---CCCCc--cccCCCCEE
Confidence 88887764 67777788999999999999999999999999999999999999987642 11121 111235799
Q ss_pred EEecccccccccCCCcceEEEEeCCc-hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 249 VAQSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 249 ~~~S~sK~~~~~G~r~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
+++|+||.+|++|+|+||+++ ++ ++++.+..... ... +++.+++.++...|+.. .+.+++.++++
T Consensus 238 ~~~s~sK~~g~~G~r~G~~~~---~~~~l~~~l~~~~~----~~~-~~~~~~~~a~~~~l~~~------~~~~~~~~~~~ 303 (409)
T 2gb3_A 238 VIDSVSKKFSACGARVGCLIT---RNEELISHAMKLAQ----GRL-APPLLEQIGSVGLLNLD------DSFFDFVRETY 303 (409)
T ss_dssp EEEESTTTTTCGGGCCEEEEC---SCHHHHHHHHHHHH----HSC-CCCHHHHHHHHHHHTCC------HHHHHHHHHHH
T ss_pred EEecchhccCCccceEEEEEE---CcHHHHHHHHHHHh----ccC-CCCHHHHHHHHHHHhcc------HHHHHHHHHHH
Confidence 999999999999999999843 55 76666554322 222 56777777777778653 23456788889
Q ss_pred HHHHHHHHHHhhhccCCCCCccc-ccCCcceeeecCC---CH-HHHHHhhhc-----CcEEEcCC-----------C--e
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGL---NK-AQSDNMTNK-----WHVYMTKD-----------G--R 384 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~---~~-~~~~~ll~~-----~gi~v~~~-----------g--R 384 (410)
+++++++.+.|+ ++| +.+ ..+.+++|+|+.+ +. ++...++++ +||.+.|+ + |
T Consensus 304 ~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iR 378 (409)
T 2gb3_A 304 RERVETVLKKLE-EHG----LKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIR 378 (409)
T ss_dssp HHHHHHHHHHHH-HTT----CCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEE
T ss_pred HHHHHHHHHHHH-HcC----ceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEE
Confidence 999999999998 776 455 5677888888654 33 446667665 49999763 2 9
Q ss_pred EEecCCCcccHHHHHHHHHHHhhh
Q 015283 385 ISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 385 is~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
|+++ .+++++++++++|++++++
T Consensus 379 is~~-~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 379 IACV-LEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp EECC-SCHHHHHHHHHHHHHHHHH
T ss_pred EEeC-CCHHHHHHHHHHHHHHHHH
Confidence 9998 4999999999999998865
No 48
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=6e-40 Score=313.38 Aligned_cols=344 Identities=12% Similarity=0.092 Sum_probs=266.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|||+.|.+ ..+ .++.+.+++.+.+.... ..|++. ..++++++++++...++.++++++|++ ++||++
T Consensus 27 ~~~i~~~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~--~~g~~~ 96 (391)
T 3dzz_A 27 EKELPMWIAEM----DFK-IAPEIMASMEEKLKVAA-FGYESV--PAEYYKAVADWEEIEHRARPKEDWCVF--ASGVVP 96 (391)
T ss_dssp TTCEECCSSCC----SSC-CCHHHHHHHHHHHTTCC-CCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEE--ESCHHH
T ss_pred CCceeccccCC----CCC-CCHHHHHHHHHHHhcCc-CCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEE--CCCHHH
Confidence 47999999976 333 37999999988876543 667654 689999999998877776677899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
++.+++.. .+.+||+|+++.|+|.++...++..|.+++.+++. +..++.+|++.+++.+++ ++++++++++|+||
T Consensus 97 a~~~~~~~--l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~i~~p~np 172 (391)
T 3dzz_A 97 AISAMVRQ--FTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT--PSVRMMVFCNPHNP 172 (391)
T ss_dssp HHHHHHHH--HSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS--TTEEEEEEESSBTT
T ss_pred HHHHHHHH--hCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc--cCceEEEEECCCCC
Confidence 99998443 37799999999999999999999999999999885 344567899999999974 36777788999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEEEEe
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
||.++|.+++++|+++|++||+++|+||+|.++.+.+. ...++..+... .++++++.|+||.+|++|+|+||+ ++
T Consensus 173 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~--~~ 248 (391)
T 3dzz_A 173 IGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE--DITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACA--II 248 (391)
T ss_dssp TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC--CCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEE--EC
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC--CceehhhcCccccCcEEEEEeChhhccccchhheEE--EE
Confidence 99999999999999999999999999999998886431 12222222211 357899999999999999999998 44
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSF 350 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~ 350 (410)
+++++.+.+....... ...+++..++.++...+.+. .+++++.+++++++++++.+.|+ + ++. +.+
T Consensus 249 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~~---~~~ 315 (391)
T 3dzz_A 249 PNPDLRARAEESFFLA---GIGEPNLLAIPAAIAAYEEG------HDWLRELKQVLRDNFAYAREFLA-KEVPE---VKV 315 (391)
T ss_dssp CSHHHHHHHHHHHHHH---TCSSCCTTHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCTT---SEE
T ss_pred CCHHHHHHHHHHHHhh---ccCCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---cEE
Confidence 4578666665543211 22345556666665555432 23357888889999999999998 7 431 567
Q ss_pred ccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 351 ILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 351 ~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..+.++++.|+.+ +. ++...+++++||.+.||. ||+++. +++++++++++|+++++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 316 LDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp CCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHTC
T ss_pred eccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 7788888887643 43 445666656799998752 999986 9999999999999998765
No 49
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=3.3e-39 Score=310.08 Aligned_cols=369 Identities=18% Similarity=0.228 Sum_probs=273.2
Q ss_pred ccCCCCCCCCCcccchhHhhh--cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKV 85 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~a 85 (410)
+.+++...++.+..+.+...+ .++.++|||+.|.+ +..+++ ++.+.+++.+.+... ... |++..|..++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~ 83 (407)
T 2zc0_A 8 AGRANWIKGSALADVMKKASELQKKGVKLISLAAGDP-DPELIP--RAVLGEIAKEVLEKEPKSVM-YTPANGIPELREE 83 (407)
T ss_dssp CGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCC-CTTTSC--HHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHH
T ss_pred hhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCC-CchhCC--HHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHH
Confidence 344555666655554444332 22237899999987 333333 588888888776432 124 8888899999999
Q ss_pred HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCccc
Q 015283 86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 165 (410)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (410)
+++++...+|.++++++|++ |+||++++.++...+ +.+||+|+++.|+|..+...++..|.+++.+++.+ + ++
T Consensus 84 la~~~~~~~g~~~~~~~v~~--t~g~t~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~--~~ 156 (407)
T 2zc0_A 84 LAAFLKKYDHLEVSPENIVI--TIGGTGALDLLGRVL--IDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDN-D--GM 156 (407)
T ss_dssp HHHHHHHHSCCCCCGGGEEE--ESHHHHHHHHHHHHH--CCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-T--EE
T ss_pred HHHHHHHhcCCCCCcceEEE--ecCHHHHHHHHHHHh--cCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCC-C--CC
Confidence 99998665565566789999 999999999984433 67999999999999999999999999999998843 2 38
Q ss_pred ChhhHHHHHh----cCCCCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 166 DFEGMIADIK----AAPGGSFIL-LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 166 d~~~l~~~i~----~~~~~~~~i-i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
|++.+++.++ +. ++++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+.+. ...++..+
T Consensus 157 d~~~l~~~l~~~~~~~-~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~ 233 (407)
T 2zc0_A 157 RVDLLEEKIKELKAKG-QKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGG--DIVPLKAL 233 (407)
T ss_dssp CHHHHHHHHHHHHHTT-CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCS--SCCCGGGG
T ss_pred CHHHHHHHHHhhhccc-CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCC--CCCChhhc
Confidence 9999999887 42 245554 6899999999999999999999999999999999999999876421 11122222
Q ss_pred hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHH-HH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK-AE 319 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~-~~ 319 (410)
+..+++++++|+||.++ +|+|+||+++ ++++++.+.... .....+++.+++.++..+|++.. +. ++
T Consensus 234 -~~~~~~i~~~s~sK~~~-~G~r~G~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~----~~~~~ 300 (407)
T 2zc0_A 234 -DNEGRVIVAGTLSKVLG-TGFRIGWIIA---EGEILKKVLMQK----QPIDFCAPAISQYIALEYLKRGY----FEKYH 300 (407)
T ss_dssp -CSSCCEEEEEESTTTTC-TTSCCEEEEC---CHHHHHHHHHHH----TTTTSSSCHHHHHHHHHHHHTTH----HHHHT
T ss_pred -CCCCCEEEEcccccccC-CCcceEEEec---CHHHHHHHHHHH----HhhcCCCCHHHHHHHHHHHHcCC----chHHH
Confidence 22357899999999999 9999999844 677666554432 22223456777777777777642 23 44
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCC----------C
Q 015283 320 MEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD----------G 383 (410)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~----------g 383 (410)
+++.+++++++++++.+.|+ +. + + +.+..+.+++|+|+.+ +. ++.+.+++++||.+.|+ +
T Consensus 301 ~~~~~~~~~~~~~~l~~~L~-~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~ 376 (407)
T 2zc0_A 301 LEGALLGYKEKRDIMLKALE-NHLP--N-AEFTKPIAGMFVMFFLPEGADGISFANELMEREGVVVVPGKPFYTDESGKN 376 (407)
T ss_dssp TTTHHHHHHHHHHHHHHHHH-HHCT--T-SCBCCCSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhCC--C-CEEecCCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCC
Confidence 67788889999999999998 64 2 1 4555677788888755 33 45667766569999874 2
Q ss_pred --eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 384 --RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 --Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++..+++++++++++|+++++++
T Consensus 377 ~iRis~~~~~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 377 AIRLNFSRPSKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 99998657899999999999998754
No 50
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1e-39 Score=311.74 Aligned_cols=341 Identities=12% Similarity=0.091 Sum_probs=263.3
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
..++|+|+.|.+ +.+ .++.+.+++.+.+.... ..|.+ +..++++++++++.+.++..+++++|++ ++||+
T Consensus 31 ~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~--~~g~~ 100 (391)
T 4dq6_A 31 TNDLLPMWVADM----DFK-AAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIY--SPGVI 100 (391)
T ss_dssp CSCSEECCSSSC----SSC-CCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred CCCceeccccCC----CCC-CCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEE--cCChH
Confidence 357899999976 433 37999999988876543 56654 5689999999998877776667889999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee--cCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY--DPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
+++.++.. ..+.+||+|+++.|+|.++...++..|.+++.+++. +..++.+|++.+++.+++ ++++++++|+
T Consensus 101 ~a~~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~v~i~~p~ 174 (391)
T 4dq6_A 101 PAISLLIN--ELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD----VKLFILCNPH 174 (391)
T ss_dssp HHHHHHHH--HHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT----EEEEEEESSB
T ss_pred HHHHHHHH--HhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc----CCEEEEECCC
Confidence 99999843 336799999999999999999999999999999986 345577999999999874 6777789999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
||||.+++.+++++|+++|++||+++|+||+|.++.+.+.. ..++..+.. ..++++++.|+||.+|++|+|+||+
T Consensus 175 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~-- 250 (391)
T 4dq6_A 175 NPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHK--HIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYV-- 250 (391)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC--CCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEE--
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCC--ccCHHHcCccccCcEEEEEechhhccCcccceEEE--
Confidence 99999999999999999999999999999999998864321 112212211 1357899999999999999999998
Q ss_pred EeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCc
Q 015283 270 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDW 348 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~ 348 (410)
+++++++.+.+....... .+.+++..++.++...+.+. .+++++.+++++++++++.+.|+ + ++. +
T Consensus 251 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~~---~ 317 (391)
T 4dq6_A 251 VLPDEKDYKLLDDAFTRI---DIKRNNCFSLVATEASYNNG------ESWLESFLEYLESNIDFAIKYIN-ENMPK---L 317 (391)
T ss_dssp ECCSHHHHHHHHHHHHHT---TCCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCTT---S
T ss_pred EeCCHHHHHHHHHHHHhh---cCCCCCHHHHHHHHHHHhch------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---C
Confidence 444557666665543311 23356666777666555532 23357888899999999999998 6 331 5
Q ss_pred ccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 349 SFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 349 ~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
.+..+.++++.|+.+ +. ++...+++++||.+.|| + ||+++. +++++++++++|+++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~ 391 (391)
T 4dq6_A 318 KVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNAIN 391 (391)
T ss_dssp EECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHHHC
T ss_pred EecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHhC
Confidence 677788888887644 33 44666766559999875 2 999985 89999999999999863
No 51
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=4.9e-40 Score=313.11 Aligned_cols=357 Identities=17% Similarity=0.130 Sum_probs=267.1
Q ss_pred cccccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHH
Q 015283 7 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 86 (410)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ai 86 (410)
|.++.+++..++..+..+.+.... +++|||+.|.+ ..+ .++.+.+++.+.+.. ...|++..|..++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~l 70 (381)
T 1v2d_A 1 MRLHPRTEAAKESIFPRMSGLAQR---LGAVNLGQGFP----SNP-PPPFLLEAVRRALGR--QDQYAPPAGLPALREAL 70 (381)
T ss_dssp CCCCGGGGGC---CHHHHHHHHHH---HTCEECCCCSC----SSC-CCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHH
T ss_pred CchhhhhhhcCccHHHHHHHHHhc---CCeEEecCCCC----CCC-CCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHH
Confidence 344555666666655444433322 46899999987 222 368999999888755 36788777999999999
Q ss_pred HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec-CCCccc
Q 015283 87 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGL 165 (410)
Q Consensus 87 a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~ 165 (410)
++++.. +++++++ ++||++++.++...+ +.+||+|++++|+|..+...++..|.+++.+++.. .+++.+
T Consensus 71 a~~~~~------~~~~v~~--~~g~~~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 140 (381)
T 1v2d_A 71 AEEFAV------EPESVVV--TSGATEALYVLLQSL--VGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRL 140 (381)
T ss_dssp HHHHTS------CGGGEEE--ESSHHHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEEC
T ss_pred HHhcCC------ChhhEEE--cCChHHHHHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCc
Confidence 999633 2678998 999999999984433 67999999999999999999999999999998741 234778
Q ss_pred ChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 166 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 166 d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
|++.+++.+.+ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ . ...++..+ ..+
T Consensus 141 d~~~l~~~l~~---~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g-~--~~~~~~~~--~~~ 212 (381)
T 1v2d_A 141 DLSALEKALTP---RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYG-E--RPRRLREF--APE 212 (381)
T ss_dssp CHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS-S--CCCCHHHH--CTT
T ss_pred CHHHHHHhcCc---CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccC-C--CCCCHHHh--cCC
Confidence 99999988864 5777777899999999999999999999999999999999999988752 1 11122222 446
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
.++++.|+||.+|++|+|+||+++ ++++++.+..... ....+++...+.++...|+... +.+++++.++
T Consensus 213 ~~~~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~ 281 (381)
T 1v2d_A 213 RTFTVGSAGKRLEATGYRVGWIVG---PKEFMPRLAGMRQ----WTSFSAPTPLQAGVAEALKLAR----REGFYEALRE 281 (381)
T ss_dssp TEEEEEEHHHHTTCGGGCCEEEEC---CTTTHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHHH----HTTHHHHHHH
T ss_pred CEEEEeechhhcCCcccceEEEEe---CHHHHHHHHHHHh----hcccCCCcHHHHHHHHHHhCcc----cHHHHHHHHH
Confidence 899999999999999999999854 7777766654322 1123456666666666655321 1234578889
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCCH-HHHHHhhhcCcEEEcCC----------C--eEEecCCCc
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK-AQSDNMTNKWHVYMTKD----------G--RISLAGLSL 392 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~ 392 (410)
+++++++++.+.|+ +.| +.+..+.+++|+|+.+.. + +.++++++||.+.|+ + ||+++. ++
T Consensus 282 ~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~ 354 (381)
T 1v2d_A 282 GYRRRRDLLAGGLR-AMG----LRVYVPEGTYFLMAELPGWD-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TE 354 (381)
T ss_dssp HHHHHHHHHHHHHH-HTT----CCEECCSBSSEEEEECTTCC-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CH
T ss_pred HHHHHHHHHHHHHH-HCC----CEecCCCcceEEEEecChHh-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CH
Confidence 99999999999998 776 466667778888876521 3 666667789999764 2 999988 99
Q ss_pred ccHHHHHHHHHHHhhhc
Q 015283 393 AKCEYLADAIIDSYHNV 409 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++|++++++.
T Consensus 355 ~~i~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 355 EELHLALERLGRVVNSP 371 (381)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999987653
No 52
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=5.9e-40 Score=317.78 Aligned_cols=334 Identities=15% Similarity=0.174 Sum_probs=252.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
+++|+|++|++ ..+ .++.+.+++.+.+.. .....|++..|.+++++++++++.+ +..+++++|++ ++
T Consensus 56 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~--t~ 126 (432)
T 3ei9_A 56 AQVISLGIGDT----TEP-IPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFV--SD 126 (432)
T ss_dssp CCCEECSSCCC----CSC-CCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEE--ES
T ss_pred CCeEEccCCCC----CCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEE--CC
Confidence 47899999987 222 368888888777642 1225788888999999999999863 44556889999 99
Q ss_pred ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCC------------CccceeeecCCCcccChhhHHHHHhcC
Q 015283 110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV------------PWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
|+++++.++ ...+.+||.|++++|+|.++...++..|. +++.+++.++.++..|++. .
T Consensus 127 G~~~al~~l---~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~- 196 (432)
T 3ei9_A 127 GAKCDISRL---QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------V- 196 (432)
T ss_dssp CHHHHHHHH---HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------C-
T ss_pred ChHHHHHHH---HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh------C-
Confidence 999999874 34467999999999999999988887774 5677777443344455443 1
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++++++++++|+||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++..+....+++++++|+||.+
T Consensus 197 -~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~ 272 (432)
T 3ei9_A 197 -GRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN---PRSIFEIPGAEEVAMETASFSNYA 272 (432)
T ss_dssp -CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC---CSSGGGSTTGGGTEEEEEESHHHH
T ss_pred -CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC---CCChhhcCCCCCeEEEEecchhcc
Confidence 2455666689999999999999999999999999999999999999876521 222222222345789999999999
Q ss_pred cccCCCcceEEEEeCCchh--------HHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDL--------AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
|++|+|+||+++ ++++ .+.+.... ...+.+++.+++.++...+.+.. .+++++.++++++
T Consensus 273 g~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~ 340 (432)
T 3ei9_A 273 GFTGVRLGWTVI---PKKLLYSDGFPVAKDFNRII----CTCFNGASNISQAGALACLTPEG-----LEAMHKVIGFYKE 340 (432)
T ss_dssp CTTTTCCEEEEC---CTTCBCTTSCBHHHHHHHHH----HHSCCCSCHHHHHHHHHHSSHHH-----HHHHHHHHHHHHH
T ss_pred CCcccceEEEEE---ChHHhhcchHHHHHHHHHHh----ccccCCCCHHHHHHHHHHHhccc-----HHHHHHHHHHHHH
Confidence 999999999744 5554 44444322 22344677788888777776432 2346788899999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCC---C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccH
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKC 395 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i 395 (410)
+++++.+.|+ ++| +.+..+..++|+|+.+ + .+++..+++++||.+.|| + |||++. +++++
T Consensus 341 ~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l 414 (432)
T 3ei9_A 341 NTNIIIDTFT-SLG----YDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENI 414 (432)
T ss_dssp HHHHHHHHHH-HTT----CCEEECSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHH
T ss_pred HHHHHHHHHH-HCC----ceecCCCcceEEEEECCCCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHH
Confidence 9999999998 876 4666667788999866 2 356778888779999875 2 999877 99999
Q ss_pred HHHHHHHHHHhhh
Q 015283 396 EYLADAIIDSYHN 408 (410)
Q Consensus 396 ~~~~~~l~~~l~~ 408 (410)
++++++|++-...
T Consensus 415 ~~~l~rl~~~~~~ 427 (432)
T 3ei9_A 415 LEACRRFKQLYKH 427 (432)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhh
Confidence 9999999987543
No 53
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-40 Score=319.24 Aligned_cols=349 Identities=14% Similarity=0.160 Sum_probs=263.8
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCc-ccCCceEEEecC
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQRVATVQGL 109 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~-~~~~~i~~~~t~ 109 (410)
.+++|||+.|.+ +..+++ ++.+.+++.+.+... ....|++..|..++|+++++++...+|.. +++++|++ |+
T Consensus 42 ~~~~idl~~g~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~--t~ 116 (425)
T 1vp4_A 42 DKDAISFGGGVP-DPETFP--RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIF--TV 116 (425)
T ss_dssp STTCEECCCCSC-CGGGSC--HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEE--EE
T ss_pred CCCceeCCCCCC-CcccCC--HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEE--ec
Confidence 467899999987 322333 588888888776432 12578888899999999999985544544 56789999 99
Q ss_pred ChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC-----CCCcEEE
Q 015283 110 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-----PGGSFIL 184 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~~~~i 184 (410)
|+++++.++.. ..+.+||+|++++|+|..+...++..|.+++.+++.+ + ++|++.+++.+++. +.+++++
T Consensus 117 G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~--~~d~~~l~~~l~~~~~~~~~~~~~~v 191 (425)
T 1vp4_A 117 GSQQALDLIGK--LFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLED-D--GMDLNVLERKLSEFDKNGKIKQVKFI 191 (425)
T ss_dssp HHHHHHHHHHH--HHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-T--EECHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred cHHHHHHHHHH--HhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCC-C--CCCHHHHHHHHHhhhhcccCCCceEE
Confidence 99999999843 3367999999999999999999999999999999843 2 48999999888641 1245565
Q ss_pred -EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCC
Q 015283 185 -LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 263 (410)
Q Consensus 185 -i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 263 (410)
++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++. ...++..+ +..+++++++|+||.++ +|+|
T Consensus 192 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~-~~~~~~i~~~s~sK~~~-~G~r 267 (425)
T 1vp4_A 192 YVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE--TVDPIFKI-GGPERVVLLNTFSKVLA-PGLR 267 (425)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSC--CCCCHHHH-HCTTTEEEEEESTTTTC-GGGC
T ss_pred EECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC--CCcCHHHh-CCCCCEEEEeccccccc-cccc
Confidence 5799999999999999999999999999999999999999886421 11223222 33468999999999999 9999
Q ss_pred cceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-
Q 015283 264 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD- 342 (410)
Q Consensus 264 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~- 342 (410)
+||+++ ++++++.+..... ....+++.+++.++...|++.. +.+++++.+++++++++++.+.|+ +.
T Consensus 268 ~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~~l~~~L~-~~~ 335 (425)
T 1vp4_A 268 IGMVAG---SKEFIRKIVQAKQ----SADLCSPAITHRLAARYLERYD----LLEQLKPTIELYRRKRTVMLNALE-EYF 335 (425)
T ss_dssp EEEEEC---CHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHHHSC----HHHHTHHHHHHHHHHHHHHHHHHH-HHS
T ss_pred eEEEee---CHHHHHHHHHHhh----hhcCCCCHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHHHHHHHH-HhC
Confidence 999854 6776666654332 1223457777787777776532 244567888999999999999998 65
Q ss_pred CCCCCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC----------C--eEEecCCCcccHHHHHHHHHHH
Q 015283 343 KSGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 343 g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~----------g--Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
+....+.+..+.+++|+|+.+. .++.+.++++ ||.+.|+ + ||+++..+++++++++++|+++
T Consensus 336 ~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~ 414 (425)
T 1vp4_A 336 SDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREV 414 (425)
T ss_dssp TTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred CCCCceEEecCCccEEEEEEcCCCCCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 1000145566778889887542 3456777775 9999763 2 9999876789999999999998
Q ss_pred hhh
Q 015283 406 YHN 408 (410)
Q Consensus 406 l~~ 408 (410)
+++
T Consensus 415 l~~ 417 (425)
T 1vp4_A 415 VLE 417 (425)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
No 54
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=2.5e-39 Score=310.15 Aligned_cols=344 Identities=12% Similarity=0.097 Sum_probs=261.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|+|+.|.+ +.+ .++.+.+++.+.+.... ..|++. ..++|+++++++...++..+++++|++ |+||++
T Consensus 31 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--t~g~~~ 100 (399)
T 1c7n_A 31 NEVVPLSVADM----EFK-NPPELIEGLKKYLDETV-LGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIIN--TAGVVP 100 (399)
T ss_dssp TTCCCCCSSSC----SSC-CCHHHHHHHHHHHHHCC-CSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEE--ESSHHH
T ss_pred CCceeeeecCC----CCC-CCHHHHHHHHHHHhcCC-CCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEE--cCCHHH
Confidence 46899999886 333 36889999888775433 668653 899999999998665565566789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
++.+++.. .+.+||+|++++|+|.++...++..|.+++.+++.+++ ++.+|++.+++.+++ ++++++++++|+||
T Consensus 101 a~~~~~~~--l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~np 176 (399)
T 1c7n_A 101 AVFNAVRE--FTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD--KNNKALLFCSPHNP 176 (399)
T ss_dssp HHHHHHHH--HCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC--TTEEEEEEESSBTT
T ss_pred HHHHHHHH--hcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc--CCCcEEEEcCCCCC
Confidence 99998443 36799999999999999999999999999998875333 466899999999974 35677778999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcceEEEEe
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
||.++|.+++++|+++|++||+++|+||+|.++.+++. ...++..+.. ..++++++.|+||.+|++|+|+||+ ++
T Consensus 177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~~ 252 (399)
T 1c7n_A 177 VGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY--EHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI--II 252 (399)
T ss_dssp TTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE--EC
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CcccHHHcCccccCcEEEEEeChhhccccchheEEE--EE
Confidence 99999999999999999999999999999999886421 1112212111 1357899999999999999999998 44
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSF 350 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~ 350 (410)
+++++++++....... .+.+++.+++.++...|++. .+++++.+++++++++++.+.|+ + ++. +.+
T Consensus 253 ~~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~~---~~~ 319 (399)
T 1c7n_A 253 KNPDIRERFTKSRDAT---SGMPFTTLGYKACEICYKEC------GKWLDGCIKVIDKNQRIVKDFFE-VNHPE---IKA 319 (399)
T ss_dssp CCHHHHHHHHHHHHHT---TCCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCTT---SBC
T ss_pred CCHHHHHHHHHHHhhc---ccCCCCHHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hhCCC---CeE
Confidence 4466666665533211 12356777777776666532 23457788889999999999998 7 531 466
Q ss_pred ccCCcceeeecCC-----CHH-HHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 351 ILRQIGMFSFTGL-----NKA-QSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 351 ~~~~~~~~~~~~~-----~~~-~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..+.++++.|+.+ +.. +...+++++||.+.|+ + ||+++. +++++++++++|+++++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 393 (399)
T 1c7n_A 320 PLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDL 393 (399)
T ss_dssp CCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred ecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHHHH
Confidence 6778888877644 333 4566665679999875 2 999987 6889999999999988754
No 55
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.3e-39 Score=314.99 Aligned_cols=346 Identities=14% Similarity=0.096 Sum_probs=254.9
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHH--HHhhcc--CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAE--NLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~--~~~~~~--~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
.+..|||+.|.| +... .+.++.+.++. .+.+.. .....|++..|.+++|+++++++. +++++|++ |
T Consensus 32 ~~~~i~~~~G~p-~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~------~~~~~i~~--t 101 (427)
T 3ppl_A 32 KNLKLDLTRGKP-SSEQ-LDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLG------VPVEQVLA--G 101 (427)
T ss_dssp TCCCEECCCCSC-CHHH-HHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHT------SCGGGEEE--C
T ss_pred CCceEecCCCCC-ChHH-CCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhC------CCcceEEE--e
Confidence 356899999988 1111 11123566665 554433 124789888999999999999972 34789999 9
Q ss_pred CChhhHH--HHHHHHHHHhC--C----------CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283 109 LSGTGSL--RLAAALIERYF--P----------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 174 (410)
Q Consensus 109 ~ggt~a~--~~~~~~~~~~~--~----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 174 (410)
+|+++++ +++...+ +. + ||+|++++|+|..+...++..|.+++.+|+.+ + ++|++.+++.+
T Consensus 102 ~G~~~al~~~~~~~~l--~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~-~--g~d~~~l~~~l 176 (427)
T 3ppl_A 102 DASSLNIMFDVISWSY--IFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNE-D--GPDMDAVEELV 176 (427)
T ss_dssp SSCHHHHHHHHHHHHH--HHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEET-T--EECHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHH--hccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCC-C--CCCHHHHHHHH
Confidence 9999999 4653333 33 5 89999999999999999999999999999853 2 48999999998
Q ss_pred hcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHH-HHcCCcccccccCCCCCCCCCCCchhHhHHH---hhcCCcEEE
Q 015283 175 KAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVI-QEKNHIPFFDVAYQGFASGSLDNDASSVRLF---ATRGMELLV 249 (410)
Q Consensus 175 ~~~~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~~-~~~~~~li~Deay~~~~~~~~~~~~~~~~~~---~~~~~~~i~ 249 (410)
+. +++++++ .++||||||.+++.+++++|+++| ++||++||+||+|..+.+.+......++..+ .+..+++++
T Consensus 177 ~~--~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 254 (427)
T 3ppl_A 177 KN--PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWA 254 (427)
T ss_dssp TS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEE
T ss_pred hc--CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEE
Confidence 53 3555655 558899999999999999999999 9999999999999997654222111122222 124568999
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN-PALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~~ 328 (410)
++||||. +++|+|+||++. ++++++.+..... ....+++.+.|.++..++.+ +. +.+++++.++.++
T Consensus 255 ~~S~SK~-~~~G~r~G~~~~---~~~l~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~ 322 (427)
T 3ppl_A 255 FTSTSKI-TLAGAGVSFFLT---SAENRKWYTGHAG----IRGIGPNKVNQLAHARYFGDAEG----VRAVMRKHAASLA 322 (427)
T ss_dssp EEESTTT-SCTTSSCEEEEC---CHHHHHHHHHHHH----HHCSCCCHHHHHHHHHHHCSHHH----HHHHHHHHHHHHH
T ss_pred Eechhhc-cCcCccEEEEEc---CHHHHHHHHHHhh----cccCCCCHHHHHHHHHHHhChhh----HHHHHHHHHHHHH
Confidence 9999999 679999999744 7776666554332 22346788888888888887 33 3455677778888
Q ss_pred HHHHHHHHHhhhc-cCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC----------C----eEEecCC
Q 015283 329 NVRQKLFDSLSAK-DKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD----------G----RISLAGL 390 (410)
Q Consensus 329 ~~~~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~----------g----Ris~~~~ 390 (410)
++++.+.+.|. + ++..+.+.+..+.+|+|+|+.+. .+.+.+.+.++||.+.|+ + ||+++..
T Consensus 323 ~~~~~l~~~L~-~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~ 401 (427)
T 3ppl_A 323 PKFNKVLEILD-SRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP 401 (427)
T ss_dssp HHHHHHHHHHH-HHHGGGTCCEECCCSBSSCEEEECSTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS
T ss_pred HHHHHHHHHHH-HhcCCCCceEEeCCCccEEEEEECCcchHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC
Confidence 88887777775 3 21000145667888999998663 444555556679999982 1 9999876
Q ss_pred CcccHHHHHHHHHHHhhh
Q 015283 391 SLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~ 408 (410)
+++++++++++|++++++
T Consensus 402 ~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 402 PVEELEVAMDGVATCVLL 419 (427)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 889999999999998865
No 56
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=8.7e-40 Score=313.43 Aligned_cols=359 Identities=15% Similarity=0.135 Sum_probs=253.6
Q ss_pred ccccCCCCCCC-CCcccchhHhhh----cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc----CCCccCcCCcc
Q 015283 8 SRFEGVTMAPP-DPILGVSEAFKA----DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEG 78 (410)
Q Consensus 8 ~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g 78 (410)
+..+++...++ .++..+.++... ..++++|+|+.|.+ ..+ .++.+.+++.+.+.. .....|.+..|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g 76 (400)
T 3asa_A 2 KRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDT----TQP-LNASVAEAFASSIARLSSPTTCRGYGPDFG 76 (400)
T ss_dssp CCCHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCC----CCC-CCHHHHHHHHHHHHHHTSSSCCCCCCCTTC
T ss_pred ccchhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCC----CCC-CCHHHHHHHHHHHhcccccccccCCCCCCC
Confidence 34445555555 223333333332 23467899999986 322 367888887776532 11356877789
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC-ccceee
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP-WSEYRY 157 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~ 157 (410)
.+++|+++++++. .+. +++++|++ ++|+++++.++. ..+.+||+|++++|+|..+...++..|.+ ++.+++
T Consensus 77 ~~~lr~~la~~l~--~g~-~~~~~v~~--~~G~~~al~~~~---~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 148 (400)
T 3asa_A 77 LPALRQKLSEDFY--RGF-VDAKEIFI--SDGAKVDLFRLL---SFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPC 148 (400)
T ss_dssp CHHHHHHHHHTTS--TTS-SCGGGEEE--ESCHHHHHHHHH---HHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEEC
T ss_pred CHHHHHHHHHHHH--cCC-CCHHHEEE--ccChHHHHHHHH---HHcCCCCEEEECCCCcHHHHHHHHHcCCcceEeccc
Confidence 9999999999964 343 45789999 999999999863 34579999999999999999999999998 888887
Q ss_pred ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh
Q 015283 158 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 237 (410)
Q Consensus 158 ~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 237 (410)
.++.++..|++.+ ++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ....+
T Consensus 149 ~~~~~~~~~l~~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~ 218 (400)
T 3asa_A 149 LQENAFFPEFPED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPS--LPKSI 218 (400)
T ss_dssp CGGGTTCCCCCTT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTT--SCSSG
T ss_pred chhcCcccChhhc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCC--CCCch
Confidence 5333344444321 2445566679999999999999999999999999999999999998875421 11112
Q ss_pred HHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh-------HHHHHHHHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283 238 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL-------AARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 238 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
..+....+++++++|+||.+|++|+|+||+++ ++++ ++.+..... ...+.+++.+++.++..+|++.
T Consensus 219 ~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~ 292 (400)
T 3asa_A 219 FEIPDARFCAIEINSFSKPLGFAGIRLGWTVI---PQELTYADGHFVIQDWERFL---STTFNGASIPAQEAGVAGLSIL 292 (400)
T ss_dssp GGSTTGGGTEEEEEECCGGGTTTTCCCEEEEC---CTTCBCTTSCBHHHHHHHHH---HHHCCCCCHHHHHHHHHHHHHT
T ss_pred hhCCCCCCceEEEecchhhcCCcchheeEEee---ChhhccchhhhHHHHHHHHh---ccCccCCChHHHHHHHHHhCcH
Confidence 11111234689999999999999999999844 5565 455433221 1123356777777776666543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-CC-----HHHHHHhhhcCcEEEcCC--
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-LN-----KAQSDNMTNKWHVYMTKD-- 382 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~ll~~~gi~v~~~-- 382 (410)
++++.+++++++++++.+.|+ +.| +.+..+.+++|+|+. +. .+++.++++++||.+.||
T Consensus 293 --------~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~ 359 (400)
T 3asa_A 293 --------PQLEAIHYYRENSDLLRKALL-ATG----FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIG 359 (400)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHH-HTT----CEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGG
T ss_pred --------HHHHHHHHHHHHHHHHHHHHH-HCC----CeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhH
Confidence 135778888999999999998 776 466666678888876 42 246677777679999875
Q ss_pred ------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 383 ------G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 383 ------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ ||++.. +++++++++++|++++++.
T Consensus 360 f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 360 FGRSGSGFVRFSSLG-KREDILAACERLQMAPALQ 393 (400)
T ss_dssp GCGGGTTCEEEECCS-CHHHHHHHHHHHHC-----
T ss_pred hCCCCCCEEEEEeeC-CHHHHHHHHHHHHHHHHhh
Confidence 2 999655 8999999999999988764
No 57
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=3.8e-39 Score=311.03 Aligned_cols=343 Identities=14% Similarity=0.080 Sum_probs=266.8
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
..++|+|+.|++ ..+ .+|.+.+++.+.+.... ..|.+. ..++++++++++...++..+++++|++ ++|++
T Consensus 60 g~~~i~~~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~--~~g~~ 129 (421)
T 3l8a_A 60 NPELLQMWVADM----DFL-PVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILF--IDGVV 129 (421)
T ss_dssp CTTCEECCSSCC----CSC-CCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred CCCeeecccCCC----CCC-CCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEE--cCCHH
Confidence 457899999976 333 37899999988876543 567543 379999999998877776677899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++.+++.+ +.+||+|+++.|+|.++...++..|.+++.+|+. ....+.+|++.+++.+++ ++++++++++|+|
T Consensus 130 ea~~~a~~~~--~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~--~~~~~vil~~p~n 205 (421)
T 3l8a_A 130 PAISIALQAF--SEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID--NNVKIYLLCSPHN 205 (421)
T ss_dssp HHHHHHHHHH--SCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH--TTEEEEEEESSBT
T ss_pred HHHHHHHHHh--cCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc--cCCeEEEECCCCC
Confidence 9999985443 6799999999999999999999999999999885 345577899999999984 3678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCcceEEEE
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
|||.+++.+++++|+++|++||+++|+||+|.++.+.+.. ..++..+. +..++++++.|+||.+|++|+|+||+ +
T Consensus 206 ptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~--~ 281 (421)
T 3l8a_A 206 PGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT--HHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA--I 281 (421)
T ss_dssp TTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEE--E
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC--CccHHHcCchhcCcEEEEEeChhhccCchhheEeE--E
Confidence 9999999999999999999999999999999999865321 11221221 22468899999999999999999998 4
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
++++++.+.+...... ..+.+++.+++.++...++.. .+.+++.+++++++++++.+.|+ +.+ + +..
T Consensus 282 ~~~~~l~~~~~~~~~~---~~~~~~n~~~~~a~~aal~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~--~-i~~ 348 (421)
T 3l8a_A 282 IQNESLRRKFQYRQLA---NNQHEVPTVGMIATQAAFQYG------KPWLEELKTVIEGNIKLVIKELE-AKT--K-IKV 348 (421)
T ss_dssp CCSHHHHHHHHHHHHH---TTCSCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHC--S-CEE
T ss_pred cCCHHHHHHHHHHHHh---cccCCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHH-hCC--C-ceE
Confidence 4447866666543321 123356677777766665532 23357888899999999999998 762 1 567
Q ss_pred ccCCcceeeecCC-----C-HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 351 ILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 351 ~~~~~~~~~~~~~-----~-~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
..+.++++.|+.+ + .++...+++++||.+.+| + ||+++. +++++++++++|+++++
T Consensus 349 ~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 349 MEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT-PKNTVQEALSRIISVFG 420 (421)
T ss_dssp ECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred eCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 7888888888754 2 355677777789999874 2 999986 99999999999999875
No 58
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.8e-38 Score=304.03 Aligned_cols=361 Identities=17% Similarity=0.191 Sum_probs=265.7
Q ss_pred ccCCCCCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHH
Q 015283 10 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTA 87 (410)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia 87 (410)
+.+.....+..+..+. ....++++|||+.|.+ +..+++ ++.+.+++.+.+... ....|++..|..++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~---~~~~~~~~i~l~~g~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la 84 (397)
T 2zyj_A 11 GKGAGRIQASTIRELL---KLTQRPGILSFAGGLP-APELFP--KEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVA 84 (397)
T ss_dssp CGGGGGCCCCHHHHHH---HHHTSTTCEEESSCCC-CGGGCC--HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHH
T ss_pred hhhhcccCchHHHHHH---hhccCCCceecCCCCC-CchhCC--HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHH
Confidence 3444444444333322 2233467899999986 222222 578888887776431 1256877789999999999
Q ss_pred HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccCh
Q 015283 88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 167 (410)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 167 (410)
+++. +++++|++ ++|+++++.++... .+.+||+|++++|+|..+...++..|.+++.+++.+ + ++|+
T Consensus 85 ~~~g------~~~~~v~~--~~g~~~al~~~~~~--~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~--~~d~ 151 (397)
T 2zyj_A 85 EWIG------VRPEEVLI--TTGSQQALDLVGKV--FLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE-E--GPDL 151 (397)
T ss_dssp HHHT------SCGGGEEE--ESHHHHHHHHHHHH--HCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET-T--EECH
T ss_pred HHhC------CChhhEEE--eccHHHHHHHHHHH--hCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCC-C--CCCH
Confidence 9972 23678999 99999999998443 367999999999999999999999999999998843 2 3899
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc--CC
Q 015283 168 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR--GM 245 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~--~~ 245 (410)
+.+++.+++. +...++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+. ...++..+... .+
T Consensus 152 ~~l~~~l~~~-~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~ 228 (397)
T 2zyj_A 152 DALEEVLKRE-RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA--RLPSLFELAREAGYP 228 (397)
T ss_dssp HHHHHHHHHC-CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC--CCCCHHHHHHHHTCC
T ss_pred HHHHHHHhhc-CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC--CCCchhhhCcccCCC
Confidence 9999998752 1233346799999999999999999999999999999999999999886421 11222232222 15
Q ss_pred cEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
++++++|+||.++ +|+|+||+++ ++++++.+..... ....+++.+++.++...|++.. | +++++.++
T Consensus 229 ~~i~~~s~sK~~~-~G~r~G~~~~---~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~~l~~~~----~-~~~~~~~~ 295 (397)
T 2zyj_A 229 GVIYLGSFSKVLS-PGLRVAFAVA---HPEALQKLVQAKQ----GADLHTPMLNQMLVHELLKEGF----S-ERLERVRR 295 (397)
T ss_dssp CEEEEEESTTTTC-GGGCCEEEEC---CHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHTTTH----H-HHHHHHHH
T ss_pred eEEEEeccccccc-ccceeEEEec---CHHHHHHHHHHHH----hhcCCCCHHHHHHHHHHHHhCC----H-HHHHHHHH
Confidence 7899999999999 9999999854 6776666654322 1223457778888888888653 2 45678889
Q ss_pred HHHHHHHHHHHHhhhcc-CCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCC----------C--eEEe
Q 015283 326 RIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD----------G--RISL 387 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~----------g--Ris~ 387 (410)
+++++++++.+.|+ +. + ..+.+..+.+++|+|+.+ +. ++.+.++++ ||.+.|+ + ||++
T Consensus 296 ~~~~~~~~l~~~L~-~~~~--~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~ 371 (397)
T 2zyj_A 296 VYREKAQAMLHALD-REVP--KEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSY 371 (397)
T ss_dssp HHHHHHHHHHHHHH-HHSC--TTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEEC
T ss_pred HHHHHHHHHHHHHH-HHCC--CCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEc
Confidence 99999999999998 64 2 014555677888888754 33 456666664 9999874 2 9999
Q ss_pred cCCCcccHHHHHHHHHHHhhhc
Q 015283 388 AGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 388 ~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+..+++++++++++|+++++++
T Consensus 372 ~~~~~~~i~~~~~~l~~~l~~~ 393 (397)
T 2zyj_A 372 ATLDREGIAEGVRRLGRALKGL 393 (397)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 8767899999999999988653
No 59
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.3e-38 Score=298.71 Aligned_cols=323 Identities=12% Similarity=0.054 Sum_probs=252.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+++|+|+.|++ ..+ .++.+.+++.+.+.. ...|++..+ .++|+++++++. +++++|++ ++||++
T Consensus 30 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~~------~~~~~v~~--~~g~~~ 93 (365)
T 3get_A 30 KEVIKLASNEN----PFG-TPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKYK------VQNENIII--GAGSDQ 93 (365)
T ss_dssp SCCEECSSCCC----TTC-SCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHHT------CCGGGEEE--ESSHHH
T ss_pred CceEEecCCCC----CCC-CCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHhC------CCcceEEE--CCCHHH
Confidence 57899999987 222 378999999888763 367866555 899999999973 23689999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.++.. ..+.+||+|+++.|+|..+...++..|.+++.+++ +.+++ +|++++++.++. +++++++++|+|||
T Consensus 94 a~~~~~~--~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~---~~~~v~~~~p~npt 166 (365)
T 3get_A 94 VIEFAIH--SKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKD---EIKLIFLCLPNNPL 166 (365)
T ss_dssp HHHHHHH--HHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTT---TEEEEEEESSCTTT
T ss_pred HHHHHHH--HHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCC---CCCEEEEcCCCCCC
Confidence 9999843 33679999999999999999999999999999987 45667 999999999874 67788889999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCC--CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|.+++.+++++|+++| ++|+++|+||+|.++.+ .+. ...+........+++++++|+||.+|++|+|+||+++
T Consensus 167 G~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-- 241 (365)
T 3get_A 167 GECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSK--KHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA-- 241 (365)
T ss_dssp CCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGG--GCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE--
T ss_pred CCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCc--ccccHhHHhccCCCEEEEeecchHhcCcchheEEEEc--
Confidence 9999999999999999 57999999999987763 211 1112223344567899999999999999999999855
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++++... .. . .+++..++.++...|++. +++++.+++++++++++.+.|+ +.+ +.+.
T Consensus 242 -~~~~~~~~~~~----~~-~-~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~-~~g----~~~~ 302 (365)
T 3get_A 242 -NANIISAFYKL----RA-P-FNVSNLALKAAVAAMDDD-------EFTEKTLENNFSQMELYKEFAK-KHN----IKII 302 (365)
T ss_dssp -CHHHHHHHHHH----SC-T-TCSCHHHHHHHHHHHTCH-------HHHHHHHHHHHHHHHHHHHHHH-HTT----CEEC
T ss_pred -CHHHHHHHHHh----cC-C-CCcCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHH-hCC----CEEC
Confidence 88866555442 22 2 247777888888888864 2357888899999999999998 876 4555
Q ss_pred cCCcceeeecCC---CHHH-HHHhhhcCcEEEcCCC-------eEEecCCCcccHHHHHHHHHHHhh
Q 015283 352 LRQIGMFSFTGL---NKAQ-SDNMTNKWHVYMTKDG-------RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 352 ~~~~~~~~~~~~---~~~~-~~~ll~~~gi~v~~~g-------Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
++. +.|+|+.+ +.+. ...+. ++||.+.++. ||+++ ++++++++++.|+++++
T Consensus 303 ~~~-~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~iRis~~--~~~~i~~l~~~l~~~l~ 365 (365)
T 3get_A 303 DSY-TNFITYFFDEKNSTDLSEKLL-KKGIIIRNLKSYGLNAIRITIG--TSYENEKFFTEFDKILR 365 (365)
T ss_dssp CCS-SSEEEEECSSSCHHHHHHHHH-TTTEECEECGGGTCSEEEEECC--CHHHHHHHHHHHHHHHC
T ss_pred CCC-CeEEEEECCCCCHHHHHHHHH-HCCEEEEECccCCCCEEEEEcC--CHHHHHHHHHHHHHHhC
Confidence 444 55677755 4444 45555 4699998863 99985 78999999999998863
No 60
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=4.4e-38 Score=296.51 Aligned_cols=325 Identities=17% Similarity=0.210 Sum_probs=254.5
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
.+.+|+|+.|.+ ..+ .++.+.+++.+.+.. ...| +..+.+++|+++++++. +++++|++ ++||+
T Consensus 15 ~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~~------~~~~~i~~--~~g~~ 78 (354)
T 3ly1_A 15 TDNPIRINFNEN----PLG-MSPKAQAAARDAVVK--ANRY-AKNEILMLGNKLAAHHQ------VEAPSILL--TAGSS 78 (354)
T ss_dssp SSSCEECSSCCC----SSC-CCHHHHHHHHHTGGG--TTSC-CHHHHHHHHHHHHHHTT------SCGGGEEE--ESHHH
T ss_pred CCceEEccCCCC----CCC-CCHHHHHHHHHHHhh--CcCC-CCCchHHHHHHHHHHhC------CChHHEEE--eCChH
Confidence 467899999986 333 379999999888764 3667 56788999999999963 23689999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+++.++... .+.+||+|+++.|+|.++...++..|.+++.+++. .++.+|++.+++.+++. ++++++++++|+||
T Consensus 79 ~a~~~~~~~--l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~~-~~~~~v~l~~p~np 153 (354)
T 3ly1_A 79 EGIRAAIEA--YASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKML--DNWAFDIEGLKAAVAAY-SGPSIVYLVNPNNP 153 (354)
T ss_dssp HHHHHHHHH--HCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHHHTC-SSCEEEEEESSCTT
T ss_pred HHHHHHHHH--HhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhccC-CCCCEEEEeCCCCC
Confidence 999998433 36799999999999999999999999999999883 35889999999999831 26777777899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC-CcEEEEecccccccccCCCcceEEEEe
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG-MELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
||.+++.+++++|+++| ++|+++|+||+|.++.+.+. ..+........ +++++++|+||.+|++|+|+||+++
T Consensus 154 tG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-- 227 (354)
T 3ly1_A 154 TGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPR---FRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA-- 227 (354)
T ss_dssp TCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTT---CCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC--
T ss_pred cCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccc---cCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec--
Confidence 99999999999999999 89999999999998876431 11222333444 7899999999999999999999744
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
+++++++ +...... .+++..++.++...|++. +++++.+++++++++++.+.|+ +.+ +.+.
T Consensus 228 -~~~~~~~----~~~~~~~--~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~-~~~----~~~~ 288 (354)
T 3ly1_A 228 -HPTVIAL----MGRYVAG--EKINFSGVDAALASMNDS-------AFITYSKKSNDVSRQILLKALE-DLK----LPYL 288 (354)
T ss_dssp -CHHHHHH----HGGGTTC--SCCCHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHHHHHH-HHT----CCBC
T ss_pred -CHHHHHH----HHHhcCC--CCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHH-HCC----CeEC
Confidence 7774444 4433332 367777788888888864 2356888899999999999998 776 3444
Q ss_pred cCCcceeeecCC--CHHH-HHHhhhcCcEEEcCC------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 352 LRQIGMFSFTGL--NKAQ-SDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 352 ~~~~~~~~~~~~--~~~~-~~~ll~~~gi~v~~~------g--Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
++ .+.|+|+.+ +.+. ...+. ++||.+. + + ||+++ +++++++++++|++++++
T Consensus 289 ~~-~~~~~~~~~~~~~~~~~~~l~-~~gi~v~-g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 289 PS-EGNFVFHQLVVPLKDYQTHMA-DAGVLIG-RAFPPADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp CC-CSSEEEEECSSCHHHHHHHHH-HTTEECC-CCCTTCTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred CC-CceEEEEECCCCHHHHHHHHH-HCCEEEe-ecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 44 566788766 3444 45555 4799988 3 2 99985 789999999999999875
No 61
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.2e-38 Score=307.59 Aligned_cols=343 Identities=16% Similarity=0.098 Sum_probs=252.0
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhh--ccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLML--ERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
.+|||+.|.| +....+ .++.+.+++.+.. ... ....|++..|.+++|+++++++. +++++|++ |+|+
T Consensus 33 ~~i~l~~g~~-~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~------~~~~~i~~--t~G~ 102 (422)
T 3d6k_A 33 LSLDLTRGKP-SAEQLD-LSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALG------LPADLVVA--QDGS 102 (422)
T ss_dssp CCEECCCCSC-CHHHHH-TTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHT------CCGGGEEE--CSSC
T ss_pred CeEeCCCCCC-ChhhCC-CcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhC------CChhHEEE--ecch
Confidence 5899999997 111123 2556777665542 121 23689999999999999999973 34789999 9999
Q ss_pred hhHH--HHHHHHHHHhCC------------CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC
Q 015283 112 TGSL--RLAAALIERYFP------------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 177 (410)
Q Consensus 112 t~a~--~~~~~~~~~~~~------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 177 (410)
++++ .++...+ ..+ ||+|++++|+|..|...++..|++++.+++.+ + ++|++.+++.+++
T Consensus 103 ~~al~l~~~~~~l--~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~--g~d~~~l~~~l~~- 176 (422)
T 3d6k_A 103 SLNIMFDLISWSY--TWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTD-E--GPDMGVVRELVKD- 176 (422)
T ss_dssp HHHHHHHHHHHHH--HHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEET-T--EECHHHHHHHHTS-
T ss_pred HHHHHHHHHHHHh--cCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCC-C--CCCHHHHHHHHhc-
Confidence 9987 4543333 224 34799999999999999999999999999853 2 4899999999864
Q ss_pred CCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHH-HcCCcccccccCCC--CCCCCCCCchhHhHHH---hhcCCcEEEE
Q 015283 178 PGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVAYQG--FASGSLDNDASSVRLF---ATRGMELLVA 250 (410)
Q Consensus 178 ~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~~~-~~~~~li~Deay~~--~~~~~~~~~~~~~~~~---~~~~~~~i~~ 250 (410)
.++++++ +++||||||.+++.+++++|+++|+ +||++||+||+|.. |...+ ....++..+ .+..++++++
T Consensus 177 -~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~ 253 (422)
T 3d6k_A 177 -PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEF--PIVHNVIEFAQAAGNPNRFWFM 253 (422)
T ss_dssp -TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC--CCCCCHHHHHHHTTCTTCEEEE
T ss_pred -CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCC--CCCcChhhHhhccCCCCcEEEE
Confidence 2455555 7999999999999999999999999 99999999999986 44321 111122121 2345689999
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
+||||. +++|+|+||+++ ++++++.+..... ....+++.++|.++..+|++. +.|.+++++.++.++++
T Consensus 254 ~S~SK~-~~~GlriG~~~~---~~~l~~~l~~~~~----~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~ 322 (422)
T 3d6k_A 254 SSTSKI-THAGSGVSFFAS---SKENIEWYASHAN----VRGIGPNKLNQLAHAQFFGDV---AGLKAHMLKHAASLAPK 322 (422)
T ss_dssp EESTTT-SCTTSSCEEEEC---CHHHHHHHHHHHH----HHCSCCCHHHHHHHHHHHCSH---HHHHHHHHHHHHHHHHH
T ss_pred cChhhh-cCcccceEEEEe---CHHHHHHHHHHHH----hhcCCCCHHHHHHHHHHHhCc---chHHHHHHHHHHHHHHH
Confidence 999999 679999999854 7776666554332 223457788888888888872 12456677888888888
Q ss_pred HHHHHHHhhhcc-CCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCC------------C--eEEecCCCc
Q 015283 331 RQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKD------------G--RISLAGLSL 392 (410)
Q Consensus 331 ~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~------------g--Ris~~~~~~ 392 (410)
++.+.+.|. +. +..+.+.+..+.+++|+|+.+ +.+.+.++++++||.+.|+ + |||++..++
T Consensus 323 ~~~l~~~L~-~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~ 401 (422)
T 3d6k_A 323 FERVLEILD-SRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPV 401 (422)
T ss_dssp HHHHHHHHH-HHHGGGTCEEECCCSBSSCEEEEESTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCH
T ss_pred HHHHHHHHH-HhcCcCCceEEeCCCcceEEEEECCCCCHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCH
Confidence 888887776 42 100013555678899999865 2455556666789999882 2 999985589
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
+++++++++|++++++
T Consensus 402 e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 402 AELEVAMDGFATCVLM 417 (422)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998865
No 62
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.2e-39 Score=322.43 Aligned_cols=342 Identities=13% Similarity=0.094 Sum_probs=257.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCC-CC-Cccc-CCceEEEecCC
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGA-DN-SVLK-EQRVATVQGLS 110 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~-~~-~~~~-~~~i~~~~t~g 110 (410)
.+|+|+.|.+ +.+ ++.+.+++.+.+.. ..|. +..|.+++|+++++++... .+ ..++ +++|++ |+|
T Consensus 104 ~~i~l~~g~~----~~~--~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~--t~G 172 (533)
T 3f6t_A 104 DAVNYCHTEL----GLN--RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFP--TEG 172 (533)
T ss_dssp HHHHHHHHTT----CCC--HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEE--EEH
T ss_pred hheeccCCCC----CcC--CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEE--ECC
Confidence 3689999987 433 45565555555433 2344 7889999999999998544 23 3343 468999 999
Q ss_pred hhhHHHHHHHHHH---HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeec--CCCcccChhhHHHHHhcCCCCcEEEE
Q 015283 111 GTGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD--PKTVGLDFEGMIADIKAAPGGSFILL 185 (410)
Q Consensus 111 gt~a~~~~~~~~~---~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~i~~~~~~~~~ii 185 (410)
+++++..++..+. .+.+||+|++++|+|.++...++..|.+++.+++.. ++++.+|++.+++.+.+ ++++++
T Consensus 173 ~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~---~~k~v~ 249 (533)
T 3f6t_A 173 GTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP---SIKALI 249 (533)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT---TEEEEE
T ss_pred HHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC---CCeEEE
Confidence 9999999854321 356999999999999999999999999988888754 56788999999998864 677778
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHH-HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~-~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 264 (410)
+++|+||||.+++.+++++|+++|+ +||+++|+||+|.++.++. . ++... ..+++++++||||.+|++|+|+
T Consensus 250 l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~--~---~~~~~--~~~~~i~~~S~SK~~g~~G~Ri 322 (533)
T 3f6t_A 250 VVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF--K---SIYSV--VPYNTMLVYSYSKLFGCTGWRL 322 (533)
T ss_dssp EESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC--C---CHHHH--SGGGEEEEEESHHHHTCGGGCE
T ss_pred EeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc--c---CHhhc--CCCCEEEEecCcccCCCcccce
Confidence 7899999999999999999999999 6899999999999887531 1 11121 2358999999999999999999
Q ss_pred ceEEEEeCCchhHHHHHHHH--------------------------------HhhccCcccCCChhHHHH----HHHHhC
Q 015283 265 GAMNVVCSSSDLAARVKSQL--------------------------------KRLARPMYSNPPVHGARI----VANVVG 308 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~----a~~~l~ 308 (410)
||++ ++++++++++...+ .......+.+++...|.+ +...|.
T Consensus 323 G~l~--~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~ 400 (533)
T 3f6t_A 323 GVIA--LNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLL 400 (533)
T ss_dssp EEEE--EESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHT
T ss_pred EEEE--ECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHh
Confidence 9984 44554444443321 223333344666666666 334453
Q ss_pred C----hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC--------------------
Q 015283 309 N----PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-------------------- 364 (410)
Q Consensus 309 ~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-------------------- 364 (410)
+ .. +.+++++.++.++++++++.+.|. ++ +.+..+.+++|+|+++.
T Consensus 401 ~~~g~~~----~~~~~~~~~~~~~~r~~~l~~~L~--~~----~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~ 470 (533)
T 3f6t_A 401 TSTNGGS----DDPYIDIARKLVSERYDQLHDAMQ--AP----KDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFE 470 (533)
T ss_dssp TCBGGGT----BCHHHHHHHHHHHHHHHHHHHHHT--CC----CCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCC
T ss_pred hhccccc----hHHHHHHHHHHHHHHHHHHHHhcC--CC----ccccCCCceEEEEEehHhhhhhccchHHHHHhhccCC
Confidence 1 11 245668889999999999999885 44 46677889999987542
Q ss_pred -HHHHHHhhhcCcEEEcCC-------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 365 -KAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 365 -~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+++.++++++||.+.|| + |||++.++++++++++++|+++++++
T Consensus 471 ~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~ 525 (533)
T 3f6t_A 471 QVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEY 525 (533)
T ss_dssp HHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHH
Confidence 255678887789999986 2 99998779999999999999998653
No 63
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=3.3e-38 Score=301.40 Aligned_cols=343 Identities=16% Similarity=0.081 Sum_probs=256.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHH-HHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAA-FNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~-lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
+++|+|+.|.+ ..+ .++.+.+++.+.+.... ..|++. ..+ +|+++++++...++..+++++|++ ++|++
T Consensus 28 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~-~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~--t~g~~ 97 (390)
T 1d2f_A 28 ADLLPFTISDM----DFA-TAPCIIEALNQRLMHGV-FGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVY--GPSVI 97 (390)
T ss_dssp --CEECCSSSC----SSC-CCHHHHHHHHHHHTTCC-CCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEE--ESCHH
T ss_pred CCeeEeeecCC----CCC-CCHHHHHHHHHHHhCCC-CCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEE--cCCHH
Confidence 36899999886 333 37899999988875433 668654 678 999999998766676667889999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
+++.++.. ..+.+||+|+++.|+|.++...++..|.+++.+|+.+++ ++.+|++.+++.+++ .+++++++++|+|
T Consensus 98 ~al~~~~~--~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~l~~p~n 173 (390)
T 1d2f_A 98 YMVSELIR--QWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK--PECKIMLLCSPQN 173 (390)
T ss_dssp HHHHHHHH--HSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS--TTEEEEEEESSCT
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc--CCCeEEEEeCCCC
Confidence 99999843 335699999999999999999999999999999885442 467899999999874 2566777789999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+++.+++++|+++|++||+++|+||+|.++.+.+. ...++..+.... ... +.|+||.+|++|+|+||++ +
T Consensus 174 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~-~d~-~~s~sK~~~~~G~r~G~~~--~ 247 (390)
T 1d2f_A 174 PTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ--PHIPWSNVARGD-WAL-LTSGSKSFNIPALTGAYGI--I 247 (390)
T ss_dssp TTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSS--CCCCGGGTCCSS-EEE-EECSHHHHTCGGGCCEEEE--E
T ss_pred CCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcCHHHcchhh-Hhh-ccCccHhhcccChhheEEE--E
Confidence 999999999999999999999999999999999876421 111221111111 133 9999999999999999984 4
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSF 350 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~ 350 (410)
+++++++.+...... ...+.+++..++.++...+++. .+.+++.+++++++++++.+.|+ + ++. +.+
T Consensus 248 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~~---~~~ 315 (390)
T 1d2f_A 248 ENSSSRDAYLSALKG--RDGLSSPSVLALTAHIAAYQQG------APWLDALRIYLKDNLTYIADKMN-AAFPE---LNW 315 (390)
T ss_dssp CSHHHHHHHHHHHHT--TSCCCSCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHH-HHCSS---CCC
T ss_pred CCHHHHHHHHHHHhh--hcccCCCCHHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHHHHHH-hhCCC---CEE
Confidence 456755555442210 1123356677766666555532 23356788899999999999998 7 431 466
Q ss_pred ccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 351 ILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 351 ~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..+.++++.|+.+ +. ++...+++++||.+.|+ + ||+++. +++++++++++|++++++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 316 QIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp CCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred ecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 6777888877643 33 34566664679999875 2 999987 7899999999999998764
No 64
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=2.6e-38 Score=305.41 Aligned_cols=347 Identities=14% Similarity=0.069 Sum_probs=253.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHH--HhhccC-CCccC-cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAEN--LMLERG-ENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
+..|||+.|.| +....| .++.+.+++. +.+..+ ....| .+..|.+++|+++++++. +++++|++ |+
T Consensus 25 ~~~i~l~~g~p-~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~------~~~~~i~~--t~ 94 (423)
T 3ez1_A 25 GLNLNMQRGQP-ADADFD-LSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLD------VKAENVLV--WN 94 (423)
T ss_dssp TCCEESCCCCC-CHHHHH-TTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTT------SCGGGEEE--CS
T ss_pred CceEecCCCCC-ChHhCC-CcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhC------CChhhEEE--eC
Confidence 46899999998 111122 3567877764 444321 23679 888999999999999973 33789999 99
Q ss_pred ChhhHHH--HHHHHHHHhC--C---------CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc
Q 015283 110 SGTGSLR--LAAALIERYF--P---------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 110 ggt~a~~--~~~~~~~~~~--~---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
|+++++. ++.. ..+. + ||+|++++|+|..+...++..|.+++.+++.++ ++|++.+++.+++
T Consensus 95 G~~~al~~~~~~~--~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~ 169 (423)
T 3ez1_A 95 NSSLELQGLVLTF--ALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGT 169 (423)
T ss_dssp SCHHHHHHHHHHH--HHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHS
T ss_pred CcHHHHHHHHHHH--HHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhh
Confidence 9999997 6533 3355 6 699999999999999999999999999998532 4999999999963
Q ss_pred CCCCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHH-HHcCCcccccccCCCCCCCC-CCC---chhHhHHHhhcCCcEEEE
Q 015283 177 APGGSFIL-LHGCAHNPTGIDPTPEQWEKIADVI-QEKNHIPFFDVAYQGFASGS-LDN---DASSVRLFATRGMELLVA 250 (410)
Q Consensus 177 ~~~~~~~i-i~~~p~NPtG~~~~~~~l~~i~~~~-~~~~~~li~Deay~~~~~~~-~~~---~~~~~~~~~~~~~~~i~~ 250 (410)
. ++++++ ++++||||||.+++.+++++|+++| ++||++||+||+|..+.+.+ ... +...+....+..++++++
T Consensus 170 ~-~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 248 (423)
T 3ez1_A 170 D-PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVF 248 (423)
T ss_dssp C-TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEE
T ss_pred C-CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEE
Confidence 1 355555 4678999999999999999999999 99999999999999655432 111 122211112355789999
Q ss_pred ecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC--hhhHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN--PALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 251 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~~ 328 (410)
+||||. +++|+|+||+++ ++++++.+..... ....+++.+.|.++..+|.+ ..+ .+++++.++.++
T Consensus 249 ~S~sK~-~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~----~~~~~~~~~~~~ 316 (423)
T 3ez1_A 249 ASTSKI-TFAGAGLGFVAS---SEDNIRWLSKYLG----AQSIGPNKVEQARHVKFLTEYPGGL----EGLMRDHAAIIA 316 (423)
T ss_dssp EESTTT-SCSSSSCEEEEE---CHHHHHHHHHHHH----HSCSCCCHHHHHHHHHHHHHSTTHH----HHHHHHHHHHHH
T ss_pred eCchhh-ccCCcceEEEEe---CHHHHHHHHHHHh----hhccCCCHHHHHHHHHHHHhccchH----HHHHHHHHHHHH
Confidence 999999 578999999865 7786666554332 23446778888888777775 333 445566777777
Q ss_pred HHHHHHHHHhhhccCCCC-CcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcC-C-----------C--eEEecCC
Q 015283 329 NVRQKLFDSLSAKDKSGK-DWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTK-D-----------G--RISLAGL 390 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~-~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~-~-----------g--Ris~~~~ 390 (410)
++++.+.+.|.+.++..+ .+.+..+.+++|+|+.+ +.+.+.++++++||.+.| | + ||+++..
T Consensus 317 ~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~ 396 (423)
T 3ez1_A 317 PKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP 396 (423)
T ss_dssp HHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS
T ss_pred HHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC
Confidence 777766666651122101 14556778899998855 455666666678999998 2 1 9999766
Q ss_pred CcccHHHHHHHHHHHhhh
Q 015283 391 SLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~ 408 (410)
+++++++++++|++++++
T Consensus 397 ~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 397 PVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999999999999865
No 65
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.1e-38 Score=307.29 Aligned_cols=361 Identities=16% Similarity=0.095 Sum_probs=248.2
Q ss_pred CCCCcccchhHh-hhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC----CCccCcCCcccHHHHHHHHHHhc
Q 015283 17 PPDPILGVSEAF-KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLF 91 (410)
Q Consensus 17 ~~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~aia~~~~ 91 (410)
.++.+......+ +...++++|+|+.|.| +. .+.+.+.+.+++.+.+... ....|.+..|.+++|+++++++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 89 (417)
T 3g7q_A 13 RHSGITRLMEDLNDGLRTPGAIMLGGGNP-AH--IPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLR 89 (417)
T ss_dssp ---CHHHHHHHHHC-----CCEECSCCCC-CC--CHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhhccCCCceEecCcCC-CC--CChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHH
Confidence 445554444443 3345578999999987 11 2222367777777665332 11479889999999999999997
Q ss_pred CCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC-----EEEEc-CCCCcchhhhhhhC----CCCccceeeecC-
Q 015283 92 GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA-----KVLIS-SPTWGNHKNIFNDA----RVPWSEYRYYDP- 160 (410)
Q Consensus 92 ~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd-----~Vl~~-~p~y~~~~~~~~~~----g~~~~~v~~~~~- 160 (410)
+.++..+++++|++ |+|+++++++++..+ +.+|| +|+++ +|+|..+...+... +..+...++...
T Consensus 90 ~~~g~~~~~~~i~~--t~G~t~al~~~~~~l--~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (417)
T 3g7q_A 90 ETLGWDIEPQNIAL--TNGSQSAFFYLFNLF--AGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ 165 (417)
T ss_dssp HHHCCCCCGGGEEE--ESCHHHHHHHHHHHH--SBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE
T ss_pred HHhCCCCCcccEEE--eCCcHHHHHHHHHHH--cCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc
Confidence 77777788999999 999999999985433 66887 89997 99999987665322 222222232111
Q ss_pred CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 161 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 161 ~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
.++.+|++.++ +. ++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+... .... .. .
T Consensus 166 ~~~~~d~~~l~--~~---~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~-~~~~--~~--~ 235 (417)
T 3g7q_A 166 FKYHVDFEHLH--IG---EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG-IIFS--EA--R 235 (417)
T ss_dssp EEEECCGGGCC--CC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC-CBCS--CC--C
T ss_pred cccccCHHHhc--cc---cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc-cccc--cc--c
Confidence 24678988887 43 36888888999999999999999999999999999999999999764321 1000 00 0
Q ss_pred hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 320 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 320 (410)
....++++++.|+|| ++++|+|+||++. ++++++++..... ....+++.+++.++..++++.++ .++.
T Consensus 236 ~~~~~~~i~~~s~sK-~~~~G~r~G~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~----~~~~ 303 (417)
T 3g7q_A 236 PLWNPNIILCMSLSK-LGLPGSRCGIIIA---NDKTITAIANMNG----IISLAPGGMGPAMMCEMIKRNDL----LRLS 303 (417)
T ss_dssp CCCCTTEEEEEESGG-GTCTTSCCEEEEC---CHHHHHHHHHHHH----HHCCCCCSHHHHHHHHHHHTTCH----HHHH
T ss_pred cCCCCCEEEEEechh-ccCCCcceEEEEe---CHHHHHHHHHhhc----ceeeCCCcHHHHHHHHHHcCcch----HHHH
Confidence 123468999999999 6889999999744 7886666554322 22345677788888888887654 3333
Q ss_pred HH-HHHHHHHHHHHHHHHhhhc-cCCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-----------
Q 015283 321 EM-MAGRIKNVRQKLFDSLSAK-DKSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD----------- 382 (410)
Q Consensus 321 ~~-~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~----------- 382 (410)
.+ .++.++++++.+.+.|. + ++. ..+.+..+.+++|+|+.+ +.+.+.+.+.++||.+.||
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~-~~l~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~ 381 (417)
T 3g7q_A 304 ETVIKPFYYQRVQQTIAIIR-RYLSE-ERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPW 381 (417)
T ss_dssp HHTHHHHHHHHHHHHHHHHH-HHCCT-TTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHH-Hhccc-CCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCcccc
Confidence 34 67778888888888776 5 321 014566788899998743 4444433345579999763
Q ss_pred ----C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 383 ----G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 383 ----g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ |||++. +++++++++++|+++++++
T Consensus 382 ~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 382 PHTHQCMRMNYVP-EPDKIEAGVKILAEEIERA 413 (417)
T ss_dssp GGGGGEEEEESCS-CHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEecC-CHHHHHHHHHHHHHHHHHH
Confidence 2 999987 9999999999999998753
No 66
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1.3e-37 Score=294.45 Aligned_cols=320 Identities=13% Similarity=0.115 Sum_probs=248.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+++|+|+.|++ ..+ +++.+.+++.+.+.. ...| |..+..++|+++++++.. ++++|++ ++||++
T Consensus 32 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~~~------~~~~v~~--~~g~t~ 95 (363)
T 3ffh_A 32 TKITKLSSNEN----PLG-TSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFYQL------EEEELIF--TAGVDE 95 (363)
T ss_dssp SCCEECSSCSC----TTC-CCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHHTC------CGGGEEE--ESSHHH
T ss_pred CceEEccCCCC----CCC-CCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHhCC------ChhhEEE--eCCHHH
Confidence 57899999986 333 379999999887643 3556 567899999999999742 3689999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.++... .+.+||+|++++|+|..+...++..|.+++.+++. .++.+|++++++.+++ +++++++++|+|||
T Consensus 96 a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~p~npt 168 (363)
T 3ffh_A 96 LIELLTRV--LLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL--QDGEHDLEGMLNAIDE---KTTIVWICNPNNPT 168 (363)
T ss_dssp HHHHHHHH--HCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC--TTSCCCHHHHHHHCCT---TEEEEEEESSCTTT
T ss_pred HHHHHHHH--HccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--CCCCcCHHHHHHhccc---CCCEEEEeCCCCCc
Confidence 99998443 36799999999999999999999999999999884 3678999999999875 67888889999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++.++++.|++ |+++|+||+|.++.++ . ..+........++++++.|+||.+|++|+|+||+++ +
T Consensus 169 G~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~~-~---~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~---~ 240 (363)
T 3ffh_A 169 GNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVTP-Q---PEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA---D 240 (363)
T ss_dssp CCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCSS-C---CCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE---C
T ss_pred CCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcCc-c---ccCHHHHhhcCCCEEEEeechhhhcCchhceeeeec---C
Confidence 999999999999988887 9999999999987752 1 112223334567899999999999999999999865 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCccccc
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSFIL 352 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~~ 352 (410)
+++++++.. ... ..+++.+++.++...|++. +++++.+++++++++++.+.|+ + .+ +.+.+
T Consensus 241 ~~~~~~l~~----~~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~-~~~g----~~~~~ 302 (363)
T 3ffh_A 241 KEIIRQLNI----VRP--PFNTTSIGQKLAIEAIKDQ-------AFIGECRTSNANGIKQYEAFAK-RFEK----VKLYP 302 (363)
T ss_dssp HHHHHHHHH----TCC--SCCCBHHHHHHHHHHHHCH-------HHHHHHHHHHHHHHHHHHHHHH-HCTT----CEECC
T ss_pred HHHHHHHHH----hCC--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHh-hCCC----ceECC
Confidence 885555433 322 2357777777777777654 2356788899999999999998 7 55 45554
Q ss_pred CCcceeeecCC--CHH-HHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHh
Q 015283 353 RQIGMFSFTGL--NKA-QSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 353 ~~~~~~~~~~~--~~~-~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l 406 (410)
+ .+.|+|+.+ +.+ +.+.+.+ +||.+.+|. ||+++ +++++++++++|++++
T Consensus 303 ~-~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 303 A-NGNFVLIDLGIEAGTIFSYLEK-NGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKLL 363 (363)
T ss_dssp C-CSSEEEEECSSCHHHHHHHHHH-TTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred C-CCeEEEEECCCCHHHHHHHHHH-CCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHhC
Confidence 4 456777765 344 4555554 699998862 99985 7899999999998864
No 67
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=3.7e-38 Score=299.47 Aligned_cols=309 Identities=17% Similarity=0.139 Sum_probs=242.6
Q ss_pred HhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh
Q 015283 63 LMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK 142 (410)
Q Consensus 63 ~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~ 142 (410)
+.+.... ..|.+..|.+++|+++++++.. ++++++++ ++||++++.++.. ..+.+||+|++++|+|.++.
T Consensus 50 ~~~~~~~-~~y~~~~g~~~l~~~la~~~~~-----~~~~~v~~--~~g~~~a~~~~~~--~l~~~gd~Vl~~~~~~~~~~ 119 (375)
T 3op7_A 50 KKLQGTK-LNYGWIEGSPAFKKSVSQLYTG-----VKPEQILQ--TNGATGANLLVLY--SLIEPGDHVISLYPTYQQLY 119 (375)
T ss_dssp HHHHTSC-CSSCCTTCCHHHHHHHHTTSSS-----CCGGGEEE--ESHHHHHHHHHHH--HHCCTTCEEEEEESSCTHHH
T ss_pred HHHhcCC-cCCCCCCChHHHHHHHHHHhcc-----CChhhEEE--cCChHHHHHHHHH--HhcCCCCEEEEeCCCchhHH
Confidence 3333343 7788899999999999999642 23689999 9999999999843 34779999999999999999
Q ss_pred hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccC
Q 015283 143 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 222 (410)
Q Consensus 143 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay 222 (410)
..++..|++++.+++.+++++.+|++.+++.+++ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|
T Consensus 120 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~ 196 (375)
T 3op7_A 120 DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP---TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVY 196 (375)
T ss_dssp HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT---TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc---CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 9999999999999986566788999999999874 5667777899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHH
Q 015283 223 QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI 302 (410)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
.++...+ .. ...+..+++++++|+||.+|++|+|+||+++ ++++++. +.........+++.+.+.+
T Consensus 197 ~~~~~~~----~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~---~~~l~~~----~~~~~~~~~~~~~~~~~~~ 262 (375)
T 3op7_A 197 RSFSELD----VP---SIIEVYDKGIAVNSLSKTYSLPGIRIGWVAA---NHQVTDI----LRDYRDYTMICAGVFDDLV 262 (375)
T ss_dssp CCCSSSC----CC---CHHHHCTTEEEEEESSSSSSCGGGCCEEEEC---CHHHHHH----HTTTGGGTTSCCCHHHHHH
T ss_pred ccccccC----CC---chhhhcCCEEEEeEChhhcCCcccceEEEEe---CHHHHHH----HHHHHhhhccCCCcHHHHH
Confidence 9988541 11 1223456889999999999999999999743 7785554 4433333334566677776
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcE
Q 015283 303 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHV 377 (410)
Q Consensus 303 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi 377 (410)
+...++.. .+.+++.+++++++++.+.+.|+ +.+. +.+..+.++++.|+.+ + .+++.++++++||
T Consensus 263 ~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 332 (375)
T 3op7_A 263 AQLALAHY------QEILERNRHILEENLAILDQWIE-EEPL---VSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGV 332 (375)
T ss_dssp HHHHHHTH------HHHHHHHHHHHHHHHHHHHHHHH-HCTT---EEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCE
T ss_pred HHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHh-hCCC---ceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCE
Confidence 66666532 34467888888999999999998 7531 4566677777766532 3 4557777777899
Q ss_pred EEcCCC--------eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 378 YMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 378 ~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+.|+. ||+++. +.+++++++++|+++++++
T Consensus 333 ~v~~g~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~~~ 371 (375)
T 3op7_A 333 LLVPGNRFERDGYVRLGFAC-EQETLIKGLEKLSQFLRRF 371 (375)
T ss_dssp ECEEGGGGTCTTEEEECCCS-CHHHHHHHHHHHHHHHGGG
T ss_pred EEeChhhhCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHH
Confidence 998862 999887 6689999999999998764
No 68
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=2e-37 Score=293.54 Aligned_cols=327 Identities=17% Similarity=0.144 Sum_probs=252.2
Q ss_pred cCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 31 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 31 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+.+|+|+.|.+ ..+ .++.+.+++.+.+.......|++ .+..++|+++++++... ++++|++ |+|
T Consensus 27 ~~~~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~~-----~~~~i~~--~~g 93 (367)
T 3euc_A 27 PDSHGLVKLDAMEN----PYR-LPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQVP-----AGMEVLL--GNG 93 (367)
T ss_dssp CCCTTCEECCSSCC----CCC-CCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTCC-----TTCEEEE--EEH
T ss_pred CCCCCeeEccCCCC----CCC-CCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCCC-----CcceEEE--cCC
Confidence 33457899999986 333 37899999888775322367854 68899999999997431 3678999 999
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
|++++.++.. ..+.+||+|+++.|+|..+...++..|.+++.+++. .++.+|++.+++.+++. +++++++++|+
T Consensus 94 ~t~a~~~~~~--~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~ 167 (367)
T 3euc_A 94 SDEIISMLAL--AAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLR--ADFTLDRGAMLAAMAEH--QPAIVYLAYPN 167 (367)
T ss_dssp HHHHHHHHHH--HTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECC--TTSCCCHHHHHHHHHHH--CCSEEEEESSC
T ss_pred HHHHHHHHHH--HHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHHHhhcc--CCCEEEEcCCC
Confidence 9999999843 336799999999999999999999999999999883 46789999999998752 45566668999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
||||.+++.+++++|+++|++| |+++|+||+|.++.... .. ......++++++.|+||. +++|+|+||++
T Consensus 168 nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~---~~----~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~ 239 (367)
T 3euc_A 168 NPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES---WM----SRLTDFGNLLVMRTVSKL-GLAGIRLGYVA 239 (367)
T ss_dssp TTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC---SG----GGGGTCTTEEEEEECCCT-TSCSCCEEEEE
T ss_pred CCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc---hH----HHHhhCCCEEEEecchhh-cccccCceeee
Confidence 9999999999999999999999 99999999999877431 11 123445689999999999 89999999985
Q ss_pred EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283 269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 348 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 348 (410)
+ +++++++ +..... ..+++.+++.++...|++. +++++.+++++++++++.+.|+ +++. +
T Consensus 240 ~---~~~~~~~----~~~~~~--~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~-~~~g---~ 299 (367)
T 3euc_A 240 G---DPQWLEQ----LDKVRP--PYNVNVLTEATALFALEHV-------AVLDEQAAQLRAERSRVAEGMA-AHGG---V 299 (367)
T ss_dssp E---CHHHHHH----HGGGCC--SSCCCHHHHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHHHHH-TSTT---C
T ss_pred e---CHHHHHH----HHHhCC--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHH-hCCC---c
Confidence 5 7774444 443332 2356777888888888763 2346788889999999999998 7721 4
Q ss_pred ccccCCcceeeecCC-CHHHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhh
Q 015283 349 SFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 349 ~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
.. .+..+.|+|+.+ +.+.+.+.+.++||.+.+++ ||+++ +++++++++++|+++++
T Consensus 300 ~~-~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 300 TV-FPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp EE-CCCSSSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred EE-CCCCCeEEEEECCCHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHhc
Confidence 53 345577888766 44444444456799998752 99985 78999999999999875
No 69
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=9.3e-38 Score=303.44 Aligned_cols=367 Identities=14% Similarity=0.080 Sum_probs=259.3
Q ss_pred CCCCCcccchhHhh-hcCCCCee-eeeeeeeecCCCcccccHHHHHHHHHhhcc-------C----CCccCcCCcccHHH
Q 015283 16 APPDPILGVSEAFK-ADTDEKKL-NLGVGAYRTEELQPYVLDVVKKAENLMLER-------G----ENKEYLPIEGLAAF 82 (410)
Q Consensus 16 ~~~~~~~~~~~~~~-~~~~~~~i-~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-------~----~~~~y~~~~g~~~l 82 (410)
.+++++..+...+. ...++++| +|+.|.| +. .+.+.+.+.+++.+.... . +...|.+..|.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~p-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l 88 (444)
T 3if2_A 12 TQPTGISQLMDDLGDALKSDQPVNMLGGGNP-AK--IDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAF 88 (444)
T ss_dssp HSCCHHHHHHHHHHHHHHSSSCCEECSCCCC-CC--CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHH
T ss_pred cCchhHHHHHHHHHhhhcCchhhhccCCCCC-Cc--ccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHH
Confidence 45555655444333 23447899 9999987 11 222235666776666543 2 12569888999999
Q ss_pred HHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC--------------EEEEc-CCCCcchhhh---
Q 015283 83 NKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA--------------KVLIS-SPTWGNHKNI--- 144 (410)
Q Consensus 83 r~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd--------------~Vl~~-~p~y~~~~~~--- 144 (410)
|+++++++...++..+++++|++ |+||++++.+++. ..+.+|| +|+++ +|+|..|...
T Consensus 89 r~~ia~~l~~~~g~~~~~~~i~~--t~G~t~al~~~~~--~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~ 164 (444)
T 3if2_A 89 IDALVGFFNRHYDWNLTSENIAL--TNGSQNAFFYLFN--LFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE 164 (444)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEE--ESSHHHHHHHHHH--HSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred HHHHHHHHHhhcCCCCCHHHEEE--ecCcHHHHHHHHH--HHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence 99999999877777788999999 9999999999843 3356887 78886 8999999873
Q ss_pred ---hhhCCCCccceeeecCC---CcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 145 ---FNDARVPWSEYRYYDPK---TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 145 ---~~~~g~~~~~v~~~~~~---~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
+...|.+++.++..+++ ++.+|++.+++.+....++++++++++|+||||.+++.+++++|+++|++||+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 244 (444)
T 3if2_A 165 GQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLII 244 (444)
T ss_dssp SCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEE
Confidence 44567777777763211 357899999987422123678888899999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChh
Q 015283 219 DVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVH 298 (410)
Q Consensus 219 Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (410)
||+|..+... .... .. .....+++++++|+||. +++|+|+||++. ++++++.+..... ....+++.+
T Consensus 245 De~~~~~~~~-~~~~--~~--~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~---~~~l~~~~~~~~~----~~~~~~~~~ 311 (444)
T 3if2_A 245 DNAYGMPFPN-IIYS--DA--HLNWDNNTILCFSLSKI-GLPGMRTGIIVA---DAKVIEAVSAMNA----VVNLAPTRF 311 (444)
T ss_dssp ECTTCTTTTC-CBCS--CC--CCCCCTTEEEEEESTTT-TCGGGCCEEEEC---CHHHHHHHHHHHH----HHHSSCCCH
T ss_pred ECCCCCcccc-cccc--cc--cccCCCCEEEEechhhc-cCCCCceEEEEE---CHHHHHHHHHHHH----hccCCCChH
Confidence 9999754321 1000 00 01234689999999997 789999999744 7786666554332 223356677
Q ss_pred HHHHHHHHhCChhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhc-cCCCCCcccccCCcceeeecC-----CCHHHHHHh
Q 015283 299 GARIVANVVGNPALFDEWKAEMEM-MAGRIKNVRQKLFDSLSAK-DKSGKDWSFILRQIGMFSFTG-----LNKAQSDNM 371 (410)
Q Consensus 299 ~~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l 371 (410)
++.++..++.+..+. ++..+ .++.++++++.+.+.|. + ++. ..+.+..+.+++|+|+. .+.+.+.+.
T Consensus 312 ~~~a~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~-~~l~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~ 385 (444)
T 3if2_A 312 GAAIATPLVANDRIK----QLSDNEIKPFYQKQATLAVKLLK-QALGD-YPLMIHKPEGAIFLWLWFKDLPISTLDLYER 385 (444)
T ss_dssp HHHHHHHHHHTSHHH----HHHHHTHHHHHHHHHHHHHHHHH-HHSSS-SSEEEECCCBSSEEEEEETTCSSCHHHHHHH
T ss_pred HHHHHHHHHHcCchh----HHHHHHHHHHHHHHHHHHHHHHH-Hhccc-CCceEecCCccEEEEEEcCCCCCCHHHHHHH
Confidence 788888888776543 33333 66677777777777776 4 221 01455667888998873 344444434
Q ss_pred hhcCcEEEcCC----------------C--eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 372 TNKWHVYMTKD----------------G--RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 372 l~~~gi~v~~~----------------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.++||.+.|| + ||+++. +++++++++++|+++++++
T Consensus 386 l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 386 LKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp HHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHH
Confidence 45579998763 2 999988 9999999999999998653
No 70
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.8e-38 Score=314.24 Aligned_cols=338 Identities=11% Similarity=0.050 Sum_probs=245.4
Q ss_pred eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc-CCCCC---cccCCceEEEecCCh
Q 015283 36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF-GADNS---VLKEQRVATVQGLSG 111 (410)
Q Consensus 36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~-~~~~~---~~~~~~i~~~~t~gg 111 (410)
+|+|+.|.+ +.+ ++.+.+++.+.... ..|++..|..++|+++++++. ..++. ..++++|++ |+|+
T Consensus 106 ~i~l~~g~~----~~~--~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~--t~G~ 174 (546)
T 2zy4_A 106 SLSYVRDQL----GLD--PAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFA--VEGG 174 (546)
T ss_dssp HHHHHHHTS----CCC--HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEE--EEHH
T ss_pred hhecccCCC----CCC--ChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEE--ECCH
Confidence 789999987 443 46666666665532 679888899999999888764 32222 124688999 9999
Q ss_pred hhHHHHHHHHHH---HhCCCCEEEEcCCCCcchhhhhh--hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEe
Q 015283 112 TGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFN--DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186 (410)
Q Consensus 112 t~a~~~~~~~~~---~~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~ 186 (410)
++++..+...+. .+.+||+|++++|+|+.|...+. ..|++++.+++.++.+|.+|++.+++.+.. +++++++
T Consensus 175 ~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~v~l 251 (546)
T 2zy4_A 175 TAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP---AIKIFFC 251 (546)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST---TEEEEEE
T ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC---CCeEEEE
Confidence 999999854431 25699999999999999988744 456788888876556688999999877643 6777777
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHH--HHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVI--QEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~--~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 264 (410)
++||||||.+++.+++++|+++| +++|++||+||+|.++.++. . ++... ..+++++++||||.+|++|+|+
T Consensus 252 ~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~--~---s~~~~--~~~~~i~~~S~SK~~g~~GlRi 324 (546)
T 2zy4_A 252 VNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDF--Q---SLFAI--CPENTLLVYSFSKYFGATGWRL 324 (546)
T ss_dssp ESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTC--C---CHHHH--CGGGEEEEEESTTTTTCGGGCE
T ss_pred ECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccC--c---CHHHh--CCCCEEEEEeCccccCCCCcce
Confidence 89999999999999999999999 78999999999999887531 1 22121 1258999999999999999999
Q ss_pred ceEEEEeCCchhHHHHHHHH--------Hh-hc-----------------------cCcccCCChhHHHHH-----HHHh
Q 015283 265 GAMNVVCSSSDLAARVKSQL--------KR-LA-----------------------RPMYSNPPVHGARIV-----ANVV 307 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~--------~~-~~-----------------------~~~~~~~~~~~~~~a-----~~~l 307 (410)
||+++ +++++++++...+ .. .. .....+.+...|.++ ..++
T Consensus 325 G~~~~--~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all 402 (546)
T 2zy4_A 325 GVVAA--HQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALM 402 (546)
T ss_dssp EEEEE--ESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEE--CCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHH
Confidence 99844 3434666653211 00 00 011224555565542 2445
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC---------------------HH
Q 015283 308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---------------------KA 366 (410)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~ 366 (410)
++. ..+.++.++.++++++.+.+.|. .+ +...++++++|+|+.+. .+
T Consensus 403 ~~~------~~~~~~~r~~~~~r~~~l~~~L~--~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~ 470 (546)
T 2zy4_A 403 DEA------DEYKHTLKQLIRRRETTLYRELG--MP----PLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGD 470 (546)
T ss_dssp CTT------CHHHHHHHHHHHHHHHHHHGGGT--SS----CCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHH
T ss_pred hcc------HHHHHHHHHHHHHHHHHHHHhcC--CC----cccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHH
Confidence 543 23356778889999988888775 22 34456788999887542 23
Q ss_pred HHHHhhhcCcEEEcCCC---------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 367 QSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 367 ~~~~ll~~~gi~v~~~g---------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
++.++++++||.+.||. ||+++..+++++++++++|++++.+
T Consensus 471 ~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 521 (546)
T 2zy4_A 471 MLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADE 521 (546)
T ss_dssp HHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 45667777899999962 9999876889999999999998764
No 71
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=4.3e-37 Score=290.02 Aligned_cols=313 Identities=16% Similarity=0.182 Sum_probs=238.0
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
++|+|+.|++ ..++ ++.+ .+. . ..+|++. +..++|+++++++.. ++++|++ ++|++++
T Consensus 30 ~~i~l~~~~~--~~~~---~~~v------a~~-~-~~~Y~~~-~~~~lr~~la~~~~~------~~~~v~~--~~G~~~a 87 (356)
T 1fg7_A 30 GDVWLNANEY--PTAV---EFQL------TQQ-T-LNRYPEC-QPKAVIENYAQYAGV------KPEQVLV--SRGADEG 87 (356)
T ss_dssp CSEECSSCCC--SSCC---CCCC------CCC-C-TTSCCCS-SCHHHHHHHHHHHTS------CGGGEEE--ESHHHHH
T ss_pred ceEEeeCCCC--CCCC---CHhH------hhh-h-hccCCCc-cHHHHHHHHHHHhCC------ChHHEEE--cCCHHHH
Confidence 5799999987 2232 3444 222 2 3678654 589999999999732 3688999 9999999
Q ss_pred HHHHHHHHHHhCCC-CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 115 LRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 115 ~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
+..+... .+.+| |+|++++|+|..|...++..|.+++.+++. +++.+|++.+++.++ +++++++++|||||
T Consensus 88 i~~~~~~--~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~----~~~~v~l~~p~npt 159 (356)
T 1fg7_A 88 IELLIRA--FCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD----GVKVVYVCSPNNPT 159 (356)
T ss_dssp HHHHHHH--HCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT----TEEEEEEESSCTTT
T ss_pred HHHHHHH--HhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc----CCCEEEEeCCCCCC
Confidence 9998433 36799 999999999999999999999999988873 457789999987774 45677778999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++|+++|+ +|+++|+||+|.++... . ++..+.+..+++++++|+||.+|++|+|+||+++ +
T Consensus 160 G~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~---~---~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~---~ 229 (356)
T 1fg7_A 160 GQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA---N 229 (356)
T ss_dssp CCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG---G---CSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEE---C
T ss_pred CCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC---C---cHHHHHhhCCCEEEEecchHhhcCchhhhEEEEe---C
Confidence 99999999999999999 99999999999987621 1 1112234456899999999999999999999865 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++.+.. ... .+ +++.+++.++...|++.++ +++++.+++++++++++.+.|+ +++. +....+
T Consensus 230 ~~~~~~l~~----~~~-~~-~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~ 294 (356)
T 1fg7_A 230 EEVINLLMK----VIA-PY-PLSTPVADIAAQALSPQGI-----VAMRERVAQIIAEREYLIAALK-EIPC---VEQVFD 294 (356)
T ss_dssp HHHHHHHHH----HSC-SS-CSCHHHHHHHHHHTSHHHH-----HHHHHHHHHHHHHHHHHHHHHH-HSTT---EEEECC
T ss_pred HHHHHHHHH----hcC-CC-CCCHHHHHHHHHHhcCccH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC---ceEECC
Confidence 786555543 222 23 5677888888888875432 1357788889999999999998 7751 222335
Q ss_pred CcceeeecCC-CH-HHHHHhhhcCcEEEcC-C------C--eEEecCCCcccHHHHHHHHHHH
Q 015283 354 QIGMFSFTGL-NK-AQSDNMTNKWHVYMTK-D------G--RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 354 ~~~~~~~~~~-~~-~~~~~ll~~~gi~v~~-~------g--Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
..++|+|+.+ +. ++.+++ .++||.+.+ + + ||+++ +++++++++++|+++
T Consensus 295 ~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~--~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 295 SETNYILARFKASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG--TREESQRVIDALRAE 354 (356)
T ss_dssp CSSSEEEEEETTHHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHTC
T ss_pred CCCeEEEEECCCHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence 5678888765 34 345566 557999998 4 2 99986 578999999998865
No 72
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=4.8e-40 Score=314.37 Aligned_cols=341 Identities=14% Similarity=0.073 Sum_probs=258.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++++|+.|.+ +.++ ++.+.+++.+.+.... ..|++. ..++|+++++++...++..+++++|++ ++||++
T Consensus 31 ~~~i~l~~~~~----~~~~-~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--~~g~~~ 100 (392)
T 3b1d_A 31 PQLLPAWIADM----DFEV-MPEVKQAIHDYAEQLV-YGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVF--VEGVVP 100 (392)
Confidence 37899999987 3333 6888888888775433 667554 889999999998777776677889999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCC-CcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
++.++...+ +.+||+|+++.|+|..+...++..|.+++.+++.+++ ++.+|++.+++.+.+ +++.++++++|+||
T Consensus 101 a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~np 176 (392)
T 3b1d_A 101 AISIAIQAF--TKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE--NDVKLYLLCNPHNP 176 (392)
Confidence 999984433 6699999999999999999999999999999874333 467899999998873 24566667999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcceEEEEe
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
||.+++.+++++|+++|++||+++|+||+|.++.+.+. ...++..+... .+++++++|+||.+|++|+|+||++ +
T Consensus 177 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~--~ 252 (392)
T 3b1d_A 177 GGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGH--EHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAI--I 252 (392)
Confidence 99999999999999999999999999999999886421 11222222121 4688999999999999999999984 4
Q ss_pred CCchhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCcc
Q 015283 272 SSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWS 349 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~ 349 (410)
+++++++.+.... ... +.+++.+++.++...|++. .+++++.++.++++++.+.+.|+ + ++. +.
T Consensus 253 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~-~~~~~---~~ 318 (392)
T 3b1d_A 253 ENPTLCAQFKHQQ----LVNNHHEVSSLGYIATETAYRYG------KPWLVALKAVLEENIQFAVEYFA-QEAPR---LK 318 (392)
Confidence 4455555554422 222 2245666667666666642 23356788889999999999888 6 421 46
Q ss_pred cccCCcceeeecCCC------HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHHHHHhh
Q 015283 350 FILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 350 ~~~~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l~~~l~ 407 (410)
+..+.++++.|+.+. .++...+++++||.+.|+ + ||+++. +++++++++++|+++++
T Consensus 319 ~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 319 VMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP 391 (392)
Confidence 677888888887552 234556665679999875 1 999887 78999999999998875
No 73
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=4.9e-36 Score=283.71 Aligned_cols=341 Identities=14% Similarity=0.103 Sum_probs=249.5
Q ss_pred CCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCC
Q 015283 16 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 95 (410)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~ 95 (410)
.++.++.++.+++..+ ..++|||+.|.+ ..+ .++.+.+++.+.+.. ...|+ ..|..++|+++++++..
T Consensus 7 ~~g~~~~~~~~~~~~~-~~~~idl~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~~~--- 74 (364)
T 1lc5_A 7 AHGGNIREPATVLGIS-PDQLLDFSANIN----PLG-MPVSVKRALIDNLDC--IERYP-DADYFHLHQALARHHQV--- 74 (364)
T ss_dssp SSSCCCHHHHHHHTSC-GGGSEECSSCCC----TTC-CCHHHHHHHHHTGGG--GGSCC-CTTCHHHHHHHHHHHTS---
T ss_pred CCCccHHHHHHhcCCC-ccceEEeccccC----CCC-CCHHHHHHHHHHHHH--hhcCC-CCCHHHHHHHHHHHHCc---
Confidence 3445565555555432 246899999986 222 368899998887754 36684 45899999999999732
Q ss_pred CcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHh
Q 015283 96 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 175 (410)
Q Consensus 96 ~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 175 (410)
++++|++ ++|+++++.++... + +||+|+++.|+|..+...++..|.+++.+++.+++++.+ ++.+.+.+.
T Consensus 75 ---~~~~v~~--~~g~~~al~~~~~~---~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~ 144 (364)
T 1lc5_A 75 ---PASWILA--GNGETESIFTVASG---L-KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALT 144 (364)
T ss_dssp ---CGGGEEE--ESSHHHHHHHHHHH---H-CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCC
T ss_pred ---CHHHEEE--CCCHHHHHHHHHHH---c-CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhcc
Confidence 3678999 99999999997433 3 789999999999999999999999999998843233333 465665553
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283 176 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 255 (410)
Q Consensus 176 ~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 255 (410)
. +++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++ .... ...+..++++++.|+||
T Consensus 145 ~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~---~~~~~~~~~i~~~s~sK 216 (364)
T 1lc5_A 145 P---DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE--TGFI---PALKDNPHIWVLRSLTK 216 (364)
T ss_dssp T---TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTC--CCSG---GGCTTCTTEEEEEESTT
T ss_pred C---CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCc--cchh---hHhccCCCEEEEEECch
Confidence 2 45666778999999999999999999999999999999999999887531 1111 22234568999999999
Q ss_pred cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
.+|++|+|+||++ +.++++++++... .. ..+++.+++.++...|++. +++++.+++++++++++.
