Query 015287
Match_columns 410
No_of_seqs 251 out of 1746
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 09:57:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015287.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015287hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k92_A NAD-GDH, NAD-specific g 100.0 2E-130 6E-135 1001.6 42.7 407 2-409 16-423 (424)
2 3r3j_A Glutamate dehydrogenase 100.0 9E-126 3E-130 970.8 41.2 408 2-409 32-455 (456)
3 3aog_A Glutamate dehydrogenase 100.0 6E-125 2E-129 965.5 45.1 409 1-409 29-438 (440)
4 3aoe_E Glutamate dehydrogenase 100.0 2E-124 6E-129 958.5 43.0 404 2-409 13-417 (419)
5 2yfq_A Padgh, NAD-GDH, NAD-spe 100.0 1E-124 4E-129 961.6 40.9 408 2-409 6-420 (421)
6 3mw9_A GDH 1, glutamate dehydr 100.0 9E-124 3E-128 963.0 45.3 408 2-410 8-499 (501)
7 2bma_A Glutamate dehydrogenase 100.0 3E-123 1E-127 956.0 41.3 408 2-409 45-469 (470)
8 1v9l_A Glutamate dehydrogenase 100.0 3E-123 9E-128 950.3 40.1 409 1-409 4-420 (421)
9 2tmg_A Protein (glutamate dehy 100.0 3E-122 9E-127 942.4 47.1 409 1-409 3-413 (415)
10 4fcc_A Glutamate dehydrogenase 100.0 1E-121 4E-126 941.1 41.0 407 3-409 27-449 (450)
11 1bgv_A Glutamate dehydrogenase 100.0 2E-119 7E-124 926.6 39.6 408 2-409 20-447 (449)
12 1gtm_A Glutamate dehydrogenase 100.0 7E-109 2E-113 847.1 44.0 409 1-409 3-416 (419)
13 1c1d_A L-phenylalanine dehydro 100.0 4.2E-90 1.4E-94 693.4 31.0 336 29-407 8-352 (355)
14 1leh_A Leucine dehydrogenase; 100.0 4.7E-86 1.6E-90 667.1 28.7 336 29-409 10-352 (364)
15 3ing_A Homoserine dehydrogenas 98.2 3.3E-06 1.1E-10 83.6 8.8 171 205-386 3-200 (325)
16 2o4c_A Erythronate-4-phosphate 98.0 8.1E-05 2.8E-09 75.1 14.0 156 138-331 62-229 (380)
17 3do5_A HOM, homoserine dehydro 97.8 8.2E-05 2.8E-09 73.6 9.6 169 207-386 3-199 (327)
18 3n58_A Adenosylhomocysteinase; 97.7 0.00013 4.4E-09 75.0 11.1 108 187-314 227-337 (464)
19 2d5c_A AROE, shikimate 5-dehyd 97.7 0.00056 1.9E-08 64.7 14.6 133 195-348 106-243 (263)
20 3h9u_A Adenosylhomocysteinase; 97.7 0.00032 1.1E-08 71.9 12.5 98 198-315 203-302 (436)
21 3d4o_A Dipicolinate synthase s 97.6 0.00035 1.2E-08 67.4 12.0 115 196-331 145-263 (293)
22 3gvp_A Adenosylhomocysteinase 97.6 0.00031 1.1E-08 71.9 11.9 109 187-315 200-311 (435)
23 1vl6_A Malate oxidoreductase; 97.6 0.00041 1.4E-08 70.0 11.4 122 184-315 170-297 (388)
24 1nyt_A Shikimate 5-dehydrogena 97.5 0.0028 9.7E-08 60.3 16.5 126 185-331 102-235 (271)
25 2rir_A Dipicolinate synthase, 97.4 0.00068 2.3E-08 65.5 10.9 116 198-334 149-270 (300)
26 3jtm_A Formate dehydrogenase, 97.4 0.004 1.4E-07 62.1 16.4 115 201-335 159-283 (351)
27 3oet_A Erythronate-4-phosphate 97.4 0.00045 1.5E-08 69.7 9.5 172 183-378 96-281 (381)
28 4e5n_A Thermostable phosphite 97.4 0.0013 4.3E-08 65.0 12.4 109 201-329 140-256 (330)
29 2w2k_A D-mandelate dehydrogena 97.4 0.0021 7.2E-08 63.8 13.9 116 201-336 158-284 (348)
30 2j6i_A Formate dehydrogenase; 97.4 0.0019 6.6E-08 64.5 13.6 115 201-335 159-284 (364)
31 2ekl_A D-3-phosphoglycerate de 97.4 0.0051 1.7E-07 60.1 16.3 108 201-329 137-252 (313)
32 2a9f_A Putative malic enzyme ( 97.3 0.00047 1.6E-08 69.8 8.5 122 184-313 166-291 (398)
33 2hk9_A Shikimate dehydrogenase 97.3 0.004 1.4E-07 59.4 14.5 141 184-349 111-257 (275)
34 1b0a_A Protein (fold bifunctio 97.3 0.0035 1.2E-07 60.8 13.9 53 182-239 139-192 (288)
35 3c8m_A Homoserine dehydrogenas 97.3 0.00025 8.5E-09 70.1 5.9 173 206-386 6-204 (331)
36 2egg_A AROE, shikimate 5-dehyd 97.2 0.0056 1.9E-07 59.3 14.5 129 185-333 123-262 (297)
37 1mx3_A CTBP1, C-terminal bindi 97.2 0.00061 2.1E-08 67.8 7.7 107 202-329 164-279 (347)
38 3l6d_A Putative oxidoreductase 97.2 0.012 4.2E-07 56.7 16.3 174 203-396 6-212 (306)
39 2d0i_A Dehydrogenase; structur 97.1 0.0034 1.2E-07 61.9 12.5 107 202-329 142-255 (333)
40 1p77_A Shikimate 5-dehydrogena 97.1 0.0042 1.4E-07 59.2 12.4 129 186-333 103-238 (272)
41 3gg9_A D-3-phosphoglycerate de 97.1 0.0053 1.8E-07 61.1 13.5 108 201-329 155-271 (352)
42 1a4i_A Methylenetetrahydrofola 97.1 0.0055 1.9E-07 59.8 13.1 96 181-315 144-241 (301)
43 4g2n_A D-isomer specific 2-hyd 97.1 0.0024 8.4E-08 63.5 10.8 115 201-337 168-292 (345)
44 2gcg_A Glyoxylate reductase/hy 97.1 0.0032 1.1E-07 61.9 11.5 108 202-329 151-266 (330)
45 4hy3_A Phosphoglycerate oxidor 97.1 0.0035 1.