T Consensus 217 ~~~~~G~r~G~~~--~~~~~~~~~l~~~----~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~ 281 (364)
T 1lc5_A 217 FYAIPGLRLGYLV--NSDDAAMARMRRQ----QM--PWSVNALAALAGEVALQDS-------AWQQATWHWLREEGARFY 281 (364)
T ss_dssp TTTCTTTCCEEEE--CCCHHHHHHHHHH----SC--TTCSCHHHHHHHHHGGGCH-------HHHHHHHHHHHHHHHHHH
T ss_pred hhcCCccceEEEE--ECCHHHHHHHHHh----CC--CCCCCHHHHHHHHHHHhCc-------HHHHHHHHHHHHHHHHHH
Confidence 9999999999984 2488866655432 22 2356777888888888763 235678888999999999
Q ss_pred HHhhhccCCCCCcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHHHHH
Q 015283 336 DSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAI 402 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~~~l 402 (410)
+.|+ +++. +.+.++ .+.|+|+.+. .++.+.+.+ +||.+.|+ + ||+++ +.++++++++.|
T Consensus 282 ~~L~-~~~~---~~~~~~-~g~~~~~~~~~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l 353 (364)
T 1lc5_A 282 QALC-QLPL---LTVYPG-RANYLLLRCEREDIDLQRRLLT-QRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAAL 353 (364)
T ss_dssp HHHH-TSTT---EEECCC-SSSEEEEEESCTTCCHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHH
T ss_pred HHHh-cCCC---CEECCC-CCeEEEEECCCcHHHHHHHHHH-CCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHH
Confidence 9998 7721 455444 4566666442 245666665 59999875 2 99975 578899999999
Q ss_pred HHHhhhc
Q 015283 403 IDSYHNV 409 (410)
Q Consensus 403 ~~~l~~~ 409 (410)
+++++.+
T Consensus 354 ~~~~~~~ 360 (364)
T 1lc5_A 354 RNVLTGI 360 (364)
T ss_dssp HHHC---
T ss_pred HHHhhcc
Confidence 9887653
No 74
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=3.1e-36 Score=281.87 Aligned_cols=313 Identities=16% Similarity=0.172 Sum_probs=235.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.+.|+|+.+.+ ..+ +++.+.+++.+.... ...| +..|..++|+++++++.. ++++|++ |+|+++
T Consensus 16 ~~~i~l~~n~~----~~~-~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~~~------~~~~i~~--t~G~~~ 79 (337)
T 3p1t_A 16 AQAVCLAFNEN----PEA-VEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHFSC------PEDNLML--VRGIDE 79 (337)
T ss_dssp CCCEECSSCCC----CSC-CCHHHHHHHHHHGGG--TTSC-CTTHHHHHHHHHHHHHTS------CGGGEEE--ESHHHH
T ss_pred CCceEeeCCCC----CCC-CCHHHHHHHHHhhhh--hccC-CCCchHHHHHHHHHHhCc------CHHHEEE--eCCHHH
Confidence 46899998875 222 378999998887754 3678 567999999999999732 3679999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.++.. .+ +||+|++++|+|..+...++..|.+++.+++ ++++.+|++.+++. .+++++++++|+|||
T Consensus 80 ~l~~~~~---~~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~-----~~~~~v~i~~p~npt 148 (337)
T 3p1t_A 80 CFDRISA---EF-SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL--TDDLLLDPNDLAQV-----SRDDCVVLANPSNPT 148 (337)
T ss_dssp HHHHHHH---HS-TTSEEEEESSSCSHHHHHHTTSCCEEEEECB--CTTSSBCHHHHTTC-----CTTEEEEEESSCTTT
T ss_pred HHHHHHH---hc-CCCeEEEeCCCcHHHHHHHHHcCCEEEEecC--CCCCCCCHHHHHhh-----cCCCEEEEeCCCCCC
Confidence 9998733 34 9999999999999999999999999999987 34678999988764 256788889999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++.+| |+++++ +|+||+|.+|..... . .....+++++++|+||.+|++|+|+||+++ +
T Consensus 149 G~~~~~~~l~~l---~~~~~~-~ivDea~~~~~~~~~--~------~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~ 213 (337)
T 3p1t_A 149 GQALSAGELDQL---RQRAGK-LLIDETYVDYSSFRA--R------GLAYGENELVFRSFSKSYGLAGLRLGALFG---P 213 (337)
T ss_dssp CCCCCHHHHHHH---HHHCSE-EEEECTTGGGSSCSS--S------CCCCBTTEEEEEESSSTTCCTTTCCEEEEC---C
T ss_pred CCCCCHHHHHHH---HHhCCc-EEEECCChhhccccc--c------ccccCCCEEEEeeCchhccCcchheEEEEe---C
Confidence 999999987777 566776 666999998775321 0 012335789999999999999999999754 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++.+ .... ...+++..++.++..+|++.+. +++.++++.++++++.+.|+ ++| +.+.++
T Consensus 214 ~~~~~~l----~~~~--~~~~~~~~~~~a~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~ 275 (337)
T 3p1t_A 214 SELIAAM----KRKQ--WFCNVGTLDLHALEAALDNDRA-------REAHIAKTLAQRRRVADALR-GLG----YRVASS 275 (337)
T ss_dssp HHHHHHH----HTTS--CTTCSCHHHHHHHHHHHTCHHH-------HHHHHHHHHHHHHHHHHHHH-HTT----CCBCCC
T ss_pred HHHHHHH----Hhhc--CCCCCCHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHHHHH-HCc----CEECCC
Confidence 7755544 3322 2235667777777778876432 23555666777888999998 876 456666
Q ss_pred CcceeeecCCCHHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 354 QIGMFSFTGLNKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 354 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.++++.|...+.+.+.++++++||.+.+|. |||++ ++++++++++.|++++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~ 336 (337)
T 3p1t_A 276 EANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYSDH 336 (337)
T ss_dssp SSSEEEEECTTTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHHTC-
T ss_pred CCeEEEEEcCCHHHHHHHHHHCCeEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhhc
Confidence 666555444344455555666799998863 99985 689999999999988653
No 75
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=7.4e-36 Score=283.01 Aligned_cols=325 Identities=14% Similarity=0.160 Sum_probs=243.6
Q ss_pred eeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.|||+.|.+ ..+ .++.+.+++.+.+... ....|++..+ .++|+++++++.+.+|..+++++|++ ++|+++
T Consensus 32 ~idl~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~--~~G~~~ 103 (369)
T 3cq5_A 32 DIRLNTNEN----PYP-PSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWA--ANGSNE 103 (369)
T ss_dssp SEECSSCCC----CSC-CCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEE--ESHHHH
T ss_pred ceeccCCCC----CCC-CCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEE--CCChHH
Confidence 489999986 222 3688888887776431 1266865555 79999999998766565666789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++..+... .+.+||+|++++|+|..+...++..|.+++.++. ++++.+|++.+++.+++. +++++++++|+|||
T Consensus 104 al~~~~~~--l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~npt 177 (369)
T 3cq5_A 104 ILQQLLQA--FGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSR--GADFRIDMDVALEEIRAK--QPDIVFVTTPNNPT 177 (369)
T ss_dssp HHHHHHHH--HCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEEC--CTTSSCCHHHHHHHHHHH--CCSEEEEESSCTTT
T ss_pred HHHHHHHH--hcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecC--CcCCCCCHHHHHHHhhcc--CCCEEEEeCCCCCC
Confidence 99988433 3679999999999999999999999999999886 345789999999988741 34455569999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC-cEEEEecccccccccCCCcceEEEEeC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
|.+++.+++++|++ .+++++|+||+|.++..+ . +...+.+..+ +++++.|+||.+|++|+|+||+++
T Consensus 178 G~~~~~~~l~~l~~---~~~~~li~De~~~~~~~~---~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~--- 245 (369)
T 3cq5_A 178 GDVTSLDDVERIIN---VAPGIVIVDEAYAEFSPS---P---SATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA--- 245 (369)
T ss_dssp CCCCCHHHHHHHHH---HCSSEEEEECTTGGGCCS---C---CGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEE---
T ss_pred CCCCCHHHHHHHHH---hCCCEEEEECCchhhcCC---c---chHHHHhhCCCCEEEEEechHhcCCcccceEEEEe---
Confidence 99999888888755 455999999999988742 1 1112223445 889999999999999999999865
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
++++++. +..... .+ +++.+++.++...|++. +++++.+++++++++++.+.|+ +.| +.+.+
T Consensus 246 ~~~~~~~----l~~~~~-~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~ 307 (369)
T 3cq5_A 246 NPAFIDA----VMLVRL-PY-HLSALSQAAAIVALRHS-------ADTLGTVEKLSVERVRVAARLE-ELG----YAVVP 307 (369)
T ss_dssp CTHHHHH----HHTTSC-TT-CSCHHHHHHHHHHHHTH-------HHHHTHHHHHHHHHHHHHHHHH-HHT----CEEEC
T ss_pred CHHHHHH----HHHcCC-CC-CCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHH-hCC----CEECC
Confidence 6675444 333322 22 46777777777777653 2346778889999999999998 776 35544
Q ss_pred CCcceeeecCC--CHH-HHHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 353 RQIGMFSFTGL--NKA-QSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 353 ~~~~~~~~~~~--~~~-~~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
..+.|+|+.+ +.. +.+.+ .++||.+.+++ ||+++ +++++++++++|++++..
T Consensus 308 -~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~~~~~iRis~~--~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 308 -SESNFVFFGDFSDQHAAWQAF-LDRGVLIRDVGIAGHLRTTIG--VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp -CSSSEEEEECCSSHHHHHHHH-HHTTEECBCCSCTTEEEEECC--CHHHHHHHHHHHHHHHTT
T ss_pred -CCCeEEEEECCCCHHHHHHHH-HHCCEEEEECCCCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 4456777654 343 45555 45799999873 99986 689999999999998754
No 76
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.8e-35 Score=279.32 Aligned_cols=335 Identities=16% Similarity=0.154 Sum_probs=243.4
Q ss_pred CCCCCCcccchhHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCC
Q 015283 15 MAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD 94 (410)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~ 94 (410)
..+..++....+ ..++++|||+.|.+ ..+ +++.+.+++.+.+.. ...| +..+..++|+++++++..
T Consensus 11 ~~~g~~~~~~~~----~~~~~~idl~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~~~-- 76 (361)
T 3ftb_A 11 MIHGGDIYTEGV----FKGRELLDYSSNIN----PLG-IPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYLKL-- 76 (361)
T ss_dssp ---------------------CEETTCCCC----TTC-SCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHHTC--
T ss_pred ccCCCCHHHHhh----cCCCCEEEecCCCC----CCC-CCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHhCC--
Confidence 444554544333 22457899999976 222 368899888887754 3567 567899999999999732
Q ss_pred CCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH
Q 015283 95 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 174 (410)
Q Consensus 95 ~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 174 (410)
++++|++ ++||++++.++.. .+ |+|+++.|+|..+...++..|.+++.+++.+ +..++++.+++.+
T Consensus 77 ----~~~~i~~--~~g~t~al~~~~~---~~---d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~l~~~l 142 (361)
T 3ftb_A 77 ----KDIGIVL--GNGASEIIELSIS---LF---EKILIIVPSYAEYEINAKKHGVSVVFSYLDE--NMCIDYEDIISKI 142 (361)
T ss_dssp ----CSCEEEE--ESSHHHHHHHHHT---TC---SEEEEEESCCTHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHT
T ss_pred ----CcceEEE--cCCHHHHHHHHHH---Hc---CcEEEecCChHHHHHHHHHcCCeEEEeecCc--ccCCCHHHHHHhc
Confidence 3689999 9999999999733 23 9999999999999999999999999998843 3456778999888
Q ss_pred hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc
Q 015283 175 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 254 (410)
Q Consensus 175 ~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 254 (410)
++ ++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ ... +........+++++++|+|
T Consensus 143 ~~----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~---~~~~~~~~~~~~i~~~s~s 214 (361)
T 3ftb_A 143 DD----VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSS---SFVGEIKNYSCLFIIRAMT 214 (361)
T ss_dssp TT----CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTS---SSGGGTTTCSSEEEEEESS
T ss_pred cC----CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-ccc---chhHhcccCCCEEEEeeCh
Confidence 64 556667999999999999999999999999999999999999988864 111 2222334556889999999
Q ss_pred ccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283 255 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 334 (410)
Q Consensus 255 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (410)
|.+|++|+|+||+ ++.++++.++ +..... ..+++..++.++...|++. +++++.+++++++++++
T Consensus 215 K~~~~~G~r~g~~--~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l 279 (361)
T 3ftb_A 215 KFFAMPGIRFGYG--ITNNKEIAAK----IKAKQN--PWNINCFAEMAAINCLKDT-------NYIEESLLWIKKERKRF 279 (361)
T ss_dssp STTSCGGGCCEEE--EESCHHHHHH----HHTTSC--TTCSCHHHHHHHHHTSSCH-------HHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCcceeEE--EeCCHHHHHH----HHhhCC--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHH
Confidence 9999999999997 4457775444 443322 2356777878888888863 23568888999999999
Q ss_pred HHHhhhccCCCCCcc-cccCCcceeeecCC---CH-HHHHHhhhcCcEEEcCC--------C--eEEecCCCcccHHHHH
Q 015283 335 FDSLSAKDKSGKDWS-FILRQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLA 399 (410)
Q Consensus 335 ~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~--------g--Ris~~~~~~~~i~~~~ 399 (410)
.+.|+ +++. +. ..++. +.|+|+.+ +. ++...+.+ +||.+.|| + ||+++ +.+++++++
T Consensus 280 ~~~l~-~~~~---~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~ 351 (361)
T 3ftb_A 280 IEELN-KIGF---IKRVFSPH-ANFVLCRLENISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFL 351 (361)
T ss_dssp HHHHH-HSSS---EEEEECCS-SSEEEEEESSSCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHH
T ss_pred HHHHH-hCCC---CceecCCC-CeEEEEEcCCCCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHH
Confidence 99998 7742 45 44454 45565543 34 44566665 59999875 2 99985 678888999
Q ss_pred HHHHHHhhh
Q 015283 400 DAIIDSYHN 408 (410)
Q Consensus 400 ~~l~~~l~~ 408 (410)
+.|+++.+.
T Consensus 352 ~~l~~~~~~ 360 (361)
T 3ftb_A 352 RALKGVENN 360 (361)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 998887654
No 77
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=5.8e-35 Score=275.89 Aligned_cols=316 Identities=15% Similarity=0.127 Sum_probs=235.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
.++|+|+.|++ ..+ .++.+.+++.+.+... ....|+ ..+..++|+++++++. +++++|++ ++||
T Consensus 26 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~la~~~g------~~~~~i~~--t~g~ 91 (360)
T 3hdo_A 26 ASWIKLNTNEN----PYP-PSPEVVKAILEELGPDGAALRIYP-SASSQKLREVAGELYG------FDPSWIIM--ANGS 91 (360)
T ss_dssp TTSEECSSCCC----SSC-CCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHHHHHHHT------CCGGGEEE--ESSH
T ss_pred cceeeccCCCC----CCC-CCHHHHHHHHHHHhcccchhhcCC-CCchHHHHHHHHHHhC------cCcceEEE--cCCH
Confidence 46899999987 333 3789999998887553 125674 4577999999999973 23789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++++.+++. ..+.+||+|++++|+|.++...++..|.+++.+++. +++.+ +++++.+ ++.++++++|+|
T Consensus 92 ~~al~~~~~--~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~--~~l~~~~-----~~~~v~i~~p~n 160 (360)
T 3hdo_A 92 DEVLNNLIR--AFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLT--GDFRI--AGFPERY-----EGKVFFLTTPNA 160 (360)
T ss_dssp HHHHHHHHH--HHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBC--TTSSB--TTCCSSB-----CSSEEEEESSCT
T ss_pred HHHHHHHHH--HHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCC--CCCCH--HHHHhhc-----CCCEEEEeCCCC
Confidence 999999843 346799999999999999999999999999999883 33333 4443322 223666799999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+++.+++.+| |+++|+++|+||+|.+|... ... ......+++++++|+||.+|++|+|+||+++
T Consensus 161 ptG~~~~~~~l~~l---~~~~~~~li~De~~~~~~~~----~~~---~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-- 228 (360)
T 3hdo_A 161 PLGPSFPLEYIDEL---ARRCAGMLVLDETYAEFAES----NAL---ELVRRHENVVVTRTLSKSYSLAGMRIGLAIA-- 228 (360)
T ss_dssp TTCCCCCHHHHHHH---HHHBSSEEEEECTTGGGSSC----CCT---HHHHHCSSEEEEEESTTTTSCTTSCCEEEEC--
T ss_pred CCCCCcCHHHHHHH---HHHCCCEEEEECChHhhCCc----chh---HHhccCCCEEEEecchHhhcCCccceeeEee--
Confidence 99999998876665 78899999999999987422 111 2234567899999999999999999999744
Q ss_pred CCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 272 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++.+... .. ..+++.+++.++...|++.+ ++++.+++++++++++.+.|+ +.+ +.+.
T Consensus 229 -~~~~~~~~~~~----~~--~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~----~~~~ 289 (360)
T 3hdo_A 229 -RPEVIAALDKI----RD--HYNLDRLAQAACVAALRDQA-------YLSECCRRIRETREWFTTELR-SIG----YDVI 289 (360)
T ss_dssp -CHHHHHHHHHH----SC--SCCSCHHHHHHHHHHHHCHH-------HHHHHHHHHHHHHHHHHHHHH-HTT----CEEC
T ss_pred -CHHHHHHHHHh----CC--CCCCCHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CEEc
Confidence 77865555432 22 23567777777777777532 346788889999999999998 776 4555
Q ss_pred cCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC--------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 352 LRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 352 ~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g--------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
++. +.|+|+.+ +.+.+.+.+.++||.+.+++ ||+++ ++++++++++.|+++-+.
T Consensus 290 ~~~-~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 290 PSQ-GNYLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp CCS-SSEEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHHC-
T ss_pred CCC-ccEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHhcc
Confidence 444 55666533 44444444455799998852 99986 789999999999988653
No 78
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=5.8e-37 Score=292.60 Aligned_cols=323 Identities=13% Similarity=0.110 Sum_probs=231.7
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhh--cc-CCCccCcCCccc-----HHHHHHHHHHhcCCCCCcccC-Cce
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLML--ER-GENKEYLPIEGL-----AAFNKVTAELLFGADNSVLKE-QRV 103 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~-~~~~~y~~~~g~-----~~lr~aia~~~~~~~~~~~~~-~~i 103 (410)
.+++|+|+.|.| ..+ .++.+.+++.+.. .. .....|++..|. +++|+++++++. .+|..+++ ++|
T Consensus 21 ~~~~i~l~~g~p----~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i 94 (391)
T 3bwn_A 21 SDFVVNLDHGDP----TAY-EEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI 94 (391)
T ss_dssp TTSCEECSSCCC----GGG-HHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred CCCeeEcCCCCC----CCC-CCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence 457899999987 333 2455555543322 11 123679889998 999999999976 55777766 589
Q ss_pred EEEecCChhhHHHHHHHHHHHhCCCC----EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC
Q 015283 104 ATVQGLSGTGSLRLAAALIERYFPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 104 ~~~~t~ggt~a~~~~~~~~~~~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 179 (410)
++ |+|+++++.+++..+ +.+|| +|++++|+|..|...++..|++++.+++.. + .++ . +
T Consensus 95 ~~--t~G~~~al~~~~~~l--~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-~-------~l~----~--~ 156 (391)
T 3bwn_A 95 VV--GTGSTQLCQAAVHAL--SSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDA-W-------GFD----K--K 156 (391)
T ss_dssp EE--EEHHHHHHHHHHHHH--HHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEES-T-------TCC----C--C
T ss_pred EE--eCChHHHHHHHHHHh--cCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCH-H-------HcC----C--C
Confidence 99 999999999984433 66999 999999999999999999999998888732 2 221 1 2
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
+++++++++||||||.+++ +|++.++.++++||+||+|.. +.. ..+ ....+++++++||||.+|+
T Consensus 157 ~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~~~----~~l---~~~~~~~i~~~S~SK~~g~ 221 (391)
T 3bwn_A 157 GPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---PHY----TPI---TRRQDHDIMLFTFSKITGH 221 (391)
T ss_dssp SCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS---TTT----SCC---CCCBCCSEEEEEHHHHHSC
T ss_pred CCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---CCC----Ccc---ccCCCCeEEEEechhhcCC
Confidence 5677778999999999996 344422223399999999973 110 111 1134689999999999999
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHH-------HHHHHHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEW-------KAEMEMMAGRIKNVRQ 332 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~ 332 (410)
+|+|+||+ +++++++++++..... ....+++.++|.++..+|++.. .| .+++++.++.++++++
T Consensus 222 ~GlRiG~~--~~~~~~l~~~l~~~~~----~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
T 3bwn_A 222 AGSRIGWA--LVKDKEVAKKMVEYII----VNSIGVSKESQVRTAKILNVLK---ETCKSESESENFFKYGREMMKNRWE 292 (391)
T ss_dssp GGGCEEEE--EECCHHHHHHHHHHHH----HHHSSCCHHHHHHHHHHHHHHH---HHTTCCCTTTSHHHHHHHHHHHHHH
T ss_pred CccceEEE--EecCHHHHHHHHHHhc----ccccCCCHHHHHHHHHHHhCcc---hhccccccHHHHHHHHHHHHHHHHH
Confidence 99999998 4456776666554332 1234678888888887776532 11 3456788999999999
Q ss_pred HHHHHhhhccCCCCCccccc-------------CCcceeeecCCC-HHHHHHhhhcCcEEEcCC-------C--eEEecC
Q 015283 333 KLFDSLSAKDKSGKDWSFIL-------------RQIGMFSFTGLN-KAQSDNMTNKWHVYMTKD-------G--RISLAG 389 (410)
Q Consensus 333 ~l~~~l~~~~g~~~~~~~~~-------------~~~~~~~~~~~~-~~~~~~ll~~~gi~v~~~-------g--Ris~~~ 389 (410)
++.+.|+ +++. +.+.. +++|+|+|+++. .+.+.++++++||.+.|| + |||++.
T Consensus 293 ~l~~~L~-~~~~---~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~ 368 (391)
T 3bwn_A 293 KLREVVK-ESDA---FTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS 368 (391)
T ss_dssp HHHHHHH-TCSS---EECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS
T ss_pred HHHHHHH-hCCC---cccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC
Confidence 9999998 7631 33322 345668888763 345666777789999985 2 999987
Q ss_pred CCcccHHHHHHHHHHHhhh
Q 015283 390 LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 390 ~~~~~i~~~~~~l~~~l~~ 408 (410)
+++++++++++|++++++
T Consensus 369 -~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 369 -REDVFNVFLERLANMKLI 386 (391)
T ss_dssp -CHHHHHHHHHHHHSCC--
T ss_pred -CHHHHHHHHHHHHHHHHh
Confidence 889999999999988754
No 79
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=5.7e-35 Score=273.23 Aligned_cols=309 Identities=16% Similarity=0.146 Sum_probs=232.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
++.|+|+.|.+ ..+ .++.+.+++.+.+.......|+ ..+..++|+++++++.+. .+++++|++ ++|+++
T Consensus 19 ~~~i~l~~~~~----~~~-~~~~v~~a~~~~~~~~~~~~y~-~~~~~~lr~~la~~~~~~---~~~~~~v~~--~~G~~~ 87 (335)
T 1uu1_A 19 RDKTYLALNEN----PFP-FPEDLVDEVFRRLNSDALRIYY-DSPDEELIEKILSYLDTD---FLSKNNVSV--GNGADE 87 (335)
T ss_dssp CCSEEESSCCC----SSC-CCHHHHHHHHHTCCGGGGGSCC-CSSCHHHHHHHHHHHTCS---SCCGGGEEE--ESSHHH
T ss_pred CcceECCCCCC----CCC-CCHHHHHHHHHHhhhhhhhcCC-CCchHHHHHHHHHHcCCC---CCCHHHEEE--cCChHH
Confidence 35799999986 322 3789999998877322236674 457999999999998643 344789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
++.++.. .+ ||+|+++ |+|..+...++..|.+++.+++ ++++.+|++.+ + +++++++++|+|||
T Consensus 88 al~~~~~---~~--gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l-----~---~~~~v~l~~p~npt 151 (335)
T 1uu1_A 88 IIYVMML---MF--DRSVFFP-PTYSCYRIFAKAVGAKFLEVPL--TKDLRIPEVNV-----G---EGDVVFIPNPNNPT 151 (335)
T ss_dssp HHHHHHH---HS--SEEEECS-SSCHHHHHHHHHHTCEEEECCC--CTTSCCCCCCC-----C---TTEEEEEESSCTTT
T ss_pred HHHHHHH---Hh--CCcEEEC-CCcHHHHHHHHHcCCeEEEecc--CCCCCCCHHHc-----C---CCCEEEEeCCCCCC
Confidence 9999743 33 8999999 9999999999999999998887 34567888877 2 56677779999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|.+++.+++++|+++| | ++|+||+|.++... .. . ...+..+++++++|+||.+|++|+|+||+++ +
T Consensus 152 G~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~----~~--~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~---~ 217 (335)
T 1uu1_A 152 GHVFEREEIERILKTG---A-FVALDEAYYEFHGE----SY--V-DFLKKYENLAVIRTFSKAFSLAAQRVGYVVA---S 217 (335)
T ss_dssp CCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCC----CC--G-GGGGTCSSEEEEEESTTTTTCGGGCCEEEEE---C
T ss_pred CCCCCHHHHHHHHHhC---C-EEEEECcchhhcch----hH--H-HHhhhCCCEEEEecchhhcCCcccCeEEEEe---C
Confidence 9999999999998877 7 89999999876532 11 1 2234456899999999999999999999855 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+++++++.. ... . .+++.+++.++...|++. +++++.+++++++++++.+.|+ +.| +.+. +
T Consensus 218 ~~~~~~l~~----~~~-~-~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~-~ 278 (335)
T 1uu1_A 218 EKFIDAYNR----VRL-P-FNVSYVSQMFAKVALDHR-------EIFEERTKFIVEERERMKSALR-EMG----YRIT-D 278 (335)
T ss_dssp HHHHHHHHH----HSC-T-TCSCHHHHHHHHHHHHTH-------HHHHHHHHHHHHHHHHHHHHHH-HHT----CCBC-C
T ss_pred HHHHHHHHH----hcC-C-CCcCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHH-HCC----cEEc-C
Confidence 786555543 222 2 256777788887777653 2346778888999999999998 776 3443 4
Q ss_pred CcceeeecCCC---H-HHHHHhhhcCcEEEcCCC---eEEecCCCcccHHHHHHHHHHH
Q 015283 354 QIGMFSFTGLN---K-AQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDS 405 (410)
Q Consensus 354 ~~~~~~~~~~~---~-~~~~~ll~~~gi~v~~~g---Ris~~~~~~~~i~~~~~~l~~~ 405 (410)
..++|+|+.+. . ++...+.+ +||.+.|+. ||+++ +++++++++++|+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~iRis~~--~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 279 SRGNFVFVFMEKEEKERLLEHLRT-KNVAVRSFREGVRITIG--KREENDMILRELEVF 334 (335)
T ss_dssp CCSSEEEEECCTHHHHHHHHHHHH-HTEEEEEETTEEEEECC--CHHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCCHHHHHHHHHH-CCEEEEECCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence 45678887663 2 34556655 699998743 99985 457899999998765
No 80
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=3.2e-35 Score=283.41 Aligned_cols=327 Identities=11% Similarity=0.057 Sum_probs=239.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhc-cCC-CccCcCCc-c---cHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-RGE-NKEYLPIE-G---LAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~-~~~y~~~~-g---~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
..+|+|+.|.+ ..+ .++.+++++.+.+. .+. ...|++.. | .++||+++++++....+..+++++|++
T Consensus 56 ~~~i~l~~g~~----~~~-~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~-- 128 (427)
T 2hox_A 56 GCSADVASGDG----LFL-EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVF-- 128 (427)
T ss_dssp TCCEECCSCCC----GGG-HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEE--
T ss_pred CceEEecCcCC----CCC-CCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEE--
Confidence 36799999987 332 25677778777763 232 13498877 8 999999999998766555667899999
Q ss_pred cCChhhHHHHHHHHHHH--------hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC
Q 015283 108 GLSGTGSLRLAAALIER--------YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 179 (410)
|+|+++++.+++ ... +.+||+|++++|+|+.|...++..|.+++.+ .+|++.+++.+.+
T Consensus 129 t~G~~~al~~~~--~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~--- 195 (427)
T 2hox_A 129 GVGVTQLIHGLV--ISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNP--- 195 (427)
T ss_dssp ESHHHHHHHHHH--HHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCG---
T ss_pred eCCHHHHHHHHH--HHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcC---
Confidence 999999999984 344 6799999999999999999999999887643 3577888877654
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
+++++++++||||||.+++ +.+ + ++..+.|++|.+ . . . ++..+ . .+++++++||||.+|+
T Consensus 196 ~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~---~-~-~---s~~~~-~-~~~~i~~~S~SK~~g~ 255 (427)
T 2hox_A 196 EQYIEMVTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW---P-H-Y---TPIKY-K-ADEDILLFTMSKFTGH 255 (427)
T ss_dssp GGEEEEEESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS---T-T-T---SCCCS-C-BCCSEEEEEHHHHTSC
T ss_pred CceEEEEcCCCCCcccccH-HHH-------c--CCCEEEeecccC---C-C-C---Ccccc-C-CCceEEEEeChhcCCC
Confidence 5677788999999999999 422 2 455677776642 1 0 1 11111 1 4589999999999999
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh-hHH----HHHHHHHHHHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA-LFD----EWKAEMEMMAGRIKNVRQKL 334 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~-~~~----~~~~~~~~~~~~~~~~~~~l 334 (410)
+|+|+||+ +++++++++++..... ....+++.++|.++..+|++.. +.+ .+.+++++.++.++++++++
T Consensus 256 ~G~RiG~~--~~~~~~l~~~l~~~~~----~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 329 (427)
T 2hox_A 256 SGSRFGWA--LIKDESVYNNLLNYMT----KNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNI 329 (427)
T ss_dssp GGGCCEEE--EECCHHHHHHHHHHHH----HHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEE--EECCHHHHHHHHHHHH----hcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHH
Confidence 99999998 4445786666655332 2234678888888877776531 110 12345678889999999999
Q ss_pred HHHhhhcc-CCCC----------CcccccCCcceeeecCCC---HHHHHHhhhcCcEEEcCC-------C--eEEecCCC
Q 015283 335 FDSLSAKD-KSGK----------DWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD-------G--RISLAGLS 391 (410)
Q Consensus 335 ~~~l~~~~-g~~~----------~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gi~v~~~-------g--Ris~~~~~ 391 (410)
.+.|+ +. |+.- .+.+..|.+++|+|+.+. .+++.++++++||.+.|| + |||++. +
T Consensus 330 ~~~L~-~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~ 407 (427)
T 2hox_A 330 TALLD-QSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-T 407 (427)
T ss_dssp HHHHT-TSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-C
T ss_pred HHHHH-hCcCccccccccccccccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-C
Confidence 99998 76 3210 022345677999998763 345778876789999885 2 999987 8
Q ss_pred cccHHHHHHHHHHHhhh
Q 015283 392 LAKCEYLADAIIDSYHN 408 (410)
Q Consensus 392 ~~~i~~~~~~l~~~l~~ 408 (410)
++++++++++|++++.+
T Consensus 408 ~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 408 QDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998764
No 81
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.2e-33 Score=265.80 Aligned_cols=311 Identities=14% Similarity=0.129 Sum_probs=228.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.++|||+.|.+ ..+ .++.+.+++.+.+.. ...|++..+ .++|+++++++. +++++|++ |+|+++
T Consensus 15 ~~~id~~~~~~----~~~-~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~--t~g~~~ 78 (350)
T 3fkd_A 15 SEIVNFSTTVW----TDG-DKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRNS------VDNNAILV--TNGPTA 78 (350)
T ss_dssp -CCEECSCCSC----CCS-CCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHTT------CCGGGEEE--ESHHHH
T ss_pred ccEEEccCCCC----CCC-CCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHHH
Confidence 57899999986 333 378999998887732 367866655 899999999963 23689999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee-ecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY-YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
++.++... +. ||+|+++.|+|..+...++..|++++.+++ .+.+ .+++ ++++++++++|+||
T Consensus 79 al~~~~~~---l~-gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~~-----------~~~~~v~i~~p~np 141 (350)
T 3fkd_A 79 AFYQIAQA---FR-GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIG--EADF-----------SNMDFCWLCNPNNP 141 (350)
T ss_dssp HHHHHHHH---TT-TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGG--GSCC-----------TTCSEEEEESSCTT
T ss_pred HHHHHHHH---HC-CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccc--cCcc-----------CCCCEEEEeCCCCC
Confidence 99997433 33 999999999999999999999999999987 3222 2333 24556666999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+++.+++++|+++|+++ ++|+||+|.++.+.+. .. . ...+..+++++++|+||.+|++|+|+||+++
T Consensus 142 tG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~-~~--~--~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~--- 211 (350)
T 3fkd_A 142 DGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEV-IR--P--ADIKGRKNLVMVYSFSHAYGIPGLRIGYIVA--- 211 (350)
T ss_dssp TCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCC-CC--G--GGGTTCSSEEEEEESHHHHSCGGGCCEEEEC---
T ss_pred cCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcc-hh--h--HHhhcCCCEEEEecCchhccCcchheEeEEe---
Confidence 99999999999999888765 9999999998886421 11 1 2234557899999999999999999999844
Q ss_pred CchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChh-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015283 273 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA-LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 351 (410)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 351 (410)
++++++++ ..... ..+++.+++.++...|++.+ +. ++.++.. ++++++.+.|+ +++. +.+.
T Consensus 212 ~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~-~~~~~l~~~L~-~~~~---~~~~ 273 (350)
T 3fkd_A 212 NKDFMKRV----AAFST--PWAVNALAIEAAKFILIHPAQFT-------LPIRKWQ-RNTVDFITALN-RLDG---VEVH 273 (350)
T ss_dssp CHHHHHHH----HTTCC--TTCSCHHHHHHHHHHHHCTTTTC-------CCHHHHH-HHHHHHHHHHH-HSTT---EEEC
T ss_pred CHHHHHHH----HHhCC--CCCCCHHHHHHHHHHHhCHHHHH-------HHHHHHH-HHHHHHHHHHh-cCCC---cEEC
Confidence 77755544 33322 23567778888877777653 21 2233333 78888888888 7721 4555
Q ss_pred cCCcceeeecCC---CH-HHHHHhhhcCcEEEcCCC----------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 352 LRQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 352 ~~~~~~~~~~~~---~~-~~~~~ll~~~gi~v~~~g----------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
++. +.|+|+.+ +. ++.+.|.+++||.+.||. ||+++ ++++++++++.|++++++
T Consensus 274 ~~~-~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 274 PSG-TTFFLLRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp CCS-SSEEEEEESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC
T ss_pred CCC-CcEEEEECCCCCHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence 444 55555433 33 456667664799998762 99985 678899999999998765
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=8.4e-32 Score=257.71 Aligned_cols=329 Identities=11% Similarity=0.031 Sum_probs=235.3
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
++..|||+.|.+ .+.+ .++.+.+++.+.+... ....|.+..|..++++++++++.+..+ .+++++ ++|
T Consensus 42 g~~~idl~~~~~---~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~--~~g 111 (398)
T 3a2b_A 42 GRRVLMFGSNSY---LGLT-TDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAIL--FST 111 (398)
T ss_dssp TEEEEECSCSCT---TCGG-GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEE--ESS
T ss_pred CceEEEeecccc---cCCC-CCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEE--ECC
Confidence 346899999865 1332 3688888887776431 123455667777888888888766554 357888 999
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC-CcEEEEeCCC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG-GSFILLHGCA 189 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~~ii~~~p 189 (410)
|++++..+. ...+.+||.|++++|+|+.+...++..|.+++.+++ +|++.+++.+++.++ +++++++++|
T Consensus 112 gt~a~~~~~--~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~ 182 (398)
T 3a2b_A 112 GFQSNLGPL--SCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGI 182 (398)
T ss_dssp HHHHHHHHH--HHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESB
T ss_pred HHHHHHHHH--HHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCC
Confidence 999999984 333679999999999999999999999999888875 488999999876322 5778888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc-EEEEecccccccccCCCcceEE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
+||||.+.+ +++|.++|++||+++|+||+|..+.++. ...++....+..++ +++++|+||.++++| ||++
T Consensus 183 ~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~ 253 (398)
T 3a2b_A 183 FSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGH---KGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVA 253 (398)
T ss_dssp CTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG---GGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEE
T ss_pred CCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCC---CCCchHhhcCCCcCCeEEEecccccccCCC---cEEE
Confidence 999999876 6788888999999999999998876531 11122122222234 699999999999778 9975
Q ss_pred EEeCCchhHHHHHHHHHhhccCcccCCChhHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283 269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 347 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 347 (410)
+ ++++++.+....... ....++...+.+ +...|++. ++.++.+++++++++++.+.|+ ++|
T Consensus 254 ~---~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~g---- 315 (398)
T 3a2b_A 254 G---DADVIDFLKHNARSV---MFSASMTPASVASTLKALEII-------QNEPEHIEKLWKNTDYAKAQLL-DHG---- 315 (398)
T ss_dssp E---CHHHHHHHHHHCHHH---HSSBCCCHHHHHHHHHHHHHH-------HHCTHHHHHHHHHHHHHHHHHH-HTT----
T ss_pred e---CHHHHHHHHHhcccc---eecCCCCHHHHHHHHHHHHHH-------hhCHHHHHHHHHHHHHHHHHHH-hcC----
Confidence 5 778666655431111 122334444443 33444321 2245778899999999999998 776
Q ss_pred cccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 348 WSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 348 ~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+..+. ++|+|+.+. .++..+++++ ||.+.|+ + ||+++. .+++++++++++|+++++++
T Consensus 316 ~~~~~~~-g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 316 FDLGATE-SPILPIFIRSNEKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp CCBCSCC-SSEEEEECCCHHHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCCC-CCEEEEEcCCHHHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 3555554 677777553 2345666665 9999875 2 999875 58999999999999998764
No 83
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.97 E-value=4e-30 Score=247.62 Aligned_cols=326 Identities=12% Similarity=0.078 Sum_probs=228.9
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccC------CCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG------ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
++++|+.|.+ + +.++.+.+++.+.+... ....|++ ..+..++|+++++++... +++++++
T Consensus 28 ~~i~l~~~~~----~--~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~- 95 (420)
T 1t3i_A 28 PLVYLDNAAT----S--QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINAR-----SPREIVY- 95 (420)
T ss_dssp ECEECBTTTC----C--CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE-
T ss_pred ceEEecCCcc----C--CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE-
Confidence 4789998887 3 34688988888776431 1134543 467899999999997542 2678999
Q ss_pred ecCChhhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283 107 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~--~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 180 (410)
++||++++.++...+. .+.+||+|++++|+|.. +...++..|.+++.++. .+++.+|++.+++.+++ +
T Consensus 96 -~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~---~ 169 (420)
T 1t3i_A 96 -TRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL--DEQESFDLEHFKTLLSE---K 169 (420)
T ss_dssp -ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB--CTTSSBCHHHHHHHCCT---T
T ss_pred -cCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc--CCCCCcCHHHHHHhhCC---C
Confidence 9999999999844331 16799999999999998 45666778999998887 35677899999999875 6
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 260 (410)
++++++++|+||||.+++ +++|.++|++||+++|+|++|..+... . .+... +.++++.|+||.+|++
T Consensus 170 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~---~~~~~----~~di~~~s~sK~~~~~ 236 (420)
T 1t3i_A 170 TKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---L---DVQLI----DCDWLVASGHKMCAPT 236 (420)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---C---CHHHH----TCSEEEEEGGGTTSCT
T ss_pred ceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---C---chhhc----CCCEEEEehhhhcCCC
Confidence 778888999999999888 678888899999999999998754421 1 11111 3678899999998877
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHhhccC--------------------cccCCChhHHHHHHH-HhCChhhHHHHHHH
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKRLARP--------------------MYSNPPVHGARIVAN-VVGNPALFDEWKAE 319 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~a~~-~l~~~~~~~~~~~~ 319 (410)
| +||+++ ++++++++ ...... ...+.+...+.++.. .++. + . ...
T Consensus 237 g--~G~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~-~--~~~ 302 (420)
T 1t3i_A 237 G--IGFLYG---KEEILEAM----PPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDY--L-T--DLG 302 (420)
T ss_dssp T--CEEEEE---CHHHHHHS----CCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHH--H-H--HHC
T ss_pred c--eEEEEE---chHHHhhc----CceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHH--H-H--HhH
Confidence 7 799855 77754443 222110 112344444444322 2221 1 0 112
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC------cceeeec--CCCHHHHHHhhhcCcEEEcCC---------
Q 015283 320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ------IGMFSFT--GLNKAQSDNMTNKWHVYMTKD--------- 382 (410)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~------~~~~~~~--~~~~~~~~~ll~~~gi~v~~~--------- 382 (410)
+++.+++++++++++.+.|+ ++. + +++..+. ++++.|. +.+.+.+.+.++++||.+.++
T Consensus 303 ~~~~~~~~~~~~~~l~~~L~-~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~ 378 (420)
T 1t3i_A 303 MENIHNYEVELTHYLWQGLG-QIP--Q-LRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHR 378 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCT--T-EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCC--C-eEEeCCCccccccCCEEEEEECCCCHHHHHHHHHHCCeEEeeccccchHHHH
Confidence 46778888999999999998 762 1 4444443 4555442 224444445556679999876
Q ss_pred ----C---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 383 ----G---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 383 ----g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
. ||+++. .+++++++++++|+++++.+
T Consensus 379 ~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 379 LFDASGSARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp HTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred hcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 999875 48899999999999988754
No 84
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.97 E-value=2e-30 Score=246.62 Aligned_cols=322 Identities=13% Similarity=0.084 Sum_probs=222.5
Q ss_pred eecCCCcccccHHHHHHHHHhhccCC-------CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGE-------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 116 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~ 116 (410)
++|..+.++.++.+.+++.+.+.... ...|.+..+..++++++++++.. +++++++ ++||++++.
T Consensus 4 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--~~g~t~a~~ 75 (384)
T 1eg5_A 4 YFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGV------SPSEIFF--TSCATESIN 75 (384)
T ss_dssp ECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTS------CGGGEEE--ESCHHHHHH
T ss_pred EEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCC------CCCeEEE--ECCHHHHHH
Confidence 44555555668999999888775321 01133456778999999999732 2578999 999999999
Q ss_pred HHHHHHHH--hCCCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 117 LAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 117 ~~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++...+.. ..+||+|++++|+|+++...+ +..|.+++.+++. .++.+|++.+++.+++ +++++++++|+|
T Consensus 76 ~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~~~n 150 (384)
T 1eg5_A 76 WILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD--SRGVVKLEELEKLVDE---DTFLVSIMAANN 150 (384)
T ss_dssp HHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC--TTSCBCHHHHHHHCCT---TEEEEEEESBCT
T ss_pred HHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC--CCCccCHHHHHHHhCC---CCeEEEEECCCC
Confidence 98554421 169999999999999886655 6789999988873 4577999999999875 677888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcC--CcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 192 PTGIDPTPEQWEKIADVIQEKN--HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~--~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
|||.+++ +++|.++|+++| +++|+||+|. ++.. .. .+ ...+.++++.|+||.+|++| +||+++
T Consensus 151 ptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~-~~~~--~~---~~----~~~~~di~~~s~sK~~g~~G--~G~~~~ 215 (384)
T 1eg5_A 151 EVGTIQP---VEDVTRIVKKKNKETLVHVDAVQT-IGKI--PF---SL----EKLEVDYASFSAHKFHGPKG--VGITYI 215 (384)
T ss_dssp TTCBBCC---HHHHHHHHHHHCTTCEEEEECTTT-TTTS--CC---CC----TTTCCSEEEEEGGGGTSCTT--CEEEEE
T ss_pred CcccccC---HHHHHHHHHhcCCceEEEEEhhhh-cCCc--cc---Cc----hhcCCCEEEecHHHhcCCCc--eEEEEE
Confidence 9999988 567777899999 9999999987 3311 11 11 11246788999999999888 699854
Q ss_pred EeCCchhHHHHHHHHHhh---ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283 270 VCSSSDLAARVKSQLKRL---ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 346 (410)
++++ ++...+... ......+++..++.++...|+. +.+++++.+++++++++++.+.|+ +.+
T Consensus 216 ---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~-~~g--- 280 (384)
T 1eg5_A 216 ---RKGV--PIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI------AVEELSEAAKHMEKLRSKLVSGLM-NLG--- 280 (384)
T ss_dssp ---CTTS--CCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH------HHHTHHHHHHHHHHHHHHHHHHHH-TTT---
T ss_pred ---cCCC--ccccccccCcccccccCCCCChHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHhC-CCC---
Confidence 5542 111111110 0112235566666665555543 133457888899999999999998 755
Q ss_pred CcccccCC------cceeeecCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCc
Q 015283 347 DWSFILRQ------IGMFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSL 392 (410)
Q Consensus 347 ~~~~~~~~------~~~~~~~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~ 392 (410)
+++..+. ...|.+.+.+.+.+.+.+.++||.+.++ + ||+++. .++
T Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~ 359 (384)
T 1eg5_A 281 -AHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTE 359 (384)
T ss_dssp -CEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCH
T ss_pred -eEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCH
Confidence 3443321 1122233445544444445679999873 2 999873 489
Q ss_pred ccHHHHHHHHHHHhhhc
Q 015283 393 AKCEYLADAIIDSYHNV 409 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++|+++++++
T Consensus 360 ~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 360 EEVDYFLKKIEEILSFL 376 (384)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 85
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.97 E-value=6.2e-30 Score=244.66 Aligned_cols=328 Identities=11% Similarity=0.049 Sum_probs=223.8
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC---Ccc--CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE---NKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~--y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
+...|||+.|.|+ +. ..++.+.+++.+.+.. .. ... |....+..++++.+++++.. ++.+++
T Consensus 42 g~~~id~~~~~~~---g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~- 109 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GL-ADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGT-------DDTILY- 109 (399)
T ss_dssp TEEEEECSSCCTT---SC-TTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTC-------SEEEEE-
T ss_pred CeeEEEeeccCcc---cc-cCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCC-------CcEEEE-
Confidence 3468999998652 21 1257777777666533 10 111 22344578999999999632 345554
Q ss_pred ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC---CcEE
Q 015283 107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFI 183 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~---~~~~ 183 (410)
.+|++++..+. ...+.+||.|++++|+|+.+...++..|.+++.++. .|++.+++.+.+.+. ++++
T Consensus 110 --~sGt~a~~~~l--~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 110 --SSCFDANGGLF--ETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp --SCHHHHHHTTH--HHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEE
T ss_pred --CchHHHHHHHH--HHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceE
Confidence 56688888763 344679999999999999999999999999888876 367788887765322 6788
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCC
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~ 262 (410)
+++++|+||||.+++ +++|+++|++||+++|+||+|.....+ .... +.....+ ..+.+++++|+||.++ |+
T Consensus 179 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~~~~--~~~~~~~~~~~~di~~~s~sK~~~--g~ 250 (399)
T 3tqx_A 179 IATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIG-ENGR--GTPEYCGVADRVDILTGTLGKALG--GA 250 (399)
T ss_dssp EEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSS-TTSC--CHHHHHTCTTCCSEEEEESSSSSC--SS
T ss_pred EEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccC-CCCC--chHHhhCCCCCCcEEEecchHhcc--cC
Confidence 888999999999888 778888899999999999999632222 1111 1112222 1245799999999998 44
Q ss_pred CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
+.||++. ++++++.+......... ...++...+.++...++.. .++.++.+++++++++++.+.|+ ++
T Consensus 251 ~gG~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~ 318 (399)
T 3tqx_A 251 SGGYTSG---HKEIIEWLRNRSRPYLF--SNTVAPVIVATSLKVLELL------KTEGPQLRKQLQENSRYFRAGME-KL 318 (399)
T ss_dssp CCEEEEE---CHHHHHHHHHHCHHHHS--SCCCCHHHHHHHHHHHHHH------HHTHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred ceEEEEc---CHHHHHHHHHhCcceec--cCCCcHHHHHHHHHHHHHH------hhccHHHHHHHHHHHHHHHHHHH-Hc
Confidence 5599755 77876666553222211 1234444444444333311 13457888999999999999999 88
Q ss_pred CCCCCcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------C----eEEec-CCCcccHHHHHHHHHHH
Q 015283 343 KSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------G----RISLA-GLSLAKCEYLADAIIDS 405 (410)
Q Consensus 343 g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------g----Ris~~-~~~~~~i~~~~~~l~~~ 405 (410)
| +.+.++. +.|+|+.+ ..++..++++ +||.+.++ + ||+++ ..+++++++++++|+++
T Consensus 319 g----~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 392 (399)
T 3tqx_A 319 G----FQLVPGN-HPIIPVMLGDAQLATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQV 392 (399)
T ss_dssp T----CCBCCCS-SSEEEEEEECHHHHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred C----CCcCCCC-CCEEEEEeCCHHHHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHH
Confidence 7 3555455 44555533 2345666766 69999843 2 99987 35899999999999999
Q ss_pred hhhc
Q 015283 406 YHNV 409 (410)
Q Consensus 406 l~~~ 409 (410)
++++
T Consensus 393 ~~~~ 396 (399)
T 3tqx_A 393 GKKL 396 (399)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8765
No 86
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.97 E-value=4.1e-30 Score=244.72 Aligned_cols=323 Identities=12% Similarity=0.049 Sum_probs=225.9
Q ss_pred eecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 123 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~ 123 (410)
++|..+.+++++.+.+++.+... .+|.+. ..++++++++++.+.+|.+ +++++++ ++||++++..+...
T Consensus 22 ~l~~~~~~~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~--~~g~t~a~~~~~~~-- 90 (386)
T 2dr1_A 22 KLFTAGPVACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLV--PSSGTGIMEASIRN-- 90 (386)
T ss_dssp EECCSSSCCCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEE--SSCHHHHHHHHHHH--
T ss_pred eeecCCCcCCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEE--eCChHHHHHHHHHH--
Confidence 44445556668889888776543 245332 2566666666665555543 3567888 99999999998433
Q ss_pred HhCCCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283 124 RYFPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 201 (410)
Q Consensus 124 ~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~ 201 (410)
.+.+||+|++++|+|.+ +...++..|++++.++.. .++.+|++.+++.+++. ++++++++++|+||||.+.+
T Consensus 91 l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~--- 164 (386)
T 2dr1_A 91 GVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYE--PGKAVKPEDLDDALRKN-PDVEAVTITYNETSTGVLNP--- 164 (386)
T ss_dssp HSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECC---
T ss_pred hhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecC--CCCCCCHHHHHHHHhcC-CCCcEEEEEeecCCcchhCC---
Confidence 36799999999999998 888888999999999873 45678999999999642 25666777899999999765
Q ss_pred HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHH
Q 015283 202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 281 (410)
Q Consensus 202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 281 (410)
+++|.++|++||+++|+|++|..+... . .+ ...+.+++++|+||.++.++ ++||+++ ++++++++.
T Consensus 165 l~~i~~l~~~~~~~li~D~a~~~~~~~-~-----~~----~~~~~di~~~s~sK~~~~~~-g~G~~~~---~~~~~~~~~ 230 (386)
T 2dr1_A 165 LPELAKVAKEHDKLVFVDAVSAMGGAD-I-----KF----DKWGLDVVFSSSQKAFGVPP-GLAIGAF---SERFLEIAE 230 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTBTTBC-C-----CT----TTTTCSEEEEETTSTTCCCS-SCEEEEE---CHHHHHHHT
T ss_pred HHHHHHHHHHcCCeEEEEccccccCcc-c-----cc----cccCCcEEEEeccccccCCC-ceEEEEE---CHHHHHHHh
Confidence 678888899999999999998765431 1 11 12246899999999998652 4899865 677666552
Q ss_pred H------------HHHhh--ccCcccCCChhHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 282 S------------QLKRL--ARPMYSNPPVHGARIVANVVGNPALFDEWKAE--MEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 282 ~------------~~~~~--~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
. .+... ......+++...+.++...|+. +.+. +++.+++++++++++.+.|+ ++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~g~~~~~~~~~~~~~~~l~~~L~-~~g-- 301 (386)
T 2dr1_A 231 KMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRI------IEKMGGKEKWLEMYEKRAKMVREGVR-EIG-- 301 (386)
T ss_dssp TCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHHHH-HTT--
T ss_pred cCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHHHHHHH-HcC--
Confidence 1 11111 1122335566666665544432 1222 56788899999999999998 776
Q ss_pred CCcccccCC---cceeeecCC----CH-HHHHHhhhcCcEEEcCC------C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 346 KDWSFILRQ---IGMFSFTGL----NK-AQSDNMTNKWHVYMTKD------G--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 346 ~~~~~~~~~---~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
+.+..+. .+.++|+.+ +. ++.+++.++ ||.+.++ + ||+++. .+++++++++++|++++++
T Consensus 302 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 302 --LDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp --CCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred --CeeCcCccccCCceEEEEcCCCCCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 3444442 345555432 34 446666665 9999875 2 999874 5899999999999998865
Q ss_pred c
Q 015283 409 V 409 (410)
Q Consensus 409 ~ 409 (410)
+
T Consensus 379 ~ 379 (386)
T 2dr1_A 379 L 379 (386)
T ss_dssp H
T ss_pred c
Confidence 3
No 87
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.97 E-value=5e-30 Score=245.70 Aligned_cols=330 Identities=13% Similarity=0.065 Sum_probs=227.3
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--Cc------cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NK------EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~------~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
+++.|..|.+ + +.++.+.+++.+.+.... .+ .|.+..+..++|+++++++... ++++|++
T Consensus 23 ~~i~l~~~~~----~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~- 90 (406)
T 1kmj_A 23 PLAYLDSAAS----A--QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SAEELVF- 90 (406)
T ss_dssp ECEECCTTTC----C--CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE-
T ss_pred ceEEecCCcc----C--CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE-
Confidence 5788887776 3 347888988887764311 01 1335667899999999997442 2578999
Q ss_pred ecCChhhHHHHHHHHHHH--hCCCCEEEEcCCCCcchh----hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCC
Q 015283 107 QGLSGTGSLRLAAALIER--YFPGAKVLISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~--~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 180 (410)
++||++++.++...+.. +.+||+|++++|+|.+.. ..++..|.+++.++.. +++.+|++.+++.+++ +
T Consensus 91 -~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~---~ 164 (406)
T 1kmj_A 91 -VRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPTLFDE---K 164 (406)
T ss_dssp -ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBC--TTSCBCGGGHHHHCCT---T
T ss_pred -eCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecC--CCCCcCHHHHHHHhcc---C
Confidence 99999999998443321 579999999999987643 3456779999888873 4577899999999875 6
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 260 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 260 (410)
++++++++|+||||.+++ +++|.++|++||+++|+|++|..+... . .+.. .+.+++++|+||.+|++
T Consensus 165 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~---~---~~~~----~~~d~~~~s~~K~~g~~ 231 (406)
T 1kmj_A 165 TRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHP---V---DVQA----LDCDFYVFSGHKLYGPT 231 (406)
T ss_dssp EEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---C---CHHH----HTCSEEEEEGGGTTSCT
T ss_pred CeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCC---C---cccc----cCCCEEEEEchhccCCC
Confidence 788888999999999988 778888899999999999998754321 1 1111 13678899999999888
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHhhc-----------------cCcccCCChhHHHHHH-HHhCChhhHHHHHHHHHH
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKRLA-----------------RPMYSNPPVHGARIVA-NVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~a~-~~l~~~~~~~~~~~~~~~ 322 (410)
| +||+++ ++++++++........ .....+.+...+.++. ..++. +. ...+++
T Consensus 232 G--~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~~---~~~~~~ 301 (406)
T 1kmj_A 232 G--IGILYV---KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEY--VS---ALGLNN 301 (406)
T ss_dssp T--CEEEEE---CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHH--HH---HHCHHH
T ss_pred C--cEEEEE---eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHH--HH---HcCHHH
Confidence 8 799855 6775544322110000 0011223444444432 22221 10 113467
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccC--Ccceeeec--CCCHHHHHHhhhcCcEEEcCC--------------C-
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILR--QIGMFSFT--GLNKAQSDNMTNKWHVYMTKD--------------G- 383 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~--~~~~~~~~--~~~~~~~~~ll~~~gi~v~~~--------------g- 383 (410)
.+++++++++++.+.|+ +++ + +.+..+ .++++.|. +.+.+.+.+.+.++||.+.++ +
T Consensus 302 ~~~~~~~~~~~l~~~L~-~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~ 377 (406)
T 1kmj_A 302 IAEYEQNLMHYALSQLE-SVP--D-LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAM 377 (406)
T ss_dssp HHHHHHHHHHHHHHHHT-TST--T-EEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCE
T ss_pred HHHHHHHHHHHHHHHHh-cCC--C-eEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCe
Confidence 78888999999999998 762 1 455555 56666553 334444445555679998753 3
Q ss_pred -eEEecCC-CcccHHHHHHHHHHHhhhc
Q 015283 384 -RISLAGL-SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 -Ris~~~~-~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++.. ++++++++++.|+++++.+
T Consensus 378 iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 378 CRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 9998753 8899999999999998754
No 88
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.97 E-value=3.4e-29 Score=238.41 Aligned_cols=322 Identities=12% Similarity=0.071 Sum_probs=222.0
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC---CccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE---NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
+...+||+.|.+ .+.+ .++.+.+++.+.+.. +. ...| ....+..++|+++++++. . ++.++
T Consensus 38 g~~~id~~~~~~---~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~------~~~i~-- 104 (384)
T 1bs0_A 38 DRQYLNFSSNDY---LGLS-HHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG-Y------SRALL-- 104 (384)
T ss_dssp TEEEEECSCCCT---TSGG-GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT-C------SEEEE--
T ss_pred CceEEEeeccCc---cCCC-CCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC-C------CcEEE--
Confidence 346789998863 1322 368888888777643 21 1223 345778999999999972 1 23444
Q ss_pred ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEe
Q 015283 107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~ 186 (410)
+.+|++++..+.. ..+.+||.|++++|+|+.+...++..|.+++.+|. .|++++++.+++.++.++++++
T Consensus 105 -~~sGt~a~~~~~~--~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~ 174 (384)
T 1bs0_A 105 -FISGFAANQAVIA--AMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVT 174 (384)
T ss_dssp -ESCHHHHHHHHHH--HHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEE
T ss_pred -eCCcHHHHHHHHH--HhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEE
Confidence 4666899988743 34679999999999999999999999999888874 4789999998864334788888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
++|+||||.+++ +++|.++|++||+++|+||+|..+.++ .... .+....+. ..+++++|+||.++++| ||
T Consensus 175 ~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~~~~--~~~~~~~~-~~di~~~s~sK~~~~~G---G~ 244 (384)
T 1bs0_A 175 EGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIG-EQGR--GSCWLQKV-KPELLVVTFGKGFGVSG---AA 244 (384)
T ss_dssp ESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSS-GGGC--CHHHHTTC-CCSEEEEESSSTTSSCC---EE
T ss_pred eCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceec-CCCC--chHHhcCC-CCcEEEeeccchhhccC---cE
Confidence 999999999998 668888899999999999999766532 1111 11111222 23489999999999777 99
Q ss_pred EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
+++ ++++++.+......... ..+++.+.+.++...++.. .+ ..++.+++++++++++.+.|+ +++
T Consensus 245 ~~~---~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~al~~~------~~~~~~~~~~~~~~~~~~l~~~L~-~~g-- 310 (384)
T 1bs0_A 245 VLC---SSTVADYLLQFARHLIY--STSMPPAQAQALRASLAVI------RSDEGDARREKLAALITRFRAGVQ-DLP-- 310 (384)
T ss_dssp EEE---CHHHHHHHHHHCHHHHS--SBCCCHHHHHHHHHHHHHH------HSHHHHHHHHHHHHHHHHHHHHHT-TSS--
T ss_pred EEe---CHHHHHHHHHhchhhhc--CCCCCHHHHHHHHHHHHHH------hccccHHHHHHHHHHHHHHHHHHH-hcC--
Confidence 855 77876665543211111 1235555555554444321 11 345778889999999999998 876
Q ss_pred CCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHHHHHHHH
Q 015283 346 KDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~~~l~~~ 405 (410)
+++.+ ..+.++|+.+. .++.+.+.+ +||.+.++ + ||+++. .+++++++++++|+++
T Consensus 311 --~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 311 --FTLAD-SCSAIQPLIVGDNSRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp --CEECS-CCSSBCCEEEESHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred --CcccC-CCCCEEEEEeCCHHHHHHHHHHHHH-CCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 34443 44556555442 234556665 59999864 2 899874 3889999999999875
No 89
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.97 E-value=4.5e-30 Score=243.17 Aligned_cols=323 Identities=12% Similarity=0.009 Sum_probs=219.5
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--------CCccCcCCcccHHHHHH-HHHHhcCCCCCcccCCce
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--------ENKEYLPIEGLAAFNKV-TAELLFGADNSVLKEQRV 103 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~y~~~~g~~~lr~a-ia~~~~~~~~~~~~~~~i 103 (410)
+++.++|..|.+ . .++++.+.+++.+.+... +...|.+..+..+++++ +++++.. + ++
T Consensus 6 ~~~~i~ld~~~~----~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~-------~-~v 72 (371)
T 2e7j_A 6 TKDFINIDPLQT----G-GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC-------D-VA 72 (371)
T ss_dssp --CCEECCHHHH----T-CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS-------S-EE
T ss_pred CCCcEEeccccc----C-CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCC-------C-EE
Confidence 456788887664 2 224789999988876442 11234567889999999 9999632 2 78
Q ss_pred EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCcccee--eecCCCcccChhhHHHHHhcCC--C
Q 015283 104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR--YYDPKTVGLDFEGMIADIKAAP--G 179 (410)
Q Consensus 104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~i~~~~--~ 179 (410)
++ ++||++++..+...+ +.+||+|++++|+|.++...++..|.+++.++ . .+++.+|++.+++.+++.. +
T Consensus 73 ~~--~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~l~~~~~~~ 146 (371)
T 2e7j_A 73 RV--TNGAREAKFAVMHSL--AKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTD--YPDYAITPENFAQTIEETKKRG 146 (371)
T ss_dssp EE--ESSHHHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCC--TTTCCCCHHHHHHHHHHHTTTS
T ss_pred EE--eCChHHHHHHHHHHH--hCCCCEEEEccCcchHHHHHHHHcCCeEEEeeccc--CCCCCcCHHHHHHHHHhhcccC
Confidence 88 999999999984433 77999999999999999999999999999988 5 3457899999999987321 2
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
+++++++++|+||||.+++. ++|.++|++||+++|+||+|..+... . .+..+ +.+++++|+||.++.
T Consensus 147 ~~~~v~~~~~~nptG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~---~---~~~~~----~~di~~~s~sK~~~~ 213 (371)
T 2e7j_A 147 EVVLALITYPDGNYGNLPDV---KKIAKVCSEYDVPLLVNGAYAIGRMP---V---SLKEI----GADFIVGSGHKSMAA 213 (371)
T ss_dssp CEEEEEEESSCTTTCCCCCH---HHHHHHHHTTTCCEEEECTTTBTTBC---C---CHHHH----TCSEEEEEHHHHSSC
T ss_pred CeEEEEEECCCCCCcccCCH---HHHHHHHHHcCCeEEEECccccCCCC---C---Chhhc----CCCEEEecCCcCCCC
Confidence 67788889999999999875 77788899999999999998876532 1 11111 245899999999885
Q ss_pred cCCCcceEEEEeCCchhHHH-HHHHHHhhcc-Cc------ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH--HH
Q 015283 260 YAERIGAMNVVCSSSDLAAR-VKSQLKRLAR-PM------YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI--KN 329 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~-~~~~~~~~~~-~~------~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~--~~ 329 (410)
+ .|+||+++ +++++++ +.. ... .. ...++...+.++...++ . +.+ +.++++ ++
T Consensus 214 ~-~~~G~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~---~~~---~~~~~~~~~~ 276 (371)
T 2e7j_A 214 S-GPIGVMGM---KEEWAEIVLRR----SEKYKNKEVELLGCTARGATIITLMASFP---H---VRE---RIKRWDEEVE 276 (371)
T ss_dssp C-SSCEEEEE---CTTTTTTTTCB----CSSCTTSBGGGTTCCCCSHHHHHHHHHHH---H---HHH---HGGGHHHHHH
T ss_pred C-CCcEEEEE---echhhhhhccc----cccCcccccccccCCcCHHHHHHHHHHHH---H---HHH---HHHHHHHHHH
Confidence 4 59999855 5664433 322 111 01 11223332222222222 1 011 455666 78
Q ss_pred HHHHHHHHhhhccCCCCCcccccCC--cceeeecCC-CHH-HHHHhhhcCcEEEcC--------C---C--e-EEecC--
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQ--IGMFSFTGL-NKA-QSDNMTNKWHVYMTK--------D---G--R-ISLAG-- 389 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~--~~~~~~~~~-~~~-~~~~ll~~~gi~v~~--------~---g--R-is~~~-- 389 (410)
+++++.+.|+ +++ +.+..+. .+.++|+.+ +.+ +.+.+. ++||.+.| + + | ++++.
T Consensus 277 ~~~~l~~~L~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~ 350 (371)
T 2e7j_A 277 KARRFAAEME-KLG----IKQLGDNPHNHDLMFFHAEVLYEISKKAK-GGRFFLYRELKSRKIHGIKPGLTRYFKLSTYG 350 (371)
T ss_dssp HHHHHHHHHH-HTT----CEEESSSSCCSSEEEEECHHHHHHHHHSS-SGGGHHHHHHHHTTEECSCTTCCSEEEEECTT
T ss_pred HHHHHHHHHH-HcC----cEEecCCCccCceEEEECCCHHHHHHHHH-HCCEEEEeccccccccCCCCCceEEEEeeccC
Confidence 8888999998 775 3444442 355677665 333 345555 57998865 2 2 9 99985
Q ss_pred CCcccHHHHHHHHHHHhhhcC
Q 015283 390 LSLAKCEYLADAIIDSYHNVS 410 (410)
Q Consensus 390 ~~~~~i~~~~~~l~~~l~~~~ 410 (410)
.+++++++++++|++++++++
T Consensus 351 ~~~~~i~~~~~~l~~~~~~~~ 371 (371)
T 2e7j_A 351 LSDEEVDYVLNAFKEIIEKYS 371 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHHhcC
Confidence 489999999999999988753
No 90
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.97 E-value=6.6e-30 Score=244.06 Aligned_cols=318 Identities=14% Similarity=0.094 Sum_probs=218.4
Q ss_pred CCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHh
Q 015283 47 EELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERY 125 (410)
Q Consensus 47 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~ 125 (410)
..+..++++.+.+++.+.... .|.+ ...++++++++++.+..|. +++ ++++ |+||++++..+... .+
T Consensus 39 ~~~~~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~--~~~~~v~~--t~g~t~al~~~~~~--~~ 106 (393)
T 1vjo_A 39 GPGPSNAHPSVLQAMNVSPVG----HLDP--AFLALMDEIQSLLRYVWQT--ENPLTIAV--SGTGTAAMEATIAN--AV 106 (393)
T ss_dssp SSSCCCCCHHHHHHHSSCCCC----TTSH--HHHHHHHHHHHHHHHHHTC--CCSCEEEE--SSCHHHHHHHHHHH--HC
T ss_pred cCCCCCCCHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhCC--CCCcEEEE--eCchHHHHHHHHHh--cc
Confidence 334445578999888776532 4543 2446666666665554443 356 8999 99999999998433 36
Q ss_pred CCCCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283 126 FPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 203 (410)
Q Consensus 126 ~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~ 203 (410)
.+||+|++++|+|.. +...++..|++++.++.. .++.+|++.+++.+++. +++++++++|+||||.+.+ ++
T Consensus 107 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---l~ 179 (393)
T 1vjo_A 107 EPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKP--WGEVFSLEELRTALETH--RPAILALVHAETSTGARQP---LE 179 (393)
T ss_dssp CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CT
T ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHhhC--CceEEEEeccCCCcceecc---HH
Confidence 799999999999998 888888999999999873 35678999999998742 3456677999999999876 56
Q ss_pred HHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH
Q 015283 204 KIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ 283 (410)
Q Consensus 204 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 283 (410)
+|.++|+++|+++|+||+|. ++.. .. . ....+.++++.|+||.++.+| |+||+++ ++++++++...
T Consensus 180 ~i~~l~~~~~~~li~Dea~~-~g~~--~~---~----~~~~~~di~~~s~sK~l~~~~-~~G~l~~---~~~~~~~~~~~ 245 (393)
T 1vjo_A 180 GVGELCREFGTLLLVDTVTS-LGGV--PI---F----LDAWGVDLAYSCSQKGLGCSP-GASPFTM---SSRAIEKLQRR 245 (393)
T ss_dssp THHHHHHHHTCEEEEECTTT-TTTS--CC---C----TTTTTCSEEECCSSSTTCSCS-SCEEEEE---CHHHHHHHHTC
T ss_pred HHHHHHHHcCCEEEEECCcc-ccCc--CC---c----ccccCccEEEEcCcccccCCC-ceEEEEE---CHHHHHHHhcc
Confidence 77888999999999999988 3321 11 1 112346788999999998787 9999865 77755554221
Q ss_pred ---HHhh------------ccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283 284 ---LKRL------------ARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 347 (410)
Q Consensus 284 ---~~~~------------~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 347 (410)
.... ...... +++..++.++...|+.. ..+++++.+++++++++++.+.|+ +++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g---- 315 (393)
T 1vjo_A 246 RTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLI-----AQEGLANCWQRHQKNVEYLWERLE-DIG---- 315 (393)
T ss_dssp SSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HTT----
T ss_pred CCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHH-----HHccHHHHHHHHHHHHHHHHHHHH-HcC----
Confidence 0000 001112 45666666665554421 122356888899999999999998 776
Q ss_pred cccccCCc---ceeeec----CCCH-HHHHHhhhcCcEEEcCCC--------eEEe-c-CCCcccHHHHHHHHHHHhh
Q 015283 348 WSFILRQI---GMFSFT----GLNK-AQSDNMTNKWHVYMTKDG--------RISL-A-GLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 348 ~~~~~~~~---~~~~~~----~~~~-~~~~~ll~~~gi~v~~~g--------Ris~-~-~~~~~~i~~~~~~l~~~l~ 407 (410)
+++..+.+ +.+.++ +.+. ++.+++.+++||.+.|+. ||++ + ..+++++++++++|+++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 316 LSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp CCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred CcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 34444443 223333 2344 445666654599998752 9994 3 2256679999999998863
No 91
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.97 E-value=2.4e-28 Score=233.90 Aligned_cols=313 Identities=13% Similarity=0.070 Sum_probs=213.3
Q ss_pred eeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccH---HHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 37 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLA---AFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 37 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~---~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.+++.|.| |....+++.+.+.+++...........|+. .|.+ ++++++++++.. +++++ ++||++
T Consensus 21 ~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g~--------~~~i~--~~~g~~ 88 (404)
T 1e5e_A 21 QFGAAIPP-IYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEKT--------EACVA--TSSGMG 88 (404)
T ss_dssp TTCCSSCC-CCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHH
T ss_pred CCCCcCCC-CcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhCC--------CcEEE--eCChHH
Confidence 46888888 555555556666666543222222356755 5665 899999999632 24555 688899
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p 189 (410)
++..+. ...+.+||+|+++.|+|+++.. .++..|.+++.++.. |++++++.+++ +++++++++|
T Consensus 89 ai~~~~--~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~---~t~~v~l~~p 156 (404)
T 1e5e_A 89 AIAATV--LTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKP---NTKIVYFETP 156 (404)
T ss_dssp HHHHHH--HHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCT---TEEEEEEESS
T ss_pred HHHHHH--HHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCC---CCcEEEEECC
Confidence 999873 3347799999999999999888 677889998888762 78899988874 6788888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH-cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceE
Q 015283 190 HNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAM 267 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l 267 (410)
+||||.+++ +++|+++|++ +|+++|+||+|..+.+. . ++ ..+.++++.|+||.++.+|+|+ ||+
T Consensus 157 ~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~---~---~~-----~~~~di~~~S~sK~~~~~g~ri~G~~ 222 (404)
T 1e5e_A 157 ANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT---N---PV-----DFGVDVVVHSATKYINGHTDVVAGLI 222 (404)
T ss_dssp CTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC---C---GG-----GGTCSEEEEETTTTTTCSSCCCCEEE
T ss_pred CCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC---C---cc-----ccCCEEEEEcCccccCCCCCCeEEEE
Confidence 999999885 7788888999 99999999999987742 1 11 1247899999999999999998 998
Q ss_pred EEEeCCchhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC---
Q 015283 268 NVVCSSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--- 343 (410)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g--- 343 (410)
++ +++.++ +.+....... ....+...+.++...+++.. ...++..++.+.+.+.++ +..
T Consensus 223 ~~---~~~~~~---~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~l~~~l~-~~~~v~ 285 (404)
T 1e5e_A 223 CG---KADLLQ---QIRMVGIKDITGSVISPHDAWLITRGLSTLN----------IRMKAESENAMKVAEYLK-SHPAVE 285 (404)
T ss_dssp EE---CHHHHH---HHHHTCCCCCCCCCCCHHHHHHHHHHHTTHH----------HHHHHHHHHHHHHHHHHH-TCTTEE
T ss_pred EE---CHHHHH---HHHHHHHHhCCCCCCCHHHHHHHHHhHhHHH----------HHHHHHHHHHHHHHHHHH-hCCCee
Confidence 55 666443 1344433332 23566667777766776531 222233344444444444 332
Q ss_pred ---CCC-----CcccccCC----cceeeecCCC--HHHHHHhhhcCcEEEcC----------------------------
Q 015283 344 ---SGK-----DWSFILRQ----IGMFSFTGLN--KAQSDNMTNKWHVYMTK---------------------------- 381 (410)
Q Consensus 344 ---~~~-----~~~~~~~~----~~~~~~~~~~--~~~~~~ll~~~gi~v~~---------------------------- 381 (410)
.+. .+++..++ ++++.| .+. .+.+.+++++.||.+..
T Consensus 286 ~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~ 364 (404)
T 1e5e_A 286 KVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKSGFEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREA 364 (404)
T ss_dssp EEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETTHHHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHH
T ss_pred EEECCCCCCCccHHHHHhhCCCCceEEEE-EeCCCHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHh
Confidence 000 12222232 677777 443 24566777777874321
Q ss_pred ----CC--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 382 ----DG--RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 382 ----~g--Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.+ |||++. ++++++++.|+++++.
T Consensus 365 ~g~~~~~iRis~g~---e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 365 AGITDGMIRLSVGI---EDADELIADFKQGLDA 394 (404)
T ss_dssp TTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEeCC---CCHHHHHHHHHHHHHH
Confidence 13 999865 8999999999998765
No 92
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.97 E-value=5.5e-29 Score=234.48 Aligned_cols=331 Identities=11% Similarity=0.031 Sum_probs=225.3
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
.|..|+|..+.+ + +.++.+.+++.+.+.. |.+..|..++++++++++.+.++ .+++++++ ++||+
T Consensus 12 ~p~~i~l~~~~~----~--~~~~~v~~a~~~~~~~-----~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~--~~g~t 76 (359)
T 1svv_A 12 KPKPYSFVNDYS----V--GMHPKILDLMARDNMT-----QHAGYGQDSHCAKAARLIGELLE--RPDADVHF--ISGGT 76 (359)
T ss_dssp ---CEECSCSCS----S--CCCHHHHHHHHHHTTC-----CCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEE--ESCHH
T ss_pred CCeeEEecCCCc----C--CCCHHHHHHHHHHHhh-----ccccccccHHHHHHHHHHHHHhC--CCCccEEE--eCCch
Confidence 356788887654 3 3479999999887642 44455666777777777655444 34678999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhh--hhhhCCCCccceeeecCCCcccChhhHHHHHhcC----CCCcEEEEe
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLH 186 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~~ii~ 186 (410)
+++..+... .+.+||+|++++|+|..+.. .++..|.+++.++. +++.+|++.+++.+++. +.+++++++
T Consensus 77 ~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~ 151 (359)
T 1svv_A 77 QTNLIACSL--ALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPC---PDGKLRVADIESALHENRSEHMVIPKLVYI 151 (359)
T ss_dssp HHHHHHHHH--HCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECC---TTSCCCHHHHHHHHHHSCSTTSCEEEEEEE
T ss_pred HHHHHHHHH--HhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeC---CCCeecHHHHHHHHHHHHhccCCCceEEEE
Confidence 999998443 36799999999999999887 47788999999986 25789999999999762 113677777
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC--CCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG--SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 264 (410)
++| ||||.+++.+++++|+++|++||+++|+||+|.+|..+ +.......+.. ...++..|.+|..++ .+.
T Consensus 152 ~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-----~~d~~~~s~~K~g~~--~~~ 223 (359)
T 1svv_A 152 SNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIAR-----LTDMFYIGATKAGGM--FGE 223 (359)
T ss_dssp ESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHH-----HCSEEEEECTTTTCS--SCE
T ss_pred EcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhh-----cCCEEEEecccCCCC--Cce
Confidence 888 79999999999999999999999999999998443211 11111111111 134677889997442 446
Q ss_pred ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
|++++ ++++++++....... ...+...... ...+..++.+.. +++.+++++++++++.+.|+ ..+
T Consensus 224 g~l~~---~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~l~~~~--------~~~~~~~~~~~~~~l~~~L~-~~~- 288 (359)
T 1svv_A 224 ALIIL---NDALKPNARHLIKQR-GALMAKGWLL-GIQFEVLMKDNL--------FFELGAHSNKMAAILKAGLE-ACG- 288 (359)
T ss_dssp EEEEC---SGGGCTTHHHHHHHT-TCCCTTTHHH-HHHHHHHTSTTH--------HHHHHHHHHHHHHHHHHHHH-HTT-
T ss_pred EEEEE---cccHHHHHHHHHhcC-Ccccccchhh-HHHHHHHHhhhh--------HHHHHHHHHHHHHHHHHHhc-cCC-
Confidence 77643 777666655432111 1111111111 122233455432 24677788888888888886 555
Q ss_pred CCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcC---CC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 345 GKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTK---DG----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+..+.+++|+|+.+..++.+++++++||.+.+ .+ ||+++. .+++++++++++|+++++++
T Consensus 289 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 289 ---IRLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp ---CCBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred ---eEEccCCccceEEEEcCHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 4555567788888877777777887755998754 22 998653 48999999999999988754
No 93
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.97 E-value=1.1e-29 Score=245.20 Aligned_cols=338 Identities=10% Similarity=0.019 Sum_probs=217.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.+....|++ ++.+.+++.+.+.... ...|.+..+..++++++++++.+. .+++|++ ++||
T Consensus 41 ~~~id~~~~~~~~~lg~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~--~~g~ 111 (426)
T 1sff_A 41 REYLDFAGGIAVLNTGHL--HPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGD-----FAKKTLL--VTTG 111 (426)
T ss_dssp CEEEESSHHHHTCTTCBT--CHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCS-----SCEEEEE--ESSH
T ss_pred CEEEEcccChhhcccCCC--CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcc-----cccEEEE--eCch
Confidence 457899888742223442 6889999988875421 124667788999999999997321 1478999 9999
Q ss_pred hhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhh-hhhhCCCC-------------ccceeeec---CCCcccChhhHHHH
Q 015283 112 TGSLRLAAALIER-YFPGAKVLISSPTWGNHKN-IFNDARVP-------------WSEYRYYD---PKTVGLDFEGMIAD 173 (410)
Q Consensus 112 t~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~-~~~~~g~~-------------~~~v~~~~---~~~~~~d~~~l~~~ 173 (410)
++++.++..+... ..+| +|++++|+|.++.. .+...|.+ ++.+++.. ..++.+|++.+++.
T Consensus 112 ~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~ 190 (426)
T 1sff_A 112 SEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRI 190 (426)
T ss_dssp HHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHH
Confidence 9999998654333 3465 89999999987643 44444432 44455521 11244789999998
Q ss_pred HhcC--CCCcEEEEe-CCCCCCCC-CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 174 IKAA--PGGSFILLH-GCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 174 i~~~--~~~~~~ii~-~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
+++. +++++++++ ++++| || .++|.+++++|.++|++||++||+||+|.+|+..+ ....+. ..+....
T Consensus 191 l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~----~~~~~~d 262 (426)
T 1sff_A 191 FKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTG---TLFAME----QMGVAPD 262 (426)
T ss_dssp HHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGG----GTTSCCS
T ss_pred HHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCccc---chhhhh----hcCCCCC
Confidence 8631 124555554 56678 99 78899999999999999999999999999876532 111111 1111222
Q ss_pred EecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 250 ~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
+.||||.++. |+|+||+++ ++++++.+ .......+.+++.+++.++...|+... + ....+++++
T Consensus 263 i~s~sK~~~~-GlriG~~~~---~~~~~~~l----~~~~~~~~~~~~~~~~~a~~aal~~~~------~--~~~~~~~~~ 326 (426)
T 1sff_A 263 LTTFAKSIAG-GFPLAGVTG---RAEVMDAV----APGGLGGTYAGNPIACVAALEVLKVFE------Q--ENLLQKAND 326 (426)
T ss_dssp EEEECGGGGT-SSCCEEEEE---EHHHHTTS----CTTSBCCSSSSCHHHHHHHHHHHHHHH------H--TTHHHHHHH
T ss_pred EEEEcccccC-CCceEEEEE---cHHHHhhh----ccCCcCcCCCCCHHHHHHHHHHHHHHH------h--cCHHHHHHH
Confidence 4499999996 999999865 66644433 221122223456666666654443110 0 123445556
Q ss_pred HHHHHHHHhhhccC--CCCCcccccCCcceeeecCCC-------------HHHHHHhhhcCcEEEcCCC------eEEec
Q 015283 330 VRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKDG------RISLA 388 (410)
Q Consensus 330 ~~~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ll~~~gi~v~~~g------Ris~~ 388 (410)
+++++.+.|+ +++ .+. +....+. |+|+|+.+. .++...+++ +||.+.|++ ||+++
T Consensus 327 ~~~~l~~~l~-~~~~~~~~-~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~iRi~~~ 402 (426)
T 1sff_A 327 LGQKLKDGLL-AIAEKHPE-IGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARD-KGLILLSCGPYYNVLRILVP 402 (426)
T ss_dssp HHHHHHHHHH-HHHHTCTT-EEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHH-TTEECEEESTTSCEEEECCC
T ss_pred HHHHHHHHHH-HHHHhCCC-eEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHH-CCcEEecCCCCCCEEEEECC
Confidence 6666666665 432 111 2223344 677776541 234556655 699998863 99876
Q ss_pred -CCCcccHHHHHHHHHHHhhhc
Q 015283 389 -GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 389 -~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..+++++++++++|+++++++
T Consensus 403 ~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 403 LTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHH
Confidence 458999999999999998754
No 94
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.96 E-value=5e-29 Score=233.88 Aligned_cols=322 Identities=14% Similarity=0.038 Sum_probs=210.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
.+|+|+.+.+ +++++.+++++.+.... ...|.+..+..++|+++++++.. +++++ ++||+++
T Consensus 4 ~~i~~~~~~~------~~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g~--------~~~~~--~~~gt~a 65 (347)
T 1jg8_A 4 MMIDLRSDTV------TKPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFGK--------EAALF--VPSGTMG 65 (347)
T ss_dssp -CEECSCGGG------CCCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHH
T ss_pred eEEEeccccC------CCCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhCC--------ceEEE--ecCcHHH
Confidence 4688988876 33368898888765422 24677788899999999999632 34566 7888998
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcch-h--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCC
Q 015283 115 LRLAAALIERYFPGAKVLISSPTWGNH-K--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGC 188 (410)
Q Consensus 115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~ 188 (410)
+.++ +...+.+||+|++++|+|... . ..+...|++++.+ . .+++.+|++++++.+++. .++++++++++
T Consensus 66 ~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~--~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~ 140 (347)
T 1jg8_A 66 NQVS--IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-P--GKNGAMDPDDVRKAIRPRNIHFPRTSLIAIEN 140 (347)
T ss_dssp HHHH--HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-C--EETTEECHHHHHHHSCCSCTTSCCEEEEEEES
T ss_pred HHHH--HHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-c--CCCCccCHHHHHHHhccccccccCceEEEEec
Confidence 8876 344467999999999998653 3 2566788888777 3 234568999999988641 12578888899
Q ss_pred CCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCCCC--CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcc
Q 015283 189 AHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA--SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 189 p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 265 (410)
|+||| |.+++.+++++|+++|++||+++|+|++|..+. +.+ . ....+....+ .++.|+||.++.+ +|
T Consensus 141 ~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~--~---~~~~~~~~~d--~~~~s~sK~l~~~---~G 210 (347)
T 1jg8_A 141 THNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASG--V---PVKEYAGYAD--SVMFCLSKGLCAP---VG 210 (347)
T ss_dssp SBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHC--C---CHHHHHHTCS--EEEEESSSTTCCS---SC
T ss_pred cccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcC--C---ChHHhccccc--EEEEecccccCCC---ce
Confidence 99999 999999999999999999999999999864211 100 1 1112222223 3345899998743 67
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|+ ++.++++++++....... .. ....+.+.+.++...|+.. .+..+ +..++++.+.+.|+ +++.
T Consensus 211 ~~--~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~---------~~~~~-~~~~~~~~l~~~L~-~~~~- 274 (347)
T 1jg8_A 211 SV--VVGDRDFIERARKARKML-GG-GMRQAGVLAAAGIIALTKM---------VDRLK-EDHENARFLALKLK-EIGY- 274 (347)
T ss_dssp EE--EEECHHHHHHHHHHHHHH-TC-CCSSTHHHHHHHHHHHHHS---------STTHH-HHHHHHHHHHHHHH-HHTC-
T ss_pred EE--EEcCHHHHHHHHHHHHHc-CC-chhHHHHHHHHHHHHHHHH---------HHHHH-HHHHHHHHHHHHHH-hcCc-
Confidence 54 334777666654422211 11 1122333333333333211 01111 22346677788887 6652
Q ss_pred CCccc-ccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 346 KDWSF-ILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 346 ~~~~~-~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+ ..+..+.|+|+.+ +. ++.+++.+ +||.+.+++ |+++. ..+++++++++++|+++++++
T Consensus 275 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 275 ---SVNPEDVKTNMVILRTDNLKVNAHGFIEALRN-SGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp ---BCCGGGCCSSEEEEECTTSSSCHHHHHHHHHH-HTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ---eeccCCCcceEEEEEcccccCCHHHHHHHHHH-CCCEEecCCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 32 2233455666533 23 44566654 699998764 99874 458999999999999998764
No 95
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.96 E-value=7.7e-29 Score=235.14 Aligned_cols=324 Identities=12% Similarity=0.069 Sum_probs=218.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|++.|.+-...++ .++.+.+++.+.+... ....| +..+..++++++++++ |. ++++++ ++||
T Consensus 28 ~~~ld~~~~~~~~~~g~--~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~---~~~v~~--~~g~ 95 (375)
T 2eh6_A 28 KEYLDFVSGIGVNSLGH--AYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT---EGKVFF--ANSG 95 (375)
T ss_dssp CEEEESSHHHHTCTTCB--SCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS---CEEEEE--ESSH
T ss_pred CEEEEcCCcccccccCC--CCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC---CCeEEE--eCch
Confidence 46789999886212232 3688888888776431 12357 5567889999999985 22 378988 9999
Q ss_pred hhHHHHHHHHHH-Hh---CCC-CEEEEcCCCCcchhhhhhhCCCCcc----ceeeecCCCcc----cChhhHHHHHhcCC
Q 015283 112 TGSLRLAAALIE-RY---FPG-AKVLISSPTWGNHKNIFNDARVPWS----EYRYYDPKTVG----LDFEGMIADIKAAP 178 (410)
Q Consensus 112 t~a~~~~~~~~~-~~---~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~----~v~~~~~~~~~----~d~~~l~~~i~~~~ 178 (410)
++++.++...+. .. .+| |+|++++|+|..+...+...+.... ..++. .+.. .|++++++.+++
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~-- 171 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLV--PGFSYAKLNDIDSVYKLLDE-- 171 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCC--SSEEEECTTCHHHHHTTCCT--
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCC--CCceeCCCchHHHHHHHhcC--
Confidence 999999865432 23 678 9999999999988765544332221 11111 1111 488888887764
Q ss_pred CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
+++++++++|+||||.+ .+.+++++|.++|++||+++|+||+|.+++..+ ....+..+ +...+++ ||||.+
T Consensus 172 -~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~-~~~~d~~---s~SK~~ 243 (375)
T 2eh6_A 172 -ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG---EFYAYQHF-NLKPDVI---ALAKGL 243 (375)
T ss_dssp -TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGGG-TCCCSEE---EECGGG
T ss_pred -CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC---cchhhhhc-CCCCCEE---EEcccc
Confidence 67778888899999998 568889999999999999999999999876432 11122111 1123433 888999
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (410)
+ +|+|+||+++ +++++++ +.........+++.+.+.++...|+.. .+.+++++++++++.+.
T Consensus 244 ~-~g~~~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~l~~~ 305 (375)
T 2eh6_A 244 G-GGVPIGAILA---REEVAQS----FTPGSHGSTFGGNPLACRAGTVVVDEV----------EKLLPHVREVGNYFKEK 305 (375)
T ss_dssp G-TTSCCEEEEE---EHHHHTT----CCTTSCCCSSTTCHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH
T ss_pred c-CCCCeEEEEE---cHHHHhh----hcCCCCCCCCCCCHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH
Confidence 9 6999999855 5564333 222111122244566666554444321 25667788888999999
Q ss_pred hhhccCCCCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHh
Q 015283 338 LSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 338 l~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l 406 (410)
|+ +++. ... +..+.|+|+.+ ..++.+.+.+ +||.+.+++ ||+++ ..+++++++++++|++++
T Consensus 306 L~-~~~~----~~~-~~~g~~~~~~~~~~~~~~~~~l~~-~gi~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 306 LK-ELGK----GKV-KGRGLMLGLELERECKDYVLKALE-KGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp HH-HTTS----SEE-EEETTEEEEECSSCCHHHHHHHHH-TTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred HH-HHhc----CCc-eEEEEEEEEEEcCcHHHHHHHHHH-CCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 98 7752 222 33466777654 3456667765 699998753 99876 358999999999998864
No 96
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.96 E-value=1.5e-28 Score=237.36 Aligned_cols=326 Identities=11% Similarity=0.021 Sum_probs=221.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-C-CCccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
...|||+.|.++ +.. .++.+.+++.+.+.. + ....|.. .....++++.+++++. . + +.++
T Consensus 64 ~~~id~~~~~~l---g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g-~------~-~~i~-- 129 (427)
T 2w8t_A 64 KDTILLGTYNYM---GMT-FDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG-T------T-GAIV-- 129 (427)
T ss_dssp EEEEECSCCCTT---CGG-GCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT-C------S-EEEE--
T ss_pred ceEEEEECcccc---cCC-CCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC-C------C-ceEE--
Confidence 467899988642 322 267888888776643 2 1122322 3345889999999962 2 2 3444
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC-CcEEEEe
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG-GSFILLH 186 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~~ii~ 186 (410)
+++|++++..+.. ..+.+||.|+++.|+|..+...++..|.+++.++. .|++.+++.+++.++ +++++++
T Consensus 130 ~~sGs~a~~~al~--~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~ 200 (427)
T 2w8t_A 130 FSTGYMANLGIIS--TLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVL 200 (427)
T ss_dssp ESCHHHHHHHHHH--HHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEE
T ss_pred ecCcHHHHHHHHH--HhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 5778888887633 34679999999999999999999999988887764 589999999976433 5788888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G 265 (410)
++++||||.+.+ +++|.++|++||+++|+||+|..+.++.... ++....+ ..+.+++++|+||.+|++| |
T Consensus 201 ~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~---~~~~~~~~~~~~di~~~s~sK~~g~~g---G 271 (427)
T 2w8t_A 201 EGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGR---GVYEAQGLEGQIDFVVGTFSKSVGTVG---G 271 (427)
T ss_dssp ESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSC---CHHHHTTCTTCCSEEEEESSSTTCSCC---E
T ss_pred cCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC---chHhhcCCCcCCcEEEecchhhhccCC---C
Confidence 999999999887 7788888999999999999999877542111 2222222 2245899999999998776 9
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
|+++ ++++++.+......... ...++...+.++...|+.. ++.++.+++++++++++.+.|+ ++|
T Consensus 272 ~v~~---~~~l~~~l~~~~~~~~~--~~~~~~~~~aa~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~-~~g-- 336 (427)
T 2w8t_A 272 FVVS---NHPKFEAVRLACRPYIF--TASLPPSVVATATTSIRKL-------MTAHEKRERLWSNARALHGGLK-AMG-- 336 (427)
T ss_dssp EEEE---CCTTGGGGGGTCHHHHS--SCCCCHHHHHHHHHHHHHH-------TSCHHHHHHHHHHHHHHHHHHH-HHT--
T ss_pred EEEe---CHHHHHHHHHhcccccc--cCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHH-HcC--
Confidence 9754 67765554332111111 1223333333333333211 1125778889999999999998 776
Q ss_pred CCcccc-cCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC---------C--eEEecC-CCcccHHHHHHHHHHHhh
Q 015283 346 KDWSFI-LRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 346 ~~~~~~-~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~---------g--Ris~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
+.+. ++..+.++|+.+. .++...+++ .||.+.++ + ||+++. .+++++++++++|+++++
T Consensus 337 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~ 413 (427)
T 2w8t_A 337 --FRLGTETCDSAIVAVMLEDQEQAAMMWQALLD-GGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGR 413 (427)
T ss_dssp --CEESCSSCCSSEEEEEESSHHHHHHHHHHHHH-TTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred --CcccCCCCCCCEEEEEECCHHHHHHHHHHHHH-CCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 3444 3313456665442 234566666 49998764 2 888875 489999999999999986
Q ss_pred hc
Q 015283 408 NV 409 (410)
Q Consensus 408 ~~ 409 (410)
++
T Consensus 414 ~~ 415 (427)
T 2w8t_A 414 AV 415 (427)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 97
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.96 E-value=7.2e-28 Score=230.62 Aligned_cols=329 Identities=15% Similarity=0.056 Sum_probs=217.4
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC-----CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
+.+++..+.+ .+.++ +|.+.+++.+.+.. .. ...|+...+..++|+++++++.. +++|++ +
T Consensus 47 ~~i~~~~~~~---~~~~~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~~i~~--~ 113 (401)
T 2bwn_A 47 DITVWCGNDY---LGMGQ-HPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-------EAALVF--S 113 (401)
T ss_dssp EEEECSCSCT---TSGGG-CHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-------SEEEEE--S
T ss_pred cEEEeeCCCc---ccCCC-CHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------CcEEEE--C
Confidence 3566665443 13323 56788888877643 11 12355567889999999999632 467777 6
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCC-CCcEEEEeC
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHG 187 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~ 187 (410)
+|++ ++..+..++....+||.|+++.|+|+.+...++..|++++.++. + |++++++.+.... +++++++++
T Consensus 114 sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~---~----d~~~le~~l~~~~~~~~~~v~~~ 185 (401)
T 2bwn_A 114 SAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH---N----DVAHLRELIAADDPAAPKLIAFE 185 (401)
T ss_dssp CHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT---T----CHHHHHHHHHHSCTTSCEEEEEE
T ss_pred CcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcC---C----CHHHHHHHHHhhccCCceEEEEe
Confidence 5555 66665433333469999999999999999999999999988876 1 6788888887432 367888889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc-CCcEEEEecccccccccCCCcce
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
+|+||||.+++ +++|+++|++||+++|+||+|....+++... ++....+. ...+++++|+||.++++| ||
T Consensus 186 ~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~---~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~ 256 (401)
T 2bwn_A 186 SVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGA---GVAERDGLMHRIDIFNGTLAKAYGVFG---GY 256 (401)
T ss_dssp SBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSC---CHHHHHTCGGGCSEEEEESSSTTCSCC---EE
T ss_pred cCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCc---eeeeccCccccCcEEEeechhhccCCC---CE
Confidence 99999999887 6788888999999999999998544321111 11111111 124788999999999887 99
Q ss_pred EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283 267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 346 (410)
++. ++++++.+......... ....+..++.++...++... ...+++.+++++++++++.+.|+ ++|
T Consensus 257 ~~~---~~~~~~~l~~~~~~~~~--~~~~~~~~~~a~~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~-~~g--- 322 (401)
T 2bwn_A 257 IAA---SARMVDAVRSYAPGFIF--STSLPPAIAAGAQASIAFLK-----TAEGQKLRDAQQMHAKVLKMRLK-ALG--- 322 (401)
T ss_dssp EEE---CHHHHHHHHHHCHHHHT--SBCCCHHHHHHHHHHHHHHT-----SHHHHHHHHHHHHHHHHHHHHHH-HHT---
T ss_pred Eec---CHHHHHHHHHhCcCcee--cCCCCHHHHHHHHHHHHHHH-----hcccHHHHHHHHHHHHHHHHHHH-HCC---
Confidence 754 77766655432111111 12233344444433332110 01135777888999999999998 776
Q ss_pred CcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 347 DWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+..+.++ ++|+.+. .++...+++++||.+.|+ | |++++. .+++++++++++|+++++++
T Consensus 323 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 323 -MPIIDHGSH-IVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp -CCBCCCSSS-CEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred -CcccCCCCC-eEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 355555554 5555442 234556655579998642 2 898873 48899999999999998754
No 98
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=3.6e-29 Score=238.84 Aligned_cols=323 Identities=11% Similarity=0.048 Sum_probs=212.0
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-------
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------- 125 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~------- 125 (410)
+++.+.+++.+.+.... ..+....+..++++++++++.+..+. ++++|++ ++||++++..+...+...
T Consensus 42 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~i~~--~~ggt~a~~~~~~~~~~~~~~~~~~ 116 (397)
T 3f9t_A 42 VLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLNN--KDAYGHI--VSGGTEANLMALRCIKNIWREKRRK 116 (397)
T ss_dssp CCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTTC--TTCEEEE--ESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCC--CCCCEEE--ecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 36888999888775432 22222224455555555554444443 3678888 999999999985554332
Q ss_pred ----CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283 126 ----FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 201 (410)
Q Consensus 126 ----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~ 201 (410)
.+||+|+++.|+|..+...++..|.+++.++. .+++.+|++.+++.+.+. ++.++++++|+||||.+.+
T Consensus 117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~--- 189 (397)
T 3f9t_A 117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPI--KEDYTIDEKFVKDAVEDY--DVDGIIGIAGTTELGTIDN--- 189 (397)
T ss_dssp TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECB--CTTSSBCHHHHHHHHHHS--CCCEEEEEBSCTTTCCBCC---
T ss_pred cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEee--CCCCcCCHHHHHHHHhhc--CCeEEEEECCCCCCCCCCC---
Confidence 14999999999999999999999999999988 345788999999999752 4566677889999999765
Q ss_pred HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHh-----HHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh
Q 015283 202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV-----RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL 276 (410)
Q Consensus 202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~ 276 (410)
+++|.++|++||+++|+||+|.++..+.. .....+ ...... +.++++.|++|.++ +|.|+||+ +++++.+
T Consensus 190 l~~i~~l~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~--~~~~~~~ 264 (397)
T 3f9t_A 190 IEELSKIAKENNIYIHVDAAFGGLVIPFL-DDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGI--LFKDIGY 264 (397)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGTGGGC-CGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEE--EESSGGG
T ss_pred HHHHHHHHHHhCCeEEEEccccchhhhhc-ccccccccccccccccc-cCCeEEEccccccC-CCCCceEE--EEeCHHH
Confidence 67788889999999999999987553211 100000 000112 45688899999875 67899998 4555553
Q ss_pred HHHHHHHHHhhccC--------cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283 277 AARVKSQLKRLARP--------MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 348 (410)
Q Consensus 277 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 348 (410)
.+.+... ...... +....+..++.++...+. ...+++..++++++++++.+.|+ ++++
T Consensus 265 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--------~~~~~~~~~~~~~~~~~l~~~L~-~~g~---- 330 (397)
T 3f9t_A 265 KRYLDVD-APYLTETRQATILGTRVGFGGACTYAVLRYLG--------REGQRKIVNECMENTLYLYKKLK-ENNF---- 330 (397)
T ss_dssp GGGTCEE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-HTTC----
T ss_pred HHhhccC-CccccCCCccccccccccchHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHH-HCCC----
Confidence 3222110 101000 000112233333433332 22346777888899999999998 7763
Q ss_pred ccccCCcceeeecCC-CH-HHHHHhhhcCcEEEcCCC-----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283 349 SFILRQIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG-----RISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 349 ~~~~~~~~~~~~~~~-~~-~~~~~ll~~~gi~v~~~g-----Ris~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
....+..+.++++.. .. ++.+.+.+ +||.+.+++ ||+++. .+++++++++++|+++++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 331 KPVIEPILNIVAIEDEDYKEVCKKLRD-RGIYVSVCNCVKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp CBSSCCSSSEEEEECTTHHHHHHHHHH-TTCBCEECSSSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEEcCCCccEEEEEeCCHHHHHHHHHh-CCeEEeccCCCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 433333344545443 33 44556655 599998874 999874 488999999999999875
No 99
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.96 E-value=1.8e-28 Score=233.04 Aligned_cols=318 Identities=15% Similarity=0.049 Sum_probs=216.2
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
++.++++.+.+++.+.+... ..+.......++++.+++++... .+.+++++ ++||++++. + +...+.+|
T Consensus 9 gp~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~----~~~~~v~~--~~g~t~al~-~--~~~~~~~g 77 (384)
T 3zrp_A 9 GPTTIKEDVLVAGLENNVGF--TSKEFVEALAYSLKGLRYVMGAS----KNYQPLII--PGGGTSAME-S--VTSLLKPN 77 (384)
T ss_dssp SCSCCCHHHHHHTTCCSCCT--TSHHHHHHHHHHHHHHHHHHTCC----TTSEEEEE--ESCHHHHHH-H--GGGGCCTT
T ss_pred CCCCCCHHHHHHhhcccccc--ccHHHHHHHHHHHHHHHHHhCCC----CCCcEEEE--cCCcHHHHH-H--HHhhcCCC
Confidence 44445789998887755321 11222445678888898886432 11277988 999999999 7 34447799
Q ss_pred CEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 129 AKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 129 d~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
|+|++++|+|.+ +...++..|.+++.+++. .++.+|++.+++.+.+ .+++++++++|+||||.+++ +++|.
T Consensus 78 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~ 150 (384)
T 3zrp_A 78 DKILVVSNGVFGDRWEQIFKRYPVNVKVLRPS--PGDYVKPGEVEEEVRK--SEYKLVALTHVETSTGVREP---VKDVI 150 (384)
T ss_dssp CEEEEECSSHHHHHHHHHHTTSSCEEEEECCS--TTCCCCHHHHHHHHHH--SCEEEEEEESEETTTTEECC---HHHHH
T ss_pred CEEEEecCCcchHHHHHHHHHcCCcEEEecCC--CCCCCCHHHHHHHHHh--CCCcEEEEeCCCCCCceECc---HHHHH
Confidence 999999999955 566677889999999873 4567899999999986 25778888999999999887 66788
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH------
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV------ 280 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~------ 280 (410)
++|++||+++|+|++|...... .+ ....+.++++.|+||.++ ++.++||+++ ++++++++
T Consensus 151 ~l~~~~~~~li~D~a~~~~~~~-~~---------~~~~~~d~~~~s~~K~~~-~~~g~g~~~~---~~~~~~~~~~~~~~ 216 (384)
T 3zrp_A 151 NKIRKYVELIVVDGVSSVGAEE-VK---------AEEWNVDVYLTASQKALG-SAAGLGLLLL---SPKALSILDSQNSI 216 (384)
T ss_dssp HHHGGGEEEEEEECTTTTTTSC-CC---------TTTTTCSEEEEETTSTTC-CCSSEEEEEE---CHHHHHHHHHCCCS
T ss_pred HHHHhcCCEEEEECcccccCcc-cc---------ccccCCCEEEecCccccc-CCCceEEEEE---CHHHHHHhcCCCCC
Confidence 8899999999999997643321 11 112236788999999885 2344799865 77776665
Q ss_pred -------HHHHHhhc-----cCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283 281 -------KSQLKRLA-----RPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 347 (410)
Q Consensus 281 -------~~~~~~~~-----~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 347 (410)
........ ..... +++...+.++...+... ....+++.+++++++++++.+.|+ +++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g---- 286 (384)
T 3zrp_A 217 AGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLI-----EKEGIENRIKRHTMVASAIRAGLE-ALG---- 286 (384)
T ss_dssp CCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HTT----
T ss_pred CcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHHHH-HCC----
Confidence 22111111 11112 33433333333333211 012256888899999999999998 776
Q ss_pred cccccCC----cceeeecC---CCHH-HHHHhhhcCcEEEcCCC-------eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 348 WSFILRQ----IGMFSFTG---LNKA-QSDNMTNKWHVYMTKDG-------RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 348 ~~~~~~~----~~~~~~~~---~~~~-~~~~ll~~~gi~v~~~g-------Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+..+. .+.+.++. .+.+ +.+.+.+ +||.+.++. ||++.. .+++++++++++|+++++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~ 363 (384)
T 3zrp_A 287 LEIVARRPESYSNTVTGVILKVADPQKVLAGTVN-EGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRKL 363 (384)
T ss_dssp CCBSCSSGGGBCSSEEEEECSSSCHHHHHHHHHT-TTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CeEccCcccccCccEEEEECCCCCHHHHHHHHHH-CCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHHc
Confidence 3444443 34454443 3444 4556655 599998764 999663 48899999999999998753
No 100
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.96 E-value=1.4e-28 Score=234.71 Aligned_cols=322 Identities=11% Similarity=-0.020 Sum_probs=215.4
Q ss_pred eecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 123 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~ 123 (410)
++|..+..++++.+.+++.+.+.. + ..+....+..++|+++++++.. +++++++ |+||++++.++...+
T Consensus 11 yl~~~~~~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--t~g~t~a~~~~~~~~- 79 (392)
T 2z9v_A 11 ITLTAGPVNAYPEVLRGLGRTVLY-D-YDPAFQLLYEKVVDKAQKAMRL------SNKPVIL--HGEPVLGLEAAAASL- 79 (392)
T ss_dssp EECSSSCCCCCHHHHHHTTSCCCC-T-TSHHHHHHHHHHHHHHHHHTTC------SSCCEEE--SSCTHHHHHHHHHHH-
T ss_pred eeecCCCcCCCHHHHHHHhccccc-c-ccHHHHHHHHHHHHHHHHHhCC------CCCEEEE--eCCchHHHHHHHHHh-
Confidence 344445555689999988776643 1 2222344678999999999632 2578999 999999999984433
Q ss_pred HhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 015283 124 RYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 201 (410)
Q Consensus 124 ~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~ 201 (410)
+.+||+|++++|+|.++ ...++..|.+++.+++. .++.+|++.+++.+++. ++++++++++|+||||.+++
T Consensus 80 -~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~--- 152 (392)
T 2z9v_A 80 -ISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVP--YNEAIDPQAVADMLKAH-PEITVVSVCHHDTPSGTINP--- 152 (392)
T ss_dssp -CCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECC--TTSCCCHHHHHHHHHHC-TTCCEEEEESEEGGGTEECC---
T ss_pred -cCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCC--CCCCCCHHHHHHHHhcC-CCCcEEEEeccCCCCceecc---
Confidence 77999999999999875 34445679999999873 34568999999999642 24567777999999999887
Q ss_pred HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHH
Q 015283 202 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 202 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
+++|.++|++||+++|+|++|.... ... .+ ...+.+++++|+||.+ +++| +||+++ ++++++++
T Consensus 153 l~~i~~l~~~~~~~li~D~a~~~g~---~~~---~~----~~~~~d~~~~s~sK~~~~~~g--~G~l~~---~~~~~~~l 217 (392)
T 2z9v_A 153 IDAIGALVSAHGAYLIVDAVSSFGG---MKT---HP----EDCKADIYVTGPNKCLGAPPG--LTMMGV---SERAWAKM 217 (392)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTBTT---BSC---CG----GGGTCSEEEECSSSTTCCCSC--CEEEEE---CHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcccccCC---ccc---cc----ccccceEEEecCcccccCCCc--eeEEEE---CHHHHHHh
Confidence 5688888999999999999976322 111 11 1113568899999965 4455 499865 77755554
Q ss_pred HHHH--------------Hhh-ccCccc-CCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccC
Q 015283 281 KSQL--------------KRL-ARPMYS-NPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 281 ~~~~--------------~~~-~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.... ... ...... +++..++.++...++. +.+. +++.+++++++++++.+.|+ ++|
T Consensus 218 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~~~~~l~~~L~-~~g 290 (392)
T 2z9v_A 218 KANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDL------YLNEGPEAVWARHALTAKAMRAGVT-AMG 290 (392)
T ss_dssp HTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred hhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH------HHhccHHHHHHHHHHHHHHHHHHHH-HcC
Confidence 3210 000 001112 3333333333333321 1223 56788899999999999998 775
Q ss_pred CCCCccccc-CC---cceeeecC----CCHH-HHHHhhhcCcEEEcCC------C--eEEe-c-CCCcccHHHHHHHHHH
Q 015283 344 SGKDWSFIL-RQ---IGMFSFTG----LNKA-QSDNMTNKWHVYMTKD------G--RISL-A-GLSLAKCEYLADAIID 404 (410)
Q Consensus 344 ~~~~~~~~~-~~---~~~~~~~~----~~~~-~~~~ll~~~gi~v~~~------g--Ris~-~-~~~~~~i~~~~~~l~~ 404 (410)
+.+.. +. .+.++++. .+.. +.++|.+++||.+.++ + ||++ + ..+++++++++++|++
T Consensus 291 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~ 366 (392)
T 2z9v_A 291 ----LSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGG 366 (392)
T ss_dssp ----CCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred ----CeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHH
Confidence 34433 21 34444442 3443 4556665459999875 2 9994 5 4699999999999999
Q ss_pred Hhhhc
Q 015283 405 SYHNV 409 (410)
Q Consensus 405 ~l~~~ 409 (410)
+++++
T Consensus 367 ~~~~~ 371 (392)
T 2z9v_A 367 AMNAA 371 (392)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 98754
No 101
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=8e-29 Score=232.81 Aligned_cols=311 Identities=14% Similarity=0.031 Sum_probs=210.3
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
+..++++.+.+++.+.+... ..|....+..++|+++++++... ++++++ ++||++++.++.. ..+.+|
T Consensus 8 ~p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g~~------~~~i~~--~~g~t~a~~~~~~--~~~~~g 75 (352)
T 1iug_A 8 GPVRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAFRTE------GEVLIL--TGSGTLAMEALVK--NLFAPG 75 (352)
T ss_dssp SSCCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHHTCS------SEEEEE--ESCHHHHHHHHHH--HHCCTT
T ss_pred CCCCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHhCCC------CceEEE--cCchHHHHHHHHH--hccCCC
Confidence 33445799999998876421 22222346789999999997432 578888 9999999999843 336799
Q ss_pred CEEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 129 AKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 129 d~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
|+|++++|+|.++. ..++..|.+++.+++. .++.+|++++++ + +++++++++|+||||.+.+ +++|.
T Consensus 76 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~---~---~~~~v~~~~~~nptG~~~~---l~~i~ 144 (352)
T 1iug_A 76 ERVLVPVYGKFSERFYEIALEAGLVVERLDYP--YGDTPRPEDVAK---E---GYAGLLLVHSETSTGALAD---LPALA 144 (352)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCTTTSCC---S---SCSEEEEESEETTTTEECC---HHHHH
T ss_pred CeEEEEeCCchhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHhc---c---CCcEEEEEEecCCcceecC---HHHHH
Confidence 99999999999875 4456689999999873 345688888866 2 4556777999999999887 56888
Q ss_pred HHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc-ccccCCCcceEEEEeCCchhHHH----
Q 015283 207 DVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-LGLYAERIGAMNVVCSSSDLAAR---- 279 (410)
Q Consensus 207 ~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G~r~G~l~~~~~~~~~~~~---- 279 (410)
++|++| |+++|+|++|.. +.. .. .+ ...+.+++++|+||. ++++| +||+++ +++.+++
T Consensus 145 ~l~~~~~~~~~li~D~a~~~-~~~--~~---~~----~~~~~d~~~~s~~K~~~~~~g--~G~~~~---~~~~~~~~~~~ 209 (352)
T 1iug_A 145 RAFKEKNPEGLVGADMVTSL-LVG--EV---AL----EAMGVDAAASGSQKGLMCPPG--LGFVAL---SPRALERLKPR 209 (352)
T ss_dssp HHHHHHCTTCEEEEECTTTB-TTB--CC---CS----GGGTCSEEEEESSSTTCCCSC--EEEEEE---CHHHHHTCCCC
T ss_pred HHHHhhCCCCEEEEECCccc-cCc--ce---ec----cccCeeEEEecCcccccCCCc--eeEEEE---CHHHHHHhhCC
Confidence 889999 999999999762 211 11 11 111356789999995 44444 699855 6665544
Q ss_pred -----HHHHHHhhc-cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 280 -----VKSQLKRLA-RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 280 -----~~~~~~~~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
+........ .....+++...+.++...++.. .+++++.+++++++++++.+.|+ ++| +.+..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~ 278 (352)
T 1iug_A 210 GYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEV------LPRLEEHLALKAWQNALLYGVGE-EGG----LRPVPK 278 (352)
T ss_dssp SSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH------GGGHHHHHHHHHHHHHHHHHHHH-HTT----CEESCS
T ss_pred CceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Cccccc
Confidence 222111111 1122244444444443333321 11246788889999999999998 775 354444
Q ss_pred C-cceeeecC----CCHH-HHHHhhhcCcEEEcCC------C--eEEecCC-CcccHHHHHHHHHHHhhhc
Q 015283 354 Q-IGMFSFTG----LNKA-QSDNMTNKWHVYMTKD------G--RISLAGL-SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 354 ~-~~~~~~~~----~~~~-~~~~ll~~~gi~v~~~------g--Ris~~~~-~~~~i~~~~~~l~~~l~~~ 409 (410)
. .+.++|+. .+.+ +.+++.+ +||.+.++ + ||+++.. +++++++++++|+++++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 279 RFSPAVAAFYLPEGVPYARVKEAFAQ-RGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp SBCTTCEEEECCTTCCHHHHHHHHHT-TTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEcCCCCCHHHHHHHHHH-CCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 3 45555543 3444 4556655 59999875 2 9998753 6899999999999988754
No 102
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.96 E-value=3.8e-28 Score=234.69 Aligned_cols=346 Identities=12% Similarity=0.044 Sum_probs=201.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|.+....|+. +|.+.+++.+.+... ..|.+..+..+.++++++++....+ .+.++|++ ++||++
T Consensus 29 ~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~--~~gg~e 100 (430)
T 3i4j_A 29 RRYLDGSSGALVANIGHG--RAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWA--VSGGSE 100 (430)
T ss_dssp CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEE--ESSHHH
T ss_pred CEEEECCCchhccccCCC--CHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCcHHH
Confidence 467899988653455543 688999888877542 2232333444555555555444333 23578999 999999
Q ss_pred HHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCCC---------------CccceeeecCCC---cccChhh
Q 015283 114 SLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARV---------------PWSEYRYYDPKT---VGLDFEG 169 (410)
Q Consensus 114 a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~~~---~~~d~~~ 169 (410)
++..+++++... .++|.|++.+|+|.++.......+. .+..++. .+. ...|++.
T Consensus 101 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 178 (430)
T 3i4j_A 101 ATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPK--PDPARNGAEDAEG 178 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECC--CCTTSCHHHHHTH
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCC--CcccchhhHHHHH
Confidence 999986665443 4578999999999887654443332 2222332 111 2236688
Q ss_pred HHHHHhcCC-CCcEEEEeCCCCC-CCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCc
Q 015283 170 MIADIKAAP-GGSFILLHGCAHN-PTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 246 (410)
Q Consensus 170 l~~~i~~~~-~~~~~ii~~~p~N-PtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 246 (410)
+++.+++.+ +.+.++++++++| ++|. +++.+++++|.++|++||+++|+||+|.+|+..+ ..+....+.+..++
T Consensus 179 le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g---~~~~~~~~~~~~~d 255 (430)
T 3i4j_A 179 LRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCG---SPLALSRWSGVTPD 255 (430)
T ss_dssp HHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGGTTTCCCS
T ss_pred HHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhhhhcCCCCc
Confidence 888887422 3556666666677 8886 6678889999999999999999999999887532 12222111022223
Q ss_pred EEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 015283 247 LLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 325 (410)
Q Consensus 247 ~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 325 (410)
++ +|||.++ +| +|+||+++ ++++++.+...........+.+.+.+++.++...|+..+- .+..++.++
T Consensus 256 i~---t~sK~l~-~G~~r~G~~~~---~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~ 324 (430)
T 3i4j_A 256 IA---VLGKGLA-AGYAPLAGLLA---APQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER----EDLTGAAKE 324 (430)
T ss_dssp EE---EECGGGT-TTSSCCEEEEE---CHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH----TTHHHHHHH
T ss_pred EE---EEccccc-CCccccEEEEE---CHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc----ccHHHHHHH
Confidence 33 6899999 59 99999855 8886555443210012222335666777766655542110 111223333
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-C-------------HHHHHHhhhcCcEEEcCC--------C
Q 015283 326 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-N-------------KAQSDNMTNKWHVYMTKD--------G 383 (410)
Q Consensus 326 ~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~ll~~~gi~v~~~--------g 383 (410)
..+..++.+.+.+. .++. +....+. |.|.++.+ + .++.+.+++ +||.+.|+ +
T Consensus 325 ~~~~~~~~l~~~~~-~~~~---~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~~~~ 398 (430)
T 3i4j_A 325 RGAQLLAGLQALQA-RFPQ---MMQVRGT-GLLLGVVLGDLATGQAFETPGIASRIGAAALK-RGLITYPGSGAEPNGRG 398 (430)
T ss_dssp HHHHHHHHHHHHHH-HCTT---EEEEEEE-TTEEEEEEC------------CHHHHHHHHHH-TTEECC-----------
T ss_pred HHHHHHHHHHHHHH-hCCC---eEEEEEE-EEEEEEEeccccccCCCccHHHHHHHHHHHHh-CCCEEEecccccCCCCC
Confidence 33333444444333 3321 2333444 44544432 1 234566665 69999987 2
Q ss_pred ---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 384 ---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 ---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++. .+++++++++++|+++++++
T Consensus 399 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 399 DHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 888762 48999999999999998764
No 103
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.96 E-value=1.3e-28 Score=236.17 Aligned_cols=332 Identities=13% Similarity=0.061 Sum_probs=214.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.+.+..|+. +|.+.+++.+.+.... ...| +.....++++.+++++ + .+++++ ++||
T Consensus 39 ~~~lD~~~~~~~~~lg~~--~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~----~~~v~~--~~gg 105 (406)
T 4adb_A 39 KEYIDFAGGIAVNALGHA--HPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFF--CNSG 105 (406)
T ss_dssp CEEEESSHHHHTCTTCBT--CHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEE--ESSH
T ss_pred CEEEECCCchhhcccCCC--CHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC----C----CCeEEE--eCcH
Confidence 467899988543344543 6889999888775421 1223 3445667777777774 2 358888 9999
Q ss_pred hhHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchhhhhhhCCCCccc----eeeecCCCcc----cChhhHHHHHhcC
Q 015283 112 TGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKNIFNDARVPWSE----YRYYDPKTVG----LDFEGMIADIKAA 177 (410)
Q Consensus 112 t~a~~~~~~~~~~~-----~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~----~d~~~l~~~i~~~ 177 (410)
++++.++..++... .+| |+|++++|+|.++.......+.+... .+. ..+.. .|++.+++.+..
T Consensus 106 ~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~l~~~l~~- 182 (406)
T 4adb_A 106 AEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPL--PADIRHAAYNDINSASALIDD- 182 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSC--CSSEEEECTTCHHHHHTTCST-
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCC--CCCceEeCCCcHHHHHHHhcC-
Confidence 99999986544322 045 99999999999886555444432211 111 01111 478888888763
Q ss_pred CCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283 178 PGGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 255 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 255 (410)
++++++++ |+||||.++ +.+++++|.++|++||+++|+||+|.+++..+ ....... .+...+++ ||||
T Consensus 183 --~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~-~~~~~d~~---t~sK 252 (406)
T 4adb_A 183 --STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG---ELYAYMH-YGVTPDLL---TTAK 252 (406)
T ss_dssp --TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHH-HTCCCSEE---EECG
T ss_pred --CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhHHHHh-cCCCCCEE---Eech
Confidence 67777767 999999988 99999999999999999999999999886532 1222222 22333444 6799
Q ss_pred cccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 256 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 256 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
.++ +|+|+||+++ ++++++. +.........+++.+++.++...|+..+. ++.+++++++++++.
T Consensus 253 ~~~-~G~r~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--------~~~~~~~~~~~~~l~ 316 (406)
T 4adb_A 253 ALG-GGFPVGALLA---TEECARV----MTVGTHGTTYGGNPLASAVAGKVLELINT--------PEMLNGVKQRHDWFV 316 (406)
T ss_dssp GGG-TTSCCEEEEE---CHHHHHT----CCTTSSCCSSTTCHHHHHHHHHHHHHHSS--------HHHHHHHHHHHHHHH
T ss_pred hhc-CCCCeEEEEE---cHHHHhh----hccCCcCCCCCCCHHHHHHHHHHHHHHHh--------cCHHHHHHHHHHHHH
Confidence 999 8999999755 7774443 33333333335666666666555442110 355666777777777
Q ss_pred HHhhhccCCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHH
Q 015283 336 DSLSAKDKSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAII 403 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~ 403 (410)
+.|+ +++.........+..+.+.++.+ +. ++...+++ +||.+.+++ ||+++. .+++++++++++|+
T Consensus 317 ~~l~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~iRi~~~~~~~~e~i~~~~~~l~ 394 (406)
T 4adb_A 317 ERLN-TINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAK-AGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFA 394 (406)
T ss_dssp HHHH-HHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHH-TTEECEESSTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHH-HHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHH-CCcEEeecCCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 7776 54310001111122345555422 23 44566665 599999875 885432 38999999999999
Q ss_pred HHhhhc
Q 015283 404 DSYHNV 409 (410)
Q Consensus 404 ~~l~~~ 409 (410)
++++++
T Consensus 395 ~~l~~~ 400 (406)
T 4adb_A 395 AACEHF 400 (406)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998653
No 104
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=4.6e-29 Score=237.77 Aligned_cols=325 Identities=12% Similarity=0.022 Sum_probs=217.9
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---C---ccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---N---KEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~---~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
+.++|..|.+ + +.++.+.+++.+.+.... . ..|+. ..+..++|+++++++.. ++++|++
T Consensus 16 ~~i~l~~~~~----~--~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~------~~~~v~~-- 81 (390)
T 1elu_A 16 NKTYFNFGGQ----G--ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNV------DPNTITI-- 81 (390)
T ss_dssp TSEECCTTTC----C--CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTS------CGGGEEE--
T ss_pred CeEEecCCcc----C--CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCC------CHHHEEE--
Confidence 4677776653 3 336788888877764310 0 14543 36789999999999632 3578999
Q ss_pred cCChhhHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhh----hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283 108 GLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNI----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 182 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 182 (410)
++||++++..+. ... +.+||+|++++|+|..+... ++..|.+++.+++.+++++.+|++.+++.+++ +++
T Consensus 82 ~~g~t~a~~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~ 156 (390)
T 1elu_A 82 TDNVTTGCDIVL--WGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP---KTR 156 (390)
T ss_dssp ESSHHHHHHHHH--HHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT---TEE
T ss_pred eCChHHHHHHHH--hCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC---Cce
Confidence 999999999983 333 56999999999999997654 45679999988874335678899999988864 678
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHH----HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 183 ILLHGCAHNPTGIDPTPEQWEKIADVIQ----EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~----~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
++++++|+||||.+++ +++|.++|+ ++|+++|+||+|..... .. . ......+++++|+||.+.
T Consensus 157 ~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~---~~---~----~~~~~~d~~~~s~~K~~~ 223 (390)
T 1elu_A 157 LVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSL---PL---D----FSRLEVDYYAFTGHKWFA 223 (390)
T ss_dssp EEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTB---CC---C----TTTSCCSEEEEESSSTTC
T ss_pred EEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCc---CC---C----hhhcCCCEEEcccccccc
Confidence 8888999999999998 667777799 99999999999873221 11 1 112246788999999432
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHh------------------hccCcccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKR------------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 320 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 320 (410)
+|.|+||+++ ++++++++...... .......+++..++.++...++. +.+ ..++
T Consensus 224 -~~~g~G~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--l~~--~~~~ 295 (390)
T 1elu_A 224 -GPAGVGGLYI---HGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQL--HQR--QGTA 295 (390)
T ss_dssp -CCTTCEEEEE---CTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHH--HHH--HCCH
T ss_pred -CCCceEEEEE---CHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHH--HHH--cCCH
Confidence 4567899865 66654443221000 00111223444444433332221 000 0125
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-CCCCCcccc---cCCcceeeec---CCCHH-HHHHhhhcCcEEEcCCC-----eEEe
Q 015283 321 EMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFI---LRQIGMFSFT---GLNKA-QSDNMTNKWHVYMTKDG-----RISL 387 (410)
Q Consensus 321 ~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~---~~~~~~~~~~---~~~~~-~~~~ll~~~gi~v~~~g-----Ris~ 387 (410)
++.+++++++++++.+.|+ ++ | +.+. .+.++++.|- +.+.+ +.+++. ++||.+.+++ ||++
T Consensus 296 ~~~~~~~~~~~~~l~~~L~-~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~iRis~ 369 (390)
T 1elu_A 296 EERYQAICQRSEFLWRGLN-QLPH----VHCLATSAPQAGLVSFTVDSPLGHRAIVQKLE-EQRIYLRTIADPDCIRACC 369 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HSTT----EEESCSSCCSSSEEEEEECSSSCHHHHHHHHH-HTTEECEEETTTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHH-hcCC----cEEecCccccccEEEEEcCCCCCHHHHHHHHH-HCCEEEEecCCCCeEEEec
Confidence 6788889999999999998 76 4 3444 3355655542 22444 455664 5699998762 9997
Q ss_pred c-CCCcccHHHHHHHHHHH
Q 015283 388 A-GLSLAKCEYLADAIIDS 405 (410)
Q Consensus 388 ~-~~~~~~i~~~~~~l~~~ 405 (410)
. ..+++++++++++|+++
T Consensus 370 ~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 370 HYITDEEEINHLLARLADF 388 (390)
T ss_dssp CTTCCHHHHHHHHHHHTTC
T ss_pred ccCCCHHHHHHHHHHHHhh
Confidence 4 35899999999998764
No 105
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.96 E-value=6.7e-28 Score=230.12 Aligned_cols=333 Identities=11% Similarity=0.044 Sum_probs=217.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|++.|.+....|+ .+|.+.+++.+.+... +...+.+..-..++++.+++++. .+++++ ++||+
T Consensus 36 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~v~~--~~~gt 103 (392)
T 3ruy_A 36 NRYMDLLSAYSAVNQGH--RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--------KEMVLP--MNTGA 103 (392)
T ss_dssp CEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--------CSEEEE--ESSHH
T ss_pred CEEEEcCCChhhhccCC--CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--------CCEEEE--eCcHH
Confidence 46789998865223343 2689999988877542 11111234456788888888852 468888 99999
Q ss_pred hHHHHHHHHHHHh--------CCCCEEEEcCCCCcchhhhhhhCCCC-cc---ceeeecC-CC-cccChhhHHHHHhcCC
Q 015283 113 GSLRLAAALIERY--------FPGAKVLISSPTWGNHKNIFNDARVP-WS---EYRYYDP-KT-VGLDFEGMIADIKAAP 178 (410)
Q Consensus 113 ~a~~~~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~---~v~~~~~-~~-~~~d~~~l~~~i~~~~ 178 (410)
+++..+..++... ..||+|+++.|+|.++.......+.. .. ..+.... .. .-.|++.+++.++.
T Consensus 104 ~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 181 (392)
T 3ruy_A 104 EAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITP-- 181 (392)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCT--
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhcc--
Confidence 9999986655333 33689999999997765444332221 00 0010000 00 01278999998874
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
+++++++++|+||||.+++.++ +++|.++|++||+++|+||+|.+++..+ ..+.... .+...+++ |+||.+
T Consensus 182 -~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~-~~~~~d~~---~~SK~l 253 (392)
T 3ruy_A 182 -NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTG---KVFACDW-DNVTPDMY---ILGKAL 253 (392)
T ss_dssp -TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTS---SSSGGGG-GTCCCSEE---EECGGG
T ss_pred -CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccc---cchhhhc-cCCCCCEE---EEchhh
Confidence 7888888999999999997666 9999999999999999999998877532 1112111 12223443 778987
Q ss_pred cccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 258 ~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
+ +| +|+||+++ ++++++. +.........+++.+++.++...|+.. .+ ++.+++++++++++.+
T Consensus 254 ~-gG~~~~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~--~~~~~~~~~~~~~l~~ 317 (392)
T 3ruy_A 254 G-GGVFPISCAAA---NRDILGV----FEPGSHGSTFGGNPLACAVSIAALEVL------EE--EKLTERSLQLGEKLVG 317 (392)
T ss_dssp G-TTTSCCEEEEE---CHHHHTT----CCTTSSCCSSTTCHHHHHHHHHHHHHH------HH--TTHHHHHHHHHHHHHH
T ss_pred h-CChhhhEEEEE---CHHHHhh----hccCCcCCCCCCCHHHHHHHHHHHHHH------Hh--hhHHHHHHHHHHHHHH
Confidence 6 46 99999855 6664333 333333233356666666666555421 11 4677888899999999
Q ss_pred HhhhccCCCCCcccccCCcceeeec--CCCHHHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhh
Q 015283 337 SLSAKDKSGKDWSFILRQIGMFSFT--GLNKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
.|+ +++.+ .+....+.+.++.|. +...++...+. ++||.+.|++ ||++.. .+++++++++++|++++.
T Consensus 318 ~L~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 392 (392)
T 3ruy_A 318 QLK-EIDNP-MITEVRGKGLFIGIELNEPARPYCEQLK-AAGLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVLS 392 (392)
T ss_dssp HHT-TCCCT-TEEEEEEETTEEEEEESSCSHHHHHHHH-TTTEECCCBTTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred HHH-HhcCC-CceEEEeeeeEEEEEEcchHHHHHHHHH-HCCcEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHhC
Confidence 998 77531 123344455544443 22345566666 4799999975 888443 389999999999999863
No 106
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.96 E-value=6e-28 Score=231.80 Aligned_cols=321 Identities=12% Similarity=-0.008 Sum_probs=215.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC--CCcc----CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKE----YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~----y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
...+||+.+.++ +.+. +|.+.+++.+.+... .... |.......++++.+++++.. +..++
T Consensus 59 ~~~ld~~s~~~l---~~~~-~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~-- 124 (409)
T 3kki_A 59 PDDIILQSNDYL---ALAN-HPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGF--------DECLL-- 124 (409)
T ss_dssp TTSEECCCSCTT---CCTT-CHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTC--------SEEEE--
T ss_pred CceEEeeccCcc---CCcC-CHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCC--------CeEEE--
Confidence 457888877653 2222 578888887776431 1112 22234467899999998632 22334
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 187 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~ 187 (410)
+.+|++++..+ +...+.+||.|++++|+|+.+...+...|.+++.++. .|++++++.+.+. ++++++++
T Consensus 125 ~~sGt~a~~~~--l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~--~~~~vi~~ 193 (409)
T 3kki_A 125 SQSGWNANVGL--LQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRH--GPGIIVVD 193 (409)
T ss_dssp ESCHHHHHHHH--HHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHH--CSCEEEEE
T ss_pred ecchHHHHHHH--HHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhc--CCeEEEEC
Confidence 46778888877 3344779999999999999999999999988877764 5899999999752 35777789
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh-cCCcEEEEecccccccccCCCcce
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
+|+||||.+.+ +++|+++|++||++||+||+|..+.++. ... .+....+ ..+.++++.|+||.++.+| ||
T Consensus 194 ~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~-~g~--~~~~~~~~~~~~di~~~s~sK~~~~~g---g~ 264 (409)
T 3kki_A 194 SIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGP-NGA--GLLAELGLTREVHFMTASLAKTFAYRA---GA 264 (409)
T ss_dssp SBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG-GGC--CHHHHHTCGGGCSEEEEESSSTTCSSC---EE
T ss_pred CCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC-CCC--cchhhcCCCCCCCEEEeecchhhCCCc---eE
Confidence 99999999888 7788888999999999999998854431 111 1111111 1234688999999998653 88
Q ss_pred EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283 267 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 346 (410)
++. ++++++.+.......... ...+...+.++...++. .+..++.+++++++++++.+.|+ +++
T Consensus 265 v~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~aal~~-------~~~~~~~~~~~~~~~~~l~~~L~-~~g--- 328 (409)
T 3kki_A 265 IWC---NNEVNRCVPFISYPAIFS--STLLPYEAAGLETTLEI-------IESADNRRQHLDRMARKLRIGLS-QLG--- 328 (409)
T ss_dssp EEE---SSSGGGTHHHHCHHHHHS--BCCCHHHHHHHHHHHHH-------HHHCHHHHHHHHHHHHHHHHHHH-TTT---
T ss_pred EEE---CHHHHHHHHHhCcCcccc--CCCcHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHH-HcC---
Confidence 754 777666655432222111 12333333333333321 11125778889999999999999 886
Q ss_pred CcccccCCcceeeecCC-----CHHHHHHhhhcCcEEEcC-------CC----eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 347 DWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTK-------DG----RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 347 ~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~-------~g----Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
+.+. ..+.++|+.+ ..++.++++++ ||.+.+ .+ ||+++. .+++++++++++|+++++.
T Consensus 329 -~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 329 -LTIR--SESQIIGLETGDERNTEKVRDYLESN-GVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp -CCCC--CSSSEEEEEEESHHHHHHHHHHHHHT-TEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CccC--CCCCEEEEEeCCHHHHHHHHHHHHHC-CceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 3433 2455666543 12346667664 999843 22 999864 4889999999999999865
No 107
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.96 E-value=2.5e-28 Score=229.82 Aligned_cols=326 Identities=14% Similarity=0.019 Sum_probs=221.3
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
++.+|+|+.+.+ .. .++.+.+++.+.... +...|.+.....++++.+++++. . +.++++ ++||+
T Consensus 6 ~~~~id~~~~~~----~~--~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g-~------~~~v~~--~~~gt 69 (356)
T 1v72_A 6 RPPALGFSSDNI----AG--ASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIFE-R------DVEVFL--VPTGT 69 (356)
T ss_dssp CCCCCBCSCGGG----CC--CCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHHT-S------CCEEEE--ESCHH
T ss_pred CCceEeeccCCc----cC--CCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHhC-C------CCcEEE--eCCcc
Confidence 467889998765 32 368999999887632 23556555566788888888853 1 346888 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh--hhhC--CCCccceeeecCCCcccChhhHHH-HHhcC----CCCcEE
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNHKNI--FNDA--RVPWSEYRYYDPKTVGLDFEGMIA-DIKAA----PGGSFI 183 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~--~~~~--g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~----~~~~~~ 183 (410)
+++.++. .....+||.|+++.|+|..+... +... |.+++.++.. ++.+|++++++ .+++. ++++++
T Consensus 70 ~a~~~al--~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~ 144 (356)
T 1v72_A 70 AANALCL--SAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPAC 144 (356)
T ss_dssp HHHHHHH--HTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEE
T ss_pred HHHHHHH--HHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceE
Confidence 9998873 33356999999999999876655 6666 8888888762 36789999999 88641 125677
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCC--CCCCCchhHhHHHhhcCCcEEEEecccccccccC
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 261 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 261 (410)
+++++|+| ||.+++.+++++|+++|++||+++|+|++|..+.. .+....... .....+ +++.|+||. +
T Consensus 145 v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~~~d-~~~~s~sK~-g--- 214 (356)
T 1v72_A 145 VSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMT----WKAGVD-ALSFGATKN-G--- 214 (356)
T ss_dssp EEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTT----GGGTCC-EEEECCGGG-T---
T ss_pred EEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhh----hhhcCC-EEEEecccC-C---
Confidence 77788887 99999999999999999999999999999864321 001111000 011223 445699998 3
Q ss_pred CCcc--eEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 262 ERIG--AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 262 ~r~G--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
.|+| |+ ..++++++++..... .. .........++..+...+.+.. | .+..++++++++++.+.|+
T Consensus 215 ~~~G~g~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~----~----~~~~~~~~~~~~~l~~~L~ 281 (356)
T 1v72_A 215 VLAAEAIV---LFNTSLATEMSYRRK-RA-GHLSSKMRFLSAQIDAYLTDDL----W----LRNARKANAAAQRLAQGLE 281 (356)
T ss_dssp CSSCEEEE---ESSGGGHHHHHHHHH-HT-TCCCSSTHHHHHHHHHHTSTTH----H----HHHHHHHHHHHHHHHHHHT
T ss_pred CcCccEEE---EECHHHHhhHHHHhh-cc-CchhhhHHHHHHHHHHHHHhhh----H----HHHHHHHHHHHHHHHHHHh
Confidence 3566 64 337787776654322 11 1111222333333445555432 2 2456667788889999998
Q ss_pred hcc-CCCCCcccccCCcceeeecCCCHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 340 AKD-KSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 340 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
++ | +++..+..++++|+.+..++..++.+ +||.+.+| + ||++.. .+++++++++++|++++++
T Consensus 282 -~~~g----~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 282 -GLGG----VEVLGGTEANILFCRLDSAMIDALLK-AGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp -TCTT----EEEESCCCSSEEEEEECHHHHHHHHH-TTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred -hCCC----cEEccCCCccEEEEEcCHHHHHHHHh-cCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 75 4 45555667788888776667777765 69999864 3 998653 4889999999999998765
No 108
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.96 E-value=3e-28 Score=233.25 Aligned_cols=325 Identities=10% Similarity=0.084 Sum_probs=222.2
Q ss_pred CCCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CC---CccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 33 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE---NKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 33 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
+...|||+.|.+ .+++ .++.+.+++.+.+.. +. ...|. ...+..++++++++++. . ++.+++
T Consensus 44 g~~~id~~~~~~---~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~------~~~i~~- 111 (401)
T 1fc4_A 44 GSHVINFCANNY---LGLA-NHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG-M------EDAILY- 111 (401)
T ss_dssp SCEEEECCCSCT---TSCT-TCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT-C------SEEEEE-
T ss_pred CccEEEeeccCc---cccc-CCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC-C------CcEEEe-
Confidence 356899998854 2321 268888888776643 21 01332 25678899999999972 1 244544
Q ss_pred ecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCC---CcEE
Q 015283 107 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFI 183 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~---~~~~ 183 (410)
.+|++++..+. ...+.+||.|+++.|+|+.+...++..|.+++.++. .|++++++.+++.++ ++++
T Consensus 112 --~sGs~a~~~~~--~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~ 180 (401)
T 1fc4_A 112 --SSCFDANGGLF--ETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVL 180 (401)
T ss_dssp --SCHHHHHHTTH--HHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEE
T ss_pred --CChHHHHHHHH--HHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceE
Confidence 66788888763 334679999999999999888888888988887763 478888888764211 5677
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhh-cCCcEEEEecccccc-ccc
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNL-GLY 260 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~-~~~ 260 (410)
+++++|+||||.+++ +++|.++|+++|+++|+||+|. ++.... ... +....+ ..+.+++++|+||.+ +++
T Consensus 181 v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~--g~~--~~~~~~~~~~~di~~~s~sK~~~~~~ 253 (401)
T 1fc4_A 181 IATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGEN--GRG--SHEYCDVMGRVDIITGTLGKALGGAS 253 (401)
T ss_dssp EEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTT--SCC--HHHHTTCTTCCSEEEEESSSTTCSSS
T ss_pred EEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCC--CCc--cHHHcCCCcCCcEEEecchhhccCCC
Confidence 888999999999888 7788888999999999999995 765311 111 111112 124579999999999 544
Q ss_pred CCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015283 261 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 340 (410)
Q Consensus 261 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 340 (410)
| ||+++ ++++++.+........ ...+++..++.++...|+.. +..++.+++++++++++.+.|+
T Consensus 254 g---G~~~~---~~~~~~~l~~~~~~~~--~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~- 317 (401)
T 1fc4_A 254 G---GYTAA---RKEVVEWLRQRSRPYL--FSNSLAPAIVAASIKVLEMV-------EAGSELRDRLWANARQFREQMS- 317 (401)
T ss_dssp C---EEEEE---CHHHHHHHHHHCHHHH--HSCCCCHHHHHHHHHHHHHH-------HTCHHHHHHHHHHHHHHHHHHH-
T ss_pred C---EEEEc---CHHHHHHHHHhCcCce--eCCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHH-
Confidence 4 99754 7786666554321111 12245666666655444321 1125677888999999999998
Q ss_pred ccCCCCCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCC-------C----eEEecC-CCcccHHHHHHHHH
Q 015283 341 KDKSGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAII 403 (410)
Q Consensus 341 ~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~-------g----Ris~~~-~~~~~i~~~~~~l~ 403 (410)
++| +.+. +..+.|+|+.+. .++.+.+.+ +||.+.++ + ||+++. .+++++++++++|+
T Consensus 318 ~~g----~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 391 (401)
T 1fc4_A 318 AAG----FTLA-GADHAIIPVMLGDAVVAQKFARELQK-EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFT 391 (401)
T ss_dssp HTT----CCBC-CSSSSEEEEEEECHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HcC----Cccc-CCCCCEEEEEcCChHHHHHHHHHHHH-CCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 776 3444 445667776542 234556655 59998764 1 899873 48999999999999
Q ss_pred HHhhhc
Q 015283 404 DSYHNV 409 (410)
Q Consensus 404 ~~l~~~ 409 (410)
++++++
T Consensus 392 ~~~~~~ 397 (401)
T 1fc4_A 392 RIGKQL 397 (401)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998764
No 109
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.96 E-value=1.5e-28 Score=235.02 Aligned_cols=325 Identities=12% Similarity=0.103 Sum_probs=212.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|++.|..-+..|+ .+|.+.+++.+.+..... ..| +.....++++.+++++ + .+++++ ++||
T Consensus 40 ~~~ld~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~gg 106 (397)
T 2ord_A 40 NAYLDFTSGIAVNVLGH--SHPRLVEAIKDQAEKLIHCSNLF-WNRPQMELAELLSKNT----F----GGKVFF--ANTG 106 (397)
T ss_dssp CEEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCSCCCTTS-EEHHHHHHHHHHHHTT----T----SCEEEE--ESSH
T ss_pred CEEEECCccccccccCC--CCHHHHHHHHHHHHhcccCcccc-CCHHHHHHHHHHHHhc----C----CCeEEE--eCCH
Confidence 45789988743122343 268888888877644211 123 3344567777777764 2 478888 9999
Q ss_pred hhHHHHHHHHHHHhC----C-CCEEEEcCCCCcch-hhhhhhCCCC------------ccceeeecCCCcccChhhHHHH
Q 015283 112 TGSLRLAAALIERYF----P-GAKVLISSPTWGNH-KNIFNDARVP------------WSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 112 t~a~~~~~~~~~~~~----~-gd~Vl~~~p~y~~~-~~~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
++++..+...+..+. + ++.|++++|+|.+. ...+...|.+ +..++. .|++.+++.
T Consensus 107 ~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~ 179 (397)
T 2ord_A 107 TEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRK 179 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHH
Confidence 999999865443221 4 47899999999654 4366666665 333332 388999988
Q ss_pred HhcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 174 IKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
+++ +++++++++|+||||. +++.+++++|+++|++||+++|+||+|.+++..+ ....+..+ +...+++ |
T Consensus 180 l~~---~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~~-~~~~d~~---s 249 (397)
T 2ord_A 180 MSE---DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG---KLFAYQKY-GVVPDVL---T 249 (397)
T ss_dssp CCT---TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSHHHHH-TCCCSEE---E
T ss_pred hhc---CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc---cchhhhhh-CCCCCee---e
Confidence 864 6788888999999999 9999999999999999999999999998776432 12222222 2222333 8
Q ss_pred ccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283 253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 332 (410)
Q Consensus 253 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (410)
|||.++ +|+|+||+++ +++++ . +.........+++.+++.++...|+..+ + ++.+++++++++
T Consensus 250 ~sK~~~-~G~r~G~~~~---~~~~~-~----l~~~~~~~~~~~~~~~~~a~~~~l~~~~------~--~~~~~~~~~~~~ 312 (397)
T 2ord_A 250 TAKGLG-GGVPIGAVIV---NERAN-V----LEPGDHGTTFGGNPLACRAGVTVIKELT------K--EGFLEEVEEKGN 312 (397)
T ss_dssp ECGGGG-TTSCCEEEEE---CSTTC-C----CCTTSSCCSSTTCHHHHHHHHHHHHHHT------S--TTHHHHHHHHHH
T ss_pred eccccC-CCcCeEEEEE---chHhc-c----cCCCCcCCCCCCCHHHHHHHHHHHHHHH------h--CCHHHHHHHHHH
Confidence 899999 8999999854 55533 2 2211122223456666666655543211 0 245677778888
Q ss_pred HHHHHhhhcc--CCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHH
Q 015283 333 KLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLAD 400 (410)
Q Consensus 333 ~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~ 400 (410)
++.+.|+ ++ +.+. +....+ .+.|+++.+ +. ++.+.+++ +||.+.|++ ||+++ ..++++++++++
T Consensus 313 ~l~~~L~-~~~~~~~~-~~~~~~-~g~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~iRis~~~~~~~e~i~~~~~ 388 (397)
T 2ord_A 313 YLMKKLQ-EMKEEYDV-VADVRG-MGLMIGIQFREEVSNREVATKCFE-NKLLVVPAGNNTIRFLPPLTVEYGEIDLAVE 388 (397)
T ss_dssp HHHHHHH-HHHHHCTT-EEEEEE-ETTEEEEEECTTSCHHHHHHHHHH-TTEECEEETTTEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHHHH-HHHHhCCc-eEEEEE-EeEEEEEEECChHHHHHHHHHHHH-CCCEEccCCCCEEEEECCcCCCHHHHHHHHH
Confidence 8888887 65 2210 111223 345555433 23 34566665 799999874 88854 348999999999
Q ss_pred HHHHHhhhc
Q 015283 401 AIIDSYHNV 409 (410)
Q Consensus 401 ~l~~~l~~~ 409 (410)
+|+++++++
T Consensus 389 ~l~~~l~~~ 397 (397)
T 2ord_A 389 TLKKVLQGI 397 (397)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhhC
Confidence 999998753
No 110
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=4.6e-28 Score=231.25 Aligned_cols=333 Identities=11% Similarity=0.078 Sum_probs=220.0
Q ss_pred hHhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCC-ceE
Q 015283 26 EAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVA 104 (410)
Q Consensus 26 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~i~ 104 (410)
.++....++..+++..|. .++++.+.+++.+.+.... ..+ +..+..++++.+++++... ++ +++
T Consensus 10 ~~~~~~~~~~~~~~~~g~-------~~~~~~v~~a~~~~~~~~~-~~~-~~~~~~~l~~~la~~~g~~------~~~~i~ 74 (393)
T 2huf_A 10 VLREPLVTPNKLLMGPGP-------SNAPQRVLDAMSRPILGHL-HPE-TLKIMDDIKEGVRYLFQTN------NIATFC 74 (393)
T ss_dssp GGGSCCCCCCCEECSSSC-------CCCCHHHHHHTTSCCCCTT-SHH-HHHHHHHHHHHHHHHHTCC------CSEEEE
T ss_pred hhhcccCCCCeEEecCCC-------CCCCHHHHHHHHhhhccCC-CHH-HHHHHHHHHHHHHHHhCCC------CCcEEE
Confidence 344444455566665553 2347889988877654311 111 3456789999999997432 43 788
Q ss_pred EEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283 105 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 182 (410)
Q Consensus 105 ~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 182 (410)
+ ++||++++.++... .+.+||+|++++|+|.++. ..++..|.+++.+++. .++.+|++.+++.+++. +++
T Consensus 75 ~--~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~ 146 (393)
T 2huf_A 75 L--SASGHGGMEATLCN--LLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSK--VGQSLSLDEIRDALLIH--KPS 146 (393)
T ss_dssp E--SSCHHHHHHHHHHH--HCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHH--CCS
T ss_pred E--cCcHHHHHHHHHHH--HhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCC--CCCCCCHHHHHHHHhcc--CCc
Confidence 8 99999999998443 3679999999999998743 3456689999999873 34678999999998741 355
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc-ccccC
Q 015283 183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-LGLYA 261 (410)
Q Consensus 183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G 261 (410)
++++++|+||||.+++ +++|.++|++||+++|+|+++. ++.. .. .+ ...+.++++.|+||. +|++|
T Consensus 147 ~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~-~~~~--~~---~~----~~~~~d~~~~s~sK~l~g~~G 213 (393)
T 2huf_A 147 VLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVAS-LGGA--PM---FM----DRWEIDAMYTGSQKVLGAPPG 213 (393)
T ss_dssp EEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT-BTTB--CC---CT----TTTTCSEEECCSSSTTCCCSS
T ss_pred EEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEcccc-cCCC--Cc---ch----hhcCccEEEECCCcccccCCC
Confidence 6667899999999888 6677888999999999999964 3311 11 11 122467889999997 46677
Q ss_pred CCcceEEEEeCCchhHHHHHHH---HHhhc----------------cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 015283 262 ERIGAMNVVCSSSDLAARVKSQ---LKRLA----------------RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 322 (410)
Q Consensus 262 ~r~G~l~~~~~~~~~~~~~~~~---~~~~~----------------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 322 (410)
+ ||+++ ++++++++... ..... .....+++..++.++...++.. . .+.+++
T Consensus 214 ~--G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~---~~~~~~ 283 (393)
T 2huf_A 214 I--TPVSF---SHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMA--C---EEGLPA 283 (393)
T ss_dssp C--EEEEE---CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHH--H---HHCHHH
T ss_pred e--EEEEE---CHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHH--H---HhCHHH
Confidence 6 89855 67765554432 00000 1111233444433333333211 0 112567
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCC---cceeeec----CCCH-HHHHHhhhcCcEEEcCC------C--eEE
Q 015283 323 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ---IGMFSFT----GLNK-AQSDNMTNKWHVYMTKD------G--RIS 386 (410)
Q Consensus 323 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~---~~~~~~~----~~~~-~~~~~ll~~~gi~v~~~------g--Ris 386 (410)
.+++++++++++.+.|+ ++| +.+..+. .++++++ +.+. ++..+|++++||.+.++ + ||+
T Consensus 284 ~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~ 358 (393)
T 2huf_A 284 LIARHEDCAKRLYRGLQ-DAG----FELYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIG 358 (393)
T ss_dssp HHHHHHHHHHHHHHHHH-HTT----CCBSSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHH-HcC----CeeccCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEE
Confidence 78888999999999998 776 3444332 3334443 2344 44566666569999875 2 999
Q ss_pred e-cC-CCcccHHHHHHHHHHHhhhc
Q 015283 387 L-AG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 387 ~-~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+ +. .+++++++++++|+++++++
T Consensus 359 ~~~~~~~~e~i~~~~~~l~~~~~~~ 383 (393)
T 2huf_A 359 LMGQNATTERVDRVLQVFQEAVAAV 383 (393)
T ss_dssp CCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHc
Confidence 8 53 36788999999999998753
No 111
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.96 E-value=1.6e-28 Score=234.62 Aligned_cols=313 Identities=10% Similarity=0.085 Sum_probs=213.0
Q ss_pred cccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 52 YVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 52 ~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
.+++.+.+++.+.... .|.+ .....++|+++++++... ++ ++++ ++||++++..+... .+.+|
T Consensus 28 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~~~------~~~~v~~--~~g~t~al~~~~~~--~~~~g 93 (396)
T 2ch1_A 28 NCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIFQTE------NRATMCV--SGSAHAGMEAMLSN--LLEEG 93 (396)
T ss_dssp CCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHHTCC------CSCEEEE--SSCHHHHHHHHHHH--HCCTT
T ss_pred CCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHhCCC------CCcEEEE--CCcHHHHHHHHHHH--hcCCC
Confidence 3578888887665422 2433 234789999999997543 45 7888 99999999998433 37799
Q ss_pred CEEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 129 AKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 129 d~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
|+|++++|+|..+. ..++..|.+++.++. +.++.+|++++++.+++. +++++++++|+||||.+++ +++|.
T Consensus 94 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---~~~i~ 166 (396)
T 2ch1_A 94 DRVLIAVNGIWAERAVEMSERYGADVRTIEG--PPDRPFSLETLARAIELH--QPKCLFLTHGDSSSGLLQP---LEGVG 166 (396)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEEC--CTTSCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CTTHH
T ss_pred CeEEEEcCCcccHHHHHHHHHcCCceEEecC--CCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCceecC---HHHHH
Confidence 99999999999985 467888999999987 345679999999998741 3556677899999999988 56777
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH---
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ--- 283 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~--- 283 (410)
++|+++|+++|+||+|. ++.. .. .+ ...+.++++.|++|.++ ++.++|++++ +++.++.+...
T Consensus 167 ~l~~~~~~~li~Dea~~-~g~~--~~---~~----~~~~~d~~~~s~~K~~~-~~~g~g~~~~---~~~~~~~~~~~~~~ 232 (396)
T 2ch1_A 167 QICHQHDCLLIVDAVAS-LCGV--PF---YM----DKWEIDAVYTGAQKVLG-APPGITPISI---SPKALDVIRNRRTK 232 (396)
T ss_dssp HHHHHTTCEEEEECTTT-BTTB--CC---CT----TTTTCCEEECCCC-CCC-CCSSCEEEEE---CHHHHHHHHTCSSC
T ss_pred HHHHHcCCEEEEEcccc-ccCC--cc---ch----hhcCcCEEEEcCCcccc-CCCCeEEEEE---CHHHHHhhhhccCc
Confidence 78999999999999987 3321 11 11 11223566789999765 2345688755 66755554321
Q ss_pred ----H------Hh-h-----ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015283 284 ----L------KR-L-----ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 347 (410)
Q Consensus 284 ----~------~~-~-----~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 347 (410)
. +. . ......+++..++.++...|+.. ..+.+++.+++++++++++.+.|+ ++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g---- 302 (396)
T 2ch1_A 233 SKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQI-----AEEGLENQIKRRIECAQILYEGLG-KMG---- 302 (396)
T ss_dssp CSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HHT----
T ss_pred ccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHH-HCC----
Confidence 0 00 0 01122245555555554444321 123356788899999999999998 876
Q ss_pred cccccCCcc----eeeec----CCCH-HHHHHhhhcCcEEEcCC------C--eEEe-c-CCCcccHHHHHHHHHHHhhh
Q 015283 348 WSFILRQIG----MFSFT----GLNK-AQSDNMTNKWHVYMTKD------G--RISL-A-GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 348 ~~~~~~~~~----~~~~~----~~~~-~~~~~ll~~~gi~v~~~------g--Ris~-~-~~~~~~i~~~~~~l~~~l~~ 408 (410)
+.+..+.++ .++++ +.+. ++.++|++++||.+.++ + ||++ + ..+++++++++++|++++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 303 LDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp CCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CeeccCCccccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence 344444432 24443 2344 44566766569999875 2 9998 3 34788999999999999875
Q ss_pred c
Q 015283 409 V 409 (410)
Q Consensus 409 ~ 409 (410)
+
T Consensus 383 ~ 383 (396)
T 2ch1_A 383 T 383 (396)
T ss_dssp H
T ss_pred h
Confidence 3
No 112
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=6.1e-28 Score=232.70 Aligned_cols=327 Identities=14% Similarity=0.093 Sum_probs=216.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhc--cCCCc----c----CcCCcccHHHHHHHHHHhcCCCCCcccCCce
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE--RGENK----E----YLPIEGLAAFNKVTAELLFGADNSVLKEQRV 103 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~----~----y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i 103 (410)
++.+.|..+.+ .++++.+.+++.+.+. ..... . |.......++++.+++++.. +++++
T Consensus 21 ~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~------~~~~v 88 (423)
T 3lvm_A 21 KLPIYLDYSAT------TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGA------DPREI 88 (423)
T ss_dssp CSSEECBTTTC------CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTC------CGGGE
T ss_pred CCCEeecCCCc------CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCC------CCCeE
Confidence 45666664443 3457999999988765 21100 1 11223457888888888643 26789
Q ss_pred EEEecCChhhHHHHHHHHHHH-hC-CCCEEEEcCCCCcchhhhh---hhCCCCccceeeecCCCcccChhhHHHHHhcCC
Q 015283 104 ATVQGLSGTGSLRLAAALIER-YF-PGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 104 ~~~~t~ggt~a~~~~~~~~~~-~~-~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
++ ++||++|+.++...+.. +. +||+|+++.|+|+++...+ ...|.+++.++.. .++.+|++.+++.+.+
T Consensus 89 ~~--~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-- 162 (423)
T 3lvm_A 89 VF--TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ--RNGIIDLKELEAAMRD-- 162 (423)
T ss_dssp EE--ESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHCCT--
T ss_pred EE--eCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC--CCCccCHHHHHHhcCC--
Confidence 99 99999999998554422 23 7999999999999987766 4559999999873 4677899999999875
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
++.++++++|+||||.+++ +++|+++|++||++||+||+|...... . . ....+.++++.|+||.+|
T Consensus 163 -~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-~-----~----~~~~~~di~~~s~sK~~g 228 (423)
T 3lvm_A 163 -DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP-I-----D----LSQLKVDLMSFSGHKIYG 228 (423)
T ss_dssp -TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC-C-----C----TTTSCCSEEEEESTTTTS
T ss_pred -CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-c-----C----hhhcCCCEEEechHHhcC
Confidence 6788889999999999988 667888899999999999997653321 1 1 112235688999999888
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhh--c-cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRL--A-RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
++| +||+++ +++..+.+....... . ......++...+.++...+.. +.+.+++.+++++++++++.
T Consensus 229 ~~g--~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~ 297 (423)
T 3lvm_A 229 PKG--IGALYV---RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI------AKEEMATEMERLRGLRNRLW 297 (423)
T ss_dssp CSS--CEEEEE---CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH
T ss_pred CCC--eEEEEE---eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 766 799855 544322221110000 0 011123334333333333321 12335788899999999999
Q ss_pred HHhhhccCCCCCcccccCCc----cee-ee-cCCCHHHHHHhhhcCcEEEcCC-------------------------C-
Q 015283 336 DSLSAKDKSGKDWSFILRQI----GMF-SF-TGLNKAQSDNMTNKWHVYMTKD-------------------------G- 383 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~----~~~-~~-~~~~~~~~~~ll~~~gi~v~~~-------------------------g- 383 (410)
+.|+ +++. +.+..+.. +++ ++ .+.+.+.+.+.+.+ |.+.+| +
T Consensus 298 ~~L~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (423)
T 3lvm_A 298 NGIK-DIEE---VYLNGDLEHGAPNILNVSFNYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSS 371 (423)
T ss_dssp HHHT-TSTT---EEEESCSTTBCTTEEEEEETTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTE
T ss_pred HHHh-cCCC---EEEeCCccccCCCeEEEEeCCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCce
Confidence 9998 7731 34443332 222 22 24455555555554 777664 3
Q ss_pred -eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 384 -RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 -Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++. .+++++++++++|+++++++
T Consensus 372 iRi~~~~~~t~e~i~~~~~~l~~~~~~~ 399 (423)
T 3lvm_A 372 IRFSLGRFTTEEEIDYTIELVRKSIGRL 399 (423)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999874 47899999999999998653
No 113
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.96 E-value=1.9e-28 Score=232.78 Aligned_cols=320 Identities=13% Similarity=0.033 Sum_probs=213.3
Q ss_pred eecCCCcccccHHHHHHHHHhhccCC---CccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283 44 YRTEELQPYVLDVVKKAENLMLERGE---NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 116 (410)
Q Consensus 44 ~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~ 116 (410)
++|..+.+++++.+++++.+.+.... ...|.. .....++++++++++.. +++++++ |+||++++.
T Consensus 3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--~~g~t~a~~ 74 (382)
T 4eb5_A 3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG------GGGTVVF--TSGATEANN 74 (382)
T ss_dssp BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTC------TTEEEEE--ESSHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--cCchHHHHH
Confidence 35555666678999999988764311 012432 24678899999998642 2578988 999999999
Q ss_pred HHHHHHHH--hCCCCEEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 117 LAAALIER--YFPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 117 ~~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++...+.. ..+||+|++++|+|+.+...+. ..|++++.+++. +++.+|++.+++.+++ +++++++++|+|
T Consensus 75 ~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~~~n 149 (382)
T 4eb5_A 75 LAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRD---DTILVSVQHANN 149 (382)
T ss_dssp HHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBC--TTSCBCHHHHHHHCCT---TEEEEECCSBCT
T ss_pred HHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccC--CCCccCHHHHHHHhcC---CCeEEEEeccCC
Confidence 98554421 1699999999999998866654 478899888873 4567899999999875 678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+++ +++|.++|++||++ |+|++|. ++. ... .+.. .+.+++++|+||.+|++| +||+++
T Consensus 150 ptG~~~~---l~~i~~l~~~~~~~-i~D~a~~-~g~--~~~---~~~~----~~~di~~~s~sK~~g~~g--~G~~~~-- 211 (382)
T 4eb5_A 150 EIGTIQP---VEEISEVLAGKAAL-HIDATAS-VGQ--IEV---DVEK----IGADMLTISSNDIYGPKG--VGALWI-- 211 (382)
T ss_dssp TTCBBCC---HHHHHHHHTTSSEE-EEECTTT-BTT--BCC---CHHH----HTCSEEEEETGGGTCCSS--CEEEEE--
T ss_pred CccccCC---HHHHHHHHHHCCCE-EEEcchh-cCC--ccc---Cccc----cCCCEEEeehHHhcCCCc--eEEEEE--
Confidence 9999887 56788889999999 9999987 321 111 1111 135688999999988666 688854
Q ss_pred CCchhHHHHHHHHHh---hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283 272 SSSDLAARVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 348 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 348 (410)
+++. .+...... .......+++...+.++...++. +.+.+++.+++++++++++.+.|+ +++ + +
T Consensus 212 ~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~-~~~--~-~ 278 (382)
T 4eb5_A 212 RKEA---KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEI------TAMEWREEAERLRRLRDRIIDNVL-KIE--E-S 278 (382)
T ss_dssp ETTC---CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHT-TST--T-E
T ss_pred cccc---ccCceecCCCccccccCCCccHHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHh-hCC--C-e
Confidence 3321 11110000 00111223343333333333321 233457788889999999999998 762 1 3
Q ss_pred ccccCCc---ceeeec---CCCHH-HHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCcc
Q 015283 349 SFILRQI---GMFSFT---GLNKA-QSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSLA 393 (410)
Q Consensus 349 ~~~~~~~---~~~~~~---~~~~~-~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~~ 393 (410)
.+..+.. +.++++ +.+.+ +.+.+. ++||.+.++ + ||+++. .+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~ 357 (382)
T 4eb5_A 279 YLNGHPEKRLPNNVNVRFSYIEGESIVLSLD-MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDE 357 (382)
T ss_dssp EECSCSSSBCTTEEEEEETTSCHHHHHHHHH-HHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHH
T ss_pred EEeCCcccCCCCEEEEEeCCcCHHHHHHHHH-HCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHH
Confidence 4444321 323332 33444 455554 569998763 2 999874 4899
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
++++++++|++++++
T Consensus 358 ~i~~~~~~l~~~~~~ 372 (382)
T 4eb5_A 358 DVDRLLEVLPGVIER 372 (382)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998765
No 114
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.96 E-value=7.8e-27 Score=227.24 Aligned_cols=357 Identities=11% Similarity=0.084 Sum_probs=226.8
Q ss_pred CCCCCCCCCcccchhHhhh--cCCCCeeeeeeeee-ecCCCc---ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHH
Q 015283 12 GVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAY-RTEELQ---PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKV 85 (410)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~-~~~~~~---~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~a 85 (410)
++..+.+..+.....+... .....++++..|.+ +|.... ..+++.+.+++.. .. ..|.+..+..++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~~----~~-~~y~~~~~~~~l~~~ 83 (456)
T 2ez2_A 9 RIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMM----GD-EAYAGSENFYHLERT 83 (456)
T ss_dssp CCCCCCCCCCCCHHHHHHHHHHTTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHTT----CC-CCSSSCHHHHHHHHH
T ss_pred eeeeecccCCCCHHHHHHHHHHCCCCcccCCcccceeeeccccCCccCCHHHHHHhhc----ch-hhcccChhHHHHHHH
Confidence 4555555555444443322 23345778887763 443222 2345677766542 22 568778889999999
Q ss_pred HHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCC-cchhhhhhhCCCCccceeeecC----
Q 015283 86 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW-GNHKNIFNDARVPWSEYRYYDP---- 160 (410)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~---- 160 (410)
+++++.. +++++ ++||++++.+++.. .+.+|| +++.|+| +.+...+...|++++.+++.+.
T Consensus 84 la~~~~~--------~~~~~--~~~gt~a~~~al~~--l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~ 149 (456)
T 2ez2_A 84 VQELFGF--------KHIVP--THQGRGAENLLSQL--AIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAG 149 (456)
T ss_dssp HHHHHCC--------SEEEE--ESSHHHHHHHHHHH--HCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTT
T ss_pred HHHHhCC--------CcEEE--eCCcHHHHHHHHHH--hCCCCC--EeccccccchhHHHHHHcCCEEEEeccccccccc
Confidence 9999732 36778 89999999998433 367999 7888999 8878888999999998887421
Q ss_pred C----CcccChhhHHHHHhcCC-CCcEEEEeCCCCC-CCCCCCCHHHHHHHHHHHHHcCCcccccccCCC----------
Q 015283 161 K----TVGLDFEGMIADIKAAP-GGSFILLHGCAHN-PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG---------- 224 (410)
Q Consensus 161 ~----~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~N-PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~---------- 224 (410)
. ++.+|++++++.+.+.. ...+++++++|+| |||.+++.+++++|+++|++||+++|+||+|..
T Consensus 150 ~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~ 229 (456)
T 2ez2_A 150 LNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQE 229 (456)
T ss_dssp CCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHS
T ss_pred ccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccc
Confidence 1 36789999999987521 1237778889998 999999999999999999999999999999875
Q ss_pred CCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhcc-CcccCCChhHHHH-
Q 015283 225 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLAR-PMYSNPPVHGARI- 302 (410)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 302 (410)
+.+.+ .....+........+++++ |++|..+ +| +.||+ ++.++++++++......... ....+.+.....+
T Consensus 230 ~~~~g--~~~~~~~~~~~~~~d~~~~-S~kk~~~-~~-~gG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 302 (456)
T 2ez2_A 230 QGFEN--KSIAEIVHEMFSYADGCTM-SGKKDCL-VN-IGGFL--CMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAM 302 (456)
T ss_dssp TTCTT--SCHHHHHHHHHTTCSEEEE-ETTTTTC-CS-SCEEE--EESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHH
T ss_pred cccCC--cchhhhhhhhcccCCEEEE-eCcccCC-CC-ceeEE--EECCHHHHHHHHHHHhhccCcccccCcchhHHHHH
Confidence 33321 1111111011222345544 7888765 66 78997 44467776665543221111 0111222222222
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C-HHH-----HH
Q 015283 303 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N-KAQ-----SD 369 (410)
Q Consensus 303 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~-~~~-----~~ 369 (410)
+...++ .+ . ++..++.+++.+++.+.|+ +.| +.+..+.+++++|+.+ + .++ ..
T Consensus 303 a~~~~~--~~----~---~~~~~~~~~~~~~l~~~L~-~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 368 (456)
T 2ez2_A 303 AIGLRE--AM----Q---YEYIEHRVKQVRYLGDKLK-AAG----VPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAA 368 (456)
T ss_dssp HHHHHH--HT----C---HHHHHHHHHHHHHHHHHHH-HTT----CCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHH
T ss_pred HHHHHH--Hh----H---HHHHHHHHHHHHHHHHHHh-cCC----CccccCCCceEEEEEhHHhcCCCChhhccHHHHHH
Confidence 222211 00 0 2333444556677788887 665 3555566777777532 2 223 44
Q ss_pred HhhhcCcEEEcC------------------C-C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283 370 NMTNKWHVYMTK------------------D-G--RISLAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 370 ~ll~~~gi~v~~------------------~-g--Ris~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
++++++||.+.+ + + ||+++. .+++++++++++|++++++
T Consensus 369 ~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 369 SIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp HHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 554566887532 1 3 999873 4899999999999998764
No 115
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.96 E-value=1.4e-27 Score=231.10 Aligned_cols=334 Identities=14% Similarity=0.042 Sum_probs=206.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|......|+. +|.+.+++.+++.......| +.....++++.+++++. . ++++++ ++||++
T Consensus 55 ~~ylD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-~------~~~v~~--~~sGse 122 (434)
T 3l44_A 55 NKYIDYLAAYGPIITGHA--HPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEAMP-A------LDKVRF--VNSGTE 122 (434)
T ss_dssp CEEEECCGGGTTCSSCBT--CHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHCT-T------CSEEEE--ESSHHH
T ss_pred CEEEECCCchhccccCCC--CHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHhCC-C------CCEEEE--eCchHH
Confidence 467899888753344553 68999998888765432334 56677788898888853 1 578999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-CCCccceeeecCCCc------------ccChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RVPWSEYRYYDPKTV------------GLDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~------------~~d~~~l~~~i~~~~~~ 180 (410)
+++.+++++....++++|++.+|+|.++....... |.....+........ -.|++.+++.+.+.++.
T Consensus 123 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 202 (434)
T 3l44_A 123 AVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHE 202 (434)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCC
Confidence 99999766654457899999999998765544332 221111111000000 01789999888753335
Q ss_pred cEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
+.++++++++|++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+ ....... .....+ +.|+||.++
T Consensus 203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g---~~~~~~~-~~~~~d---i~t~sK~~~- 273 (434)
T 3l44_A 203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFM---YGGAQDL-LGVTPD---LTALGKVIG- 273 (434)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSS---SSCHHHH-HTCCCS---EEEEEGGGG-
T ss_pred EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecc---ccHHHHH-cCCCCC---eeehhhhhc-
Confidence 66777666666677665 7888999999999999999999999988 321 1112212 222223 348999998
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
+|+|+||+++ ++++++.+.... ......+.+.+.+++.++...|+ +. +..++++++++++.+
T Consensus 274 ~G~~iG~~~~---~~~i~~~~~~~~-~~~~~~t~~~~~~a~aaa~aal~~~~~~-----------~~~~~~~~~~~~l~~ 338 (434)
T 3l44_A 274 GGLPIGAYGG---KKEIMEQVAPLG-PAYQAGTMAGNPASMASGIACLEVLQQE-----------GLYEKLDELGATLEK 338 (434)
T ss_dssp TTSSCEEEEE---CHHHHTTBTTTS-SBCCCCTTTTCHHHHHHHHHHHHHHTST-----------THHHHHHHHHHHHHH
T ss_pred CCcCeeeEEE---cHHHHHhhccCC-CcccCCCCCcCHHHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHH
Confidence 8999999855 777544432110 01111223455666665544443 32 223334444444444
Q ss_pred Hhhh---ccCCCCCcccccCCcceeeecCC--------------C----HHHHHHhhhcCcEEEcCCC----eEEecCCC
Q 015283 337 SLSA---KDKSGKDWSFILRQIGMFSFTGL--------------N----KAQSDNMTNKWHVYMTKDG----RISLAGLS 391 (410)
Q Consensus 337 ~l~~---~~g~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~ 391 (410)
.|++ ..+. .....+. |.|.++.+ + .++...+++ +||.+.|++ |+++.. +
T Consensus 339 ~L~~~~~~~~~---~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~rl~~~~-t 412 (434)
T 3l44_A 339 GILEQAAKHNI---DITLNRL-KGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQ-EGVNLAPSKYEAWFLTTEH-T 412 (434)
T ss_dssp HHHHHHHHTTC---CEEEEEE-TTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHH-TTEECCSSTTCCEECCTTC-C
T ss_pred HHHHHHHhCCC---CEEEEee-ccEEEEEEecCcccchhhccccCHHHHHHHHHHHHH-CCeEEeecCCCcEEEeccc-C
Confidence 4430 2332 1222333 34433311 1 234556665 699999976 776544 9
Q ss_pred cccHHHHHHHHHHHhhhc
Q 015283 392 LAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 392 ~~~i~~~~~~l~~~l~~~ 409 (410)
++++++++++|+++++++
T Consensus 413 ~e~i~~~l~~l~~~l~~~ 430 (434)
T 3l44_A 413 KEDIEYTIEAVGRAFAAL 430 (434)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998753
No 116
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.96 E-value=2.1e-27 Score=228.66 Aligned_cols=329 Identities=11% Similarity=0.002 Sum_probs=210.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC---ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN---KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+|+..|.+-...|++. +|.+.+++.+.+..... ..| +.....++++.+++++ +... +++|++ ++|
T Consensus 42 ~~~lD~~~~~~~~~lG~~~-~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~~~~-~~~v~~--~~g 112 (419)
T 2eo5_A 42 NKYLDFTSGIGVNNLGWPS-HPEVIKIGIEQMQKLAHAAANDF-YNIPQLELAKKLVTYS----PGNF-QKKVFF--SNS 112 (419)
T ss_dssp CEEEESSGGGGTTTTCBSC-CHHHHHHHHHHHTTSCCCSCSCS-CCHHHHHHHHHHHHHS----SCSS-CEEEEE--ESS
T ss_pred CEEEEccCChhhhccCCCC-CHHHHHHHHHHHhhCcccccccc-CCHHHHHHHHHHHHhC----CCCc-CCEEEE--eCc
Confidence 4578998887411223321 58899999888754311 123 2333456666666664 3222 578999 999
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hC-------------CCCccceeeecCCCc----c--------
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA-------------RVPWSEYRYYDPKTV----G-------- 164 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~-------------g~~~~~v~~~~~~~~----~-------- 164 (410)
|++++..+++++..+ +||+|++++|+|.++..... .. +..++.++.. +.+ +
T Consensus 113 g~ea~~~ai~~~~~~-~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~g~~~~~~~~ 189 (419)
T 2eo5_A 113 GTEAIEASIKVVKNT-GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYP--NPYRNPWHINGYENPS 189 (419)
T ss_dssp HHHHHHHHHHHHHTT-SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCC--CSSSCTTCCCTTTCHH
T ss_pred hHHHHHHHHHHHHHh-hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCC--ccccccccccccccch
Confidence 999999986544322 38999999999976543221 11 1245556552 222 1
Q ss_pred ----cChhhHH-HHHhcCC--CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhH
Q 015283 165 ----LDFEGMI-ADIKAAP--GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 236 (410)
Q Consensus 165 ----~d~~~l~-~~i~~~~--~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~ 236 (410)
+|++.++ +.+++.. +++++++++..+||||. +++.+++++|.++|++||+++|+||+|.+|+..+. .+.
T Consensus 190 ~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~---~~~ 266 (419)
T 2eo5_A 190 ELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK---LFA 266 (419)
T ss_dssp HHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSG
T ss_pred hhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc---hhh
Confidence 4678888 8887421 24556664444567896 67888899999999999999999999998875321 111
Q ss_pred hHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHH
Q 015283 237 VRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDE 315 (410)
Q Consensus 237 ~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~ 315 (410)
+.. .....+++ ||||.++ +| +|+||+++ +++++ .+ .. ... .+.+.+.+++.++...|+..
T Consensus 267 ~~~-~~~~~d~~---t~sK~~~-~G~~riG~~~~---~~~~~-~~-~~---~~~-~t~~~n~~~~~aa~aal~~~----- 327 (419)
T 2eo5_A 267 IEN-FNTVPDVI---TLAKALG-GGIMPIGATIF---RKDLD-FK-PG---MHS-NTFGGNALACAIGSKVIDIV----- 327 (419)
T ss_dssp GGG-GTCCCSEE---EECGGGG-TTTSCCEEEEE---EGGGC-CC-----------CCCCCHHHHHHHHHHHHHH-----
T ss_pred HHh-cCCCCCEE---Eeccccc-CCccceEEEEE---chHhh-cC-Cc---ccC-CCCCCCHHHHHHHHHHHHHH-----
Confidence 111 12233433 8999999 59 99999855 56654 43 21 111 22345666666666555421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-C----HHHHHHhhhcCcEEEcCCC----eEE
Q 015283 316 WKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-N----KAQSDNMTNKWHVYMTKDG----RIS 386 (410)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~ll~~~gi~v~~~g----Ris 386 (410)
++.+++++++++++.+.|+ ++ . ....+. |.|.++.+ . ..+...++ ++||.+.|++ ||+
T Consensus 328 -----~~~~~~~~~~~~~l~~~L~-~~-~----~~~~~~-g~~~~i~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~lRis 394 (419)
T 2eo5_A 328 -----KDLLPHVNEIGKIFAEELQ-GL-A----DDVRGI-GLAWGLEYNEKKVRDRIIGESF-KRGLLLLPAGRSAIRVI 394 (419)
T ss_dssp -----HHHHHHHHHHHHHHHHHHT-TS-S----SEEEEE-TTEEEEECSCHHHHHHHHHHHH-HTTEECEEETTTEEEEC
T ss_pred -----HHHHHHHHHHHHHHHHHHH-Hh-h----hheEee-eEEEEEEEecCccHHHHHHHHH-HCCCEEecCCCCEEEEE
Confidence 2267888899999999998 65 1 223333 55666655 2 22455665 4799999864 897
Q ss_pred ecC-CCcccHHHHHHHHHHHhhhc
Q 015283 387 LAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 387 ~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
++. .+++++++++++|+++++++
T Consensus 395 ~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 395 PPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhc
Confidence 652 48999999999999998764
No 117
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.95 E-value=1.1e-27 Score=228.97 Aligned_cols=334 Identities=13% Similarity=0.080 Sum_probs=216.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-C-CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~-~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|++.|.+....++ .++.+.+++.+.+... . ...| +.....++++.+++++.. .++++++ ++||
T Consensus 45 ~~~ld~~~~~~~~~~g~--~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~------~~~~v~~--~~gg 113 (395)
T 1vef_A 45 NEYIDCVGGYGVANLGH--GNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAILPP------ELNRVFP--VNSG 113 (395)
T ss_dssp CEEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTSCT------TEEEEEE--ESSH
T ss_pred CEEEEccCccccccCCC--CCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhcCC------CcCEEEE--cCcH
Confidence 45789988864222333 3688999888877432 1 1224 445667888888887421 2678988 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcch-hhhhhhCCCCccc---eeeecCCC--cccChhhHHHHHhcCCCCcEEEE
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFNDARVPWSE---YRYYDPKT--VGLDFEGMIADIKAAPGGSFILL 185 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~---v~~~~~~~--~~~d~~~l~~~i~~~~~~~~~ii 185 (410)
++++.++...+..+.+||+|++++|+|.+. ...+...|.+... +|+..+-. ...|++++++.+++ ++++++
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~---~~~~v~ 190 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE---ETAAVI 190 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCT---TEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhcc---CEEEEE
Confidence 999999865443335889999999998654 4456666765321 22211000 01488999998874 677777
Q ss_pred eCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283 186 HGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 186 ~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 264 (410)
+++++||||.+. +.+++++|+++|++||+++|+||+|.+++..+ ....+.. .+...+++ ||||.++. |+|+
T Consensus 191 ~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g---~~~~~~~-~~~~~d~~---s~sK~~~~-g~~~ 262 (395)
T 1vef_A 191 LEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTG---KRFAFEH-FGIVPDIL---TLAKALGG-GVPL 262 (395)
T ss_dssp ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHH-HTCCCSEE---EECGGGGT-TSSC
T ss_pred EeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCC---chhHhhh-cCCCCCEE---EEcccccC-CCce
Confidence 777789999865 67889999999999999999999999765321 1111111 22223433 88999995 9999
Q ss_pred ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 265 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
||+++ ++++++++ .........+++.+++.++...|+.. .+ ++..++++++++++.+.|+ +++.
T Consensus 263 G~~~~---~~~~~~~l----~~~~~~~~~~~~~~~~~a~~~al~~~------~~--~~~~~~~~~~~~~l~~~l~-~~~~ 326 (395)
T 1vef_A 263 GVAVM---REEVARSM----PKGGHGTTFGGNPLAMAAGVAAIRYL------ER--TRLWERAAELGPWFMEKLR-AIPS 326 (395)
T ss_dssp EEEEE---EHHHHHTS----CTTSSCCSSTTCHHHHHHHHHHHHHH------HH--HTTHHHHHHHHHHHHHHHH-TSCC
T ss_pred EEEEe---hHHHHhhh----ccCCcCCCcCCCHHHHHHHHHHHHHH------Hh--CCHHHHHHHHHHHHHHHHH-Hhhc
Confidence 99855 55544433 22111122245555555554444321 11 3456778888899999998 7753
Q ss_pred CCCcccccCCcceeeecCC---CHHHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHHHHHHHHHHhh
Q 015283 345 GKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~~~~~l~~~l~ 407 (410)
+ +....+..+.|+|+.+ ..++...+++++||.+.+++ ||+++ ..+++++++++++|+++++
T Consensus 327 ~--~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 395 (395)
T 1vef_A 327 P--KIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA 395 (395)
T ss_dssp T--TEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred C--ceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHhC
Confidence 1 1111233456666544 34566777724699999864 88765 2489999999999998863
No 118
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.95 E-value=1.8e-27 Score=230.69 Aligned_cols=340 Identities=11% Similarity=-0.009 Sum_probs=209.0
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|++.|.+....|+ .+|.+.+++.+.+... ..|....+..++++++++++....+... ++++++ ++||++
T Consensus 43 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~--~~ggse 115 (439)
T 3dxv_A 43 RELIDLSGAWGAASLGY--GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEG-THKIWF--GHSGSD 115 (439)
T ss_dssp CEEEESSTTTTTCTTCB--SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEE--ESSHHH
T ss_pred CEEEECCCchhhccCCC--CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEE--eCCHHH
Confidence 46789998876333454 3689999988877542 3344345555666666666655443221 168999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-CCC--------------ccceeeecCCCccc-----ChhhHHHH
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RVP--------------WSEYRYYDPKTVGL-----DFEGMIAD 173 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~--------------~~~v~~~~~~~~~~-----d~~~l~~~ 173 (410)
++..+.+++..+.+++.|++.+|+|.++....... |.. +..++.. +.+.. |++.+++.
T Consensus 116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~ 193 (439)
T 3dxv_A 116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEK 193 (439)
T ss_dssp HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHH
Confidence 99998765544557789999999886654433322 322 1233331 11111 68999999
Q ss_pred Hh-cCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 174 IK-AAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 174 i~-~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
+. ..+++++++++++++|++|.+.+.++ +++|.++|++||+++|+||+|.+|+..+ ....... .+...+++
T Consensus 194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g---~~~~~~~-~~~~~di~--- 266 (439)
T 3dxv_A 194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSG---RLHCFEH-EGFVPDIL--- 266 (439)
T ss_dssp HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTS---SSSGGGG-TTCCCSEE---
T ss_pred HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHh-cCCCCCEE---
Confidence 84 22346777787888888888765555 9999999999999999999999876432 1111111 12223433
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
||||.++ +|+|+||+++ ++++++. +.......+. ++.+++.++...|+... + +...+++++++
T Consensus 267 s~sK~~~-~G~riG~~~~---~~~~~~~----~~~~~~~~t~-~~~~~~~aa~aal~~~~------~--~~~~~~~~~~~ 329 (439)
T 3dxv_A 267 VLGKGLG-GGLPLSAVIA---PAEILDC----ASAFAMQTLH-GNPISAAAGLAVLETID------R--DDLPAMAERKG 329 (439)
T ss_dssp EECGGGG-TTSCCEEEEE---EHHHHTS----CSSSSCCTTT-TCHHHHHHHHHHHHHHH------H--TTHHHHHHHHH
T ss_pred EEcchhc-CCcceEEEEE---CHHHHhh----hcCCCcCCCc-ccHHHHHHHHHHHHHHH------h--cCHHHHHHHHH
Confidence 9999999 6999999855 6674433 3322222223 55666666655544211 0 23334444555
Q ss_pred HHHHHHhhhccCCC-CCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCCC------eEEecC-C
Q 015283 332 QKLFDSLSAKDKSG-KDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG------RISLAG-L 390 (410)
Q Consensus 332 ~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~g------Ris~~~-~ 390 (410)
+++.+.|. ++... ..+....+. |.|+++.+ ..++...+++ .||.+.|++ ||+++. .
T Consensus 330 ~~~~~~l~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~iRi~~~~~~ 406 (439)
T 3dxv_A 330 RLLRDGLS-ELAKRHPLIGDIRGR-GLACGMELVCDRQSREPARAETAKLIYRAYQ-LGLVVYYVGMNGNVLEFTPPLTI 406 (439)
T ss_dssp HHHHHHHH-HHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHHH-HTEECEEESTTSCEEEECCCTTC
T ss_pred HHHHHHHH-HHHHhCCCeEEEEEE-EEEEEEEEecCccccCCCHHHHHHHHHHHHH-CCcEEeecCCCCCEEEEECCCCC
Confidence 55555554 33100 002223333 44554422 1234566666 599998864 887543 3
Q ss_pred CcccHHHHHHHHHHHhhhc
Q 015283 391 SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~~ 409 (410)
+++++++++++|+++++++
T Consensus 407 t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 407 TETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp CHHHHHHHHHHHHHHHHTG
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 8999999999999998764
No 119
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.95 E-value=1.5e-27 Score=230.38 Aligned_cols=334 Identities=12% Similarity=0.033 Sum_probs=205.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|......|+. +|.+.+++.+.+.......| +.....++++.+++++. .++++++ ++||++
T Consensus 52 ~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~-------~~~~v~~--~~ggse 119 (427)
T 3fq8_A 52 NRYIDYVGTWGPAICGHA--HPEVIEALKVAMEKGTSFGA-PCALENVLAEMVNDAVP-------SIEMVRF--VNSGTE 119 (427)
T ss_dssp CEEEESSGGGTTCTTCBT--CHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHST-------TCSEEEE--ESSHHH
T ss_pred CEEEECCCchhhhccCCC--CHHHHHHHHHHHHhCCCcCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCCHHH
Confidence 468999988753344553 69999999888765322223 33344455555555532 2678999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC-CCCccceeeecCCCcc------------cChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RVPWSEYRYYDPKTVG------------LDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~------------~d~~~l~~~i~~~~~~ 180 (410)
+++.+.++...+.++++|++.+|+|.++....... |.....+......+.. -|++.+++.+++.+++
T Consensus 120 a~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 199 (427)
T 3fq8_A 120 ACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGE 199 (427)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCC
Confidence 99999766555556689999999997765443322 2221111110011110 1889999999875556
Q ss_pred cEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
+.++++++++|++|.+.+. +.+++|.++|++||++||+||+|.+| ..+ ....... .....+ +.|+||.++
T Consensus 200 ~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g---~~~~~~~-~~~~~d---i~t~sK~~~- 270 (427)
T 3fq8_A 200 IAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIA---YGGVQEK-FGVTPD---LTTLGKIIG- 270 (427)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTB---TTHHHHH-TTCCCS---EEEECGGGG-
T ss_pred EEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC---cchhhHh-cCCCCC---hhhhhhhhh-
Confidence 7777877778888877764 44999999999999999999999987 321 1122211 122223 358999999
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
+|+|+||+++ ++++++.+... .......+.+++.+++.++...|+ +. ...++++++++++.+
T Consensus 271 ~G~~~G~~~~---~~~~~~~~~~~-~~~~~~~t~~~~~~~~aa~~aal~~~~~~-----------~~~~~~~~~~~~~~~ 335 (427)
T 3fq8_A 271 GGLPVGAYGG---KREIMQLVAPA-GPMYQAGTLSGNPLAMTAGIKTLELLRQP-----------GTYEYLDQITKRLSD 335 (427)
T ss_dssp TTSSCEEEEE---CHHHHTTBTTT-SSBCCCCTTTTCHHHHHHHHHHHHHHTST-----------THHHHHHHHHHHHHH
T ss_pred CCcceEEEEE---cHHHHHhhccC-CCccccCCCCcCHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHH
Confidence 7999999855 77754443321 001111222445666665544443 22 223334444444444
Q ss_pred Hhhh---ccCCCCCcccccCCcceeeecCC-----C-------------HHHHHHhhhcCcEEEcCCC--eEEecC-CCc
Q 015283 337 SLSA---KDKSGKDWSFILRQIGMFSFTGL-----N-------------KAQSDNMTNKWHVYMTKDG--RISLAG-LSL 392 (410)
Q Consensus 337 ~l~~---~~g~~~~~~~~~~~~~~~~~~~~-----~-------------~~~~~~ll~~~gi~v~~~g--Ris~~~-~~~ 392 (410)
.|++ ..+. ....+..+.+.++.+ . .++...+++ +||.+.+++ |++++. .++
T Consensus 336 ~l~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~~r~~~~~~~t~ 410 (427)
T 3fq8_A 336 GLLAIAQETGH----AACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLE-QGIYLAPSQFEAGFTSLAHTE 410 (427)
T ss_dssp HHHHHHHHTTC----CCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTTSCEECCTTCCH
T ss_pred HHHHHHHhCCC----CeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHH-CCcEEecCCCCCEEeeCcCCH
Confidence 4430 2331 222233455554422 1 234556665 699999987 776543 389
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
+++++++++|++++++
T Consensus 411 e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 411 EDIDATLAAARTVMSA 426 (427)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999875
No 120
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.95 E-value=4.3e-27 Score=227.21 Aligned_cols=335 Identities=16% Similarity=0.058 Sum_probs=212.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|......|+. +|.+.+++.+++.... ..+.+.....++++.+++++. . .+++++ ++||++
T Consensus 53 ~~ylD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~-~~~~~~~~~~~l~~~la~~~~-~------~~~v~~--~~~Gse 120 (429)
T 3k28_A 53 NEYIDYVLSWGPLIHGHA--NDRVVEALKAVAERGT-SFGAPTEIENKLAKLVIERVP-S------IEIVRM--VNSGTE 120 (429)
T ss_dssp CEEEESCGGGTTCTTCBS--CHHHHHHHHHHHHHCS-CCSSCCHHHHHHHHHHHHHST-T------CSEEEE--ESSHHH
T ss_pred CEEEECCCChhhcccCCC--CHHHHHHHHHHHhhCc-CcCCCCHHHHHHHHHHHHhCC-C------CCEEEE--eCChHH
Confidence 467899988753345543 6999999988876543 233466777899999999853 1 578999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCCccceeeecCCCcc------------cChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVG------------LDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~------------~d~~~l~~~i~~~~~~ 180 (410)
+++.+.++.....++++|++.+|+|.++..... ..|.....+......... -|++.+++.+.+.+++
T Consensus 121 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (429)
T 3k28_A 121 ATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDD 200 (429)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCC
Confidence 999987666544577899999999976654333 233222222211011110 1788999888753345
Q ss_pred cEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
+.++++.+++|++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+ ....... .+...++ .++||.++
T Consensus 201 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g---~~~~~~~-~~~~~di---~t~sK~~~- 271 (429)
T 3k28_A 201 IACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVA---YNCGQGY-YGVTPDL---TCLGKVIG- 271 (429)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSS---TTHHHHH-HTCCCSE---EEECGGGG-
T ss_pred EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC---cchHHHH-hCCCCce---ehhhhhhc-
Confidence 66666555566666655 5777999999999999999999999888 321 1122211 2222333 47999998
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+|+|+||+++ ++++++.+... .......+.+++.+++.++...|+..+ ++..++++++++++.+.|+
T Consensus 272 ~G~~iG~~~~---~~~~~~~~~~~-~~~~~~~t~~~~~~a~aaa~aal~~~~---------~~~~~~~~~~~~~l~~~L~ 338 (429)
T 3k28_A 272 GGLPVGAYGG---KAEIMRQVAPS-GPIYQAGTLSGNPLAMAAGYETLVQLT---------PESYVEFERKAEMLEAGLR 338 (429)
T ss_dssp TTSCCEEEEE---CHHHHTTBTTT-SSBCCCCTTTTCHHHHHHHHHHHHTCC---------HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEE---cHHHHhhhccC-CCccccCCCCCChHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH
Confidence 5999999855 77754443211 001111223556677777766665432 2444555566666666555
Q ss_pred hcc----CCCCCcccccCCcceeeecCC--------------C----HHHHHHhhhcCcEEEcCCC----eEEecCCCcc
Q 015283 340 AKD----KSGKDWSFILRQIGMFSFTGL--------------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSLA 393 (410)
Q Consensus 340 ~~~----g~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~ll~~~gi~v~~~g----Ris~~~~~~~ 393 (410)
++ +. .....+.+. |.++.+ + .++...+++ +||.+.|++ |+++.. +++
T Consensus 339 -~~~~~~~~---~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~r~~~~~-t~e 411 (429)
T 3k28_A 339 -KAAEKHGI---PHHINRAGS-MIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVE-QGVFLPPSQFEGLFLSTVH-SDA 411 (429)
T ss_dssp -HHHHHTTC---CCEEEEETT-EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTTSCBCCCTTC-CHH
T ss_pred -HHHhhCCC---CEEEEeecc-EEEEEEecCCcccccccccccHHHHHHHHHHHHH-CCeEEecCCCCCEEEECCC-CHH
Confidence 43 31 122333333 333221 1 334556665 699999965 887655 999
Q ss_pred cHHHHHHHHHHHhhhc
Q 015283 394 KCEYLADAIIDSYHNV 409 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~~ 409 (410)
++++++++|+++++++
T Consensus 412 ~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 412 DIEATIAAAEIAMSKL 427 (429)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998765
No 121
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.95 E-value=1.1e-27 Score=226.18 Aligned_cols=323 Identities=13% Similarity=0.012 Sum_probs=215.4
Q ss_pred eeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-C-cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 36 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-I-EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 36 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~-~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
+++|+.| | ...++.+.+++.+.+. +.|+. . .+..++|+++++++. . +.+++++++ ++||++
T Consensus 5 ~~~~~~g-p------~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g-~---~~~~~~v~~--~~g~t~ 67 (366)
T 1m32_A 5 YLLLTPG-P------LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT-A---SEGYTSVLL--QGSGSY 67 (366)
T ss_dssp CEECSSS-S------CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC-S---SSSEEEEEE--ESCHHH
T ss_pred cccccCC-C------cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC-C---CCcCcEEEE--ecChHH
Confidence 5777777 3 1236888888766431 22321 2 678999999999975 2 112357888 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcC-CCCcc-hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISS-PTWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~-p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
++.++.. ..+.+||+|++++ ++|+. +...+...|.+++.++. ..++.+|++.+++.+++. .+++++++++|+|
T Consensus 68 a~~~~~~--~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~n 142 (366)
T 1m32_A 68 AVEAVLG--SALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDC--GEVARPDVQAIDAILNAD-PTISHIAMVHSET 142 (366)
T ss_dssp HHHHHHH--HSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEEC--CTTSCCCHHHHHHHHHHC-TTCCEEEEESEET
T ss_pred HHHHHHH--HhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcC-CCeEEEEEecccC
Confidence 9999843 3356999988776 66654 56677788999999987 345678999999999863 2356666789999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEe
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~ 271 (410)
|||.+++ +++|.++|++||+++|+||+|...... . .+ ...+.+++++|+||.++. +.++||+++
T Consensus 143 ptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-~-----~~----~~~~~di~~~s~~K~~~~-~~g~G~~~~-- 206 (366)
T 1m32_A 143 TTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGIP-M-----DI----AALHIDYLISSANKCIQG-VPGFAFVIA-- 206 (366)
T ss_dssp TTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTSC-C-----CT----TTTTCSEEEEESSSTTCC-CSSEEEEEE--
T ss_pred CcceecC---HHHHHHHHHHcCCEEEEECCccccCcC-c-----cc----cccCccEEEecCcccccC-CCceEEEEE--
Confidence 9999888 668888899999999999998743321 1 11 122357889999998732 234699865
Q ss_pred CCchhHHHHHHH-----------HHhh-c-cCc-ccCCChhHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHH
Q 015283 272 SSSDLAARVKSQ-----------LKRL-A-RPM-YSNPPVHGARIVANVVGNPALFDEWKAE--MEMMAGRIKNVRQKLF 335 (410)
Q Consensus 272 ~~~~~~~~~~~~-----------~~~~-~-~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 335 (410)
++++++++... .... . ... ..+++..++.++...++. +.+. +++.+++++++++++.
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~~~~~~l~ 279 (366)
T 1m32_A 207 -REQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKE------LAKEGGVAARHQRYQQNQRSLV 279 (366)
T ss_dssp -EHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH------HHHHTHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHH------HHHccCHhHHHHHHHHHHHHHH
Confidence 66644433210 0000 0 001 123444444444333331 1222 4678888999999999
Q ss_pred HHhhhccCCCCCcccccC---CcceeeecCC------CHH-HHHHhhhcCcEEEcCCC-------eEEecCC-CcccHHH
Q 015283 336 DSLSAKDKSGKDWSFILR---QIGMFSFTGL------NKA-QSDNMTNKWHVYMTKDG-------RISLAGL-SLAKCEY 397 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~---~~~~~~~~~~------~~~-~~~~ll~~~gi~v~~~g-------Ris~~~~-~~~~i~~ 397 (410)
+.|+ +++. .+..+ .+++++|+.+ +.. +.+.+.+ +||.+.++. |++++.. +++++++
T Consensus 280 ~~L~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~ 353 (366)
T 1m32_A 280 AGMR-ALGF----NTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKE-QGFVIYPGKVSQSDCFRIGNIGEVYAADITA 353 (366)
T ss_dssp HHHH-HTTC----CBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHH-TTEECEECCCSSSCEEEEECCSSCCHHHHHH
T ss_pred HHHH-HCCC----eeccCchhcCceEEEEEcCccCCCCHHHHHHHHHH-CCEEEECCcCCCCCEEEEecCCCCCHHHHHH
Confidence 9998 7763 33332 3555655532 333 4556655 599998762 9998753 7899999
Q ss_pred HHHHHHHHhhhc
Q 015283 398 LADAIIDSYHNV 409 (410)
Q Consensus 398 ~~~~l~~~l~~~ 409 (410)
++++|+++++++
T Consensus 354 ~~~~l~~~~~~~ 365 (366)
T 1m32_A 354 LLTAIRTAMYWT 365 (366)
T ss_dssp HHHHHHHHCTTC
T ss_pred HHHHHHHHHHhc
Confidence 999999998765
No 122
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.95 E-value=1.3e-27 Score=227.97 Aligned_cols=316 Identities=11% Similarity=0.074 Sum_probs=208.9
Q ss_pred ccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC
Q 015283 51 PYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd 129 (410)
..+++.+.+++.+.... +.+. ......++++.+++++... .++++++ ++||++++..+.. ..+.+||
T Consensus 32 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~--~~gg~~al~~~~~--~~~~~gd 99 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRMIG---HMQKEMLQIMEEIKQGIQYVFQTR-----NPLTLVV--SGSGHCAMETALF--NLLEPGD 99 (393)
T ss_dssp CCCCHHHHHHTTCCCCC---TTSHHHHHHHHHHHHHHHHHHTCC-----CSEEEEE--SCCTTTHHHHHHH--HHCCTTC
T ss_pred CCCCHHHHHHhcccccC---cccHHHHHHHHHHHHHHHHHhCCC-----CCcEEEE--eCCcHHHHHHHHH--hcCCCCC
Confidence 33578888887664322 1111 1234568888888886432 1345888 9999999998843 3477999
Q ss_pred EEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283 130 KVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 207 (410)
Q Consensus 130 ~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~ 207 (410)
+|+++.++|.+ +...++..|.+++.+++ ..++.+|++.+++.+++ .+++++++++|+||||.+++ +++|.+
T Consensus 100 ~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~~ 172 (393)
T 3kgw_A 100 SFLTGTNGIWGMRAAEIADRIGARVHQMIK--KPGEHYTLQEVEEGLAQ--HKPVLLFLVHGESSTGVVQP---LDGFGE 172 (393)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTTHHH
T ss_pred EEEEEeCCchhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHHHhh--CCCcEEEEeccCCcchhhcc---HHHHHH
Confidence 99999888743 36677788999999987 34457899999999975 24566777899999999887 557777
Q ss_pred HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhh
Q 015283 208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL 287 (410)
Q Consensus 208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~ 287 (410)
+|++||+++|+||+|...... .+ ....+.++++.|+||.++ ++.++||+++ ++++++.+.......
T Consensus 173 l~~~~~~~li~De~~~~g~~~-~~---------~~~~~~d~~~~s~sK~~~-~~~g~g~~~~---~~~~~~~~~~~~~~~ 238 (393)
T 3kgw_A 173 LCHRYQCLLLVDSVASLGGVP-IY---------MDQQGIDIMYSSSQKVLN-APPGISLISF---NDKAKYKVYSRKTKP 238 (393)
T ss_dssp HHHHTTCEEEEECTTTTTTSC-CC---------TTTTTCCEEEEESSSTTC-CCSSCEEEEE---CHHHHHHHHTCSSCC
T ss_pred HHHHcCCEEEEECCccccCcc-cc---------hhhcCCCEEEecCccccc-CCCceeEEEE---CHHHHHHHhccCCCC
Confidence 799999999999997632211 11 112235688889999774 2344799765 777655543210000
Q ss_pred -------------------ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015283 288 -------------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 348 (410)
Q Consensus 288 -------------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 348 (410)
......+++..++.++...++.. ..+.+++.+++++++++++.+.|+ +++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g~---- 308 (393)
T 3kgw_A 239 VSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALI-----AEQGLENCWRRHREATAHLHKHLQ-EMGL---- 308 (393)
T ss_dssp SCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHH-HTTC----
T ss_pred CceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHH-HcCC----
Confidence 00111233444433333333211 012357888899999999999998 8763
Q ss_pred ccccC----CcceeeecC----CCH-HHHHHhhhcCcEEEcCCC--------eEEe-cC-CCcccHHHHHHHHHHHhhhc
Q 015283 349 SFILR----QIGMFSFTG----LNK-AQSDNMTNKWHVYMTKDG--------RISL-AG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 349 ~~~~~----~~~~~~~~~----~~~-~~~~~ll~~~gi~v~~~g--------Ris~-~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
++..+ ..+.+.++. .+. ++.+.+++++||.+.+|. ||++ +. .+++++++++++|+++++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 309 KFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHC 388 (393)
T ss_dssp CBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred eeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhh
Confidence 33322 223344332 244 456677665599999852 9997 54 38899999999999998764
No 123
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.95 E-value=5.4e-28 Score=229.49 Aligned_cols=321 Identities=12% Similarity=0.018 Sum_probs=208.6
Q ss_pred ecCCCcccccHHHHHHHHHhhccCCC---ccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHH
Q 015283 45 RTEELQPYVLDVVKKAENLMLERGEN---KEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL 117 (410)
Q Consensus 45 ~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~ 117 (410)
+|..+..++++.+.+++.+.+..... ..|. ......++++.+++++.. +++++++ ++||++++.+
T Consensus 4 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~------~~~~i~~--~~g~~~a~~~ 75 (382)
T 4hvk_A 4 FDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG------GGGTVVF--TSGATEANNL 75 (382)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTC------TTEEEEE--ESSHHHHHHH
T ss_pred ecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCC------CcCeEEE--ECCchHHHHH
Confidence 44555555689999998887643110 1121 122344777777777532 2578988 9999999999
Q ss_pred HHHHHHH--hCCCCEEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 118 AAALIER--YFPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 118 ~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
+...+.. ..+||+|++++++|+.+...+. ..|++++.+++. +++.+|++++++.+.+ +++++++++|+||
T Consensus 76 ~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~~~np 150 (382)
T 4hvk_A 76 AIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRD---DTILVSVQHANNE 150 (382)
T ss_dssp HHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCT---TEEEEECCSBCTT
T ss_pred HHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhcc---CceEEEEECCCCC
Confidence 8543311 1799999999999998876554 469999999873 5567999999999875 7788999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeC
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 272 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~ 272 (410)
||.+.+ +++|.++|++||+ +|+|++|..... .. .+. ..+.++++.|+||.+|++| +|++++
T Consensus 151 tG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~~---~~---~~~----~~~~d~~~~s~~K~~g~~g--~g~~~~--- 211 (382)
T 4hvk_A 151 IGTIQP---VEEISEVLAGKAA-LHIDATASVGQI---EV---DVE----KIGADMLTISSNDIYGPKG--VGALWI--- 211 (382)
T ss_dssp TCBBCC---HHHHHHHHSSSSE-EEEECTTTBTTB---CC---CHH----HHTCSEEEEESGGGTSCTT--CEEEEE---
T ss_pred ceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCCC---CC---Cch----hcCCCEEEEeHHHhcCCCc--eEEEEE---
Confidence 999877 5577788999999 999999653221 11 111 1135688999999887666 577643
Q ss_pred CchhHHHHHHHHHh---hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283 273 SSDLAARVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 349 (410)
Q Consensus 273 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 349 (410)
+++. .+...... ........++...+.++...+. + ..+.+++.+++++++++++.+.|+ +++. +.
T Consensus 212 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---~---~~~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~ 279 (382)
T 4hvk_A 212 RKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAE---I---TAMEWREEAERLRRLRDRIIDNVL-KIEE---SY 279 (382)
T ss_dssp ETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH---H---HHHHHHHHHHHHHHHHHHHHHHHT-TSTT---EE
T ss_pred cCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHH---H---HHhhHHHHHHHHHHHHHHHHHHHh-cCCC---eE
Confidence 2221 11110000 0000111233333333333332 1 134567888999999999999998 7731 34
Q ss_pred cccCCc---ceeee---cCCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEecC-CCcccH
Q 015283 350 FILRQI---GMFSF---TGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAG-LSLAKC 395 (410)
Q Consensus 350 ~~~~~~---~~~~~---~~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~~~-~~~~~i 395 (410)
+..+.. +.+++ .+.+.+.+.+.+.++||.+.+| + ||+++. .+++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i 359 (382)
T 4hvk_A 280 LNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDV 359 (382)
T ss_dssp ECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHH
T ss_pred EeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHH
Confidence 433332 11222 2445555444445579999864 3 999874 478999
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
++++++|+++++++
T Consensus 360 ~~~~~~l~~~~~~~ 373 (382)
T 4hvk_A 360 DRLLEVLPGVIERL 373 (382)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988653
No 124
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.95 E-value=1.8e-27 Score=227.45 Aligned_cols=327 Identities=13% Similarity=0.057 Sum_probs=202.5
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC--cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|++.|.+....|+. +|.+.+++.+.+.... +.| .+.....++++.+++++ + .+++++ ++||
T Consensus 36 ~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----~----~~~v~~--~~gg 102 (395)
T 3nx3_A 36 KKYLDFSSGIGVCALGYN--HAKFNAKIKAQVDKLL-HTSNLYYNENIAAAAKNLAKAS----A----LERVFF--TNSG 102 (395)
T ss_dssp CEEEESSHHHHTCTTCBS--CHHHHHHHHHHHTTCS-CCCTTSBCHHHHHHHHHHHHHH----T----CSEEEE--ESSH
T ss_pred CEEEECCCcHHhccCCCC--CHHHHHHHHHHHHhcc-ccccccCCHHHHHHHHHHHHhc----C----CCeEEE--eCCH
Confidence 468999988653444543 6899999988875422 212 12333455555565553 2 478999 9999
Q ss_pred hhHHHHHHHHHHHh-----CCCCEEEEcCCCCcchhhhhhhCCC-------------CccceeeecCCCcccChhhHHHH
Q 015283 112 TGSLRLAAALIERY-----FPGAKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 112 t~a~~~~~~~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
++++..+.+++... .++|+|++++|+|.++.......+. ++..++. .|++++++.
T Consensus 103 ~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 175 (395)
T 3nx3_A 103 TESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKL 175 (395)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHh
Confidence 99999987655444 5679999999999877544333322 2222222 278888888
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 174 IKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
+++ +++++++.+++|++|.. ++.+++++|.++|++||+++|+||+|.+|+..+ ..+.... .+...+ +.|
T Consensus 176 l~~---~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g---~~~~~~~-~~~~~d---~~t 245 (395)
T 3nx3_A 176 VNE---KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSG---KFFAYEH-AQILPD---IMT 245 (395)
T ss_dssp CCT---TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGG-GTCCCS---EEE
T ss_pred ccC---CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCC---cchhHHh-cCCCCC---EEE
Confidence 864 56677766677777776 678889999999999999999999999886432 1111111 111122 347
Q ss_pred ccccccccCCCcceEEEEeCCchh-HHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 253 YSKNLGLYAERIGAMNVVCSSSDL-AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 253 ~sK~~~~~G~r~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
+||.++ +|+|+||+++ ++++ ++. +.......+.+.+.+++.++...|+...- .+..++.++..+..+
T Consensus 246 ~sK~~~-~G~~~G~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~aa~aal~~~~~----~~~~~~~~~~~~~~~ 313 (395)
T 3nx3_A 246 SAKALG-CGLSVGAFVI---NQKVASNS----LEAGDHGSTYGGNPLVCAGVNAVFEIFKE----EKILENVNKLTPYLE 313 (395)
T ss_dssp ECGGGT-TTSCCEEEEE---CHHHHHHH----SCTTCCSSCBSCCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHH
T ss_pred eccccc-CCCceEEEEE---chhhhhhh----cCCcccCCCCCCCHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHH
Confidence 899998 4999999855 7774 333 33322222334566666666555442100 011223333333333
Q ss_pred HHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHH
Q 015283 332 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADA 401 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~ 401 (410)
+.+.+.+. ..+. +....+ .+.|.++.+ +. ++...+++ +||.+.+++ ||+++. .+++++++++++
T Consensus 314 ~~l~~~~~-~~~~---~~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~ 387 (395)
T 3nx3_A 314 QSLDELIN-EFDF---CKKRKG-LGFMQGLSLDKSVKVAKVIQKCQE-NALLLISCGENDLRFLPPLILQKEHIDEMSEK 387 (395)
T ss_dssp HHHHHHHH-HCTT---EEEEEE-ETTEEEEEECTTSCHHHHHHHHHH-TTEECEEETTTEEEECCCTTCCHHHHHHHHHH
T ss_pred HHHHHHHH-hCCC---eEEEEe-EEEEEEEEeCCcchHHHHHHHHHH-CCCEEecCCCCEEEEECCCCCCHHHHHHHHHH
Confidence 33333333 3331 222223 345555432 33 34556655 699999875 887543 389999999999
Q ss_pred HHHHhhh
Q 015283 402 IIDSYHN 408 (410)
Q Consensus 402 l~~~l~~ 408 (410)
|++++++
T Consensus 388 l~~~l~~ 394 (395)
T 3nx3_A 388 LRKALKS 394 (395)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999875
No 125
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.95 E-value=1.6e-27 Score=228.79 Aligned_cols=313 Identities=11% Similarity=0.014 Sum_probs=210.3
Q ss_pred ccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCC-ceEEEecCChhhHHHHHHHHHHHhCC
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFP 127 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~ggt~a~~~~~~~~~~~~~ 127 (410)
..+++.+.+++.+... ..|.+ .....++++.+++++... .+ .+++ ++||++++..+.. ..+.+
T Consensus 22 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~~~~------~~~~v~~--~~sgt~al~~~~~--~~~~~ 87 (411)
T 3nnk_A 22 INADPRVLRAMSSQLI----GQYDPAMTHYMNEVMALYRGVFRTE------NRWTMLV--DGTSRAGIEAILV--SAIRP 87 (411)
T ss_dssp CCCCHHHHHHHTSCCC----CTTCHHHHHHHHHHHHHHHHHHTCC------CSEEEEE--ESCHHHHHHHHHH--HHCCT
T ss_pred CCCCHHHHHHhhcccc----ccccHHHHHHHHHHHHHHHHHhCCC------CCcEEEE--CCCcHHHHHHHHH--HhcCC
Confidence 3457899888876432 12211 133567888888886432 33 3667 8899999999843 34789
Q ss_pred CCEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283 128 GAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 128 gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i 205 (410)
||+|+++.|+|.+ +...++..|.+++.+++ +.++.+|++.+++.+++ .+++++++++|+||||.+.+ +++|
T Consensus 88 gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i 160 (411)
T 3nnk_A 88 GDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV--PWGEVFTPDQVEDAVKR--IRPRLLLTVQGDTSTTMLQP---LAEL 160 (411)
T ss_dssp TCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTTH
T ss_pred CCEEEEecCCchHHHHHHHHHHcCCeEEEEec--CCCCCCCHHHHHHHHhh--CCCeEEEEeCCCCCcceecc---HHHH
Confidence 9999999999977 88888899999999988 45677899999999975 24566777899999999877 5577
Q ss_pred HHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHH-
Q 015283 206 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL- 284 (410)
Q Consensus 206 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~- 284 (410)
.++|++||+++|+|+++...... .+ ....+.++++.|++|.++ ++.++||+++ ++++++++....
T Consensus 161 ~~l~~~~~~~li~Dea~~~~~~~-~~---------~~~~~~d~~~~s~~K~l~-~~~g~g~~~~---~~~~~~~~~~~~~ 226 (411)
T 3nnk_A 161 GEICRRYDALFYTDATASLGGNP-LE---------TDVWGLDAVSAGMQKCLG-GPSGTSPITL---SARMEEAIRRRKC 226 (411)
T ss_dssp HHHHHHHTCEEEEECTTTBTTBC-CC---------TTTTTCSEEECCSTTTTC-CCSSEEEEEE---CHHHHHHHHTTCC
T ss_pred HHHHHHcCCEEEEECCcccCCcc-cc---------hhccCCcEEEecCccccC-CCCceEEEEE---CHHHHHHHhhccc
Confidence 77799999999999996532211 11 112235788999999753 2345799865 777665554321
Q ss_pred ---------------H----------------hhccCcccCCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHH
Q 015283 285 ---------------K----------------RLARPMYSNPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQ 332 (410)
Q Consensus 285 ---------------~----------------~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 332 (410)
. ........+++..++.++...++. +.+. +++.+++++++++
T Consensus 227 ~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~~~~ 300 (411)
T 3nnk_A 227 VEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARL------ILQEGLDYGIARHKLHGD 300 (411)
T ss_dssp CCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHH------HHHhhHHHHHHHHHHHHH
Confidence 0 000011123334333333333321 1222 5788889999999
Q ss_pred HHHHHhhhccCCCCCcccccCCc---ceeeec----CCCHH-HHHHhhhcCcEEEcCC------C--eEEe-cC-CCccc
Q 015283 333 KLFDSLSAKDKSGKDWSFILRQI---GMFSFT----GLNKA-QSDNMTNKWHVYMTKD------G--RISL-AG-LSLAK 394 (410)
Q Consensus 333 ~l~~~l~~~~g~~~~~~~~~~~~---~~~~~~----~~~~~-~~~~ll~~~gi~v~~~------g--Ris~-~~-~~~~~ 394 (410)
++.+.|+ ++++ .+..+.. +.+.++ +.+.+ +.+.+++++||.+.++ + ||++ +. .++++
T Consensus 301 ~l~~~L~-~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~ 375 (411)
T 3nnk_A 301 ALVKGIQ-AMGL----ETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDC 375 (411)
T ss_dssp HHHHHHH-HTTC----CBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHH
T ss_pred HHHHHHH-HcCC----EeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHH
Confidence 9999998 8763 3333322 334443 23444 4566666669999875 2 9997 53 37899
Q ss_pred HHHHHHHHHHHhhhc
Q 015283 395 CEYLADAIIDSYHNV 409 (410)
Q Consensus 395 i~~~~~~l~~~l~~~ 409 (410)
+++++++|+++++++
T Consensus 376 i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 376 VMTTLSALEAVLNYL 390 (411)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999998754
No 126
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.95 E-value=1.1e-26 Score=224.35 Aligned_cols=343 Identities=9% Similarity=-0.003 Sum_probs=213.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC---ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN---KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+|+..|.+....|+ .+|.+.+++.+.+..... ..|. .....++++.+++++. +.+++|++ ++|
T Consensus 43 ~~ylD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~~------~~~~~v~~--~~g 111 (429)
T 1s0a_A 43 RRLVDGMSSWWAAIHGY--NHPQLNAAMKSQIDAMSHVMFGGIT-HAPAIELCRKLVAMTP------QPLECVFL--ADS 111 (429)
T ss_dssp CEEEESSTTTTTCTTCB--SCHHHHHHHHHHHHHCSCCCCSSEE-CHHHHHHHHHHHHHSC------TTCCEEEE--ESS
T ss_pred CEEEEcCccHhhccCCC--CCHHHHHHHHHHHHhcccccccccC-CHHHHHHHHHHHHhCC------CCCCEEEE--eCC
Confidence 35678877764122333 368899998887754211 2342 3345678888888753 13689999 999
Q ss_pred hhhHHHHHHHHHHHh-C----CCCEEEEcCCCCcchhhhhh-hCC-------------CCccceeeec---CCCc-ccCh
Q 015283 111 GTGSLRLAAALIERY-F----PGAKVLISSPTWGNHKNIFN-DAR-------------VPWSEYRYYD---PKTV-GLDF 167 (410)
Q Consensus 111 gt~a~~~~~~~~~~~-~----~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~---~~~~-~~d~ 167 (410)
|++++..+++.+..+ . |||+|++++|+|.++..... ..| ..+..++... .+.+ .+|+
T Consensus 112 gtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 191 (429)
T 1s0a_A 112 GSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDM 191 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHH
Confidence 999999986654322 2 58999999999987644222 111 1233444321 0123 4799
Q ss_pred hhHHHHHhcCCCCcEEEEeCCC-CCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCC
Q 015283 168 EGMIADIKAAPGGSFILLHGCA-HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 245 (410)
Q Consensus 168 ~~l~~~i~~~~~~~~~ii~~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 245 (410)
+.+++.+++.++++++++++.+ +||||. +.+.+++++|.++|++||+++|+||+|.+|+..+ ....+.. .....
T Consensus 192 ~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g---~~~~~~~-~~~~~ 267 (429)
T 1s0a_A 192 VGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTG---KLFACEH-AEIAP 267 (429)
T ss_dssp HHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGG-GTCCC
T ss_pred HHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccc---hHHHhhh-cCCCC
Confidence 9999988743235666665555 799996 5578889999999999999999999998886432 1111111 12223
Q ss_pred cEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH-HhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 015283 246 ELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL-KRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 323 (410)
Q Consensus 246 ~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 323 (410)
+++ |+||.++ +| +|+||+++ ++++++.+.... .......+.+++.+++.++...|+.. .+ +..
T Consensus 268 d~~---t~sK~l~-~G~~~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~------~~--~~~ 332 (429)
T 1s0a_A 268 DIL---CLGKALT-GGTMTLSATLT---TREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAIL------ES--GDW 332 (429)
T ss_dssp SEE---EECGGGG-TSSSCCEEEEE---CHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHH------HT--CHH
T ss_pred CEE---Eeccccc-CCCccceEEEe---CHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHH------Hh--CCH
Confidence 433 7899998 68 99999865 677555443210 00011122344566665554444311 00 134
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----CH-HHHHHhhhcCcEEEcCCC---eEEec-CCCccc
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RISLA-GLSLAK 394 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~g---Ris~~-~~~~~~ 394 (410)
.++++++++++.+.|+ +++....+....+. |.|+|+.+ +. ++...+++ +||.+.+.+ ||+++ ..++++
T Consensus 333 ~~~~~~~~~~l~~~L~-~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~~iRis~~~~~t~e~ 409 (429)
T 1s0a_A 333 QQQVADIEVQLREQLA-PARDAEMVADVRVL-GAIGVVETTHPVNMAALQKFFVE-QGVWIRPFGKLIYLMPPYIILPQQ 409 (429)
T ss_dssp HHHHHHHHHHHHHHHG-GGGGCTTEEEEEEE-TTEEEEEESSCBCHHHHHHHHHH-TTEECCCBTTEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHH-HHhcCCCEEEEEEe-eEEEEEEECCcccHHHHHHHHHH-CCCEEeccCCEEEEECCCCCCHHH
Confidence 5667777888888887 65310112223333 45666533 33 34566665 699999864 99854 248999
Q ss_pred HHHHHHHHHHHhhhc
Q 015283 395 CEYLADAIIDSYHNV 409 (410)
Q Consensus 395 i~~~~~~l~~~l~~~ 409 (410)
+++++++|+++++++
T Consensus 410 i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 410 LQRLTAAVNRAVQDE 424 (429)
T ss_dssp HHHHHHHHHHHTSSG
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999987653
No 127
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=6.2e-27 Score=224.41 Aligned_cols=324 Identities=13% Similarity=0.021 Sum_probs=213.7
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---CccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
+.+.|..+.+ +++++.+.+++.+.+.... ...|. ...+..++++++++++.. ++++|++
T Consensus 26 ~~~~ld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~-- 91 (406)
T 3cai_A 26 GWVHFDAPAG------MLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNA------DPGGVVL-- 91 (406)
T ss_dssp SCEECBGGGC------CCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTC------CGGGEEE--
T ss_pred CeEEEeCCCc------CCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--
Confidence 3567776654 3447889999888764311 12242 245678999999999743 2578999
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhh----CCCCccceeeecCCCcccChhhHHHHHhcCCCCcE
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 182 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 182 (410)
++|+++++.++...+. .+.+||+|+++.|+|..+...+.. .|.+++.+++. .+++.+|++++++.+++ +++
T Consensus 92 ~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~l~~---~~~ 167 (406)
T 3cai_A 92 GADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVD-IETGELPTWQWESLISK---STR 167 (406)
T ss_dssp ESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCC-TTTCCCCGGGHHHHCCT---TEE
T ss_pred eCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecC-cccCCcCHHHHHHHhCC---Cce
Confidence 9999999998743221 256999999999999987655543 68999999874 24567899999999874 678
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283 183 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 183 ~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 262 (410)
++++++|+||||.+.+ +++|.++|+++|+++|+|++|..... .. .+.. .+.++++.|+||.+| ++
T Consensus 168 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~---~~---~~~~----~~~d~~~~s~~K~~g-~~- 232 (406)
T 3cai_A 168 LVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYR---LL---DIRE----TDADVVTVNAHAWGG-PP- 232 (406)
T ss_dssp EEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTC---CC---CHHH----HCCSEEEEEGGGGTS-CS-
T ss_pred EEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCC---CC---Cchh----cCCCEEEeehhhhcC-CC-
Confidence 8888999999999887 56777889999999999999864221 11 1111 135788999999876 44
Q ss_pred Ccc-eEEEEeCCchhHHHHHHHHHhhcc--------Cc-ccCCChhHHHHHHHHh---CChh------hHHHHHHHHHHH
Q 015283 263 RIG-AMNVVCSSSDLAARVKSQLKRLAR--------PM-YSNPPVHGARIVANVV---GNPA------LFDEWKAEMEMM 323 (410)
Q Consensus 263 r~G-~l~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~a~~~l---~~~~------~~~~~~~~~~~~ 323 (410)
+| |+++ ++++++++ ..... .. ..+++..++.++...+ .+.. ....|.+++++.
T Consensus 233 -~G~~~~~---~~~~~~~l----~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~ 304 (406)
T 3cai_A 233 -IGAMVFR---DPSVMNSF----GSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSA 304 (406)
T ss_dssp -CEEEEES---CHHHHHTS----CCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHH
T ss_pred -cCeEEEE---ehHHHhhc----CCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHH
Confidence 78 8743 66644332 22210 01 1223333332222222 2100 011233356788
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCC---cceeeec---CCCHHH-HHHhhhcCcEEEcCC--------------
Q 015283 324 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ---IGMFSFT---GLNKAQ-SDNMTNKWHVYMTKD-------------- 382 (410)
Q Consensus 324 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~---~~~~~~~---~~~~~~-~~~ll~~~gi~v~~~-------------- 382 (410)
+++++++++++.+.|+ +++. +.+..+. ++ ++++ +.+.+. .+.+ .++||.+.++
T Consensus 305 ~~~~~~~~~~l~~~L~-~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~ 378 (406)
T 3cai_A 305 DAYLNRVFDYLMVSLR-SLPL---VMLIGRPEAQIP-VVSFAVHKVPADRVVQRL-ADNGILAIANTGSRVLDVLGVNDV 378 (406)
T ss_dssp HHHHHHHHHHHHHHHH-TCTT---EEECCCCSSBCS-EEEEEETTBCHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHh-cCCC---eEEcCCccccCC-EEEEEECCcCHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCC
Confidence 8899999999999998 7631 3444332 33 3333 334444 4455 4579998753
Q ss_pred -C--eEEecC-CCcccHHHHHHHHHHH
Q 015283 383 -G--RISLAG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 383 -g--Ris~~~-~~~~~i~~~~~~l~~~ 405 (410)
+ ||+++. .+++++++++++|+++
T Consensus 379 ~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 379 GGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp TCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred CCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 3 999875 3788999999998764
No 128
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.95 E-value=3.6e-27 Score=221.46 Aligned_cols=311 Identities=12% Similarity=-0.001 Sum_probs=208.3
Q ss_pred ccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC
Q 015283 51 PYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd 129 (410)
.++++.+.+++.+.+.. +.|. ...+..++|+++++++... .+++++++ |+||++++.++. ..+.+ |
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~----~~~~~v~~--t~g~t~a~~~~~---~~~~~-d 75 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFDPG----EGALVAAL--AGSGSLGMEAGL---ANLDR-G 75 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHCCC----TTCEEEEE--SSCHHHHHHHHH---HTCSC-C
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhCCC----CCCceEEE--cCCcHHHHHHHH---HHhcC-C
Confidence 34578899888776643 2232 2356789999999997432 23577988 999999999873 23334 8
Q ss_pred EEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283 130 KVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 207 (410)
Q Consensus 130 ~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~ 207 (410)
+|++++|+|.++ ...++..|.+++.+++. +++.+|++.+++.+++. +++++++++|+||||.+++ +++|.+
T Consensus 76 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---~~~i~~ 148 (353)
T 2yrr_A 76 PVLVLVNGAFSQRVAEMAALHGLDPEVLDFP--PGEPVDPEAVARALKRR--RYRMVALVHGETSTGVLNP---AEAIGA 148 (353)
T ss_dssp CEEEEECSHHHHHHHHHHHHTTCCEEEEECC--TTSCCCHHHHHHHHHHS--CCSEEEEESEETTTTEECC---HHHHHH
T ss_pred cEEEEcCCCchHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHHhC--CCCEEEEEccCCCcceecC---HHHHHH
Confidence 999999998875 45567789999999883 45678999999998752 4556677999999999887 557888
Q ss_pred HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHHHHH-----
Q 015283 208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVK----- 281 (410)
Q Consensus 208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~~----- 281 (410)
+|++||+++|+|++|. ++.. .. .+..+ +.++++.|++|.+ +++| +||+++ +++.++++.
T Consensus 149 l~~~~~~~li~D~a~~-~~~~--~~---~~~~~----~~d~~~~s~~K~~~~~~g--~G~~~~---~~~~~~~l~~~~~~ 213 (353)
T 2yrr_A 149 LAKEAGALFFLDAVTT-LGML--PF---SMRAM----GVDYAFTGSQKCLSAPPG--LAPIAA---SLEARKAFTGKRGW 213 (353)
T ss_dssp HHHHHTCEEEEECTTT-TTTS--CC---CHHHH----TCSEEECCTTSTTCCCSS--CEEEEE---CHHHHHHCCCCSCS
T ss_pred HHHHcCCeEEEEcCcc-cccc--cc---ccccc----CceEEEecCcccccCCCc--eEEEEE---CHHHHHHhccCCCc
Confidence 8999999999999985 3321 11 12111 2457888999965 5455 699865 777655543
Q ss_pred -----HHHHhh-ccCcccCCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC
Q 015283 282 -----SQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 354 (410)
Q Consensus 282 -----~~~~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 354 (410)
...... ......+++...+.++...++. +.+. +++.+++++++++++.+.|+ ++| +++..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~ 282 (353)
T 2yrr_A 214 YLDLARVAEHWERGGYHHTTPVLLHYALLEALDL------VLEEGVAARERRAREVYAWVLEELK-ARG----FRPYPKA 282 (353)
T ss_dssp TTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHHHHHHHHHH-HTT----CEESCSS
T ss_pred cccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHH------HHHhhHHHHHHHHHHHHHHHHHHHH-HCC----CccccCc
Confidence 000000 1111223444444443333321 1222 56788899999999999998 775 3444332
Q ss_pred --cceeeecC----CCHH-HHHHhhhcCcEEEcCC------C--eEEec-CCCcccHH-HHHHHHHHHhhh
Q 015283 355 --IGMFSFTG----LNKA-QSDNMTNKWHVYMTKD------G--RISLA-GLSLAKCE-YLADAIIDSYHN 408 (410)
Q Consensus 355 --~~~~~~~~----~~~~-~~~~ll~~~gi~v~~~------g--Ris~~-~~~~~~i~-~~~~~l~~~l~~ 408 (410)
.++++++. .+.+ +.+.+.+ +||.+.++ + |+++. ..++++++ +++++|+++++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 283 SPLPTVLVVRPPEGVDADRLVRALYA-EGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp SBCTTEEEEECCTTCCHHHHHHHHHH-TTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred cCCCeEEEEECCCCCCHHHHHHHHHH-CCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 44444443 2444 4556655 59999865 2 99983 35889999 999999998764
No 129
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.95 E-value=6.1e-27 Score=225.11 Aligned_cols=312 Identities=11% Similarity=0.032 Sum_probs=207.7
Q ss_pred cccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceE-EEecCChhhHHHHHHHHHHHhCCC
Q 015283 52 YVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVA-TVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 52 ~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~-~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
.+++.+.+++.+.. ...|.+ .....++++.+++++... +++++ + ++||++++..+.. ..+.+|
T Consensus 21 ~~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~g~~------~~~~~~~--~~s~t~al~~~~~--~l~~~g 86 (416)
T 3isl_A 21 EVDPRVLRVMSTPV----VGQFDPAFTGIMNETMEMLRELFQTK------NRWAYPI--DGTSRAGIEAVLA--SVIEPE 86 (416)
T ss_dssp CCCHHHHHHTTSCC----CCTTSHHHHHHHHHHHHHHHHHTTCC------CSEEEEE--ESCHHHHHHHHHH--HHCCTT
T ss_pred CcCHHHHHHhcccC----CCCccHHHHHHHHHHHHHHHHHhCCC------CCcEEEe--cCcHHHHHHHHHH--HhcCCC
Confidence 34677777665522 122321 334667888888885422 44444 6 7889999999843 347899
Q ss_pred CEEEEcCCCCcc--hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 129 AKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 129 d~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
|+|++++|+|.+ +...++..|.+++.+++. .++.+|++++++.+++ ++++++++++|+||||.+.+ +++|.
T Consensus 87 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~ 159 (416)
T 3isl_A 87 DDVLIPIYGRFGYLLTEIAERYGANVHMLECE--WGTVFDPEDIIREIKK--VKPKIVAMVHGETSTGRIHP---LKAIG 159 (416)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CHHHH
T ss_pred CEEEEecCCcccHHHHHHHHhcCCeeEEEecC--CCCCCCHHHHHHHHhh--CCCcEEEEEccCCCCceecC---HHHHH
Confidence 999999999987 677788899999999973 4567899999999973 25667777999999999877 66788
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHH--
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL-- 284 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~-- 284 (410)
++|++||+++|+|++|...... .+. ...+.++++.|++|.++ ++.++|++++ ++++++++....
T Consensus 160 ~l~~~~~~~li~D~a~~~~~~~-~~~---------~~~~~d~~~~s~~K~l~-g~~g~g~~~~---~~~~~~~~~~~~~~ 225 (416)
T 3isl_A 160 EACRTEDALFIVDAVATIGGCE-VKV---------DEWKIDAAIGGTQKCLS-VPSGMAPITY---NERVADVIAARKKV 225 (416)
T ss_dssp HHHHHTTCEEEEECTTTTTTSC-CCT---------TTTTCSEEECCSSSTTC-CCSSEEEEEE---CHHHHHHHHTC---
T ss_pred HHHHHcCCEEEEECCccccCCC-cch---------hhcCCCEEEecCccccC-CCCCeEEEEE---CHHHHHHhhccccc
Confidence 8899999999999997633321 111 12235788999999743 2345789765 777666654210
Q ss_pred -----------------------------Hh--hccCccc-CCChhHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHH
Q 015283 285 -----------------------------KR--LARPMYS-NPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVR 331 (410)
Q Consensus 285 -----------------------------~~--~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~ 331 (410)
.. ....... +++..++.++...++. +.+. +++.++++++++
T Consensus 226 ~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~~~ 299 (416)
T 3isl_A 226 ERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRL------VLEEGLETRFERHRHHE 299 (416)
T ss_dssp ---------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHH
T ss_pred cccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH------HHHhhHHHHHHHHHHHH
Confidence 00 0011112 3344443333333321 1222 578889999999
Q ss_pred HHHHHHhhhccCCCCCcccccCCc---ceeeec----CCCH-HHHHHhhhcCcEEEcCC------C--eEEecC-CCccc
Q 015283 332 QKLFDSLSAKDKSGKDWSFILRQI---GMFSFT----GLNK-AQSDNMTNKWHVYMTKD------G--RISLAG-LSLAK 394 (410)
Q Consensus 332 ~~l~~~l~~~~g~~~~~~~~~~~~---~~~~~~----~~~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~ 394 (410)
+++.+.|+ +.| +.+..+.. +.+.++ +.+. ++.+.+++++||.+.++ + ||++.. .++++
T Consensus 300 ~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e 374 (416)
T 3isl_A 300 AALAAGIK-AMG----LRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKE 374 (416)
T ss_dssp HHHHHHHH-HTT----CCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHH
T ss_pred HHHHHHHH-HcC----CEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHH
Confidence 99999998 776 34444432 334333 2344 44666666569999875 1 999843 36666
Q ss_pred -HHHHHHHHHHHhhhc
Q 015283 395 -CEYLADAIIDSYHNV 409 (410)
Q Consensus 395 -i~~~~~~l~~~l~~~ 409 (410)
+++++++|+++++++
T Consensus 375 ~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 375 NVLFVLAGLEAVLLRH 390 (416)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 999999999998764
No 130
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.95 E-value=1.6e-26 Score=225.05 Aligned_cols=348 Identities=13% Similarity=0.052 Sum_probs=211.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|......|+. +|.+.+++.+++.... +.|....+..+.++++++++....+ .+.+++++ ++||++
T Consensus 51 ~~~lD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~gGse 123 (460)
T 3gju_A 51 RKSIDAFAGLYCVNVGYG--RQKIADAIATQAKNLA-YYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYF--GLSGSD 123 (460)
T ss_dssp CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHHHHS-CCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEE--ESSHHH
T ss_pred CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHhhCC--CCcCEEEE--eCchHH
Confidence 467899888543345554 5889999888775422 2233333444455555555443322 23578999 999999
Q ss_pred HHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCC-------------CCccceeeec---CCCcccC-----
Q 015283 114 SLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDAR-------------VPWSEYRYYD---PKTVGLD----- 166 (410)
Q Consensus 114 a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~---~~~~~~d----- 166 (410)
|++.+++++... .+++.|++.+|+|.++.......+ ..+..++... .++.+.+
T Consensus 124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 203 (460)
T 3gju_A 124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS 203 (460)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence 999997666543 356999999999987654333221 1223333210 0111222
Q ss_pred ---hhhHHHHHhcC-CCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh
Q 015283 167 ---FEGMIADIKAA-PGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 241 (410)
Q Consensus 167 ---~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 241 (410)
++.+++.+.+. +++++++++.+++|++|. +++.+.+++|.++|++||+++|+||+|.+|+..+ ..+.... .
T Consensus 204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g---~~~~~~~-~ 279 (460)
T 3gju_A 204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLG---TMFGSDH-Y 279 (460)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSCHHHH-H
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---ccchHhh-c
Confidence 57888887632 135677776777888887 6678889999999999999999999999887432 1222222 2
Q ss_pred hcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH---HhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283 242 TRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KRLARPMYSNPPVHGARIVANVVGNPALFDEWK 317 (410)
Q Consensus 242 ~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~ 317 (410)
+..++++ +|||.++ +| +|+||+++ ++++++.+.... .......+.+.+.+++.++...|+..+- .
T Consensus 280 ~~~pdi~---t~sK~l~-gG~~~lg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~ 348 (460)
T 3gju_A 280 GIKPDLI---TIAKGLT-SAYAPLSGVIV---ADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE----M 348 (460)
T ss_dssp TCCCSEE---EECGGGT-TTSSCCEEEEE---EHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH----T
T ss_pred CCCCCee---eeehhhc-CCCCCeEEEEE---CHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh----c
Confidence 2223433 7899997 45 89999755 778666654321 1112222334566666666555542110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------------CHHHHHHhhhcCcEEEcC
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------------NKAQSDNMTNKWHVYMTK 381 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ll~~~gi~v~~ 381 (410)
+..++.++..+..++.+.+.+. +.+. +....+. |.|.++.+ ..++...+++ +||.+.|
T Consensus 349 ~~~~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~ 422 (460)
T 3gju_A 349 DLVTNAGETGAYFRAELAKAVG-GHKN---VGEVRGD-GMLAAVEFVADKDDRVFFDASQKIGPQVATALAA-SGVIGRA 422 (460)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT-TSTT---EEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTEECEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-cCCC---eEEEeee-eEEEEEEEccCccccccccchHHHHHHHHHHHHH-CCeEEec
Confidence 1234555555555666656565 5442 2333343 33433321 1134556665 5999988
Q ss_pred CC-----eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 382 DG-----RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 382 ~g-----Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
++ ||+++ ..+++++++++++|+++++++
T Consensus 423 ~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 456 (460)
T 3gju_A 423 MPQGDILGFAPPLCLTREQADIVVSKTADAVKSV 456 (460)
T ss_dssp CSSSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 64 88844 248999999999999998753
No 131
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.95 E-value=1e-26 Score=223.92 Aligned_cols=326 Identities=15% Similarity=0.085 Sum_probs=208.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|..-+..|+ .+|.+.+++.+++..... ..| +.....++++.+++++ + .+++++ ++||
T Consensus 57 ~~~lD~~~~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~gg 123 (420)
T 2pb2_A 57 KEYIDFAGGIAVTALGH--CHPALVEALKSQGETLWHTSNVF-TNEPALRLGRKLIDAT----F----AERVLF--MNSG 123 (420)
T ss_dssp CEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCCCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEE--ESSH
T ss_pred CEEEEccccccccccCC--CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCeEEE--eCCH
Confidence 45788888753223344 268899998888754211 123 3334456666666663 2 478999 9999
Q ss_pred hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchhh-hhhhCCCC------------ccceeeecCCCcccChhhHHH
Q 015283 112 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 112 t~a~~~~~~~~~~~~-----~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~~ 172 (410)
++|++.+.+++..+. +| ++|++++|+|.++.. .+...|.+ +..++. .|++.+++
T Consensus 124 teA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~ 196 (420)
T 2pb2_A 124 TEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKA 196 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHH
Confidence 999999866553321 56 599999999987644 33444543 122221 37899999
Q ss_pred HHhcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 173 DIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 173 ~i~~~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
.+.+ +++++++++++|++|. +++.+++++|.++|++||+++|+||+|.+++..+ ..+.+.. .+...+++
T Consensus 197 ~i~~---~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g---~~~~~~~-~~~~~dii--- 266 (420)
T 2pb2_A 197 VMDD---HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTG---DLFAYMH-YGVTPDIL--- 266 (420)
T ss_dssp HCCT---TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHH-HTCCCSEE---
T ss_pred Hhcc---CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCC---cHHHHHh-cCCCCCeE---
Confidence 8874 6778887888888884 5899999999999999999999999998876432 2222222 22233444
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
||||.++ +|+|+||+++ ++++++.+.. .....+.+++.+++.++...|+..+- ++..+++++++
T Consensus 267 t~sK~l~-~G~~iG~~~~---~~~l~~~l~~----~~~~~t~~~~~~~~aa~~a~L~~~~~--------~~~~~~~~~~~ 330 (420)
T 2pb2_A 267 TSAKALG-GGFPVSAMLT---TQEIASAFHV----GSHGSTYGGNPLACAVAGAAFDIINT--------PEVLQGIHTKR 330 (420)
T ss_dssp EECGGGG-TTSCCEEEEE---CHHHHTTCC--------CCEECCCHHHHHHHHHHHHHHSS--------HHHHHHHHHHH
T ss_pred Eeccccc-CCCceEEEEE---hHHHHHhhcC----CCcCcccCcCHHHHHHHHHHHHHHHh--------ccHHHHHHHHH
Confidence 7899999 8999999855 6665444322 11122234566666665544432110 24456666777
Q ss_pred HHHHHHhhhcc--CCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCCC----eEEec-CCCcccHHH
Q 015283 332 QKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEY 397 (410)
Q Consensus 332 ~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~g----Ris~~-~~~~~~i~~ 397 (410)
+++.+.|+ ++ +.+. +....+. |.|+++.+ +. ++.+.+++ +||.+.|++ ||+++ ..+++++++
T Consensus 331 ~~l~~~L~-~~~~~~~~-~~~~~~~-g~~~~v~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~~~iRl~~~~~~t~eei~~ 406 (420)
T 2pb2_A 331 QQFVQHLQ-AIDEQFDI-FSDIRGM-GLLIGAELKPKYKGRARDFLYAGAE-AGVMVLNAGADVMRFAPSLVVEEADIHE 406 (420)
T ss_dssp HHHHHHHH-HHHHHHCC-EEEEEEE-TTEEEEEECGGGTTCHHHHHHHHHH-TTEECEESSTTEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHH-HHHhcCCC-eEEEEec-ceEEEEEECCCchHHHHHHHHHHHH-CCCEEEeCCCCEEEEECCCCCCHHHHHH
Confidence 77777776 54 1110 1222333 45555433 23 34566665 699999874 88854 348999999
Q ss_pred HHHHHHHHhhhc
Q 015283 398 LADAIIDSYHNV 409 (410)
Q Consensus 398 ~~~~l~~~l~~~ 409 (410)
++++|+++++++
T Consensus 407 ~~~~l~~~l~~~ 418 (420)
T 2pb2_A 407 GMQRFAQAVGKV 418 (420)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
No 132
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.95 E-value=1.1e-26 Score=226.87 Aligned_cols=358 Identities=12% Similarity=0.092 Sum_probs=224.3
Q ss_pred CCCCCCcccchhHhhh--cCCCCeeeeeeee-eecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhc
Q 015283 15 MAPPDPILGVSEAFKA--DTDEKKLNLGVGA-YRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF 91 (410)
Q Consensus 15 ~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~-~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~ 91 (410)
.+.+..++.+.++... .....+++++.|. ++|...... .+.+.+++.+.+..+. ..|.+..+..++++++++++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ylD~~~~~~-~~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~ 90 (467)
T 1ax4_A 13 MVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTDSG-TNAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN 90 (467)
T ss_dssp EEEECCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCSSS-CCCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC
T ss_pred eeecccccchhHHHHHHHhcCcCcccCCCCceeeecccCcC-CHHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC
Confidence 3444444444443332 2234567777775 344433322 2566666655554433 568777889999999999973
Q ss_pred CCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC----CCCE---EEEcCCCCcchhhhhhhCCCCccceeeec---C-
Q 015283 92 GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF----PGAK---VLISSPTWGNHKNIFNDARVPWSEYRYYD---P- 160 (410)
Q Consensus 92 ~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~----~gd~---Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~- 160 (410)
. +++++ |+||++|+.++...+ .. +||+ |+++.+.|..+...+...|.+++.++... .
T Consensus 91 ~--------~~v~~--t~ggt~A~~~al~~~--~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 158 (467)
T 1ax4_A 91 Y--------DYIIP--AHQGRGAENILFPVL--LKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSE 158 (467)
T ss_dssp C--------CEEEE--ESSHHHHHHHHHHHH--HHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTT
T ss_pred C--------CcEEE--cCCcHHHHHHHHHHH--HHhhccCCCccceEEEeccccchhhHHHhccCCceeccccccccccc
Confidence 2 57888 999999999985544 55 8998 99997777888888888888877665421 1
Q ss_pred ----CCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCC---C------
Q 015283 161 ----KTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG---F------ 225 (410)
Q Consensus 161 ----~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~---~------ 225 (410)
.++.+|++.+++.+++.+ ++++++++++|+||| |.+++.+++++|+++|++||+++|+|+++.. +
T Consensus 159 ~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~ 238 (467)
T 1ax4_A 159 TYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARD 238 (467)
T ss_dssp SCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHC
T ss_pred ccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccc
Confidence 135689999999997521 257888889999999 8999999999999999999999999998432 0
Q ss_pred -CCCCCCCchhHhHH-HhhcCCcEEEEecccccccccCCCc-ceEEEEeCCc-hhHHHHHHHHHhhcc-CcccCCChhHH
Q 015283 226 -ASGSLDNDASSVRL-FATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSS-DLAARVKSQLKRLAR-PMYSNPPVHGA 300 (410)
Q Consensus 226 -~~~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~ 300 (410)
.+.+ .+...+.. ..... .+++.|+||.+|++ + ||+ +.+++ ++++++......... ..+...+....
T Consensus 239 ~~~~~--~~~~~~~~~~~~~~--d~~~~s~sK~~g~~---~Gg~~--~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (467)
T 1ax4_A 239 PKYKN--ATIKEVIFDMYKYA--DALTMSAKKDPLLN---IGGLV--AIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDM 309 (467)
T ss_dssp GGGTT--CCHHHHHHHHGGGC--SEEEEETTSTTCCS---SCEEE--EESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHH
T ss_pred cccCC--Cchhhhhhhhcccc--ceEEEeccccCCCC---cceEE--EeCCHHHHHHHHHhhccccccccccCCccchHH
Confidence 1111 11111100 00112 24568999998765 3 454 33446 777666543322111 11122222222
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC-------CC------HHH
Q 015283 301 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------LN------KAQ 367 (410)
Q Consensus 301 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-------~~------~~~ 367 (410)
.++...+... . + ++..+...++++++.+.|+ +.+ +.+..+.+++++|++ +. .++
T Consensus 310 ~a~~~~l~~~-~-----~--~~~~~~~~~~~~~l~~~L~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (467)
T 1ax4_A 310 AAMVQGLEEG-T-----E--EEYLHYRIGQVKYLGDRLR-EAG----IPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAV 376 (467)
T ss_dssp HHHHHHHHHT-T-----C--HHHHHHHHHHHHHHHHHHH-HTT----CCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHH
T ss_pred HHHHHHHHHh-h-----h--hhHHHHHHHHHHHHHHHHH-hCC----CCcccCCCceEEEEehhhhccccccCCCCHHHH
Confidence 2111122210 0 0 0112222356677888887 654 355567778888765 31 234
Q ss_pred HHHhhhcCcEEEcC------------C-------C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283 368 SDNMTNKWHVYMTK------------D-------G--RISLAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 368 ~~~ll~~~gi~v~~------------~-------g--Ris~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
..++++++||.+.| | + ||+++. .+++++++++++|++++++
T Consensus 377 ~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 440 (467)
T 1ax4_A 377 INALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK 440 (467)
T ss_dssp HHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 55664667999876 2 3 899872 5889999999999988764
No 133
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.95 E-value=4.1e-27 Score=228.91 Aligned_cols=339 Identities=10% Similarity=0.019 Sum_probs=202.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
...+|+..|......|+. +|.+.+++.+++..... ..+.+.....++++.+++++. .. .+ +++ ++||+
T Consensus 49 ~~~lD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~--~~-v~~--~~ggs 117 (452)
T 3n5m_A 49 KRYLDGMSGLWCVNSGYG--RKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLG----GE--YV-IFF--SNSGS 117 (452)
T ss_dssp CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHT----SC--EE-EEE--ESSHH
T ss_pred CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCC----CC--ce-EEE--eCchH
Confidence 468999988653455654 68999999888755321 111123334455555555532 11 34 888 99999
Q ss_pred hHHHHHHHHHHHh---C---CCCEEEEcCCCCcchhhhhhhCCCCcc-------------ceeeecCCCccc-C------
Q 015283 113 GSLRLAAALIERY---F---PGAKVLISSPTWGNHKNIFNDARVPWS-------------EYRYYDPKTVGL-D------ 166 (410)
Q Consensus 113 ~a~~~~~~~~~~~---~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~~~-d------ 166 (410)
+|++.+.+++... . ++|+|++.+|+|.++.......+.... .++..+...... |
T Consensus 118 eA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (452)
T 3n5m_A 118 EANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYD 197 (452)
T ss_dssp HHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGG
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHH
Confidence 9999997766533 4 789999999999887654443332211 111100000000 1
Q ss_pred ---hhhHHHHHh-cCCCCcEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 167 ---FEGMIADIK-AAPGGSFILLHGCA-HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 167 ---~~~l~~~i~-~~~~~~~~ii~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
++.|++.+. ..++++++++++++ +| ||.+. +.+.+++|.++|++||+++|+||+|.+|+..+ ..+....
T Consensus 198 ~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g---~~~~~~~- 272 (452)
T 3n5m_A 198 VECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTG---KAFGFMN- 272 (452)
T ss_dssp CHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGG-
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccc---ccchhhh-
Confidence 788988887 22246777777777 89 99766 77779999999999999999999999987432 1111111
Q ss_pred hhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHH--HHHhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283 241 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKS--QLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK 317 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~ 317 (410)
.+...++ .+|||.++. | +|+||+++ ++++++.+.. .........+.+.+.+++.++...|+..+-
T Consensus 273 ~~~~~di---~t~sK~l~~-G~~~ig~~~~---~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----- 340 (452)
T 3n5m_A 273 YDVKPDI---ITMAKGITS-AYLPLSATAV---KREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN----- 340 (452)
T ss_dssp TTCCCSE---EEECGGGGT-TSSCCEEEEE---EHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH-----
T ss_pred cCCCCCE---EeecccccC-CCcceEEEEE---CHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh-----
Confidence 1122233 378999985 9 99999855 7774444321 001111122334566666666555542110
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceeeecCC----------C----HHHHHHhhhcCcEEEc
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL----------N----KAQSDNMTNKWHVYMT 380 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~----------~----~~~~~~ll~~~gi~v~ 380 (410)
+...++++++.+++.+.|.+ ..+. +....+. |.|.++.+ + .++...+++ .||.+.
T Consensus 341 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~ 412 (452)
T 3n5m_A 341 ---ENLIERSAQMGSLLLEQLKEEIGEHPL---VGDIRGK-GLLVGIELVNDKETKEPIDNDKIASVVNACKE-KGLIIG 412 (452)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHHHHTTCTT---EEEEEES-SSCEEEEEEEETTTTEECCHHHHHHHHHHHHH-TTEECE
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHhcCCC---eEEEEEE-EEEEEEEEecCCcccCCCCHHHHHHHHHHHHH-CCcEEe
Confidence 12334444444444444440 3321 2233344 33433322 1 234556665 699998
Q ss_pred CCC----------eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 381 KDG----------RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 381 ~~g----------Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
|++ ||+++. .+++++++++++|++++++
T Consensus 413 ~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 413 RNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp ECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred ecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 752 886443 4899999999999999875
No 134
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=2.8e-26 Score=217.55 Aligned_cols=312 Identities=14% Similarity=0.109 Sum_probs=201.8
Q ss_pred cccHHHHHHHHHhhccCCCccCcCC--cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC
Q 015283 52 YVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 129 (410)
Q Consensus 52 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd 129 (410)
.+++.+.+++.+.... .+.+. .-..++++.+++++ +.+.+.+.+++ ++||+++++++. ...+.+||
T Consensus 29 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~----g~~~~~~~i~~--~~ggt~al~~~~--~~~~~~gd 96 (376)
T 3f0h_A 29 MSSEEVRAIGAEQVPY----FRTTEFSSTMLENEKFMLEYA----KAPEGSKAVFM--TCSSTGSMEAVV--MNCFTKKD 96 (376)
T ss_dssp CCCHHHHHHHTSCCCC----CSSHHHHHHHHHHHHHHHHHH----TCCTTCEEEEE--SSCHHHHHHHHH--HHHCCTTC
T ss_pred CCcHHHHHHhcCCCCC----CCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEE--cCChhHHHHHHH--HhccCCCC
Confidence 3478999888765422 12121 22345556666654 33222244555 888999999984 33467999
Q ss_pred EEEEcCCCCcchh--hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283 130 KVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 207 (410)
Q Consensus 130 ~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~ 207 (410)
+|++++|+|.++. ..+...|.+++.++. +.++.+|++.+++.+.. +++++++++|+||||.+++ +++|.+
T Consensus 97 ~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~---l~~i~~ 168 (376)
T 3f0h_A 97 KVLVIDGGSFGHRFVQLCEIHEIPYVALKL--EHGKKLTKEKLYEYDNQ---NFTGLLVNVDETSTAVLYD---TMMIGE 168 (376)
T ss_dssp CEEEEESSHHHHHHHHHHHHTTCCEEEEEC--CTTCCCCHHHHHTTTTS---CCCEEEEESEETTTTEECC---HHHHHH
T ss_pred eEEEEeCChhhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHhhcc---CceEEEEecccCCcceecC---HHHHHH
Confidence 9999998776543 346678999988887 34578999999887653 6777888999999999888 778888
Q ss_pred HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHH---
Q 015283 208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQ--- 283 (410)
Q Consensus 208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~--- 283 (410)
+|++||+++|+|++|..+... . .+. ..+.++++.|+||.++ ++| +|++++ ++++++++...
T Consensus 169 l~~~~~~~li~D~~~~~~~~~---~---~~~----~~~~d~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~~~~~~~ 233 (376)
T 3f0h_A 169 FCKKNNMFFVCDCVSAFLADP---F---NMN----ECGADVMITGSQKVLACPPG--ISVIVL---APRGVERVEKSKVR 233 (376)
T ss_dssp HHHHTTCEEEEECTTTTTTSC---C---CHH----HHTCSEEEEETTTTTCCCSS--CEEEEE---CHHHHHHHHTCCCC
T ss_pred HHHHcCCEEEEEcCccccCcc---c---ccc----ccCccEEEecCcccccCCCc--eEEEEE---CHHHHHHhhcCCCC
Confidence 899999999999997765432 1 111 1124688899999998 556 577654 77765554321
Q ss_pred ---------HHhhccC-cccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015283 284 ---------LKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 352 (410)
Q Consensus 284 ---------~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 352 (410)
....... +...++..+..++...+.. + . .+ .+++.+++++++++++.+.|+ +++ +.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~-~--~~~~~~~~~~~~~~~~~~l~~~L~-~~~----~~~~~ 303 (376)
T 3f0h_A 234 TMYFDLKDALKNQERGQTPFTPAVGILLQINERLKE--I-K--KHGGADAEVARIASQAADFRAKIK-DLP----FELVS 303 (376)
T ss_dssp CSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH--H-H--HTTHHHHHHHHHHHHHHHHHHHTT-TSS----EEECC
T ss_pred ceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHH--H-H--HhcCHHHHHHHHHHHHHHHHHHHH-HcC----CccCc
Confidence 0000001 1123333221222222210 0 0 11 256788888999999999998 776 33333
Q ss_pred CC--cceeeec--CCCH-HHHHHhhhcCcEEEcCCC--------eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 353 RQ--IGMFSFT--GLNK-AQSDNMTNKWHVYMTKDG--------RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 353 ~~--~~~~~~~--~~~~-~~~~~ll~~~gi~v~~~g--------Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
+. ...+.+. +.+. ++.+.+.+++||.+.++. ||++.. .+++++++++++|++++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 304 ESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp SSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred cccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 32 2222332 3444 456677665699998752 999863 4899999999999999864
No 135
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.95 E-value=5.3e-27 Score=227.87 Aligned_cols=341 Identities=13% Similarity=-0.004 Sum_probs=195.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|......|+. +|.+.+++.+++... .+|....+..+.++++++++....+.. ..+++++ ++||++
T Consensus 64 ~~ylD~~~~~~~~~lGh~--~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~--~~sGse 136 (453)
T 4ffc_A 64 NSFIDLGAGIAVTTVGAS--HPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTAL--FNSGAE 136 (453)
T ss_dssp CEEEESSHHHHTCTTCTT--CHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEE--ESSHHH
T ss_pred CEEEEcCCCcccCcCCCC--CHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEE--eCcHHH
Confidence 356888877553344543 689999988877542 223222233344444444433322211 1468999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCC--------------CCccceeeecC--CCcccC--------hhh
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR--------------VPWSEYRYYDP--KTVGLD--------FEG 169 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g--------------~~~~~v~~~~~--~~~~~d--------~~~ 169 (410)
|++.++++.....+++.|++.+++|.++.......+ ..+..++.... +.++.+ ++.
T Consensus 137 A~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 216 (453)
T 4ffc_A 137 AVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISR 216 (453)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHH
Confidence 999997665444466899999999987654433221 12333443210 111222 244
Q ss_pred HHHHHhcCCCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 170 MIADIKAAPGGSFILLHGCAHNPTG--IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 170 l~~~i~~~~~~~~~ii~~~p~NPtG--~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+++.+.. .+..++++.|.|++| ..++.+.+++|.++|++||+++|+||+|.+|+..+ ..+.... .+...+
T Consensus 217 l~~~i~~---~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g---~~~a~~~-~~~~pd- 288 (453)
T 4ffc_A 217 IETQIGA---QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTG---AWFASEH-EGIVPD- 288 (453)
T ss_dssp HHHHTCG---GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHH-HTCCCS-
T ss_pred HHHhcCC---CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccc---ccchhhh-cCCCcc-
Confidence 4444432 344444467777776 34477779999999999999999999999886432 1222222 122223
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
+.+|||.++. |+|+||+++ ++++++. +.......+.+.+.+++.++...|+..+- .+..++.++..
T Consensus 289 --i~t~sK~~~~-G~~~G~~~~---~~~i~~~----~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~ 354 (453)
T 4ffc_A 289 --IVTMAKGIAG-GMPLSAVTG---RAELMDA----VYAGGLGGTYGGNPVTCAAAVAALGVMRE----LDLPARARAIE 354 (453)
T ss_dssp --EEEECGGGGT-TSSCEEEEE---EHHHHTT----SCTTSSCCSSSSCHHHHHHHHHHHHHHHH----TTHHHHHHHHH
T ss_pred --hHhhhhhhcC-CcCeEEEEE---CHHHHhh----hcccCcCCCCCcCHHHHHHHHHHHHHhhh----hhHHHHHHHHH
Confidence 3478999985 999999855 7774444 33222233345666677666555542110 01112222223
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--------C----HHHHHHhhhcCcEEEcCCC------eEEecC
Q 015283 328 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--------N----KAQSDNMTNKWHVYMTKDG------RISLAG 389 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~ll~~~gi~v~~~g------Ris~~~ 389 (410)
+..++.+.+.+. ..+. +....+ .|.|.++.+ + ..+...+++ +||.+.|++ ||+++.
T Consensus 355 ~~l~~~l~~~~~-~~~~---~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~iRi~~~~ 428 (453)
T 4ffc_A 355 ASVTSRLSALAE-EVDI---IGEVRG-RGAMLAIEIVKPGTLEPDAALTKSIAAEALS-QGVLILTCGTFGNVIRLLPPL 428 (453)
T ss_dssp HHHHHHHHHHHH-HCSS---EEEEEE-ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECCEECTTSCEEEECCCT
T ss_pred HHHHHHHHHHHh-hCCC---eEEEEe-eceEEEEEEecCcccCCCHHHHHHHHHHHHh-CCCEEecCCCCCCEEEEECCC
Confidence 333333333333 3331 222233 345555432 1 233455555 699998864 777553
Q ss_pred -CCcccHHHHHHHHHHHhhhc
Q 015283 390 -LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 390 -~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+++++++++++|+++++++
T Consensus 429 ~~t~e~i~~~l~~l~~~l~~~ 449 (453)
T 4ffc_A 429 VIGDDLLDEGITALSDIIRAK 449 (453)
T ss_dssp TCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 48999999999999998764
No 136
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.95 E-value=2.2e-26 Score=224.07 Aligned_cols=347 Identities=11% Similarity=-0.012 Sum_probs=207.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|......|+. +|.+.+++.+.+.... ..|....+..+.++++++++....+ ...++|++ ++||++
T Consensus 50 ~~ylD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~ggse 122 (459)
T 4a6r_A 50 NKIIDGMAGLWCVNVGYG--RKDFAEAARRQMEELP-FYNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFY--TNSGSE 122 (459)
T ss_dssp CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHHHCS-CCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEE--ESSHHH
T ss_pred CEEEECCCchhcccCCCC--CHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCchHH
Confidence 467899888653455554 6899999888775422 2233333344555555555544332 23578999 999999
Q ss_pred HHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCCCC-------------ccceeeec--C-CCcccC-----
Q 015283 114 SLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARVP-------------WSEYRYYD--P-KTVGLD----- 166 (410)
Q Consensus 114 a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~--~-~~~~~d----- 166 (410)
+++.+.+++... .+++.|++.+|+|.++.......+.. +..++... . ..+ .|
T Consensus 123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~ 201 (459)
T 4a6r_A 123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG 201 (459)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence 999987666443 25799999999998876544432221 12222100 0 111 23
Q ss_pred ---hhhHHHHHhcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh
Q 015283 167 ---FEGMIADIKAAP-GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 241 (410)
Q Consensus 167 ---~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 241 (410)
++++++.+.+.. +++.++++.+++|++|. +++.+.+++|.++|++||+++|+||+|.+|+..+ ..+.... .
T Consensus 202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G---~~~~~~~-~ 277 (459)
T 4a6r_A 202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTG---EWFGHQH-F 277 (459)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHH-H
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---ccchHhh-c
Confidence 678888886422 34566665555666666 4588889999999999999999999999987432 1222222 2
Q ss_pred hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 015283 242 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 321 (410)
Q Consensus 242 ~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~ 321 (410)
+..++++ +|||.++.+|+|+||+++ ++++++.+... .......+.+.+.+++.++...|+..+- .+..+
T Consensus 278 ~~~pdi~---t~sK~l~gg~~~lg~v~~---~~~i~~~~~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~ 346 (459)
T 4a6r_A 278 GFQPDLF---TAAKGLSSGYLPIGAVFV---GKRVAEGLIAG-GDFNHGFTYSGHPVCAAVAHANVAALRD----EGIVQ 346 (459)
T ss_dssp TCCCSEE---EECGGGGTTSSCCEEEEE---CHHHHHHHHHH-CTTHHHHHHCSCHHHHHHHHHHHHHHHH----TCHHH
T ss_pred CCCCCee---ehhhhhcCCCCCccceee---CHHHHHHhhcC-CCcccCCCCCCCHHHHHHHHHHHHHHhc----chHHH
Confidence 2233433 689999855599999755 88876666531 1111112234556666666555542110 01122
Q ss_pred HHH-HHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----------------CHHHHHHhhhcCcEEEcCCC-
Q 015283 322 MMA-GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------------NKAQSDNMTNKWHVYMTKDG- 383 (410)
Q Consensus 322 ~~~-~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ll~~~gi~v~~~g- 383 (410)
+.+ +.....++.|.+.|. +.+. +....+.+ .|.++.+ ..++...+++ +||.+.|+|
T Consensus 347 ~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~g~ 420 (459)
T 4a6r_A 347 RVKDDIGPYMQKRWRETFS-RFEH---VDDVRGVG-MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFR-NNLIMRACGD 420 (459)
T ss_dssp HHHHTHHHHHHHHHHHHHT-TCTT---EEEEEEET-TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHH-TTEECEEETT
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCC---eEEEEEEE-EEEEEEEecCccccccccchHHHHHHHHHHHHH-CCeEEecCCC
Confidence 333 333334444434444 3331 23334443 3433321 1234556665 599999976
Q ss_pred --eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 384 --RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 --Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++. .+++++++++++|+++++++
T Consensus 421 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 449 (459)
T 4a6r_A 421 HIVSAPPLVMTRAEVDEMLAVAERCLEEF 449 (459)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 888442 49999999999999988653
No 137
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=2.1e-26 Score=218.91 Aligned_cols=316 Identities=13% Similarity=0.051 Sum_probs=209.0
Q ss_pred ccccHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh---
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--- 125 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--- 125 (410)
..+++.+.+++.+.... .|.+ .....++++++++++....+ ++++++++ ++||++++.++.. ...
T Consensus 14 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~--~~g~t~al~~~~~--~~~~~~ 83 (385)
T 2bkw_A 14 IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVL--AGSGTLGWDIFAS--NFILSK 83 (385)
T ss_dssp CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEE--ESCTTHHHHHHHH--HHSCTT
T ss_pred cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEE--cCchHHHHHHHHH--HHhccC
Confidence 33578888877664422 1222 12466889999999765433 34678999 9999999999843 334
Q ss_pred CCCCEEEEc-CCCCcchh-hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283 126 FPGAKVLIS-SPTWGNHK-NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 203 (410)
Q Consensus 126 ~~gd~Vl~~-~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~ 203 (410)
.+||+|+++ .|+|..+. ..++..|.+++.+++. +.++.+|++.+++.+++ .+++++++++|+||||.+.+ ++
T Consensus 84 ~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~---l~ 157 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQ--NSYGAVTVTHVDTSTAVLSD---LK 157 (385)
T ss_dssp CSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHH--SCCSEEEEESEETTTTEECC---HH
T ss_pred CCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhc--CCCCEEEEEccCCCcCeEcC---HH
Confidence 799999888 45666553 6677889999888872 24567899999999875 24556777899999999887 56
Q ss_pred HHHHHHHHc--CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc-cccCCCcceEEEEeCCchhHH-H
Q 015283 204 KIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAA-R 279 (410)
Q Consensus 204 ~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~l~~~~~~~~~~~-~ 279 (410)
+|+++|++| |+++|+|++|..... .. .+ ...+.++++.|+||.+ |++|+ ||+++ +++.++ +
T Consensus 158 ~i~~~~~~~~~~~~li~D~a~~~~~~---~~---~~----~~~~~d~~~~s~~K~~~~~~G~--G~~~~---~~~~~~~~ 222 (385)
T 2bkw_A 158 AISQAIKQTSPETFFVVDAVCSIGCE---EF---EF----DEWGVDFALTASQKAIGAPAGL--SISLC---SSRFMDYA 222 (385)
T ss_dssp HHHHHHHHHCTTSEEEEECTTTTTTS---CC---CT----TTTTCSEEEEESSSTTCCCSCE--EEEEE---CHHHHHHH
T ss_pred HHHHHHHhhCCCCEEEEECccccCCc---cc---cc----cccCceEEEecCccccccCCcc--eEEEE---cHHHHHHH
Confidence 888889999 999999999863221 11 11 1223568889999966 45664 89855 666555 4
Q ss_pred HH------------------HHHHhhcc--Ccc-cCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 015283 280 VK------------------SQLKRLAR--PMY-SNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 280 ~~------------------~~~~~~~~--~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 337 (410)
+. ........ ..+ .+++..++.++...++.. .+ .+++.+++++++++++.+.
T Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~~l~~~ 296 (385)
T 2bkw_A 223 LNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEI------LEEGLHKRWDLHREMSDWFKDS 296 (385)
T ss_dssp TCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH------HHHCHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH------HHccHHHHHHHHHHHHHHHHHH
Confidence 31 11111111 111 234444444333333211 11 2467788889999999999
Q ss_pred h-hhccCCCCCcccccC-----CcceeeecCCC-H-HHHHHhhhcCcEEEcCC-------C--eEE-ec----CCCcccH
Q 015283 338 L-SAKDKSGKDWSFILR-----QIGMFSFTGLN-K-AQSDNMTNKWHVYMTKD-------G--RIS-LA----GLSLAKC 395 (410)
Q Consensus 338 l-~~~~g~~~~~~~~~~-----~~~~~~~~~~~-~-~~~~~ll~~~gi~v~~~-------g--Ris-~~----~~~~~~i 395 (410)
| + +++ +.+..+ ..+.++|+.+. . ++.+++. ++||.+.++ + ||+ ++ ..+++++
T Consensus 297 L~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i 370 (385)
T 2bkw_A 297 LVN-GLQ----LTSVSRYPSNMSAHGLTAVYVADPPDVIAFLK-SHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYM 370 (385)
T ss_dssp HHT-TTC----CEESSCSSSTTBCSSCEEEECSCHHHHHHHHH-HTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHH
T ss_pred HHH-hcC----ceecccCcccccCCceEEEecCCHHHHHHHHH-HCCeEEeCCCCcccCCCEEEEEccccccccCCHHHH
Confidence 9 8 765 344332 23556665542 3 3455554 579999875 1 999 65 2589999
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
++++++|+++++++
T Consensus 371 ~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 371 KNCFDLIKLALQRK 384 (385)
T ss_dssp HHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 138
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.95 E-value=1.1e-26 Score=224.80 Aligned_cols=340 Identities=11% Similarity=0.022 Sum_probs=205.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|.+....|+ .+|.+.+++.+.+.... ...| +.....++++.+++++. . ++++|++ ++||
T Consensus 43 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~----~--~~~~v~~--~~gg 111 (433)
T 1zod_A 43 RAILDFTSGQMSAVLGH--CHPEIVSVIGEYAGKLDHLFSEM-LSRPVVDLATRLANITP----P--GLDRALL--LSTG 111 (433)
T ss_dssp CEEEETTHHHHTCTTCB--TCHHHHHHHHHHHHHCCCCCTTC-CCHHHHHHHHHHHHHSC----T--TCCEEEE--ESCH
T ss_pred CEEEEcccchhccccCC--CCHHHHHHHHHHHHhCccccccc-CCHHHHHHHHHHHHhCC----C--CcCEEEE--eCch
Confidence 35678877764223343 26889998888774421 1233 23334567777776632 1 2578999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhC------------CCCccceeeecC--CCc--------ccChhh
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA------------RVPWSEYRYYDP--KTV--------GLDFEG 169 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~------------g~~~~~v~~~~~--~~~--------~~d~~~ 169 (410)
+++++.+.+++..+.++|+|++.+|+|.++....... ...+..++.... ..+ .+|++.
T Consensus 112 ~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~ 191 (433)
T 1zod_A 112 AESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDY 191 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHH
Confidence 9999998665433345689999999997764422211 012223322110 011 246899
Q ss_pred HHHHHhcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 170 MIADIKAAP-GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 170 l~~~i~~~~-~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+++.+++.. ++++++++++.+||||. +++.+++++|.++|++||+++|+||+|.+|+..+ ....+.. .....++
T Consensus 192 le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g---~~~~~~~-~~~~~di 267 (433)
T 1zod_A 192 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG---TMFACQR-DGVTPDI 267 (433)
T ss_dssp HHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHH-HTCCCSE
T ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---hHhHHhh-cCCCCCE
Confidence 998887421 35556664444688996 5788889999999999999999999999886432 1112212 1222333
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 327 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 327 (410)
.|+||.++. |+|+||+++ ++++++.+... ......+.+.+.+++.++...|+.. .+ +...+++
T Consensus 268 ---~s~sK~~~~-G~~ig~~~~---~~~~~~~~~~~--~~~~~~t~~~~~~~~~a~~aal~~~------~~--~~~~~~~ 330 (433)
T 1zod_A 268 ---LTLSKTLGA-GLPLAAIVT---SAAIEERAHEL--GYLFYTTHVSDPLPAAVGLRVLDVV------QR--DGLVARA 330 (433)
T ss_dssp ---EEECHHHHT-TSSCEEEEE---CHHHHHHHHHT--TCCCCCTTTTCHHHHHHHHHHHHHH------HH--TTHHHHH
T ss_pred ---EEecccccC-CCCeeEEEE---hHHHHHhhccC--CCCCCCCCCcCHHHHHHHHHHHHHH------Hh--CCHHHHH
Confidence 389999995 999999865 77766555431 1111122345566666555444311 00 1234555
Q ss_pred HHHHHHHHHHhhhccC--CCCCcccccCCcceeeecCC-------------CHHHHHHhhhcCcEEEcCC------C--e
Q 015283 328 KNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKD------G--R 384 (410)
Q Consensus 328 ~~~~~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~gi~v~~~------g--R 384 (410)
+++++++.+.|+ ++. .+. +....+. |.|+|+.+ ..++...+++ +||.+.|+ + |
T Consensus 331 ~~~~~~l~~~l~-~l~~~~~~-~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~~~lR 406 (433)
T 1zod_A 331 NVMGDRLRRGLL-DLMERFDC-IGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECMN-LGLSMNIVQLPGMGGVFR 406 (433)
T ss_dssp HHHHHHHHHHHH-HHHHHCTT-EEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHHH-TTEECCEECCTTSCCEEE
T ss_pred HHHHHHHHHHHH-HHHHhCCC-eEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHH-CCCeEeccCCCCCCCEEE
Confidence 556666666665 431 100 2223333 45555532 1234556664 69999875 3 8
Q ss_pred EEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 385 ISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 385 is~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|+++ ..+++++++++++|+++++++
T Consensus 407 i~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 407 IAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 8654 248999999999999998764
No 139
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.94 E-value=8.6e-26 Score=215.95 Aligned_cols=228 Identities=13% Similarity=0.083 Sum_probs=162.0
Q ss_pred eeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHH
Q 015283 38 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 115 (410)
Q Consensus 38 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~ 115 (410)
+++.|.| |....+++.+.+.+++...........|. +.....++++.+++++.. + +.++ +.+|++++
T Consensus 24 ~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-------~-~~i~--~~sG~~a~ 92 (398)
T 2rfv_A 24 TGALSTP-IFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG-------E-AGLA--TASGISAI 92 (398)
T ss_dssp TCCSSCC-CCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTC-------S-EEEE--ESSHHHHH
T ss_pred CCCcCCC-CcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCC-------C-cEEE--ECCHHHHH
Confidence 5788887 66666666788877766322221113343 456678899999998632 2 4444 57788999
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 116 RLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 116 ~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
..+. ...+.+||+|+++.|+|.++...+ +..|.+++.++. .|++++++.+++ +++++++++|+|
T Consensus 93 ~~~l--~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~i~~---~~~~v~~~~~~n 160 (398)
T 2rfv_A 93 TTTL--LTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA-------AKPEEIRAAMRP---ETKVVYIETPAN 160 (398)
T ss_dssp HHHH--HHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT-------TSHHHHHHHCCT---TEEEEEEESSBT
T ss_pred HHHH--HHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC-------CCHHHHHHhcCC---CCeEEEEECCCC
Confidence 9874 333679999999999999987766 778988888876 278999988874 678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEE
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVV 270 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~ 270 (410)
|||.+++ +++|+++|++||+++|+||+|..+.+.. .. ..+.++++.|+||.++.+|+|+ ||+++
T Consensus 161 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~------~~-----~~~~di~~~s~sK~~~~~g~~~~G~~~~- 225 (398)
T 2rfv_A 161 PTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ------PL-----QLGADIVVHSVTKYINGHGDVIGGIIVG- 225 (398)
T ss_dssp TTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC------GG-----GGTCSEEEEETTTTTTCSSCCCCEEEEE-
T ss_pred CCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC------ch-----hhCCcEEEEeCcccccCCCCceEEEEEE-
Confidence 9999886 7788888999999999999988766421 11 1146789999999999899998 99755
Q ss_pred eCCchhHH-HHHHHHHhhccCc-ccCCChhHHHHHHHHhCC
Q 015283 271 CSSSDLAA-RVKSQLKRLARPM-YSNPPVHGARIVANVVGN 309 (410)
Q Consensus 271 ~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~ 309 (410)
+++.++ .+.... ... ..+.+...+.++...|+.
T Consensus 226 --~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~ 260 (398)
T 2rfv_A 226 --KQEFIDQARFVGL----KDITGGCMSPFNAWLTLRGVKT 260 (398)
T ss_dssp --CHHHHHHHHHTHH----HHTTCCCCCHHHHHHHHHHHTT
T ss_pred --CHHHHHHHHHHHH----HhCCCCCCCHHHHHHHHhhhhh
Confidence 666554 333221 112 234556666666666654
No 140
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.94 E-value=2.4e-26 Score=217.71 Aligned_cols=315 Identities=13% Similarity=0.054 Sum_probs=196.8
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
+++|++.|.+ .+++++.+.+++.. + ..+ ..+++.+++++.+.+|.. +++++++ ++||+++
T Consensus 29 ~v~~~~~~~~-----~~~~~~~v~~a~~~-----~-~~~------~~~~~~~~~~~a~~~g~~-~~~~~~~--~~ggt~a 88 (374)
T 2aeu_A 29 ALYDLSGLSG-----GFLIDEKDKALLNT-----Y-IGS------SYFAEKVNEYGLKHLGGD-ENDKCVG--FNRTSSA 88 (374)
T ss_dssp GCEECSSCCC-----CCCCCHHHHHHHTS-----T-THH------HHHHHHHHHHHHHHHTCC-TTEEEEE--ESSHHHH
T ss_pred ceeeecccCC-----CCCCCHHHHHHHHH-----h-cCc------hHHHHHHHHHHHHHhCCC-CcceEEE--EcChHHH
Confidence 6889887764 34458899888751 1 111 233334443332222221 2467888 8999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEE-EEeCCCC
Q 015283 115 LRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI-LLHGCAH 190 (410)
Q Consensus 115 ~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~-ii~~~p~ 190 (410)
+..+.. .+ +||+|++++|+|+++.. .++..|++++.+ .|++.+++. . +++++ +++++|+
T Consensus 89 ~~~~~~---~~-~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~---~~~~~~v~~~~p~ 151 (374)
T 2aeu_A 89 ILATIL---AL-KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-I---DKDTLVIITGSTM 151 (374)
T ss_dssp HHHHHH---HH-CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-C---CTTEEEEEECBCT
T ss_pred HHHHHH---hC-CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-C---CCccEEEEEccCC
Confidence 999743 34 99999999999887654 566788887766 277888776 3 36677 7889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEE
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 270 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~ 270 (410)
||||. +..++++|.++|++||+++|+||+|..+..++. ...... .. ..+++++|+||.+ +|+|+||+++
T Consensus 152 nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~----~~-~~di~~~S~sK~l--~g~~~G~~~~- 220 (374)
T 2aeu_A 152 DLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLF-NQPPAL----KL-GADLVVTSTDKLM--EGPRGGLLAG- 220 (374)
T ss_dssp TSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHT-TCCCHH----HH-TCSEEEEETTSSS--SSCSCEEEEE-
T ss_pred CCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccc-ccCCcc----cc-CCcEEEecCcccc--cCcceEEEEE-
Confidence 99996 689999999999999999999999866531000 000011 11 2468899999985 5789999755
Q ss_pred eCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH----HHHHHHHHHhhhccCCCC
Q 015283 271 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK----NVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~g~~~ 346 (410)
++++++++..... ....+++.+.+.++...|..... +.+++..+..+ ++++.+.+.|. .+....
T Consensus 221 --~~~~~~~l~~~~~----~~~~~~~~~~~~a~~~al~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~ 288 (374)
T 2aeu_A 221 --KKELVDKIYIEGT----KFGLEAQPPLLAGIYRALKNFNL-----ERIRKAFERAKNFDLSKIEKLNKELK-AIDDNI 288 (374)
T ss_dssp --EHHHHHHHHHHHH----TTTCBCCHHHHHHHHHHHHHCCH-----HHHHHHHHHHHHCCCHHHHHHHHHHT-TTCTTE
T ss_pred --CHHHHHHHHHhhc----cccCCCCHHHHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhcc
Confidence 6787666654332 12224556666666555543211 01112222222 22555666665 431000
Q ss_pred Cccc-ccCCcceeeecCCCH--H------HHHHhhhcCcEEEcCCC---------eEEecCC--CcccHHHHHHHHHHHh
Q 015283 347 DWSF-ILRQIGMFSFTGLNK--A------QSDNMTNKWHVYMTKDG---------RISLAGL--SLAKCEYLADAIIDSY 406 (410)
Q Consensus 347 ~~~~-~~~~~~~~~~~~~~~--~------~~~~ll~~~gi~v~~~g---------Ris~~~~--~~~~i~~~~~~l~~~l 406 (410)
.+.+ ..+.+.++.|..... + ++.++++++||.+.|+. ||+++.. ++.+++++.+.|++++
T Consensus 289 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l 368 (374)
T 2aeu_A 289 NIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESI 368 (374)
T ss_dssp EEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHH
T ss_pred CcceeeCCceEEEEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHH
Confidence 1333 345555556654432 1 45577777799998861 9998752 2335899999999888
Q ss_pred hhc
Q 015283 407 HNV 409 (410)
Q Consensus 407 ~~~ 409 (410)
+++
T Consensus 369 ~~~ 371 (374)
T 2aeu_A 369 KMA 371 (374)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 141
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.94 E-value=1.1e-27 Score=229.17 Aligned_cols=318 Identities=12% Similarity=0.029 Sum_probs=187.9
Q ss_pred CcccccHHHHHHHHHhhccC---CCccCc----CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHH
Q 015283 49 LQPYVLDVVKKAENLMLERG---ENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAAL 121 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~---~~~~y~----~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~ 121 (410)
+..++++.+.+++.+.+... ....|. ......++++.+++++.. +++++++ ++||++++.+++..
T Consensus 28 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~------~~~~v~~--~~g~t~al~~~~~~ 99 (400)
T 3vax_A 28 ATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSA------EPDELIF--TSGATESNNIALLG 99 (400)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTC------CGGGEEE--ESCHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCC------CCCcEEE--eCCHHHHHHHHHHH
Confidence 44455789999888776321 001121 123356777777777532 2678999 99999999998543
Q ss_pred HHH--hCCCC-EEEEcCCCCcchhhhhh---hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCC
Q 015283 122 IER--YFPGA-KVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI 195 (410)
Q Consensus 122 ~~~--~~~gd-~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~ 195 (410)
+.. ..+|| .|+++.++|+++...+. ..|++++.++. ..++.+|++++++.+.+ +++++++++|+||||.
T Consensus 100 l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~ 174 (400)
T 3vax_A 100 LAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTP--GPSGRISVEGVMERLRP---DTLLVSLMHVNNETGV 174 (400)
T ss_dssp THHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECC--CTTCCCCHHHHHTTCCT---TEEEEECCSBCTTTCB
T ss_pred HHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEcc--CCCCCcCHHHHHHhcCC---CceEEEEECCCCCcee
Confidence 311 15899 99999999998766554 46889998887 34677899999998875 7888999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283 196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 275 (410)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~ 275 (410)
+.+ +++|.++|+++|+++|+|++|..... ... .... .++++.|+||.+|++| +|++++ ..+++
T Consensus 175 ~~~---l~~i~~la~~~~~~li~D~a~~~~~~------~~~----~~~~-~d~~~~s~~K~~g~~g--~g~~~~-~~~~~ 237 (400)
T 3vax_A 175 IQP---VAELAQQLRATPTYLHVDAAQGYGKV------PGD----LTTP-IDMISISGHKIGAPKG--VGALVT-RRREE 237 (400)
T ss_dssp BCC---HHHHHHHHTTSSCEEEEECTTTTTTS------GGG----GGSC-CSEEEEETGGGTSCSS--CEEEEE-CBCSS
T ss_pred eCc---HHHHHHHHHhcCCEEEEEhhhhcCCC------CcC----hhhc-CcEEEEeHHHhCCCCc--eEEEEE-ecchh
Confidence 877 56788889999999999999864321 111 1122 5688999999877655 577630 33421
Q ss_pred hH---HHHHHHHH---hhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015283 276 LA---ARVKSQLK---RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 349 (410)
Q Consensus 276 ~~---~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 349 (410)
+. +.+...+. .........++..++.++...++. +.+.+++.+++++++++++.+.|+ ..+ +.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~-~~~----~~ 306 (400)
T 3vax_A 238 MDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI------FEAEHAQWQVAAQDLRSRLLAGLA-STS----FQ 306 (400)
T ss_dssp STTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH------HHHSHHHHHHHHHHHHHHHHHHHT-TTT----CE
T ss_pred ccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH------HHhhHHHHHHHHHHHHHHHHHhhC-CCC----EE
Confidence 11 00111010 000011123344333333333321 123457888889999999999886 444 34
Q ss_pred cccCCc---ceeeec---CCCHHHHHHhhhcCcEEEcCC-------------------------C--eEEe-cC-CCccc
Q 015283 350 FILRQI---GMFSFT---GLNKAQSDNMTNKWHVYMTKD-------------------------G--RISL-AG-LSLAK 394 (410)
Q Consensus 350 ~~~~~~---~~~~~~---~~~~~~~~~ll~~~gi~v~~~-------------------------g--Ris~-~~-~~~~~ 394 (410)
+..+.. +.++++ +.+.+.+.+.+. +||.+.+| + ||++ +. .++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~ 385 (400)
T 3vax_A 307 VNGDQDHVVPHILNLSFEDVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLD 385 (400)
T ss_dssp ECSCTTSBCTTEEEEECTTCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC------
T ss_pred EeCCcccCCCCEEEEEeCCCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHH
Confidence 444432 222222 345555444444 69988774 4 9999 53 47899
Q ss_pred HHHHHHHHHHHhhh
Q 015283 395 CEYLADAIIDSYHN 408 (410)
Q Consensus 395 i~~~~~~l~~~l~~ 408 (410)
+++++++|++++++
T Consensus 386 i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 386 VEELARGVAKLKPS 399 (400)
T ss_dssp --------------
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998764
No 142
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.94 E-value=6.4e-26 Score=217.39 Aligned_cols=325 Identities=14% Similarity=0.130 Sum_probs=208.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCc---ccHH--HHH-----HHHHHhcCCCCCcccCCce
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---GLAA--FNK-----VTAELLFGADNSVLKEQRV 103 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~~~--lr~-----aia~~~~~~~~~~~~~~~i 103 (410)
.+.|+|..|.+ +. ++.+.+++.+.+.......|+... |.+. +++ .+++++. . +++++
T Consensus 23 ~~~i~~~~~~~------~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g----~--~~~~i 89 (407)
T 2dkj_A 23 REGLELIASEN------FV-SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG----A--AWANV 89 (407)
T ss_dssp HTSEECCTTCC------CC-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----C--SEEEC
T ss_pred hcceeeccCCC------CC-CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhC----C--CcceE
Confidence 46799998875 33 799999998887542224564322 4432 333 5556542 2 13445
Q ss_pred EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh---hhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCC
Q 015283 104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK---NIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPG 179 (410)
Q Consensus 104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~ 179 (410)
++ .+|++++..+...+ +.+||+|++++|+|+.+. ..++..|..+..+++. +++++.+|++.+++.+++ .
T Consensus 90 ~~---~sGt~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~ 162 (407)
T 2dkj_A 90 QP---HSGSQANMAVYMAL--MEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALE--H 162 (407)
T ss_dssp CC---SSHHHHHHHHHHHH--CCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHH--H
T ss_pred Ee---cchHHHHHHHHHHh--cCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhh--c
Confidence 44 45667888874433 679999999999999883 4555566654555542 224678999999999874 1
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC-CCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 180 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 180 ~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
+++++++++|+|| ... ++++|.++|++||+++|+||+|.. +.+.+... .. .. ..+++++|+||.+
T Consensus 163 ~~~~v~~~~p~~~--~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~--~~----~~--~~di~~~s~sK~l- 228 (407)
T 2dkj_A 163 RPKVIVAGASAYP--RFW---DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHP--NP----LP--YAHVVTSTTHKTL- 228 (407)
T ss_dssp CCSEEEECCSSCC--SCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSC--CC----TT--TCSEEEEESSGGG-
T ss_pred CCeEEEEeccccC--CCC---CHHHHHHHHHHcCCEEEEEccccccccccCccC--Cc----cc--cccEEEEeccccC-
Confidence 4455666899998 433 478888999999999999999886 43221110 00 11 2578899999954
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 338 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 338 (410)
+|+|+||+++ +++++++++....... ..++++.....++...+... ..+++++.+++++++++++.+.|
T Consensus 229 -~g~~~G~~~~--~~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L 297 (407)
T 2dkj_A 229 -RGPRGGLILS--NDPELGKRIDKLIFPG---IQGGPLEHVIAGKAVAFFEA-----LQPEFKEYSRLVVENAKRLAEEL 297 (407)
T ss_dssp -CCCSCEEEEE--SCHHHHHHHHHHHTTT---TCSSCCHHHHHHHHHHHHHH-----HSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCceEEEE--CCHHHHHHHHhhhccc---ccCCCcHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHH
Confidence 5889999854 3367666654432211 11223332222233333211 01345678888999999999999
Q ss_pred hhccCCCCCccccc-CCcceeeecCC-----CHHHHHHhhhcCcEEEcCC------------C--eEEecC-----CCcc
Q 015283 339 SAKDKSGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD------------G--RISLAG-----LSLA 393 (410)
Q Consensus 339 ~~~~g~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~------------g--Ris~~~-----~~~~ 393 (410)
+ +.| +.+.. +..++++|+.+ +.+.+.+.+.++||.+.++ + |++++. .+++
T Consensus 298 ~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~ 372 (407)
T 2dkj_A 298 A-RRG----YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPE 372 (407)
T ss_dssp H-HTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGG
T ss_pred H-hCC----ceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHH
Confidence 8 776 34443 34566777643 3444444445679998763 1 999863 5899
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
++++++++|++++++
T Consensus 373 ~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 373 EMPLVAELIDRALLE 387 (407)
T ss_dssp GHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998764
No 143
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.94 E-value=2.3e-25 Score=215.53 Aligned_cols=326 Identities=11% Similarity=0.094 Sum_probs=212.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC-C-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|......|+ .+|.+.+++.+.+.... . ..| +.....++++.+++++ + .+++++ ++||
T Consensus 76 ~~ylD~~sg~~~~~lgh--~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~v~~--~~sG 142 (439)
T 2oat_A 76 RKYFDFLSSYSAVNQGH--CHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF-N-------YHKVLP--MNTG 142 (439)
T ss_dssp CEEEESSGGGGTTTTCB--TCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH-T-------CSEEEE--ESSH
T ss_pred CEEEEccCCcccccCCC--CCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc-C-------CCEEEE--eCCH
Confidence 35678777754223333 36899999988875421 1 123 3445678888888885 2 368988 9999
Q ss_pred hhHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchhh-hhhhCC------------CCccceeeecCCCcccChhhH
Q 015283 112 TGSLRLAAALIERY-------FPG-AKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGM 170 (410)
Q Consensus 112 t~a~~~~~~~~~~~-------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~~~l 170 (410)
++|++.+.+++..+ .+| |+|++++|+|.++.. .+...| ..+..+|. .|++.+
T Consensus 143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 215 (439)
T 2oat_A 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL 215 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHH
Confidence 99999987665432 357 899999999976543 444334 23333433 388999
Q ss_pred HHHHhcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 171 IADIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 171 ~~~i~~~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
++.++. ++++++++.+.+|+||. +++.+++++|.++|++||+++|+||+|.+|+..+ ..+.+.. .+...+++
T Consensus 216 e~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g---~~~~~~~-~~~~~Di~- 288 (439)
T 2oat_A 216 ERALQD--PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG---RWLAVDY-ENVRPDIV- 288 (439)
T ss_dssp HHHTTS--TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGG-GTCCCSEE-
T ss_pred HHHhCC--CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC---cchhHHH-hCCCCcEE-
Confidence 998853 35677776655778896 5689999999999999999999999998776432 1111111 12223433
Q ss_pred EecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 250 ~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
|+||.++ +| +|+||+++ ++++++.+ .......+.+.+.+++.++...|+.. .+ ++..++++
T Consensus 289 --t~sK~l~-~G~~~~G~v~~---~~~~~~~l----~~~~~~~t~~~~~~~~aaa~aal~~~------~~--~~~~~~~~ 350 (439)
T 2oat_A 289 --LLGKALS-GGLYPVSAVLC---DDDIMLTI----KPGEHGSTYGGNPLGCRVAIAALEVL------EE--ENLAENAD 350 (439)
T ss_dssp --EECGGGG-TTSSCCEEEEE---CHHHHTTS----CTTSSCCSSTTCHHHHHHHHHHHHHH------HH--TTHHHHHH
T ss_pred --Eeccccc-CCCCCeEEEEE---CHHHHhcc----CCCCcccCCCcCHHHHHHHHHHHHHH------hh--hhHHHHHH
Confidence 8999999 68 99999855 66744433 22212222345556655554444321 11 24567788
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC------CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccHH
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCE 396 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~ 396 (410)
++++++.+.|+ +++.+. +... +..|.+.++.+ +. ++...+++ +||.+.|++ ||+++. .++++++
T Consensus 351 ~~~~~l~~~L~-~l~~~~-~~~~-~~~g~~~~v~l~~~~~~~~~~l~~~l~~-~Gv~v~~~~~~~iRi~~~~~~t~e~i~ 426 (439)
T 2oat_A 351 KLGIILRNELM-KLPSDV-VTAV-RGKGLLNAIVIKETKDWDAWKVCLRLRD-NGLLAKPTHGDIIRFAPPLVIKEDELR 426 (439)
T ss_dssp HHHHHHHHHHT-TSCTTT-EEEE-EEETTEEEEEECCCSSCCHHHHHHHHHH-TTEECCBSSSSEEEECCCTTCCHHHHH
T ss_pred HHHHHHHHHHH-HhcCCC-cEEE-EeeeeEEEEEEecCccHHHHHHHHHHHH-CCeEEecCCCCEEEEECccCCCHHHHH
Confidence 88899999998 775211 1112 23455555432 23 44566665 699999864 887652 4899999
Q ss_pred HHHHHHHHHhhh
Q 015283 397 YLADAIIDSYHN 408 (410)
Q Consensus 397 ~~~~~l~~~l~~ 408 (410)
+++++|++++++
T Consensus 427 ~~l~~l~~~l~~ 438 (439)
T 2oat_A 427 ESIEIINKTILS 438 (439)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 144
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.94 E-value=2.1e-26 Score=223.67 Aligned_cols=342 Identities=11% Similarity=0.024 Sum_probs=196.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|......|+. +|.+.+++.+++... ..|.+..+..+.++++++++....+. ..+++++ ++||++
T Consensus 44 ~~ylD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~--~~sGse 115 (448)
T 3dod_A 44 KEYYDGFSSVWLNVHGHR--KKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISPK--KLTRVFY--SDSGAE 115 (448)
T ss_dssp CEEEETTHHHHTCSSCBS--CHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSCT--TEEEEEE--ESSHHH
T ss_pred CEEEECCcchhhccCCCC--CHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCEEEE--eCchHH
Confidence 467899888654455654 699999998887553 22323334445555555555443321 2478999 999999
Q ss_pred HHHHHHHHHHHh---CC---CCEEEEcCCCCcchhhhhhhCCC-------------CccceeeecCCCcc----------
Q 015283 114 SLRLAAALIERY---FP---GAKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVG---------- 164 (410)
Q Consensus 114 a~~~~~~~~~~~---~~---gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~---------- 164 (410)
|++.+.+++... .. +|+|++.+|+|.++.......+. .+..++. .+.+.
T Consensus 116 A~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 193 (448)
T 3dod_A 116 AMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECR 193 (448)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhh
Confidence 999997766543 22 59999999999776543332221 1222332 12121
Q ss_pred -cChhhHHHHHhcCCCCcEEEEeCCCC-CCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh
Q 015283 165 -LDFEGMIADIKAAPGGSFILLHGCAH-NPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 241 (410)
Q Consensus 165 -~d~~~l~~~i~~~~~~~~~ii~~~p~-NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 241 (410)
.|++.+++.+...++++.++++.+++ |++|. +++.+.+++|.++|++||++||+||+|.+|+..+ ..+.... .
T Consensus 194 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~a~~~-~ 269 (448)
T 3dod_A 194 DQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTG---KMFACEH-E 269 (448)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGG-G
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCccc---chhhhhh-c
Confidence 24788888887322356666666666 88885 4577779999999999999999999999887432 1112111 1
Q ss_pred hcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHH---HHhhccCcccCCChhHHHHHHHHhCChhhHHHHH
Q 015283 242 TRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQ---LKRLARPMYSNPPVHGARIVANVVGNPALFDEWK 317 (410)
Q Consensus 242 ~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~ 317 (410)
+...++ .+|||.++ +| +|+||+++ ++++++.+... ........+.+.+.+++.++...|+..+
T Consensus 270 ~~~~di---~t~sK~l~-~G~~~ig~v~~---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~------ 336 (448)
T 3dod_A 270 NVQPDL---MAAGKGIT-GGYLPIAVTFA---TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFE------ 336 (448)
T ss_dssp TCCCSE---EEECGGGG-TTSSCCEEEEE---EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHH------
T ss_pred CCCCCE---EEeccccc-CCcCceEEEEE---CHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHh------
Confidence 222233 37899998 59 59999755 77744443210 0002222233456666666655554210
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh--ccCCCCCcccccCCcceeeecCC--C--------------HHHHHHhhhcCcEEE
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSA--KDKSGKDWSFILRQIGMFSFTGL--N--------------KAQSDNMTNKWHVYM 379 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~--~~g~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~ll~~~gi~v 379 (410)
+ +...++++++.+++.+.|.+ ..+. +.... ..|.+.|+.+ + .++...+++ .||.+
T Consensus 337 ~--~~~~~~~~~~~~~~~~~l~~l~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~ 409 (448)
T 3dod_A 337 S--ENIVEQVAEKSKKLHFLLQDLHALPH---VGDIR-QLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRE-LGMLT 409 (448)
T ss_dssp H--TTHHHHHHHHHHHHHHHHHHHTTSTT---EEEEE-EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTEEC
T ss_pred c--ccHHHHHHHHHHHHHHHHHHHhcCCC---eEEEE-eeeEEEEEEEccCcccccccchhhHHHHHHHHHHHH-CCcEE
Confidence 0 12233344444444444440 3321 12222 2344555432 1 345666766 59999
Q ss_pred cCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 380 TKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 380 ~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.|+| ||+.+ ..+++++++++++|+++++++
T Consensus 410 ~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 410 RPLGDVIAFLPPLASTAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp CEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eccCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9876 88543 248999999999999998653
No 145
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.94 E-value=5.7e-26 Score=219.73 Aligned_cols=330 Identities=13% Similarity=0.046 Sum_probs=206.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|..-...|+ .+|.+.+++.+.+.......| +.....++++.+++++. ..+++++ ++||++
T Consensus 56 ~~~lD~~~~~~~~~lG~--~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-------~~~~v~~--~~sgse 123 (434)
T 2epj_A 56 ARIVDLVLAYGPLILGH--KHPRVLEAVEEALARGWLYGA-PGEAEVLLAEKILGYVK-------RGGMIRF--VNSGTE 123 (434)
T ss_dssp CEEEESSGGGTTCTTCB--TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHHC-------TTCEEEE--ESSHHH
T ss_pred CEEEEcccchhcccCCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCCHHH
Confidence 45789988864223344 368999999888765322334 33445677777777752 1578999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-h-------------CCCC------ccceeeecCCCcccChhhHHHH
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D-------------ARVP------WSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~-------------~g~~------~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
|++.+.++.+.+.++++|++.+|+|.++..... . .|.. +..++. .|++.+++.
T Consensus 124 A~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 196 (434)
T 2epj_A 124 ATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence 999986654445677899999999987654221 1 1221 222222 378999988
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 174 IKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
+++.+++++++++++.+|+||.+. +.+.+++|.++|++||+++|+||+|.+|..+ ....... .+...++ .|
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g----~~~~~~~-~~~~~di---~s 268 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLG----LEGAQGY-FNIEGDI---IV 268 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSS----TTHHHHH-HTCCCSE---EE
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCC----cchhhHH-hCCCCCe---ee
Confidence 874223566666555567899866 6888999999999999999999999977422 1122212 2222333 48
Q ss_pred ccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 015283 253 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 332 (410)
Q Consensus 253 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (410)
+||.++. |+|+||+++ ++++++.+.... ......+.+.+.+++.++...|+.. .+ ++..++++++++
T Consensus 269 ~sK~l~~-G~~~G~v~~---~~~~~~~l~~~~-~~~~~~t~~~~~~~~aa~~a~l~~~------~~--~~~~~~~~~~~~ 335 (434)
T 2epj_A 269 LGKIIGG-GFPVGAVAG---SREVMSLLTPQG-KVFNAGTFNAHPITMAAGLATLKAL------EE--EPVYSVSREAAK 335 (434)
T ss_dssp EEGGGGT-TSSCEEEEE---CHHHHTTBTTTS-SBCCCCTTTTCHHHHHHHHHHHHHH------HH--SCHHHHHHHHHH
T ss_pred ecchhcC-Ccceeeeee---cHHHHHhhccCC-CcccCCCCCcCHHHHHHHHHHHHHH------Hh--cCHHHHHHHHHH
Confidence 9999995 999999855 677444332100 0001112234555555554444311 10 234456666666
Q ss_pred HHHHHhhhcc----CCCCCcccccCCcceeeecCCC------------------HHHHHHhhhcCcEEEcCCC--eEEec
Q 015283 333 KLFDSLSAKD----KSGKDWSFILRQIGMFSFTGLN------------------KAQSDNMTNKWHVYMTKDG--RISLA 388 (410)
Q Consensus 333 ~l~~~l~~~~----g~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ll~~~gi~v~~~g--Ris~~ 388 (410)
++.+.|+ ++ +. ....+..|.|+|+.+. .++...+++ +||.+.|++ |+.++
T Consensus 336 ~l~~~L~-~~~~~~~~----~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~~~ 409 (434)
T 2epj_A 336 ALEEAAS-EVLDRTGL----PYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLR-RGVFIAPSNLEAVFTG 409 (434)
T ss_dssp HHHHHHH-HHHHHHTC----CEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTTSCEECC
T ss_pred HHHHHHH-HHHhhCCC----cEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHH-CCeEEeccCCCcEEEe
Confidence 6666665 54 42 2112233455554321 124556655 699999986 55433
Q ss_pred -CCCcccHHHHHHHHHHHhhhc
Q 015283 389 -GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 389 -~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..+++++++++++|+++++++
T Consensus 410 ~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 410 LPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHH
Confidence 248999999999999988653
No 146
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.94 E-value=9.6e-26 Score=215.72 Aligned_cols=316 Identities=16% Similarity=0.097 Sum_probs=213.7
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhH
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 114 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a 114 (410)
+.+||+.|.+ +. ++.+.+++.+.+.. ..|.+..+..++++++++++.. +++++ +++|+++
T Consensus 31 ~~id~~~~~~------~~-~~~v~~a~~~~~~~---~~y~~~~~~~~l~~~la~~~~~--------~~~v~--~~~Gt~a 90 (399)
T 2oga_A 31 PFLDLKAAYE------EL-RAETDAAIARVLDS---GRYLLGPELEGFEAEFAAYCET--------DHAVG--VNSGMDA 90 (399)
T ss_dssp CSCCHHHHHH------HT-HHHHHHHHHHHHHH---TCCSSSHHHHHHHHHHHHHTTS--------SEEEE--ESCHHHH
T ss_pred cccccCcCCC------CC-CHHHHHHHHHHHhc---CCCCCchhHHHHHHHHHHHHCC--------CeEEE--ecCHHHH
Confidence 6789998876 22 48888888887754 2466667889999999999632 24556 7888999
Q ss_pred HHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 115 LRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 115 ~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
+..+ +... +.+||+|++++|+|..+...++..|.+++.+++. ++++.+|++.+++.+++ ++++++ |+|||
T Consensus 91 ~~~~--l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~n~t 161 (399)
T 2oga_A 91 LQLA--LRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPH-EDHPTLDPLLVEKAITP---RTRALL---PVHLY 161 (399)
T ss_dssp HHHH--HHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-SSSSSBCHHHHHHHCCT---TEEEEC---CBCGG
T ss_pred HHHH--HHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecC-CCCCCcCHHHHHHhcCC---CCeEEE---EeCCc
Confidence 9887 3333 5699999999999999999999999999999874 33578999999999875 566666 67999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEe
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVC 271 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~ 271 (410)
|.+.+ +++|.++|+++|+++|+|++|..+... +...+ ... .++++.|+ ||.++.+| |.||+ ++
T Consensus 162 G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~--~~~~~------~~~-~di~~~S~~~sK~~~~~G-~~g~~--~~ 226 (399)
T 2oga_A 162 GHPAD---MDALRELADRHGLHIVEDAAQAHGARY--RGRRI------GAG-SSVAAFSFYPGKNLGCFG-DGGAV--VT 226 (399)
T ss_dssp GCCCC---HHHHHHHHHHHTCEECEECTTCTTCEE--TTEET------TCT-TCEEEEECCTTSSSCCSS-CCEEE--EE
T ss_pred CCccC---HHHHHHHHHHcCCEEEEECcccccCcc--CCeec------ccc-cCEEEEeCCCCccCCcCC-ceEEE--Ee
Confidence 99765 678888899999999999998755321 11111 111 25788888 79999879 89997 44
Q ss_pred CCchhHHHHHHHHHhhcc--------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 272 SSSDLAARVKSQLKRLAR--------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.++++++++......... ......+.+.+.++...++. +++..++.+++++++.+.|. ++.
T Consensus 227 ~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----------~~~~~~~~~~~~~~l~~~L~-~~~ 295 (399)
T 2oga_A 227 GDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH----------LDSWNGRRSALAAEYLSGLA-GLP 295 (399)
T ss_dssp SCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT----------HHHHHHHHHHHHHHHHHHTT-TCT
T ss_pred CCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHhc-cCC
Confidence 557766665543221100 00012334444443333322 23344555667778888887 662
Q ss_pred CCCCcccc-cCCcceeeec-----CCCHHH-HHHhhhcCcEEEcCC-----------------------------C--eE
Q 015283 344 SGKDWSFI-LRQIGMFSFT-----GLNKAQ-SDNMTNKWHVYMTKD-----------------------------G--RI 385 (410)
Q Consensus 344 ~~~~~~~~-~~~~~~~~~~-----~~~~~~-~~~ll~~~gi~v~~~-----------------------------g--Ri 385 (410)
. +.+. .+..+.++|. ..+.+. ...|. ++||.+.++ + ||
T Consensus 296 g---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi 371 (399)
T 2oga_A 296 G---IGLPVTAPDTDPVWHLFTVRTERRDELRSHLD-ARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSL 371 (399)
T ss_dssp T---CBCCCCCTTEECCCSSEEEECSSHHHHHHHHH-HTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEE
T ss_pred C---ccccCCCCCCcceeEEEEEECCCHHHHHHHHH-HCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEc
Confidence 1 2332 2333444442 124444 45554 469988642 2 77
Q ss_pred EecC-CCcccHHHHHHHHHHHhhhc
Q 015283 386 SLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 386 s~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
++.. .++++++++++.|+++++++
T Consensus 372 ~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 372 PIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp CCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7643 48999999999999998764
No 147
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.94 E-value=1.3e-25 Score=219.15 Aligned_cols=346 Identities=9% Similarity=0.030 Sum_probs=216.7
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|......|+. +|.+.+++.+++.... +.+ +..+..+.++++++++.+..+. ..+++++ ++||++
T Consensus 54 ~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~~-~~~-~~~~~~~~~~~la~~l~~~~~~--~~~~v~~--~~sGse 125 (476)
T 3i5t_A 54 RRLIDGPAGMWCAQVGYG--RREIVDAMAHQAMVLP-YAS-PWYMATSPAARLAEKIATLTPG--DLNRIFF--TTGGST 125 (476)
T ss_dssp CEEEETTHHHHTCTTCBC--CHHHHHHHHHHHHHCC-CCC-TTTCBCHHHHHHHHHHHTTSST--TCCEEEE--ESSHHH
T ss_pred CEEEECCCchhhccCCCC--CHHHHHHHHHHHHhcc-Ccc-cCccCCHHHHHHHHHHHhcCCC--CcCEEEE--eCchHH
Confidence 467899888653455654 6899999988875521 112 2245567778888887665532 3568999 999999
Q ss_pred HHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCCCCcc-------------ceeeecC-CCcccC-------
Q 015283 114 SLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARVPWS-------------EYRYYDP-KTVGLD------- 166 (410)
Q Consensus 114 a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~~-~~~~~d------- 166 (410)
|++.+++++... ..++.|++.+|+|.++.......+.... .++.... ..+..|
T Consensus 126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (476)
T 3i5t_A 126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDD 205 (476)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHH
Confidence 999997777554 4568999999999887654443332211 1211000 001112
Q ss_pred -hhhHHHHHhcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhc
Q 015283 167 -FEGMIADIKAAP-GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 243 (410)
Q Consensus 167 -~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 243 (410)
++++++.+.+.. +++.++++.+++|++|. +++.+.+++|.++|++||+++|+||+|.+|+..+ ..+......+.
T Consensus 206 ~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G---~~~~~~~~~~v 282 (476)
T 3i5t_A 206 LVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCG---EWFASEKVFGV 282 (476)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSCHHHHTTCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---CceeeecccCC
Confidence 678888886422 35677777888888886 7788889999999999999999999999987432 22232211222
Q ss_pred CCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHH---HhhccCcccCCChhHHHHHHHHhCChhhHHHHHHH
Q 015283 244 GMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KRLARPMYSNPPVHGARIVANVVGNPALFDEWKAE 319 (410)
Q Consensus 244 ~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 319 (410)
.++++ ++||.++ .| +|+|++++ ++++++.+.... .......+.+.+.+++.++...|+.. .+
T Consensus 283 ~pdi~---t~sK~l~-~G~~plg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~------~~- 348 (476)
T 3i5t_A 283 VPDII---TFAKGVT-SGYVPLGGLAI---SEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELM------ER- 348 (476)
T ss_dssp CCSEE---EECGGGG-TTSSCCEEEEE---CHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHH------HH-
T ss_pred Ccchh---hhhhhhc-CCCcCeEEEEE---CHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHH------Hh-
Confidence 23443 6899998 58 99999755 777544432210 00011123345566666665554421 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C-------------H-HHHHHhhhcCcEEEcCCC
Q 015283 320 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-------------K-AQSDNMTNKWHVYMTKDG 383 (410)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-------------~-~~~~~ll~~~gi~v~~~g 383 (410)
+...++++++.+++.+.|+ +++....+....+.+ .|.++.+ + . .+...+++ .||.+.|.|
T Consensus 349 -~~~~~~~~~~~~~l~~~L~-~l~~~~~v~~v~~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~g 424 (476)
T 3i5t_A 349 -EGIVDQAREMADYFAAALA-SLRDLPGVAETRSVG-LVGCVQCLLDPTRADGTAEDKAFTLKIDERCFE-LGLIVRPLG 424 (476)
T ss_dssp -TTHHHHHHHHHHHHHHHHH-TTTTSTTEEEEEEET-TEEEEEECCC-----CCHHHHHHHHHHHHHHHH-TTEECEEET
T ss_pred -HHHHHHHHHHHHHHHHHHH-HHhcCCCeEEEEecC-ceeEEEEecCccccccccchhHHHHHHHHHHHH-CCCEEEecC
Confidence 2445666777777777776 553101122333443 3433321 1 1 23456665 599999866
Q ss_pred ---eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283 384 ---RISLA-GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 384 ---Ris~~-~~~~~~i~~~~~~l~~~l~~ 408 (410)
||+.+ ..+++++++++++|++++++
T Consensus 425 ~~iRi~p~l~~t~e~i~~~l~~l~~~l~~ 453 (476)
T 3i5t_A 425 DLCVISPPLIISRAQIDEMVAIMRQAITE 453 (476)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 88843 24999999999999999865
No 148
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.94 E-value=1.4e-25 Score=213.66 Aligned_cols=307 Identities=14% Similarity=0.060 Sum_probs=205.3
Q ss_pred ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCC
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA 129 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd 129 (410)
|.+.+.+.+++.+.+..+. ..|.+..+..++|+++++++.. ++.|++ + +||+++.++. ... +.+||
T Consensus 13 p~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~~~-------~~~i~~--~-sGt~al~~~l--~~l~~~~gd 79 (388)
T 1b9h_A 13 PQYDDAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHHGA-------AHALAV--T-NGTHALELAL--QVMGVGPGT 79 (388)
T ss_dssp SCCCHHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHTTC-------SEEEEE--S-CHHHHHHHHH--HHTTCCTTC
T ss_pred CCCCHHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHhCC-------CeEEEe--C-CHHHHHHHHH--HHcCCCCcC
Confidence 3345899999988876543 4566778899999999999633 245665 4 5589999873 333 56999
Q ss_pred EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 209 (410)
Q Consensus 130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~ 209 (410)
+|+++.|+|..+...++..|++++.+++. .+++.+|++.+++.+++ ++++++ |+||||.+. ++++|.++|
T Consensus 80 ~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~n~tG~~~---~l~~i~~la 149 (388)
T 1b9h_A 80 EVIVPAFTFISSSQAAQRLGAVTVPVDVD-AATYNLDPEAVAAAVTP---RTKVIM---PVHMAGLMA---DMDALAKIS 149 (388)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCCBCHHHHHHHCCT---TEEEEC---CBCGGGCCC---CHHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcCc---CceEEE---EeCCccCcC---CHHHHHHHH
Confidence 99999999999999999999999999884 34578999999999864 566665 899999975 467788889
Q ss_pred HHcCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh--HHHHHHHHHh
Q 015283 210 QEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL--AARVKSQLKR 286 (410)
Q Consensus 210 ~~~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~--~~~~~~~~~~ 286 (410)
++||+++|+|++|..+. +.+ . .+ ... .++.+.||||..+++|.|+||++ ++++++ ++++... ..
T Consensus 150 ~~~~~~li~D~a~~~g~~~~~--~---~~----~~~-~~i~~~S~s~~K~l~g~~~G~~~--~~~~~~~~~~~~~~~-~~ 216 (388)
T 1b9h_A 150 ADTGVPLLQDAAHAHGARWQG--K---RV----GEL-DSIATFSFQNGKLMTAGEGGAVV--FPDGETEKYETAFLR-HS 216 (388)
T ss_dssp HHHTCCBCEECTTCTTCEETT--E---EG----GGS-SSCEEEECCTTSSSCSSSCEEEE--ECTTCHHHHHHHHHH-TB
T ss_pred HHcCCEEEEecchhcCCccCC--e---ec----ccc-cceEEEEccCCCcccCCCeEEEE--ECCHHHHHHHHHHHH-Hh
Confidence 99999999999987533 211 1 11 111 26788899977777778999974 344444 4444321 11
Q ss_pred hcc---------C--ccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc--
Q 015283 287 LAR---------P--MYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-- 352 (410)
Q Consensus 287 ~~~---------~--~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-- 352 (410)
... . .+. ..+.....++...+ +++++.+++++++++++.+.|+ +++. +.+..
T Consensus 217 ~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~----------~~l~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~~ 282 (388)
T 1b9h_A 217 CGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQL----------ARLDEQIAVRDERWTLLSRLLG-AIDG---VVPQGGD 282 (388)
T ss_dssp TTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHH----------TTHHHHHHHHHHHHHHHHHHHH-TSTT---CEECCCC
T ss_pred CCCCccCccceeecccccCCcCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHhc-cCCC---ccccCCC
Confidence 100 0 011 12222222222221 2234566777888999999998 7621 33332
Q ss_pred ----CCcceeeecCCC------HH-HHHHhhhcCcEEEcCC---------------------------C----------e
Q 015283 353 ----RQIGMFSFTGLN------KA-QSDNMTNKWHVYMTKD---------------------------G----------R 384 (410)
Q Consensus 353 ----~~~~~~~~~~~~------~~-~~~~ll~~~gi~v~~~---------------------------g----------R 384 (410)
+.+++++|+.+. .+ +...|.+ +||.+.++ + |
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 361 (388)
T 1b9h_A 283 VRADRNSHYMAMFRIPGLTEERRNALVDRLVE-AGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVW 361 (388)
T ss_dssp TTCCBCCCSEEEEECTTCCHHHHHHHHHHHHH-TTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEE
T ss_pred cCCCccceEEEEEEeCCcCcccHHHHHHHHHH-CCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEE
Confidence 344667776442 22 3455554 69988542 0 5
Q ss_pred EEec-CC-CcccHHHHHHHHHHHhhh
Q 015283 385 ISLA-GL-SLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 385 is~~-~~-~~~~i~~~~~~l~~~l~~ 408 (410)
|++. .+ |++|++++++.|++++++
T Consensus 362 l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 362 LHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp EEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 5544 36 789999999999998865
No 149
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.94 E-value=7.4e-26 Score=219.83 Aligned_cols=343 Identities=12% Similarity=0.029 Sum_probs=215.2
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCc-cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~-~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
..||+..|......|+. +|.+.+++.+++... +.. .+.+.....++++.+++++.. ..+++++ ++||+
T Consensus 76 ~ylD~~s~~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~------~~~~v~~--~~sGs 145 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHG--HPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPA------GLDTVFF--SDSGS 145 (457)
T ss_dssp EEEETTHHHHTCTTCBT--CHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSST------TEEEEEE--ESSHH
T ss_pred EEEECCCcHhhhccCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCC------CcCEEEE--eCcHH
Confidence 67888887543355553 689999988877542 111 222344556777777777421 2468999 99999
Q ss_pred hHHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCC--------------CCccceeeecCCCcccChhhHHH
Q 015283 113 GSLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDAR--------------VPWSEYRYYDPKTVGLDFEGMIA 172 (410)
Q Consensus 113 ~a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g--------------~~~~~v~~~~~~~~~~d~~~l~~ 172 (410)
+|++.+++++..+ ..++.|++.+++|.++.......+ ..+..++.........|++.+++
T Consensus 146 eA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~ 225 (457)
T 3tfu_A 146 VSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEA 225 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHH
Confidence 9999987666543 234589999999977654333321 12233333111112247889998
Q ss_pred HHhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEE
Q 015283 173 DIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 250 (410)
Q Consensus 173 ~i~~~~~~~~~ii~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (410)
.+++.+++++++++.+ ++||+|.+. +.+.+++|.++|++||+++|+||+|.+|+..+ ..+.... .+..++++
T Consensus 226 ~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G---~~~a~~~-~~~~pdii-- 299 (457)
T 3tfu_A 226 QLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTG---ALFAADH-AGVSPDIM-- 299 (457)
T ss_dssp HHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHH-HTCCCSEE--
T ss_pred HHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCcccc---chhHhHh-cCCCceEE--
Confidence 8874334677777777 899999876 67779999999999999999999999987432 1222222 22333444
Q ss_pred ecccccccccC-CCcceEEEEeCCchhHHHHHHHHHh-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 251 QSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 251 ~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
||||.++ +| +|+||+++ ++++++.+...-.. .....+.+.+.+++.++...|+.. .+ +...++++
T Consensus 300 -t~sK~l~-gG~~~lG~v~~---~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~------~~--~~~~~~~~ 366 (457)
T 3tfu_A 300 -CVGKALT-GGYLSLAATLC---TADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELL------LG--QDWRTRIT 366 (457)
T ss_dssp -EECGGGG-TTSSCCEEEEE---EHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHH------HT--SCHHHHHH
T ss_pred -EEChhhh-CCCcceEEEEE---cHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHH------hh--hHHHHHHH
Confidence 8999987 45 79999855 77755554321011 111122345566666654444311 00 13455666
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC----C-HHHHHHhhhcCcEEEcCCC---eEEecC-CCcccHHHHH
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG---RISLAG-LSLAKCEYLA 399 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~ll~~~gi~v~~~g---Ris~~~-~~~~~i~~~~ 399 (410)
++.+++.+.|+ ++.....+....+. |.|.++.+ + .++...+++ +||.+.|.+ ||+.+. .+++++++++
T Consensus 367 ~~~~~l~~~L~-~l~~~~~v~~vr~~-G~~~~i~l~~~~~~~~~~~~l~~-~Gv~v~~~~~~lRi~p~~~~t~eei~~~l 443 (457)
T 3tfu_A 367 ELAAGLTAGLD-TARALPAVTDVRVC-GAIGVIECDRPVDLAVATPAALD-RGVWLRPFRNLVYAMPPYICTPAEITQIT 443 (457)
T ss_dssp HHHHHHHHHHG-GGGGSTTEEEEEEC-SSCEEEEESSCCCHHHHHHHHHH-TTEECCCBTTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHH-HHhcCCCeeeeecC-CeEEEEEECCcccHHHHHHHHHH-CCeEEEecCCEEEEECCCCCCHHHHHHHH
Confidence 67777777777 65310112223333 45555433 2 345667766 599999976 887543 4899999999
Q ss_pred HHHHHHhhhc
Q 015283 400 DAIIDSYHNV 409 (410)
Q Consensus 400 ~~l~~~l~~~ 409 (410)
++|+++++++
T Consensus 444 ~~L~~~l~~~ 453 (457)
T 3tfu_A 444 SAMVEVARLV 453 (457)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 150
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.94 E-value=7.8e-26 Score=218.43 Aligned_cols=336 Identities=12% Similarity=0.020 Sum_probs=197.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|......|+. +|.+.+++.+.+.......| +.....++++.+++++. . .+++++ ++||++
T Consensus 53 ~~ylD~~~~~~~~~lG~~--~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~-~------~~~v~~--~~sGse 120 (429)
T 4e77_A 53 KAYIDYVGSWGPMILGHN--HPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLVP-T------MDMVRM--VNSGTE 120 (429)
T ss_dssp CEEEESSGGGTTCTTCBT--CHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHST-T------CSEEEE--ESSHHH
T ss_pred CEEEECCCchhccccCCC--CHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhCC-C------CCEEEE--eCcHHH
Confidence 467899888753445553 69999999888765432334 55566678888887753 1 578999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hCCCC--------ccceeee-cCC---CcccChhhHHHHHhcCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVP--------WSEYRYY-DPK---TVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~--------~~~v~~~-~~~---~~~~d~~~l~~~i~~~~~~ 180 (410)
+++.+.++...+.+++.|++.+++|.++..... ..+.. ...++.. ... -.-.|++.+++.+++.+++
T Consensus 121 a~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (429)
T 4e77_A 121 ATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQE 200 (429)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCC
Confidence 999997766555577899999999877654211 11100 0000000 000 0012789999999864445
Q ss_pred cEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc
Q 015283 181 SFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 258 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~--~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 258 (410)
+++++ ++|+|++|.++. .+.+++|.++|++||+++|+||+|.+|..+ . ...... ....+++ .|+||.++
T Consensus 201 ~~~vi-~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g---~-~~~~~~-~~~~pdi---~t~sK~~~ 271 (429)
T 4e77_A 201 VACII-VEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA---L-AGAQDY-YHVIPDL---TCLGKIIG 271 (429)
T ss_dssp EEEEE-ECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTB---T-TCHHHH-TTCCCSE---EEEEGGGG
T ss_pred EEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccC---c-chHHHh-cCCCCCe---eeeccccc
Confidence 56555 566666544333 444999999999999999999999988321 1 112212 2222233 48999999
Q ss_pred ccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 259 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLF 335 (410)
Q Consensus 259 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (410)
+|+|+||+++ ++++++.+......... .+.+.+.+++.++...|+ +.++ .++.++..+..++.|.
T Consensus 272 -~G~~~G~~~~---~~~~~~~l~~~~~~~~~-~t~~~~~~~~aaa~aal~~~~~~~~-------~~~~~~~~~~l~~~L~ 339 (429)
T 4e77_A 272 -GGMPVGAFGG---RREVMNALAPTGPVYQA-GTLSGNPIAMAAGFACLTEISQVGV-------YETLTELTDSLATGLR 339 (429)
T ss_dssp -TTSCCEEEEE---CHHHHTTBTTTSSBCC---CCCCCHHHHHHHHHHHHHHTSTTH-------HHHHHHHHHHHHHHHH
T ss_pred -CCCCeEEEEE---CHHHHHHhccCCCcccc-CCCCCCHHHHHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHH
Confidence 7999999755 77754443221000111 122455555555544443 3222 1222222222333333
Q ss_pred HHhhhccCCCCCcccccCCcceeeecCC--C-----------------HHHHHHhhhcCcEEEcCCC--eEEecC-CCcc
Q 015283 336 DSLSAKDKSGKDWSFILRQIGMFSFTGL--N-----------------KAQSDNMTNKWHVYMTKDG--RISLAG-LSLA 393 (410)
Q Consensus 336 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~ll~~~gi~v~~~g--Ris~~~-~~~~ 393 (410)
+.+. +.+. ....+..|.|.++.+ . .++...+++ +||.+.+++ |+.+.. .+++
T Consensus 340 ~~~~-~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~t~e 413 (429)
T 4e77_A 340 HAAK-EENI----PLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLE-EGVYLAPSAFEAGFMSLAHSNE 413 (429)
T ss_dssp HHHH-HTTC----CCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHH-TTEECCSSTTSCEECCTTCCHH
T ss_pred HHHH-hCCC----ceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHH-CCeEEeecCCCCEEEeccCCHH
Confidence 3333 3342 222333455555433 1 344566666 599999986 554432 4999
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
++++++++|++++++
T Consensus 414 ~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 414 DIQKTVNAARRCFAK 428 (429)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 151
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.94 E-value=1.2e-25 Score=217.19 Aligned_cols=327 Identities=11% Similarity=0.099 Sum_probs=203.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCC--ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...+|+..|......|+ .+|.+.+++.+++..... ..| +.....++++.+++++ + .+++++ ++||
T Consensus 65 ~~ylD~~~g~~~~~lgh--~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~sG 131 (433)
T 1z7d_A 65 KRYYDFLSAYSSVNQGH--CHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL----G----YDKVLM--MNTG 131 (433)
T ss_dssp CEEEESSHHHHTTTTCB--TCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH----T----CSEEEE--ESSH
T ss_pred CEEEEcccchhhcccCC--CCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc----C----CCeEEE--eCCH
Confidence 35678887754223333 368999999888754211 123 3344567888888875 2 468988 9999
Q ss_pred hhHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchhh-hhhhCC------------CCccceeeecCCCcccChhhH
Q 015283 112 TGSLRLAAALIERY-------FPG-AKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGM 170 (410)
Q Consensus 112 t~a~~~~~~~~~~~-------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~~~l 170 (410)
++|++.+.+++..+ .+| |+|++++|+|.++.. .+...| ..+..+|. .|++.+
T Consensus 132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 204 (433)
T 1z7d_A 132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL 204 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence 99999987665432 367 999999999987643 333333 12333332 388999
Q ss_pred HHHHhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEE
Q 015283 171 IADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 249 (410)
Q Consensus 171 ~~~i~~~~~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (410)
++.++. ++++++++++.+|+||.+ ++.+++++|.++|++||+++|+||+|.+|+..+ ..+.... .+...+++
T Consensus 205 e~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g---~~~~~~~-~~~~~di~- 277 (433)
T 1z7d_A 205 EEELKD--PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTG---KLLCVHH-YNVKPDVI- 277 (433)
T ss_dssp HHHHTS--TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGG-GTCCCSEE-
T ss_pred HHHhCC--CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCC---cchhhHh-cCCCCCEE-
Confidence 999852 356777766567789975 688899999999999999999999998776432 1111111 12223433
Q ss_pred EecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 015283 250 AQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 328 (410)
Q Consensus 250 ~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (410)
|+||.++ +| +|+||+++ ++++++.+ .......+.+.+.+++.++...|+.. .+ ++..++++
T Consensus 278 --t~sK~l~-~G~~~~G~v~~---~~~~~~~l----~~~~~~~t~~~~~~~~aaa~aal~~~------~~--~~~~~~~~ 339 (433)
T 1z7d_A 278 --LLGKALS-GGHYPISAVLA---NDDIMLVI----KPGEHGSTYGGNPLAASICVEALNVL------IN--EKLCENAE 339 (433)
T ss_dssp --EECGGGG-TTSSCCEEEEE---CHHHHTTC----CTTCCCCTTTTCHHHHHHHHHHHHHH------HH--TTHHHHHH
T ss_pred --EECcccc-CCCCCeEEEEE---CHHHHhhh----ccccccccCCCCHHHHHHHHHHHHHH------Hh--ccHHHHHH
Confidence 8999999 79 99999855 66744433 22212222345556655554444321 11 13456667
Q ss_pred HHHHHHHHHhhhcc--CCCCCcccccCCcceeeecCC-----CH-HHHHHhhhcCcEEEcCCC----eEEecC-CCcccH
Q 015283 329 NVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKC 395 (410)
Q Consensus 329 ~~~~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i 395 (410)
++++++.+.|+ ++ +.+. +.... ..|.++|+.+ +. ++...+++ +||.+.|++ ||+++. .+++++
T Consensus 340 ~~~~~l~~~L~-~l~~~~~~-~~~~~-~~g~~~~i~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~iRi~~~~~~t~e~i 415 (433)
T 1z7d_A 340 KLGGPFLENLK-RELKDSKI-VRDVR-GKGLLCAIEFKNELVNVLDICLKLKE-NGLITRDVHDKTIRLTPPLCITKEQL 415 (433)
T ss_dssp HHHHHHHHHHH-HHHTTCTT-EEEEE-EETTEEEEEECTTTCCHHHHHHHHHH-TTEECCEETTTEEEECCCTTCCHHHH
T ss_pred HHHHHHHHHHH-HHHHhCCC-eEEEE-eeeeEEEEEEccChhHHHHHHHHHHH-CCeEEecCCCCEEEEECCcCCCHHHH
Confidence 77777777777 65 3211 11222 3455555533 23 34566665 699999853 887653 489999
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
++++++|+++++++
T Consensus 416 ~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 416 DECTEIIVKTVKFF 429 (433)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988653
No 152
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.94 E-value=6.2e-26 Score=220.66 Aligned_cols=330 Identities=13% Similarity=0.005 Sum_probs=196.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||++.|......|+ .+|.+.+++.+.+.... .| .+..++++++++++....+ ..+++++ ++||++
T Consensus 57 ~~~iD~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~---~~~~v~~--~~gg~e 124 (453)
T 2cy8_A 57 NVYLDFFGGHGALVLGH--GHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP---SIRKLRF--TGSGTE 124 (453)
T ss_dssp CEEEESCTTTTSCTTCB--TCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT---TCSEEEE--ESCHHH
T ss_pred CEEEECcccHhhcccCC--CCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEE--eCCHHH
Confidence 45789988864223344 36899999988875532 23 2355788888888765542 3678999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-----------CCCCc----cceeeecCCCcccChhhHHHHHhcCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-----------ARVPW----SEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-----------~g~~~----~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
|++.+.++.+.+.++++|++.+|+|.++...... .|... ..+.. + + .|++.+++.+++.+
T Consensus 125 A~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~---~-~d~~~le~~l~~~~ 199 (453)
T 2cy8_A 125 TTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI-R---P-DDIEGMREVFANHG 199 (453)
T ss_dssp HHHHHHHHHHHHHCCCEEEEECC----------------------------CGGGEEEE-C---T-TCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec-C---C-CCHHHHHHHHHhcC
Confidence 9999866544355668999999999876543321 12211 01111 1 1 38899998887422
Q ss_pred CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++++++++++.+||||.+ .+.+++++|.++|++||++||+||+|.++..+ ....... .+...++ .|+||.+
T Consensus 200 ~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g----~~~~~~~-~~~~~di---~s~sK~l 271 (453)
T 2cy8_A 200 SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVG----NHGMQAL-LDVQPDL---TCLAKAS 271 (453)
T ss_dssp GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTC----TTHHHHH-HTCCCSE---EEEEGGG
T ss_pred CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccC----chhhhHH-hCCCCcE---EEEChhh
Confidence 356666655556779976 47899999999999999999999999977321 1222212 2222333 3899999
Q ss_pred cccCCCcceEEEEeCCchhHHHHHHH--HHhhccCcccCCChhHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSSDLAARVKSQ--LKRLARPMYSNPPVHGARIVANVVGN-PALFDEWKAEMEMMAGRIKNVRQKL 334 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~l 334 (410)
+ +|+|+||+++ ++++++.+... ...... .+.+++.+++.++...|+. . . ++..++++++++++
T Consensus 272 ~-~G~~~G~v~~---~~~~~~~l~~~~~~~~~~~-~t~~~n~~~~aa~~aal~~~~--~-------~~~~~~~~~~~~~l 337 (453)
T 2cy8_A 272 A-GGLPGGILGG---REDVMGVLSRGSDRKVLHQ-GTFTGNPITAAAAIAAIDTIL--E-------DDVCAKINDLGQFA 337 (453)
T ss_dssp G-TTSSCEEEEE---CHHHHTTSSSCC----------CCCCHHHHHHHHHHHHHHH--H-------TTHHHHHHHHHHHH
T ss_pred h-CCcceEEEec---hHHHHHHhccccCCCceeC-CCCCCCHHHHHHHHHHHHHHh--h-------hhHHHHHHHHHHHH
Confidence 9 5999999855 67755443220 000111 1224555555555444432 1 0 13344555566666
Q ss_pred HHHhhhcc----CCCCCcccccCCcceeeecCCC------------------------HHHHHHhhhcCcEEEcCCCeEE
Q 015283 335 FDSLSAKD----KSGKDWSFILRQIGMFSFTGLN------------------------KAQSDNMTNKWHVYMTKDGRIS 386 (410)
Q Consensus 335 ~~~l~~~~----g~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~ll~~~gi~v~~~gRis 386 (410)
.+.|+ ++ +. .....+ .|.|+|+.+. .++...+++ +||.+.|++|+.
T Consensus 338 ~~~L~-~~~~~~~~---~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gv~v~~~~~~~ 411 (453)
T 2cy8_A 338 REAMN-HLFARKGL---NWLAYG-RFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALIL-EGVDIGGRGSVF 411 (453)
T ss_dssp HHHHH-HHHHHTTC---CEEEEC-CTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHH-TTEECBTTTEEE
T ss_pred HHHHH-HHHhhCCC---cEEEEE-eeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHH-CCeEEeCCCCEE
Confidence 66665 43 32 112333 3456555321 234556665 699998877443
Q ss_pred ec-CCCcccHHHHHHHHHHHhhh
Q 015283 387 LA-GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 387 ~~-~~~~~~i~~~~~~l~~~l~~ 408 (410)
++ ..+++++++++++|++++.+
T Consensus 412 l~~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 412 LSAQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eeccCCHHHHHHHHHHHHHHHHH
Confidence 32 24899999999999998765
No 153
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.94 E-value=7.4e-25 Score=211.26 Aligned_cols=317 Identities=15% Similarity=0.031 Sum_probs=212.8
Q ss_pred eeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283 38 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 116 (410)
Q Consensus 38 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~ 116 (410)
+|+.|.| ..+. |+.+.+++.+.+..+ .|++ ..+..++|+++++++.. +++++ ++||++++.
T Consensus 20 ~l~~~~p----~~~~-p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~ 81 (424)
T 2po3_A 20 PLLVGRP----NRID-RARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAGV--------RHAVA--TCNATAGLQ 81 (424)
T ss_dssp CEETTCC----CCCC-HHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHTS--------SEEEE--ESCHHHHHH
T ss_pred cccccCC----CCCC-hHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHH
Confidence 6888877 3333 678888888877543 4766 68899999999999732 47888 999999999
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC
Q 015283 117 LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 196 (410)
Q Consensus 117 ~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~ 196 (410)
++... +.+||+|++++|+|..+...+...|++++.+++. .+++.+|++++++.+++ ++++++++ ||||..
T Consensus 82 ~~l~~---l~~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~---~~~~v~~~---~~tG~~ 151 (424)
T 2po3_A 82 LLAHA---AGLTGEVIMPSMTFAATPHALRWIGLTPVFADID-PDTGNLDPDQVAAAVTP---RTSAVVGV---HLWGRP 151 (424)
T ss_dssp HHHHH---HTCCSEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTSSBCHHHHGGGCCT---TEEEEEEE---CGGGCC
T ss_pred HHHHH---cCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhhCc---CCcEEEEE---CCCCCc
Confidence 98433 3478999999999999999999999999999884 34678899999988864 56666643 589984
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 275 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~ 275 (410)
.++++|+++|+++|+++|+|++|. ++.+.+ . .+ ....+ +++.||||..+++|+|+||++ +++++
T Consensus 152 ---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~---~--~~----~~~~d-i~~~S~sk~K~l~~~~~G~~v--~~~~~ 216 (424)
T 2po3_A 152 ---CAADQLRKVADEHGLRLYFDAAHALGCAVDG---R--PA----GSLGD-AEVFSFHATKAVNAFEGGAVV--TDDAD 216 (424)
T ss_dssp ---CCHHHHHHHHHHTTCEEEEECTTCTTCEETT---E--ET----TSSSS-EEEEECCTTSSSCCSSCEEEE--ESCHH
T ss_pred ---CCHHHHHHHHHHcCCEEEEECccccCCeECC---e--ec----ccccC-EEEEeCCCCCCccCCCCeEEE--eCCHH
Confidence 578888888999999999999988 455321 1 11 11123 889999966666778999984 44477
Q ss_pred hHHHHHHHHHhhccCccc-----CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 276 LAARVKSQLKRLARPMYS-----NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
+++++...........+. ....+.+.++...+. . .+.+++..++.+++++++.+.|. +++. +.+
T Consensus 217 l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~--~-----~~~~~~~~~~~~~~~~~l~~~L~-~~~g---~~~ 285 (424)
T 2po3_A 217 LAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLT--S-----LDAFPEVIDRNRRNHAAYREHLA-DLPG---VLV 285 (424)
T ss_dssp HHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHHHHHTC-SCTT---EEE
T ss_pred HHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHHHHHhc-cCCC---ccc
Confidence 666665533211110000 000111122211111 1 12345667777788888888888 7621 344
Q ss_pred cc-CCcc---eeee-c-------CCCHHHHHHhhhcCcEEEcCC--------------------C--e-----EEec---
Q 015283 351 IL-RQIG---MFSF-T-------GLNKAQSDNMTNKWHVYMTKD--------------------G--R-----ISLA--- 388 (410)
Q Consensus 351 ~~-~~~~---~~~~-~-------~~~~~~~~~ll~~~gi~v~~~--------------------g--R-----is~~--- 388 (410)
.. +.++ +++| + +.+.+.+.+.+.++||.+.+. + | |+++
T Consensus 286 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~ 365 (424)
T 2po3_A 286 ADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGT 365 (424)
T ss_dssp CCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCST
T ss_pred cCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCC
Confidence 43 3222 2322 2 234555555555679998651 0 3 6664
Q ss_pred CCCcccHHHHHHHHHHHhhh
Q 015283 389 GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 389 ~~~~~~i~~~~~~l~~~l~~ 408 (410)
.++++++++++++|+++++.
T Consensus 366 ~~t~e~i~~~~~~L~~~~~~ 385 (424)
T 2po3_A 366 AIGDDDIRRVADLLRLCATR 385 (424)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhh
Confidence 35899999999999988754
No 154
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.94 E-value=6.8e-26 Score=217.86 Aligned_cols=320 Identities=10% Similarity=0.034 Sum_probs=202.0
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc-----cCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-----EYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
+.+.|..+.+ ++.++.+.+++.+.+...... .|.. .....++++.+++++.. ++++|++
T Consensus 28 ~~~yld~~~~------~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~-- 93 (416)
T 1qz9_A 28 GVIYLDGNSL------GARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGA------RDGEVVV-- 93 (416)
T ss_dssp TCEECCTTTS------CCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTC------CTTSEEE--
T ss_pred CeEeecCCCc------CCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCC------CcccEEE--
Confidence 4566665543 344788888888877532101 1111 24456788888887532 2578999
Q ss_pred cCChhhHHHHHHHHHHHh----CCCCEE-EEcCCCCcchhhhhh----hC--CCCccceeeecCCCcccChhhHHHHHhc
Q 015283 108 GLSGTGSLRLAAALIERY----FPGAKV-LISSPTWGNHKNIFN----DA--RVPWSEYRYYDPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~----~~gd~V-l~~~p~y~~~~~~~~----~~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 176 (410)
++|+++++..+...+..+ .+||+| +++.++|+.+...+. .. |++++.++. ++++++.+.+
T Consensus 94 ~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~ 164 (416)
T 1qz9_A 94 TDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQ 164 (416)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCST
T ss_pred eCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCC
Confidence 999999998774443223 789975 455568876554332 23 877777764 6788888864
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccc
Q 015283 177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 256 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 256 (410)
+++++++++|+||||.+.+ +++|.++|++||+++|+|++|.. +. ... .+..+ +.++++.|++|.
T Consensus 165 ---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~-g~--~~~---~~~~~----~~d~~~~s~~K~ 228 (416)
T 1qz9_A 165 ---DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA-GA--VPV---DLHQA----GADYAIGCTYKY 228 (416)
T ss_dssp ---TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT-TT--SCC---CHHHH----TCSEEEECSSST
T ss_pred ---CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc-cC--cCC---Chhhc----CCCEEEecCccc
Confidence 6788888999999999887 67888889999999999999863 21 111 11111 245888999999
Q ss_pred ccccCCCc-ceEEEEeCCchhHHHHHHHHHhh-------------------ccCcccCCChhHHHHHHHHhCChhhHHHH
Q 015283 257 LGLYAERI-GAMNVVCSSSDLAARVKSQLKRL-------------------ARPMYSNPPVHGARIVANVVGNPALFDEW 316 (410)
Q Consensus 257 ~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~ 316 (410)
++ +|.|+ |++++ ++++++++....... ......+++..++.++...++...
T Consensus 229 l~-~g~~~~g~l~~---~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----- 299 (416)
T 1qz9_A 229 LN-GGPGSQAFVWV---SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFA----- 299 (416)
T ss_dssp TC-CCTTCCCEEEE---CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHT-----
T ss_pred CC-CCCCCeEEEEE---CHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHH-----
Confidence 75 57887 99855 666544432210000 001112334433333322322100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc----CCCCCcccccCC----cceeeecCC-CH-HHHHHhhhcCcEEEcCC--C-
Q 015283 317 KAEMEMMAGRIKNVRQKLFDSLSAKD----KSGKDWSFILRQ----IGMFSFTGL-NK-AQSDNMTNKWHVYMTKD--G- 383 (410)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~l~~~~----g~~~~~~~~~~~----~~~~~~~~~-~~-~~~~~ll~~~gi~v~~~--g- 383 (410)
.+.+++.+++++++++++.+.|+ ++ + +.+..+. .+.++|+.+ +. ++.+.+. ++||.+... +
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~~~~~~ 373 (416)
T 1qz9_A 300 QTDMASLRRKSLALTDLFIELVE-QRCAAHE----LTLVTPREHAKRGSHVSFEHPEGYAVIQALI-DRGVIGDYREPRI 373 (416)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHH-HHHTTSC----CEECSCSSGGGBCSEEEEECTTHHHHHHHHH-TTTEECEEETTTE
T ss_pred hcCHHHHHHHHHHHHHHHHHHHH-hhccCCC----eEEeCCCCHHHcCCEEEEecCCHHHHHHHHH-hCCcEeccCCCCe
Confidence 01235777888889999999888 75 4 3444442 244566554 23 3455555 469988643 2
Q ss_pred -eEEec--CCCcccHHHHHHHHHHHhhh
Q 015283 384 -RISLA--GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 384 -Ris~~--~~~~~~i~~~~~~l~~~l~~ 408 (410)
||+++ ..+++++++++++|++++++
T Consensus 374 lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 374 MRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp EEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 99986 45899999999999998865
No 155
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.94 E-value=3.2e-25 Score=213.83 Aligned_cols=326 Identities=14% Similarity=0.008 Sum_probs=200.2
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|..-...|+ .+|.+.+++.+.+.......| +.....++++.+++++. ..+++++ ++||++
T Consensus 52 ~~~iD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~-------~~~~v~~--~~~g~e 119 (424)
T 2e7u_A 52 NRYLDYVMSWGPLILGH--AHPKVLARVRETLERGLTFGA-PSPLEVALAKKVKRAYP-------FVDLVRF--VNSGTE 119 (424)
T ss_dssp CEEEESSGGGTTCTTCB--TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHCT-------TCCEEEE--ESSHHH
T ss_pred CEEEEccccccccccCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCCHHH
Confidence 45789988864223354 368999999888765321233 23334566666666632 2678999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh-hC-------------CC------CccceeeecCCCcccChhhHHHH
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA-------------RV------PWSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~-------------g~------~~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
++..+.++.+.+.+++.|++.+|+|.++..... .. |. ++..++. .|++.+++.
T Consensus 120 a~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 192 (424)
T 2e7u_A 120 ATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV 192 (424)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence 999986654445667899999999988654322 11 21 1122221 378999988
Q ss_pred HhcCCCCcEEEEeCCCCCC-CCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEe
Q 015283 174 IKAAPGGSFILLHGCAHNP-TGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 251 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NP-tG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (410)
+++.++++++++ ++|+|+ ||.+. +.+.+++|.++ ++||+++|+||+|.+|..+ ....... .+...++ .
T Consensus 193 l~~~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g----~~~~~~~-~~~~~di---~ 262 (424)
T 2e7u_A 193 LKRRGEEIAAII-FEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLA----FGGATEL-LGLKPDL---V 262 (424)
T ss_dssp HHHHGGGEEEEE-ECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSS----TTHHHHH-HTCCCSE---E
T ss_pred HHhCCCCEEEEE-EeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccc----hhHHHHH-hCCCcch---h
Confidence 874222455555 456554 89765 78889999999 9999999999999987422 1122211 2222343 3
Q ss_pred cccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 015283 252 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 331 (410)
Q Consensus 252 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
|+||.++ +|+|+||+++ ++++++.+......... .+.+.+.+++.++...|+.. .+ .++..+++++++
T Consensus 263 s~sK~l~-~G~~~G~~~~---~~~~~~~~~~~~~~~~~-~t~~~~~~~~aaa~aal~~~------~~-~~~~~~~~~~~~ 330 (424)
T 2e7u_A 263 TLGKILG-GGLPAAAYAG---RREIMEKVAPLGPVYQA-GTLSGNPLAMAAGLATLELL------EE-NPGYYAYLEDLG 330 (424)
T ss_dssp EECGGGG-TTSSCEEEEE---CHHHHTTBTTTSSBCCC-CTTCSCHHHHHHHHHHHHHH------HH-CTHHHHHHHHHH
T ss_pred hhhhhhh-CCcceEEEEE---cHHHHhhhcccCCcccC-CCCCCCHHHHHHHHHHHHHH------Hh-ccHHHHHHHHHH
Confidence 9999999 5999999855 67744443220000111 12244555655555444311 11 124556666667
Q ss_pred HHHHHHhhhcc----CCCCCcccccCCcceeeecCCC------------------HHHHHHhhhcCcEEEcCCC--eEEe
Q 015283 332 QKLFDSLSAKD----KSGKDWSFILRQIGMFSFTGLN------------------KAQSDNMTNKWHVYMTKDG--RISL 387 (410)
Q Consensus 332 ~~l~~~l~~~~----g~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ll~~~gi~v~~~g--Ris~ 387 (410)
+++.+.|+ ++ +. .....+ .|.|.|+.+. .++...++ ++||.+.|++ |+.+
T Consensus 331 ~~l~~~L~-~~~~~~~~---~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~ 404 (424)
T 2e7u_A 331 ARLEAGLK-EVLKEKGL---PHTVNR-VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNFEAAFL 404 (424)
T ss_dssp HHHHHHHH-HHHHHTTC---CCEEEE-ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSSSCEEC
T ss_pred HHHHHHHH-HHHHhCCC---ceEEEe-eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCCCceEe
Confidence 77777666 54 42 112233 4556665442 12455665 4799999986 4433
Q ss_pred c-CCCcccHHHHHHHHHHHh
Q 015283 388 A-GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 388 ~-~~~~~~i~~~~~~l~~~l 406 (410)
+ ..+++++++++++|++++
T Consensus 405 ~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 405 SVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp CTTCCHHHHHHHHHHHHHHC
T ss_pred eccCCHHHHHHHHHHHHHhC
Confidence 2 249999999999998864
No 156
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.94 E-value=5.1e-25 Score=213.96 Aligned_cols=343 Identities=12% Similarity=0.069 Sum_probs=208.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCc---cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...+|+..|..-...|+. +|.+.+++.+.+...... .| +.....++++.+++++ + ..+++|++ ++|
T Consensus 50 ~~~lD~~~~~~~~~lG~~--~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~--~~g 118 (449)
T 3a8u_X 50 RKVYDSLSGLWTCGAGHT--RKEIQEAVAKQLSTLDYSPGFQY-GHPLSFQLAEKITDLT----P--GNLNHVFF--TDS 118 (449)
T ss_dssp CEEEETTHHHHTCTTCBS--CHHHHHHHHHHTTTCSCCCSSSC-CCHHHHHHHHHHHTTS----S--TTEEEEEE--ESS
T ss_pred CEEEECCccHhhccCCCC--CHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhC----C--CCCCEEEE--cCc
Confidence 346788766632233443 689999998887542111 22 2222345555555543 2 13678999 999
Q ss_pred hhhHHHHHHHHHHHhC------CCCEEEEcCCCCcchhh-hhhhCCC------------Cccceeeec--CCC-cccC--
Q 015283 111 GTGSLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYD--PKT-VGLD-- 166 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~--~~~-~~~d-- 166 (410)
|+++++++.+++..+. +||+|++.+|+|.++.. .+...|. .+..++... ..+ .++|
T Consensus 119 gsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~ 198 (449)
T 3a8u_X 119 GSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPK 198 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChH
Confidence 9999999866554322 67999999999987643 3433331 223333211 011 1245
Q ss_pred ------hhhHHHHHhcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 167 ------FEGMIADIKAAP-GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 167 ------~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
++.+++.+++.+ ++++++++++.+|+||. +.+.+.+++|.++|++||+++|+||+|.+|+..+ ..+.+.
T Consensus 199 ~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g---~~~~~~ 275 (449)
T 3a8u_X 199 EGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTG---SMFGAD 275 (449)
T ss_dssp SSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccC---cchhhh
Confidence 889998887422 24566665444678997 5678889999999999999999999998886431 112222
Q ss_pred HHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHH-----hhccCcccCCChhHHHHHHHHhCChhh
Q 015283 239 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK-----RLARPMYSNPPVHGARIVANVVGNPAL 312 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~a~~~l~~~~~ 312 (410)
. .....+++ |+||.++ +| +|+||+++ ++++++.+..... ......+.+.+.+++.++...|+..
T Consensus 276 ~-~~~~~di~---s~sK~l~-~G~~~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~-- 345 (449)
T 3a8u_X 276 S-FGVTPDLM---CIAKQVT-NGAIPMGAVIA---STEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLL-- 345 (449)
T ss_dssp H-HTCCCSEE---EECGGGG-TTSSCCEEEEE---EHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHH--
T ss_pred h-cCCCCCEE---EEccccc-CCCCceEEEEE---CHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHH--
Confidence 2 22223433 8999998 57 99999854 5675554432100 0011122344556655555444321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCCC-----H-----HHHHHhhhcCcEEEcCC
Q 015283 313 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----K-----AQSDNMTNKWHVYMTKD 382 (410)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~ll~~~gi~v~~~ 382 (410)
.+ +...++++++++++.+.|+ +++.-..+... +..|.|+|+.+. . ++...+++ +||.+.++
T Consensus 346 ----~~--~~~~~~~~~~~~~l~~~L~-~l~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~ 416 (449)
T 3a8u_X 346 ----QK--ENLVQSVAEVAPHFEKALH-GIKGAKNVIDI-RNFGLAGAIQIAPRDGDAIVRPFEAGMALWK-AGFYVRFG 416 (449)
T ss_dssp ----HH--TTHHHHHHHHHHHHHHHHH-TTTTSTTEEEE-EEETTEEEEEECCBTTBSSHHHHHHHHHHHH-HTEECEEE
T ss_pred ----Hh--cCHHHHHHHHHHHHHHHHH-HHhcCCCeEEE-eeeEEEEEEEEecCcccccccHHHHHHHHHH-CCcEEecC
Confidence 11 2355677778888888887 65310101112 334566665431 1 45666765 59999986
Q ss_pred C---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 383 G---RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 383 g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
| ||+++ ..+++++++++++|+++++++
T Consensus 417 g~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 417 GDTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 5 88854 349999999999999998764
No 157
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.94 E-value=9.1e-26 Score=219.15 Aligned_cols=339 Identities=12% Similarity=0.017 Sum_probs=195.8
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...+|+..|.+....|+. +|.+.+++.+++... .+|....+..+.++++++++....+.. ..+++++ ++||++
T Consensus 61 ~~ylD~~~~~~~~~lGh~--~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~--~~sGse 133 (451)
T 3oks_A 61 NRLIDLGSGIAVTTVGNS--APKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSAL--FNSGSE 133 (451)
T ss_dssp CEEEESSHHHHTCTTCTT--CHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEE--ESSHHH
T ss_pred CEEEEcCCCccccccCCC--CHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEE--eCcHHH
Confidence 356788877553344543 689999998887553 223333344444555555543332211 1468999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCC--------------CCccceeeec--------CCCc---ccChh
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR--------------VPWSEYRYYD--------PKTV---GLDFE 168 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g--------------~~~~~v~~~~--------~~~~---~~d~~ 168 (410)
|++.+.++.....+++.|++.+++|.++.......+ ..+..++... .+.. ..+++
T Consensus 134 A~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 213 (451)
T 3oks_A 134 AVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAK 213 (451)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHH
Confidence 999997665444456899999999987654433221 1233344320 0000 01344
Q ss_pred hHHHHHhc--CCCCcEEEEeCCCCCCCC-C-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcC
Q 015283 169 GMIADIKA--APGGSFILLHGCAHNPTG-I-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 244 (410)
Q Consensus 169 ~l~~~i~~--~~~~~~~ii~~~p~NPtG-~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 244 (410)
.+++.+.+ .++.+.+++ +.|.|++| . ..+.+.+++|.++|++||+++|+||+|.+|+..+ ..+.... .+..
T Consensus 214 ~~~~~l~~~~~~~~~aavi-~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~-~~~~ 288 (451)
T 3oks_A 214 RAITVIDKQIGADNLAAVV-IEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTG---AMFACEH-EGID 288 (451)
T ss_dssp HHHHHHHHHTCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGG-GTCC
T ss_pred HHHHHHHhhcCCCCEEEEE-EcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccc---cchhhhh-cCCC
Confidence 44455542 112344444 56666655 3 3366669999999999999999999999886432 1222211 1222
Q ss_pred CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 015283 245 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 324 (410)
Q Consensus 245 ~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 324 (410)
.+++ ||||.++. |+|+||+++ ++++++. +.......+.+.+.+++.++...|+..+ + +...
T Consensus 289 pdi~---t~sK~l~~-G~~iG~v~~---~~~~~~~----~~~~~~~~t~~~~~~~~aaa~aal~~~~------~--~~~~ 349 (451)
T 3oks_A 289 PDLI---VTAKGIAG-GLPLSAVTG---RAEIMDS----PHVSGLGGTYGGNPIACAAALATIETIE------S--EGLV 349 (451)
T ss_dssp CSEE---EECGGGGT-TSSCEEEEE---EHHHHTC----SCTTSBCCSSSSCHHHHHHHHHHHHHHH------H--TTHH
T ss_pred CCee---eehhhhhC-CcceEEEEE---CHHHHhh----hcCCCcCCCCCCCHHHHHHHHHHHHHHh------h--hhHH
Confidence 2333 89999985 999999754 6774443 3322223334566667766655554210 0 1223
Q ss_pred HHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceeeecCC--------C----HHHHHHhhhcCcEEEcCCC------
Q 015283 325 GRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL--------N----KAQSDNMTNKWHVYMTKDG------ 383 (410)
Q Consensus 325 ~~~~~~~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~ll~~~gi~v~~~g------ 383 (410)
++++++.+++.+.|.+ ..+. +....+ .|.|.++.+ + ..+...+++ +||.+.|++
T Consensus 350 ~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~i 424 (451)
T 3oks_A 350 ARAQQIEKIMKDRLGRLQAEDDR---IGDVRG-RGAMIAMELVKAGTTEPDADLTKALCAGAHA-AGVIVLSCGTYGNVV 424 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT---EEEEEE-ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHH-TTEECEEECTTSCEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCC---eEEEEE-eeEEEEEEEecCccCCCCHHHHHHHHHHHHh-CCcEEecCCCCCCEE
Confidence 3344444444444430 3331 222233 344554432 1 233555655 699998864
Q ss_pred eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 384 RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 384 Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
||+++. .+++++++++++|++++++
T Consensus 425 Ri~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 425 RFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 777553 3899999999999999864
No 158
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.93 E-value=4.1e-25 Score=208.22 Aligned_cols=308 Identities=11% Similarity=0.034 Sum_probs=196.4
Q ss_pred ccccHHHHHHHHHhhccCC--CccCcCC--cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283 51 PYVLDVVKKAENLMLERGE--NKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~--~~~y~~~--~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~ 126 (410)
..+++.+.+++.+.+.... ...+.+. .-..++++.+++++ +.. +++++++ ++||++++.++. .....
T Consensus 13 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~v~~--~~g~t~al~~~~--~~l~~ 83 (362)
T 3ffr_A 13 SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLL----ELP-SNYEVLF--LASATEIWERII--QNCVE 83 (362)
T ss_dssp CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTEEEEE--ESCHHHHHHHHH--HHHCS
T ss_pred cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEE--eCCchHHHHHHH--HhccC
Confidence 3457888877776654432 1111111 12345555555554 322 2567888 999999999983 33355
Q ss_pred CCCEEEEcCCCCcc-hhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283 127 PGAKVLISSPTWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i 205 (410)
+ +.+++..+.|.. +...++..|++++.++. +.++.+|+++++ +. ++++++++++|+||||.+++ +++|
T Consensus 84 ~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~--~~---~~~~~v~~~~~~nptG~~~~---l~~i 152 (362)
T 3ffr_A 84 K-KSFHCVNGSFSKRFYEFAGELGREAYKEEA--AFGKGFYPADIT--VP---ADAEIICLTHNETSSGVSMP---VEDI 152 (362)
T ss_dssp S-EEEEEECSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCGGGCC--CC---TTCCEEEEESEETTTTEECC---HHHH
T ss_pred C-cEEEEcCcHHHHHHHHHHHHhCCCeEEEec--CCCCCCCHHHHh--cc---CCccEEEEEcCCCCcceeCC---HHHH
Confidence 6 555566666662 34466778999999987 455788999998 33 46778888999999999887 5667
Q ss_pred HHHHHHc-CCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhHHHHHHH
Q 015283 206 ADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQ 283 (410)
Q Consensus 206 ~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~ 283 (410)
.++|++| |+++|+|++|..+... .+ + . ..++++.|+||.++ ++|+ |++++ ++++++++...
T Consensus 153 ~~la~~~p~~~li~D~a~~~~~~~-~~-----~----~--~~d~~~~s~~K~~~~~~G~--g~~~~---~~~~~~~~~~~ 215 (362)
T 3ffr_A 153 NTFRDKNKDALIFVDAVSSLPYPK-FD-----W----T--KIDSVFFSVQKCFGLPAGL--GVWIL---NDRVIEKSKAL 215 (362)
T ss_dssp TTSGGGSTTSEEEEECTTTTTSSC-CC-----T----T--SCSEEEEETTSTTCCCSCC--EEEEE---EHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEecccccCCcc-cC-----h----h--HCcEEEEecccccCCCCce--EEEEE---CHHHHHHhhhc
Confidence 7779999 9999999997654421 11 0 0 14588899999998 7774 66644 67766666543
Q ss_pred HH----------------hhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCC
Q 015283 284 LK----------------RLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSG 345 (410)
Q Consensus 284 ~~----------------~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~ 345 (410)
.. ...... ..+++..++.++...++. +. .+.+++.+++++++++++.+.|+ ++ |
T Consensus 216 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~--~~---~~~~~~~~~~~~~~~~~l~~~L~-~~~g-- 287 (362)
T 3ffr_A 216 LAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGD--ML---QISADGIRKQTEEKAALINTYIE-SSKV-- 287 (362)
T ss_dssp HHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH--HH---HHCHHHHHHHHHHHHHHHHHHHH-HCSS--
T ss_pred cccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHH--HH---HccHHHHHHHHHHHHHHHHHHHH-HccC--
Confidence 22 000111 223444444443333321 00 11246788888999999999998 77 4
Q ss_pred CCcccccC----CcceeeecCC--CH-HHHHHhhhcCcEEEcCC------C--eEEecC-CCcccHHHHHHHHHHHh
Q 015283 346 KDWSFILR----QIGMFSFTGL--NK-AQSDNMTNKWHVYMTKD------G--RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 346 ~~~~~~~~----~~~~~~~~~~--~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
+....+ ..+.++|+.+ +. ++.+.|.+ .||.+.+| + ||++.. .+++++++++++|++++
T Consensus 288 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 288 --FSFGVEDAKLRSMTTIVANTTMLPGEINKILEP-FDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp --EEESSSCGGGBCSSEEEEEESSCHHHHHHHHGG-GTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred --ceeccCChhhcCCceEEEecCCCHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 343331 2233344322 44 44566665 49999875 2 999764 48899999999999875
No 159
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.4e-25 Score=217.20 Aligned_cols=322 Identities=13% Similarity=0.121 Sum_probs=214.7
Q ss_pred HHHHHHHHHhhccC---CCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh---CCC
Q 015283 55 DVVKKAENLMLERG---ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---FPG 128 (410)
Q Consensus 55 ~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~---~~g 128 (410)
+.+.+++.+.+... ....|....|..++++.+++++.+.+|.+.+++++++ ++||++++.++...+... .+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~--~~ggt~a~~~a~~a~~~~~~~~~g 155 (497)
T 3mc6_A 78 DDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTT--TSGGTESLLLACLSAKMYALHHRG 155 (497)
T ss_dssp HHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEE--ESSHHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEE--cCcHHHHHHHHHHHHHHHHHhcCC
Confidence 55666555554321 1134555667888999988888777776655678988 999999999985544321 145
Q ss_pred ---CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283 129 ---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 129 ---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i 205 (410)
|.|+++.|+|..+...+...|.+++.+++.+ +++.+|++.+++.+++ +++++++++|+||||.+.+ +++|
T Consensus 156 ~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~---l~~i 228 (497)
T 3mc6_A 156 ITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINK---NTVLLVGSAPNFPHGIADD---IEGL 228 (497)
T ss_dssp CSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCS---SEEEEEEETTCTTTCCCCS---CTTT
T ss_pred CCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhh---CCEEEEEECCCCCCCcCCC---HHHH
Confidence 8999999999999999999999999999842 4678999999999875 6788889999999999766 5577
Q ss_pred HHHHHHcCCcccccccCCCCCCC-----CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283 206 ADVIQEKNHIPFFDVAYQGFASG-----SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 206 ~~~~~~~~~~li~Deay~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
.++|++||+++|+|++|.++... +.. ....+. ....+.++++.|++|.++ +|.++||+ +++++. ...
T Consensus 229 ~~la~~~g~~livD~a~~~~~~~f~~~~~~~-~~~~~~--~~~~g~d~~~~s~~K~l~-~~~~~g~~--~~~~~~-~~~- 300 (497)
T 3mc6_A 229 GKIAQKYKLPLHVDSCLGSFIVSFMEKAGYK-NLPLLD--FRVPGVTSISCDTHKYGF-APKGSSVI--MYRNSD-LRM- 300 (497)
T ss_dssp TTHHHHTTCCEEEETTTTHHHHGGGTTTTCC-SCCCCS--TTSTTCCEEEEETTTTTC-CCSSCEEE--ECSSHH-HHT-
T ss_pred HHHHHHhCCEEEEECcchhhhhhhhhhhccc-CCcccc--ccCCCCcEEEECchhhcC-CCCCceeE--EecCHH-HHh-
Confidence 77799999999999998754210 000 000000 112234678889999864 67888997 344433 211
Q ss_pred HHHHHhhccCccc-----CCC---------hhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCC
Q 015283 281 KSQLKRLARPMYS-----NPP---------VHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSG 345 (410)
Q Consensus 281 ~~~~~~~~~~~~~-----~~~---------~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~ 345 (410)
........+. .+. ..++.++...+.+ +.+++..++..++++++.+.|+ +. +.
T Consensus 301 ---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~--------~~~~~~~~~~~~~~~~l~~~L~-~~~~g- 367 (497)
T 3mc6_A 301 ---HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGE--------NGYIESCQEIVGAAMKFKKYIQ-ENIPD- 367 (497)
T ss_dssp ---TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH-HSCTT-
T ss_pred ---hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHH-hcCCC-
Confidence 1111111111 000 2223333333322 2345777788888899999998 73 21
Q ss_pred CCcccc-cCCcceeeec--CCCHHH-HHHhhhcCcEEEcCCC-----eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 346 KDWSFI-LRQIGMFSFT--GLNKAQ-SDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 346 ~~~~~~-~~~~~~~~~~--~~~~~~-~~~ll~~~gi~v~~~g-----Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.+. ++..+++.|. +.+... .+.|.+ +||.+.+++ |+++...+++++++++++|+++++++
T Consensus 368 --~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~ 437 (497)
T 3mc6_A 368 --LDIMGNPRYSVISFSSKTLNIHELSDRLSK-KGWHFNALQKPVALHMAFTRLSAHVVDEICDILRTTVQEL 437 (497)
T ss_dssp --CEECSCCCSSEEEEECTTTTHHHHHHHHHT-TTCBCEECCSSCCEEEECCTTTTCTHHHHHHHHHHHHHHH
T ss_pred --EEEecCCCeeEEEEeCCCCCHHHHHHHHHh-CCEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 3443 3555555553 334444 555554 699886543 89887669999999999999998653
No 160
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.93 E-value=3.1e-25 Score=216.17 Aligned_cols=340 Identities=11% Similarity=0.011 Sum_probs=206.9
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCc----ccHHHHHHHHHHhcCCCCCcccCCceEEEecC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE----GLAAFNKVTAELLFGADNSVLKEQRVATVQGL 109 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~----g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 109 (410)
...||+..|......|+. +|.+.+++.+++.... ..|.... ...++++.+++++. ...+++++ ++
T Consensus 55 ~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~lae~l~~~~~------~~~~~v~~--~~ 123 (472)
T 3hmu_A 55 EEILDAMAGLWCVNIGYG--RDELAEVAARQMRELP-YYNTFFKTTHVPAIALAQKLAELAP------GDLNHVFF--AG 123 (472)
T ss_dssp CEEECTTHHHHTCTTCBC--CHHHHHHHHHHHHHCS-CCCSSSSEECHHHHHHHHHHHHHSC------TTEEEEEE--ES
T ss_pred CEEEECCCchhhccCCCC--CHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCC------CCCCEEEE--eC
Confidence 467888888543355654 6899999888875422 2232222 33455555555531 12568999 99
Q ss_pred ChhhHHHHHHHHHHHh------CCCCEEEEcCCCCcchhhhhhhCCCC------------ccceeeec--C-CCcccC--
Q 015283 110 SGTGSLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARVP------------WSEYRYYD--P-KTVGLD-- 166 (410)
Q Consensus 110 ggt~a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~------------~~~v~~~~--~-~~~~~d-- 166 (410)
||++|++.+++++..+ .++++|++.+|+|.++.......+.. +..++... . +.+ .|
T Consensus 124 sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~ 202 (472)
T 3hmu_A 124 GGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPE 202 (472)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHH
Confidence 9999999997777554 24689999999998876544433321 22333210 0 111 22
Q ss_pred ------hhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhH
Q 015283 167 ------FEGMIADIKAAP-GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 238 (410)
Q Consensus 167 ------~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 238 (410)
++.+++.+.+.. +++++|++.+++|++|.+. +.+.+++|.++|++||+++|+||+|.+|+..+ ..+...
T Consensus 203 ~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G---~~~a~~ 279 (472)
T 3hmu_A 203 EFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTG---NWFGTQ 279 (472)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSCHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccC---ccchhH
Confidence 678888876422 3567777677788888765 77889999999999999999999999987432 222222
Q ss_pred HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH
Q 015283 239 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 318 (410)
Q Consensus 239 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~ 318 (410)
. .+..++++ +|||.++.+|+|+||+++ ++++++.+.. .......+.+.+.+++.++...|+..+ +
T Consensus 280 ~-~~v~pdi~---t~sK~l~gg~~plG~v~~---~~~i~~~~~~--~~~~~~~t~~~np~a~aAa~aaL~~~~------~ 344 (472)
T 3hmu_A 280 T-MGIRPHIM---TIAKGLSSGYAPIGGSIV---CDEVAHVIGK--DEFNHGYTYSGHPVAAAVALENLRILE------E 344 (472)
T ss_dssp H-HTCCCSEE---EECGGGTTTSSCCEEEEE---EHHHHHHHTT--SCBCCCCTTTTCHHHHHHHHHHHHHHH------H
T ss_pred H-hCCCCcee---eechhhhcCCcceEEEEE---CHHHHHhccc--CCccccCCCCCCHHHHHHHHHHHHHHH------H
Confidence 2 22333444 689999865599999855 7775555411 111112233455666666655544110 0
Q ss_pred HHHHHHHHHH-HHHHHHHHHhhhccCCCCCcccccCCcceeeecCC--C--------------H-HHHHHhhhcCcEEEc
Q 015283 319 EMEMMAGRIK-NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N--------------K-AQSDNMTNKWHVYMT 380 (410)
Q Consensus 319 ~~~~~~~~~~-~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~--------------~-~~~~~ll~~~gi~v~ 380 (410)
+...++++ ++.+++.+.|+ ++.....+....+.+. |.++.+ + . .+...+++ +||.+.
T Consensus 345 --~~~~~~~~~~~~~~l~~~L~-~l~~~~~v~~vr~~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~ 419 (472)
T 3hmu_A 345 --ENILDHVRNVAAPYLKEKWE-ALTDHPLVGEAKIVGM-MASIALTPNKASRAKFASEPGTIGYICRERCFA-NNLIMR 419 (472)
T ss_dssp --TTHHHHHHHTHHHHHHHHHH-GGGGSTTEEEEEEETT-EEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHH-TTBCCE
T ss_pred --hHHHHHHHHHHHHHHHHHHH-HHhcCCCeEEEEecCc-eEEEEEecCccccccccchhHHHHHHHHHHHHH-CCcEEE
Confidence 23344555 56666666665 5421011223334433 333221 1 2 33556665 699999
Q ss_pred CCC---eEEec-CCCcccHHHHHHHHHHHhhh
Q 015283 381 KDG---RISLA-GLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 381 ~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~ 408 (410)
|+| ||+.+ ..+++++++++++|++++++
T Consensus 420 ~~g~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 420 HVGDRMIISPPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp EETTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 876 88743 24999999999999998865
No 161
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.93 E-value=6.9e-25 Score=216.58 Aligned_cols=319 Identities=12% Similarity=0.037 Sum_probs=210.5
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCce--EEEecCChhhHHHHHHHHHHHhCCC---
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPG--- 128 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i--~~~~t~ggt~a~~~~~~~~~~~~~g--- 128 (410)
.+.+.+++........ ..|....+..++++++++++.+.+|.+.+++++ ++ ++||++++..+.+.+ ..+|
T Consensus 113 ~~~~~~~~~~~~~~~~-~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~--t~ggt~a~~~al~a~--~~~g~~~ 187 (514)
T 3mad_A 113 IAFLNEVYALQSQSNP-LHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTV--TSGGTESLLLAMKTY--RDWARAT 187 (514)
T ss_dssp HHHHHHHHHHHTTCCT-TCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEE--ESSHHHHHHHHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHhhcCC-cccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEE--cCcHHHHHHHHHHHH--HHHhhhh
Confidence 3455555555443332 344445567788888888877777765555777 77 999999999985544 3343
Q ss_pred -----CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283 129 -----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 203 (410)
Q Consensus 129 -----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~ 203 (410)
|+|+++.|+|..+...++..|.+++.+++. .++.+|++.+++.+++ +++++++++|+||||.+.+ ++
T Consensus 188 ~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~---~~~~v~~~~~~nptG~~~~---l~ 259 (514)
T 3mad_A 188 KGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD--ADYRADVAAMREAITP---NTVVVAGSAPGYPHGVVDP---IP 259 (514)
T ss_dssp HCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC--TTSCBCHHHHHHHCCT---TEEEEEEETTCTTTCCCCC---HH
T ss_pred cCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC--CCCCCCHHHHHHHhcc---CCEEEEEeCCCCCCccccC---HH
Confidence 999999999999999999999999999983 3678999999999975 6788888999999999876 67
Q ss_pred HHHHHHHHcCCcccccccCCCCCCC---CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283 204 KIADVIQEKNHIPFFDVAYQGFASG---SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 204 ~i~~~~~~~~~~li~Deay~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
+|.++|++||+++|+|++|.++... ........+. ....+.++++.|++|.++ +|.++|+++ ++++. +
T Consensus 260 ~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~--~~~~g~d~~~~s~~K~l~-~~~~~g~~~--~~~~~----~ 330 (514)
T 3mad_A 260 EIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD--FRLEGVTSVSADTHKYGY-GAKGTSVIL--YRRPD----L 330 (514)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS--TTSTTCCEEEECTTTTTC-CCSSCEEEE--ESSHH----H
T ss_pred HHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc--ccCCCCcEEEECchhccC-CCCCeEEEE--EeCHH----H
Confidence 7888899999999999999887531 0000000000 112235788899999864 678899984 44433 1
Q ss_pred HHHHHhhcc----------Cc-ccCCChh---HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015283 281 KSQLKRLAR----------PM-YSNPPVH---GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 346 (410)
Q Consensus 281 ~~~~~~~~~----------~~-~~~~~~~---~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 346 (410)
.. ...... .. ....+.. ++.++...+. .+.+++..++..++++++.+.|+ +++.
T Consensus 331 ~~-~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~--------~~~~~~~~~~~~~~~~~l~~~L~-~~~g-- 398 (514)
T 3mad_A 331 LH-YQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLG--------EEGYLDATRRILQAADRLKAGVR-AIPS-- 398 (514)
T ss_dssp HT-TTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-TSTT--
T ss_pred hc-cccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHh-hCCC--
Confidence 11 110000 00 1112221 2222222222 22346778888889999999998 7631
Q ss_pred CcccccCCcceeeec--CCCHH-HHHHhhhcCcEEEcCC---C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283 347 DWSFILRQIGMFSFT--GLNKA-QSDNMTNKWHVYMTKD---G--RISLAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 347 ~~~~~~~~~~~~~~~--~~~~~-~~~~ll~~~gi~v~~~---g--Ris~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
+.+..+..+++.+. +.+.. +.+.+.+ +||.+... + |+++.. .+++++++++++|++++++
T Consensus 399 -~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 399 -LKILGDPLWVIAVASDELNIYQVMEEMAG-RGWRLNGLHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp -CEESSCCSSEEEEECSSSCHHHHHHHHHT-TTCBCEEETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred -eEEeCCCeEEEEEeCCCCCHHHHHHHHHh-cCCEeccCCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 45454444433332 23444 4556655 59887321 1 888763 2568999999999998865
No 162
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.93 E-value=5.5e-25 Score=208.48 Aligned_cols=317 Identities=12% Similarity=0.055 Sum_probs=206.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
.+++|++.|.+ + ..+ +.+++.+.+... .|.+..+..++++++++++.. +++++ ++||++
T Consensus 6 ~~~~~l~~~~~------~-~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~ 64 (374)
T 3uwc_A 6 VPYSYLERQFA------D-IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHNA--------PHAIG--VGTGTD 64 (374)
T ss_dssp BCSCCHHHHTS------S-CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTTC--------SEEEE--ESCHHH
T ss_pred ceeeccccCCC------C-chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhCC--------CcEEE--eCCHHH
Confidence 35678887765 2 245 888887776543 476788999999999999632 25667 899999
Q ss_pred HHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 114 SLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 114 a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
++..+ +... +.+||+|+++.|+|..+...++..|.+++.+++. +++.+|++.+++.+++ ++++++ |+||
T Consensus 65 a~~~~--~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~---~~~~v~---~~n~ 134 (374)
T 3uwc_A 65 ALAMS--FKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITD---KTKAIM---PVHY 134 (374)
T ss_dssp HHHHH--HHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCT---TEEEEC---CBCG
T ss_pred HHHHH--HHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCC---CceEEE---EeCC
Confidence 99887 3344 5699999999999999999999999999999884 6678899999988865 566666 8899
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEE
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVV 270 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~ 270 (410)
||.+.+ +++|.++|+++|+++|+|++|..+... +.... . . ..++++.|+| |.++.+|. .|++ +
T Consensus 135 ~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~--~~~~~-----~-~-~~d~~~~s~~~~K~l~~~g~-~g~~--~ 199 (374)
T 3uwc_A 135 TGNIAD---MPALAKIAKKHNLHIVEDACQTILGRI--NDKFV-----G-S-WGQFACFSLHPLKNLNVWSD-AGVI--I 199 (374)
T ss_dssp GGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEE--TTEET-----T-S-SSSEEEEECSSSSSSCCSSC-CEEE--E
T ss_pred cCCcCC---HHHHHHHHHHcCCEEEEeCCCccCcee--CCeec-----c-c-cccEEEEeCCCCCcCCccce-eEEE--E
Confidence 999654 677888899999999999998765421 11111 0 1 1256777866 99986565 6776 4
Q ss_pred eCCchhHHHHHHHHHhhcc--------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 271 CSSSDLAARVKSQLKRLAR--------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
++++++.+++......... ........+.+.++...+. .+++..++.+++.+++.+.|+ ++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~----------~~~~~~~~~~~~~~~l~~~l~-~~ 268 (374)
T 3uwc_A 200 THSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMN----------QLETITEKRRGIAHLYDQSFV-DL 268 (374)
T ss_dssp ESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGG----------GHHHHHHHHHHHHHHHHHHTG-GG
T ss_pred eCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhc-cC
Confidence 5566655554432211000 0001122222222221111 124566677778888888888 76
Q ss_pred CCCCCcccc-cCCcceeee----c-CCCHHHHHHhhhcCcEEEcCC-----------------------------C--eE
Q 015283 343 KSGKDWSFI-LRQIGMFSF----T-GLNKAQSDNMTNKWHVYMTKD-----------------------------G--RI 385 (410)
Q Consensus 343 g~~~~~~~~-~~~~~~~~~----~-~~~~~~~~~ll~~~gi~v~~~-----------------------------g--Ri 385 (410)
+. .+... .+..+...| + ..+.+.+.+.+.++||.+.++ + |+
T Consensus 269 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl 346 (374)
T 3uwc_A 269 SE--FIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITL 346 (374)
T ss_dssp TT--TEECCCCCTTEECCCSSEEEEETTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEE
T ss_pred CC--eEEeccCCCCCceeeEEEEEEcCCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEc
Confidence 51 01111 122122221 1 124444444444569988664 1 56
Q ss_pred EecC-CCcccHHHHHHHHHHHhhhc
Q 015283 386 SLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 386 s~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
++.. +|++|++++++.|++++++.
T Consensus 347 ~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 347 PAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 5443 58999999999999998753
No 163
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.93 E-value=7.8e-25 Score=213.74 Aligned_cols=360 Identities=11% Similarity=0.030 Sum_probs=215.0
Q ss_pred cCCCCCCCCCcccchhHhhh--cCCCCeeeeeeee-eecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHH
Q 015283 11 EGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGA-YRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 87 (410)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~-~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia 87 (410)
.+++.+.|.++..+..+... .....++++..|. ++|.....++ +.+.+++.+.+..+. ..|.+..+..+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la 84 (467)
T 2oqx_A 7 FRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVK 84 (467)
T ss_dssp SCCCCCCCCCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHH
T ss_pred hheeeecccccccHHHHHHHHHHcCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCc-ceeccCchhHHHHHHHH
Confidence 35666777766655543332 2334567888774 3444333332 777777777765443 56877788899999999
Q ss_pred HHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCC-----C----CEEEEcCCCCcchhhhhhhCCCCccce---
Q 015283 88 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP-----G----AKVLISSPTWGNHKNIFNDARVPWSEY--- 155 (410)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~-----g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v--- 155 (410)
+++.. +++++ |+||++|+.++...+ ..+ | |+|++..+.|..+.......|..+...
T Consensus 85 ~~~~~--------~~v~~--t~~gt~A~~~al~~~--~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~ 152 (467)
T 2oqx_A 85 NIFGY--------QYTIP--THQGRGAEQIYIPVL--IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIK 152 (467)
T ss_dssp HHHCC--------SEEEE--EC--CCSHHHHHHHH--HHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCT
T ss_pred HHhCc--------CcEEE--cCCcHHHHHHHHHHH--hccccccCCCCccceEEecccccccchhhhhccCcceeecccc
Confidence 99732 57888 999999999985544 446 7 998887544444444444455443322
Q ss_pred ---eee--cCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCC----
Q 015283 156 ---RYY--DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG---- 224 (410)
Q Consensus 156 ---~~~--~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~---- 224 (410)
+.. ...++.+|++.+++.+++.+ ++++++++++|+||| |.+++.+++++|+++|++||++||+|+++..
T Consensus 153 ~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~ 232 (467)
T 2oqx_A 153 EAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAY 232 (467)
T ss_dssp TTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHH
T ss_pred ccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhh
Confidence 110 01345689999999997421 256777778999998 9999999999999999999999999966422
Q ss_pred ------CCCCCCCCchhHhHHH-hhcCCcEEEEeccccccccc-CCCcceEEEEeCCch-hH---HHHHHHHHhhccC-c
Q 015283 225 ------FASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSD-LA---ARVKSQLKRLARP-M 291 (410)
Q Consensus 225 ------~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~-G~r~G~l~~~~~~~~-~~---~~~~~~~~~~~~~-~ 291 (410)
..+.+ .+...+... .... + +++.|+||.+|++ | ||++ + +++ ++ .++.......... .
T Consensus 233 ~~~~~~~~~~g--~~~~~~~~~~~~~~-d-~~~~s~sK~~g~~~G---g~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~ 302 (467)
T 2oqx_A 233 FIKQREAEYKD--WTIEQITRETYKYA-D-MLAMSAKKDAMVPMG---GLLC--M-KDDSFFDVYTECRTLCVVQEGFPT 302 (467)
T ss_dssp HHHHHCGGGTT--SCHHHHHHHHGGGC-S-EEEEESSSTTCCSSC---EEEE--E-CSGGGHHHHHHHHHHHHHTTSSCC
T ss_pred hcccccccccC--ccHHHHhhhhhccC-C-eEEEecccccCCCCc---eEEE--e-cChhHHHHHHHHHHhhhccCCccc
Confidence 12211 111111100 0122 2 4578999999866 3 5653 3 444 33 3333221101000 1
Q ss_pred ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecCC-------C
Q 015283 292 YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N 364 (410)
Q Consensus 292 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-------~ 364 (410)
+...+..+..++...+.+ +.+ ++..++.+++++++.+.|+ +++ +.+. +.+++++|+.+ +
T Consensus 303 ~~~~~~~~~~al~~~l~~------~~~--~~~~~~~~~~~~~l~~~L~-~~~----~~~~-~~~~~~~~~~~~~~~~~~~ 368 (467)
T 2oqx_A 303 YGGLEGGAMERLAVGLYD------GMN--LDWLAYRIAQVQYLVDGLE-EIG----VVCQ-QAGGHAAFVDAGKLLPHIP 368 (467)
T ss_dssp CCCCCHHHHHHHHHHHHH------TTC--HHHHHHHHHHHHHHHHHHH-HTT----CCEE-EECSSCEEEEHHHHSTTSC
T ss_pred ccchhhhHHHHHHHhhHh------hhh--HHHHHHHHHHHHHHHHHHH-HCC----Ceee-cCCceEEEEechhhcccCC
Confidence 111122221111111110 000 1223445677888888898 765 3444 55677777643 2
Q ss_pred H-H-----HHHHhhhcCcEEEcC-C------------------C--eEEecC--CCcccHHHHHHHHHHHhhh
Q 015283 365 K-A-----QSDNMTNKWHVYMTK-D------------------G--RISLAG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 365 ~-~-----~~~~ll~~~gi~v~~-~------------------g--Ris~~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
. + +...+++++||.+.| + + ||+++. .+++++++++++|++++++
T Consensus 369 ~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 369 ADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp GGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred cccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 1 255663567999875 2 3 888773 4899999999999998764
No 164
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.93 E-value=2.3e-25 Score=209.80 Aligned_cols=290 Identities=11% Similarity=-0.029 Sum_probs=182.2
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC--EEEEcCCCCcchhh---hh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISSPTWGNHKN---IF 145 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd--~Vl~~~p~y~~~~~---~~ 145 (410)
..|++..+..++++++++++.. +..++ +++|++++.++. .....+|| .|+++.++|..+.. ..
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~~--------~~~i~--~~~G~~a~~~al--~~~~~~gd~~~vi~~~~~~~~~~~~~~~~ 108 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLGM--------DDAVF--FPSGTMAQQVAL--RIWSDETDNRTVAYHPLCHLEIHEQDGLK 108 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHHH--HHHHHHHTCCEEEECTTCHHHHSSTTHHH
T ss_pred ccccCChHHHHHHHHHHHHhCC--------CcEEE--ecCcHHHHHHHH--HHHhhcCCCcEEEecccceeeeeccchhh
Confidence 5687777899999999999643 22344 578888888763 33355777 67776666544332 34
Q ss_pred hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHcCCcccccccCCC
Q 015283 146 NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 224 (410)
Q Consensus 146 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 224 (410)
...|.+++.++. +++.+|++++++.. +++++++++|+||| |.+++.+++++|+++|++||++||+|++|..
T Consensus 109 ~~~g~~~~~v~~---~~~~~d~~~l~~~~-----~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 180 (357)
T 3lws_A 109 ELHPIETILVGA---ADRLMTLDEIKALP-----DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLF 180 (357)
T ss_dssp HHSSCEEEECSC---TTSCCCHHHHHTCC-----SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHH
T ss_pred hccCcEEEEecC---CCCCcCHHHHhcCc-----CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhh
Confidence 456777777763 34578999988761 25667789999998 9999999999999999999999999999752
Q ss_pred CCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH
Q 015283 225 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA 304 (410)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 304 (410)
........ ....+.... .+++.|+||.++.++. ||++. ++++++++........... ......+.++.
T Consensus 181 ~~~~~~~~---~~~~~~~~~--d~~~~s~sK~~~~~~g--g~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 248 (357)
T 3lws_A 181 EMLPYYEK---TAAEIAGLF--DSIYISFYKGLGGIAG--AILAG---PAAFCQTARIWKRRYGGDL--ISLYPYIVSAD 248 (357)
T ss_dssp HHHHHHTC---CHHHHHTTS--SEEEEESSSTTCCSSC--EEEEE---CHHHHHHHHHHHHHTTCCC--SCCHHHHHHHH
T ss_pred hhhhhcCC---ChHHHHhcC--CEEEEeccccCCCCce--EEEEc---CHHHHHHHHHHHHHhcCCc--ccchHHHHHHH
Confidence 11000001 111222222 2447899999943322 88644 8887776654322111111 11222222222
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc-ccCCcceeeecCC--C----HHHHHHhhhcCcE
Q 015283 305 NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGL--N----KAQSDNMTNKWHV 377 (410)
Q Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~--~----~~~~~~ll~~~gi 377 (410)
..|++ | . +..+++.++++++.+.|+ +++. +.+ ..+..++|+|+.+ . .+.+.+.+.++||
T Consensus 249 ~~l~~------~---~-~~~~~~~~~~~~l~~~L~-~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 314 (357)
T 3lws_A 249 YYYEL------R---K-DRMGQYYEQAKQLAEQFN-ALPG---VHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGL 314 (357)
T ss_dssp HHHHH------H---T-TCHHHHHHHHHHHHHHHH-TSTT---EEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCE
T ss_pred HHHHH------H---H-HHHHHHHHHHHHHHHHHH-hCCC---CeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCe
Confidence 22221 1 1 222345677888889998 7731 454 3456677888754 2 2334444555799
Q ss_pred EEcCC-----C----eEEecC----CCcccHHHHHHHHHHHh
Q 015283 378 YMTKD-----G----RISLAG----LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 378 ~v~~~-----g----Ris~~~----~~~~~i~~~~~~l~~~l 406 (410)
.+.|+ + |+++.. .+.+++++++++|++++
T Consensus 315 ~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 315 GFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp ESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred EEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 99886 2 777652 36788899999988775
No 165
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.93 E-value=1.8e-24 Score=208.12 Aligned_cols=198 Identities=18% Similarity=0.106 Sum_probs=145.1
Q ss_pred CcccccHHHHHHHHHhhccCCCccCcCCcc----cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH
Q 015283 49 LQPYVLDVVKKAENLMLERGENKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER 124 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g----~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~ 124 (410)
..+++++.+.+++.+.+.......|++..| ..++++.+++++ +. ++.++ +++|++++.++ +...
T Consensus 10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g~----~~~i~--~~~gt~al~~~--~~~~ 77 (418)
T 2c81_A 10 EWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----GV----PYCVP--TTSGSTALMLA--LEAL 77 (418)
T ss_dssp CSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----TC----SEEEE--ESCHHHHHHHH--HHHT
T ss_pred CCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----CC----CcEEE--eCCHHHHHHHH--HHHc
Confidence 445567999999988876543234766667 566777777774 22 24555 68889999887 3333
Q ss_pred -hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283 125 -YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 203 (410)
Q Consensus 125 -~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~ 203 (410)
+.+||+|+++.|+|..+...++..|++++.+++. .+++.+|++.+++.+++ ++++++ ++||||.. .+++
T Consensus 78 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~~~~G~~---~~~~ 147 (418)
T 2c81_A 78 GIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVE-ADTYCIDPQLIKSAITD---KTKAII---PVHLFGSM---ANMD 147 (418)
T ss_dssp TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCHHHHGGGCCT---TEEEEC---CBCCTTCC---CCHH
T ss_pred CCCCcCEEEECCCccHhHHHHHHHcCCEEEEEecC-CCCCCcCHHHHHHhhCC---CCeEEE---EeCCcCCc---ccHH
Confidence 5699999999999999999999999999999873 34678999999988864 567666 35799984 5678
Q ss_pred HHHHHHHHcCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHH
Q 015283 204 KIADVIQEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 204 ~i~~~~~~~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
+|.++|+++|+++|+|++|..+. +.+ ... .... .+.+.|| ||.++. | |+||+ +++++++++++
T Consensus 148 ~i~~~~~~~~~~li~D~a~~~~~~~~~---~~~-----~~~~--~~~~~s~s~~K~~~~-g-~~g~~--~~~~~~l~~~~ 213 (418)
T 2c81_A 148 EINEIAQEHNLFVIEDCAQSHGSVWNN---QRA-----GTIG--DIGAFSCQQGKVLTA-G-EGGII--VTKNPRLFELI 213 (418)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETT---EET-----TSSS--SEEEEECCTTSSSCS-S-SCEEE--EESCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECcccccCccCC---Eec-----cccc--ceEEEeccCCcccCC-C-CeEEE--EECCHHHHHHH
Confidence 88888999999999999998876 321 111 1111 3667777 999996 8 99997 44456766666
Q ss_pred HH
Q 015283 281 KS 282 (410)
Q Consensus 281 ~~ 282 (410)
..
T Consensus 214 ~~ 215 (418)
T 2c81_A 214 QQ 215 (418)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 166
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.93 E-value=5.9e-25 Score=213.28 Aligned_cols=340 Identities=11% Similarity=0.014 Sum_probs=210.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHH-H-HHHH---hhccCC--CccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVK-K-AENL---MLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~-~-a~~~---~~~~~~--~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
...+|+..|.+-...|+. +|.+. + ++.+ .+.... ...| +.....++++.+++++.. ...++|++
T Consensus 54 ~~ylD~~~~~~~~~lG~~--~p~v~~~~A~~~~~~~~~~~~~~~~~~-~~~~~~~la~~la~~~~~-----~~~~~v~~- 124 (449)
T 2cjg_A 54 RRYLDMFTFVASSALGMN--PPALVDDREFHAELMQAALNKPSNSDV-YSVAMARFVETFARVLGD-----PALPHLFF- 124 (449)
T ss_dssp CEEEESSHHHHTCSSCBS--CHHHHTCHHHHHHHHHHHTCCCCTTTC-CCHHHHHHHHHHHHHHCC-----TTCCEEEE-
T ss_pred cEEEEccCCccccCCCCC--CHHHHHHHHHHHHHHHHHhcCCCCccc-CCHHHHHHHHHHHHhcCC-----CCCCEEEE-
Confidence 356788777652233432 68888 8 8877 654321 1123 333456788888888641 13678999
Q ss_pred ecCChhhHHHHHHHHHHHhC------------CCCEEEEcCCCCcchhhhhh-hCCC-------------Cccceeeec-
Q 015283 107 QGLSGTGSLRLAAALIERYF------------PGAKVLISSPTWGNHKNIFN-DARV-------------PWSEYRYYD- 159 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~~~------------~gd~Vl~~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~- 159 (410)
++||++|++.+++++..+. +||+|++.+|+|.++..... ..|. .+..+|..+
T Consensus 125 -~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 203 (449)
T 2cjg_A 125 -VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRP 203 (449)
T ss_dssp -ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCT
T ss_pred -eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCc
Confidence 9999999999876554322 28999999999987654322 2221 334444422
Q ss_pred -CCC------cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 160 -PKT------VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 160 -~~~------~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
.+. ...+++.+++.+++..++++++++++++||||. +++.+++++|.++|++||+++|+||+|.+++..+
T Consensus 204 ~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g-- 281 (449)
T 2cjg_A 204 GLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTG-- 281 (449)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS--
T ss_pred hhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccC--
Confidence 110 024556688888643346777776666899995 8899999999999999999999999999887532
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHH-HHHhhccCcccCCChhHHHHHHHHhCCh
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS-QLKRLARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
..+.+.. .+...+++ |+||.+ |+||+++ ++++++.+.. .........+.+.+.+++.++...|+..
T Consensus 282 -~~~~~~~-~~~~~di~---t~sK~l-----~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~ 348 (449)
T 2cjg_A 282 -TAWAYQQ-LDVAPDIV---AFGKKT-----QVCGVMA---GRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVI 348 (449)
T ss_dssp -SSSTHHH-HTCCCSEE---EECGGG-----SSEEEEE---CGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred -cceeecc-cCCCceEE---EecCcc-----cEEEEEE---CHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHH
Confidence 1222222 22233433 789987 7899854 6675443211 0111111122345566666665554311
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceeeecCCC-----HHHHHHhhhcCcEEEcCCC
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKDG 383 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~g 383 (410)
.+ +...++++++++++.+.|+ ++. .+..+....+. |.|+++.+. .++..++++ +||.+.++|
T Consensus 349 ------~~--~~~~~~~~~~~~~l~~~L~-~l~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~g 417 (449)
T 2cjg_A 349 ------EA--EGLFERAVQHGKYLRARLD-ELAADFPAVVLDPRGR-GLMCAFSLPTTADRDELIRQLWQ-RAVIVLPAG 417 (449)
T ss_dssp ------HH--HTHHHHHHHHHHHHHHHHH-HHHHHSTTTSEEEEEE-TTEEEEECSSHHHHHHHHHHHHH-TTEECEEET
T ss_pred ------Hh--ccHHHHHHHHHHHHHHHHH-HHHhhCCCceeeEeec-cEEEEEEECChHHHHHHHHHHHH-CCeEEecCC
Confidence 11 2345666777777777776 542 11002223344 445445542 235667765 699999875
Q ss_pred ----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 384 ----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 ----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
||+++. .+++++++++++|+++++++
T Consensus 418 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 418 ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 886543 49999999999999998764
No 167
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.93 E-value=2.7e-24 Score=205.07 Aligned_cols=304 Identities=12% Similarity=-0.001 Sum_probs=201.6
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCEE
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKV 131 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~V 131 (410)
.++.+.+++.+.+... .|.+..+..++++++++++.. +++++ ++||++++.++. ... +.+||+|
T Consensus 18 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~al~~~~--~~~~~~~gd~V 82 (393)
T 1mdo_A 18 MGAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTGN--------QYAVA--VSSATAGMHIAL--MALGIGEGDEV 82 (393)
T ss_dssp CCHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHCC--------SEEEE--ESCHHHHHHHHH--HHTTCCTTCEE
T ss_pred CCHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhCC--------CcEEE--ecChHHHHHHHH--HHcCCCCCCEE
Confidence 3577788888877553 244567889999999999732 36777 899999999983 333 5699999
Q ss_pred EEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 015283 132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 211 (410)
Q Consensus 132 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~ 211 (410)
++++|+|..+...++..|.+++.+++. ++++.+|++.+++.+++ +++++++ +||||.+. ++++|.++|++
T Consensus 83 l~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~---~~~~v~~---~~~~G~~~---~~~~i~~l~~~ 152 (393)
T 1mdo_A 83 ITPSMTWVSTLNMIVLLGANPVMVDVD-RDTLMVTPEHIEAAITP---QTKAIIP---VHYAGAPA---DLDAIYALGER 152 (393)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECBC-TTTCCBCHHHHHHHCCT---TEEEECC---BCGGGCCC---CHHHHHHHHHH
T ss_pred EeCCCccHhHHHHHHHCCCEEEEEecc-CCcCCCCHHHHHHhcCC---CceEEEE---eCCCCCcC---CHHHHHHHHHH
Confidence 999999999999999999999999874 34577999999999875 5666664 35899965 47788888999
Q ss_pred cCCcccccccCCCCC-CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccC
Q 015283 212 KNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP 290 (410)
Q Consensus 212 ~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~ 290 (410)
+|+++|+|++|..+. +. ...+ .. .++++.|+||..+++|.|+||+ +++++++++++..........
T Consensus 153 ~~~~li~D~a~~~g~~~~---~~~~------~~--~d~~~~S~~k~K~l~~~~~g~~--~~~~~~~~~~l~~~~~~~~~~ 219 (393)
T 1mdo_A 153 YGIPVIEDAAHATGTSYK---GRHI------GA--RGTAIFSFHAIKNITCAEGGIV--VTDNPQFADKLRSLKFHGLGV 219 (393)
T ss_dssp HTCCBCEECTTCTTCEET---TEET------TS--SSEEEEECCTTSSSCSSSCEEE--EESCHHHHHHHHHHTBTTEEC
T ss_pred cCCeEEEECccccCCeEC---Ceec------CC--CCeEEEeCCCCCccccccceEE--EeCCHHHHHHHHHHHhcCCcc
Confidence 999999999988533 21 1111 11 6788999993333455688997 444477666655422110000
Q ss_pred ----------cc----------cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015283 291 ----------MY----------SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 350 (410)
Q Consensus 291 ----------~~----------~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 350 (410)
.+ ...+.+.+.++...+. .+++..++.+++++++.+.|. ++++ ++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~----------~~~~~~~~~~~~~~~l~~~L~-~~~~----~~ 284 (393)
T 1mdo_A 220 DAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ----------KLDALNARRAAIAAQYHQAMA-DLPF----QP 284 (393)
T ss_dssp C-----------CCEESSCCCBCCCCHHHHHHHHHHHH----------THHHHHHHHHHHHHHHHHHHH-TSSC----EE
T ss_pred cchhhhcccccccccccccCccCCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHh-cCCc----cc
Confidence 00 0123333222222222 234555566678888888888 7652 32
Q ss_pred c-c-----CCcceeeecCC-------CHHHHHHhhhcCcEEEcCC----------------------------C-eEEec
Q 015283 351 I-L-----RQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKD----------------------------G-RISLA 388 (410)
Q Consensus 351 ~-~-----~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~~----------------------------g-Ris~~ 388 (410)
. . +.+++++|+.+ +.+.+.+.+.++||.+.++ . |+++.
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~ 364 (393)
T 1mdo_A 285 LSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLF 364 (393)
T ss_dssp CCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCC
T ss_pred ccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCC
Confidence 2 1 13444555433 3444443344469987652 1 66665
Q ss_pred C-CCcccHHHHHHHHHHHhhhc
Q 015283 389 G-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 389 ~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
. .+++++++++++|++++...
T Consensus 365 ~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 365 PDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp TTCCHHHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHHHHHHhcC
Confidence 2 58999999999999998653
No 168
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.93 E-value=1.1e-24 Score=211.36 Aligned_cols=199 Identities=14% Similarity=0.108 Sum_probs=140.6
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FN 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~ 146 (410)
..|. ..|.+ +++++++++.+.++. +++++ +++|++++..+ +..+.+||+|++++|+|..+... ++
T Consensus 125 ~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~--~~sGt~al~~~---l~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~ 193 (464)
T 1ibj_A 125 YDYT-RSGNP-TRDALESLLAKLDKA----DRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVP 193 (464)
T ss_dssp CSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEE--ESSHHHHHHHH---HTTSCTTCEEEEESSCCHHHHHHHHHTSG
T ss_pred cccc-CCCCH-HHHHHHHHHHHHhCC----CeEEE--ECCHHHHHHHH---HHHhCCCCEEEEECCCchhHHHHHHHHHH
Confidence 4564 34544 566666665554442 35666 68889888776 23467999999999999998753 56
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..|.+++.++. .|++++++.+.+ +++++++++|+||||.+++ +++|+++|++||+++|+||+|....
T Consensus 194 ~~G~~v~~v~~-------~d~~~l~~~i~~---~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g~ 260 (464)
T 1ibj_A 194 RSGVVVKRVNT-------TKLDEVAAAIGP---QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_dssp GGTCEEEEECT-------TSHHHHHHHCCS---SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTT
T ss_pred HcCCEEEEeCC-------CCHHHHHHHhcc---CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 67888888876 278999998864 7888889999999999885 7788888999999999999987532
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
.. . .+ . .+.++++.|+||.++. +|+|+||+++ +++++++++..... ....+.+...+.++..
T Consensus 261 ~~----~--~~----~-~~~div~~S~sK~~~g~~Gl~~G~l~~--~~~~l~~~l~~~~~----~~g~~~~~~~~~a~~~ 323 (464)
T 1ibj_A 261 LS----R--PL----E-LGADIVMHSATKFIAGHSDVMAGVLAV--KGEKLAKEVYFLQN----SEGSGLAPFDCWLCLR 323 (464)
T ss_dssp TC----C--GG----G-TTCSEEEEETTTTTTCSSCCCCEEEEE--CSHHHHHHHHHHHH----HTTCBCCHHHHHHHHH
T ss_pred cC----C--hh----h-cCCEEEEECCcccccCCCCCcEEEEEE--ChHHHHHHHHHHHH----hcCCCCCHHHHHHHHh
Confidence 11 1 11 1 2478999999999864 4899999844 34576666544321 1122345666666666
Q ss_pred HhCCh
Q 015283 306 VVGNP 310 (410)
Q Consensus 306 ~l~~~ 310 (410)
.|++.
T Consensus 324 al~~~ 328 (464)
T 1ibj_A 324 GIKTM 328 (464)
T ss_dssp HHTTH
T ss_pred chhhH
Confidence 66653
No 169
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=2.6e-24 Score=206.85 Aligned_cols=327 Identities=17% Similarity=0.147 Sum_probs=193.0
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccC------cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
..++|..+.. + +++.+.+++.+.+.......| .......++++.+.+++...++. ++++|++ +
T Consensus 26 ~~i~l~~~~~------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~i~~--~ 94 (417)
T 3n0l_A 26 EGLEMIASEN------F-TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNC--KFANVQP--N 94 (417)
T ss_dssp HSEECCTTCC------C-CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCC--S
T ss_pred cCeeeecccC------C-CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCC--CCcceEe--c
Confidence 4577765442 2 379999998887633221233 22233345555333333222222 2456766 5
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 185 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii 185 (410)
+| ++++.+++. ..+.+||+|++++|+|..+.. .+...|..+..+++.-++++.+|++.+++.+.+ +++++++
T Consensus 95 sG-t~a~~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~--~~~~~v~ 169 (417)
T 3n0l_A 95 SG-SQANQGVYA--ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKK--EKPKLIV 169 (417)
T ss_dssp SH-HHHHHHHHH--HHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHH--HCCSEEE
T ss_pred cH-HHHHHHHHH--HhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHh--cCCeEEE
Confidence 55 899998843 347799999999999987654 333444444444432235677999999999974 1455666
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 264 (410)
+++|+| |...+ +++|.++|++||+++|+||+|. +..+.+... .. ....++++.|+||.+ +|+|.
T Consensus 170 ~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~--~~------~~~~di~~~s~sK~l--~g~~~ 234 (417)
T 3n0l_A 170 CGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHP--SP------FPYAHVVSSTTHKTL--RGPRG 234 (417)
T ss_dssp ECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC--CC------TTTCSEEEEESSTTT--CSCSC
T ss_pred ECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCC--Cc------cccceEEEeeCcccc--CCCCe
Confidence 677776 77666 7788888999999999999953 222111000 00 012468899999987 68899
Q ss_pred ceEEEEeCCchhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 265 GAMNVVCSSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
||++ ++++++.+.+.... ... ..+++...+.++...+.. .+.+++++.+++++++++++.+.|+ +.|
T Consensus 235 G~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~aa~~~a~~~-----~~~~~~~~~~~~~~~~~~~l~~~L~-~~g 302 (417)
T 3n0l_A 235 GIIM--TNDEELAKKINSAI----FPGIQGGPLMHVIAAKAVGFKF-----NLSDEWKVYAKQVRTNAQVLANVLM-DRK 302 (417)
T ss_dssp EEEE--ESCHHHHHHHHHHH----TTTTCSSCCHHHHHHHHHHHHH-----HTSHHHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred eEEE--ECCHHHHHHHhhhh----CCcccCCcHHHHHHHHHHHHHH-----HHhhhHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 9984 44467655554432 222 223333332222222211 0123346778888889999999998 766
Q ss_pred CCCCccccc-CCcceeeecCC-----CHHHHHHhhhcCcEEEcCC-------------C-eEEecC-----CCcccHHHH
Q 015283 344 SGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISLAG-----LSLAKCEYL 398 (410)
Q Consensus 344 ~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~ll~~~gi~v~~~-------------g-Ris~~~-----~~~~~i~~~ 398 (410)
+.... +..+.++|+.+ +.+.+.++++++||.+.+. + |+++.. +++++++++
T Consensus 303 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~ 378 (417)
T 3n0l_A 303 ----FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIV 378 (417)
T ss_dssp ----CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHH
T ss_pred ----ceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHH
Confidence 34333 23344555532 5666777777789998742 1 776542 468999999
Q ss_pred HHHHHHHhhh
Q 015283 399 ADAIIDSYHN 408 (410)
Q Consensus 399 ~~~l~~~l~~ 408 (410)
+++|+++++.
T Consensus 379 ~~~l~~~l~~ 388 (417)
T 3n0l_A 379 SNYIADILDD 388 (417)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999864
No 170
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.93 E-value=2.1e-24 Score=208.57 Aligned_cols=329 Identities=16% Similarity=0.115 Sum_probs=191.2
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCC---CccCcC----CcccHHHHHHHHHHhcCCCCCcccCCceEEEe
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 107 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~----~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 107 (410)
+.+.|..+.+ ++.++.+.+++.+.+.... ...|.. .....++|+++++++.. ++++|++
T Consensus 18 ~~~~Ld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~-- 83 (432)
T 3a9z_A 18 RKVYMDYNAT------TPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGG------KPQDIIF-- 83 (432)
T ss_dssp CCEECBTTTC------CCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTC------CGGGEEE--
T ss_pred CcEEeeCCcc------CCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCC------CcCeEEE--
Confidence 4555655543 3457899999888764311 012211 11246899999999732 2678999
Q ss_pred cCChhhHHHHHHHHHHH-h-----CCCCEEEEcCCCCcch-----------------hhhhhhCCCCccceeeecCCCcc
Q 015283 108 GLSGTGSLRLAAALIER-Y-----FPGAKVLISSPTWGNH-----------------KNIFNDARVPWSEYRYYDPKTVG 164 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~-~-----~~gd~Vl~~~p~y~~~-----------------~~~~~~~g~~~~~v~~~~~~~~~ 164 (410)
++||++++.++...+.. + .+||+|+++.|+|..+ ....+..|.+++.+++.+ +++.
T Consensus 84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~ 162 (432)
T 3a9z_A 84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK-VNGQ 162 (432)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCT-TTSS
T ss_pred eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCc-ccCC
Confidence 99999999998554421 1 4899999999999876 233345789999998742 2467
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC----------CcccccccCCCCCCCCCCCch
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN----------HIPFFDVAYQGFASGSLDNDA 234 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~----------~~li~Deay~~~~~~~~~~~~ 234 (410)
+|++.+++.+.+ +++++++++|+||||.+++.+ +|.++|++++ +++|+|++|..+.. ..
T Consensus 163 ~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~~~---~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~---~~-- 231 (432)
T 3a9z_A 163 VEVEDILAAVRP---TTCLVTIMLANNETGVIMPIS---EISRRIKALNQIRAASGLPRVLVHTDAAQALGKR---RV-- 231 (432)
T ss_dssp CCHHHHHHTCCT---TEEEEECCSBCTTTCBBCCHH---HHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS---CC--
T ss_pred cCHHHHHHhccC---CceEEEEECcccCcccccCHH---HHHHHHHhcCcccccccCCceEEEEEchhhhCCc---cc--
Confidence 899999998864 678888999999999999865 5677799998 99999999865331 11
Q ss_pred hHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh-HHHHHHHHHh---hccCcccCCChhHHHHHHHHhCCh
Q 015283 235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL-AARVKSQLKR---LARPMYSNPPVHGARIVANVVGNP 310 (410)
Q Consensus 235 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~l~~~ 310 (410)
.+.. .. ..+++.|+||.+| .|+||+++ +++. ...+...... .......+++..++.++...++.
T Consensus 232 -~~~~---~~-~d~~~~s~~K~~g---~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~- 299 (432)
T 3a9z_A 232 -DVED---LG-VDFLTIVGHKFYG---PRIGALYV---RGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADL- 299 (432)
T ss_dssp -CHHH---HC-CSEEEEEGGGTTC---CSCEEEEE---TTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHH-
T ss_pred -Chhh---cC-CCEEEEehhHhcC---CcceEEEE---ccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHH-
Confidence 1111 12 2356899999864 56899854 4442 1111100000 00011123444444444333331
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccC--------CcceeeecCC--CHHH-HHHhh---hcC
Q 015283 311 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILR--------QIGMFSFTGL--NKAQ-SDNMT---NKW 375 (410)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~--------~~~~~~~~~~--~~~~-~~~ll---~~~ 375 (410)
+.+.+++.+++++++++++.+.|+ ++ |.. +.+..+ ....|.+.+. +.+. ...+. .+.
T Consensus 300 -----~~~~~~~~~~~~~~~~~~l~~~L~-~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~ 371 (432)
T 3a9z_A 300 -----VSENCETYEAHMRDIRDYLEERLE-AEFGKR--IHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASV 371 (432)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHH-HHHGGG--EEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBS
T ss_pred -----HHhhHHHHHHHHHHHHHHHHHHHH-hccCCc--EEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEec
Confidence 123456788889999999999888 64 410 111111 1122344432 3333 33221 112
Q ss_pred cEEEcC-------------C-------C--eEEecCC-CcccHHHHHHHHHHHhhhc
Q 015283 376 HVYMTK-------------D-------G--RISLAGL-SLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 376 gi~v~~-------------~-------g--Ris~~~~-~~~~i~~~~~~l~~~l~~~ 409 (410)
|+.+.+ | + ||+++.. +++++++++++|+++++++
T Consensus 372 G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~ 428 (432)
T 3a9z_A 372 GASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL 428 (432)
T ss_dssp SCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 322211 1 3 9998753 7999999999999988653
No 171
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=1.3e-24 Score=207.31 Aligned_cols=313 Identities=14% Similarity=0.023 Sum_probs=200.4
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
+++++++.|.| .+++.+.+++.+.+..+ .|. +..+..++|+++++++.. +++++ ++|||
T Consensus 22 ~~~~~l~~~~p-------~~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~~gt 81 (391)
T 3dr4_A 22 SDLPRISVAAP-------RLDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCGV--------KHAIA--CNNGT 81 (391)
T ss_dssp ------CCCCC-------CCCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHTC--------SEEEE--ESSHH
T ss_pred CCCceeccCCC-------CCCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhCC--------CcEEE--eCCHH
Confidence 46778887765 23578888887776543 354 677899999999999733 25666 89999
Q ss_pred hHHHHHHHHHHH-hCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCC
Q 015283 113 GSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 191 (410)
Q Consensus 113 ~a~~~~~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~N 191 (410)
+++..+ +... +.+||+|++++|+|..+...++..|.+++.+++. .+++.+|++.+++.+++ ++++++ |+|
T Consensus 82 ~al~~~--l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~---~~~~v~---~~n 152 (391)
T 3dr4_A 82 TALHLA--LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDND-PRTFNLDAAKLEALITP---RTKAIM---PVH 152 (391)
T ss_dssp HHHHHH--HHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCGGGSGGGCCT---TEEEEC---CBC
T ss_pred HHHHHH--HHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecC-ccccCcCHHHHHHhcCC---CceEEE---EEC
Confidence 999987 3444 5699999999999999999999999999999883 35678999999988864 666666 678
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEE
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNV 269 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~ 269 (410)
|||... ++++|.++|+++|+++|+|++|...... .+. . . ... ..+.+.||| |.++ |.+.|++
T Consensus 153 ~tG~~~---~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~---~---~-~~~-~di~~~S~s~~K~l~--~g~gg~~-- 216 (391)
T 3dr4_A 153 LYGQIC---DMDPILEVARRHNLLVIEDAAEAVGATY-RGK---K---S-GSL-GDCATFSFFGNAIIT--TGEGGMI-- 216 (391)
T ss_dssp GGGCCC---CHHHHHHHHHHTTCEEEEECTTCTTCEE-TTE---E---T-TSS-SSEEEEECBTTSSSC--CBSCEEE--
T ss_pred CCCChh---hHHHHHHHHHHcCCEEEEECcccccceE-CCe---e---e-ccc-CCEEEEECCCCCcCC--cCCeEEE--
Confidence 999965 4677888899999999999998753321 000 0 0 011 136677766 6664 4567887
Q ss_pred EeCCchhHHHHHHHHHhhcc-------Cc---ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 270 VCSSSDLAARVKSQLKRLAR-------PM---YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
++.++++.+++......... .. ......+ .++..... .+.+++..++.+++.+++.+.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l--~aa~~~~~--------~~~~~~~~~~~~~~~~~l~~~L~ 286 (391)
T 3dr4_A 217 TTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNI--QAAIGLAQ--------LERVDEHLAARERVVGWYEQKLA 286 (391)
T ss_dssp EESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHH--HHHHHHHH--------HHTHHHHHHHHHHHHHHHHHHHG
T ss_pred EECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHH--HHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhh
Confidence 55666665555443211100 00 0112222 22221111 12234566777778888888888
Q ss_pred hccCCCCCcccccC------Cccee-eec------CCCHHHHHHhhhcCcEEEcCCC-----------------------
Q 015283 340 AKDKSGKDWSFILR------QIGMF-SFT------GLNKAQSDNMTNKWHVYMTKDG----------------------- 383 (410)
Q Consensus 340 ~~~g~~~~~~~~~~------~~~~~-~~~------~~~~~~~~~ll~~~gi~v~~~g----------------------- 383 (410)
++++ .+..+ ..+++ .++ +.+.+.+.+.+.++||.+.++.
T Consensus 287 -~~g~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~ 361 (391)
T 3dr4_A 287 -RLGN----RVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEAC 361 (391)
T ss_dssp -GGTT----SEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHH
T ss_pred -cCCc----cccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHH
Confidence 7753 32222 12222 122 2235444444444699887651
Q ss_pred -----eEEecC-CCcccHHHHHHHHHHHh
Q 015283 384 -----RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 384 -----Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
|+++.. +|++|++++++.|++++
T Consensus 362 ~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 362 GVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp HHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred HhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 555443 58999999999998875
No 172
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.92 E-value=1.4e-24 Score=212.13 Aligned_cols=316 Identities=12% Similarity=0.026 Sum_probs=208.1
Q ss_pred cHHHHHHHHHhhccCCCccCcC---CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH--hCCC
Q 015283 54 LDVVKKAENLMLERGENKEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER--YFPG 128 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~---~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~--~~~g 128 (410)
.|.+.+++.+.... .+.|.+ ..|..++++++++++.+..|.+. .+++ ++||++++..+...+.. ..+|
T Consensus 79 ~p~v~~~~~~~~~~--~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~--~~ggt~a~~~al~~~~~~~~~~G 151 (474)
T 1wyu_B 79 NPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLE--PAAGAHGELTGILIIRAYHEDRG 151 (474)
T ss_dssp CCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECC--CSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHh--cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeec--ChHHHHHHHHHHHHHHHHHHhcC
Confidence 35566665554321 244543 45777888888888766555432 3445 89999999875434332 2488
Q ss_pred C-----EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283 129 A-----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 203 (410)
Q Consensus 129 d-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~ 203 (410)
| +|++++|+|+.+...+...|.+++.+++. +++.+|++++++.+++ +++++++++| ||||.+ .++++
T Consensus 152 d~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~---~t~~v~~~~p-n~~G~~--~~~l~ 223 (474)
T 1wyu_B 152 EGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGP---HVAALMLTNP-NTLGLF--ERRIL 223 (474)
T ss_dssp CTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCST---TEEEEEECSS-CTTSCC--CTTHH
T ss_pred CccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCC---CceEEEEECC-CCCccc--CCCHH
Confidence 7 99999999999999999999999999873 4678999999999975 6777888888 689986 25789
Q ss_pred HHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccccc-C---CCcceEEEEeCCchhHHH
Q 015283 204 KIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-A---ERIGAMNVVCSSSDLAAR 279 (410)
Q Consensus 204 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G---~r~G~l~~~~~~~~~~~~ 279 (410)
+|+++|++||+++|+|++|.....+. ... ... +.++++.|++|.|+.| | .|+||+++ ++++++.
T Consensus 224 ~i~~l~~~~g~~li~Dea~~~~~~g~--~~~------~~~-g~di~~~s~~K~~~~p~g~gG~~~G~~~~---~~~l~~~ 291 (474)
T 1wyu_B 224 EISRLCKEAGVQLYYDGANLNAIMGW--ARP------GDM-GFDVVHLNLHKTFTVPHGGGGPGSGPVGV---KAHLAPY 291 (474)
T ss_dssp HHHHHHHHHTCEEEEEGGGGGGTTTT--CCH------HHH-TCSEEECCTTTTTCCCCTTSCCCCCCEEE---CGGGGGG
T ss_pred HHHHHHHHcCCEEEEeCchhhhhccC--CCc------ccC-CCcEEEEeCccccccCCCCCCCCeEEEEE---cHHHHHh
Confidence 99999999999999999996554321 111 111 3568888999999876 4 59999865 6664443
Q ss_pred HHHHHH-----hh----------ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 280 VKSQLK-----RL----------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 280 ~~~~~~-----~~----------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
+...+. .+ .+......+..++.++...+.... .+.+++..+++.++++++.+.|+ +.|
T Consensus 292 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g-----~~~l~~~~~~~~~~~~~l~~~L~-~~g- 364 (474)
T 1wyu_B 292 LPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLG-----LEGLKKAAALAVLNARYLKELLK-EKG- 364 (474)
T ss_dssp CCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH-HTT-
T ss_pred CCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHh-hcC-
Confidence 321000 00 000011234445555544443211 23456778889999999999998 765
Q ss_pred CCCcccccCCccee-eecC----CCH-HHHHHhhhcCcEEEc----C---CC--eEEecC-CCcccHHHHHHHHHHHhh
Q 015283 345 GKDWSFILRQIGMF-SFTG----LNK-AQSDNMTNKWHVYMT----K---DG--RISLAG-LSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 345 ~~~~~~~~~~~~~~-~~~~----~~~-~~~~~ll~~~gi~v~----~---~g--Ris~~~-~~~~~i~~~~~~l~~~l~ 407 (410)
+++..+...++ .|+. .+. ++.++|++ +||.+. | .+ ||+++. .+++++++++++|+++++
T Consensus 365 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 365 ---YRVPYDGPSMHEFVAQPPEGFRALDLAKGLLE-LGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp ---CBCSSCSSCCSCEEEBCSTTCCHHHHHHHHHH-TTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred ---cEecCCCCcceEEEEEcCCCCCHHHHHHHHHH-CCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 33322221221 2332 344 45666766 498752 1 12 999864 378999999999998875
No 173
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.92 E-value=2.3e-24 Score=210.73 Aligned_cols=330 Identities=12% Similarity=0.100 Sum_probs=207.1
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCcc------CcCCcccHHHHHHHHHHhcCCCCCcccC--CceEE
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNKVTAELLFGADNSVLKE--QRVAT 105 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~aia~~~~~~~~~~~~~--~~i~~ 105 (410)
.+.|+|..|.+ ++++.+++++.+.+.+....+ |....+.+++++++.+++.+.+|...+. .+|.+
T Consensus 44 ~~~i~L~a~e~-------~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~ 116 (483)
T 1rv3_A 44 RVGLELIASEN-------FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQP 116 (483)
T ss_dssp HSSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCC
T ss_pred hcCeEEEcCCC-------CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEE
Confidence 35788876653 247999999988775432223 3333455677766666666666654221 23666
Q ss_pred EecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh--------hhCCCCccceeee-cCCCcccChhhHHHHHhc
Q 015283 106 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--------NDARVPWSEYRYY-DPKTVGLDFEGMIADIKA 176 (410)
Q Consensus 106 ~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~--------~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~ 176 (410)
++|+ +++..+ +.+.+.|||+|++++|.|+++.... ...|..++.+++. +.+++.+|++++++.+.+
T Consensus 117 --~sGs-~an~~~--~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~ 191 (483)
T 1rv3_A 117 --YSGS-PANFAV--YTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARL 191 (483)
T ss_dssp --SSHH-HHHHHH--HHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH
T ss_pred --CCcH-HHHHHH--HHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhh
Confidence 5555 777775 3445789999999999998876432 2233224555542 235688999999999983
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccc
Q 015283 177 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSK 255 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 255 (410)
++++++++ +++||+ .+.+ +++|.++|+++|+++++|++|. ++...+. ...++ . ..++++.|+||
T Consensus 192 --~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~--~~~p~----~--~~div~~s~~K 256 (483)
T 1rv3_A 192 --FHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGV--VPSPF----E--HCHVVTTTTHK 256 (483)
T ss_dssp --HCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTS--SCCGG----G--TCSEEEEESSG
T ss_pred --cCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCC--CCCCC----C--CCcEEEecCcc
Confidence 15566666 788888 7665 6788888999999999999965 2221111 11111 1 24578899999
Q ss_pred cccccCCCcceEEEEeCCc--------------hhHHHHHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 015283 256 NLGLYAERIGAMNVVCSSS--------------DLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEM 320 (410)
Q Consensus 256 ~~~~~G~r~G~l~~~~~~~--------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 320 (410)
++ +|+|.||+++ +++ +..+++ ....... .++++.....++...+.... ...+
T Consensus 257 ~l--~GprgG~i~~--~~~~~~~~~~~g~~~~y~~~~~~----~~~~~~~~~g~~~~~~iaal~~Al~~~~-----~~~~ 323 (483)
T 1rv3_A 257 TL--RGCRAGMIFY--RRGVRSVDPKTGKEILYNLESLI----NSAVFPGLQGGPHNHAIAGVAVALKQAM-----TPEF 323 (483)
T ss_dssp GG--CCCSCEEEEE--ECSBCC-------CCBCCHHHHH----HHHHTTTTCCSCCHHHHHHHHHHHHHHT-----SHHH
T ss_pred cC--CCCCceEEEE--cchhhhhccccCcchhhHHHHHh----hhhcCCcccCCccHHHHHHHHHHHHHHh-----ChhH
Confidence 87 5889999854 332 222222 2222211 22333333222222222100 1224
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC-cceeeecC-----CCHHHHHHhhhcCcEEEc----CC--------
Q 015283 321 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-IGMFSFTG-----LNKAQSDNMTNKWHVYMT----KD-------- 382 (410)
Q Consensus 321 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~ll~~~gi~v~----~~-------- 382 (410)
+++++++.++++++.+.|. +.| +.+..+. ..++.|+. ++.+.+.++|++.||.+. ||
T Consensus 324 ~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~ 398 (483)
T 1rv3_A 324 KEYQRQVVANCRALSAALV-ELG----YKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPS 398 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTT----CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHH-hcC----CEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCc
Confidence 6778889999999999998 776 3544443 23455543 356666777777899998 64
Q ss_pred C-eEEecCC-C----cccHHHHHHHHHHHhhh
Q 015283 383 G-RISLAGL-S----LAKCEYLADAIIDSYHN 408 (410)
Q Consensus 383 g-Ris~~~~-~----~~~i~~~~~~l~~~l~~ 408 (410)
+ ||+++.. + +++++++++.|++++..
T Consensus 399 ~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 399 GLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp EEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 1 9997642 3 89999999999998754
No 174
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.92 E-value=6.4e-24 Score=201.11 Aligned_cols=305 Identities=10% Similarity=0.013 Sum_probs=201.6
Q ss_pred ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH---hCC
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER---YFP 127 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~---~~~ 127 (410)
+++++.+++++.+.+... .|.+.....++++++++++.. +++++ ++||++++.++. ... +.+
T Consensus 9 ~~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~~~~--~~~~~~~~~ 73 (375)
T 2fnu_A 9 PCLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLGV--------KHALV--FNSATSALLTLY--RNFSEFSAD 73 (375)
T ss_dssp CCCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHHH--HHSSCCCTT
T ss_pred CCCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHHH--HHhcccCCC
Confidence 445799999999887543 244556788999999999732 27888 999999999983 333 569
Q ss_pred CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283 128 GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 207 (410)
Q Consensus 128 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~ 207 (410)
||+|++++|+|..+...+...|++++.+++.+ ++.+|++.+++.+++ +++++++++| ||.+.+ +++|.+
T Consensus 74 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~---~~~~v~~~~~---tG~~~~---l~~i~~ 142 (375)
T 2fnu_A 74 RNEIITTPISFVATANMLLESGYTPVFAGIKN--DGNIDELALEKLINE---RTKAIVSVDY---AGKSVE---VESVQK 142 (375)
T ss_dssp SCEEEECSSSCTHHHHHHHHTTCEEEECCBCT--TSSBCGGGSGGGCCT---TEEEEEEECG---GGCCCC---HHHHHH
T ss_pred CCEEEECCCccHhHHHHHHHCCCEEEEeccCC--CCCCCHHHHHhhcCc---CceEEEEeCC---cCCccC---HHHHHH
Confidence 99999999999999999999999999998842 237899999888864 5666664444 999765 677888
Q ss_pred HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283 208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQLK 285 (410)
Q Consensus 208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 285 (410)
+|++||+++|+|++|..+.... .. . ..... ++.+.|+| |.+++ | +|++++ ++++++++++.....
T Consensus 143 l~~~~~~~li~D~a~~~~~~~~--~~-----~-~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~-~~~~~~~~~~~~~~~ 209 (375)
T 2fnu_A 143 LCKKHSLSFLSDSSHALGSEYQ--NK-----K-VGGFA-LASVFSFHAIKPITT-A--EGGAVV-TNDSELHEKMKLFRS 209 (375)
T ss_dssp HHHHHTCEEEEECTTCTTCEET--TE-----E-TTSSS-SEEEEECCTTSSSCC-S--SCEEEE-ESCHHHHHHHHHHTB
T ss_pred HHHHcCCEEEEECccccCCeEC--Ce-----e-ccccC-CeEEEeCCCCCCccc-c--CceEEE-eCCHHHHHHHHHHHh
Confidence 8999999999999987544210 00 1 11111 47788888 99975 6 688732 345676666544221
Q ss_pred hhcc---------Cccc---CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 015283 286 RLAR---------PMYS---NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 353 (410)
Q Consensus 286 ~~~~---------~~~~---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 353 (410)
.... .... ..+.+...++...+ +.+++..++.+++++++.+.|+ +++. +.+..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~----------~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~ 275 (375)
T 2fnu_A 210 HGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQL----------KKAPFLMQKREEAALTYDRIFK-DNPY---FTPLHP 275 (375)
T ss_dssp TTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHH----------TTHHHHHHHHHHHHHHHHHHHT-TCSS---EEESGG
T ss_pred cCCccccccccccccccccCCCCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHhh-cCCC---ccccCC
Confidence 1100 0011 22332222222111 1235667778888999999998 7631 343333
Q ss_pred ----Ccc-eeeecCC------CHH-HHHHhhhcCcEEEcC----C-----------------------C--eEEecC-CC
Q 015283 354 ----QIG-MFSFTGL------NKA-QSDNMTNKWHVYMTK----D-----------------------G--RISLAG-LS 391 (410)
Q Consensus 354 ----~~~-~~~~~~~------~~~-~~~~ll~~~gi~v~~----~-----------------------g--Ris~~~-~~ 391 (410)
..+ ++.++.+ +.+ +...| .++||.+.. + + ||++.. .+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t 354 (375)
T 2fnu_A 276 LLKDKSSNHLYPILMHQKFFTCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLN 354 (375)
T ss_dssp GCSSCCCCSCEEEEECGGGGGGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCC
T ss_pred CCCCCcceEEEEEEeCccccchHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCC
Confidence 122 2223322 333 34455 456999872 1 2 888764 48
Q ss_pred cccHHHHHHHHHHHhhhc
Q 015283 392 LAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 392 ~~~i~~~~~~l~~~l~~~ 409 (410)
++++++++++|+++++++
T Consensus 355 ~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 355 LESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 899999999999998764
No 175
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.92 E-value=3.2e-25 Score=208.97 Aligned_cols=306 Identities=12% Similarity=-0.003 Sum_probs=190.7
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCE--
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-- 130 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~-- 130 (410)
++|.+.+++.+.... ..|.+..+..++++.+++++... ..++ ++||++++.++.. ..+.+||+
T Consensus 27 ~~p~v~~ai~~~~~~---~~~~~~~~~~~l~~~la~~~~~~--------~~i~--~~~g~~a~~~a~~--~~~~~g~~~v 91 (359)
T 3pj0_A 27 VLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKILGKQ--------SAVF--FPSGTMAQQIALR--IWADRKENRR 91 (359)
T ss_dssp HHHHHTTTSCTTCBC---CBTTBSHHHHHHHHHHHHHHTCS--------EEEE--ESCHHHHHHHHHH--HHHHHHTCCE
T ss_pred CCHHHHHHHHhhccc---CcccCCHHHHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHHHH--HHHhcCCCcE
Confidence 468888877764322 55777788999999999996332 2344 5888899888743 33557776
Q ss_pred EEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q 015283 131 VLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT-GIDPTPEQWEKIA 206 (410)
Q Consensus 131 Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt-G~~~~~~~l~~i~ 206 (410)
|+++.++|..+.. .....|.+++.++. +++.+|++++++. . ++++++++++|+||| |.+++.+++++|+
T Consensus 92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~---~~~~~v~~~~p~n~~~G~~~~~~~l~~l~ 164 (359)
T 3pj0_A 92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-R---EPVSSVLIELPQREIGGQLPAFEELEKIS 164 (359)
T ss_dssp EEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-S---SCCSEEEEESSBGGGTSBCCCHHHHHHHH
T ss_pred EEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-c---CCceEEEEEecccCCCcccCCHHHHHHHH
Confidence 5555555443322 12446888888775 4567899999877 3 366777889999998 7999999999999
Q ss_pred HHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHh
Q 015283 207 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 286 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 286 (410)
++|++||++||+|++|..+....... ....+. . ...+++.|+||.++.++ + ||++ .++++++++......
T Consensus 165 ~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~-~-~~d~~~~s~sK~~~~~~-g-g~~~---~~~~l~~~~~~~~~~ 234 (359)
T 3pj0_A 165 EYCHEQGISLHLDGARLWEITPFYQK---SAEEIC-A-LFDSVYVSFYKGIGGIA-G-AILA---GNDDFVQEAKIWKRR 234 (359)
T ss_dssp HHHHHHTCEEEEEETTCGGGHHHHTC---CHHHHH-T-TCSEEEEESSSTTCCSS-C-EEEE---ECHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECcchhcchhhhCC---CHHHhh-c-cCCEEEEeccccCCCcc-e-EEEE---CCHHHHHHHHHHHHH
Confidence 99999999999999976443110001 111222 1 22355669999987552 2 5643 488877766543221
Q ss_pred hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc-cCCcceeeecCC--
Q 015283 287 LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI-LRQIGMFSFTGL-- 363 (410)
Q Consensus 287 ~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~-- 363 (410)
.... .......+.++...+++ .. +..+++.++++++.+.|+ ++.. +.+. .+..++|+|+.+
T Consensus 235 ~~~~--~~~~~~~~~a~~~~l~~---------~~-~~~~~~~~~~~~l~~~L~-~~~g---~~~~~~~~~~~~~~~~~~~ 298 (359)
T 3pj0_A 235 YGGD--LISLYPYILSADYYFEK---------RI-GKMAEYFEAAKGLAERFN-SCSG---VKTVPEVPVSNMFHVYFEN 298 (359)
T ss_dssp TTCC--CSCCHHHHHHHHHHHHH---------HG-GGHHHHHHHHHHHHHHHH-TSTT---EEEESSSCSSSEEEEEESS
T ss_pred hCCC--cchhHHHHHHHHHHHHH---------HH-HHhHHHHHHHHHHHHHHh-hCCC---ceeeccCCcceEEEEEecC
Confidence 1111 11122222222222221 11 233446778888899998 7621 4442 344556665533
Q ss_pred C----HHHHHHhhhcCcEEEcCCC----------eEEec----CCCcccHHHHHHHHHHHh
Q 015283 364 N----KAQSDNMTNKWHVYMTKDG----------RISLA----GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 364 ~----~~~~~~ll~~~gi~v~~~g----------Ris~~----~~~~~~i~~~~~~l~~~l 406 (410)
. .+.+.+.+.++||.+.|+. |+++. ..+.+++++++++|++++
T Consensus 299 ~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~l 359 (359)
T 3pj0_A 299 SADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL 359 (359)
T ss_dssp CHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred ccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 2 2334444455799999872 77664 236788888888888753
No 176
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.92 E-value=1.2e-24 Score=205.34 Aligned_cols=311 Identities=11% Similarity=0.023 Sum_probs=194.0
Q ss_pred CcccccHHHHHHHHHhhccCC--------CccCcCCcccHHHHHHHHHHhcCCCCCcccCC-c-eEEEecCChhhHHHHH
Q 015283 49 LQPYVLDVVKKAENLMLERGE--------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-R-VATVQGLSGTGSLRLA 118 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~-~-i~~~~t~ggt~a~~~~ 118 (410)
+..++++.+++++.+.+.... ..+|.+ +..++++++.+.+.+.+|. +++ + +++ |+||++++..+
T Consensus 11 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~~i~~--t~g~t~a~~~~ 84 (362)
T 2c0r_A 11 GPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGN--PTGYKVLFI--QGGASTQFAMI 84 (362)
T ss_dssp SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTC--CSSEEEEEE--SSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEE--CCCchHHHHHH
Confidence 444458999999988764210 011212 2334555555555444443 233 5 456 79999999998
Q ss_pred HHHHHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeeecC--CCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCC
Q 015283 119 AALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDP--KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 194 (410)
Q Consensus 119 ~~~~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG 194 (410)
+...+.+||+|+++++.+..+ ...++..| +++.++...+ .+..+|.++++ +. ++++++++++|+||||
T Consensus 85 --~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~---~~t~~v~~~~~~n~tG 156 (362)
T 2c0r_A 85 --PMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ---DNAAYLHLTSNETIEG 156 (362)
T ss_dssp --HHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC---TTEEEEEEESEETTTT
T ss_pred --HHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC---CCcCEEEEeCCcCccc
Confidence 344477999999887664432 35666789 9999987422 22234665553 43 3788888899999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
.+++ ++++| +|+++++|++|..+... . .+ ... ++++.|+||.+|++| +||+++ ++
T Consensus 157 ~~~~--~l~~i------~~~~vivD~a~~~~~~~---~---~~----~~~--d~~~~s~~K~~g~~G--~G~l~~---~~ 211 (362)
T 2c0r_A 157 AQFK--AFPDT------GSVPLIGDMSSDILSRP---F---DL----NQF--GLVYAGAQKNLGPSG--VTVVIV---RE 211 (362)
T ss_dssp EECS--SCCCC------TTSCEEEECTTTTTSSC---C---CG----GGC--SEEEEETTTTTCCSS--CEEEEE---EG
T ss_pred eecc--ccccc------CCCEEEEEChhhccCCc---c---ch----hHC--cEEEEeccccccCcC--cEEEEE---cH
Confidence 9754 34444 89999999998755421 1 11 112 477889999999888 799865 66
Q ss_pred hhHHHHHHHHHh--------hccCcccCCChhHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHhhhccC-
Q 015283 275 DLAARVKSQLKR--------LARPMYSNPPVHGARIVANVVGNPALFDEWKA--EMEMMAGRIKNVRQKLFDSLSAKDK- 343 (410)
Q Consensus 275 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~g- 343 (410)
++++++...... .......+++...+.++...|+.. .+ .+++.+++++++++++.+.|+ +++
T Consensus 212 ~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~ 284 (362)
T 2c0r_A 212 DLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWI------EERGGLEGVQQANRKKASLIYDAID-QSGG 284 (362)
T ss_dssp GGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHH------HHTTHHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred HHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHH------HHhCCHHHHHHHHHHHHHHHHHHHH-HcCC
Confidence 654433210000 011122345555555555444321 12 357888999999999999998 876
Q ss_pred CCCCccccc---CCcceeeecCC----CH-HHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 344 SGKDWSFIL---RQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 344 ~~~~~~~~~---~~~~~~~~~~~----~~-~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
+ +.... ..++.++++.+ +. ++++.| ++.||.+.++ + |||++. .++++++++++.|++++++
T Consensus 285 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 285 F---YRGCVDVDSRSDMNITFRLASEELEKEFVKAS-EQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp S---SEESSCGGGBCSSEEEEECSCHHHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred c---cccCCChHHcCCcEEEEEcCCcchHHHHHHHH-HHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 2 12211 12233344433 12 334454 5579988775 2 999874 3789999999999998765
Q ss_pred c
Q 015283 409 V 409 (410)
Q Consensus 409 ~ 409 (410)
.
T Consensus 361 ~ 361 (362)
T 2c0r_A 361 R 361 (362)
T ss_dssp H
T ss_pred c
Confidence 3
No 177
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.92 E-value=3.7e-25 Score=208.49 Aligned_cols=308 Identities=13% Similarity=0.063 Sum_probs=195.8
Q ss_pred ccccHHHHHHHHHhhccC---CCccCcC---Cc----ccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh-hhHHHHHH
Q 015283 51 PYVLDVVKKAENLMLERG---ENKEYLP---IE----GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG-TGSLRLAA 119 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~---~~~~y~~---~~----g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg-t~a~~~~~ 119 (410)
+++|+.+++++.+.+... ....|.. .. ...++++.+++++. .. ++++|++ ++|+ ++++.++
T Consensus 12 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g----~~-~~~~v~~--~~g~gt~al~~~- 83 (360)
T 1w23_A 12 SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ----IP-NDYQILF--LQGGASLQFTML- 83 (360)
T ss_dssp CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT----CC-TTEEEEE--ESSHHHHHHHHH-
T ss_pred cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEE--ECCcchHHHHHH-
Confidence 345799999998877431 0112211 12 34567777777753 22 2468888 8888 9999987
Q ss_pred HHHHHhCC---CCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHH-HHhcCCCCcEEEEeCCCCCCCCC
Q 015283 120 ALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA-DIKAAPGGSFILLHGCAHNPTGI 195 (410)
Q Consensus 120 ~~~~~~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~~~~~~ii~~~p~NPtG~ 195 (410)
+.+.+.+ ||.|+++.++|... ..++..| +++.+++.+++ +.+|++++++ .+++ +++++++++|+||||.
T Consensus 84 -~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~-~~~d~~~l~~~~i~~---~~k~v~~~~~~nptG~ 156 (360)
T 1w23_A 84 -PMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKAN-SYQSIPDFSEFQLNE---NDAYLHITSNNTIYGT 156 (360)
T ss_dssp -HHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGG-TSCSCCCGGGCCCCT---TEEEEEEESEETTTTE
T ss_pred -HHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeeccccc-CcCCccchHhhccCC---CCCEEEEeCCCCCcce
Confidence 3444544 56677776666543 3456789 99999884323 3378888887 6643 6788888999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCch
Q 015283 196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 275 (410)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~ 275 (410)
+++ ++ +++||+++|+|++|..+... . .+. .. +++++|+||.+|++| +||+++ +++
T Consensus 157 ~~~--~i------~~~~~~~li~D~a~~~~~~~---~---~~~----~~--di~~~s~sK~~~~~G--~G~~~~---~~~ 211 (360)
T 1w23_A 157 QYQ--NF------PEINHAPLIADMSSDILSRP---L---KVN----QF--GMIYAGAQKNLGPSG--VTVVIV---KKD 211 (360)
T ss_dssp ECS--SC------CCCCSSCEEEECTTTTTSSC---C---CGG----GC--SEEEEETTTTTSCTT--CEEEEE---EHH
T ss_pred ecc--cc------cccCCceEEEechhhcCCCC---c---Ccc----cC--CEEEEEcccccCCCC--cEEEEE---cHH
Confidence 887 33 23799999999998765521 1 111 11 378999999999766 799865 566
Q ss_pred hHHHHHHHHHhh--------ccCcccCCChhHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015283 276 LAARVKSQLKRL--------ARPMYSNPPVHGARIVANVVGNPALFDEWKA--EMEMMAGRIKNVRQKLFDSLSAKDKSG 345 (410)
Q Consensus 276 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~ 345 (410)
+++++....... ....+.+++..++.++...++. + .+ .+++.+++++++++++.+.|+ +++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~--~----~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~- 283 (360)
T 1w23_A 212 LLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDW--I----KDLGGAEAIAKQNEEKAKIIYDTID-ESNG- 283 (360)
T ss_dssp HHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH--H----HHTTHHHHHHHHHHHHHHHHHHHHH-TTTT-
T ss_pred HHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHH--H----HHhcCHHHHHHHHHHHHHHHHHHHH-HccC-
Confidence 444332210000 0111223444443444333321 1 11 356788899999999999998 7751
Q ss_pred CCcccc-cC--CcceeeecCCC-----HHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 346 KDWSFI-LR--QIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 346 ~~~~~~-~~--~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
.+... .+ .+++++|+.+. .++.+++ .++||.+.++ + ||+++. .+++++++++++|++++++
T Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 284 -FYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKA-KEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp -SSEESSCGGGBCSSEEEEECSSHHHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -cccccCCchhccCcEEEEEcCCCccHHHHHHHH-HHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 11221 12 34556776552 2234454 4479999886 2 999874 3889999999999998765
No 178
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.92 E-value=2.6e-24 Score=203.45 Aligned_cols=304 Identities=16% Similarity=0.119 Sum_probs=198.5
Q ss_pred cccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCE
Q 015283 52 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK 130 (410)
Q Consensus 52 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~ 130 (410)
++++.+.+++.+.+... .|.+..+..++++++++++.. +++++ ++|||+|+..+ +... +.+||+
T Consensus 13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~sGt~al~~a--l~~~~~~~gd~ 77 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVGA--------KYCIS--CANGTDALQIV--QMALGVGPGDE 77 (367)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHTTCCTTCE
T ss_pred ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHhCCCCcCE
Confidence 34688888888877553 455677899999999999733 36777 89999999987 3333 569999
Q ss_pred EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 015283 131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 210 (410)
Q Consensus 131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~ 210 (410)
|+++.|+|..+...+...|.+++.++.. .+++.+|++.+++.+.+ ++++++ |+||||. ..++++|.++|+
T Consensus 78 Vi~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~~~~G~---~~~~~~i~~la~ 147 (367)
T 3nyt_A 78 VITPGFTYVATAETVALLGAKPVYVDID-PRTYNLDPQLLEAAITP---RTKAII---PVSLYGQ---CADFDAINAIAS 147 (367)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCGGGTGGGCCT---TEEEEC---CBCGGGC---CCCHHHHHHHHH
T ss_pred EEECCCccHHHHHHHHHcCCEEEEEecC-CccCCcCHHHHHHhcCc---CCcEEE---eeCCccC---hhhHHHHHHHHH
Confidence 9999999999999999999999999883 34578999999998864 677666 8899997 455777888899
Q ss_pred HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecc--cccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283 211 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 288 (410)
Q Consensus 211 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~ 288 (410)
++|+++|+|++|..... .+.... . .. .++++.|| +|.++.+|. .|++ +++++++.+++........
T Consensus 148 ~~~~~li~D~a~~~g~~--~~~~~~-----~-~~-~di~~~Sf~~~K~l~~~g~-gg~~--~~~~~~l~~~~~~~~~~g~ 215 (367)
T 3nyt_A 148 KYGIPVIEDAAQSFGAS--YKGKRS-----C-NL-STVACTSFFPSAPLGCYGD-GGAI--FTNDDELATAIRQIARHGQ 215 (367)
T ss_dssp HTTCCBEEECTTTTTCE--ETTEET-----T-SS-SSEEEEECCTTSSSCCSSC-CEEE--EESCHHHHHHHHHHTBTTE
T ss_pred HcCCEEEEECccccCCe--ECCeec-----c-CC-CCEEEEECCCCCcCCCcCc-eeEE--EeCCHHHHHHHHHHHhcCC
Confidence 99999999999864331 111111 1 11 15778887 899986676 6776 5566776555544221100
Q ss_pred c--------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC--ccee
Q 015283 289 R--------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ--IGMF 358 (410)
Q Consensus 289 ~--------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~--~~~~ 358 (410)
. ......+.+.+.++...++ .+++..++.+++.+++.+.|+ +++.. +...... ..++
T Consensus 216 ~~~~~~~~~g~~~~~~~~~aa~~~~~l~----------~~~~~~~~~~~~~~~~~~~L~-~~~~~--~~~~~~~~~~~~~ 282 (367)
T 3nyt_A 216 DRRYHHIRVGVNSRLDTLQAAILLPKLE----------IFEEEIALRQKVAAEYDLSLK-QVGIG--TPFIEVNNISVYA 282 (367)
T ss_dssp EETTEECSCCCBCCCCHHHHHHHHHHHH----------THHHHHHHHHHHHHHHHHHHH-HTTCC--CCCCCTTEECCCS
T ss_pred CcCceeeccCcCCCccHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhc-cCCee--ccCCCCCCceeeE
Confidence 0 0112233433333333322 123455566667778888887 77531 1111111 1111
Q ss_pred -eecCC-CHHHHHHhhhcCcEEEcCCC----------------------------eEEec-CCCcccHHHHHHHHHHH
Q 015283 359 -SFTGL-NKAQSDNMTNKWHVYMTKDG----------------------------RISLA-GLSLAKCEYLADAIIDS 405 (410)
Q Consensus 359 -~~~~~-~~~~~~~ll~~~gi~v~~~g----------------------------Ris~~-~~~~~~i~~~~~~l~~~ 405 (410)
..+.. +.+.+.+.|+++||.+.++. |+++. .+|++|++++++.|++-
T Consensus 283 ~~~~~~~~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 283 QYTVRMDNRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp SEEEECSSHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred EEEEEeCCHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 11222 45554444455699775320 55544 36899999999998753
No 179
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.92 E-value=8.5e-24 Score=206.26 Aligned_cols=297 Identities=15% Similarity=0.058 Sum_probs=190.3
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCC---EEEEcCCCCcchhh----hhhhCCCC
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA---KVLISSPTWGNHKN----IFNDARVP 151 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd---~Vl~~~p~y~~~~~----~~~~~g~~ 151 (410)
..++++.+++++... +++|++ ++|+|++++++. ...+.+|| +|+++.|+|++... .++..|.+
T Consensus 113 ~~~l~~~la~~~g~~------~~~v~~--t~g~t~al~~~~--~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~ 182 (465)
T 3e9k_A 113 DESIVGLMKDIVGAN------EKEIAL--MNALTVNLHLLM--LSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLN 182 (465)
T ss_dssp THHHHGGGHHHHTCC------GGGEEE--CSCHHHHHHHHH--HHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCC------cCCEEE--ECCHHHHHHHHH--HHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCc
Confidence 356888888875332 688999 999999999973 33355554 59999999988544 56678988
Q ss_pred ccc--eeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 152 WSE--YRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 152 ~~~--v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
+.. ++..+ ++++.+|++++++.+.++.++++++++++|+||||.+.+ +++|.++|++||+++|+|++|......
T Consensus 183 ~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~ 259 (465)
T 3e9k_A 183 IEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVE 259 (465)
T ss_dssp HHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC
T ss_pred ceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcC
Confidence 754 22211 345778999999999743236888889999999999887 567777899999999999997643321
Q ss_pred CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHh---------hc-----------
Q 015283 229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR---------LA----------- 288 (410)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~---------~~----------- 288 (410)
. .+. ..+.+++++|++|.++....++|++++ +++..+.+...+.. ..
T Consensus 260 ---~---~~~----~~~~D~~~~s~~K~l~~gp~~~g~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 326 (465)
T 3e9k_A 260 ---L---YLH----DWGVDFACWCSYKYLNAGAGGIAGAFI---HEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGV 326 (465)
T ss_dssp ---C---CHH----HHTCCEEEECSSSTTCCCTTCCCEEEE---CGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSG
T ss_pred ---C---chh----hcCCCEEEECcccccccCCCceEEEEE---cHHHHhhcCCcccCccCCCCCcccccCCCcCcCCCh
Confidence 1 111 123568889999999322236799865 66654433211100 00
Q ss_pred -cCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-------CCCcccccCC----cc
Q 015283 289 -RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-------GKDWSFILRQ----IG 356 (410)
Q Consensus 289 -~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~-------~~~~~~~~~~----~~ 356 (410)
+...++++..+..++...+.. .. ...+++.+++.+++++++.+.|+ +.-. ...+++..+. .+
T Consensus 327 ~~~~~gt~~~~~~~a~~aal~~---~~--~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~g~~~~~p~~~~~~g 400 (465)
T 3e9k_A 327 CGFRISNPPILLVCSLHASLEI---FK--QATMKALRKKSVLLTGYLEYLIK-HNYGKDKAATKKPVVNIITPSHVEERG 400 (465)
T ss_dssp GGGCCSCCCHHHHHHHHHHHHH---HH--HHCHHHHHHHHHHHHHHHHHHHH-HHCC---------CEEECSCSSGGGBC
T ss_pred HHhccCCccHHHHHHHHHHHHH---HH--HcCHHHHHHHHHHHHHHHHHHHH-hhccccccccCCCCeEEeCCCCHhhcc
Confidence 000113333333333322221 11 11257888889999999999888 6300 0014444443 24
Q ss_pred eeeecCC--C-HHHHHHhhhcCcEEEcCC--C--eEEe--cCCCcccHHHHHHHHHHHhhh
Q 015283 357 MFSFTGL--N-KAQSDNMTNKWHVYMTKD--G--RISL--AGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 357 ~~~~~~~--~-~~~~~~ll~~~gi~v~~~--g--Ris~--~~~~~~~i~~~~~~l~~~l~~ 408 (410)
.++++.+ + .++.+.|.+ +||.+... + ||++ ...++++++++++.|++++++
T Consensus 401 ~~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 401 CQLTITFSVPNKDVFQELEK-RGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp SCEEEEECCTTCCHHHHHHT-TTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEecCCHHHHHHHHHH-CCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 4544432 2 345566655 59988643 2 9987 335899999999999999875
No 180
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.92 E-value=6e-24 Score=206.14 Aligned_cols=326 Identities=16% Similarity=0.126 Sum_probs=199.2
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCC---cccHHHH--HHHH-HHhcCCCCCcccCCceEEEec
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI---EGLAAFN--KVTA-ELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~lr--~aia-~~~~~~~~~~~~~~~i~~~~t 108 (410)
..|+|..+.. + ++|.+.+++.+.+.......|+.. .|....+ ++++ +++...++.. . ..++ +
T Consensus 46 ~~i~l~~~~~------~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~--~-~~v~--~ 113 (447)
T 3h7f_A 46 DTLEMIASEN------F-VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE--F-ANVQ--P 113 (447)
T ss_dssp HSEECCTTCC------C-CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS--E-EECC--C
T ss_pred CceeEecCCC------C-CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCC--c-eEEE--e
Confidence 4677764432 2 379999998877643322334321 2333333 3333 3333333321 2 2222 5
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh---hhhCCCC--ccceeeecCCCcccChhhHHHHHhcCCCCcEE
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARVP--WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 183 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~---~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 183 (410)
++|++++..+ +...+.+||+|++++|+|.++... +...|.. ++.+++. .+++.+|++++++.+.+. ++++
T Consensus 114 ~sGs~a~~~a--~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~--~~~~ 188 (447)
T 3h7f_A 114 HSGAQANAAV--LHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVD-PATHLIDMDAVRATALEF--RPKV 188 (447)
T ss_dssp SSHHHHHHHH--HHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCC-TTTCSCCHHHHHHHHHHH--CCSE
T ss_pred CCHHHHHHHH--HHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcC-cccCCcCHHHHHHHHHhc--CCeE
Confidence 7788888887 344477999999999999873221 1222333 3334432 345779999999998642 3456
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC
Q 015283 184 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 262 (410)
Q Consensus 184 ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 262 (410)
+++++|+||++. ++++|.++|++||+++|+||+|. ++.+.+.... .+ . ...+++.|+||.++ |+
T Consensus 189 i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~--~~----~--~~di~~~s~sK~l~--G~ 253 (447)
T 3h7f_A 189 IIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS--PV----P--HADVVSTTVHKTLG--GG 253 (447)
T ss_dssp EEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC--ST----T--TCSEEEEESSGGGC--CC
T ss_pred EEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC--CC----C--CCcEEEecCCcCCC--CC
Confidence 666889999987 78899999999999999999964 2222111010 00 1 23477999999874 89
Q ss_pred CcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 263 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 263 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
|.||++. ++++++.+...... ...++++...+.++...+... . .+.+++.++++.++++++.+.|. +.
T Consensus 254 ~gG~i~~---~~~~~~~l~~~~~~---~~~~~~~~~~~~a~~~a~~~~-~----~~~~~~~~~~~~~~~~~l~~~L~-~~ 321 (447)
T 3h7f_A 254 RSGLIVG---KQQYAKAINSAVFP---GQQGGPLMHVIAGKAVALKIA-A----TPEFADRQRRTLSGARIIADRLM-AP 321 (447)
T ss_dssp SCEEEEE---CGGGHHHHHHHHTT---TTCSSCCHHHHHHHHHHHHHT-T----SHHHHHHHHHHHHHHHHHHHHHT-SH
T ss_pred CeEEEEE---CHHHHHHHhhhcCC---cccCCccHHHHHHHHHHHHHh-h----CHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 9999755 77766665443221 122233332222222222110 0 11245778888889999999998 77
Q ss_pred -----CCCCCccccc-CCcceeeecC-----CCHHHHHHhhhcCcEEEc----CC---------C-eEEecC-----CCc
Q 015283 343 -----KSGKDWSFIL-RQIGMFSFTG-----LNKAQSDNMTNKWHVYMT----KD---------G-RISLAG-----LSL 392 (410)
Q Consensus 343 -----g~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~----~~---------g-Ris~~~-----~~~ 392 (410)
|+ .... +..++++|+. ++.+.+.+++++.||.+. |+ + ||+... +++
T Consensus 322 ~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~ 397 (447)
T 3h7f_A 322 DVAKAGV----SVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGD 397 (447)
T ss_dssp HHHHTTC----EEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCH
T ss_pred cccCCCe----EEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCH
Confidence 63 4332 3345565553 356777788887899988 43 1 887542 578
Q ss_pred ccHHHHHHHHHHHhhh
Q 015283 393 AKCEYLADAIIDSYHN 408 (410)
Q Consensus 393 ~~i~~~~~~l~~~l~~ 408 (410)
++++++++.|++++..
T Consensus 398 eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 398 TEFTEVADIIATALAT 413 (447)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998864
No 181
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.91 E-value=1.6e-23 Score=199.91 Aligned_cols=307 Identities=14% Similarity=0.047 Sum_probs=193.4
Q ss_pred cccccHHHHHHHHHhhccCCCccCcCCcc--cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hC
Q 015283 50 QPYVLDVVKKAENLMLERGENKEYLPIEG--LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YF 126 (410)
Q Consensus 50 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g--~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~ 126 (410)
.|.+++.+++++.+.+.. .|.+..| ..++|+++++++.. +++++ ++||++++.++. ... +.
T Consensus 7 ~p~~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~~~~--~~l~~~ 70 (394)
T 1o69_A 7 PPHMGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSKS--------ENALA--LNSATAALHLAL--RVAGVK 70 (394)
T ss_dssp -----CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHCC--------SEEEE--ESCHHHHHHHHH--HHTTCC
T ss_pred CCCCCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHHH--HHcCCC
Confidence 344568888888877644 2555557 89999999999732 57888 999999999983 333 56
Q ss_pred CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 015283 127 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 206 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~ 206 (410)
+||+|+++.|+|..+...+...|++++.+++. +++.+|++.+++.+++.+.++++++++ ||||. ..++++|.
T Consensus 71 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~---~~~G~---~~~l~~i~ 142 (394)
T 1o69_A 71 QDDIVLASSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILT---HLYGN---AAKMDEIV 142 (394)
T ss_dssp TTCEEEEESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEE---CGGGC---CCCHHHHH
T ss_pred CCCEEEECCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEE---CCCCC---hhhHHHHH
Confidence 99999999999999999999999999999883 567899999999987532134555543 48996 56788888
Q ss_pred HHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHH
Q 015283 207 DVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 285 (410)
Q Consensus 207 ~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 285 (410)
++|+++|+++|+|++|. ++.+.+ .. . ....+ +.+.|+||..+++|.|+||+ +++++++++++.....
T Consensus 143 ~l~~~~~~~li~Dea~~~g~~~~~--~~---~---~~~~~--~~~~s~s~~K~l~~~~~G~~--~~~~~~l~~~l~~~~~ 210 (394)
T 1o69_A 143 EICKENDIVLIEDAAEALGSFYKN--KA---L---GTFGE--FGVYSYNGNKIITTSGGGML--IGKNKEKIEKARFYST 210 (394)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETT--EE---T---TSSSS--EEEEECCTTSSSCCSSCEEE--EESCHHHHHHHHHHTB
T ss_pred HHHHHcCCEEEEECcCcccceeCC--cc---c---ccccC--cEEEEEeCCccCCCCCceEE--EECCHHHHHHHHHHHH
Confidence 88999999999999988 444321 10 0 01112 34455543334456789998 4445676666554311
Q ss_pred hhccC--ccc--------CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC--
Q 015283 286 RLARP--MYS--------NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-- 353 (410)
Q Consensus 286 ~~~~~--~~~--------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-- 353 (410)
..... .+. ..+.+...++...++ .+++..++.+++++++.+.|+ ++ + ++..+
T Consensus 211 ~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~----------~l~~~~~~~~~~~~~l~~~L~-~~-~----~~~~~~~ 274 (394)
T 1o69_A 211 QARENCLHYEHLDYGYNYRLSNVLGAIGVAQME----------VLEQRVLKKREIYEWYKEFLG-EY-F----SFLDELE 274 (394)
T ss_dssp TCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHT----------THHHHHHHHHHHHHHHHHHHT-TT-E----ECCCCCT
T ss_pred hccccCccccccccCcccCcCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhc-cc-c----cccCCCC
Confidence 11000 000 022222222222222 124566778888888888887 64 2 22221
Q ss_pred --Ccce-eeec--C-----------------------CCHHHHHHhhhcCcEEEcCCC----------------------
Q 015283 354 --QIGM-FSFT--G-----------------------LNKAQSDNMTNKWHVYMTKDG---------------------- 383 (410)
Q Consensus 354 --~~~~-~~~~--~-----------------------~~~~~~~~ll~~~gi~v~~~g---------------------- 383 (410)
..++ +.++ + .+.+.+.+.|.++||.+.++.
T Consensus 275 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~ 354 (394)
T 1o69_A 275 NSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSEL 354 (394)
T ss_dssp TEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHH
T ss_pred CCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHH
Confidence 1222 1222 2 123334444455799988761
Q ss_pred -------eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 384 -------RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 384 -------Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
|.+....|++|++++++.|++++..
T Consensus 355 ~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 355 FFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp HHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred HhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 1122225899999999999998753
No 182
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.91 E-value=4.2e-24 Score=202.44 Aligned_cols=305 Identities=14% Similarity=0.059 Sum_probs=199.0
Q ss_pred cccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCE
Q 015283 52 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK 130 (410)
Q Consensus 52 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~ 130 (410)
.+++.+.+++.+.+... .|.+..+..++|+++++++.. +++++ ++|||+|+..+ +... +.+||+
T Consensus 14 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~sgt~al~~~--l~~l~~~~gd~ 78 (373)
T 3frk_A 14 EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCNV--------NYCIG--CGNGLDALHLI--LKGYDIGFGDE 78 (373)
T ss_dssp HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHTS--------SEEEE--ESCHHHHHHHH--HHHTTCCTTCE
T ss_pred CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHcCCCCcCE
Confidence 34688888888777553 366778899999999999733 36777 89999999987 3344 569999
Q ss_pred EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 015283 131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 210 (410)
Q Consensus 131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~ 210 (410)
|+++.|+|..+...++..|++++.++.. .+++.+|++++++.+++ ++++++ |+||||... ++++|.++|+
T Consensus 79 Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~l~~---~~~~v~---~~n~~G~~~---~l~~i~~l~~ 148 (373)
T 3frk_A 79 VIVPSNTFIATALAVSYTGAKPIFVEPD-IRTYNIDPSLIESAITE---KTKAII---AVHLYGQPA---DMDEIKRIAK 148 (373)
T ss_dssp EEEETTSCTHHHHHHHHHSCEEEEECEE-TTTTEECGGGTGGGCCT---TEEEEE---EECCTTCCC---CHHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecc-ccccCcCHHHHHHhcCC---CCeEEE---EECCCcCcc---cHHHHHHHHH
Confidence 9999999999999999999999999984 35688999999988865 666666 789999954 4667888899
Q ss_pred HcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccc--ccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283 211 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 288 (410)
Q Consensus 211 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~ 288 (410)
++|+++|+|++|..... .+...+. .. .++.+.||| |.++.+|. .|++ +++++++.+++........
T Consensus 149 ~~~~~li~D~a~~~g~~--~~~~~~~------~~-~d~~~~S~~~~K~l~~~g~-gg~~--~~~~~~~~~~~~~~~~~g~ 216 (373)
T 3frk_A 149 KYNLKLIEDAAQAHGSL--YKGMKVG------SL-GDAAGFSFYPAKNLGSLGD-GGAV--VTNDKDLAEKIKALSNYGS 216 (373)
T ss_dssp HHTCEEEEECTTCTTCE--ETTEETT------SS-SSEEEEECCTTSSSCCSSS-CEEE--EESCHHHHHHHHHHHBTTC
T ss_pred HcCCEEEEECCcccCCE--ECCEecc------cc-ccEEEEeCcCCCccCccce-eEEE--EeCCHHHHHHHHHHHhcCc
Confidence 99999999999875432 1111111 11 247788877 88874354 5776 4556666555544322111
Q ss_pred c-----C---cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc-CCcce--
Q 015283 289 R-----P---MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-RQIGM-- 357 (410)
Q Consensus 289 ~-----~---~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~-- 357 (410)
. . .....+.+.+.++...+ +.+++..++.+++.+++.+.|+ +++ +.+.. +....
T Consensus 217 ~~~~~~~~~g~~~~~~~~~aa~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~-~~~----~~~~~~~~~~~~~ 281 (373)
T 3frk_A 217 EKKYHHIYKGFNSRLDELQAGFLRVKL----------KYLDKWNEERRKIAQKYIAGIN-NPN----VIIPVEADYAKHV 281 (373)
T ss_dssp SBTTBCCSCCCBCCCCHHHHHHHHHHH----------HTHHHHHHHHHHHHHHHHHHCC-CTT----EECCCCCTTEECC
T ss_pred ccCCccccccccCCCCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHhc-cCc----eEeccCCCCCcee
Confidence 0 0 00112232222222111 2234566777778888888887 665 22211 11111
Q ss_pred -eee--cCCCHHHHHHhhhcCcEEEcCC-----------------------------C--eEEecC-CCcccHHHHHHHH
Q 015283 358 -FSF--TGLNKAQSDNMTNKWHVYMTKD-----------------------------G--RISLAG-LSLAKCEYLADAI 402 (410)
Q Consensus 358 -~~~--~~~~~~~~~~ll~~~gi~v~~~-----------------------------g--Ris~~~-~~~~~i~~~~~~l 402 (410)
+.+ ...+.+.+.+.|+++||.+.++ + |+++.. +|++|++++++.|
T Consensus 282 ~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l 361 (373)
T 3frk_A 282 WYTFVIRSEKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKI 361 (373)
T ss_dssp CSSEEEEESSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHH
Confidence 111 1124555444445569988632 1 666553 5999999999999
Q ss_pred HHHhhh
Q 015283 403 IDSYHN 408 (410)
Q Consensus 403 ~~~l~~ 408 (410)
++...+
T Consensus 362 ~~~~~~ 367 (373)
T 3frk_A 362 NAWKLE 367 (373)
T ss_dssp HTCC--
T ss_pred HHHhhh
Confidence 987644
No 183
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.91 E-value=9e-23 Score=194.25 Aligned_cols=276 Identities=14% Similarity=0.072 Sum_probs=183.7
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~ 150 (410)
+.....++++.+++++.. + +.++ +++|++++..+. ...+.+||+|+++.|+|.++... ++..|.
T Consensus 57 ~~~~~~~l~~~la~~~g~-------~-~~i~--~~sG~~ai~~~~--~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 124 (389)
T 3acz_A 57 GNPTVEQFEEMVCSIEGA-------A-GSAA--FGSGMGAISSST--LAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGI 124 (389)
T ss_dssp CCHHHHHHHHHHHHHHTC-------S-EEEE--ESSHHHHHHHHH--TTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHHHHhCC-------C-eEEE--eCCHHHHHHHHH--HHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCC
Confidence 455678999999999632 2 4445 577889998873 33367999999999999987655 567898
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
+++.++. .|++.+++.+++ +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|..+...
T Consensus 125 ~~~~v~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~-- 189 (389)
T 3acz_A 125 EVDLIDT-------SDVEKVKAAWKP---NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL-- 189 (389)
T ss_dssp EEEEECT-------TCHHHHHHTCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC--
T ss_pred EEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc--
Confidence 8888875 378999888865 6788888999999999886 678888899999999999999876532
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCc-hhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~ 308 (410)
. ++ ..+.++++.|+||.++.+|.|+ ||+++ ++ ++++++...... .....+...+.++...++
T Consensus 190 --~--~~-----~~~~di~~~S~sK~~~~~~~~~~G~v~~---~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~l~ 253 (389)
T 3acz_A 190 --K--PL-----ELGADIALHSVSKYINGHGDVIGGVSSA---KTAEDIATIKFYRKD----AGSLMAPMDAFLCARGMK 253 (389)
T ss_dssp --C--GG-----GTTCSEEEEETTTTTTCSSCCCCEEEEE---SSHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHT
T ss_pred --C--cc-----ccCCeEEEECChhhccCCCCceeEEEEE---CcHHHHHHHHHHHHh----cCCCCCHHHHHHHHcCcc
Confidence 1 11 1246789999999999999998 98744 56 766666543321 112344445555555555
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC------CC-----Cccccc----CCcceeeecCC-CHHHHHHhh
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS------GK-----DWSFIL----RQIGMFSFTGL-NKAQSDNMT 372 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~------~~-----~~~~~~----~~~~~~~~~~~-~~~~~~~ll 372 (410)
.. ....++..++...+.+.++ +.+. +. .+.+.. ..++++.+ .+ ..+.+.+++
T Consensus 254 ~l----------~~r~~~~~~~~~~l~~~l~-~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~-~l~~~~~~~~~l 321 (389)
T 3acz_A 254 TL----------PIRMQIHMENGLKVAKFLE-QHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLF-EMKSFEAAKKLM 321 (389)
T ss_dssp TH----------HHHHHHHHHHHHHHHHHHH-HCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE-EESSHHHHHHHH
T ss_pred HH----------HHHHHHHHHHHHHHHHHHH-cCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEE-EECCHHHHHHHH
Confidence 32 1222333334444445444 3310 00 011111 12343332 22 255667777
Q ss_pred hcCcEEEcC---C-----------------------------C--eEEecCCCcccHHHHHHHHHHHhhh
Q 015283 373 NKWHVYMTK---D-----------------------------G--RISLAGLSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 373 ~~~gi~v~~---~-----------------------------g--Ris~~~~~~~~i~~~~~~l~~~l~~ 408 (410)
++.|+.+.+ | + |+|++. ++.+++++.|.++++.
T Consensus 322 ~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~~ 388 (389)
T 3acz_A 322 EHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALEL 388 (389)
T ss_dssp TTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHTC
T ss_pred HhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 767776544 2 2 888754 6899999999999865
No 184
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.91 E-value=1.2e-22 Score=193.28 Aligned_cols=215 Identities=14% Similarity=0.089 Sum_probs=150.7
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh----hhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~ 150 (410)
+..+..++++++++++.. ++.+++ .+|++++..+... .+.+||+|+++.|+|.+.... ++..|.
T Consensus 50 ~~~~~~~l~~~la~~~~~-------~~~i~~---~sGt~a~~~~~~~--~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 117 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEGG-------AGAVLT---NTGMSAIHLVTTV--FLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_dssp CCHHHHHHHHHHHHHHTC-------SEEEEE---SSHHHHHHHHHHH--HCCTTCEEEEETTCCHHHHHHHHHHHTTTSC
T ss_pred CCccHHHHHHHHHHHhCC-------CcEEEe---CCHHHHHHHHHHH--HhCCCCEEEEecCCcHhHHHHHHHHHHhcCC
Confidence 556788999999999743 245655 5559999988433 367999999999999874443 356788
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
+++.++. .|++.+++.+++ +++++++++|+||||.+.+ +++|.++|+++|+++|+||+|..+....
T Consensus 118 ~~~~~~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~- 183 (386)
T 1cs1_A 118 RVLFVDQ-------GDEQALRAALAE---KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN- 183 (386)
T ss_dssp EEEEECT-------TCHHHHHHHHHT---CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EEEEeCC-------CCHHHHHHhhcc---CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 8877765 278999999875 5667777999999999885 6788888999999999999998876431
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
.+ ..+.++++.|+||.++.+|.|+ ||+++ +++++++++...... .....+..++.++...++.
T Consensus 184 -----~~-----~~~~di~~~s~sK~~~~~~~~~~G~~~~--~~~~l~~~l~~~~~~----~~~~~~~~~~~~~~~~l~~ 247 (386)
T 1cs1_A 184 -----PL-----ALGADLVLHSCTKYLNGHSDVVAGVVIA--KDPDVVTELAWWANN----IGVTGGAFDSYLLLRGLRT 247 (386)
T ss_dssp -----GG-----GGTCSEEEEETTTTTTCSSCCCCEEEEE--SSHHHHHHHHHHHHH----HTCBCCHHHHHHHHHHHTT
T ss_pred -----cc-----ccCceEEEEcCcccccCCCCceeEEEEe--CcHHHHHHHHHHHHh----cCCCCCHHHHHHHHhcccH
Confidence 11 1246789999999999899987 88743 344766666543321 1123445554544444432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
+....+...++.+.+.+.++ ++
T Consensus 248 ----------~~~~~~~~~~~~~~l~~~l~-~~ 269 (386)
T 1cs1_A 248 ----------LVPRMELAQRNAQAIVKYLQ-TQ 269 (386)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHT-TC
T ss_pred ----------HHHHHHHHHHHHHHHHHHHh-cC
Confidence 12334455566666667666 54
No 185
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.91 E-value=1.8e-23 Score=201.45 Aligned_cols=323 Identities=15% Similarity=0.145 Sum_probs=185.1
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc-----CCccc----HHH-HHHHHHHhcCCCCCcccCCceE
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-----PIEGL----AAF-NKVTAELLFGADNSVLKEQRVA 104 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-----~~~g~----~~l-r~aia~~~~~~~~~~~~~~~i~ 104 (410)
+.++|..+.. + .++.+.+++.+.+.......|+ +.... .++ ++.+++++... . ..+
T Consensus 33 ~~i~l~~~~~------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~-~~v 98 (425)
T 3ecd_A 33 SQVELIASEN------I-VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAG------H-ANV 98 (425)
T ss_dssp HSEECCTTCC------C-CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCS------E-EEC
T ss_pred cceeeecccC------C-CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCC------C-cee
Confidence 4577765543 2 2799999998877432111221 11111 111 23344443211 2 223
Q ss_pred EEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcc---hhhhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCCC
Q 015283 105 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN---HKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGG 180 (410)
Q Consensus 105 ~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~ 180 (410)
+ ++||++++..+.. ..+.+||+|++++|+|.. +.......|..+..+++. +.+++.+|++.+++.+.+ ++
T Consensus 99 ~--~~~Gs~a~~~al~--~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~--~~ 172 (425)
T 3ecd_A 99 Q--PHSGAQANGAVML--ALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQ--HK 172 (425)
T ss_dssp C--CSSHHHHHHHHHH--HHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHH--HC
T ss_pred e--cCchHHHHHHHHH--HccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhh--cC
Confidence 4 6889999988743 347799999999999987 222222455544444332 234578999999999974 24
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc
Q 015283 181 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 259 (410)
Q Consensus 181 ~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 259 (410)
++++++++|+||+ ..++++|.++|++||++||+||+|. ++.+.+.... . ... .++++.|+||.+
T Consensus 173 ~~~v~~~~~~~~~-----~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~--~----~~~--~di~~~s~sK~l-- 237 (425)
T 3ecd_A 173 PSLIIAGFSAYPR-----KLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHAN--P----VEH--AHVVTSTTHKTL-- 237 (425)
T ss_dssp CSEEEEECSCCCS-----CCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCC--G----GGT--CSEEEEESSGGG--
T ss_pred CcEEEEccccCCC-----cCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccC--c----hhc--CcEEEecCCccc--
Confidence 5566667899975 3467899999999999999999953 2222111000 1 111 348899999987
Q ss_pred cCCCcceEEEEeCCchhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015283 260 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 338 (410)
Q Consensus 260 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 338 (410)
+|+|+||++ ++++++.+.+... ....+. +++...+.++...+... ..+++++.+++++++++++.+.|
T Consensus 238 ~g~~~g~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~l~~~L 306 (425)
T 3ecd_A 238 RGPRGGFVL--TNDEEIAKKINSA----VFPGLQGGPLMHVIAGKAVAFGEA-----LTDDFKTYIDRVLANAQALGDVL 306 (425)
T ss_dssp CCCSCEEEE--ESCHHHHHHHHHH----HC-----CCCHHHHHHHHHHHHHH-----TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEE--eCCHHHHHHHHhh----hCccccCCccHHHHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHH
Confidence 678999984 4445644444332 222111 33332222222221110 11334677888889999999999
Q ss_pred hhccCCCCCcccccC-CcceeeecCC-----CHHHHHHhhhcCcEEEc----CC--------C--eEEecC-----CCcc
Q 015283 339 SAKDKSGKDWSFILR-QIGMFSFTGL-----NKAQSDNMTNKWHVYMT----KD--------G--RISLAG-----LSLA 393 (410)
Q Consensus 339 ~~~~g~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~ll~~~gi~v~----~~--------g--Ris~~~-----~~~~ 393 (410)
. +.| +.+..+ ..++++|+.+ +.+.+.+.++++||.+. |+ + |+++.. .+++
T Consensus 307 ~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e 381 (425)
T 3ecd_A 307 K-AGG----VDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAA 381 (425)
T ss_dssp H-HTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHH
T ss_pred H-hCC----CeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHH
Confidence 8 776 344433 3455666533 45666666677899998 54 1 776332 2479
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
+++++++.|++++++
T Consensus 382 ~i~~~~~~l~~~l~~ 396 (425)
T 3ecd_A 382 EFREVGRLILEVFEA 396 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998865
No 186
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.91 E-value=5.2e-24 Score=206.97 Aligned_cols=322 Identities=13% Similarity=0.049 Sum_probs=209.9
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC---CceEEEecCChhhHHHHHHHHHHH-h---
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE---QRVATVQGLSGTGSLRLAAALIER-Y--- 125 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~---~~i~~~~t~ggt~a~~~~~~~~~~-~--- 125 (410)
.++.+.+++.++++... ..|....+..++++++++++.+.+|.+.+. ..+++ |+|||+++.++...+.. +
T Consensus 54 ~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~--t~ggtea~~~al~a~~~~~~~~ 130 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN--TIGSSEACMLGGMAMKWRWRKR 130 (452)
T ss_dssp CCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEE--eCCHHHHHHHHHHHHHHHHHHH
Confidence 35788999888875533 445555677888888888777666654321 13777 99999999887443321 1
Q ss_pred --CCC-----CEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCC
Q 015283 126 --FPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 198 (410)
Q Consensus 126 --~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~ 198 (410)
.+| +.|++++ +|..+...++..|++++.+++. ++++.+|++.+++.+.+ +++++++++|+||||.+.
T Consensus 131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~tG~~~- 204 (452)
T 2dgk_A 131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR-PGQLFMDPKRMIEACDE---NTIGVVPTFGVTYTGNYE- 204 (452)
T ss_dssp HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB-TTBCSCCHHHHHHHCCT---TEEEEECBBSCTTTCBBC-
T ss_pred HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC-CCCCeECHHHHHHHHhh---CCEEEEEEcCCcCCcccC-
Confidence 144 5999999 9999999999999999999984 24688999999999975 678888899999999964
Q ss_pred HHHHHHHHHHHHHc------CCcccccccCCCCCC---CCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 199 PEQWEKIADVIQEK------NHIPFFDVAYQGFAS---GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 199 ~~~l~~i~~~~~~~------~~~li~Deay~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
++++|+++|+++ |+++++|++|.++.. .+ .. .+. ......+.+..|.+| ++++|+++||++
T Consensus 205 --~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~-~~~----~~~~~~d~~~~~~hK-~~~~~~~~G~~~- 274 (452)
T 2dgk_A 205 --FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP-DI-VWD----FRLPRVKSISASGHK-FGLAPLGCGWVI- 274 (452)
T ss_dssp --CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT-TC-CCS----TTSTTEEEEEEETTT-TTCCCSSCEEEE-
T ss_pred --CHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCc-cc-hhh----cCCCCCcEEEECccc-ccCCCCCeEEEE-
Confidence 566777789985 999999999987642 10 00 011 111234567788899 556889999984
Q ss_pred EeCCchhH-HHHHHHHHhhccC------cccCC---ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 270 VCSSSDLA-ARVKSQLKRLARP------MYSNP---PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 270 ~~~~~~~~-~~~~~~~~~~~~~------~~~~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+++++.. +.+.. ...+... ..... ...++.++...+. .+.+++..+++.++++++.+.|+
T Consensus 275 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg--------~~g~~~~~~~~~~~a~~l~~~L~ 344 (452)
T 2dgk_A 275 -WRDEEALPQELVF-NVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG--------REGYTKVQNASYQVAAYLADEIA 344 (452)
T ss_dssp -ESSGGGSCGGGCE-EECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -EcCHHHHHHHhcc-CccccCCCCCCcccCCCChhHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444322 22100 0001000 00011 1222333332221 23456778888999999999998
Q ss_pred hccCCCCCcccccC-----Ccceeee--cC-----CC-HHHHHHhhhcCcEEEc----CC---C----eEEecC-CCccc
Q 015283 340 AKDKSGKDWSFILR-----QIGMFSF--TG-----LN-KAQSDNMTNKWHVYMT----KD---G----RISLAG-LSLAK 394 (410)
Q Consensus 340 ~~~g~~~~~~~~~~-----~~~~~~~--~~-----~~-~~~~~~ll~~~gi~v~----~~---g----Ris~~~-~~~~~ 394 (410)
+++. +++..+ ..+++.| .+ ++ .++.++|.+ .||.+. |. + ||++.. .|+++
T Consensus 345 -~~~~---~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~ 419 (452)
T 2dgk_A 345 -KLGP---YEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRL-RGWQVPAFTLGGEATDIVVMRIMCRRGFEMDF 419 (452)
T ss_dssp -TTSS---EEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHH-TTCBCCEEECSTTCTTCEEEEEECCTTCCHHH
T ss_pred -hCCC---eEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHh-cCCeeeeeeCCcccCCeEEEEEEecCCCCHHH
Confidence 7752 344332 3333333 12 23 445566655 588532 32 2 999875 47899
Q ss_pred HHHHHHHHHHHhhh
Q 015283 395 CEYLADAIIDSYHN 408 (410)
Q Consensus 395 i~~~~~~l~~~l~~ 408 (410)
++++++.|+++++.
T Consensus 420 id~li~~l~~~~~~ 433 (452)
T 2dgk_A 420 AELLLEDYKASLKY 433 (452)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988754
No 187
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.91 E-value=5.1e-24 Score=204.96 Aligned_cols=315 Identities=15% Similarity=0.153 Sum_probs=183.4
Q ss_pred ccHHHHHHHHHhhccCCCccC------cCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhC
Q 015283 53 VLDVVKKAENLMLERGENKEY------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 126 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~ 126 (410)
.+|.+.+++.+.+.......| ......+.+++...+++....+. ++++|++ .+|++++..+. ...+.
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~v~~---~sGs~a~~~a~--~~~~~ 114 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--DYANVQP---HSGSQANFAVY--TALLQ 114 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTC--SEEECCC---SSHHHHHHHHH--HHHCC
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCC--CCceeEe---cCcHHHHHHHH--HHhcC
Confidence 379999999887733221122 22222333343222332222222 2455655 55688888873 44477
Q ss_pred CCCEEEEcCCCCcchh---hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 015283 127 PGAKVLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 203 (410)
Q Consensus 127 ~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~ 203 (410)
+||+|++++|+|..+. ..+...|..+..+++..++++.+|++.+++.+.+. +++++++++|+||+ .. +++
T Consensus 115 ~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~~~~--~~---~l~ 187 (420)
T 3gbx_A 115 PGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH--KPKMIIGGFSAYSG--VV---DWA 187 (420)
T ss_dssp TTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH--CCSEEEECCTTCCS--CC---CHH
T ss_pred CCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc--CCeEEEEecCccCC--cc---CHH
Confidence 9999999999998743 22223343444444322456779999999999762 35666777899875 33 478
Q ss_pred HHHHHHHHcCCcccccccCCCC-CCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc---hhHHH
Q 015283 204 KIADVIQEKNHIPFFDVAYQGF-ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS---DLAAR 279 (410)
Q Consensus 204 ~i~~~~~~~~~~li~Deay~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~---~~~~~ 279 (410)
+|.++|++||+++|+||+|... ...+. ... .....+++++|+||.++ |.+.||++. ++ ++.+.
T Consensus 188 ~l~~l~~~~~~~li~De~~~~~~~~~~~---~~~-----~~~~~di~~~s~sK~~~--g~~gg~~~~---~~~~~~~~~~ 254 (420)
T 3gbx_A 188 KMREIADSIGAYLFVDMAHVAGLIAAGV---YPN-----PVPHAHVVTTTTHKTLA--GPRGGLILA---KGGDEELYKK 254 (420)
T ss_dssp HHHHHHHHTTCEEEEECTTTHHHHHTTS---SCC-----STTTSSEEEEESSGGGC--SCSCEEEEE---SSCCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCcchhceeccc---CCc-----ccccCCEEEeecccCCC--CCCceEEEE---cCCcHHHHHH
Confidence 8999999999999999996422 21100 000 01124588999999985 555688744 54 54444
Q ss_pred HHHHHHhhccCc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-Ccce
Q 015283 280 VKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGM 357 (410)
Q Consensus 280 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-~~~~ 357 (410)
+.. ..... ..+++...+.++...+... ..+++++.+++++++++++.+.|. +.| +.+..+ ..++
T Consensus 255 ~~~----~~~~~~~~~~~~~~~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~ 320 (420)
T 3gbx_A 255 LNS----AVFPSAQGGPLMHVIAGKAVALKEA-----MEPEFKVYQQQVAKNAKAMVEVFL-NRG----YKVVSGGTENH 320 (420)
T ss_dssp HHH----HHC----CCCCHHHHHHHHHHHHHT-----TSHHHHHHHHHHHHHHHHHHHHHH-HTT----CEEGGGSCSSS
T ss_pred hhh----hcCCCCCCCcchhHHHHHHHHHHHH-----HhHhHHHHHHHHHHHHHHHHHHHH-hcC----CeeccCCCCCe
Confidence 332 22221 2233333323322222110 012346778888999999999998 776 344432 3455
Q ss_pred eeecC-----CCHHHHHHhhhcCcEEEcC-------C------C-eEEecC-----CCcccHHHHHHHHHHHhhh
Q 015283 358 FSFTG-----LNKAQSDNMTNKWHVYMTK-------D------G-RISLAG-----LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 358 ~~~~~-----~~~~~~~~ll~~~gi~v~~-------~------g-Ris~~~-----~~~~~i~~~~~~l~~~l~~ 408 (410)
+.|+. .+.+.+.++++++||.+.+ + + ||+++. .++++++++++.|++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 321 LFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp EEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 66553 3556666666778999887 2 1 888753 3578999999999998865
No 188
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.91 E-value=7.7e-23 Score=195.42 Aligned_cols=248 Identities=16% Similarity=0.099 Sum_probs=156.0
Q ss_pred eeeeeeecCCCcccccHHHHHHHHHhhccCCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHH
Q 015283 39 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 116 (410)
Q Consensus 39 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~ 116 (410)
.+.+.| +....+++.+.+.+++...........|. +.....++++.+++++.. + +.++ +.+|++++.
T Consensus 26 ~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~-------~-~~i~--~~sG~~a~~ 94 (398)
T 1gc0_A 26 GALVPP-VYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGG-------E-AGLA--LASGMGAIT 94 (398)
T ss_dssp TBSSCC-BCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTC-------S-EEEE--ESSHHHHHH
T ss_pred CCcCCC-ccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCC-------C-cEEE--ECCHHHHHH
Confidence 445555 44455555677766654221111112232 556778999999999632 2 3444 577789999
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCC
Q 015283 117 LAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 192 (410)
Q Consensus 117 ~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NP 192 (410)
.++ ...+.+||+|+++.|+|.++...+ ...|.+++.++. .|++.+++.+++ +++++++++|+||
T Consensus 95 ~~l--~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~---~~~~v~~~~~~np 162 (398)
T 1gc0_A 95 STL--WTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALEAAMTP---ATRVIYFESPANP 162 (398)
T ss_dssp HHH--HHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-------TCHHHHHHHCCT---TEEEEEEESSCTT
T ss_pred HHH--HHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCC
Confidence 884 333679999999999999887665 567887777765 278999998875 6788888999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEe
Q 015283 193 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVC 271 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~ 271 (410)
||.+.+ +++|.++|+++|+++|+|++|..+... . .+ ..+.++++.|+||.++.+|+|+ ||+++
T Consensus 163 tG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~---~---~~-----~~~~d~~~~S~sK~~~~~~~~~~G~l~~-- 226 (398)
T 1gc0_A 163 NMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ---R---PL-----ELGADLVVHSATKYLSGHGDITAGIVVG-- 226 (398)
T ss_dssp TCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC---C---GG-----GGTCSEEEEETTTTTTCSSSCCCEEEEE--
T ss_pred Cccccc---HHHHHHHHHHcCCEEEEECCCcccccC---C---ch-----hhCceEEEECCccccCCCCCCeEEEEEE--
Confidence 999875 778888899999999999998755432 0 11 1246789999999999999998 88744
Q ss_pred CCchhHH-HHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 272 SSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 272 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+++.++ .+..... .. .....+...+.++...++.. ....++..++.+.+.+.|+
T Consensus 227 -~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~l~~~L~ 281 (398)
T 1gc0_A 227 -SQALVDRIRLQGLK-DM--TGAVLSPHDAALLMRGIKTL----------NLRMDRHCANAQVLAEFLA 281 (398)
T ss_dssp -CHHHHHHHHHTHHH-HH--TCCCCCHHHHHHHHHHHTTH----------HHHHHHHHHHHHHHHHHHH
T ss_pred -ChHHHHHHHHHHhh-cc--CCCCCCHHHHHHHHhccchH----------HHHHHHHHHHHHHHHHHHh
Confidence 655444 3332221 10 11234455555555555432 2334445556666666665
No 189
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.91 E-value=6e-23 Score=196.19 Aligned_cols=195 Identities=12% Similarity=0.055 Sum_probs=139.4
Q ss_pred ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhh
Q 015283 71 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFN 146 (410)
Q Consensus 71 ~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~ 146 (410)
.+| +..+..++++++++++.. .+.+++ .+|++++..+. . .+.+||+|++++|+|.+... .++
T Consensus 62 ~r~-~~p~~~~l~~~la~~~g~-------~~~i~~---~sG~~ai~~~~--~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~ 127 (403)
T 3cog_A 62 SRS-GNPTRNCLEKAVAALDGA-------KYCLAF---ASGLAATVTIT--H-LLKAGDQIICMDDVYGGTNRYFRQVAS 127 (403)
T ss_dssp -----CHHHHHHHHHHHHHHTC-------SEEEEE---SCHHHHHHHHH--T-TSCTTCEEEEESSCCHHHHHHHHHTGG
T ss_pred cCC-CCchHHHHHHHHHHHhCC-------CcEEEE---CCHHHHHHHHH--H-HhCCCCEEEEeCCCcchHHHHHHHHHH
Confidence 345 456788999999999743 245665 55678888873 3 46799999999999987443 345
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcC-CcccccccCCCC
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-HIPFFDVAYQGF 225 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~-~~li~Deay~~~ 225 (410)
..|.+++.++.. |++.+++.+++ +++++++++|+||||.+++ +++|+++|+++| +++|+|++|..+
T Consensus 128 ~~G~~v~~v~~~-------d~~~l~~~i~~---~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~ 194 (403)
T 3cog_A 128 EFGLKISFVDCS-------KIKLLEAAITP---ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSP 194 (403)
T ss_dssp GGTCEEEEECTT-------SHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCT
T ss_pred HcCCEEEEECCC-------CHHHHHHhcCc---CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCccc
Confidence 778888888762 78999988874 7788888999999999886 778888899999 999999999887
Q ss_pred CCCCCCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHH
Q 015283 226 ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA 304 (410)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 304 (410)
.+.. ++ . .+.+++++|+||.++.+| .|+||+ +++++++++++..... ......+...+.++.
T Consensus 195 ~~~~------~~----~-~~~div~~S~sK~~~g~~~~~~G~v--~~~~~~l~~~l~~~~~----~~g~~~~~~~~~~~~ 257 (403)
T 3cog_A 195 YFQR------PL----A-LGADISMYSATKYMNGHSDVVMGLV--SVNCESLHNRLRFLQN----SLGAVPSPIDCYLCN 257 (403)
T ss_dssp TTCC------TT----T-TTCSEEEEETTTTTTCSSCCCCEEE--EECCHHHHHHHHHHHH----HHCCCCCHHHHHHHH
T ss_pred ccCC------cc----c-cCCeEEEEcChhhccCCCCCeEEEE--EECcHHHHHHHHHHHH----hcCCCCCHHHHHHHH
Confidence 6421 11 1 246799999999998766 478997 4445676666554332 112234555555555
Q ss_pred HHhCC
Q 015283 305 NVVGN 309 (410)
Q Consensus 305 ~~l~~ 309 (410)
..++.
T Consensus 258 ~~l~~ 262 (403)
T 3cog_A 258 RGLKT 262 (403)
T ss_dssp HHHTT
T ss_pred hhhhH
Confidence 56654
No 190
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.91 E-value=2.1e-23 Score=194.28 Aligned_cols=183 Identities=16% Similarity=0.092 Sum_probs=132.2
Q ss_pred HHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCcccee
Q 015283 81 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYR 156 (410)
Q Consensus 81 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~ 156 (410)
++++.+++++.. ++.+++ .+|++++..+.. ..+.+||+|++++|+|.++...+ +..|.+++.++
T Consensus 2 ~l~~~la~~~g~-------~~~i~~---~sG~~a~~~~~~--~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 69 (331)
T 1pff_A 2 ALEGKIAKLEHA-------EACAAT---ASGMGAIAASVW--TFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFID 69 (331)
T ss_dssp HHHHHHHHHHTC-------SEEEEE---SSHHHHHHHHHH--HHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred hHHHHHHHHhCC-------CeEEEe---CChHHHHHHHHH--HhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeC
Confidence 689999999632 244544 666899998743 33679999999999999887665 35788888776
Q ss_pred eecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH-cCCcccccccCCCCCCCCCCCchh
Q 015283 157 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASGSLDNDAS 235 (410)
Q Consensus 157 ~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Deay~~~~~~~~~~~~~ 235 (410)
. .|++.+++.+++ +++++++++|+||||.+++ +++|.++|++ +|+++|+|++|..+... .
T Consensus 70 ~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~---~--- 130 (331)
T 1pff_A 70 M-------AVPGNIEKHLKP---NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT---N--- 130 (331)
T ss_dssp T-------TSTTHHHHTCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC---C---
T ss_pred C-------CCHHHHHHhhcC---CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC---C---
Confidence 5 378888888864 6788888999999999886 7788888999 99999999998754321 0
Q ss_pred HhHHHhhcCCcEEEEecccccccccCCC-cceEEEEeCCc-hhHHHHHHHHHhhccC-cccCCChhHHHHHHHH
Q 015283 236 SVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSS-DLAARVKSQLKRLARP-MYSNPPVHGARIVANV 306 (410)
Q Consensus 236 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r-~G~l~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~ 306 (410)
++ ..+.++++.|+||.++.+|.| +||+++ ++ +++++ +...... .....+...+.++...
T Consensus 131 ~~-----~~~~d~~~~s~~K~~~~~~~r~~G~~~~---~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
T 1pff_A 131 PL-----DLGVDIVVHSATKYINGHTDVVAGLVCS---RADIIAKV----KSQGIKDITGAIISPHDAWLITRG 192 (331)
T ss_dssp GG-----GGTCSEEEEETTTTTSSSSSCCCEEEEE---CHHHHHHH----HHTCCCCCCCCCCCHHHHHHHHHH
T ss_pred hh-----hcCCcEEEEECccccCCCCCceEEEEEe---CcHHHHHH----HHHHHHhhcCCCCCHHHHHHHHcC
Confidence 11 224789999999999999999 789754 55 64444 4443333 2234555555444333
No 191
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.91 E-value=6.1e-23 Score=196.45 Aligned_cols=310 Identities=15% Similarity=0.166 Sum_probs=191.5
Q ss_pred cHHHHHHHHHhhccCCCccC------cCCcccHHHH----HHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH
Q 015283 54 LDVVKKAENLMLERGENKEY------LPIEGLAAFN----KVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 123 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr----~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~ 123 (410)
++.+.+++.+.+.......| .......+++ +.+++++... ++.+++ .+|++++.++...
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~------~~~i~~---~sGt~a~~~a~~~-- 104 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAE------HANVQP---HSGAQANMAVYFT-- 104 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS------EEECCC---SSHHHHHHHHHHH--
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC------ceEEEe---cCcHHHHHHHHHH--
Confidence 79999999887742211222 1112234454 5777775321 333433 5569999988443
Q ss_pred HhCCCCEEEEcCCCCcchhh-h--hhhCCC--CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCC
Q 015283 124 RYFPGAKVLISSPTWGNHKN-I--FNDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 198 (410)
Q Consensus 124 ~~~~gd~Vl~~~p~y~~~~~-~--~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~ 198 (410)
.+.+||+|++++|+|+.+.. . +...|. +++.+++. ++++.+|++.+++.+.+. +++++++ +|+|. |..
T Consensus 105 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~--~~~~v~~-~~~~~-~~~-- 177 (405)
T 2vi8_A 105 VLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVD-PETHVIDYDDVREKARLH--RPKLIVA-AAAAY-PRI-- 177 (405)
T ss_dssp HCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBC-TTTCSBCHHHHHHHHHHH--CCSEEEE-CCSSC-CSC--
T ss_pred hcCCCCEEEEecccccchhcccchhhhccceeEEEecccc-cccCCcCHHHHHHHHHhc--CCeEEEE-eCCCC-Ccc--
Confidence 37799999999999988754 1 123343 55555542 246789999999998741 3344554 34443 342
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEeccccccc-ccCCCcceEEEEeCCchhH
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLA 277 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~l~~~~~~~~~~ 277 (410)
.++++|.++|++||+++|+||+|...... .+..... .. ..+++++|+||.++ ++| ||+++ +++++
T Consensus 178 -~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~~----~~--~~di~~~s~sK~~~g~~g---G~~~~---~~~~~ 243 (405)
T 2vi8_A 178 -IDFAKFREIADEVGAYLMVDMAHIAGLVA-AGLHPNP----VP--YAHFVTTTTHKTLRGPRG---GMILC---QEQFA 243 (405)
T ss_dssp -CCHHHHHHHHHHHTCEEEEECTTTHHHHH-TTSSCCS----TT--TCSEEEEESSSTTCCCSC---EEEEE---CHHHH
T ss_pred -CCHHHHHHHHHHcCCEEEEEccccccccc-cCcCCCc----cc--cCCEEEEeccccCCCCCC---eEEEE---cHHHH
Confidence 34788899999999999999998732111 0111111 11 23488999999997 555 99754 67766
Q ss_pred HHHHHHHHhhccCcccCCChhHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-Cc
Q 015283 278 ARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QI 355 (410)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~-~~ 355 (410)
+.+..... ....+.+...+.++ ...++... .+.+++.+++++++++++.+.|+ ++| +.+..+ ..
T Consensus 244 ~~l~~~~~----~~~~~~~~~~~~aa~~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~ 309 (405)
T 2vi8_A 244 KQIDKAIF----PGIQGGPLMHVIAAKAVAFGEAL-----QDDFKAYAKRVVDNAKRLASALQ-NEG----FTLVSGGTD 309 (405)
T ss_dssp HHHHHHHT----TTTCSSCCHHHHHHHHHHHHHHH-----SHHHHHHHHHHHHHHHHHHHHHH-HTT----CEEGGGSCS
T ss_pred HHHHhhhc----ccccCCCCHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHH-hCC----CeEecCCCC
Confidence 66544321 11222222222322 23332110 12356788889999999999998 776 354443 34
Q ss_pred ceeeecCC-----CHHHHHHhhhcCcEEEcCC------------C--eEEecC-----CCcccHHHHHHHHHHHhhhc
Q 015283 356 GMFSFTGL-----NKAQSDNMTNKWHVYMTKD------------G--RISLAG-----LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 356 ~~~~~~~~-----~~~~~~~ll~~~gi~v~~~------------g--Ris~~~-----~~~~~i~~~~~~l~~~l~~~ 409 (410)
++++|+.+ +...+.+.+.++||.+.++ + ||+++. ++++++++++++|++++++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 310 NHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp SSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred ceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 66766643 3444444445579998762 2 999873 57999999999999998653
No 192
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.90 E-value=3e-22 Score=190.76 Aligned_cols=215 Identities=15% Similarity=0.079 Sum_probs=153.1
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~ 150 (410)
+.....++++.+++++.. +++++ ++||++|+..+. ...+.+||+|+++.|+|+++...+ +..|.
T Consensus 64 ~~~~~~~l~~~la~~~g~--------~~~~~--~~sGt~A~~~al--~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~ 131 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDA--------AFGRA--FSSGMAAADCAL--RAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNV 131 (392)
T ss_dssp CCHHHHHHHHHHHHHTTC--------SEEEE--ESSHHHHHHHHH--HHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTC
T ss_pred CChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHHH--HHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCc
Confidence 455678999999999532 35666 799999999884 334779999999999998776655 66788
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
++..++. .|++.+++.+.+ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|..+...
T Consensus 132 ~~~~v~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~-- 196 (392)
T 3qhx_A 132 EYTPVAL-------ADLDAVRAAIRP---TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ-- 196 (392)
T ss_dssp EEEEECT-------TCHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC--
T ss_pred EEEEeCC-------CCHHHHHHhhCC---CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 8888775 278999998875 7888888999999999765 778888899999999999998755422
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
.+. ....++++.|+||.++.+| .|+||+ +.+++++.+.+..... .....++...+.++...++.
T Consensus 197 --~~~-------~~~~di~~~S~sK~lg~~g~~~~G~v--~~~~~~~~~~l~~~~~----~~g~~~~~~~~~~~~~~l~~ 261 (392)
T 3qhx_A 197 --QPL-------SLGADVVLHSTTKYIGGHSDVVGGAL--VTNDEELDQSFAFLQN----GAGAVPGPFDAYLTMRGLKT 261 (392)
T ss_dssp --CGG-------GGTCSEEEEETTTTTTCSSCCCCEEE--EESCHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHTT
T ss_pred --ChH-------HhCCcEEEEcCccccCCCCCceEEEE--EECcHHHHHHHHHHHH----hcCCCCCHHHHHHHHhhhhH
Confidence 111 1135688999999999877 789998 4444676665544322 12234455555555555553
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
- ....++..++.+.+.+.|+ +.
T Consensus 262 l----------~~~~~~~~~~~~~l~~~L~-~~ 283 (392)
T 3qhx_A 262 L----------VLRMQRHSENAAAVAEFLA-EH 283 (392)
T ss_dssp H----------HHHHHHHHHHHHHHHHHHH-TC
T ss_pred H----------HHHHHHHHHHHHHHHHHHh-cC
Confidence 2 2334455556666666666 54
No 193
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.90 E-value=3.2e-23 Score=201.46 Aligned_cols=292 Identities=13% Similarity=0.036 Sum_probs=184.7
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh-HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG-SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~-a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
..++.+++.+++.+..|.+ ++ +++ |+|||+ ++.++...+..+.+|+.|+++++.|..+...++..|++++.++.
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~~-~~~--t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~ 205 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--VH-AIA--TPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVET 205 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CE-EEE--ESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCC--CC-EEE--eCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEE
Confidence 3445555555554444543 23 777 999995 44433222222226788999999999999999999999988876
Q ss_pred ec-CCCcccChhhHHHHH-hcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283 158 YD-PKTVGLDFEGMIADI-KAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 234 (410)
Q Consensus 158 ~~-~~~~~~d~~~l~~~i-~~~-~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 234 (410)
.+ ++++.+|++++++.+ +.. .+++++++.++|+||||.+ .++++|+++|+++|+++++|++|..+..+ ..+
T Consensus 206 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g---~~~ 279 (456)
T 2z67_A 206 VLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNY---YLE 279 (456)
T ss_dssp EEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHH---HHH
T ss_pred eccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHH---hhH
Confidence 43 456789999999999 420 1367777778999999996 45677778899999999999999877632 001
Q ss_pred hHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHH
Q 015283 235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD 314 (410)
Q Consensus 235 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 314 (410)
... ..... ..++++.|++|.++ ++.++||+ +.+++++++++ ...........+.+++.++...+.
T Consensus 280 ~~~-~~~~~-~~D~~~~s~hK~~~-~p~g~G~l--~~~~~~~~~~l----~~~~~g~~~~~~~~~~~aal~~l~------ 344 (456)
T 2z67_A 280 KLK-KAFKY-RVDAVVSSSDKNLL-TPIGGGLV--YSTDAEFIKEI----SLSYPGRASATPVVNTLVSLLSMG------ 344 (456)
T ss_dssp HHH-HHHTS-CCSEEEEEHHHHHC-CCSSCEEE--EESCHHHHHHH----HTTSCSCBCSHHHHHHHHHHHHHH------
T ss_pred HHH-HhhCC-CCCEEEEcCCCCcC-CCCCeEEE--EEcCHHHHhhc----CcCCCCCCCCCHHHHHHHHHHHHH------
Confidence 111 11111 34567889999765 56889998 44556654443 211111111122333333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc----CCCCCcccccCCcceeeecCC--C---HHHHHHhhhcCcE---EEc--
Q 015283 315 EWKAEMEMMAGRIKNVRQKLFDSLSAKD----KSGKDWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHV---YMT-- 380 (410)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~----g~~~~~~~~~~~~~~~~~~~~--~---~~~~~~ll~~~gi---~v~-- 380 (410)
.+.+++..++..++++++.+.|+ ++ | +.+..+. +++ ++.+ + .++..+|.+ .|+ .+.
T Consensus 345 --~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~g----~~v~~~~-~~v-~~~~~~~~~~~~l~~~L~~-~gi~~~rv~~~ 414 (456)
T 2z67_A 345 --SKNYLELVKNQKNSKKLLDELLN-DLSKKTG----GKFLDVE-SPI-ASCISVNSDPVEIAAKLYN-LRVTGPRGIKK 414 (456)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHH-HHHHHSS----CCBCCCC-CSS-EEEEECSSCHHHHHHHHHH-TTEESCEEECT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHH-hcccccC----CEecCCC-CeE-EEEEecccHHHHHHHHHHH-cCCCcceEEee
Confidence 23356788888999999999998 77 5 2444444 332 2222 2 355566665 464 333
Q ss_pred ------------CCC--eEEec-CCCcccHHHHHHHHHHHh
Q 015283 381 ------------KDG--RISLA-GLSLAKCEYLADAIIDSY 406 (410)
Q Consensus 381 ------------~~g--Ris~~-~~~~~~i~~~~~~l~~~l 406 (410)
+.+ |++++ ..|++++++++++|++++
T Consensus 415 ~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 415 TDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp TCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred cCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 223 88876 348999999999998765
No 194
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.90 E-value=1.8e-22 Score=193.12 Aligned_cols=214 Identities=9% Similarity=0.009 Sum_probs=146.9
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCC
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 151 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~ 151 (410)
.....++++.+++++. .+++++ +++|++|+..+ +...+.+||+|+++.|+|.++...+. ..|.+
T Consensus 80 ~p~~~~l~~~la~~~g--------~~~~~~--~~sG~~Ai~~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~ 147 (414)
T 3ndn_A 80 NPTVSVFEERLRLIEG--------APAAFA--TASGMAAVFTS--LGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQ 147 (414)
T ss_dssp CHHHHHHHHHHHHHHT--------CSEEEE--ESSHHHHHHHH--HHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred ChHHHHHHHHHHHHHC--------CCcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcE
Confidence 4456778888888752 245666 79999999887 34446799999999999999877664 48999
Q ss_pred ccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 152 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
++.++.. |++.+++.+++ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 148 ~~~v~~~-------d~~~l~~ai~~---~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~--- 211 (414)
T 3ndn_A 148 TVFVDGD-------DLSQWERALSV---PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ--- 211 (414)
T ss_dssp EEEECTT-------CHHHHHHHTSS---CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC---
T ss_pred EEEeCCC-------CHHHHHHhcCC---CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 8888762 78999998875 5677777999999999765 678888899999999999998732211
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHH-HHHHHHHhhccCcccCCChhHHHHHHHHhCC
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVANVVGN 309 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 309 (410)
. . . ....++++.|+||.++.+| +++|++++ +++.+. .+...... .....+...+.++...++.
T Consensus 212 -~--~----~-~~g~div~~S~sK~l~~~G~~~~G~vv~---~~~~~~~~l~~~~~~----~g~~~~~~~a~~~~~~l~~ 276 (414)
T 3ndn_A 212 -Q--G----F-PLGVDVVVYSGTKHIDGQGRVLGGAILG---DREYIDGPVQKLMRH----TGPAMSAFNAWVLLKGLET 276 (414)
T ss_dssp -C--C----G-GGTCSEEEEETTTTTTCSSCCCCEEEEE---CHHHHTTHHHHHHHH----HCCCCCHHHHHHHHHHGGG
T ss_pred -C--c----h-hcCCCeEeccCCccccCCCCceEEEEEE---CHHHHHHHHHHHHHH----cCCCCCHHHHHHHHHHHHH
Confidence 0 1 0 1234688999999999888 88999754 665444 44332221 1122333333333333332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 310 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
+....++..+++..+.+.|+ +.+
T Consensus 277 ----------l~~r~~~~~~~a~~l~~~L~-~~p 299 (414)
T 3ndn_A 277 ----------LAIRVQHSNASAQRIAEFLN-GHP 299 (414)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHH-TCT
T ss_pred ----------HHHHHHHHHHHHHHHHHHHh-cCC
Confidence 23344555667777777776 553
No 195
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.90 E-value=3.2e-21 Score=184.95 Aligned_cols=176 Identities=14% Similarity=0.077 Sum_probs=132.6
Q ss_pred cHHHHHHHHHhhccCCCccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEE
Q 015283 54 LDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV 131 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~V 131 (410)
++.+.+++. ... .+.|.. .....++++.+++++.. +++++ ++||++|+..+. ...+.+||+|
T Consensus 35 ~~~~~~~~~--~~~--~~~y~~~~~~~~~~l~~~la~~~g~--------~~~~~--~~~gt~a~~~al--~~l~~~gd~v 98 (412)
T 2cb1_A 35 LEEGQERFA--TGE--GYVYARQKDPTAKALEERLKALEGA--------LEAVV--LASGQAATFAAL--LALLRPGDEV 98 (412)
T ss_dssp HHHHHHHHH--HCC--SCSBTTTCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHHH--HTTCCTTCEE
T ss_pred hHHHHHHhc--ccc--CcCcCCCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHHH--HHHhCCCCEE
Confidence 455555553 112 245653 35678999999999632 36777 899999999984 3336799999
Q ss_pred EEcCCCCcchhhh----hhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 015283 132 LISSPTWGNHKNI----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 207 (410)
Q Consensus 132 l~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~ 207 (410)
+++.|+|..+... ++..|.+++.++. |++++++.+++ +++++++++|+||||.+.+ +++|++
T Consensus 99 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~---~~~~v~~~~~~n~~G~~~~---l~~i~~ 164 (412)
T 2cb1_A 99 VAAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSA---KTRAVFVETVANPALLVPD---LEALAT 164 (412)
T ss_dssp EEETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHH
T ss_pred EEeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhcc---CCeEEEEeCCCCCCccccc---HHHHHH
Confidence 9999999876554 4557888777764 47889888865 6788888999999999875 778888
Q ss_pred HHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 208 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 208 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
+|++||+++|+|++|..+... .. .. ..+.++++.|+||.++.+|.|+||+++
T Consensus 165 l~~~~~~~li~D~~~~~~~~~---~~--~~-----~~~~di~~~S~~K~~~~~~~~~G~~~~ 216 (412)
T 2cb1_A 165 LAEEAGVALVVDNTFGAAGAL---CR--PL-----AWGAHVVVESLTKWASGHGSVLGGAVL 216 (412)
T ss_dssp HHHHHTCEEEEECGGGTTTTS---CC--GG-----GGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred HHHHcCCEEEEECCCcccccc---CC--cc-----ccCCeEEEECCcccccCCCCcEEEEEE
Confidence 899999999999999876321 11 11 124688999999999989999999854
No 196
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.89 E-value=3e-22 Score=189.59 Aligned_cols=310 Identities=11% Similarity=-0.037 Sum_probs=190.3
Q ss_pred cHHHHHHHHHhhccCCCccCcC-CcccHHHHHHH-HHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHH-hCCCCE
Q 015283 54 LDVVKKAENLMLERGENKEYLP-IEGLAAFNKVT-AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK 130 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~ai-a~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~-~~~gd~ 130 (410)
++.+.+++.+.+..+. |.+ .....++++++ ++++. . .+++++ ++|||+++.++ +... +.+||+
T Consensus 15 ~~~i~~a~~~~~~~~~---~~~~~~~~~~l~~~~~a~~~g-~------~~~~v~--~~sgt~al~~a--l~~l~~~~Gd~ 80 (377)
T 3ju7_A 15 VIEYLDELKEIDASHI---YTNYGPINQRFEQTIMSGFFQ-N------RGAVTT--VANATLGLMAA--IQLKKRKKGKY 80 (377)
T ss_dssp GGGGHHHHHHHHHHTC---CSSSCHHHHHHHHHHHHHTST-T------CSEEEE--ESCHHHHHHHH--HHHHSCTTCCE
T ss_pred cHHHHHHHHHHHHcCC---cccCCHHHHHHHHHHHHHHhC-C------CCeEEE--eCCHHHHHHHH--HHHcCCCCcCE
Confidence 5778888888776644 332 34578999999 99964 1 345667 89999999987 4444 679999
Q ss_pred EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH-hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283 131 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI-KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 209 (410)
Q Consensus 131 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i-~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~ 209 (410)
|+++.|+|..+...+...|++++.+++. .+++.+|++++++.+ .. ++++++++ |+||||...+ +++|.++|
T Consensus 81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~~-~~~tk~v~---~~~~~G~~~~---~~~i~~la 152 (377)
T 3ju7_A 81 ALMPSFTFPATPLAAIWCGLEPYFIDIS-IDDWYMDKTVLWDKIEEL-KEEVAIVV---PYATFGSWMN---LEEYEELE 152 (377)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCHHHHHHHHHHH-GGGEEEEC---CBCGGGBCCC---CHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecC-CccCCcCHHHHHHHHhcC-CCCceEEE---EECCCCCccC---HHHHHHHH
Confidence 9999999999999999999999999883 357889999999988 43 11277776 7899999665 56677778
Q ss_pred HHcCCcccccccCCCCCCCCCCCchhHhHHH-hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhc
Q 015283 210 QEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 288 (410)
Q Consensus 210 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~ 288 (410)
+ +|+++|+|++|...... ... .. ....+..++..+.+|.++. | +.|++ +++++++++++........
T Consensus 153 ~-~~~~vi~D~a~a~g~~~--~~~-----~~g~~~~d~~~~S~~~~K~l~~-g-~gG~~--~~~~~~l~~~~~~~~~~g~ 220 (377)
T 3ju7_A 153 K-KGVPVVVDAAPGFGLMN--GGM-----HYGQDFSGMIIYSFHATKPFGI-G-EGGLI--YSKNEEDIQRIKRMGNFGF 220 (377)
T ss_dssp H-TTCCBEEECTTCTTCEE--TTE-----ETTTTCSSEEEEECBTTSSSCC-B-SCEEE--EESCHHHHHHHHHHTBTTB
T ss_pred h-cCCEEEEECCCccCCeE--CCE-----eccCCCCcEEEEECCCCCcCCC-C-CcEEE--EECCHHHHHHHHHHHhcCC
Confidence 9 99999999997643311 110 11 0012233333345799984 5 45665 5677776666544221110
Q ss_pred c--------CcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCcccccCCcceee
Q 015283 289 R--------PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG-KDWSFILRQIGMFS 359 (410)
Q Consensus 289 ~--------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~~~~~~~~~~ 359 (410)
. ......+.+.+.++...++ .+....++.+++++++.+.|+ +++.. ..+........++.
T Consensus 221 ~~~~~~~~~g~~~~~~~~~aa~~~~~l~----------~l~~~~~~~~~~~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~ 289 (377)
T 3ju7_A 221 DTNRECTMMGFNCKMSEYAAAIGIATMK----------KWDDKLKERTRISEWYKQLLQ-SNGLMKKGWQLQKTEAVIQQ 289 (377)
T ss_dssp CTTSCBCSSCCBCCCCHHHHHHHHHHHH----------THHHHHHHHHHHHHHHHHHHH-HTTTTTTTCBCCCCSCBCCS
T ss_pred CCCCceeeccccCCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhc-CCCCccccccCCCCCcceEE
Confidence 0 0111233333233333322 224455566666667777777 66421 00111111111211
Q ss_pred e--cCC----CHHHHHHhhhcCcEEEcCC----------------C-------------eEEec-CCCcccHHHHHHHHH
Q 015283 360 F--TGL----NKAQSDNMTNKWHVYMTKD----------------G-------------RISLA-GLSLAKCEYLADAII 403 (410)
Q Consensus 360 ~--~~~----~~~~~~~ll~~~gi~v~~~----------------g-------------Ris~~-~~~~~~i~~~~~~l~ 403 (410)
+ +.+ +.+.+.+.|+++||.+..+ + |+++. .++++|++++++.|+
T Consensus 290 ~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~ 369 (377)
T 3ju7_A 290 FMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLG 369 (377)
T ss_dssp SEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHT
T ss_pred EEEEEeCChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHH
Confidence 1 111 2566665556679987542 0 55544 368999999999998
Q ss_pred HHhhh
Q 015283 404 DSYHN 408 (410)
Q Consensus 404 ~~l~~ 408 (410)
+++..
T Consensus 370 ~~~~~ 374 (377)
T 3ju7_A 370 QKVVS 374 (377)
T ss_dssp C----
T ss_pred HHHhc
Confidence 88764
No 197
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.83 E-value=2.9e-25 Score=214.21 Aligned_cols=332 Identities=14% Similarity=0.056 Sum_probs=206.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|......|+. +|.+.+++.+++.......| +.....++.+.+++++. . .+.+.+ +++|++
T Consensus 100 ~~yiD~~~~~~~~~lGh~--~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~p-~------~~~v~~--~nSGse 167 (465)
T 2yky_A 100 HAYVNFLGEYTAGLFGHS--HPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRFP-S------IDLVRF--TNSGTE 167 (465)
Confidence 467899888763344543 58899988887755432344 44556678888887753 1 467888 899999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCC--CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 187 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~ 187 (410)
|++.+.++.+.+..+++|++.+++|.++..... ..|. .+..++. .|++.+++.+++.+++++++++.
T Consensus 168 A~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~e 240 (465)
T 2yky_A 168 ANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVE 240 (465)
Confidence 999997665555567999999999977654322 1232 2233332 37888888887433456666655
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283 188 CAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 188 ~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
+.+++||.+. +.+.+++|.++|++||+++|+||+|. +..+ ..+.... .+...-+.||||.+|. |+|+||
T Consensus 241 pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g----~~~a~~~----~gv~pDi~t~sK~lg~-G~piG~ 310 (465)
T 2yky_A 241 PMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS----GGGAQEM----LGISADLTTLGKYIGG-GMSFGA 310 (465)
Confidence 5566799655 57779999999999999999999999 6432 1111111 1112224489999995 999999
Q ss_pred EEEEeCCchhHHHHHHH-HHh-hccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 267 MNVVCSSSDLAARVKSQ-LKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 267 l~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
+++ ++++++.+... ... ....++ +.+.+++.++...|+.-+ + +...++++++.+++.+.|+ ++..
T Consensus 311 v~~---~~~i~~~l~~~~~g~~~~~~T~-~~npla~aAa~aaL~~l~------~--~~~~~~~~~~~~~l~~~L~-~~~~ 377 (465)
T 2yky_A 311 FGG---RRDLMERFDPARDGAFAHAGTF-NNNILTMSAGHAALTQIY------T--RQAASDLSASGDRFRANLN-RIAV 377 (465)
Confidence 754 77866665441 010 122222 334444454433333110 0 1344566666666666665 4421
Q ss_pred CCCcccccCCcceeeecCCC------------------HHHHHHhhhcCcEEEcCCC--eEEecCCCcccHHHHHHHHHH
Q 015283 345 GKDWSFILRQIGMFSFTGLN------------------KAQSDNMTNKWHVYMTKDG--RISLAGLSLAKCEYLADAIID 404 (410)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ll~~~gi~v~~~g--Ris~~~~~~~~i~~~~~~l~~ 404 (410)
...+....+..|.+.++.+. ..++.++++ +||++.|++ .+++. .+++++++++++|++
T Consensus 378 ~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~GV~v~p~~~~~~s~~-~t~edid~~l~~l~~ 455 (465)
T 2yky_A 378 ENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLR-KGIYLAPRGMYALSLE-IADAGRDAFAEALAD 455 (465)
Confidence 11122223344555554331 123556665 699999876 35554 499999999999999
Q ss_pred Hhhhc
Q 015283 405 SYHNV 409 (410)
Q Consensus 405 ~l~~~ 409 (410)
+++++
T Consensus 456 ~l~~~ 460 (465)
T 2yky_A 456 FIGEQ 460 (465)
Confidence 88754
No 198
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.89 E-value=9.1e-21 Score=182.40 Aligned_cols=215 Identities=12% Similarity=0.093 Sum_probs=147.0
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~ 150 (410)
+.....++++.+++++.. .+.+++ .+|++++..+ +...+.+||+|+++.|+|.++.. .++..|.
T Consensus 112 ~~~~~~~l~~~lA~l~g~-------~~~v~~---~sG~~Ai~~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 179 (445)
T 1qgn_A 112 GNPTTVVLEEKISALEGA-------ESTLLM---ASGMCASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGI 179 (445)
T ss_dssp CCHHHHHHHHHHHHHHTC-------SEEEEE---SCHHHHHHHH--HHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred CChHHHHHHHHHHHHhCC-------CcEEEe---CCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCC
Confidence 344567999999999632 234555 6667999887 33447799999999999998765 3567788
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCc-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGS-FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 229 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~-~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 229 (410)
+++.++. .|++++++.+++ ++ +++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 180 ~v~~v~~-------~d~~~l~~ai~~---~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~- 245 (445)
T 1qgn_A 180 TATVIDP-------ADVGALELALNQ---KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ- 245 (445)
T ss_dssp EEEEECS-------SCHHHHHHHHHH---SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-
T ss_pred EEEEeCC-------CCHHHHHHHhcc---CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence 8888875 178999999986 56 78888999999999876 667888899999999999998754421
Q ss_pred CCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283 230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308 (410)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~ 308 (410)
.. . ....++++.|+||.+|..| .++||+++ ++++++++..... ......+.....++...++
T Consensus 246 ---~~--~-----~~g~Div~~S~sK~~gg~gd~~~G~l~~---~~~l~~~l~~~~~----~~g~~~~~~~a~~~~~~l~ 308 (445)
T 1qgn_A 246 ---KA--L-----ALGADLVLHSATKFLGGHNDVLAGCISG---PLKLVSEIRNLHH----ILGGALNPNAAYLIIRGMK 308 (445)
T ss_dssp ---CT--T-----TTTCSEEEECTTTTTTCSSSCCCEEEEE---CHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHGG
T ss_pred ---Cc--c-----ccCCEEEEECCcccccccccceEEEEEE---CHHHHHHHHHHHH----HhCCCCCHHHHHHHHHhHH
Confidence 11 1 1235688999999998655 46899755 7777666654322 1111233333333333333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
. +....++..++++.+.+.|+ +.+
T Consensus 309 ~----------l~~r~~~~~~~a~~l~~~L~-~~p 332 (445)
T 1qgn_A 309 T----------LHLRVQQQNSTALRMAEILE-AHP 332 (445)
T ss_dssp G----------HHHHHHHHHHHHHHHHHHHH-TCT
T ss_pred H----------HHHHHHHHHHHHHHHHHHHh-cCC
Confidence 2 12333445556777777787 653
No 199
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.89 E-value=1e-22 Score=200.17 Aligned_cols=352 Identities=10% Similarity=0.017 Sum_probs=220.9
Q ss_pred HhhhcCCCCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEE
Q 015283 27 AFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 106 (410)
Q Consensus 27 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~ 106 (410)
.+.+.--+..+++..-.|++....++.++.+.+++.....+.....|.......++++++.+++.+..|.+ ..+.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~- 163 (497)
T 2qma_A 86 DVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIF- 163 (497)
T ss_dssp HHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEE-
T ss_pred HHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEE-
Confidence 33333334556666667777777777788888776544322222456544566777777666666555543 1367888
Q ss_pred ecCChhhHHHHHHHHHHH--h---------CC------CC-EEEEcCCCCcchhhhhhhCCC---CccceeeecCCCccc
Q 015283 107 QGLSGTGSLRLAAALIER--Y---------FP------GA-KVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGL 165 (410)
Q Consensus 107 ~t~ggt~a~~~~~~~~~~--~---------~~------gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~ 165 (410)
|+|||+++..+....+. + .+ || .|+++.++|.++...+...|. +++.+|+ ++++.+
T Consensus 164 -t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~--~~~~~~ 240 (497)
T 2qma_A 164 -TSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDA--NADGTM 240 (497)
T ss_dssp -ESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB--CTTSSB
T ss_pred -cCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEec--CCCCcC
Confidence 99999999988654321 2 12 46 799999999999888888776 6788887 356889
Q ss_pred ChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-
Q 015283 166 DFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA- 241 (410)
Q Consensus 166 d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~- 241 (410)
|++.|++.+.+. +.++.+++.++++||||. .+++++|+++|++||+++++|++|.++... .+ .+...
T Consensus 241 d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~---~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~---~~---~~~~~~ 311 (497)
T 2qma_A 241 DITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGA---IDDLDFIADMAVKHDMWMHVDGAYGGALIL---SS---HKSRLK 311 (497)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCC---BCCHHHHHHHHHHHTCEEEEEETTGGGGGG---ST---TGGGGT
T ss_pred CHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCC---CCCHHHHHHHHHHcCCEEEEehhhhHHHHh---Cc---chHhhc
Confidence 999999998752 112446777889999999 456778888899999999999999876642 11 11111
Q ss_pred hcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcc---cC-----------CChhHHHHHHHHh
Q 015283 242 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMY---SN-----------PPVHGARIVANVV 307 (410)
Q Consensus 242 ~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~~~~~~a~~~l 307 (410)
.....++++.|++|.++.| .++|++ +.+++..++.+... ..+..... .+ ...+.+.++...+
T Consensus 312 gi~~~D~i~~s~hK~l~~p-~~~G~l--~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l 387 (497)
T 2qma_A 312 GVERAHSISVDFHKLFYQT-ISCGAL--LVNDKSNFKFLLHH-ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV 387 (497)
T ss_dssp TGGGCSEEEEETTTTTCCC-SSCEEE--EESCGGGGGGGCC---------------------CCSCCCTHHHHHHHHHHT
T ss_pred CcccCCEEEEcchhccCCC-cceEEE--EEeCHHHHHHhcCC-chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh
Confidence 1112346778999998865 689998 44555533322110 00000000 00 0112222233333
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc-ccCCcceeeec--CC--C-----HHHHHHhhhcCcE
Q 015283 308 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFT--GL--N-----KAQSDNMTNKWHV 377 (410)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~~--~~--~-----~~~~~~ll~~~gi 377 (410)
.. +.+++..++..++++++.+.|+ ++.. +++ .++..+++.|- +. . .++...+.+ .|+
T Consensus 388 g~--------~g~~~~~~~~~~~a~~l~~~L~-~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~-~G~ 454 (497)
T 2qma_A 388 GP--------KALGDMYDHLLAQTLEVADMIR-TNDQ---FELLAEPSLSTVLFRATHETADLDELNKALRLEALT-RGI 454 (497)
T ss_dssp CH--------HHHHHHHHHHHHHHHHHHHHHH-TCTT---EEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHH-HTS
T ss_pred CH--------HHHHHHHHHHHHHHHHHHHHHh-hCCC---eEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHh-CCC
Confidence 21 2345777788889999999998 7631 444 24455544332 21 1 123345554 588
Q ss_pred EEcCC----C----eEEec--CCCcccHHHHHHHHHHHhhhc
Q 015283 378 YMTKD----G----RISLA--GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 378 ~v~~~----g----Ris~~--~~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+.++ | ||++. ..++++++++++.|+++++++
T Consensus 455 ~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 455 AVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp CBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 77542 2 99873 248999999999999998765
No 200
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.89 E-value=1.6e-22 Score=198.64 Aligned_cols=327 Identities=12% Similarity=0.059 Sum_probs=209.0
Q ss_pred ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCce-EEEecCChhhHHHHHHHHHHH-h---
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRV-ATVQGLSGTGSLRLAAALIER-Y--- 125 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i-~~~~t~ggt~a~~~~~~~~~~-~--- 125 (410)
.++++.+.+++.+.+.... ..|....+..++++.+.+++.+.+|.+.+++++ .-..++||++++.++...+.. +
T Consensus 66 ~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~ 144 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHH
Confidence 3457899999988875533 334344456778878777777766665333333 212278999999887433321 1
Q ss_pred --CCCC-----EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCC
Q 015283 126 --FPGA-----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 198 (410)
Q Consensus 126 --~~gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~ 198 (410)
.+|+ .|++++++|..+...++..|++++.+++. ++++.+|++.+++.+.+ ++.++++++|+||||.+.
T Consensus 145 ~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~tG~~~- 219 (502)
T 3hbx_A 145 RKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPQQAVDMVDE---NTICVAAILGSTLNGEFE- 219 (502)
T ss_dssp HHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCB-TTBCSCCHHHHHHHCCT---TEEEEEEEBSCTTTCCBC-
T ss_pred HHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecC-CCcCcCCHHHHHHHHhh---CCEEEEEecCCCCCCccc-
Confidence 1276 99999999999999999999999999973 34588999999999975 678888899999999965
Q ss_pred HHHHHHHHHHHHHc------CCcccccccCCCCC----CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 199 PEQWEKIADVIQEK------NHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 199 ~~~l~~i~~~~~~~------~~~li~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
++++|.++|+++ |+++++|++|.++. .+.. .+. ......+++..|.+|.++ .+.++||+
T Consensus 220 --~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~---~~~----~~~~~~D~v~~s~hK~l~-~p~g~G~~- 288 (502)
T 3hbx_A 220 --DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPEL---EWD----FRLPLVKSINVSGHKYGL-VYAGIGWV- 288 (502)
T ss_dssp --CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTC---CCS----TTSTTEEEEEEETTTTTC-CCSSCEEE-
T ss_pred --CHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccc---ccc----cCCCCceEEEECcccccC-CCCCeEEE-
Confidence 466777779988 99999999998654 1111 011 112235677788999874 56778987
Q ss_pred EEeCCchhHHHHHHHHHhhccCc-----c-cCC---ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 269 VVCSSSDLAARVKSQLKRLARPM-----Y-SNP---PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
+.++++.+.........+.... . ... ...++.++...+. .+.+.+..++..++++++.+.|+
T Consensus 289 -~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg--------~~g~~~~~~~~~~~a~~l~~~L~ 359 (502)
T 3hbx_A 289 -IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--------HEGYRNVMENCRENMIVLREGLE 359 (502)
T ss_dssp -EESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -EEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455543211100000010000 0 111 1222222222222 23346777888888889999998
Q ss_pred hccCCCCCcccccC--Ccceeeec--C---CCH-HHHHHhhhcCcEEEc----CC---C----eEEecC-CCcccHHHHH
Q 015283 340 AKDKSGKDWSFILR--QIGMFSFT--G---LNK-AQSDNMTNKWHVYMT----KD---G----RISLAG-LSLAKCEYLA 399 (410)
Q Consensus 340 ~~~g~~~~~~~~~~--~~~~~~~~--~---~~~-~~~~~ll~~~gi~v~----~~---g----Ris~~~-~~~~~i~~~~ 399 (410)
+++. +++..+ ..+++.|- + ++. ++.+.|.+ .|+.+. |. + ||++.. .++++++.++
T Consensus 360 -~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li 434 (502)
T 3hbx_A 360 -KTER---FNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRR-YGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLV 434 (502)
T ss_dssp -TTTC---EEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHT-TTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHH
T ss_pred -hCCC---EEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHh-CCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHH
Confidence 8762 344433 33333321 2 344 44555554 698753 22 2 999874 4889999999
Q ss_pred HHHHHHhhh
Q 015283 400 DAIIDSYHN 408 (410)
Q Consensus 400 ~~l~~~l~~ 408 (410)
+.|+++++.
T Consensus 435 ~~L~~~l~~ 443 (502)
T 3hbx_A 435 IDIEKVMRE 443 (502)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998865
No 201
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=3.5e-23 Score=196.51 Aligned_cols=291 Identities=12% Similarity=0.098 Sum_probs=185.0
Q ss_pred HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchh--hhhhhCCC--Cccce
Q 015283 80 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK--NIFNDARV--PWSEY 155 (410)
Q Consensus 80 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~--~~~~v 155 (410)
.++++.+++++ +. .+.+++ ++|||+++++++ +.+.+||+|++++++|.++. ..++..|. +++.+
T Consensus 38 ~~~~~~l~~~~----~~---~~~v~~--~~sgt~a~~~~~---~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 105 (379)
T 3ke3_A 38 NDLLSNLKTVY----NA---EAAVII--PGSGTYGMEAVA---RQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHH----TC---SEEEEE--ESCHHHHHHHHH---HHHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEE
T ss_pred HHHHHHHHHHh----CC---CCEEEE--cCChhHHHHHHH---HhCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEE
Confidence 35555555554 22 256777 899999999973 44679999999999987653 34455554 55666
Q ss_pred eeecC------CC-cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 156 RYYDP------KT-VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 156 ~~~~~------~~-~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
+.... .. ..+|++++++.+.+ ++++++++++++||||.+.+.+++++|.++|++||+++|+|+++. +.
T Consensus 106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~--g~- 180 (379)
T 3ke3_A 106 TAERTEDTEAPKPFAPVDIETAVAKIKE--DKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS--GC- 180 (379)
T ss_dssp ECEESSCCSSCCCEECCCHHHHHHHHHH--HTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC--TT-
T ss_pred eccccccccccCCCCCCCHHHHHHHHhh--cCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc--CC-
Confidence 65321 11 25799999999864 145566667889999999999999999999999999999999965 31
Q ss_pred CCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHH------------------HHhhccC
Q 015283 229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ------------------LKRLARP 290 (410)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~------------------~~~~~~~ 290 (410)
... .+. ..+.++++.|++|.++. +.++|++++ ++++++.+... .....+.
T Consensus 181 -~~~---~~~----~~~~d~~~~s~~K~l~~-~~g~g~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 248 (379)
T 3ke3_A 181 -VWL---DMK----ELGIDVLISAPQKGWSS-TPCAGLVML---SAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHA 248 (379)
T ss_dssp -CCC---CHH----HHTCSEEEECTTTTTCS-CCCEEEEEE---CHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCC
T ss_pred -ccc---ccc----ccCCCEEEecchhhcCC-CCceEEEEE---CHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCC
Confidence 111 111 11346788899998863 345788765 77766655320 0000011
Q ss_pred cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC---cceee-ecCCCHH
Q 015283 291 MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ---IGMFS-FTGLNKA 366 (410)
Q Consensus 291 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~---~~~~~-~~~~~~~ 366 (410)
...+++...+.++...|+. +. .+.+++.+++.+++++++.+.|+ ++|+ .+..+. .+... +..-..+
T Consensus 249 ~~~t~~~~~~~a~~aal~~--~~---~~g~~~~~~~~~~l~~~l~~~l~-~~g~----~~~~~~~~~~~~i~~~~~~~~~ 318 (379)
T 3ke3_A 249 YHATMPTDSLRQFRDAILE--AK---EIGFDILRDAQWELGNRVRKVLT-DKGI----ESVAAEGFEAPGVVVSYTERDD 318 (379)
T ss_dssp CSSCCCHHHHHHHHHHHHH--HH---HHCHHHHHHHHHHHHHHHHHHHH-HTTC----CBSBCTTCBCSSEEEEECSCHH
T ss_pred CCCCCCHHHHHHHHHHHHH--HH---HhcHHHHHHHHHHHHHHHHHHHH-HcCC----EecCCccccCceEEEEccCCcc
Confidence 1113444433333333221 10 11256888889999999999998 8874 333222 22111 1111333
Q ss_pred H-HHHhhhcCcEEEcCC----------C---eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 367 Q-SDNMTNKWHVYMTKD----------G---RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 367 ~-~~~ll~~~gi~v~~~----------g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
. ..+.+.++||.+.++ + ||++.. .|++++++++++|+++++++
T Consensus 319 ~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~ 376 (379)
T 3ke3_A 319 MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEV 376 (379)
T ss_dssp HHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHh
Confidence 3 133445579988765 3 898753 48999999999999998754
No 202
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.89 E-value=1e-21 Score=190.46 Aligned_cols=324 Identities=14% Similarity=0.168 Sum_probs=185.8
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC------CcccHHHH----HHHHHHhcCCCCCcccCCce-
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP------IEGLAAFN----KVTAELLFGADNSVLKEQRV- 103 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr----~aia~~~~~~~~~~~~~~~i- 103 (410)
..|+|..+.. ++++.|++++...+.+.....|+. ..-..+++ +.+++++... .+.+
T Consensus 55 ~~i~lias~n-------~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~------~~~~~ 121 (490)
T 2a7v_A 55 RGLELIASEN-------FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLD------PAQWG 121 (490)
T ss_dssp HSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCC------TTTEE
T ss_pred cCceEECCCC-------CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCC------cccCc
Confidence 4566765442 248999999987764433233332 11223566 5556654322 2222
Q ss_pred EEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh--------hhhhCCCCc--cceeeecCCCcccChhhHHHH
Q 015283 104 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN--------IFNDARVPW--SEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 104 ~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~v~~~~~~~~~~d~~~l~~~ 173 (410)
..+.+++|++|+..+ +.+.+.|||+|+++++.|.++.. .+...|..+ +.+++ +.+++.+|++++++.
T Consensus 122 ~~v~~~sGt~An~~a--l~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~v-d~~~~~iD~d~le~~ 198 (490)
T 2a7v_A 122 VNVQPYSGSPANLAV--YTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALT 198 (490)
T ss_dssp EECCCSSHHHHHHHH--HHHHCCSCEECCC-------------------------------CCB-CTTTCSBCHHHHHHH
T ss_pred eEEeCCchHHHHHHH--HHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccc-ccccCCcCHHHHHHH
Confidence 122256899999887 55568899999999998876432 223445433 34443 234678999999999
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEec
Q 015283 174 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQS 252 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 252 (410)
+.+. ++++++++.++||+. .++++|.++|++||+++++|+++. ++...+.... .+ . ..++++.|
T Consensus 199 l~~~--~~klIi~~~s~~~~~-----~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~--~~----~--~aDiv~~S 263 (490)
T 2a7v_A 199 ARLF--RPRLIIAGTSAYARL-----IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPS--PF----K--HADIVTTT 263 (490)
T ss_dssp HHHH--CCSEEEECCSSCCSC-----CCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCC--GG----G--TCSEEEEE
T ss_pred Hhhc--CCcEEEEcCCCCCCc-----ccHHHHHHHHHHcCCEEEEccccccccccCCcCCC--CC----C--CCCEEEEC
Confidence 8642 345667788888863 257889999999999999999954 2222111111 11 1 24588899
Q ss_pred ccccccccCCCcceEEEEeCCc--------------hhHHHHHHHHHhhccCcc-cCCChhHHHHHHHHhCChhhHHHHH
Q 015283 253 YSKNLGLYAERIGAMNVVCSSS--------------DLAARVKSQLKRLARPMY-SNPPVHGARIVANVVGNPALFDEWK 317 (410)
Q Consensus 253 ~sK~~~~~G~r~G~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~ 317 (410)
+||+++ |.|.|++++ +++ ++.+++.. ..+... ++++.....++...+.. ...
T Consensus 264 ~hK~l~--Gp~GG~i~~--~~~~~~~~~~~~~~~~~~l~~~i~~----~~~~g~qggp~~~~iaAla~Al~~-----~~~ 330 (490)
T 2a7v_A 264 THKTLR--GARSGLIFY--RKGVKAVDPKTGREIPYTFEDRINF----AVFPSLQGGPHNHAIAAVAVALKQ-----ACT 330 (490)
T ss_dssp SSGGGC--SCSCEEEEE--ECSEEEEETTTEEEEECCCHHHHHH----HHTTTTCCSCCHHHHHHHHHHHHH-----HHS
T ss_pred CcccCc--cccchheee--ccchhcccccccchhhHHHHHHHHH----HhcccCCCCchHHHHHHHHHHHHH-----Hhh
Confidence 999874 677788744 332 33344333 333322 23333322222222221 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc-CCcceeeecC-----CCHHHHHHhhhcCcEEEcC----C-----
Q 015283 318 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-RQIGMFSFTG-----LNKAQSDNMTNKWHVYMTK----D----- 382 (410)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~----~----- 382 (410)
++++++++++.++++++.+.|. +.| +.+.. ....+++|+. ++.+.+.+.|++.||.+.. +
T Consensus 331 ~~~~~~~~~~~~na~~L~~~L~-~~G----~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~ 405 (490)
T 2a7v_A 331 PMFREYSLQVLKNARAMADALL-ERG----YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAI 405 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HTT----CEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-HcC----cEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCC
Confidence 2346778888999999999999 877 34443 2234556653 3566677777888999863 2
Q ss_pred ---C-eEEec-----CCCcccHHHHHHHHHHHhh
Q 015283 383 ---G-RISLA-----GLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 383 ---g-Ris~~-----~~~~~~i~~~~~~l~~~l~ 407 (410)
+ ||+.. +.++++++++++.|.+++.
T Consensus 406 ~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 406 TPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp SCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 2 88643 2588999999999998875
No 203
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.88 E-value=4.3e-21 Score=185.60 Aligned_cols=191 Identities=14% Similarity=-0.059 Sum_probs=138.9
Q ss_pred ccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH-------Hh
Q 015283 53 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-------RY 125 (410)
Q Consensus 53 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~-------~~ 125 (410)
+.+.+.+++.+.+.. ..|.+..+..++++++++++.. +++++ +++|++++.++...+. .+
T Consensus 41 ~~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~g~--------~~~i~--~~sGt~a~~~al~~l~~~~~~~~~~ 107 (437)
T 3bb8_A 41 IGTKELQLMVEASLD---GWLTTGRFNDAFEKKLGEYLGV--------PYVLT--TTSGSSANLLALTALTSPKLGVRAL 107 (437)
T ss_dssp CCHHHHHHHHHHHHH---CCCBSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHHHHHTTCGGGGGGSC
T ss_pred CCHHHHHHHHHHHHc---CCcCCChHHHHHHHHHHHHHCC--------CcEEE--eCCHHHHHHHHHHHhhhcccccccC
Confidence 357788888777654 2355667899999999999733 24566 7889999988743221 05
Q ss_pred CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC-CCCCCCCCCCCHHHHHH
Q 015283 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG-CAHNPTGIDPTPEQWEK 204 (410)
Q Consensus 126 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~-~p~NPtG~~~~~~~l~~ 204 (410)
.+||+|+++.|+|..+...+...|++++.+++. .+++.+|++.+++.+.+ ++++++++ +++|| .++++
T Consensus 108 ~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~i~~---~~~~v~~~~~~g~~-------~~~~~ 176 (437)
T 3bb8_A 108 KPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVD-IPTYNVNASLIEAAVSD---KTKAIMIAHTLGNL-------FDLAE 176 (437)
T ss_dssp CTTCEEEECSSSCHHHHHHHHHTTCEEEECCEE-TTTTEECGGGHHHHCCT---TEEEEEEECGGGCC-------CCHHH
T ss_pred CCcCEEEECCCCcHHHHHHHHHcCCEEEEEecc-CccCCcCHHHHHHhcCC---CCeEEEEeCCCCCh-------hcHHH
Confidence 689999999999999999999999999999884 33678999999999864 56666654 34444 56888
Q ss_pred HHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHH
Q 015283 205 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 279 (410)
Q Consensus 205 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~ 279 (410)
|.++|+++|+++|+|++|...... +...+ ... ..+++.||+|..+++|.+.|+++. +++.+..
T Consensus 177 i~~l~~~~~~~li~D~a~~~g~~~--~~~~~------~~~-~d~~~~s~~~~k~l~~g~gg~~~~---~~~~~~~ 239 (437)
T 3bb8_A 177 VRRVADKYNLWLIEDCCDALGSTY--DGKMA------GTF-GDIGTVSFYPAKHITMGEGGAVFT---QSAELKS 239 (437)
T ss_dssp HHHHHHHHTCEEEEECTTCTTCEE--TTEET------TSS-SSEEEEECSTTSSSCCSSCEEEEE---SCHHHHH
T ss_pred HHHHHHHcCCEEEEECccccCceE--CCeec------ccc-cCEEEEECcCCcCCCCCCeEEEEe---CCHHHHH
Confidence 888999999999999998743321 11111 111 236778998888889999999743 5444443
No 204
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.88 E-value=3.5e-21 Score=183.34 Aligned_cols=213 Identities=15% Similarity=0.097 Sum_probs=147.6
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~ 150 (410)
+..+..++|+++++++.. . +.++ +.+|++++.++.. .+.+||+|+++.|+|.+... .++..|.
T Consensus 53 ~~~~~~~lr~~la~~~g~-------~-~~i~--~~sGt~a~~~al~---~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 119 (393)
T 1n8p_A 53 QNPNRENLERAVAALENA-------Q-YGLA--FSSGSATTATILQ---SLPQGSHAVSIGDVYGGTHRYFTKVANAHGV 119 (393)
T ss_dssp CCHHHHHHHHHHHHHTTC-------S-EEEE--ESCHHHHHHHHHH---TSCSSCEEEEESSCCHHHHHHHHHTSTTTCS
T ss_pred CChhHHHHHHHHHHHhCC-------C-cEEE--ECChHHHHHHHHH---HcCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 445678999999999632 2 3444 4667999999843 46799999999999985443 5567888
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHc----CCcccccccCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK----NHIPFFDVAYQGFA 226 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~----~~~li~Deay~~~~ 226 (410)
+++.++.. | +++++.+++ +++++++++|+||||.+.+ +++|.++|+++ |+++|+|++|..+.
T Consensus 120 ~v~~v~~~-------d-~~l~~~i~~---~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~ 185 (393)
T 1n8p_A 120 ETSFTNDL-------L-NDLPQLIKE---NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPY 185 (393)
T ss_dssp CCEEESSH-------H-HHHHHHSCS---SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHH
T ss_pred EEEEeCCC-------h-HHHHHhccc---CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccc
Confidence 88888762 6 788888864 6888888999999999886 67788889999 99999999988665
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCc-ceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHH
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN 305 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 305 (410)
.. +.. . .+.++++.|+||.+|.+|+|+ ||+ +++++++++.+...... ....++...+.++..
T Consensus 186 ~~----~~~------~-~~~di~~~S~sK~~g~~G~rigG~~--~~~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~ 248 (393)
T 1n8p_A 186 IS----NPL------N-FGADIVVHSATKYINGHSDVVLGVL--ATNNKPLYERLQFLQNA----IGAIPSPFDAWLTHR 248 (393)
T ss_dssp HC----CGG------G-GTCSEEEEETTTTTTCSSCCCCEEE--EESCHHHHHHHHHHHHH----HCCCCCHHHHHHHHH
T ss_pred cC----CHH------H-cCCeEEEEECcccccCCCCceeEEE--EeCCHHHHHHHHHHHHh----cCCCCCHHHHHHHHh
Confidence 32 111 1 146799999999999999999 886 44456766666543221 112233333333444
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 306 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
.++.. ....++..++...+.+.|. +.
T Consensus 249 ~l~~~----------~~~~~~~~~~~~~l~~~L~-~~ 274 (393)
T 1n8p_A 249 GLKTL----------HLRVRQAALSANKIAEFLA-AD 274 (393)
T ss_dssp HHTTH----------HHHHHHHHHHHHHHHHHHT-SC
T ss_pred ccchH----------HHHHHHHHHHHHHHHHHHH-hC
Confidence 44421 2333444555666666666 44
No 205
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.88 E-value=6.8e-21 Score=181.28 Aligned_cols=247 Identities=14% Similarity=0.075 Sum_probs=168.2
Q ss_pred HHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 55 DVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 55 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
.++.+++.+.... .....| +..+..++++.+++++... ..++++++++|++|+..+ +...+.+|
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y-~~~~~~~Le~~lA~l~g~e-------~alv~p~~~sGt~Ai~~a--l~all~~G 101 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGY-DDEGRDTLERVYATVFKTE-------AALVRPQIISGTHAISTV--LFGILRPD 101 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCT-TCHHHHHHHHHHHHHHTCS-------EEEEETTSCSHHHHHHHH--HHHHCCTT
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCC-ChhHHHHHHHHHHHHhCCC-------cEEEECCCccHHHHHHHH--HHHhcCCC
Confidence 5666777664311 111334 3456789999999996332 234322258899999887 45557899
Q ss_pred CEEEEcC-CCCcchhh----------hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC----CCCCC
Q 015283 129 AKVLISS-PTWGNHKN----------IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHNPT 193 (410)
Q Consensus 129 d~Vl~~~-p~y~~~~~----------~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~----p~NPt 193 (410)
|+|++++ |.|..+.. .++..|.+++.+++. +++.+|++++++.+++ +++++++++ |+|||
T Consensus 102 D~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~--~~g~~d~e~l~~ai~~---~tklV~i~~s~g~p~npt 176 (409)
T 3jzl_A 102 DELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLL--ENGDVDFPRIAKKMTP---KTKMIGIQRSRGYADRPS 176 (409)
T ss_dssp CEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCC--TTSCCCHHHHHHHCCT---TEEEEEEECSCTTSSSCC
T ss_pred CEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCC--CCCCcCHHHHHHhccC---CCeEEEEECCCCCCCCCc
Confidence 9999998 99998874 456678888888873 4577999999999875 678888888 99999
Q ss_pred CCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCC-CcceEEEE
Q 015283 194 GIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVV 270 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~l~~~ 270 (410)
|. ..++++|+++|++ +|+++++|++|..+.+. .. +. ....+++++|+||.+|.+|. +.||+++
T Consensus 177 g~---v~~l~~I~~la~~~~~~~~livD~a~~~~~~~-~~--p~-------~~g~Div~~S~sK~lgg~~~~~GG~v~~- 242 (409)
T 3jzl_A 177 FT---IEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY-QE--PP-------EVGADIIAGSLIKNPGGGLAKTGGYIAG- 242 (409)
T ss_dssp CC---HHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS-CC--SG-------GGTCSEEEEETTSGGGTTTCSSCEEEEE-
T ss_pred Cc---cccHHHHHHHHHhhCCCCEEEEeCCccccccc-CC--cc-------ccCCeEEEECccccCCccCCceEEEEEe-
Confidence 98 7899999999999 99999999999877632 11 11 11346899999999986663 3577644
Q ss_pred eCCchhHHHHHHHHHhh-ccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 271 CSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 271 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
++++++++....... ........... +.++...+ +.....+++..+++.++.+.|+ ++|.
T Consensus 243 --~~~li~~l~~~~~~~~~g~~~g~~~~~-~~~~l~gl----------~~~~~r~~~~~~~a~~la~~L~-~~g~ 303 (409)
T 3jzl_A 243 --KEALVDLCGYRLTTPGIGREAGASLYS-LLEMYQGF----------FLAPHVTAQAIKGARFTAAMLA-EFGV 303 (409)
T ss_dssp --CHHHHHHHHHHHSCTTTGGGCCCCTTC-HHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred --CHHHHHHHHHHhccccccccccccHHH-HHHHHHHH----------hhHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 788777766543211 10111111111 12222222 1234566777888899999998 8874
No 206
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.88 E-value=4.2e-22 Score=195.33 Aligned_cols=327 Identities=10% Similarity=0.002 Sum_probs=208.3
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCccc-------CCceEEEecCChhhHHHHHHHHHHHh-
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-------EQRVATVQGLSGTGSLRLAAALIERY- 125 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~-------~~~i~~~~t~ggt~a~~~~~~~~~~~- 125 (410)
+..+.+++..+++... ..|....+..++++++++++.+.+|.+.+ ...+++ |+|||+|+..+.......
T Consensus 87 ~~~~~~~~~~~~n~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~--t~ggTeA~~~al~~~~~~~ 163 (486)
T 1js3_A 87 PAMLADMLCGAIGCIG-FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI--QGSASEATLVALLAARTKV 163 (486)
T ss_dssp HHHHHHHHHHHHCCCC-SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE--ESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCc-cccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEE--cCCcHHHHHHHHHHHHHHH
Confidence 4567777777765543 56766667889999999888777766432 245777 999999988874433221
Q ss_pred CC------CC--------E--EEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEe
Q 015283 126 FP------GA--------K--VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLH 186 (410)
Q Consensus 126 ~~------gd--------~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~ 186 (410)
.+ || . |++++++|..+...++..|.+++.+|+ ++++.+|++.|++.+.+. +..+.++++
T Consensus 164 ~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~--d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~ 241 (486)
T 1js3_A 164 VRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPS--DGKFAMRASALQEALERDKAAGLIPFFVVA 241 (486)
T ss_dssp HHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECC--CTTSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeec--CCCCCCCHHHHHHHHHHHHhCCCCceEEEE
Confidence 11 43 3 788999999999999999999999988 357889999999999751 111247777
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcce
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 266 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 266 (410)
++|+||||. .+++++|+++|++||+++++|++|.++.....+.. .. +........++.|.+|.++.| +++|+
T Consensus 242 ~~~~n~tG~---~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~--~~--~~g~~~adsi~~~~hK~~~~p-~~~G~ 313 (486)
T 1js3_A 242 TLGTTSCCS---FDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFR--HL--LNGVEFADSFNFNPHKWLLVN-FDCSA 313 (486)
T ss_dssp EBSCTTTCC---BCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTG--GG--GTTGGGCSEEEECHHHHSSCC-SSCEE
T ss_pred eCCCCCCCC---CCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHH--HH--hcCccccCeeEEchhhhcCCC-cceEE
Confidence 899999998 46788999999999999999999887543100111 10 001112234567899999865 88999
Q ss_pred EEEEeCCchh-HHHHH---HHHHhhcc------C--c----cc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 267 MNVVCSSSDL-AARVK---SQLKRLAR------P--M----YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 267 l~~~~~~~~~-~~~~~---~~~~~~~~------~--~----~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
+ ++++++. .+.+. .++..... . . .+ ....+.+.++...+. .+.+++..++..+
T Consensus 314 l--~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g--------~~g~~~~~~~~~~ 383 (486)
T 1js3_A 314 M--WVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG--------VKGLQAYIRKHVQ 383 (486)
T ss_dssp E--EESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH--------HHHHHHHHHHHHH
T ss_pred E--EEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh--------HHHHHHHHHHHHH
Confidence 8 4455543 22221 11111000 0 0 00 112233333333321 2335677788888
Q ss_pred HHHHHHHHhhhccCCCCCcccc-cCCcceeeec--CC---CHHHHHHhhhcCcEEE-cCC---C----eEEecC--CCcc
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFI-LRQIGMFSFT--GL---NKAQSDNMTNKWHVYM-TKD---G----RISLAG--LSLA 393 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~~--~~---~~~~~~~ll~~~gi~v-~~~---g----Ris~~~--~~~~ 393 (410)
+++++.+.|+ +.+. +++. ++..+.+.|- +. +.++.+++.++ |+.+ .++ + |+++.. .+++
T Consensus 384 ~a~~l~~~L~-~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~lRi~~~~~~~t~~ 458 (486)
T 1js3_A 384 LSHEFEAFVL-QDPR---FEVCAEVTLGLVCFRLKGSDGLNEALLERINSA-RKIHLVPCRLRGQFVLRFAICSRKVESG 458 (486)
T ss_dssp HHHHHHHHHH-HCTT---EEECSCCCSSEEEEEESSCHHHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHH
T ss_pred HHHHHHHHHh-cCCC---eEEeCCCceeEEEEEecChHHHHHHHHHHHHhc-CCEEEEEEEECCEEEEEEEeCCCCCCHH
Confidence 9999999998 7631 4443 3444555432 22 23445666654 6543 321 2 999754 3778
Q ss_pred cHHHHHHHHHHHhhh
Q 015283 394 KCEYLADAIIDSYHN 408 (410)
Q Consensus 394 ~i~~~~~~l~~~l~~ 408 (410)
++++++++|++++++
T Consensus 459 di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 459 HVRLAWEHIRGLAAE 473 (486)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988754
No 207
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.88 E-value=1.2e-20 Score=181.11 Aligned_cols=159 Identities=13% Similarity=0.043 Sum_probs=123.4
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh----hhhhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~ 150 (410)
+.....++++.+++++.. +..++ +++|++|+.++ +...+.+||+|++++|+|.++.. .++..|.
T Consensus 80 ~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 147 (430)
T 3ri6_A 80 SNPTVEDLEQRLKNLTGA--------LGVLA--LGSGMAAISTA--ILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGI 147 (430)
T ss_dssp CCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCC
Confidence 456678999999998633 22344 57888998887 44457899999999999998877 5668899
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 230 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 230 (410)
+++.++.. |++.+++.+++ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 148 ~~~~v~~~-------d~~~l~~ai~~---~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~-- 212 (430)
T 3ri6_A 148 EVRFVDVM-------DSLAVEHACDE---TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL-- 212 (430)
T ss_dssp EEEEECTT-------CHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC--
T ss_pred EEEEeCCC-------CHHHHHHhhCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 98888762 78999998875 7888889999999999876 567788899999999999998754431
Q ss_pred CCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 231 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
.+. ..+.++++.|+||.++.+|..+|.+++
T Consensus 213 --~~~-------~~g~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 213 --EAK-------RLGVDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp --CGG-------GGTCSEEEEECCCEEETTEEECCEEEE
T ss_pred --ChH-------HcCCEEEEECCcccccCCCCceEEEEE
Confidence 111 113568999999999877777777743
No 208
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.88 E-value=1.1e-20 Score=180.45 Aligned_cols=248 Identities=15% Similarity=0.089 Sum_probs=168.6
Q ss_pred HHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 55 DVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 55 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
+.|.+++.+.... .....| +..|..++++.+++++... ..++++++++|++|+..+ +...+.||
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y-~~~~~~~Le~~lA~l~g~e-------~alv~p~~~sGt~Ai~~a--l~all~pG 115 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGY-GDIGRDSLDAVYARVFNTE-------SALVRPHFVNGTHALGAA--LFGNLRPG 115 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHHTCS-------EEEEETTCCSHHHHHHHH--HHHHCCTT
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCC-CHHHHHHHHHHHHHHhCCc-------ceEEeCCCccHHHHHHHH--HHHHhCCC
Confidence 6677777664211 111234 4456889999999996432 234422258889999887 45557899
Q ss_pred CEEEEcC-CCCcchh-----------hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC----CCCC
Q 015283 129 AKVLISS-PTWGNHK-----------NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHNP 192 (410)
Q Consensus 129 d~Vl~~~-p~y~~~~-----------~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~----p~NP 192 (410)
|+|++++ |.|+.+. ..++..|.+++.+++. +++.+|++.+++.+++. ++++++++++ |+||
T Consensus 116 D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~--~~g~~D~e~l~~~l~~~-~~tklV~i~~s~~~p~np 192 (427)
T 3i16_A 116 NTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLK--EDGKPNLEEIEKVLKED-ESITLVHIQRSTGYGWRR 192 (427)
T ss_dssp CEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCC--TTSSCCHHHHHHHHHTC-TTEEEEEEECSCCSSSSC
T ss_pred CEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCc--cCCCcCHHHHHHHhhCC-CCCEEEEEEcCCCCCCCC
Confidence 9999999 9999876 3455678888888873 44678999999999831 2677777777 8999
Q ss_pred CCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEE
Q 015283 193 TGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNV 269 (410)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~ 269 (410)
||. ..++++|+++|++ +|+++++|++|..+.+. ..+. ....+++++|+||.+|.+| .+.||+++
T Consensus 193 tg~---i~dl~~i~~la~~~~~g~~livD~a~~~~~~~---~~p~-------~~gaDiv~~S~sK~lgg~g~~~gG~i~~ 259 (427)
T 3i16_A 193 ALL---IEDIKSIVDCVKNIRKDIICFVDNCYGEFMDT---KEPT-------DVGADLIAGSLIKNIGGGIAPTGGYLAG 259 (427)
T ss_dssp CCC---HHHHHHHHHHHHHHCTTSEEEEECTTTTTSSS---SCGG-------GGTCSEEEEETTSGGGTTTCCSCEEEEE
T ss_pred ccc---HHHHHHHHHHHHHhCCCCEEEEECCCcccccc---CCcc-------ccCCeEEEecCcccCCCCCCceEEEEEE
Confidence 987 7899999999999 99999999999877632 1111 1134689999999998666 56688654
Q ss_pred EeCCchhHHHHHHHHHhhccCccc-CCChhH-HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 270 VCSSSDLAARVKSQLKRLARPMYS-NPPVHG-ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
++++++++..... ...... ..+... ..++...+ +......++..+++..+.+.|+ ++|.
T Consensus 260 ---~~~li~~l~~~~~--~~~~g~~~~~~~~~a~~~l~gl----------~~~~~r~~~~~~~a~~la~~L~-~~g~ 320 (427)
T 3i16_A 260 ---TKDCIEKTSYRLT--VPGIGGECGSTFGVVRSMYQGL----------FLAPHISMEALKGAILCSRIME-LAGF 320 (427)
T ss_dssp ---CHHHHHHHHHHHS--CTTTGGGCCCCTTCHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred ---CHHHHHHHHHhcc--cCccCccCCccHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 7887777665432 111111 122121 22222221 1234667788888889999998 8873
No 209
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.87 E-value=5.3e-21 Score=183.54 Aligned_cols=253 Identities=16% Similarity=0.088 Sum_probs=165.0
Q ss_pred cHHHHHHHHHhhcc-C---CCccCc-CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCC
Q 015283 54 LDVVKKAENLMLER-G---ENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 128 (410)
Q Consensus 54 ~~~v~~a~~~~~~~-~---~~~~y~-~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~g 128 (410)
.+++.+++.+.... . ....|. +..+..++++.+++++.. .....++.+ .+|++|+..+ +...+.+|
T Consensus 37 ~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~----~~~~~~i~~---~sGt~Ai~~a--l~al~~~G 107 (431)
T 3ht4_A 37 QFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA----EAGLVRPQI---ISGTHAISTA--LFGILRPG 107 (431)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTC----SEECCBTTS---CSHHHHHHHH--HHTTCCTT
T ss_pred HHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCC----Cccccccee---eCHHHHHHHH--HHHhCCCC
Confidence 46777777664311 1 011121 233455667777766432 222223334 4789999887 44457799
Q ss_pred CEEEEcC-CCCcchhhhh----------hhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC-CCCCCCCCC
Q 015283 129 AKVLISS-PTWGNHKNIF----------NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG-CAHNPTGID 196 (410)
Q Consensus 129 d~Vl~~~-p~y~~~~~~~----------~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~-~p~NPtG~~ 196 (410)
|+|++++ |.|..+...+ +..|.+++.++.. +++.+|++.+++.+++ ++++++++ +|+||||..
T Consensus 108 d~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~--~~~~~d~e~l~~~l~~---~tk~V~i~~sp~np~~~~ 182 (431)
T 3ht4_A 108 DELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLT--EGGLVDFEAVAAAIHS---NTKMIGIQRSKGYATRPS 182 (431)
T ss_dssp CEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBC--TTSSBCHHHHHHHCCT---TEEEEEEECSCTTSSSCC
T ss_pred CEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCC--CCCCcCHHHHHhhcCC---CCeEEEEECCCCCCCCCc
Confidence 9999998 9999887544 4578888888873 4578999999999875 66666666 699999999
Q ss_pred CCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccc-cCCCcceEEEEeCC
Q 015283 197 PTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSS 273 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~l~~~~~~ 273 (410)
++.+++++|+++|++ +|+++|+|++|..+.+.. .+. ....+++++|+||.+|. .+...||+++ +
T Consensus 183 ~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~---~~~-------~~g~Di~~~S~sK~lgg~~~~~GG~v~~---~ 249 (431)
T 3ht4_A 183 FTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQ---EPC-------HVGADLMAGSLIKNPGGGIVKTGGYIVG---K 249 (431)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSC---CGG-------GTTCSEEEEETTSGGGTTTCSSCEEEEE---C
T ss_pred CCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCC---Ccc-------ccCCeEEEcCccccCCCCCCCceEEEEe---c
Confidence 999999999999999 999999999999887531 111 11246899999999763 1233488754 7
Q ss_pred chhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 274 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
+++++++..............++...+.++...+ +......++..++..++.+.|+ ++|.
T Consensus 250 ~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l----------~~~~~~~~~~~~~a~~l~~~L~-~~g~ 309 (431)
T 3ht4_A 250 EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF----------FLAPHVAGQALKGAIFTAAFLE-KLGM 309 (431)
T ss_dssp HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-HHTC
T ss_pred HHHHHHHHHHhccCCcccccCccHHHHHHHHhHh----------hhHHHHHHHHHHHHHHHHHHHH-hCcC
Confidence 8877776554331111111112111112222211 1224556777888888899998 8874
No 210
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.87 E-value=2.2e-21 Score=190.96 Aligned_cols=323 Identities=11% Similarity=0.019 Sum_probs=205.2
Q ss_pred HHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh------CCC----
Q 015283 59 KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------FPG---- 128 (410)
Q Consensus 59 ~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~------~~g---- 128 (410)
+.+..+.+... ..|....+..++++++.+++.+..|.+.+.+++++ ++|||+++.++...++.. .+|
T Consensus 111 ~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~--t~ggtea~~~al~~~~~~~~~~~~~~G~~~~ 187 (504)
T 2okj_A 111 EWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIF--SPGGAISNMYSIMAARYKYFPEVKTKGMAAV 187 (504)
T ss_dssp HHHHHHHCCBS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEE--ESSHHHHHHHHHHHHHHHHCTTHHHHCGGGS
T ss_pred HHHHHhhccCC-CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEE--eCCcHHHHHHHHHHHHHHHhhHHhhcCcccc
Confidence 44555444432 45655556667777777776665565433568888 999999999885554321 246
Q ss_pred -C-EEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCCCCHH
Q 015283 129 -A-KVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPE 200 (410)
Q Consensus 129 -d-~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~~~~~ 200 (410)
+ .|+++++.|..+...+...|. +++.+|+ ++++.+|++.|++.+.+. +.++.++++++|+||||.+ .
T Consensus 188 ~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~ 262 (504)
T 2okj_A 188 PKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC--NERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---D 262 (504)
T ss_dssp CCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB--CTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---C
T ss_pred CCeEEEECCcchHHHHHHHHHcCCCcccEEEEec--CCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---C
Confidence 6 789999999999988888776 7788887 356889999999998651 2247788889999999995 4
Q ss_pred HHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283 201 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 201 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
++++|+++|++||+++++|++|.++.....+.. .. +......++++.|++|.++.| .++|+++ ++++++.+..
T Consensus 263 ~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~-~~---~~g~~~~D~i~~~~hK~~~~p-~~~g~l~--~~~~~~~~~~ 335 (504)
T 2okj_A 263 PIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR-HK---LNGIERANSVTWNPHKMMGVL-LQCSAIL--VKEKGILQGC 335 (504)
T ss_dssp CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG-GG---GTTGGGCSEEEECTTSTTCCC-SCCEEEE--ESSTTHHHHH
T ss_pred CHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhH-hh---cCCcccCCEEEECchhhcCCC-cceEEEE--EECHHHHHHH
Confidence 577888889999999999999987764211100 11 111112346778999998855 6889984 4555543322
Q ss_pred HHHHHhhccC-cc-------------c---CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 281 KSQLKRLARP-MY-------------S---NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 281 ~~~~~~~~~~-~~-------------~---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
......+... .. . ....+.+.++...+. .+.+++..++..++++++.+.|+ +..
T Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg--------~~g~~~~~~~~~~~a~~l~~~L~-~~~ 406 (504)
T 2okj_A 336 NQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--------TVGFENQINKCLELAEYLYAKIK-NRE 406 (504)
T ss_dssp HCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHT-TCT
T ss_pred hcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 1111111100 00 0 011233333333332 23356777888889999999998 763
Q ss_pred CCCCccccc---CCcceeeec--CC------------------CHHHHHHhhhcCcE-EEcC----C--C--eEEecC--
Q 015283 344 SGKDWSFIL---RQIGMFSFT--GL------------------NKAQSDNMTNKWHV-YMTK----D--G--RISLAG-- 389 (410)
Q Consensus 344 ~~~~~~~~~---~~~~~~~~~--~~------------------~~~~~~~ll~~~gi-~v~~----~--g--Ris~~~-- 389 (410)
. +++.. +..+++.|. +. ..++.+++.++ |+ ++.+ + + |+++++
T Consensus 407 ~---~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~~lRis~~~~~ 482 (504)
T 2okj_A 407 E---FEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQPQGDKANFFRMVISNPA 482 (504)
T ss_dssp T---EEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEECCCCTT
T ss_pred C---EEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEeeEECCceEEEEEEeCCCC
Confidence 1 44442 566666553 11 12345566654 64 3321 2 2 998862
Q ss_pred CCcccHHHHHHHHHHHhhhc
Q 015283 390 LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 390 ~~~~~i~~~~~~l~~~l~~~ 409 (410)
.+++++++++++|+++++++
T Consensus 483 ~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 483 ATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp CCHHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 38899999999999988764
No 211
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.87 E-value=1.5e-20 Score=179.45 Aligned_cols=250 Identities=13% Similarity=0.044 Sum_probs=167.2
Q ss_pred cHHHHHHHHHhhcc------CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCC
Q 015283 54 LDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 127 (410)
Q Consensus 54 ~~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~ 127 (410)
.+.|.+++.+.... .....| +..|..++++.+++++... ..++++++++|++|+..+ +...+.|
T Consensus 46 ~~~Vl~a~~~~~~~~~~~~~~~gy~Y-~~~g~~~Le~~lA~l~g~e-------~alv~p~~~sGt~A~~~a--l~all~p 115 (427)
T 3hvy_A 46 QLKVLKAFQEERISESHFTNSSGYGY-NDIGRDSLDRVYANIFNTE-------SAFVRPHFVNGTHAIGAA--LFGNLRP 115 (427)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHHTCS-------EEEEETTCCSHHHHHHHH--HHHTCCT
T ss_pred HHHHHHHHHHHHHHHHhcccCcCCCC-CchhHHHHHHHHHHHhCCC-------ceEEeCCCCcHHHHHHHH--HHHhcCC
Confidence 36777777765321 111234 3447889999999996432 234421258899999887 4555789
Q ss_pred CCEEEEcC-CCCcchh-----------hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCC----CCC
Q 015283 128 GAKVLISS-PTWGNHK-----------NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHN 191 (410)
Q Consensus 128 gd~Vl~~~-p~y~~~~-----------~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~----p~N 191 (410)
||+|++++ |.|+.+. ..++..|.+++.++. +++.+|++.+++.+++. ++++++++++ |+|
T Consensus 116 GD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~-~~tklV~i~~s~gyp~n 191 (427)
T 3hvy_A 116 NDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKD-DSIKLIHIQRSTGYGWR 191 (427)
T ss_dssp TCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHC-TTEEEEEEESSCCSSSS
T ss_pred CCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCC-CCCEEEEEECCCCCCCC
Confidence 99999999 9998876 445567888888876 35679999999999831 2677777777 899
Q ss_pred CCCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEE
Q 015283 192 PTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMN 268 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~ 268 (410)
|||. ..++++|+++|++ +|+++++|++|..+.+. ..+. ....+++++|+||.+|.+| .+.||++
T Consensus 192 ptg~---v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~---~~p~-------~~gaDiv~~S~sK~lgg~g~~~GG~i~ 258 (427)
T 3hvy_A 192 KSLR---IAEIAEIIKSIREVNENVIVFVDNCYGEFVEE---KEPT-------DVGADIIAGSLIKNIGGGIATTGGYIA 258 (427)
T ss_dssp CCCC---HHHHHHHHHHHHHHCSSSEEEEECTTCTTTSS---SCGG-------GGTCSEEEEETTSGGGTTTCCSCEEEE
T ss_pred cccc---HHHHHHHHHHHHHhCCCCEEEEECCccccccC---CCCc-------ccCCeEEEECCcccccccccceEEEEE
Confidence 9987 7899999999999 89999999999877632 1111 1134689999999998655 4457764
Q ss_pred EEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 269 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
+ ++++++++..............++...+.++...+. ......++..+++.++.+.|+ ++|.
T Consensus 259 ~---~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~----------~~~~r~~~~~~~a~~la~~L~-~~g~ 320 (427)
T 3hvy_A 259 G---KEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLF----------MAPHVTIEAVKGAVFCARIME-LAGF 320 (427)
T ss_dssp E---CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred E---CHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHh----------HHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 4 788777766543211000011121111222222221 124566777888888999998 8874
No 212
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.87 E-value=5.6e-21 Score=187.90 Aligned_cols=326 Identities=11% Similarity=0.031 Sum_probs=213.0
Q ss_pred HHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh---------
Q 015283 55 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--------- 125 (410)
Q Consensus 55 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~--------- 125 (410)
..+.+++...++... ..|....+..++++++++|+.+.+|.+.+++.+++ ++|||+|+..+.......
T Consensus 110 ~~~~e~l~~~~~~~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~~~~~G 186 (511)
T 3vp6_A 110 GLAGEWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIF--SPGGAISNMYSIMAARYKYFPEVKTKG 186 (511)
T ss_dssp HHHHHHHHHHHCCCS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEE--ESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred HHHHHHHHHHhccCC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEE--CCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence 445566776665543 67877788899999999998877777655578888 999999998874443321
Q ss_pred ---CCCCEEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCCCC
Q 015283 126 ---FPGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGID 196 (410)
Q Consensus 126 ---~~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG~~ 196 (410)
.+++.|++++++|.++...++..|. +++.++. ++++.+|++.|++.+.+. +..+++++.++++||||.+
T Consensus 187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~--d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v 264 (511)
T 3vp6_A 187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC--NERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF 264 (511)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB--CTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeec--CCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence 1567899999999999999999988 7777777 356889999999999752 1227788889999999995
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL 276 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~ 276 (410)
+++++|+++|++||+++++|++|....... +.... .+......++++.+.+|.++.| ...|++ +.++++.
T Consensus 265 ---d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~---~~~~~-~~~g~~~aDsv~~~~hK~l~~p-~g~g~l--~~~~~~~ 334 (511)
T 3vp6_A 265 ---DPIQEIADICEKYNLWLHVDAAWGGGLLMS---RKHRH-KLNGIERANSVTWNPHKMMGVL-LQCSAI--LVKEKGI 334 (511)
T ss_dssp ---CCHHHHHHHHHHHTCEEEEEETTGGGGGGC---TTTGG-GGTTGGGCSEEEECTTSTTCCC-SCCEEE--EESSTTH
T ss_pred ---ccHHHHHHHHHHcCCEEEEEccchhhHhhC---hhhhh-hccCCccCCEEEECcccccCCC-cCeEEE--EEeCHHH
Confidence 678899999999999999999987655311 00010 0111112456678999998755 667887 4556654
Q ss_pred HHHHHHHHHhhccCc------------c----c-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015283 277 AARVKSQLKRLARPM------------Y----S-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 339 (410)
Q Consensus 277 ~~~~~~~~~~~~~~~------------~----~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 339 (410)
..+.......+.... + + ....+...++...+. .+.+++..++..++.+++.+.|+
T Consensus 335 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g--------~~gl~~~~~~~~~~a~~l~~~L~ 406 (511)
T 3vp6_A 335 LQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--------TVGFENQINKCLELAEYLYAKIK 406 (511)
T ss_dssp HHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 333221111111100 0 0 011222222322221 23456788888999999999998
Q ss_pred hccCCCCCccccc---CCcceeeec--C--C----------------CHHHHHHhhhcCcEEEcC-----CC----eEEe
Q 015283 340 AKDKSGKDWSFIL---RQIGMFSFT--G--L----------------NKAQSDNMTNKWHVYMTK-----DG----RISL 387 (410)
Q Consensus 340 ~~~g~~~~~~~~~---~~~~~~~~~--~--~----------------~~~~~~~ll~~~gi~v~~-----~g----Ris~ 387 (410)
+.+. +++.. +..+.+.|. + + +.++.++|+++ |+.+.. ++ ||++
T Consensus 407 -~~pg---~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~~lRi~~ 481 (511)
T 3vp6_A 407 -NREE---FEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQPQGDKANFFRMVI 481 (511)
T ss_dssp -SCTT---EEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEECC
T ss_pred -cCCC---EEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEeCCceEEEEEEe
Confidence 7631 44433 455554441 1 1 11345566665 643322 22 8887
Q ss_pred cC--CCcccHHHHHHHHHHHhhh
Q 015283 388 AG--LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 388 ~~--~~~~~i~~~~~~l~~~l~~ 408 (410)
++ .++++++.+++.|+++-+.
T Consensus 482 ~~~~~t~~di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 482 SNPAATQSDIDFLIEEIERLGQD 504 (511)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHC-
T ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Confidence 43 4789999999999987654
No 213
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.87 E-value=1.9e-21 Score=185.72 Aligned_cols=316 Identities=9% Similarity=0.019 Sum_probs=190.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc--CCCccCcC-CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~-~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
+.++++..| .+.+++.+.+++.+.... +..+.|+. .....++|+.+++++ |.+ ++++|++ .|+|
T Consensus 39 ~~~~~~~~~-------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~i~~-~t~g 105 (398)
T 2fyf_A 39 PRDGRFGSG-------PSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELF----SLP-DGYEVIL-GNGG 105 (398)
T ss_dssp CSSCBCCSS-------SCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTCEEEE-EETC
T ss_pred cCCccccCC-------CCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEE-eCCc
Confidence 345666644 234578999888763211 11122211 123467777777775 322 1346543 2799
Q ss_pred hhhHHHHHHHHHHHhCCCCEEEEcCCCCcc-hhhhhhhC--CCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeC
Q 015283 111 GTGSLRLAAALIERYFPGAKVLISSPTWGN-HKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 187 (410)
Q Consensus 111 gt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~ 187 (410)
|++++.+++ ...+.+| .+++..+.|.. ....+... |.+++.++.. +++..+. . +. +++++++++
T Consensus 106 ~t~al~~~~--~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-~----i~---~~~~~v~~~ 172 (398)
T 2fyf_A 106 ATAFWDAAA--FGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-Q----TD---PSVDVIAWA 172 (398)
T ss_dssp HHHHHHHHH--HHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-C----CC---TTCSEEEEE
T ss_pred hhHHHHHHH--HHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-c----cc---CCCCEEEEe
Confidence 999999984 3336676 22233333321 12234445 7888888873 3333332 1 22 356677778
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceE
Q 015283 188 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 267 (410)
Q Consensus 188 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l 267 (410)
+|+||||.+++.+++.++ +|+++|+|++|..+... . .+ . ..++++.|+||.+|++| ++||+
T Consensus 173 ~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~---~---~~----~--~~di~~~s~sK~~~~~g-g~g~l 233 (398)
T 2fyf_A 173 HNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP---V---DI----A--ETDAYYFAPQKNFASDG-GLWLA 233 (398)
T ss_dssp SEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC---C---CG----G--GCSEEEECTTSTTCSCS-SEEEE
T ss_pred CcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc---c---Cc----c--cCcEEEEecCcccCCCC-ceEEE
Confidence 999999999998887765 89999999998765521 1 11 1 13578899999999875 58997
Q ss_pred EEEeCCchhHHHHHHHH----------------Hhh-ccCcccCCChhHHHHHHHHhCChhhHHHHHHH--HHHHHHHHH
Q 015283 268 NVVCSSSDLAARVKSQL----------------KRL-ARPMYSNPPVHGARIVANVVGNPALFDEWKAE--MEMMAGRIK 328 (410)
Q Consensus 268 ~~~~~~~~~~~~~~~~~----------------~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~--~~~~~~~~~ 328 (410)
++ ++++++++.... ... ....+.+++..++.++...++. +.+. +++.+++++
T Consensus 234 ~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~------~~~~g~~~~~~~~~~ 304 (398)
T 2fyf_A 234 IM---SPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDW------LVGNGGLDWAVKRTA 304 (398)
T ss_dssp EE---CHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH------HHHHTSHHHHHHHHH
T ss_pred EE---CHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHH------HHHccCHHHHHHHHH
Confidence 65 777766654321 000 0112233444444444434331 1122 567888899
Q ss_pred HHHHHHHHHhhhccCCCCCccccc--C--CcceeeecC----CCH-HHHHHhhhcCcEEEcCC------C--eEEecC-C
Q 015283 329 NVRQKLFDSLSAKDKSGKDWSFIL--R--QIGMFSFTG----LNK-AQSDNMTNKWHVYMTKD------G--RISLAG-L 390 (410)
Q Consensus 329 ~~~~~l~~~l~~~~g~~~~~~~~~--~--~~~~~~~~~----~~~-~~~~~ll~~~gi~v~~~------g--Ris~~~-~ 390 (410)
++++++.+.|+ +++ + +++.. + .+++++|+. .+. ++.++|.+ .||.+.++ + ||++.. .
T Consensus 305 ~~~~~l~~~L~-~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~g~~~~~~~~iRis~~~~~ 379 (398)
T 2fyf_A 305 DSSQRLYSWAQ-ERP--Y-TTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAV 379 (398)
T ss_dssp HHHHHHHHHHH-HST--T-EEESCCSGGGBCSSEEEEEECTTSCHHHHHHHHHH-TTCBCCSCCTTTCSSEEEEECCTTS
T ss_pred HHHHHHHHHHH-HcC--C-ceeccCChhhcCCcEEEEECCCCCCHHHHHHHHHH-CCcEEecCcccCCCCEEEEEecCCC
Confidence 99999999998 772 1 34442 3 344366553 344 44566665 59999764 2 999874 4
Q ss_pred CcccHHHHHHHHHHHhhh
Q 015283 391 SLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 391 ~~~~i~~~~~~l~~~l~~ 408 (410)
+++++++++++|++++++
T Consensus 380 t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 380 EPDDVSALTECVDWVVER 397 (398)
T ss_dssp CHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999999875
No 214
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.87 E-value=1.3e-20 Score=179.54 Aligned_cols=216 Identities=16% Similarity=0.101 Sum_probs=150.5
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh-----hhCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-----NDAR 149 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-----~~~g 149 (410)
+.....++++.++++... +..++ +++|++|+..+ +..+.+||+|++++|+|.+....+ ...|
T Consensus 65 ~~p~~~~l~~~la~l~g~--------~~~~~--~~sG~~Ai~~~---~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g 131 (400)
T 3nmy_A 65 HNPTRFAYERCVAALEGG--------TRAFA--FASGMAATSTV---MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAG 131 (400)
T ss_dssp CCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH---HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHC
T ss_pred CCHHHHHHHHHHHHHhCC--------CCEEE--ecCHHHHHHHH---HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcC
Confidence 345567899999998532 24555 67889998874 445679999999999998655543 3458
Q ss_pred CCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCC
Q 015283 150 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 229 (410)
Q Consensus 150 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 229 (410)
.+++.++. .|++.+++.+++ +++++++++|+||||.+.+ +++|+++|++||+++|+|++|......
T Consensus 132 ~~~~~v~~-------~d~~~l~~~i~~---~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~- 197 (400)
T 3nmy_A 132 LDFSFVDL-------TDPAAFKAAIRA---DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ- 197 (400)
T ss_dssp CEEEEECT-------TSHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC-
T ss_pred eEEEEECC-------CCHHHHHHHhcc---CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence 88888776 278999998875 7788888999999999886 778888899999999999998632211
Q ss_pred CCCchhHhHHHhhcCCcEEEEecccccccccCCCcce-EEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhC
Q 015283 230 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA-MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 308 (410)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~ 308 (410)
. ++ ....++++.|+||.++.+|.++|+ + ++++++++++++..... ......+...+.++...++
T Consensus 198 ---~--~~-----~~g~div~~S~sK~l~g~g~~~gG~~-vv~~~~~~~~~l~~~~~----~~g~~~~~~~a~~~l~~l~ 262 (400)
T 3nmy_A 198 ---R--PL-----SLGADLVVHSATKYLNGHSDMVGGIA-VVGDNAELAEQMAFLQN----SIGGVQGPFDSFLALRGLK 262 (400)
T ss_dssp ---C--GG-----GGTCSEEEEETTTTTTCSSSCCCEEE-EECSCHHHHHHHHHHHH----HHCCBCCHHHHHHHHHHHT
T ss_pred ---C--hh-----hcCCcEEEecCccccCCCCCcceeEE-EEeCCHHHHHHHHHHHH----hcCCCCCHHHHHHHHHhHh
Confidence 0 11 113578899999999988888888 4 35667776666654332 1122344444444444444
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015283 309 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 343 (410)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 343 (410)
.. ....++..++...+.+.|+ +.+
T Consensus 263 ~l----------~~r~~~~~~~a~~l~~~L~-~~p 286 (400)
T 3nmy_A 263 TL----------PLRMRAHCENALALAQWLE-THP 286 (400)
T ss_dssp TH----------HHHHHHHHHHHHHHHHHHT-TCT
T ss_pred HH----------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 32 2344555667777777777 554
No 215
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.87 E-value=1.4e-21 Score=189.03 Aligned_cols=282 Identities=11% Similarity=0.019 Sum_probs=168.4
Q ss_pred cCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCC
Q 015283 72 EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP 151 (410)
Q Consensus 72 ~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~ 151 (410)
.|.+.....++++.+++ +. . .+.+++ ++|+|+++.++. ...+.+||+|+++.|+|.++...+...|++
T Consensus 52 ~~~~~~~~~~~~~~la~-~g----~---~~~v~~--~~G~t~a~~~~~--~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~ 119 (446)
T 2x3l_A 52 LHHPEEVILKSMKQVEK-HS----D---YDGYFL--VNGTTSGILSVI--QSFSQKKGDILMARNVHKSVLHALDISQQE 119 (446)
T ss_dssp TTSCSSHHHHHHHHHCS-CT----T---EEEEEE--SSHHHHHHHHHH--HTTTTSSSCEEECTTCCHHHHHHHHHHTCC
T ss_pred ccCcchHHHHHHHHHHh-cC----C---CceEEE--eCCHHHHHHHHH--HHhcCCCCEEEEecCccHHHHHHHHHcCCe
Confidence 34455566777777777 42 2 256888 999999999983 334679999999999999999999999999
Q ss_pred ccceeeecCCC----cccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCC-CC
Q 015283 152 WSEYRYYDPKT----VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FA 226 (410)
Q Consensus 152 ~~~v~~~~~~~----~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~-~~ 226 (410)
++.++....++ +.+|++.+ +. ++++++++++ .|+||.+.+ +++|+++|++||+++|+||+|.. +.
T Consensus 120 ~~~v~~~~~~~~~~~~~~d~~~l---~~---~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~ 189 (446)
T 2x3l_A 120 GHFIETHQSPLTNHYNKVNLSRL---NN---DGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFG 189 (446)
T ss_dssp EEECEEEECTTTSSEEEEEC-------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTT
T ss_pred EEEEeCeeccccCcCCCCCHHHH---cC---CCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhc
Confidence 99988732232 56788877 22 2455566566 566999877 56888889999999999999886 32
Q ss_pred CCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHH--HHHHHHHhhccCcccCCChhHHHHH-
Q 015283 227 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA--RVKSQLKRLARPMYSNPPVHGARIV- 303 (410)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a- 303 (410)
+.+. .... ... +..+++.|+||.++ ++.++||+++ +++.++ .+....... ....++.....++
T Consensus 190 f~~~---~~~~---~~~-g~Di~~~S~~K~l~-~~~g~g~l~~---~~~~i~~~~~~~~~~~~---~~~s~~~~~~aal~ 255 (446)
T 2x3l_A 190 LQGF---PDST---LNY-QADYVVQSFHKTLP-ALTMGSVLYI---HKNAPYRENIIEYLSYF---QTSSPSYLIMASLE 255 (446)
T ss_dssp STTS---CCCG---GGG-TCSEEEECHHHHSS-SCTTCEEEEE---ETTCTTHHHHHHHHHHH---SCSSCCHHHHHHHH
T ss_pred cCCC---CCCh---HHc-CCCEEEECCccccc-cccccEEEEE---cCCcCCHHHHHHHHHHH---cCCCchHHHHHHHH
Confidence 3211 1111 111 23488999999654 2345799854 344332 333222211 1122332221111
Q ss_pred --HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeec---CCCHHH-HHHhhhcCcE
Q 015283 304 --ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT---GLNKAQ-SDNMTNKWHV 377 (410)
Q Consensus 304 --~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~-~~~ll~~~gi 377 (410)
...+.... .++..++.+++++.+.+ .+ +.+..+..+.++|+ +.+... .+.|.+ +||
T Consensus 256 ~a~~~l~~~g--------~~~~~~~~~~l~~~l~~-----~g----~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~-~GI 317 (446)
T 2x3l_A 256 SAAQFYKTYD--------STLFFAKRAQLIECLEN-----KG----FEMLQVDDPLKLLIKYEGFTGHDIQNWFMN-AHI 317 (446)
T ss_dssp HHHHHHHHCC--------CHHHHHHHHHHHHHHHH-----HT----CEEEECSSTTEEEEECTTSCHHHHHHHHHH-TTE
T ss_pred HHHHHHHHhC--------HHHHHHHHHHHHHHHHH-----cC----CEECcCCCCeEEEEEeCCcCHHHHHHHHHH-CCC
Confidence 11111100 01133333444443333 23 23333333334555 334444 555555 599
Q ss_pred EEc-CCC---eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 378 YMT-KDG---RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 378 ~v~-~~g---Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
.+. ++. |++++. .+++++ +++++|+++++.
T Consensus 318 ~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 318 YLELADDYQALAILPLWHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp EESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred EEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHHh
Confidence 998 553 999864 388999 999999998764
No 216
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.86 E-value=4.5e-21 Score=186.87 Aligned_cols=338 Identities=12% Similarity=-0.009 Sum_probs=205.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhcc---CCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCC
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 110 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 110 (410)
...||+..|.+-...|+. +|.+.+++.+++.. .+...|.. ....++++++++.+.+.... ..+++.+ ++|
T Consensus 63 ~~ylD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~~v~f--~~s 135 (472)
T 1ohv_A 63 NRMLDLYSQISSIPIGYS--HPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMSQLIT--MAC 135 (472)
T ss_dssp CEEEESSHHHHTCSSCBT--CHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCCEEEE--ESS
T ss_pred CEEEECCCCHhhcccCCC--CHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcCEEEE--eCC
Confidence 467899888773445553 68999998887532 11122322 34568999999876554321 3578999 999
Q ss_pred hhhHHHHHHHHHHHh-----------------------CCC---CEEEEcCCCCcchhhhhh-hCCCCc-----------
Q 015283 111 GTGSLRLAAALIERY-----------------------FPG---AKVLISSPTWGNHKNIFN-DARVPW----------- 152 (410)
Q Consensus 111 gt~a~~~~~~~~~~~-----------------------~~g---d~Vl~~~p~y~~~~~~~~-~~g~~~----------- 152 (410)
|++|++.++++...+ .+| ++|++.+++|.++..... ..|...
T Consensus 136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~ 215 (472)
T 1ohv_A 136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence 999999998766422 146 899999999987755432 333211
Q ss_pred cceeeecC--C---C--c-----ccChhhHHHHHhcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcc
Q 015283 153 SEYRYYDP--K---T--V-----GLDFEGMIADIKAAP---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIP 216 (410)
Q Consensus 153 ~~v~~~~~--~---~--~-----~~d~~~l~~~i~~~~---~~~~~ii~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~l 216 (410)
..++.... . . + ..|++.+++.+.+.. .+++++++.+.+|+||. ..+.+.+++|.++|++||+++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 295 (472)
T 1ohv_A 216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF 295 (472)
T ss_dssp CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 11111000 0 0 0 136788888886521 15677777777888997 567888999999999999999
Q ss_pred cccccCCCCCCCCCCCchhHhHHHhhcC--CcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccC
Q 015283 217 FFDVAYQGFASGSLDNDASSVRLFATRG--MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSN 294 (410)
Q Consensus 217 i~Deay~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (410)
|+||+|.+++..+ ..+.+..+ +.. .+ +.||||.+ ++| ||. + ++++ .. ........+.+
T Consensus 296 i~DEv~~g~g~~g---~~~~~~~~-gv~~~~D---i~t~sK~~-l~G---G~~--~--~~~~----~~-~~~~~~~~T~~ 355 (472)
T 1ohv_A 296 LVDEVQTGGGSTG---KFWAHEHW-GLDDPAD---VMTFSKKM-MTG---GFF--H--KEEF----RP-NAPYRIFNTWL 355 (472)
T ss_dssp EEECTTTTTTTTS---SSSGGGGG-CCSSCCS---EEEECGGG-SSE---EEE--E--CGGG----SC-SSSSSSCCSSS
T ss_pred EEeCcccCCCCCC---Cchhcccc-CCCCCCC---EEEEcccc-ccC---Ccc--C--chhh----cc-cccccccCccC
Confidence 9999998877432 11222111 111 22 34899995 334 664 2 4442 11 11111122223
Q ss_pred CChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceeeecCCC-----HHH
Q 015283 295 PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGLN-----KAQ 367 (410)
Q Consensus 295 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~-----~~~ 367 (410)
.+.+++.++...|+.- .+ +...++++++++++.+.|+ ++. .+..+....+. |.+.++.+. .++
T Consensus 356 ~~~~~~aaa~aal~~~------~~--~~~~~~~~~~~~~l~~~L~-~l~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~ 425 (472)
T 1ohv_A 356 GDPSKNLLLAEVINII------KR--EDLLSNAAHAGKVLLTGLL-DLQARYPQFISRVRGR-GTFCSFDTPDESIRNKL 425 (472)
T ss_dssp SCHHHHHHHHHHHHHH------HH--TTHHHHHHHHHHHHHHHHH-HHHHHCTTTCEEEEEE-TTEEEEECSSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH------Hh--CCHHHHHHHHHHHHHHHHH-HHHhhCCCcEEeecCC-ceEEEEEeCChhHHHHH
Confidence 4555555554443310 11 2345677777777777776 552 11102223344 444444442 235
Q ss_pred HHHhhhcCcEEEcCCC----eEEecC-CCcccHHHHHHHHHHHhhhc
Q 015283 368 SDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 368 ~~~ll~~~gi~v~~~g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 409 (410)
+.++++ +||.+.|+| ||+++. .+++++++++++|++++.++
T Consensus 426 ~~~l~~-~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 426 ISIARN-KGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp HHHHHH-TTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHH-CCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 667766 699999864 886553 48999999999999998765
No 217
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=6.1e-20 Score=176.44 Aligned_cols=158 Identities=20% Similarity=0.096 Sum_probs=122.5
Q ss_pred cccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCCCc
Q 015283 77 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPW 152 (410)
Q Consensus 77 ~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~ 152 (410)
....++++.+++++... +.++ +++|++|+..+.. ..+.+||+|+++.++|.++...+ +..|.++
T Consensus 58 ~~~~~l~~~la~~~g~~-------~~v~---~~sGt~A~~~~l~--~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~ 125 (421)
T 2ctz_A 58 PTVDVLEKRLAALEGGK-------AALA---TASGHAAQFLALT--TLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEV 125 (421)
T ss_dssp HHHHHHHHHHHHHHTCS-------EEEE---ESSHHHHHHHHHH--HHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEE
T ss_pred hHHHHHHHHHHHHhCCC-------ceEE---ecCHHHHHHHHHH--HHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEE
Confidence 34589999999997432 2344 4667999998843 33779999999999999887665 6788888
Q ss_pred cce-eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCC
Q 015283 153 SEY-RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 231 (410)
Q Consensus 153 ~~v-~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 231 (410)
+.+ +. + |++++++.+++ +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|..++..
T Consensus 126 ~~~~~~---~----d~~~l~~~i~~---~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~--- 189 (421)
T 2ctz_A 126 RFTSRE---E----RPEEFLALTDE---KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYL--- 189 (421)
T ss_dssp EECCTT---C----CHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTS---
T ss_pred EEECCC---C----CHHHHHHhhcc---CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccc---
Confidence 887 65 1 78999998875 7788888999999999887 778888899999999999998344432
Q ss_pred CchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 232 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
.... . ...++++.|+||.++.+|.|+|++++
T Consensus 190 ~~~~------~-~~~Di~~~s~~K~l~~~g~~~G~~~~ 220 (421)
T 2ctz_A 190 LRPL------A-WGAALVTHSLTKWVGGHGAVIAGAIV 220 (421)
T ss_dssp CCGG------G-GTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred CCcc------c-cCCeEEEECCcccccCCCCcEEEEEE
Confidence 1111 1 13568899999999999999999854
No 218
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.85 E-value=2.3e-19 Score=171.46 Aligned_cols=170 Identities=12% Similarity=0.056 Sum_probs=127.4
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh----hhCCC
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 150 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~ 150 (410)
+.....++++.+++++.. ++.++ ++||++|+.++ +...+.+||+|+++.+.|.+....+ +..|.
T Consensus 80 ~~p~~~~le~~lA~l~g~--------~~~i~--~ssGt~Ai~~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~ 147 (415)
T 2fq6_A 80 GTLTHFSLQQAMCELEGG--------AGCVL--FPCGAAAVANS--ILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGV 147 (415)
T ss_dssp CCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred CCchHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 445567899999999632 23455 68999999887 3444679999999999998876543 45688
Q ss_pred CccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH--cCCcccccccCCCCCCC
Q 015283 151 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASG 228 (410)
Q Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~ 228 (410)
++..++. .|++++++.+++ +++++++++|+||||.+.+ +++|+++|++ +|+++|+|++|......
T Consensus 148 ~v~~v~~-------~d~~~le~ai~~---~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~ 214 (415)
T 2fq6_A 148 TTSWFDP-------LIGADIVKHLQP---NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF 214 (415)
T ss_dssp EEEEECT-------TCGGGGGGGCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS
T ss_pred EEEEECC-------CCHHHHHHhhcc---CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC
Confidence 8777764 278889888874 6888888999999999875 6678888999 99999999998754321
Q ss_pred CCCCchhHhHHHhhcCCcEEEEecccccccccCCC-cceEEEEeCCchhHHHHHHH
Q 015283 229 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVKSQ 283 (410)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r-~G~l~~~~~~~~~~~~~~~~ 283 (410)
. ++ ..+.++++.|+||.++.+|.+ +||++. ++++++++...
T Consensus 215 ----~--p~-----~~g~Div~~S~sK~lg~~g~~~~G~l~~---~~~~~~~l~~~ 256 (415)
T 2fq6_A 215 ----K--AL-----DFGIDVSIQAATKYLVGHSDAMIGTAVC---NARCWEQLREN 256 (415)
T ss_dssp ----C--GG-----GGTCSEEEEETTTTTTCSSSCCCEEEEE---CTTTHHHHHHH
T ss_pred ----C--cc-----ccCCeEEEEeCccccCCCCCceEEEEEe---CHHHHHHHHHH
Confidence 1 11 123578899999999988866 477643 56666666553
No 219
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.85 E-value=1.1e-20 Score=184.73 Aligned_cols=328 Identities=9% Similarity=-0.067 Sum_probs=210.9
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC--------CceEEEecCChhhHHHHHHHHHHHh
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE--------QRVATVQGLSGTGSLRLAAALIERY 125 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~--------~~i~~~~t~ggt~a~~~~~~~~~~~ 125 (410)
+..+.+.+...++... ..|....+..++++.+++|+.+.+|.+... ...++ |+|||+++..+....+..
T Consensus 92 ~~~~~~~~~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~--~~ggt~an~~al~~ar~~ 168 (481)
T 4e1o_A 92 PSLLGDMLADAINCLG-FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVL--QSTVSESTLIALLAARKN 168 (481)
T ss_dssp HHHHHHHHHHHHCCCC-SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEE--ESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc-CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEE--eCchHHHHHHHHHHHHHH
Confidence 4556666777776544 678777889999999999987776664322 24567 899999998875444321
Q ss_pred -----------------CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEE
Q 015283 126 -----------------FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 185 (410)
Q Consensus 126 -----------------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii 185 (410)
.+++.|++++++|..+...+...|.+++.+|+ ++++.+|+++|++.+.+. +..+.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~--~~~~~~d~~~Le~~i~~~~~~g~~~~~vv 246 (481)
T 4e1o_A 169 KILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPV--DDNFSLRGEALQKAIEEDKQRGLVPVFVC 246 (481)
T ss_dssp HHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECC--CTTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEc--CCCCcCCHHHHHHHHHHHHhCCCCcEEEE
Confidence 25789999999999999988888999999987 467889999999998752 12266677
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCc
Q 015283 186 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERI 264 (410)
Q Consensus 186 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~ 264 (410)
.+.++|+||. .+++++|+++|++||+++++|++|....... + ..+... .....+.+..+.+|.++.| ...
T Consensus 247 ~~~~~t~~G~---id~l~~I~~la~~~~~~lhvDaA~g~~~~~~---~--~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~ 317 (481)
T 4e1o_A 247 ATLGTTGVCA---FDCLSELGPICAREGLWLHIDAAYAGTAFLC---P--EFRGFLKGIEYADSFTFNPSKWMMVH-FDC 317 (481)
T ss_dssp EEBSCTTTCC---BCCHHHHHHHHHHHTCEEEEECTTGGGGGGS---G--GGGGGGTTGGGCSEEEECHHHHSSCC-SSC
T ss_pred EecCCCCCcC---cCCHHHHHHHHHHcCCeEEeehhhHHHHHhC---h--hhHHHhcCcccCCEEEEChHHhcCCC-Cce
Confidence 7889999998 4678889999999999999999987654210 1 111111 1112355667999998765 446
Q ss_pred ceEEEEeCCchhHHHHHHHHHhhccCc--------------cc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 015283 265 GAMNVVCSSSDLAARVKSQLKRLARPM--------------YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 329 (410)
Q Consensus 265 G~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 329 (410)
|++ ..+++....+.......+.... .+ ....+.+.++...+. .+.++++.++..+
T Consensus 318 g~l--~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g--------~~g~~~~~~~~~~ 387 (481)
T 4e1o_A 318 TGF--WVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG--------VKNLQAHVRHGTE 387 (481)
T ss_dssp EEE--EESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH--------HHHHHHHHHHHHH
T ss_pred EEE--EEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH--------HHHHHHHHHHHHH
Confidence 776 4445442221100000011000 00 011223333333321 2345677888899
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceeeecCC------CHHHHHHhhhcCcEEEcCC---C----eEEecC--CCccc
Q 015283 330 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------NKAQSDNMTNKWHVYMTKD---G----RISLAG--LSLAK 394 (410)
Q Consensus 330 ~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~v~~~---g----Ris~~~--~~~~~ 394 (410)
+++++.+.|+ +.+. +++..+....++++.+ +.++.+++.++..+++.|. | ||++.+ .++++
T Consensus 388 ~a~~l~~~L~-~~~g---~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~d 463 (481)
T 4e1o_A 388 MAKYFESLVR-NDPS---FEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDD 463 (481)
T ss_dssp HHHHHHHHHH-TCTT---EECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHH
T ss_pred HHHHHHHHHh-cCCC---eEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHH
Confidence 9999999998 7631 4544333333333322 2345666666533444432 3 998764 26789
Q ss_pred HHHHHHHHHHHhhhc
Q 015283 395 CEYLADAIIDSYHNV 409 (410)
Q Consensus 395 i~~~~~~l~~~l~~~ 409 (410)
+++++++|+++++++
T Consensus 464 i~~~~~~i~~~~~~l 478 (481)
T 4e1o_A 464 ILRDWNLIRDAATLI 478 (481)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987653
No 220
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.84 E-value=1.3e-19 Score=178.71 Aligned_cols=325 Identities=14% Similarity=0.046 Sum_probs=198.5
Q ss_pred cHHHHH-HHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-----C-
Q 015283 54 LDVVKK-AENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-----F- 126 (410)
Q Consensus 54 ~~~v~~-a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-----~- 126 (410)
+..+.. .+....+.. ...|....+..++.+.+.+++.+..|.+ .+++++ ++|||+|+.++....+.. .
T Consensus 121 ~~~~~~~~l~~~~n~~-~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~--t~ggtea~~~al~~ar~~~~~~~~~ 195 (515)
T 2jis_A 121 PHALAGRIITESLNTS-QYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIF--CPGGSISNMYAVNLARYQRYPDCKQ 195 (515)
T ss_dssp HHHHHHHHHHHHHCCC-TTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEE--ESSHHHHHHHHHHHHHHHHCTTHHH
T ss_pred HHHHHHHHHHHHhccC-CCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEE--cCCcHHHHHHHHHHHHHHHhhHHhh
Confidence 444443 344433332 2456555565566666555554444443 578888 999999988875444321 2
Q ss_pred CCC------EEEEcCCCCcchhhhhhhCCC---CccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEeCCCCCCCC
Q 015283 127 PGA------KVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTG 194 (410)
Q Consensus 127 ~gd------~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~~~p~NPtG 194 (410)
+|| .|+++++.|..+...++..|. +++.+|+ ++++.+|++.|++.+.+. +.++.++++++|+||||
T Consensus 196 ~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG 273 (515)
T 2jis_A 196 RGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKA--DERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLG 273 (515)
T ss_dssp HCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB--CTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTC
T ss_pred cCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEec--CCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCC
Confidence 576 899999999999988888887 7888887 346789999999998751 22477888899999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCc
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 274 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~ 274 (410)
.+.+ +++|+++|++||+++++|++|..+.... +.... .+......++++.|++|.++.| .++|+++ ++++
T Consensus 274 ~i~~---l~~I~~la~~~g~~l~vD~a~~~~~~~~---~~~~~-~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~--~~~~ 343 (515)
T 2jis_A 274 AFDP---LEAIADVCQRHGLWLHVDAAWGGSVLLS---QTHRH-LLDGIQRADSVAWNPHKLLAAG-LQCSALL--LQDT 343 (515)
T ss_dssp CBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGC---TTTGG-GGTTGGGCSEEEECTTSTTCCC-SCCEEEE--ESCC
T ss_pred CccC---HHHHHHHHHHcCCeEEEehhhhhHHHhC---hhhHh-hcCCCccCCEEEECcccccCCC-CCeeEEE--EeCh
Confidence 9654 7788888999999999999988776421 11110 1111113457888999998744 5689984 4555
Q ss_pred -hhHHHHH----HHHHhhcc--------Cccc-----CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015283 275 -DLAARVK----SQLKRLAR--------PMYS-----NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 336 (410)
Q Consensus 275 -~~~~~~~----~~~~~~~~--------~~~~-----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (410)
++.++.. .++..... ..+. ....+.+.++...+. .+.+++..++..++++++.+
T Consensus 344 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg--------~~g~~~~~~~~~~~a~~l~~ 415 (515)
T 2jis_A 344 SNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG--------DQGLERRIDQAFVLARYLVE 415 (515)
T ss_dssp SCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHH
Confidence 4444321 11110000 0000 001222222222221 23356778888899999999
Q ss_pred HhhhccCCCCCccccc-CCcceeeec--C--C-----CHH-----------HHHHhhhcCcEEE-c----CC--C--eEE
Q 015283 337 SLSAKDKSGKDWSFIL-RQIGMFSFT--G--L-----NKA-----------QSDNMTNKWHVYM-T----KD--G--RIS 386 (410)
Q Consensus 337 ~l~~~~g~~~~~~~~~-~~~~~~~~~--~--~-----~~~-----------~~~~ll~~~gi~v-~----~~--g--Ris 386 (410)
.|+ +.+. +++.. +..+.+.|. + + ..+ ....+.+ .|+.. . ++ + |++
T Consensus 416 ~L~-~~~g---~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~-~G~~~~~~~~~~~~~~~lRis 490 (515)
T 2jis_A 416 EMK-KREG---FELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVK-EGSMMIGYQPHGTRGNFFRVV 490 (515)
T ss_dssp HHH-TSTT---EEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHH-HTSCEEEEEEETTEEEEEEEE
T ss_pred HHh-cCCC---EEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHh-cCCEEEEEEEECCceEEEEEE
Confidence 998 7631 34332 333444441 1 0 011 2344544 47543 2 23 2 999
Q ss_pred ec-C-CCcccHHHHHHHHHHHhhh
Q 015283 387 LA-G-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 387 ~~-~-~~~~~i~~~~~~l~~~l~~ 408 (410)
++ . .|+++++++++.|++++++
T Consensus 491 ~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 491 VANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCCHHHHHHHHHHHHHHHhh
Confidence 84 2 3889999999999998765
No 221
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.84 E-value=2.6e-19 Score=170.47 Aligned_cols=152 Identities=15% Similarity=0.123 Sum_probs=118.1
Q ss_pred ccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHH-----Hh
Q 015283 51 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-----RY 125 (410)
Q Consensus 51 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~-----~~ 125 (410)
+.+++.+.+++.+.+... .|.+..+..++++++++++.. ++.++ +++|++++..+...+. .+
T Consensus 11 ~~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~sGt~a~~~al~~~~~~~~~~~ 77 (390)
T 3b8x_A 11 STWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFGS--------KYAVM--VSSGSTANLLMIAALFFTKKPRL 77 (390)
T ss_dssp CCCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHHHHHTTSSSSCSC
T ss_pred CCCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHCC--------CcEEE--ECCHHHHHHHHHHHHHhhhhcCC
Confidence 455788999988877542 355677899999999999743 24555 7888899888732221 15
Q ss_pred CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 126 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i 205 (410)
.+||+|+++.|+|..+...+...|++++.+++. ++++.+|++++++.+++ ++++++++ |++|.. .++++|
T Consensus 78 ~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~~~---~~~g~~---~~~~~i 147 (390)
T 3b8x_A 78 KKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDID-INTLNIDIESLKEAVTD---STKAILTV---NLLGNP---NNFDEI 147 (390)
T ss_dssp CTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC-TTTCSBCHHHHHHHCCT---TEEEEEEE---CGGGCC---CCHHHH
T ss_pred CCcCEEEECCCCcHHHHHHHHHcCCEEEEEecC-ccccCcCHHHHHHHhCc---CCeEEEEE---CCccCh---hhHHHH
Confidence 689999999999999999999999999999884 33578999999999875 56666654 355653 578888
Q ss_pred HHHHHHcCCcccccccCCCC
Q 015283 206 ADVIQEKNHIPFFDVAYQGF 225 (410)
Q Consensus 206 ~~~~~~~~~~li~Deay~~~ 225 (410)
.++|+++|+++|+|++|...
T Consensus 148 ~~l~~~~~~~li~D~a~~~g 167 (390)
T 3b8x_A 148 NKIIGGRDIILLEDNCESMG 167 (390)
T ss_dssp HHHHTTSCCEEEEECTTCTT
T ss_pred HHHHHHcCCEEEEECcCccc
Confidence 88999999999999998743
No 222
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.84 E-value=2.5e-20 Score=181.66 Aligned_cols=327 Identities=11% Similarity=-0.002 Sum_probs=206.5
Q ss_pred cHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccC-------CceEEEecCChhhHHHHHHHHHHHh-
Q 015283 54 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-------QRVATVQGLSGTGSLRLAAALIERY- 125 (410)
Q Consensus 54 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~-------~~i~~~~t~ggt~a~~~~~~~~~~~- 125 (410)
+..+.+.+...++... ..|....+..++++++++|+.+..|.+.+. ...++ |+|||+++.++....+..
T Consensus 87 ~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~--t~ggt~anl~al~~ar~~~ 163 (475)
T 3k40_A 87 PAIVADMLSGAIACIG-FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVI--QGTASESTLVALLGAKAKK 163 (475)
T ss_dssp HHHHHHHHHHHHCCCS-SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEE--ESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc-cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEE--cCchHHHHHHHHHHHHHHH
Confidence 3455566666665543 667777888999999999987777764321 25677 899999988774443221
Q ss_pred ----------------CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcC---CCCcEEEEe
Q 015283 126 ----------------FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLH 186 (410)
Q Consensus 126 ----------------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~~ii~ 186 (410)
.+++.|++++++|..+...+...|.+++.+|+ ++++ +|+++|++.+.+. +..+.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~--d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~ 240 (475)
T 3k40_A 164 LKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQS--ENHR-MRGAALEKAIEQDVAEGLIPFYAVV 240 (475)
T ss_dssp HHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECC--BTTB-CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEEC--CCCC-cCHHHHHHHHHHHHHCCCccEEEEE
Confidence 13468999999999999999999999999998 3456 9999999998752 122566777
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHh-hcCCcEEEEecccccccccCCCcc
Q 015283 187 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIG 265 (410)
Q Consensus 187 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G 265 (410)
+.++|+||.+ +++++|+++|++||+++++|++|...... .+ ..+... .....+.+..+.+|.++.| ..+|
T Consensus 241 ~~~~t~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~~---~~--~~~~~~~gi~~~Ds~~~~~hK~l~~p-~g~g 311 (475)
T 3k40_A 241 TLGTTNSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAFI---CP--EYRHLMKGIESADSFNFNPHKWMLVN-FDCS 311 (475)
T ss_dssp EBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGG---SG--GGGGGGTTGGGCSEEEECHHHHSSCC-SSCE
T ss_pred EecCCCCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHHh---CH--hhHHHhcCcccCCEEEECchhccCCC-CceE
Confidence 8899999994 67888899999999999999998764321 00 111111 1112356778999988644 5567
Q ss_pred eEEEEeCCchhHHHHHHHHHhhccC----------ccc--CC---ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 015283 266 AMNVVCSSSDLAARVKSQLKRLARP----------MYS--NP---PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 330 (410)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~--~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 330 (410)
++ ..++++...+.......+... .+. .. ..+.+.++...+. .+.++++.++..++
T Consensus 312 ~l--~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g--------~~g~~~~~~~~~~~ 381 (475)
T 3k40_A 312 AM--WLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG--------VENLQAHIRRHCNF 381 (475)
T ss_dssp EE--EESSGGGC---------------------------CCCGGGTHHHHHHHHHHHH--------HHHHHHHHHHHHHH
T ss_pred EE--EEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh--------HHHHHHHHHHHHHH
Confidence 77 445554322111111111100 000 00 1222222222221 23456788888999
Q ss_pred HHHHHHHhhhccCCCCCcccccC-Ccceeee--cCC---CHHHHHHhhhcCcEEEcCC---C----eEEecC--CCcccH
Q 015283 331 RQKLFDSLSAKDKSGKDWSFILR-QIGMFSF--TGL---NKAQSDNMTNKWHVYMTKD---G----RISLAG--LSLAKC 395 (410)
Q Consensus 331 ~~~l~~~l~~~~g~~~~~~~~~~-~~~~~~~--~~~---~~~~~~~ll~~~gi~v~~~---g----Ris~~~--~~~~~i 395 (410)
++++.+.|+ +++. +++..+ ..++..| .+. +.++.+++.++.++++.|. | |+++.+ .+++++
T Consensus 382 a~~l~~~L~-~~~g---~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di 457 (475)
T 3k40_A 382 AKQFGDLCV-ADSR---FELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDM 457 (475)
T ss_dssp HHHHHHHHH-HSTT---EEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHH
T ss_pred HHHHHHHHh-cCCC---EEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHH
Confidence 999999998 7731 444433 3333322 122 2345667766544444432 3 999764 378999
Q ss_pred HHHHHHHHHHhhhc
Q 015283 396 EYLADAIIDSYHNV 409 (410)
Q Consensus 396 ~~~~~~l~~~l~~~ 409 (410)
++++++|+++.+++
T Consensus 458 ~~~~~~i~~~~~~~ 471 (475)
T 3k40_A 458 EYSWKEVSAAADEM 471 (475)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987653
No 223
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.83 E-value=1.1e-19 Score=173.96 Aligned_cols=331 Identities=13% Similarity=0.055 Sum_probs=198.6
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 113 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~ 113 (410)
...||+..|.--...|+. +|.+.+++.+++.... +...+..-..++.+.+++.+.. .+.+.+ +++|++
T Consensus 87 ~~ylD~~~g~~~~~lGH~--hp~v~~Av~~q~~~~~-~~~~~~~~~~~lae~l~~~~p~-------~~~v~f--~~SGsE 154 (454)
T 4ao9_A 87 HRYADFIAEYTAGVYGHS--APEIRDAVIEAMQGGI-NLTGHNLLEGRLARLICERFPQ-------IEQLRF--TNSGTE 154 (454)
T ss_dssp CEEEESSGGGGTTTTCSC--CHHHHHHHHHHHHTCS-CCCSEESSHHHHHHHHHHHSTT-------CSEEEE--ESSHHH
T ss_pred CEEEEccccHHhhcccCC--CHHHHHHHHHHHhcCC-CccCCcHHHHHHHHHHHHhCCC-------CCEEEE--eCchHH
Confidence 467888777543455654 5899999988886543 2222333455788888887532 478989 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhh-CCCCccc--eeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCC
Q 015283 114 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARVPWSE--YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 190 (410)
Q Consensus 114 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~--v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~ 190 (410)
|++.+.++.+.+...++|+..+.+|.+....... .+..... +...+. .|++.+++.+.++++...+|++...+
T Consensus 155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~----nd~~~l~~~l~~~~~~iAavIvEPv~ 230 (454)
T 4ao9_A 155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY----NDAQTARAQIERHGPEIAVVLVEPMQ 230 (454)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT----TCHHHHHHHHHHTGGGEEEEEECSEE
T ss_pred HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC----chHHHHHHHHhhcCCceEEEEecccc
Confidence 9999988887776668999999888765432221 1111111 111112 37889999998766667777766667
Q ss_pred CCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEE
Q 015283 191 NPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 269 (410)
Q Consensus 191 NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~ 269 (410)
...|.+.+ ++-|++|.++|++||+++|.||++.+ ..+ ..+.... .+-.++++ +++|.+| .|+.+|++.+
T Consensus 231 g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G----~~~a~e~-~gv~PDi~---t~gK~lg-gG~Piga~~~ 300 (454)
T 4ao9_A 231 GASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLA----PHGLANK-LGIRSDLT---TLGKYIG-GGMSFGAFGG 300 (454)
T ss_dssp STTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGS----TTCHHHH-HTCCCSEE---EEEGGGG-TTSSCEEEEE
T ss_pred CCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCc----cccchhc-cCCCCcEE---EeccccC-CCCcceeeee
Confidence 77787654 55599999999999999999999763 211 1112212 22334554 6899998 7899999755
Q ss_pred EeCCchhHHHHHHHHHhh-ccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---hcc
Q 015283 270 VCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS---AKD 342 (410)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---~~~ 342 (410)
++++.+.+....... ...+++ .+.++..++ ...+.++++ .++++++.++|.+.|+ ++.
T Consensus 301 ---~~ei~~~~~~~~~~~~h~~T~~-gnPla~AAala~L~~l~~~~~-----------~~~~~~~g~~l~~~L~~l~~~~ 365 (454)
T 4ao9_A 301 ---RADVMALFDPRTGPLAHSGTFN-NNVMTMAAGYAGLTKLFTPEA-----------AGALAERGEALRARLNALCANE 365 (454)
T ss_dssp ---CHHHHGGGCTTTCSCCCCCTTT-TCHHHHHHHHHHHHHTSCHHH-----------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhhccCCccccCCCC-CCHHHHHHHHHHHHHHhccCh-----------hHHHHHHHHHHHHHHHHHHhhC
Confidence 777544432211111 122333 333333333 344555433 2333334444444333 023
Q ss_pred CCCCCcccccCCcceee--ec-----------CCCH----HHHHHhhhcCcEEEcCCCeEEecC-CCcccHHHHHHHHHH
Q 015283 343 KSGKDWSFILRQIGMFS--FT-----------GLNK----AQSDNMTNKWHVYMTKDGRISLAG-LSLAKCEYLADAIID 404 (410)
Q Consensus 343 g~~~~~~~~~~~~~~~~--~~-----------~~~~----~~~~~ll~~~gi~v~~~gRis~~~-~~~~~i~~~~~~l~~ 404 (410)
+... .+...+.++. |. ..+. .++..+++ .||++.|.+++.++. +|++||++++++|++
T Consensus 366 ~~~~---~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~Gv~~~p~~~~~~s~~~T~~dId~~l~al~~ 441 (454)
T 4ao9_A 366 GVAM---QFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLN-EDIYSSPRGFVVLSLPLTDADIDRYVAAIGS 441 (454)
T ss_dssp TBSC---EEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHH-TTEECCTTCEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCE---EEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHH-CCEEEcCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 3211 1111222221 11 1122 23456666 599999999665432 599999999999999
Q ss_pred Hhhhc
Q 015283 405 SYHNV 409 (410)
Q Consensus 405 ~l~~~ 409 (410)
++.++
T Consensus 442 ~l~~~ 446 (454)
T 4ao9_A 442 FIGGH 446 (454)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 98764
No 224
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.82 E-value=2.4e-19 Score=173.34 Aligned_cols=277 Identities=11% Similarity=0.016 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhh----hCCCCccce
Q 015283 80 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVPWSEY 155 (410)
Q Consensus 80 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v 155 (410)
.++++.+++++ |. +++++.+ +.|++.+.+.+...+ .+.+||+|++++++|+.+...++ ..|++++.+
T Consensus 111 ~~~~~~la~~~----g~--~~~~i~~--~~g~taa~ea~~~a~-~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v 181 (438)
T 1wyu_A 111 FEYQTMIAELA----GL--EIANASM--YDGATALAEGVLLAL-RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL 181 (438)
T ss_dssp HHHHHHHHHHH----TS--SEECSCB--SSHHHHHHHHHHHHH-HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHh----CC--CccceEE--eCcHHHHHHHHHHHH-hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEE
Confidence 46666666664 32 2456777 888885555542222 35689999999999999876554 489999888
Q ss_pred eeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchh
Q 015283 156 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 235 (410)
Q Consensus 156 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~ 235 (410)
+. +++.+|+++ +. ++++++++++| ||||.+. ++++|+++|+++|+++++|..-..++. ...
T Consensus 182 ~~---~~~~~d~~~----i~---~~t~~v~i~~p-n~tG~~~---~l~~i~~la~~~g~~vivd~d~~a~g~--~~~--- 242 (438)
T 1wyu_A 182 PL---EGGRTPLPE----VG---EEVGAVVVQNP-NFLGALE---DLGPFAEAAHGAGALFVAVADPLSLGV--LKP--- 242 (438)
T ss_dssp CC---BTTBCCCCC----CC---TTEEEEEEESS-CTTSBCC---CHHHHHHHHHHTTCEEEEECCTTGGGT--BCC---
T ss_pred cC---cCCccCHHH----hC---CCeEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEechhhccC--cCC---
Confidence 86 235677776 43 36788888889 9999976 577888889999999995532111221 101
Q ss_pred HhHHHhhcCCcEEEEecccccc----cccCCCcceEEEEeCCchhHHHHHHHH-----------------------Hhhc
Q 015283 236 SVRLFATRGMELLVAQSYSKNL----GLYAERIGAMNVVCSSSDLAARVKSQL-----------------------KRLA 288 (410)
Q Consensus 236 ~~~~~~~~~~~~i~~~S~sK~~----~~~G~r~G~l~~~~~~~~~~~~~~~~~-----------------------~~~~ 288 (410)
. ... +.+++++| +|.| ++.|.|+||+++ ++++.+++.... ....
T Consensus 243 ~----~~~-g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~ 313 (438)
T 1wyu_A 243 P----GAY-GADIAVGD-GQSLGLPMGFGGPHFGFLAT---KKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRA 313 (438)
T ss_dssp H----HHH-TCSEEEEE-CTTTTCCCGGGCSCCEEEEE---CGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGG
T ss_pred C----ccC-CCCEEEEC-CcccCCCccCCCCCeeEEEE---cHHHHHhCCCceeccccccCCCcceeeeccccccccchh
Confidence 1 111 23455666 6654 356778999855 666544331100 0000
Q ss_pred cCcccCC---ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceee--ec-
Q 015283 289 RPMYSNP---PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFS--FT- 361 (410)
Q Consensus 289 ~~~~~~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~--~~- 361 (410)
.. +.+. ..+.+..+...+.. + -.+.++++.++++++++++.+.|+ ++ | +++..+. .+|. .+
T Consensus 314 ~~-t~~~~~~~~~~a~~aa~~l~~--~---~~~g~~~~~~~~~~~~~~l~~~L~-~~~g----~~~~~~~-~~~~~~~~~ 381 (438)
T 1wyu_A 314 KA-KSNITTNAQLTALMGAMYLAA--L---GPEGLREVALKSVEMAHKLHALLL-EVPG----VRPFTPK-PFFNEFALA 381 (438)
T ss_dssp GS-SCCCCSCCHHHHHHHHHHHHH--H---HHHHHHHHHHHHHHHHHHHHHHHT-TSTT----CEECSCS-SBCSEEEEE
T ss_pred cc-cCCccchHHHHHHHHHHHHHH--h---CHHHHHHHHHHHHHHHHHHHHHHh-cCCC----eEECCCC-CeEEEEEEe
Confidence 11 1111 22222111111110 0 023356788889999999999998 87 5 3444432 2332 12
Q ss_pred -CCCH-HHHHHhhhcCcEEE--cCC-----C--eEEecC-CCcccHHHHHHHHHHHh
Q 015283 362 -GLNK-AQSDNMTNKWHVYM--TKD-----G--RISLAG-LSLAKCEYLADAIIDSY 406 (410)
Q Consensus 362 -~~~~-~~~~~ll~~~gi~v--~~~-----g--Ris~~~-~~~~~i~~~~~~l~~~l 406 (410)
+.+. ++.++|.+ +||.+ .++ + |||+.. .+++++++++++|++++
T Consensus 382 ~~~~~~~~~~~L~~-~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 382 LPKDPEAVRRALAE-RGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CSSCHHHHHHHHHH-TTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHH-CCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 2343 45666665 59988 443 3 999873 38899999999999875
No 225
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.82 E-value=3.7e-19 Score=180.06 Aligned_cols=176 Identities=11% Similarity=-0.044 Sum_probs=120.4
Q ss_pred CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCCCcc
Q 015283 75 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS 153 (410)
Q Consensus 75 ~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~ 153 (410)
+..-+.++++.+|+++... ..+++ ++|+++++..+ +.+.+.+||+|+++.++|.++... +...|++++
T Consensus 171 ~~~~i~e~e~~lA~~~gae-------~~i~v--~nGtt~an~~a--i~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v 239 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNAD-------KTYFV--LGGSSNANNTV--TSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPV 239 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCS-------EEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEE
T ss_pred ChHHHHHHHHHHHHHHCCC-------cEEEE--CCHHHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEE
Confidence 4445689999999996332 33666 78888999888 455578999999999999988877 888899988
Q ss_pred ceeeecCCC----cccChhhH-----HHHHhcCCCC---c----EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccc
Q 015283 154 EYRYYDPKT----VGLDFEGM-----IADIKAAPGG---S----FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 154 ~v~~~~~~~----~~~d~~~l-----~~~i~~~~~~---~----~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 217 (410)
.++... +. +.+|++++ ++.+.+.++. + +++++++| ||||.+. ++++|+++|+++|++++
T Consensus 240 ~v~~~~-~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~---dl~~I~~la~~~g~~li 314 (730)
T 1c4k_A 240 YLQTNR-NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIY---NAHEVVKRIGHLCDYIE 314 (730)
T ss_dssp EECEEE-CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEE---CHHHHHHHHGGGBSEEE
T ss_pred EEeCCc-cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeec---CHHHHHHHHHHcCCeEE
Confidence 887642 22 33788888 8888752101 2 55666777 6899965 57788888999999999
Q ss_pred ccccCCCC-CCCCCCCchhHhHH--HhhcCCcEEEEecccccccccCCCcceEE
Q 015283 218 FDVAYQGF-ASGSLDNDASSVRL--FATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 218 ~Deay~~~-~~~~~~~~~~~~~~--~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
+|++|... .+++.......+.. +....++++++.|+||.+ +|++.|+++
T Consensus 315 vDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I 366 (730)
T 1c4k_A 315 FDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQI 366 (730)
T ss_dssp EECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEE
T ss_pred EEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEE
Confidence 99998643 22210000001100 011123679999999986 467666553
No 226
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.79 E-value=2e-18 Score=176.16 Aligned_cols=174 Identities=13% Similarity=0.078 Sum_probs=119.4
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccce
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEY 155 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v 155 (410)
..-+.++++.+++++.. .+.+++ ++|+++++.++ +.+.+.+||+|+++.|+|.++...+...|++++.+
T Consensus 204 ~g~v~~~ee~la~l~G~-------d~~i~~--~~Gtt~a~~~~--i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v 272 (755)
T 2vyc_A 204 TGAFGESEKYAARVFGA-------DRSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYM 272 (755)
T ss_dssp CHHHHHHHHHHHHHHTC-------SEEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEE
T ss_pred ccHHHHHHHHHHHHhCC-------CceEEE--CCcHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE
Confidence 34456778888887533 234666 78888888887 44557899999999999999988888899999888
Q ss_pred eeecCCCcc----c-----ChhhHHHHHhcCCCC-------cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccc
Q 015283 156 RYYDPKTVG----L-----DFEGMIADIKAAPGG-------SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 219 (410)
Q Consensus 156 ~~~~~~~~~----~-----d~~~l~~~i~~~~~~-------~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 219 (410)
+... ++++ + |++.+++.+++.++. ++++++++| ||||.+. ++++|+++|++||+++++|
T Consensus 273 ~~~~-~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~---dl~~I~~ia~~~~~~livD 347 (755)
T 2vyc_A 273 VPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFD 347 (755)
T ss_dssp CCCB-CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEE---CHHHHHHHHTTTCSEEEEE
T ss_pred eCCC-CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceec---CHHHHHHHHHHcCCEEEEE
Confidence 7642 2232 4 999999999753221 135555777 7999965 5778888899999999999
Q ss_pred ccCCCCC-CCCCCCchhHhHHH--hh-cCCcEEEEecccccccccCCCcceEE
Q 015283 220 VAYQGFA-SGSLDNDASSVRLF--AT-RGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 220 eay~~~~-~~~~~~~~~~~~~~--~~-~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
++|.... +.+...+...+ .. .+ ..++++++.|+||.+ +|.+.|+++
T Consensus 348 eA~~~~~~~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i 397 (755)
T 2vyc_A 348 EAWYGYARFNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLL--NALSQASYI 397 (755)
T ss_dssp CTTCTTGGGCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSS--SCCTTCEEE
T ss_pred CcCchhcccCcccCCcchh-cCCcCCccCCCeEEEECccccc--cCcCCeeee
Confidence 9987532 21100000111 11 11 234778999999986 467655543
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.77 E-value=1.5e-18 Score=163.64 Aligned_cols=320 Identities=13% Similarity=0.029 Sum_probs=188.6
Q ss_pred eeecCCCcccccHHHHHHHHHhhcc----CC----CccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChh
Q 015283 43 AYRTEELQPYVLDVVKKAENLMLER----GE----NKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 112 (410)
Q Consensus 43 ~~~~~~~~~~~~~~v~~a~~~~~~~----~~----~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt 112 (410)
.++|..++.++++.|++++.+.+.. +. ..+.. -..-+++.|+.+++++.... +++|+|. |+|||
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~-----~~evif~-t~~~T 101 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPS-----NYKVLFC-HGGGR 101 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCT-----TEEEEEE-ESCTT
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CceEEEE-cCCch
Confidence 4567778888899999998766522 10 01111 13457899999999985431 2457661 48999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcch--hhhhhhCCCCccceeee-cCCCcccChhhHHHHHhcCCCCcEEEEeCCC
Q 015283 113 GSLRLAAALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCA 189 (410)
Q Consensus 113 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p 189 (410)
++++++ +...+.+||+|++..-++... ...++..| ++..++.. ++++..++++.++..+++ +++++.+++.
T Consensus 102 ~a~n~a--i~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~---~t~lV~~~h~ 175 (386)
T 3qm2_A 102 GQFAGV--PLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSD---NAAYLHYCPN 175 (386)
T ss_dssp HHHHHH--HHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCT---TCSCEEECSE
T ss_pred HHHHHH--HHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCC---CCcEEEEECC
Confidence 999998 455577999987655443333 33455678 77777763 123333677777666653 6667777888
Q ss_pred CCCCCCC-CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEE
Q 015283 190 HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 268 (410)
Q Consensus 190 ~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~ 268 (410)
+|.||+. -+.+++ . +|+++++|.+ +.++..+.+.+ ..+ +.+.|..|.+|++| +|+++
T Consensus 176 et~tG~~i~pi~~i---~-----~g~~~~vDa~-qs~g~~pidv~---------~~~--~~~~s~hK~lGP~G--~g~l~ 233 (386)
T 3qm2_A 176 ETIDGIAIDETPDF---G-----PEVVVTADFS-STILSAPLDVS---------RYG--VIYAGAQKNIGPAG--LTLVI 233 (386)
T ss_dssp ETTTTEECCCCCCC---C-----TTCCEEEECT-TTTTSSCCCGG---------GCS--EEEEETTTTTCCTT--EEEEE
T ss_pred cCCcCEecCchhhh---c-----CCCEEEEEcc-cccCCCCCCcc---------ccC--EEEEecccccCCCc--cEEEE
Confidence 8888995 554443 2 7999999999 55553222221 112 35588999999887 47775
Q ss_pred EEeCCchhHHHHH----------HHHHhhccCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 015283 269 VVCSSSDLAARVK----------SQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDS 337 (410)
Q Consensus 269 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 337 (410)
+ +++..+++. .......+ +.+++..+..++...++ +. ... .++++.++.+++++++.+.
T Consensus 234 v---~~~~~~~~~~~~p~~~~~~~~~~~~~~--~gTp~v~~i~~l~~Al~---~~--~~~gG~~~i~~~~~~l~~~l~~~ 303 (386)
T 3qm2_A 234 V---REDLLGKAHESCPSILDYTVLNDNDSM--FNTPPTFAWYLSGLVFK---WL--KAQGGVAAMHKINQQKAELLYGV 303 (386)
T ss_dssp E---EGGGCSCCCTTSCGGGCHHHHHHC---------CCSHHHHHHHHHH---HH--HHHTHHHHHHHHHHHHHHHHHHH
T ss_pred E---CHHHHhhhcccCCcHHHHHHHhhcCCC--CCCCcHHHHHHHHHHHH---HH--HHhcCHHHHHHHHHHHHHHHHHH
Confidence 5 444322111 11111111 12233332222222221 11 012 3578888999999999999
Q ss_pred hhhccCCCCCc-ccccCCcce--eeecC--CCHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHH
Q 015283 338 LSAKDKSGKDW-SFILRQIGM--FSFTG--LNKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDS 405 (410)
Q Consensus 338 l~~~~g~~~~~-~~~~~~~~~--~~~~~--~~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~ 405 (410)
|+ ++++-... .......+. |.+.+ ++..+... ++++||.+.+| | |+|+.. .|+++++++++.|+++
T Consensus 304 l~-~~~~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~-L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~ 381 (386)
T 3qm2_A 304 ID-NSDFYRNDVAQANRSRMNVPFQLADNTLDKVFLEE-SFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDF 381 (386)
T ss_dssp HH-TCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHH-HHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HH-HCCCcccCCCHHHcCceEEEEECCCccccHHHHHH-HHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 98 87631000 000111122 22222 34344555 45679999876 2 999875 4899999999999998
Q ss_pred hhh
Q 015283 406 YHN 408 (410)
Q Consensus 406 l~~ 408 (410)
.++
T Consensus 382 ~~~ 384 (386)
T 3qm2_A 382 ERR 384 (386)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 228
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.75 E-value=4e-18 Score=159.75 Aligned_cols=310 Identities=13% Similarity=0.043 Sum_probs=187.8
Q ss_pred CcccccHHHHHHHHHhhccC----CC----ccCcC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEec-CChhhHHHH
Q 015283 49 LQPYVLDVVKKAENLMLERG----EN----KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGTGSLRL 117 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~~----~~----~~y~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t-~ggt~a~~~ 117 (410)
+..++|+.|.+++.+.+... .. ++..+ ..-+.+.|+.+++++.... +++|+| + .|||+++++
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~-----~~evif--~t~~~T~a~n~ 92 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPD-----NYKVIF--LQGGGCGQFSA 92 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCT-----TEEEEE--ESSHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CCeEEE--EcCchHHHHHH
Confidence 45567899999998876321 00 01110 1235678888888875431 246776 5 789999999
Q ss_pred HHHHHHHhCC--CCEEEEcCCCCcch--hhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 118 AAALIERYFP--GAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 118 ~~~~~~~~~~--gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
+ +...+.+ ||+|++...++... ...++..|..++.++. ++++..+++.++..++ ++++++.+++.+|.|
T Consensus 93 a--~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~--~~~~~~~~~~~~~~i~---~~t~lV~~~h~et~t 165 (377)
T 3e77_A 93 V--PLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPK--LGSYTKIPDPSTWNLN---PDASYVYYCANETVH 165 (377)
T ss_dssp H--HHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCC--CSSSCSCCCGGGCCCC---TTCSCEEEESEETTT
T ss_pred H--HHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEecc--CCCcCCCCChHHhccC---CCccEEEEeCccCch
Confidence 8 4444544 99998776655433 3355677876666665 3344566666655454 356666777788889
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 273 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~ 273 (410)
|+..|. +|+++|+++++|.+ +.++..+.+.+ ..+ +++.|..|.+|++|+ |++++ +
T Consensus 166 G~~~pi--------i~~~~~~~~~vD~~-q~~g~~~id~~---------~~~--~~~~s~~K~~gp~G~--g~l~~---~ 220 (377)
T 3e77_A 166 GVEFDF--------IPDVKGAVLVCDMS-SNFLSKPVDVS---------KFG--VIFAGAQKNVGSAGV--TVVIV---R 220 (377)
T ss_dssp TEECSS--------CCCCTTCCEEEECT-TTTTSSCCCGG---------GCS--EEEEEGGGTTSCTTC--EEEEE---E
T ss_pred heEchh--------hhccCCCEEEEEcc-cccCCCCCchh---------hcC--EEEEecccccCCCcc--EEEEE---c
Confidence 998875 36789999999999 55553222221 112 366888999998885 77754 4
Q ss_pred chhHHHHH-------HHHHhhc-cCcccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcc-C
Q 015283 274 SDLAARVK-------SQLKRLA-RPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKD-K 343 (410)
Q Consensus 274 ~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~-g 343 (410)
+++.+++. +...... ...+.+|+..+..++...|+ +. ... .++++.++.+++.+++.+.|+ ++ |
T Consensus 221 ~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~---~l--~~~GG~~~i~~~~~~l~~~l~~~L~-~~~g 294 (377)
T 3e77_A 221 DDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLE---WI--KNNGGAAAMEKLSSIKSQTIYEIID-NSQG 294 (377)
T ss_dssp TTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHH---HH--HHTTHHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred HHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHH---HH--HHccCHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 44322111 0000001 11223444433333322222 10 012 357888999999999999998 87 4
Q ss_pred CCCCccccc----CCcce---eeecCCC--H----HHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHH
Q 015283 344 SGKDWSFIL----RQIGM---FSFTGLN--K----AQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAII 403 (410)
Q Consensus 344 ~~~~~~~~~----~~~~~---~~~~~~~--~----~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~ 403 (410)
+ .... ..++. |.+.+++ . .+...+. ++||.+.+| | |+|+.. .|+++++.+++.|+
T Consensus 295 ~----~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~-~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~ 369 (377)
T 3e77_A 295 F----YVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKAL-ELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMK 369 (377)
T ss_dssp S----EECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHH-HTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred c----eecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHH-HCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 2 2111 11222 3334442 2 2344444 469999887 3 999875 48999999999999
Q ss_pred HHhhh
Q 015283 404 DSYHN 408 (410)
Q Consensus 404 ~~l~~ 408 (410)
+++++
T Consensus 370 ~~~~~ 374 (377)
T 3e77_A 370 KFLEM 374 (377)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 229
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.73 E-value=6e-17 Score=151.26 Aligned_cols=309 Identities=11% Similarity=0.039 Sum_probs=184.5
Q ss_pred CcccccHHHHHHHHHhhcc----CCC-c--cC-cC--CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHH
Q 015283 49 LQPYVLDVVKKAENLMLER----GEN-K--EY-LP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 118 (410)
Q Consensus 49 ~~~~~~~~v~~a~~~~~~~----~~~-~--~y-~~--~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~ 118 (410)
|+.++++.|++++.+.+.. +.. + .+ .+ ..-+.+.|+.+++++.... +++|+|+ |+|||++++++
T Consensus 12 gpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~-----~~~v~f~-t~~~T~a~n~~ 85 (361)
T 3m5u_A 12 GPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELND-----DYEVLFL-QGGASLQFAMI 85 (361)
T ss_dssp SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCT-----TEEEEEE-SSHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CceEEEE-cCcHHHHHHHH
Confidence 4455689999999887632 110 0 01 10 1235678888888875431 3355542 89999999998
Q ss_pred HHHHHHhCCCCEEEE-cCCCCc-chhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC
Q 015283 119 AALIERYFPGAKVLI-SSPTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 196 (410)
Q Consensus 119 ~~~~~~~~~gd~Vl~-~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~ 196 (410)
+.+.+ +||++.+ ....|. .+...++..|.++..++......+..+++. + +++ +++++.+++.+|.||..
T Consensus 86 --~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~---~t~lv~~~~~e~~tG~~ 156 (361)
T 3m5u_A 86 --PMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSD---NADYAYICSNNTIYGTQ 156 (361)
T ss_dssp --HHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCT---TSSEEEEESEETTTTEE
T ss_pred --HHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCC---CCCEEEEeCCCCCccee
Confidence 44445 8886632 222332 223355678999999987322212145555 3 543 56667777888888997
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchh
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL 276 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~ 276 (410)
.+. | ++ +|+++++|.+ +.++..+.+.+ ...+++.|..|.+|++|+ |++++ +++.
T Consensus 157 ~~~-----i---~~-~~~~~~vD~~-q~~g~~~id~~-----------~~d~~~~s~~K~~gp~G~--g~l~~---~~~~ 210 (361)
T 3m5u_A 157 YQN-----Y---PK-TKTPLIVDAS-SDFFSRKVDFS-----------NIALFYGGVQKNAGISGL--SCIFI---RKDM 210 (361)
T ss_dssp CSS-----C---CC-CSSCEEEECG-GGTTSSCCCCT-----------TEEEEEEETTTTSSCTTC--EEEEE---EHHH
T ss_pred CCc-----c---cc-cCCEEEEEcc-cccCCCCCCcc-----------cCCEEEEechhccCCCcc--EEEEE---cHHH
Confidence 652 3 33 4999999999 55543222221 134778899999998875 77765 6776
Q ss_pred HHHHHH----H---HHhh--ccCcccCCChhHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015283 277 AARVKS----Q---LKRL--ARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 344 (410)
Q Consensus 277 ~~~~~~----~---~~~~--~~~~~~~~~~~~~~~a---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 344 (410)
.+++.. . .... ....+.+++..+..++ ..++.+.. .++++.++.+++++++.+.|+ +++.
T Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~g-------G~~~i~~~~~~l~~~l~~~L~-~~~g 282 (361)
T 3m5u_A 211 LERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQG-------GLDKVHEKNSQKATMLYECID-LSNG 282 (361)
T ss_dssp HHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTT-------CHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred HhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHcc-------CHHHHHHHHHHHHHHHHHHHH-HCCC
Confidence 655532 0 0000 1112233444333322 22222210 146888899999999999998 8761
Q ss_pred CCCcccc-cC---Ccce--eeecC---CCHHHHHHhhhcCcEEEcCC----C--eEEecC-CCcccHHHHHHHHHHHhhh
Q 015283 345 GKDWSFI-LR---QIGM--FSFTG---LNKAQSDNMTNKWHVYMTKD----G--RISLAG-LSLAKCEYLADAIIDSYHN 408 (410)
Q Consensus 345 ~~~~~~~-~~---~~~~--~~~~~---~~~~~~~~ll~~~gi~v~~~----g--Ris~~~-~~~~~i~~~~~~l~~~l~~ 408 (410)
.+... .+ ..+. |.+.+ ++.++. ..++++||.+.+| | |+|+.. .|+++++++++.|+++.++
T Consensus 283 --~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~-~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 283 --FYKGHADKKDRSLMNVSFNIAKNKDLEPLFV-KEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp --SEEESSCGGGBCSSEEEEEESSCTTHHHHHH-HHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred --eeeccCCHHHcCCeEEEEECCCchhhhHHHH-HHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 01211 11 1122 22233 233344 4455679999887 3 999775 4899999999999999875
Q ss_pred c
Q 015283 409 V 409 (410)
Q Consensus 409 ~ 409 (410)
.
T Consensus 360 ~ 360 (361)
T 3m5u_A 360 Y 360 (361)
T ss_dssp H
T ss_pred c
Confidence 3
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.72 E-value=3e-16 Score=150.90 Aligned_cols=339 Identities=14% Similarity=0.051 Sum_probs=189.3
Q ss_pred CCeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CC-ccCcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 34 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 34 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
...||+..|.--...|+. +|.+.+++.+++... +. ..+.+.....++.+.+++...... .+.+.+ +++|
T Consensus 64 ~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~~v~f--~~sG 134 (456)
T 4atq_A 64 NSFIDLGSGIAVTSVGAS--DPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDH-----AKRTVL--FNSG 134 (456)
T ss_dssp CEEEESSHHHHTCTTCTT--CHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSS-----CEEEEE--ESSH
T ss_pred CEEEEccccHHHHhcCCC--CHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCC-----CcEEEE--eCCh
Confidence 356777766432344554 588999888876542 21 122344455577777777753321 356888 8999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhh-hhhCCC-------------Cccceeeec----CCCcccChhhHHHH
Q 015283 112 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYD----PKTVGLDFEGMIAD 173 (410)
Q Consensus 112 t~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~----~~~~~~d~~~l~~~ 173 (410)
++|++.+.++.+......+|+..+.+|.+.... +...+. .+..+|... ......+.+.+.+.
T Consensus 135 sEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 214 (456)
T 4atq_A 135 AEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRA 214 (456)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHH
Confidence 999999999888777778999998888765432 111111 122233211 01111122332222
Q ss_pred Hh---c--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcE
Q 015283 174 IK---A--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 247 (410)
Q Consensus 174 i~---~--~~~~~~~ii~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (410)
+. + .++....+++-..+...|.+. ++.-++++.++|++||+++|.||+..+|+-. ...+....+ +-.+++
T Consensus 215 ~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRt---G~~~a~e~~-gv~PDi 290 (456)
T 4atq_A 215 ITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRT---GEWFAVDHE-GVVPDI 290 (456)
T ss_dssp HHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT---SSSSGGGGT-TCCCSE
T ss_pred HHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCc---ccccccccc-CCCCch
Confidence 21 1 123566666666676677665 4556999999999999999999999987632 223333222 223454
Q ss_pred EEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHH---hCChhhHHHHHHHHHHHH
Q 015283 248 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEMMA 324 (410)
Q Consensus 248 i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~---l~~~~~~~~~~~~~~~~~ 324 (410)
+ +++|.+| .|+.+|.+.+ ++++.+.+.. ....+++. ...++..++... ++++++ .
T Consensus 291 v---t~gK~lg-gg~P~~av~~---~~~i~~~~~~---~~~~~Tf~-gnpla~aaala~L~~i~~~~l-----------~ 348 (456)
T 4atq_A 291 I---TMAKGIA-GGLPLSAITG---RADLLDAVHP---GGLGGTYG-GNPVACAAALAAIDTMEQHDL-----------N 348 (456)
T ss_dssp E---EECGGGG-TTSSCEEEEE---EHHHHTTSCT---TSSCCSSS-SCHHHHHHHHHHHHHHHHTTH-----------H
T ss_pred h---hhhhccc-CcCCceeeEe---cHHHHhcccc---cCCCCCCC-CChHHHHhhHHHHHHHhhccH-----------H
Confidence 4 6789998 7899999755 6664333321 11223333 334444444333 333222 2
Q ss_pred HHHHHHHHHHHHHhhhcc----CCC-CCcccccCCcceeeecCC--------C----HHHHHHhhhcCcEEEcCCC----
Q 015283 325 GRIKNVRQKLFDSLSAKD----KSG-KDWSFILRQIGMFSFTGL--------N----KAQSDNMTNKWHVYMTKDG---- 383 (410)
Q Consensus 325 ~~~~~~~~~l~~~l~~~~----g~~-~~~~~~~~~~~~~~~~~~--------~----~~~~~~ll~~~gi~v~~~g---- 383 (410)
++.++..+++.+.|+ ++ ... .++.-.....|.+.-+.+ + ..+..++++ +|+.+.++|
T Consensus 349 ~~~~~~g~~l~~~L~-~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~-~Gvl~~~~g~~~~ 426 (456)
T 4atq_A 349 GRARHIEELALGKLR-ELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLK-EGVIILTCGTYGN 426 (456)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECEEECTTSC
T ss_pred HHHHHHHHHHHHHHH-HHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHH-CCCEEEecCCCCC
Confidence 333333333433333 22 100 001111122233322211 1 234556665 599987654
Q ss_pred --eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 384 --RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 --Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
||..+ ..|++++++++++|.++++..
T Consensus 427 ~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 427 VIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 66644 248999999999999999764
No 231
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.71 E-value=5.2e-17 Score=163.09 Aligned_cols=172 Identities=12% Similarity=0.063 Sum_probs=115.6
Q ss_pred CcCCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCc
Q 015283 73 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW 152 (410)
Q Consensus 73 y~~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 152 (410)
+.|..-+.++++.+|+++... ..+++ ++|+++++..+ +.+.+.+||+|+++.++|.++...+...|+++
T Consensus 191 ~~~~g~i~eaE~~lA~~fGa~-------~a~~v--~nGts~An~~a--i~al~~pGD~VLv~r~~H~S~~~~l~lsGa~p 259 (715)
T 3n75_A 191 LDHSGPHKEAEQYIARVFNAD-------RSYMV--TNGTSTANKIV--GMYSAPAGSTILIDRNCHKSLTHLMMMSDVTP 259 (715)
T ss_dssp TTTBTHHHHHHHHHHHHHTCS-------EEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEESSCCHHHHHHHHHSCCEE
T ss_pred CCCcHHHHHHHHHHHHHhCCC-------CceEE--CcHHHHHHHHH--HHHhCCCCCEEEECCCccHHHHHHHHHcCCEE
Confidence 445555689999999996432 33555 66667888777 45568899999999999999999999999999
Q ss_pred cceeeecCCCccc---------ChhhHHHHHhcCCCC--cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccccc
Q 015283 153 SEYRYYDPKTVGL---------DFEGMIADIKAAPGG--SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 153 ~~v~~~~~~~~~~---------d~~~l~~~i~~~~~~--~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
+.++... +.+++ |++.+++.++++++. ++++++++| ||+|.+.+.+ +|+++|++++ +++|||
T Consensus 260 v~v~~~~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~---~I~ela~~~~--livDEA 332 (715)
T 3n75_A 260 IYFRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTD---FIKKTLDVKS--IHFDSA 332 (715)
T ss_dssp EEECCCB-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHH---HHHHHCCCSE--EEEECT
T ss_pred EEEeccc-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHH---HHHHHhCcCc--EEEccc
Confidence 8887632 33443 899999999864321 225566788 9999977655 5555677653 789999
Q ss_pred CCCCC-CCCCCCchhHhHHHhhc--CCc-EEEEecccccccccCCC-cceE
Q 015283 222 YQGFA-SGSLDNDASSVRLFATR--GME-LLVAQSYSKNLGLYAER-IGAM 267 (410)
Q Consensus 222 y~~~~-~~~~~~~~~~~~~~~~~--~~~-~i~~~S~sK~~~~~G~r-~G~l 267 (410)
|.... +++ ...+....... .+. ++++.|+||+++ |+. .|++
T Consensus 333 H~~~~~f~~---~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i 378 (715)
T 3n75_A 333 WVPYTNFSP---IYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMI 378 (715)
T ss_dssp TCTTGGGSG---GGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEE
T ss_pred cccccccCC---ccccccccccCcCCCEEEEEEeccccccc--CCCCeeEE
Confidence 87553 221 00001111110 133 366999999975 543 3565
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.69 E-value=3e-15 Score=144.54 Aligned_cols=340 Identities=13% Similarity=0.089 Sum_probs=191.5
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccC-CCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
..||+..|.--...|+. .|.+.+++.+++... +.+.+. +.....+|.+.+++..... .+.+.+ +++|
T Consensus 68 ~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~sG 137 (473)
T 4e3q_A 68 RYLDANSGLWNMVAGFD--HKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFD------SGRVFY--TNSG 137 (473)
T ss_dssp EEEETTTTTTTCTTCSC--CHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCS------SCEEEE--ESSH
T ss_pred EEEEcccCHHHhhccCC--CHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCC------ccEEEE--eCch
Confidence 45666665432234544 588889888877542 112221 1222335666666653222 468999 9999
Q ss_pred hhHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchhh-hhhhCCCC-----------ccceeeec----CCCcc-----
Q 015283 112 TGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKN-IFNDARVP-----------WSEYRYYD----PKTVG----- 164 (410)
Q Consensus 112 t~a~~~~~~~~~~~-----~~g-d~Vl~~~p~y~~~~~-~~~~~g~~-----------~~~v~~~~----~~~~~----- 164 (410)
++|++.+.++.+.+ .++ .+|+...-+|.+... .+...|.. ...++... .....
T Consensus 138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 217 (473)
T 4e3q_A 138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF 217 (473)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence 99999998887654 133 578888877765432 22222211 11111100 00000
Q ss_pred --cChhhHHHHHhcC-CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHH
Q 015283 165 --LDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 240 (410)
Q Consensus 165 --~d~~~l~~~i~~~-~~~~~~ii~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 240 (410)
...+++++.+.+. ++...++++...+.-.|.+.+ +.-+++|.++|++||+++|.||+..+|+-. ...+....+
T Consensus 218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRt---G~~fa~e~~ 294 (473)
T 4e3q_A 218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRT---GNTWGCVTY 294 (473)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTT---SSSCHHHHT
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcc---cchhHHHhc
Confidence 0123455555432 234566666666777787665 455999999999999999999999998632 233333322
Q ss_pred hhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhh----ccCcccCCChhHHHHHHHHh---CChhhH
Q 015283 241 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL----ARPMYSNPPVHGARIVANVV---GNPALF 313 (410)
Q Consensus 241 ~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~l---~~~~~~ 313 (410)
+-.++++ +++|.++-.++.+|.+.+ ++++.+.+....... ...++ +...++..++...| +++
T Consensus 295 -gv~PDi~---t~~K~l~gG~~Pl~av~~---~~~i~~~~~~~~~~~~~~~hg~T~-~Gnpla~Aaala~L~~i~~~--- 363 (473)
T 4e3q_A 295 -DFTPDAI---ISSKNLTAGFFPMGAVIL---GPELSKRLETAIEAIEEFPHGFTA-SGHPVGCAIALKAIDVVMNE--- 363 (473)
T ss_dssp -TCCCSEE---EECGGGGTTSSCCEEEEE---CHHHHHHHHHHHHHHSCCCCCCTT-TTCHHHHHHHHHHHHHHHHS---
T ss_pred -CCCCChH---HhcccccCCCCCcccccc---cHHHHHHhccccccccccccCCCC-CCCcchhhhhhhhhhhhccc---
Confidence 2334555 579999844489999765 888777765543322 12223 33344444443333 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceeeecC----------C------CHHHHHHhhhcCcE
Q 015283 314 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG----------L------NKAQSDNMTNKWHV 377 (410)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~----------~------~~~~~~~ll~~~gi 377 (410)
...++.++..++|.+.|+ ++.-...+..+ ...|.+.-+. . ...+...+++ .|+
T Consensus 364 --------~l~~~~~~~g~~l~~~L~-~l~~~~~v~~v-RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~-~Gl 432 (473)
T 4e3q_A 364 --------GLAENVRRLAPRFEERLK-HIAERPNIGEY-RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTD-LGL 432 (473)
T ss_dssp --------SHHHHHHHHHHHHHHHHH-HHTTSTTEEEE-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTE
T ss_pred --------cHHHHHHHHHHHHHHHHH-HHhcCCCeeEE-eecceEEEEEEecCccccccccccHHHHHHHHHHHHH-CCc
Confidence 333455555666666665 54311111111 2223322111 1 1234555655 699
Q ss_pred EEcCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 378 YMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 378 ~v~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
++.|.| ||+.+ .+|++++++++++|.++++++
T Consensus 433 l~~~~g~~i~l~PPL~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 433 ICRPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp ECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999877 66543 259999999999999888753
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.68 E-value=3.6e-15 Score=138.86 Aligned_cols=333 Identities=14% Similarity=0.146 Sum_probs=193.4
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhccCCCccCcC------CcccHHHHHHHHHHhcCCCCCcccCCceEEEec
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 108 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 108 (410)
.-|+|-..++ ++++.|++++-..+.+...-+|+. .+-++++.....+.....++... .++-+=++.
T Consensus 55 ~~ieLIASEN-------~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~-A~w~VNVQP 126 (490)
T 3ou5_A 55 RGLELIASEN-------FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDP-AQWGVNVQP 126 (490)
T ss_dssp HSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCT-TTEEEECCC
T ss_pred cCceEecCCC-------cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCc-cccCCCCCc
Confidence 3467775553 247999999877664443344432 22223333333323233333322 232223456
Q ss_pred CChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhh--------hhCCC--CccceeeecCCCcccChhhHHHHHhcCC
Q 015283 109 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--------NDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAP 178 (410)
Q Consensus 109 ~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~--------~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 178 (410)
.+|+.|+..+ +++.+.|||+|+..+...+++...- ...|. +...+++ +.+++.+|.+++++...++
T Consensus 127 ~SGs~AN~av--y~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~v-d~~t~~IDyd~~~~~A~~~- 202 (490)
T 3ou5_A 127 YSGSPANLAV--YTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALTARLF- 202 (490)
T ss_dssp SSHHHHHHHH--HHHHCC-CCCEECBC----------------------------CBCE-ETTTTEECHHHHHHHHHHH-
T ss_pred CCHHHHHHHH--HHHHcCCCCEEEecccCCCCcccccccCCCccccccccccccccccc-CCCCCcccHHHHHHHHhhc-
Confidence 8899999888 5667899999999998877764322 12222 4455555 3566789999999988774
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCC-CCCCCCCCCchhHhHHHhhcCCcEEEEecccccc
Q 015283 179 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 257 (410)
Q Consensus 179 ~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 257 (410)
++++|+...-.+|- .-+++++.++|++.|.+++.|.+|. ++..++..+.+ + + ...++..|.+|++
T Consensus 203 -kPklIi~G~SaY~r-----~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP--~----~--~ADvVTtTTHKTL 268 (490)
T 3ou5_A 203 -RPRLIIAGTSAYAR-----LIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSP--F----K--HADIVTTTTHKTL 268 (490)
T ss_dssp -CCSEEEECCSSCCS-----CCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG--G----G--TCSEEEEESSSTT
T ss_pred -CCCeEEECCccCcc-----ccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCc--c----c--cceEEeccccccc
Confidence 55666755444444 2357777777999999999999973 33333222222 1 1 2467889999997
Q ss_pred cccCCCcceEEEEeCCc----------hhHHHHHHHHHhhccCccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 015283 258 GLYAERIGAMNVVCSSS----------DLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 326 (410)
Q Consensus 258 ~~~G~r~G~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 326 (410)
.|-|-|.+. +++. +....+.+.+....++... +|..+. .++... .+.+.+..+++.+.++
T Consensus 269 --rGPrGG~Il--~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~-IAAkAV----af~Ea~~p~fk~Ya~q 339 (490)
T 3ou5_A 269 --RGARSGLIF--YRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHA-IAAVAV----ALKQACTPMFREYSLQ 339 (490)
T ss_dssp --CSCSCEEEE--EECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHH-HHHHHH----HHHHHHSHHHHHHHHH
T ss_pred --cCCCceEEE--eccccccccccccchhHHHHHHHHHhhcCccccccchHHH-HHHHHH----HHHHHHhHhHHHHHHH
Confidence 588878763 3331 0000133445555555333 444433 333222 2222234456788899
Q ss_pred HHHHHHHHHHHhhhccCCCCCcccccCCccee-eec-----CCCHHHHHHhhhcCcEEEc----CC--------C-eEEe
Q 015283 327 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFT-----GLNKAQSDNMTNKWHVYMT----KD--------G-RISL 387 (410)
Q Consensus 327 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~ll~~~gi~v~----~~--------g-Ris~ 387 (410)
..++.+.|.+.|. +.|+ .+....+-.+ +++ +++...++++|++.||.+. |+ | ||..
T Consensus 340 Vv~NAkaLA~~L~-~~G~----~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGT 414 (490)
T 3ou5_A 340 VLKNARAMADALL-ERGY----SLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGA 414 (490)
T ss_dssp HHHHHHHHHHHHH-HTTC----EEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEES
T ss_pred HHHHHHHHHHHHH-hCCC----eeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECC
Confidence 9999999999999 8884 5444333333 444 3477889999999999874 32 4 8863
Q ss_pred c-----CCCcccHHHHHHHHHHHhh
Q 015283 388 A-----GLSLAKCEYLADAIIDSYH 407 (410)
Q Consensus 388 ~-----~~~~~~i~~~~~~l~~~l~ 407 (410)
+ ++.+++++++.+.|.+++.
T Consensus 415 pa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 415 PALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 3 4688999999999988764
No 234
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.60 E-value=9.6e-14 Score=129.94 Aligned_cols=234 Identities=11% Similarity=0.000 Sum_probs=141.0
Q ss_pred HHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHhCC----CCEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283 81 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP----GAKVLISSPTWGNHKNIFNDARVPWSEYR 156 (410)
Q Consensus 81 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 156 (410)
+|-+.++.-+.+..|.+.... .++ ++|+|+++..+ ++..+.+ ||.|+++.-++.+....+...|++++.++
T Consensus 116 ~ltn~l~ld~L~~~G~~~~~~-~fl--VnGsTgg~lam--ilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~ 190 (501)
T 3hl2_A 116 KITNSLVLDIIKLAGVHTVAN-CFV--VPMATGMSLTL--CFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIE 190 (501)
T ss_dssp HHHHHHHHHHHHHTTCTTCCE-EEE--ESSCHHHHHHH--HHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCCCc-EEE--ECcHHHHHHHH--HHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEe
Confidence 555555544445556653333 444 69999777776 4444553 49999999999999999999999999885
Q ss_pred e-ecCCCcccChhhHHHHHhcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283 157 Y-YDPKTVGLDFEGMIADIKAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 234 (410)
Q Consensus 157 ~-~~~~~~~~d~~~l~~~i~~~~~~~~~ii-~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 234 (410)
. .+++..++|++.+++.+++++...++++ .++++|..|. ..++++|+++|++||+++++|+||...... ...
T Consensus 191 p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~---~ddI~eIaeIch~~gIpllVDeAhGah~~~---~~~ 264 (501)
T 3hl2_A 191 NVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRV---PDRLEELAVICANYDIPHIVNNAYGVQSSK---CMH 264 (501)
T ss_dssp EEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBC---CCCHHHHHHHHHHHTCCEEEECTTCTTCHH---HHH
T ss_pred eeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcc---cccHHHHHHHHHHcCCeEEEeCcchhhhhh---hhh
Confidence 4 3344678999999999987543344444 4334443333 457889999999999999999998765411 011
Q ss_pred hHhHHHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHHHHHHHhhccCcccCCChhHHHHHHHHhCChhhHH
Q 015283 235 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD 314 (410)
Q Consensus 235 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 314 (410)
.. ......+.-++++.|..|.+-.+ +. |++ +...+++.++++... + -...+..++....++ .+.-
T Consensus 265 lp-~sA~~~GrAD~vVqS~HK~llvp-IG-G~i-i~~~d~e~l~~~~~~---y-PGr~S~Spsldl~~t--LL~l----- 329 (501)
T 3hl2_A 265 LI-QQGARVGRIDAFVQSLDKNFMVP-VG-GAI-IAGFNDSFIQEISKM---Y-PGRASASPSLDVLIT--LLSL----- 329 (501)
T ss_dssp HH-HHHHHHSCCCEEEEEHHHHHCCC-SS-CEE-EEESCHHHHHHHHHT---S-CSCBCSHHHHHHHHH--HHHH-----
T ss_pred hH-HHHHhcCCCcEEEecccccceee-cC-ceE-EEeCCHHHHHHHHHh---C-CCCCCCcHHHHHHHH--HHHH-----
Confidence 11 12222333677889999997544 22 333 235666655543221 1 011122222222222 2111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015283 315 EWKAEMEMMAGRIKNVRQKLFDSLSAKD 342 (410)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 342 (410)
..+.+++..++..++..++.+.|+ ++
T Consensus 330 -Gr~Gy~~ll~e~~ela~~L~~~L~-~l 355 (501)
T 3hl2_A 330 -GSNGYKKLLKERKEMFSYLSNQIK-KL 355 (501)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 133445666666666666666666 54
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.58 E-value=4.4e-15 Score=152.71 Aligned_cols=345 Identities=10% Similarity=0.089 Sum_probs=184.9
Q ss_pred CeeeeeeeeeecCCCcccccHHHHHHHHHhhcc-CCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCCh
Q 015283 35 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 111 (410)
Q Consensus 35 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~gg 111 (410)
..+|+..|.--...|+.. .|++.+|+.+++.. .+ ..+. ......+|.+.+++...... .+.+.| +++|
T Consensus 381 ~ylD~~sg~~~~~lGh~~-~p~i~~Ai~~Q~~~l~h-~~~~~~~~~~~~~Lae~L~~~~p~~~-----l~~vff--~~SG 451 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTF-QAELAREMGYTAARFGH-VMFPENVYEPALKCAELLLDGVGKGW-----ASRVYF--SDNG 451 (831)
T ss_dssp EEEETTHHHHTCCCCHHH-HHHHHHHHHHHHHHHSS-CCCTTEECHHHHHHHHHHHHTTTTTT-----CCEEEE--ESSH
T ss_pred heeeecccHhhcCCCCCC-CHHHHHHHHHHHhhccc-ccccccCCHHHHHHHHHHHHhCCCCC-----CCEEEE--CCCh
Confidence 467777764323445431 58888888877644 22 1111 12223356666666532110 367999 9999
Q ss_pred hhHHHHHHHHH-HHh--CCC------------CEEEEcCCCCcch-hhhhhhCCCCcc----------------------
Q 015283 112 TGSLRLAAALI-ERY--FPG------------AKVLISSPTWGNH-KNIFNDARVPWS---------------------- 153 (410)
Q Consensus 112 t~a~~~~~~~~-~~~--~~g------------d~Vl~~~p~y~~~-~~~~~~~g~~~~---------------------- 153 (410)
++|++.+.++. +.+ ..| .+|+...-+|.+- ...+...|....
T Consensus 452 SeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~ 531 (831)
T 4a0g_A 452 STAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVF 531 (831)
T ss_dssp HHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEE
T ss_pred hHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCcccc
Confidence 99999998877 323 122 3688878777543 333333332110
Q ss_pred ------ceeeecC------CCccc-C------------------hhhHHHHHhc-----CCCCcEEEEeCCC-CCCCCCC
Q 015283 154 ------EYRYYDP------KTVGL-D------------------FEGMIADIKA-----APGGSFILLHGCA-HNPTGID 196 (410)
Q Consensus 154 ------~v~~~~~------~~~~~-d------------------~~~l~~~i~~-----~~~~~~~ii~~~p-~NPtG~~ 196 (410)
.++.... +.... + .+.+++.+.+ .+.+..+|++-+. ++..|..
T Consensus 532 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~ 611 (831)
T 4a0g_A 532 LSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMH 611 (831)
T ss_dssp EETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSE
T ss_pred ccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCc
Confidence 0111000 00000 1 2456666652 2345666666654 7888876
Q ss_pred C-CHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhhcCCcEEEEecccccccccC-CCcceEEEEeCCc
Q 015283 197 P-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSS 274 (410)
Q Consensus 197 ~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~l~~~~~~~ 274 (410)
. +++.+++|.++|++||+++|+||++.+|+..+ ..+....+ +..++++ +++|.++ .| +++|++++ ++
T Consensus 612 ~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG---~~fa~e~~-gv~PDii---tlsK~L~-gG~~Plgav~~---~~ 680 (831)
T 4a0g_A 612 MVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLG---VETTTELL-GCKPDIA---CFAKLLT-GGMVPLAVTLA---TD 680 (831)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTS---BSSTHHHH-SSCCSEE---EECGGGG-TTSSCCEEEEE---CH
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEcCccccccCC---CchhhHhc-CCCCcEE---EEecccc-cCccCcEEEEE---CH
Confidence 5 66779999999999999999999999987432 22232222 2233444 7999998 47 89999755 77
Q ss_pred hhHHHHHHHHHh--hccCcccCCChhHHHHHHH---HhCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhhhccCCCCCc
Q 015283 275 DLAARVKSQLKR--LARPMYSNPPVHGARIVAN---VVGNPALFDEWKAEMEMMAGRIKN-VRQKLFDSLSAKDKSGKDW 348 (410)
Q Consensus 275 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~---~l~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~g~~~~~ 348 (410)
++++.+....+. .....+.+.+.+++.++.. .++++++. +.+.+..+++++ .++.+.+.+. +.+. +
T Consensus 681 ~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~----~~~~~~~~~l~~~l~~~l~~~l~-~~~~---v 752 (831)
T 4a0g_A 681 AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETN----HNITSQGKTLRELWDEELVQQIS-SHSA---V 752 (831)
T ss_dssp HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTC----TTBCTTSSBBCCCSCHHHHHHHH-HSTT---E
T ss_pred HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHH----HHHHHHHHHHHHHHHHHHHHHHh-hCCC---c
Confidence 755544321000 1111222334444444433 33333221 111111111111 0112333444 4331 2
Q ss_pred ccccCCcceeeecCCC-------------HHHHHHhhhcCcEEEcCCC---eEEec-CCCcccHHHHHHHHHHHhhhc
Q 015283 349 SFILRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 349 ~~~~~~~~~~~~~~~~-------------~~~~~~ll~~~gi~v~~~g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 409 (410)
..+.. .|.+..+.+. ..+...+++ +||++.|.| ||+.+ ..+++++++++++|.++++++
T Consensus 753 ~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e-~Gv~v~p~g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 753 QRVVV-IGTLFALELKADASNSGYASLYAKSLLIMLRE-DGIFTRPLGNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp EEEEE-ETTEEEEEEC---------CHHHHHHHHHHHH-TTEECCCBTTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred eeEee-cccEEEEEEecCccccccchHHHHHHHHHHHH-CCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 22222 3333333221 123455555 699999987 77633 349999999999999998765
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.48 E-value=1.7e-13 Score=129.85 Aligned_cols=188 Identities=11% Similarity=-0.026 Sum_probs=118.6
Q ss_pred cHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHH-HHHHHhC-CCCEEEEcCCCCcchhhhhhhCCCCcccee
Q 015283 79 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAA-ALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYR 156 (410)
Q Consensus 79 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~-~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 156 (410)
...+.+.+..++....|.+-. .-..+ ++|+|++...++ ...+... +|+.|+++.-+|.+....+...|+.++.++
T Consensus 96 ~~~~e~~~~~~~~~~lGlp~~-~~~~l--V~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~ 172 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVHSV-ASCFV--VPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIE 172 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCTTC-CEEEE--ESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCC-ceEEE--ECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEE
Confidence 345555666665554454321 22344 688885555542 2222222 389999999999999999999999888775
Q ss_pred ee-cCCCcccChhhHHHHHhcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCch
Q 015283 157 YY-DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 234 (410)
Q Consensus 157 ~~-~~~~~~~d~~~l~~~i~~~~-~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 234 (410)
.. +++.+.+|++.+++.+++.+ +.+.+++.+..++.+|. .+++++|+++|++||+++++|+||...... .
T Consensus 173 ~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~---~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~-----~ 244 (450)
T 3bc8_A 173 NVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRV---PDRLEELAVICANYDIPHVVNNAYGLQSSK-----C 244 (450)
T ss_dssp CEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBC---CCCHHHHHHHHHHHTCCEEEECTTTTTCHH-----H
T ss_pred eeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCce---ecCHHHHHHHHHHCCCeEEEECCCchhhhh-----h
Confidence 42 24567899999999997744 23444444333444555 567889999999999999999998765421 1
Q ss_pred hHhH-HHhhcCCcEEEEecccccccccCCCcceEEEEeCCchhHHHH
Q 015283 235 SSVR-LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 280 (410)
Q Consensus 235 ~~~~-~~~~~~~~~i~~~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 280 (410)
..+. .......-+.++.|.+|.+..+ ...+++ ..++++..+++
T Consensus 245 ~~l~~~a~~~~~AD~~v~S~HK~l~a~-~~~~~l--~~rd~~~~~~~ 288 (450)
T 3bc8_A 245 MHLIQQGARVGRIDAFVQSLDKNFMVP-VGGAII--AGFNEPFIQDI 288 (450)
T ss_dssp HHHHHHHHHHSCCCEEEEEHHHHHSCC-SSCEEE--EESCHHHHHHH
T ss_pred HhHHHHHhcccCCCEEEECCccCCCch-hccEEE--EecCHHHHHHH
Confidence 1111 1121123466788999998543 223443 34566655444
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=71.69 E-value=17 Score=35.03 Aligned_cols=68 Identities=13% Similarity=0.054 Sum_probs=41.8
Q ss_pred hhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 144 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 144 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
.+..++.++....+.|..+|.+..+..-++-.. +.. .....+.|..++++|+++|++.|+++|+-||-
T Consensus 207 ~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~-Ga~------~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 207 LASQYKINKFHMHLSDDQGWRIEIKSWPDLIEI-GSK------GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHT-TTS------CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHcCCcEEEEEeccCCccccccccchhhhhc-cCc------cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 334556666666665555566655554433221 001 01122346779999999999999999987663
No 238
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=67.71 E-value=17 Score=34.83 Aligned_cols=65 Identities=8% Similarity=-0.054 Sum_probs=38.9
Q ss_pred hCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 147 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
.+++++....+.+..+|.+.++..-++-.. +.. .......|..++.+|+++|++.|+++|+-||-
T Consensus 185 ~~KlN~lh~HltDdq~wriei~~~P~Lt~~-ga~------~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 185 RYKYNKLHLHLSDDQGWRIAIDSWPRLATY-GGS------TEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp TTTCCEEEEECBCSSCBCBCCTTSTHHHHT-TTS------CCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HcCCcEEEEEeccCCCceehhhhhHHHHhh-cCc------cccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 455566555554444555554444332221 000 01112336789999999999999999998773
No 239
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=59.03 E-value=16 Score=34.99 Aligned_cols=25 Identities=8% Similarity=-0.035 Sum_probs=22.4
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
|..++.+|+++|++.|+++|+-||-
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6679999999999999999998773
No 240
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=52.72 E-value=42 Score=29.08 Aligned_cols=101 Identities=15% Similarity=0.075 Sum_probs=55.4
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc---
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA--- 176 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~--- 176 (410)
...+++ +.||+.++-.+. .......|-.|++.+-.-.......+..|.+...+..+ - -|.+++++.+++
T Consensus 28 ~gKval--VTGas~GIG~ai-A~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~D-v----~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 28 NAKIAV--ITGATSGIGLAA-AKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQAD-S----ANLAELDRLYEKVKA 99 (273)
T ss_dssp TTCEEE--EESCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECC-T----TCHHHHHHHHHHHHH
T ss_pred CCCEEE--EeCcCCHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEec-C----CCHHHHHHHHHHHHH
Confidence 345666 677777787662 22234589899887654444455556667777766652 1 144444444332
Q ss_pred CCCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q 015283 177 APGGSFILLHGCAHNPTGI--DPTPEQWEKIADV 208 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~--~~~~~~l~~i~~~ 208 (410)
.-.+.-+++.+.-.++.+- -++.++|+++.++
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 1123344453333333332 2567888888765
No 241
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=47.03 E-value=9.2 Score=38.55 Aligned_cols=28 Identities=18% Similarity=0.352 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||.|-||.+.+
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 7999999999999999999999987665
No 242
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=46.56 E-value=16 Score=35.06 Aligned_cols=27 Identities=7% Similarity=0.012 Sum_probs=23.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 192 PTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 192 PtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
|.|..++++|+++|++.|+++|+-||-
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 446779999999999999999998773
No 243
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=46.29 E-value=87 Score=23.16 Aligned_cols=100 Identities=9% Similarity=0.034 Sum_probs=60.1
Q ss_pred cCChhhHHHHHHHHHHHhC---CCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEE
Q 015283 108 GLSGTGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL 184 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~i 184 (410)
...|.+....+.-+++.+. .+..|+...|.+..+...+...|.....+-.....+..-.+..+|+.++. ....++
T Consensus 10 ~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrs--g~~~aV 87 (119)
T 1ofu_X 10 SGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRL--GRSHTV 87 (119)
T ss_dssp ESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHH--TCEEEE
T ss_pred cCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhc--CCccEE
Confidence 3445555555544555554 56788888988889999999999866555443222111224556777776 233333
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 015283 185 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHI 215 (410)
Q Consensus 185 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 215 (410)
+. -+. -++..+.+.+--.|++-+.+
T Consensus 88 l~-wl~-----~l~~~~~RRLqlAA~~g~~~ 112 (119)
T 1ofu_X 88 VS-WLE-----PLSRAARKQLSRAAQLGQAQ 112 (119)
T ss_dssp EE-CCS-----SCCHHHHHHHHHHHHHHTCE
T ss_pred EE-CCC-----cCChHHHHHHHHHHHhCCCe
Confidence 32 211 25677888887777765544
No 244
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=45.11 E-value=7 Score=39.44 Aligned_cols=29 Identities=7% Similarity=0.244 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||.|-||.+.+.
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt~~ 343 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHVYK 343 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 68999999999999999999999988774
No 245
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=44.88 E-value=94 Score=25.54 Aligned_cols=93 Identities=11% Similarity=0.065 Sum_probs=48.2
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEe
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 186 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~ 186 (410)
+.||++++-.. +.. ....|..|++..-.-..........+.++..+.. |- -|.+.+++.+.+.....-++++
T Consensus 6 VTGas~gIG~~--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 6 ITGASSGLGAE--LAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRAR-DL----ASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp EESTTSHHHHH--HHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEEC-CT----TCHHHHHHHHHSCSSCCSEEEE
T ss_pred EecCCchHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEee-cC----CCHHHHHHHHHHHhhcCCEEEE
Confidence 36777777665 232 3447888888765444444444455555555544 11 2567777777664222234443
Q ss_pred CCCCCCCCC--CCCHHHHHHHHH
Q 015283 187 GCAHNPTGI--DPTPEQWEKIAD 207 (410)
Q Consensus 187 ~~p~NPtG~--~~~~~~l~~i~~ 207 (410)
+....+.+. ..+.+++++..+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHH
Confidence 333222222 235566666543
No 246
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=42.51 E-value=37 Score=34.79 Aligned_cols=74 Identities=9% Similarity=0.024 Sum_probs=43.2
Q ss_pred hhhhCCCCccceeeecCCCcccChhhHHHHHhcCC------CCcEEEEeCC-CCC--CCCCCCCHHHHHHHHHHHHHcCC
Q 015283 144 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP------GGSFILLHGC-AHN--PTGIDPTPEQWEKIADVIQEKNH 214 (410)
Q Consensus 144 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~~~~ii~~~-p~N--PtG~~~~~~~l~~i~~~~~~~~~ 214 (410)
.+..+++++....+.+..+|.+.++.+-++-.... .....+. +. .++ +.|..++.+|+++|++.|+++|+
T Consensus 336 ~mA~~KlN~lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~-p~~g~~~~~~~g~YT~~direIv~YA~~rgI 414 (858)
T 1c7s_A 336 QMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLL-PQYGQGPDVYGGFFSRQDYIDIIKYAQARQI 414 (858)
T ss_dssp HHHHTTCCEEEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBC-CCTTCCSSCEECCBCHHHHHHHHHHHHTTTC
T ss_pred HHHHhCCcEEEEEeccCccccccccCCchhhhcccccccccccccccc-ccccCCCCccCCCCCHHHHHHHHHHHHHcCC
Confidence 34456777777777666667666555543321100 0000000 00 011 34678999999999999999999
Q ss_pred cccc
Q 015283 215 IPFF 218 (410)
Q Consensus 215 ~li~ 218 (410)
-||-
T Consensus 415 ~VIP 418 (858)
T 1c7s_A 415 EVIP 418 (858)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8763
No 247
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=41.76 E-value=72 Score=30.86 Aligned_cols=75 Identities=13% Similarity=0.007 Sum_probs=45.0
Q ss_pred CCCCEEEEcCCCCcchhh-------hhhhCCCCccc-----eeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCC
Q 015283 126 FPGAKVLISSPTWGNHKN-------IFNDARVPWSE-----YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 193 (410)
Q Consensus 126 ~~gd~Vl~~~p~y~~~~~-------~~~~~g~~~~~-----v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPt 193 (410)
.+||+|+++....++... .+...|++++. +.+. .=-+.++|...++..+++..+.++
T Consensus 322 ~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~S----gHa~~~eL~~~~~~~~Pk~~ipvH------- 390 (555)
T 3zq4_A 322 NPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTS----GHGGQEEQKLMLRLIKPKFFMPIH------- 390 (555)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCC----SSCCHHHHHHHHHHSCEEEEEEES-------
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEe----CCCCHHHHHHHHHHhCCCEEEEcC-------
Confidence 378999998876666542 23456777654 2221 123677887777664333333332
Q ss_pred CCCCCHHHHHHHHHHHHHcCC
Q 015283 194 GIDPTPEQWEKIADVIQEKNH 214 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~ 214 (410)
|- ...+.+.++++++.|+
T Consensus 391 Ge---~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 391 GE---YRMQKMHVKLATDCGI 408 (555)
T ss_dssp BC---HHHHHHHHHHHHHTTC
T ss_pred CC---HHHHHHHHHHHHHcCC
Confidence 22 5567888888888765
No 248
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=40.95 E-value=13 Score=39.07 Aligned_cols=28 Identities=18% Similarity=0.352 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||.|-||.+++
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 6899999999999999999999987766
No 249
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=40.03 E-value=17 Score=34.10 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=24.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
+|.|..++++|+++|++.|+++|+-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 5678899999999999999999998773
No 250
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=39.76 E-value=17 Score=34.36 Aligned_cols=29 Identities=3% Similarity=0.149 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
+.++++++++-|+++|+-||+|-|+-+.+
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 39999999999999999999999986543
No 251
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=39.05 E-value=39 Score=29.54 Aligned_cols=22 Identities=14% Similarity=0.356 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHcCCcccccc
Q 015283 199 PEQWEKIADVIQEKNHIPFFDV 220 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De 220 (410)
.+.++++++.|.++|+++|+|-
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 4556666666666666666663
No 252
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=37.07 E-value=27 Score=34.15 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=28.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
...+.++++++++-|+++|+-||.|-|+.+++.
T Consensus 214 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 246 (583)
T 1ea9_C 214 QFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGR 246 (583)
T ss_dssp TTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEccccCCC
Confidence 445689999999999999999999999887764
No 253
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=36.58 E-value=18 Score=33.96 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=24.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
+|.|..++++|+++|++.|+++|+-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4567889999999999999999998773
No 254
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=36.17 E-value=20 Score=35.00 Aligned_cols=33 Identities=6% Similarity=0.099 Sum_probs=28.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 195 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
...+.++++++++-|+++|+-||.|-|+.+++.
T Consensus 215 ~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~ 247 (585)
T 1wzl_A 215 QFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGD 247 (585)
T ss_dssp TTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCC
Confidence 344589999999999999999999999887774
No 255
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=35.60 E-value=34 Score=33.21 Aligned_cols=24 Identities=8% Similarity=-0.111 Sum_probs=21.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCccc
Q 015283 194 GIDPTPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li 217 (410)
|..++++|+++|++.|+++|+-||
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCcee
Confidence 567999999999999999998776
No 256
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=34.80 E-value=24 Score=34.55 Aligned_cols=31 Identities=16% Similarity=0.199 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.+.++++++++-|+++|+-||.|-|+.+++.
T Consensus 220 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 250 (588)
T 1j0h_A 220 GDKETLKTLIDRCHEKGIRVMLDAVFNHCGY 250 (588)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcCcCcc
Confidence 4589999999999999999999999887764
No 257
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=34.78 E-value=20 Score=36.94 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||.|-||.+.+
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~a 396 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHTA 396 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeecccc
Confidence 7999999999999999999999987665
No 258
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=34.46 E-value=89 Score=26.17 Aligned_cols=93 Identities=19% Similarity=0.110 Sum_probs=45.8
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc----CCCCcE
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA----APGGSF 182 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~~~~~ 182 (410)
+.||++++-.. +.. ....|-+|++.+-.-..........+.++..+..+ - -|.+.+++.+.+ .+ +.-
T Consensus 11 VTGas~gIG~a--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-v----~~~~~v~~~~~~~~~~~g-~id 82 (247)
T 3rwb_A 11 VTGAAQGIGKA--IAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD-I----SDPGSVKALFAEIQALTG-GID 82 (247)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCC-T----TCHHHHHHHHHHHHHHHS-CCS
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcC-C----CCHHHHHHHHHHHHHHCC-CCC
Confidence 46777777665 233 34478888887655444444444445555555441 1 244444444432 12 233
Q ss_pred EEEeCCCCCCCCC--CCCHHHHHHHHHH
Q 015283 183 ILLHGCAHNPTGI--DPTPEQWEKIADV 208 (410)
Q Consensus 183 ~ii~~~p~NPtG~--~~~~~~l~~i~~~ 208 (410)
+++++.-..+.+. ..+.+++++..+.
T Consensus 83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 83 ILVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4443333233322 2356666666543
No 259
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=34.09 E-value=32 Score=31.73 Aligned_cols=30 Identities=7% Similarity=0.137 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
+.++++++++-|+++|+-||.|-|+.+.+.
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 96 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRCA 96 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcccC
Confidence 389999999999999999999999877664
No 260
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=33.93 E-value=2.2e+02 Score=24.16 Aligned_cols=100 Identities=15% Similarity=0.066 Sum_probs=50.7
Q ss_pred CceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhh---hhhhCCCCccceeeecCCCcccChhhHHHHH---
Q 015283 101 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADI--- 174 (410)
Q Consensus 101 ~~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i--- 174 (410)
..+++ +.||+.++-.+. .......|-+|++.+-.-....+ .++..|.++..+..+ - -|.+++++.+
T Consensus 9 gKval--VTGas~GIG~ai-a~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~D-v----~~~~~v~~~~~~~ 80 (255)
T 4g81_D 9 GKTAL--VTGSARGLGFAY-AEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD-V----TDELAIEAAFSKL 80 (255)
T ss_dssp TCEEE--ETTCSSHHHHHH-HHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCC-T----TCHHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEee-C----CCHHHHHHHHHHH
Confidence 45666 577877787662 22234589999986643322222 333456666666541 1 1334444333
Q ss_pred hcCCCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q 015283 175 KAAPGGSFILLHGCAHNPTGI--DPTPEQWEKIADV 208 (410)
Q Consensus 175 ~~~~~~~~~ii~~~p~NPtG~--~~~~~~l~~i~~~ 208 (410)
.+.-.+.-+++.+.-.++.+. -++.++|+++.++
T Consensus 81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 222223344453333333332 2467777777554
No 261
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=33.47 E-value=91 Score=24.13 Aligned_cols=59 Identities=14% Similarity=0.039 Sum_probs=35.5
Q ss_pred ccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHH-HHHHHcCCc-ccccccCCC
Q 015283 164 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIA-DVIQEKNHI-PFFDVAYQG 224 (410)
Q Consensus 164 ~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~-l~~i~-~~~~~~~~~-li~Deay~~ 224 (410)
..+.+.+.+.+++. ....+++.-|-|..|..-.... .+.++ .++.+.++. .++||.|+.
T Consensus 41 ~~~~~~l~~li~~~--~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 41 DYGLSRLSELIKDY--TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp BCCHHHHHHHHTTS--EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHHHHc--CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 45788899988873 4555666777666665432222 35555 334445655 456888653
No 262
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=33.18 E-value=25 Score=32.82 Aligned_cols=29 Identities=3% Similarity=0.173 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+-+.+.
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 97 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTGF 97 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcccC
Confidence 89999999999999999999999877764
No 263
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=32.54 E-value=21 Score=33.51 Aligned_cols=29 Identities=10% Similarity=0.107 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+-+.+.
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 99999999999999999999999876654
No 264
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=32.51 E-value=2.6e+02 Score=25.22 Aligned_cols=132 Identities=12% Similarity=0.146 Sum_probs=60.0
Q ss_pred CcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccc
Q 015283 76 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSE 154 (410)
Q Consensus 76 ~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 154 (410)
+.|.+.|-+.+. ..|+ .+..+..+.-..|+|=-.++..+.... ..|..|+..+.........++..|.....
T Consensus 56 ~TG~~~LD~~Lg-----~GGl--~~G~li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~~~~a~~~g~d~~~ 128 (366)
T 1xp8_A 56 STGSLSLDLALG-----VGGI--PRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDE 128 (366)
T ss_dssp CCSCHHHHHHTS-----SSSE--ETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGG
T ss_pred cCCCHHHHHHhC-----CCCc--cCCcEEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChhHHHHHHcCCCHHH
Confidence 347776655542 0122 234454433444444444443344333 35666766655443333345566766554
Q ss_pred eeeecCCCcccChhhHHHHHhcC--CCCcEEEEeCCCCCCCC-CCC-----C----------HHHHHHHHHHHHHcCCcc
Q 015283 155 YRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTG-IDP-----T----------PEQWEKIADVIQEKNHIP 216 (410)
Q Consensus 155 v~~~~~~~~~~d~~~l~~~i~~~--~~~~~~ii~~~p~NPtG-~~~-----~----------~~~l~~i~~~~~~~~~~l 216 (410)
+.+.... +.+++.+.+... .....++++.+...-.. ..+ + ...+.+|..+++++++.+
T Consensus 129 l~i~~~~----~~e~~l~~l~~l~~~~~~~lVVIDsl~~l~~~~e~~g~~gd~~~~~~~r~~~~~lr~L~~~a~~~~~~V 204 (366)
T 1xp8_A 129 LLVSQPD----NGEQALEIMELLVRSGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAA 204 (366)
T ss_dssp CEEECCS----SHHHHHHHHHHHHTTTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEE
T ss_pred ceeecCC----cHHHHHHHHHHHHhcCCCCEEEEeChHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 4443222 344443333210 12333444455544332 111 0 123555666678888766
Q ss_pred cc
Q 015283 217 FF 218 (410)
Q Consensus 217 i~ 218 (410)
|+
T Consensus 205 I~ 206 (366)
T 1xp8_A 205 IF 206 (366)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 265
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=31.84 E-value=1e+02 Score=26.47 Aligned_cols=70 Identities=11% Similarity=0.020 Sum_probs=38.8
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 185 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii 185 (410)
+.||++++-.. +.. ....|-+|++..-.-.......+..+.++..+.. |- -|.+.+.+.+.+.+ +.-+++
T Consensus 21 VTGas~gIG~~--~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dl----~d~~~v~~~~~~~~-~iD~lv 91 (291)
T 3rd5_A 21 ITGANSGLGAV--TARELARRGATVIMAVRDTRKGEAAARTMAGQVEVREL-DL----QDLSSVRRFADGVS-GADVLI 91 (291)
T ss_dssp EECCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEEC-CT----TCHHHHHHHHHTCC-CEEEEE
T ss_pred EeCCCChHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEc-CC----CCHHHHHHHHHhcC-CCCEEE
Confidence 46777777665 233 3447888888654433344444444555555544 11 26677777777542 334444
No 266
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=31.81 E-value=27 Score=33.57 Aligned_cols=29 Identities=10% Similarity=0.109 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
+.++++++++-|+++|+-||.|-|+-+.+
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHts 106 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHTS 106 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCCc
Confidence 38999999999999999999999987765
No 267
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=31.68 E-value=2.6e+02 Score=24.65 Aligned_cols=103 Identities=10% Similarity=0.014 Sum_probs=56.0
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHhCCC--CEEEEcC--CCCcchhh--hhhhCCCCccceeeecCCCcccChhhHHHH
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIAD 173 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~~~g--d~Vl~~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 173 (410)
....++ |.+.++..... +......| -+|++.+ |.+.+..- -+...|..+..++ | ..+-..
T Consensus 121 ~g~~IL--Th~~S~tv~~~--l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~---------D-sa~~~~ 186 (315)
T 3ecs_A 121 DGATIL--THAYSRVVLRV--LEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVL---------D-AAVGYI 186 (315)
T ss_dssp TTEEEE--ECSCCHHHHHH--HHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEEC---------G-GGHHHH
T ss_pred CCCEEE--EcCCcHHHHHH--HHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEe---------h-hHHHHH
Confidence 344555 77777766655 33334444 3677655 66655433 2234454443332 2 334444
Q ss_pred HhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCccccc
Q 015283 174 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 219 (410)
Q Consensus 174 i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 219 (410)
+++ -.++++-..---..|.+.++----.++-.|+.+|+.+++=
T Consensus 187 m~~---vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 187 MEK---ADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp GGG---CSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred HHh---CCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 443 5566664333344555555555466777899999888763
No 268
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=31.61 E-value=1.8e+02 Score=28.12 Aligned_cols=79 Identities=14% Similarity=0.064 Sum_probs=46.3
Q ss_pred CCCCEEEEcCCCCcchh-------hhhhhCCCCccceeeec-CCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCC
Q 015283 126 FPGAKVLISSPTWGNHK-------NIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP 197 (410)
Q Consensus 126 ~~gd~Vl~~~p~y~~~~-------~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~ 197 (410)
.++|.|++.....++.. ..+...|++++...... .-..=-|.+++...++..+++.++.++ |-
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvH-------Ge-- 407 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWH-------GE-- 407 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEES-------BC--
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEc-------CC--
Confidence 58899999887776652 23345677765332000 001113677777776654455555553 22
Q ss_pred CHHHHHHHHHHHHHcCC
Q 015283 198 TPEQWEKIADVIQEKNH 214 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~ 214 (410)
...+.++++++++.|+
T Consensus 408 -~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 408 -VRHQMNFKWLAESMSR 423 (562)
T ss_dssp -HHHHHHHHHHHHTSSS
T ss_pred -HHHHHHHHHHHHHcCC
Confidence 5567788888887664
No 269
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=31.27 E-value=27 Score=33.02 Aligned_cols=28 Identities=11% Similarity=0.287 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||+|-|+.+.+
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 9999999999999999999999987665
No 270
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=31.18 E-value=1.3e+02 Score=25.26 Aligned_cols=48 Identities=13% Similarity=-0.107 Sum_probs=21.4
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
+.||++++-.. +.. ....|-+|++..-.-.......+..+.++..+..
T Consensus 12 VTGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 60 (257)
T 3tpc_A 12 VTGASSGLGAA--VTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNA 60 (257)
T ss_dssp EESTTSHHHHH--HHHHHHHTTCEEEEEESSCC------------CEEEEC
T ss_pred EeCCCCHHHHH--HHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEc
Confidence 46777777665 233 3447888887654443334444444555555544
No 271
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=31.16 E-value=33 Score=31.93 Aligned_cols=28 Identities=11% Similarity=0.150 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||.|-++.+.+
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 8999999999999999999999987666
No 272
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=30.93 E-value=28 Score=32.91 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+.+.+.
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~~~ 124 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHTGR 124 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 89999999999999999999999877663
No 273
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=30.40 E-value=37 Score=31.71 Aligned_cols=28 Identities=14% Similarity=0.062 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||+|-|+-+.+
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 9999999999999999999999987665
No 274
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=30.37 E-value=31 Score=32.69 Aligned_cols=29 Identities=10% Similarity=0.240 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+-+.+.
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~ 109 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPINHTSE 109 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccccC
Confidence 89999999999999999999999876663
No 275
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=29.99 E-value=44 Score=29.92 Aligned_cols=38 Identities=16% Similarity=0.032 Sum_probs=32.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 189 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
-.+|.|...+.+.+.++++.|+++|+-|++|--|+++.
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 36788888889999999999999999999997665543
No 276
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=29.82 E-value=31 Score=32.73 Aligned_cols=29 Identities=10% Similarity=0.258 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+.+.+.
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 89999999999999999999999876653
No 277
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=29.51 E-value=26 Score=33.17 Aligned_cols=29 Identities=3% Similarity=0.127 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+-+.+.
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 89999999999999999999999876664
No 278
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=28.86 E-value=37 Score=33.41 Aligned_cols=31 Identities=16% Similarity=0.336 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.+.++++++++-|+++|+-||.|-++..++.
T Consensus 200 G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~ 230 (618)
T 3m07_A 200 GTPDDFKAFIDAAHGYGLSVVLDIVLNHFGP 230 (618)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSCCCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEeecCccCCC
Confidence 4589999999999999999999999988764
No 279
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=28.73 E-value=41 Score=32.32 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
.++++++++-|+++|+-||+|-|+-+.+..
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~ 121 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMNRG 121 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCcCCC
Confidence 999999999999999999999998776643
No 280
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=28.08 E-value=27 Score=32.50 Aligned_cols=30 Identities=10% Similarity=0.125 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
+.++++++++-|+++|+-||+|-|+.+.+.
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTF 102 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 399999999999999999999999877764
No 281
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=27.99 E-value=26 Score=33.19 Aligned_cols=28 Identities=14% Similarity=0.111 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||+|-|+-+.+
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 9999999999999999999999987664
No 282
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=27.68 E-value=2.4e+02 Score=22.73 Aligned_cols=143 Identities=17% Similarity=0.168 Sum_probs=79.3
Q ss_pred HHHHHHHHhhccCCCccCc--CCcccHHHHHHHHHHhcCCCCCcccCCceEEEecCChhhHHHH-HHHHHHHhC-CCCEE
Q 015283 56 VVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL-AAALIERYF-PGAKV 131 (410)
Q Consensus 56 ~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ggt~a~~~-~~~~~~~~~-~gd~V 131 (410)
.+.+...+..+.+....++ |.........++..++... ..+.+++..||++.... +..++..-. .|..|
T Consensus 11 sv~~la~~~~~~~~v~~~~~~~~~~~~~~~~a~~~l~~s~-------~~~~iv~g~ggs~~~~~~~a~L~~~a~~~Gr~V 83 (189)
T 2l8b_A 11 SVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDR-------PSLAIVSGQGGAAGQRERVAELVMMAREQGREV 83 (189)
T ss_dssp HHHHHHHHHHHHHTCCCCGGGCCCCHHHHHHHHHHHHHHS-------CCEECCBCSSCSHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhcCCcccCCcCccccCccchhHHHHHhccC-------CceEEEecccchHHHHHHHHHHHHHHHhcCeEE
Confidence 3444444544433212232 3445567888888886543 56777678888877766 222333333 88999
Q ss_pred EEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 015283 132 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 211 (410)
Q Consensus 132 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~ 211 (410)
.+..|+-..-....+..+.+-..+...- +.-+.. .+ .+...+|+ .. +--++.+|+..|.+.|++
T Consensus 84 ~vLAp~~~s~~~l~~~~~l~~~t~t~~~-----ll~~~~--~~---tp~s~lIV-D~-----AekLS~kE~~~Lld~A~~ 147 (189)
T 2l8b_A 84 QIIAADRRSQMNMKQDERLSGELITGRR-----QLLEGM--AF---TPGSTVIV-DQ-----GEKLSLKETLTLLDGAAR 147 (189)
T ss_dssp EEECSTTHHHHHHSCTTTCSSCSSSTTT-----TTTTSC--CC---CCCCEEEE-EE-----SSSHHHHHHHHHHHHHHH
T ss_pred EEEcCchHHHHHHHhhcCcCcceeehhh-----hhcCCC--CC---CCCCEEEE-ec-----hhhcCHHHHHHHHHHHHh
Confidence 9999998777666665554333332100 000100 00 12334444 22 335678889999998888
Q ss_pred cCC-ccccccc
Q 015283 212 KNH-IPFFDVA 221 (410)
Q Consensus 212 ~~~-~li~Dea 221 (410)
+|. +|++|.+
T Consensus 148 ~naqvvll~~~ 158 (189)
T 2l8b_A 148 HNVQVLITDSG 158 (189)
T ss_dssp TTCCEEEEESS
T ss_pred cCCEEEEeCCc
Confidence 754 3445555
No 283
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=27.50 E-value=28 Score=33.35 Aligned_cols=28 Identities=11% Similarity=0.151 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||+|-|+.+.+
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 9999999999999999999999987665
No 284
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=27.19 E-value=28 Score=33.07 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||.|-|+.+.+.
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s~ 130 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSSR 130 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCCC
Confidence 79999999999999999999999877663
No 285
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=27.02 E-value=2.3e+02 Score=23.76 Aligned_cols=40 Identities=18% Similarity=0.021 Sum_probs=21.7
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCC
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDAR 149 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g 149 (410)
+.||++++-.. +.. ....|..|++..-.-......+...+
T Consensus 32 VTGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 72 (260)
T 3gem_A 32 ITGASQRVGLH--CALRLLEHGHRVIISYRTEHASVTELRQAG 72 (260)
T ss_dssp ESSTTSHHHHH--HHHHHHHTTCCEEEEESSCCHHHHHHHHHT
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEeCChHHHHHHHHhcC
Confidence 46777777665 222 23478788876543333333344444
No 286
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=26.77 E-value=2.5e+02 Score=23.76 Aligned_cols=48 Identities=17% Similarity=0.054 Sum_probs=27.7
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
+.||++++-.. +.. ....|.+|++.+-.-.......+..+.++..+..
T Consensus 35 VTGas~GIG~a--ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~ 83 (281)
T 3ppi_A 35 VSGGAGGLGEA--TVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVST 83 (281)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEc
Confidence 46777777665 232 2447888888665433344444445555555554
No 287
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=26.76 E-value=2e+02 Score=25.37 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=47.0
Q ss_pred cChhhHHHHHhcCCCCcEEEEeCCCCCCCCCC--CCHHHHHHHHHHHHHcCCcccccccCCCCCCCCCCCchhHhHHHhh
Q 015283 165 LDFEGMIADIKAAPGGSFILLHGCAHNPTGID--PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 242 (410)
Q Consensus 165 ~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~--~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 242 (410)
+....|++++.. ...++.+++.|..|.|.- +... .+.++|.++|+.++.-+. .. +......+..
T Consensus 13 fa~~~L~~L~~~--~~~v~~Vvt~pd~~~grg~~l~~~---~v~~~A~~~gIpv~~~~~-----~~----~~~~~~~l~~ 78 (314)
T 3tqq_A 13 FAVPTLRALIDS--SHRVLAVYTQPDRPSGRGQKIMES---PVKEIARQNEIPIIQPFS-----LR----DEVEQEKLIA 78 (314)
T ss_dssp GGHHHHHHHHHS--SSEEEEEECCCC----------CC---HHHHHHHHTTCCEECCSC-----SS----SHHHHHHHHT
T ss_pred HHHHHHHHHHHC--CCeEEEEEeCCCCccccCCccCCC---HHHHHHHHcCCCEECccc-----CC----CHHHHHHHHh
Confidence 455677777764 235566678899998752 2222 455668999998653221 11 1112223334
Q ss_pred cCCcEEEEecccccccc---cCCCcceEEE
Q 015283 243 RGMELLVAQSYSKNLGL---YAERIGAMNV 269 (410)
Q Consensus 243 ~~~~~i~~~S~sK~~~~---~G~r~G~l~~ 269 (410)
...+++++.++.+.+.. .-.+.|.+.+
T Consensus 79 ~~~Dliv~~~~~~ilp~~il~~~~~g~iNi 108 (314)
T 3tqq_A 79 MNADVMVVVAYGLILPKKALNAFRLGCVNV 108 (314)
T ss_dssp TCCSEEEEESCCSCCCHHHHTSSTTCEEEE
T ss_pred cCCCEEEEcCcccccCHHHHhhCcCCEEEe
Confidence 45688888888866521 1234566643
No 288
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=26.57 E-value=56 Score=29.19 Aligned_cols=37 Identities=11% Similarity=0.071 Sum_probs=31.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 190 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 190 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.||.|...+.++..++++.|+++|+.+++|=-|+++.
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~w 86 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTW 86 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCC
Confidence 5788888889999999999999999999997665543
No 289
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=26.25 E-value=31 Score=33.93 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.+.++++++++-|+++|+-||.|-|+.+++.
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~ 232 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILDWVPGHFPT 232 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECTTSCCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecCcccC
Confidence 4489999999999999999999999988753
No 290
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=26.13 E-value=1.5e+02 Score=25.28 Aligned_cols=98 Identities=17% Similarity=0.095 Sum_probs=47.2
Q ss_pred ceEEEecCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc----C
Q 015283 102 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA----A 177 (410)
Q Consensus 102 ~i~~~~t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~ 177 (410)
.+++ +.||++++-... .......|.+|++.+-.-.......+..+.++..+..+ - -|.+.+.+.+.+ .
T Consensus 30 k~vl--VTGas~gIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-v----~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 30 KVAI--VTGAGAGIGLAV-ARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVD-V----SDEQQIIAMVDACVAAF 101 (277)
T ss_dssp CEEE--ETTTTSTHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECC-T----TCHHHHHHHHHHHHHHH
T ss_pred CEEE--EECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEec-C----CCHHHHHHHHHHHHHHc
Confidence 3444 477777776552 12234478888886644333444444445566555541 1 144444444332 1
Q ss_pred CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q 015283 178 PGGSFILLHGCAHNPTGI--DPTPEQWEKIADV 208 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~--~~~~~~l~~i~~~ 208 (410)
+ +.-+++++.-..+.+. ..+.+++++..+.
T Consensus 102 g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 102 G-GVDKLVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp S-SCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred C-CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 2 2334443332222221 3466777766543
No 291
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=25.81 E-value=1e+02 Score=26.21 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=49.5
Q ss_pred CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 015283 126 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 126 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i 205 (410)
..+=.|++....|.+....+...... +.+|+. .++|..|.-++.+...- .-..++++.. .++.++++++
T Consensus 74 A~~IsVlTd~~~F~gs~~dL~~ir~~-v~lPvL-rKDfi~~~~qi~ea~~~--GAD~ilLi~a-------~l~~~~l~~l 142 (251)
T 1i4n_A 74 ADAISILTEKHYFKGDPAFVRAARNL-TCRPIL-AKDFYIDTVQVKLASSV--GADAILIIAR-------ILTAEQIKEI 142 (251)
T ss_dssp CSEEEEECCCSSSCCCTHHHHHHHTT-CCSCEE-EECCCCSTHHHHHHHHT--TCSEEEEEGG-------GSCHHHHHHH
T ss_pred CCceEEEecccccCCCHHHHHHHHHh-CCCCEE-EeeCCCCHHHHHHHHHc--CCCEEEEecc-------cCCHHHHHHH
Confidence 44456666666776554444422211 244443 23466666666554332 2344444322 3667889999
Q ss_pred HHHHHHcCCccccccc
Q 015283 206 ADVIQEKNHIPFFDVA 221 (410)
Q Consensus 206 ~~~~~~~~~~li~Dea 221 (410)
.+.|++.|.-+++|-.
T Consensus 143 ~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 143 YEAAEELGMDSLVEVH 158 (251)
T ss_dssp HHHHHTTTCEEEEEEC
T ss_pred HHHHHHcCCeEEEEeC
Confidence 9999999988888755
No 292
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=25.77 E-value=3.3e+02 Score=23.71 Aligned_cols=13 Identities=8% Similarity=0.307 Sum_probs=10.3
Q ss_pred CCCEEEEcCCCCc
Q 015283 127 PGAKVLISSPTWG 139 (410)
Q Consensus 127 ~gd~Vl~~~p~y~ 139 (410)
.-|.|++..|.|.
T Consensus 109 Gadavlv~~P~y~ 121 (307)
T 3s5o_A 109 GADAAMVVTPCYY 121 (307)
T ss_dssp TCSEEEEECCCTT
T ss_pred CCCEEEEcCCCcC
Confidence 3499999888885
No 293
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=25.70 E-value=34 Score=33.56 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.+.++++++++-|+++|+-||.|-|+.+++.
T Consensus 190 Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~ 220 (602)
T 2bhu_A 190 GRPEDLMALVDAAHRLGLGVFLDVVYNHFGP 220 (602)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSCCCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeccccccc
Confidence 3489999999999999999999999988763
No 294
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=25.68 E-value=32 Score=32.62 Aligned_cols=28 Identities=11% Similarity=0.071 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||+|-|+-+.+
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 9999999999999999999999987664
No 295
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=25.49 E-value=34 Score=23.57 Aligned_cols=23 Identities=9% Similarity=-0.023 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHcCCccccccc
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Dea 221 (410)
..--++|.++|+++|+.++.|-.
T Consensus 26 ~~~A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 26 DAKALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp THHHHHHHHHHHHTTCCEEECHH
T ss_pred cHHHHHHHHHHHHcCCCEEeCHH
Confidence 33467888899999999998865
No 296
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=25.48 E-value=38 Score=33.48 Aligned_cols=31 Identities=3% Similarity=0.013 Sum_probs=27.5
Q ss_pred CCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
..+.++++++++-|+++|+-||.|-|+.+.+
T Consensus 282 ~Gt~~df~~LV~~aH~~GI~VIlD~V~NHts 312 (645)
T 4aef_A 282 LGGDRAFVDLLSELKRFDIKVILDGVFHHTS 312 (645)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cCCHHHHHHHHHHhhhcCCEEEEEecccccc
Confidence 3469999999999999999999999987655
No 297
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=25.38 E-value=41 Score=32.56 Aligned_cols=29 Identities=10% Similarity=0.242 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+-+.+.
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V~NHts~ 107 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVVINHSSD 107 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccc
Confidence 89999999999999999999999877763
No 298
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=25.38 E-value=35 Score=34.34 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 196 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
..+.++++++++-|+++|+-||.|-++..+..
T Consensus 309 yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~ 340 (722)
T 3k1d_A 309 FGTPDDFRALVDALHQAGIGVIVDWVPAHFPK 340 (722)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECTTCCCC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEEEeeccCC
Confidence 45689999999999999999999999887653
No 299
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=25.08 E-value=1.5e+02 Score=25.27 Aligned_cols=96 Identities=17% Similarity=0.120 Sum_probs=47.2
Q ss_pred ceEEEecCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc----
Q 015283 102 RVATVQGLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---- 176 (410)
Q Consensus 102 ~i~~~~t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---- 176 (410)
.+++ +.||++++-.. +.. ....|..|++.+-.-..........+.++..++.+ - -|.+.+++.+.+
T Consensus 28 k~vl--VTGas~GIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-v----~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 28 RVCI--VTGGGSGIGRA--TAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVD-V----SSAKDAESMVEKTTAK 98 (277)
T ss_dssp CEEE--EETTTSHHHHH--HHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECC-T----TCHHHHHHHHHHHHHH
T ss_pred CEEE--EECCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEec-C----CCHHHHHHHHHHHHHH
Confidence 4444 47777777665 233 34478888886644333334444445555555541 1 244555444432
Q ss_pred CCCCcEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 015283 177 APGGSFILLHGCAHNPTGI--DPTPEQWEKIAD 207 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG~--~~~~~~l~~i~~ 207 (410)
.+ +.-+++++.-..+.+. ..+.+++++..+
T Consensus 99 ~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 99 WG-RVDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp HS-CCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred cC-CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 12 2334443332222222 345666766643
No 300
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.98 E-value=42 Score=31.75 Aligned_cols=28 Identities=14% Similarity=0.143 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
.++++++++-|+++|+-||+|-|+-+.+
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 9999999999999999999999987665
No 301
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=24.76 E-value=36 Score=35.37 Aligned_cols=30 Identities=10% Similarity=0.096 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
.++++++++-|+++|+-||.|-||.+++..
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~NHt~~~ 560 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVYNHTFDV 560 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEcccccccc
Confidence 589999999999999999999999888754
No 302
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=24.73 E-value=43 Score=32.54 Aligned_cols=29 Identities=14% Similarity=0.274 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+.+.+.
T Consensus 92 ~~df~~lv~~aH~~Gi~VilD~V~NH~s~ 120 (570)
T 1m53_A 92 MEDFDSLVAEMKKRNMRLMIDVVINHTSD 120 (570)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccc
Confidence 89999999999999999999999877663
No 303
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=24.67 E-value=2.5e+02 Score=21.91 Aligned_cols=34 Identities=3% Similarity=-0.182 Sum_probs=23.1
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 178 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 178 ~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
.++.++++++. +|. -.+..+.++.++++|+.+|.
T Consensus 86 ~~~d~~i~iS~----sG~---t~~~~~~~~~ak~~g~~vi~ 119 (187)
T 3sho_A 86 RPTDLMIGVSV----WRY---LRDTVAALAGAAERGVPTMA 119 (187)
T ss_dssp CTTEEEEEECC----SSC---CHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEEeC----CCC---CHHHHHHHHHHHHCCCCEEE
Confidence 34677777644 344 35788888999998876553
No 304
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=24.35 E-value=1.8e+02 Score=24.64 Aligned_cols=48 Identities=8% Similarity=-0.007 Sum_probs=28.8
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
+.||++.+-.. +.. ....|..|++..-.-..........+.++..+..
T Consensus 10 VTGas~gIG~~--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 58 (281)
T 3m1a_A 10 VTGASSGFGRA--IAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL 58 (281)
T ss_dssp ETTTTSHHHHH--HHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEEC
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEe
Confidence 47778777665 233 3448888888765544455555555555555544
No 305
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=24.05 E-value=45 Score=27.86 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=17.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 191 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 191 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
-|||- ++.+.+++|.++|.+.|+-.|+=-+|+...
T Consensus 191 EPTGG-Idl~N~~~I~~i~l~aGv~~viPHIYssII 225 (249)
T 3m0z_A 191 EPTGG-IDLENYSEILKIALDAGVSKIIPHIYSSII 225 (249)
T ss_dssp EEBSS-CCTTTHHHHHHHHHHHTCSCBCCBCCGGGB
T ss_pred CCCCC-ccHhhHHHHHHHHHHcCCCeecccccceec
Confidence 44544 334445555555555555555555544443
No 306
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=23.83 E-value=37 Score=32.76 Aligned_cols=75 Identities=8% Similarity=0.014 Sum_probs=44.5
Q ss_pred hhhhCCCCccceeeecCCCcccChhhHHHHHhcCC--CCcEEE-EeCC--CCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 144 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP--GGSFIL-LHGC--AHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 144 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~--~~~~~i-i~~~--p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
.+..++.++....+.|+.+|.+.++..-++-.... ..+.+= ..+. -..|.|..++++|+++|++.|+++|+-||-
T Consensus 163 ~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 242 (543)
T 3rcn_A 163 VMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHITVIP 242 (543)
T ss_dssp HHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCEEee
Confidence 34456777777777666667666655544322100 000000 0000 123457789999999999999999987763
No 307
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=23.64 E-value=3e+02 Score=22.88 Aligned_cols=48 Identities=6% Similarity=-0.056 Sum_probs=26.1
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhh---hhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~ 157 (410)
+.||++++-.. +.. ....|-+|++.+-.-...... ++..|.++..+..
T Consensus 12 VTGas~GIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 63 (252)
T 3h7a_A 12 VIGAGDYIGAE--IAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63 (252)
T ss_dssp EECCSSHHHHH--HHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEEC
T ss_pred EECCCchHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEC
Confidence 46777777665 232 234788888866443333322 2334555555554
No 308
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=23.53 E-value=43 Score=33.07 Aligned_cols=31 Identities=6% Similarity=0.098 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHHHcC--C--cccccccCCCCCC
Q 015283 197 PTPEQWEKIADVIQEKN--H--IPFFDVAYQGFAS 227 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~--~--~li~Deay~~~~~ 227 (410)
.+.++++++++-|+++| + -||+|-|+.+++.
T Consensus 236 Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~~ 270 (637)
T 1ji1_A 236 GDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGD 270 (637)
T ss_dssp CCHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCCT
T ss_pred CCHHHHHHHHHHHHhCCCCccceEEEEECcccCCC
Confidence 45899999999999999 9 9999999877664
No 309
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=23.27 E-value=48 Score=32.10 Aligned_cols=29 Identities=17% Similarity=0.413 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+.+.+.
T Consensus 78 ~~df~~lv~~~h~~Gi~VilD~V~NH~s~ 106 (558)
T 1uok_A 78 MEDWDELLHEMHERNMKLMMDLVVNHTSD 106 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccc
Confidence 89999999999999999999999877653
No 310
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=23.18 E-value=46 Score=32.62 Aligned_cols=30 Identities=10% Similarity=0.173 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
+.++++++++-|+++|+-||+|-|+.+.+.
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~~ 226 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVLSHIGK 226 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECCcccCC
Confidence 489999999999999999999999876553
No 311
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=23.17 E-value=32 Score=33.37 Aligned_cols=30 Identities=27% Similarity=0.427 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
+.++++++++-|+++|+-||.|-++.+++.
T Consensus 166 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 195 (558)
T 3vgf_A 166 GPEGFRKLVDEAHKKGLGVILDVVYNHVGP 195 (558)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSCCCS
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEeeccccC
Confidence 389999999999999999999999877763
No 312
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=23.06 E-value=37 Score=31.78 Aligned_cols=29 Identities=17% Similarity=0.303 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 226 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~ 226 (410)
+.++++++++-|+++|+-||+|-++-+.+
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 48999999999999999999999976555
No 313
>2gm5_A Transposon gamma-delta resolvase; site specific recombination, recombin; 2.10A {Escherichia coli} PDB: 2rsl_A 1gdr_A 1ght_A 1hx7_A
Probab=22.72 E-value=2.4e+02 Score=21.06 Aligned_cols=20 Identities=0% Similarity=-0.104 Sum_probs=13.5
Q ss_pred CHHHHHHHHHHHHHcCCccc
Q 015283 198 TPEQWEKIADVIQEKNHIPF 217 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li 217 (410)
+..++..+++.+.++|+-|+
T Consensus 71 ~~~d~~~~~~~l~~~gv~l~ 90 (139)
T 2gm5_A 71 DTADMIQLIKEFDAQGVSIR 90 (139)
T ss_dssp SHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEE
Confidence 35667777777777776654
No 314
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=22.54 E-value=27 Score=34.53 Aligned_cols=29 Identities=10% Similarity=0.076 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||.|-||.+++.
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V~nH~~~ 209 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFIPRTAAR 209 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEET
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCCcC
Confidence 78999999999999999999999876654
No 315
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=22.51 E-value=39 Score=34.20 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 197 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
.+.++++++++-|+++|+-||.|-|+.++...
T Consensus 248 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~ 279 (755)
T 3aml_A 248 GTPEDLKYLVDKAHSLGLRVLMDVVHSHASNN 279 (755)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSCBCCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 45899999999999999999999999887643
No 316
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.11 E-value=41 Score=30.65 Aligned_cols=70 Identities=7% Similarity=-0.006 Sum_probs=40.1
Q ss_pred hhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEE--eCC--CCCCCCCCCCHHHHHHHHHHHHHcCCcccc
Q 015283 143 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL--HGC--AHNPTGIDPTPEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 143 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii--~~~--p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 218 (410)
..+..+++++....+.+..+|.+..+.+-.... .. +. ... ...+.+..++++|+++|++.|+++|+-||-
T Consensus 40 d~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~----~~--~~~~~g~~~~~~~~~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 40 DTISLSGGNFLHLHFSDHENYAIESHLLNQRAE----NA--VQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp HHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGG----GS--EECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCcEEEEEEEcCCCceeeecchhhhhh----hh--ccccCCCcCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 344466777777777555556655432211000 00 00 000 112234569999999999999999998773
No 317
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=21.96 E-value=1.3e+02 Score=27.41 Aligned_cols=79 Identities=5% Similarity=-0.069 Sum_probs=37.7
Q ss_pred hCCCCEEEEcCCCCcch----------hhhhhhCCCCccceeeecCC-Cc--c---cChhhHHHHHhcCCCCcEEEEeCC
Q 015283 125 YFPGAKVLISSPTWGNH----------KNIFNDARVPWSEYRYYDPK-TV--G---LDFEGMIADIKAAPGGSFILLHGC 188 (410)
Q Consensus 125 ~~~gd~Vl~~~p~y~~~----------~~~~~~~g~~~~~v~~~~~~-~~--~---~d~~~l~~~i~~~~~~~~~ii~~~ 188 (410)
+++||+|-+.+|+.+.. ...++..|.+++.-+..... .+ + -..++|.+++.. +...+|+...
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~D--p~i~aI~~~r 117 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYN--PDITCIMSTI 117 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTC--TTEEEEEESC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhC--CCCCEEEEcc
Confidence 45677777777765431 22344566666554432111 11 1 124455555554 4556666444
Q ss_pred CCCCCCCCCCHHHHHHH
Q 015283 189 AHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i 205 (410)
-..-+-.+++.=+++.|
T Consensus 118 GGyga~rlLp~LD~~~i 134 (371)
T 3tla_A 118 GGDNSNSLLPFLDYDAI 134 (371)
T ss_dssp CCSCGGGGGGGSCHHHH
T ss_pred ccccHHHHHhhcChhhH
Confidence 34334444444344443
No 318
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=21.82 E-value=2.9e+02 Score=23.21 Aligned_cols=49 Identities=10% Similarity=-0.056 Sum_probs=28.4
Q ss_pred cCChhhHHHHHHHHHHHhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
+.||++++-... .......|.+|++.+-.-.......+..+.++..+..
T Consensus 16 VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 64 (271)
T 3tzq_B 16 ITGACGGIGLET-SRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV 64 (271)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEEC
T ss_pred EECCCcHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEEC
Confidence 467777776552 1223447888888765544444455545655555554
No 319
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=21.80 E-value=55 Score=32.86 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
.++++++++-|+++|+-||.|-||.+.+..
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~NH~~~~ 295 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYNHTAEG 295 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccCc
Confidence 689999999999999999999999877743
No 320
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=21.65 E-value=54 Score=32.03 Aligned_cols=30 Identities=13% Similarity=0.038 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
+.++++++++-|+++|+-||+|-|+.+.+.
T Consensus 86 t~~df~~lv~~~h~~Gi~VilD~V~NH~~~ 115 (589)
T 3aj7_A 86 TNEDCFALIEKTHKLGMKFITDLVINHCSS 115 (589)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccccccc
Confidence 389999999999999999999999877763
No 321
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=21.57 E-value=1.7e+02 Score=24.71 Aligned_cols=48 Identities=19% Similarity=0.046 Sum_probs=28.0
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
+.||++++-.. +.. ....|-.|++..-.-.......+..+.++..+..
T Consensus 32 VTGas~gIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 80 (266)
T 3grp_A 32 VTGATGGIGEA--IARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSA 80 (266)
T ss_dssp ESSTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEEC
T ss_pred EeCCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEe
Confidence 47777777665 233 3447888887654433344444455666655554
No 322
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=21.43 E-value=1.1e+02 Score=27.26 Aligned_cols=79 Identities=9% Similarity=-0.026 Sum_probs=41.5
Q ss_pred hCCCCEEEEcCCCCcc-------h---hhhhhhCCCCccceeeecCC-Cc--c---cChhhHHHHHhcCCCCcEEEEeCC
Q 015283 125 YFPGAKVLISSPTWGN-------H---KNIFNDARVPWSEYRYYDPK-TV--G---LDFEGMIADIKAAPGGSFILLHGC 188 (410)
Q Consensus 125 ~~~gd~Vl~~~p~y~~-------~---~~~~~~~g~~~~~v~~~~~~-~~--~---~d~~~l~~~i~~~~~~~~~ii~~~ 188 (410)
+++||+|-+.+|+.+. + ...++..|.+++.-+..... .+ + -..++|.+++.. +...+|+...
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~D--p~i~aI~~~r 86 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFND--SSVKAILTVI 86 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHC--TTEEEEEESC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhC--CCCCEEEEcC
Confidence 5689999998887642 1 23455678777654432111 11 1 124455566665 4566666544
Q ss_pred CCCCCCCCCCHHHHHHH
Q 015283 189 AHNPTGIDPTPEQWEKI 205 (410)
Q Consensus 189 p~NPtG~~~~~~~l~~i 205 (410)
-..-+-.+++.=+.+.|
T Consensus 87 GG~g~~rlL~~LD~~~i 103 (327)
T 4h1h_A 87 GGFNSNQLLPYLDYDLI 103 (327)
T ss_dssp CCSCGGGGGGGCCHHHH
T ss_pred CchhHHHHhhhcchhhh
Confidence 34334444444344433
No 323
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=21.39 E-value=1.8e+02 Score=24.76 Aligned_cols=78 Identities=8% Similarity=0.019 Sum_probs=49.6
Q ss_pred EEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 015283 130 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 209 (410)
Q Consensus 130 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ii~~~p~NPtG~~~~~~~l~~i~~~~ 209 (410)
.|++....|.+....+.... +.+.+|+. .++|-+|.-++.+.-.- ....++++. .+++.++++++.++|
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr-~~v~lPvL-rKDFiid~yQI~eAr~~--GADaILLI~-------a~L~~~~l~~l~~~A 149 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIA-SSVSIPIL-MSDFIVKESQIDDAYNL--GADTVLLIV-------KILTERELESLLEYA 149 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHH-TTCSSCEE-EESCCCSHHHHHHHHHH--TCSEEEEEG-------GGSCHHHHHHHHHHH
T ss_pred EEeCCCCCCCCCHHHHHHHH-HhcCCCEe-eccccccHHHHHHHHHc--CCCeeehHH-------hhcCHHHHHHHHHHH
Confidence 56666677777666555332 12345553 35688888887554332 234444432 246688999999999
Q ss_pred HHcCCcccc
Q 015283 210 QEKNHIPFF 218 (410)
Q Consensus 210 ~~~~~~li~ 218 (410)
++.|+-+++
T Consensus 150 ~~lGl~~Lv 158 (258)
T 4a29_A 150 RSYGMEPLI 158 (258)
T ss_dssp HHTTCCCEE
T ss_pred HHHhHHHHH
Confidence 999987776
No 324
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=21.30 E-value=61 Score=32.76 Aligned_cols=30 Identities=17% Similarity=0.405 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
.++++++++-|+++|+-||.|-||.+.+..
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~~ 301 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYNHTAEG 301 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSCTTC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccCc
Confidence 799999999999999999999999877643
No 325
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=21.30 E-value=52 Score=31.73 Aligned_cols=29 Identities=3% Similarity=0.035 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+-+.+.
T Consensus 78 ~~df~~lv~~~h~~Gi~VilD~V~NH~s~ 106 (543)
T 2zic_A 78 MADMDNLLTQAKMRGIKIIMDLVVNHTSD 106 (543)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCcccc
Confidence 88999999999999999999999876653
No 326
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=21.25 E-value=89 Score=18.72 Aligned_cols=26 Identities=23% Similarity=0.404 Sum_probs=20.5
Q ss_pred eEEecCCCcccHHHHHHHHHHHhhhc
Q 015283 384 RISLAGLSLAKCEYLADAIIDSYHNV 409 (410)
Q Consensus 384 Ris~~~~~~~~i~~~~~~l~~~l~~~ 409 (410)
|||+..-+..+-+.+...|.+++.++
T Consensus 5 risitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 5 RISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecchhHHHHHHHHHHHHHHHh
Confidence 78877668888888888888887654
No 327
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=21.24 E-value=45 Score=33.09 Aligned_cols=30 Identities=7% Similarity=0.110 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFASG 228 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 228 (410)
.++++++++-|+++|+-||.|-||.+.+..
T Consensus 241 ~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~ 270 (657)
T 2wsk_A 241 LDEFRDAIKALHKAGIEVILDIVLNHSAEL 270 (657)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCTTC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecccccc
Confidence 799999999999999999999999887754
No 328
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=20.96 E-value=46 Score=28.93 Aligned_cols=24 Identities=4% Similarity=0.259 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHcCCccccccc
Q 015283 198 TPEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~Dea 221 (410)
..+.++++++.|.++|+++|+|--
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 378899999999999999999854
No 329
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=20.95 E-value=53 Score=31.76 Aligned_cols=29 Identities=3% Similarity=0.165 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCcccccccCCCCCC
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 227 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Deay~~~~~ 227 (410)
.++++++++-|+++|+-||+|-|+.+.+.
T Consensus 78 ~~d~~~lv~~~h~~Gi~vilD~V~NH~~~ 106 (555)
T 2ze0_A 78 MDDFDELLAQAHRRGLKVILDLVINHTSD 106 (555)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccc
Confidence 89999999999999999999999877653
No 330
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=20.94 E-value=2.5e+02 Score=25.03 Aligned_cols=115 Identities=11% Similarity=0.091 Sum_probs=51.5
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHHhc--
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA-- 176 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-- 176 (410)
+..+..+.-..|+|=-.++..+.... .+|..|+..+.........++..|.....+.+.... +.+++.+.+..
T Consensus 60 ~G~iv~I~G~pGsGKTtLal~la~~~~~~g~~vlyi~~E~~~~~~~a~~lG~~~~~l~i~~~~----~~e~~l~~~~~l~ 135 (349)
T 2zr9_A 60 RGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPD----TGEQALEIADMLV 135 (349)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCS----SHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEECCCCcCHHHHHHcCCCHHHeEEecCC----CHHHHHHHHHHHH
Confidence 44554433444555444433333332 356666655543332233455667665554443222 34444333221
Q ss_pred CCCCcEEEEeCCCCCCCC------CCCC----------HHHHHHHHHHHHHcCCcccc
Q 015283 177 APGGSFILLHGCAHNPTG------IDPT----------PEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 177 ~~~~~~~ii~~~p~NPtG------~~~~----------~~~l~~i~~~~~~~~~~li~ 218 (410)
......++++.++..-.. ..-+ ...+.++..+++++|+.+|+
T Consensus 136 ~~~~~~lIVIDsl~~l~~~~e~~~~~gd~~~~~q~r~~~~~l~~L~~~a~~~~~tVI~ 193 (349)
T 2zr9_A 136 RSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIF 193 (349)
T ss_dssp TTTCCSEEEEECGGGCCCHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred hcCCCCEEEEcChHhhcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 012344555555543321 1001 12356666667888776654
No 331
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=20.86 E-value=47 Score=23.42 Aligned_cols=23 Identities=13% Similarity=-0.061 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHcCCccccccc
Q 015283 199 PEQWEKIADVIQEKNHIPFFDVA 221 (410)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~Dea 221 (410)
..--++|.++|+++|+.++.|-.
T Consensus 26 ~~~A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 26 NQCALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHHHHTTCCEEECHH
T ss_pred cHHHHHHHHHHHHcCCCEEECHH
Confidence 44567889999999999998865
No 332
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=20.68 E-value=2.1e+02 Score=23.88 Aligned_cols=48 Identities=13% Similarity=0.006 Sum_probs=26.6
Q ss_pred cCChhhHHHHHHHHHH-HhCCCCEEEEcCCCCcchhhhhhhCCCCccceee
Q 015283 108 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 157 (410)
Q Consensus 108 t~ggt~a~~~~~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 157 (410)
+.||++.+-.. +.. ....|.+|++.+-.-..........+.++..+..
T Consensus 13 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 61 (259)
T 4e6p_A 13 ITGSARGIGRA--FAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQM 61 (259)
T ss_dssp EETCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC
T ss_pred EECCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEe
Confidence 46777777665 222 3447888888665433334444444545544444
No 333
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=20.14 E-value=2.5e+02 Score=25.12 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=52.1
Q ss_pred CCceEEEecCChhhHHHHHHHHHHHh-CCCCEEEEcCCCCcchhhhhhhCCCCccceeeecCCCcccChhhHHHHH----
Q 015283 100 EQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI---- 174 (410)
Q Consensus 100 ~~~i~~~~t~ggt~a~~~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i---- 174 (410)
+..+..+.-..|+|=-.++..+.... ..|..|+..+.....-...+...|.....+.+.+.. +.+.+.+.+
T Consensus 62 ~G~ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~~~~~a~~~g~~~~~l~i~~~~----~~e~~~~~~~~l~ 137 (356)
T 1u94_A 62 MGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPD----TGEQALEICDALA 137 (356)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCS----SHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCccHHHHHHcCCChhheeeeCCC----CHHHHHHHHHHHH
Confidence 44555533455555444443344333 356667665544332233345666655444443222 234333332
Q ss_pred hcCCCCcEEEEeCCCCCCCC------CCCC----------HHHHHHHHHHHHHcCCcccc
Q 015283 175 KAAPGGSFILLHGCAHNPTG------IDPT----------PEQWEKIADVIQEKNHIPFF 218 (410)
Q Consensus 175 ~~~~~~~~~ii~~~p~NPtG------~~~~----------~~~l~~i~~~~~~~~~~li~ 218 (410)
.+. ...++++.++..-.. ..-+ ...+.+|..+++++++.+|+
T Consensus 138 ~~~--~~~lVVIDsl~~l~~~~e~~~~~g~~~~~~q~r~~~~~l~~L~~~a~~~~~~VI~ 195 (356)
T 1u94_A 138 RSG--AVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIF 195 (356)
T ss_dssp HHT--CCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred hcc--CCCEEEEcCHHHhcchhhhccccccchhHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 221 233444455443321 1001 12256677778888877664
Done!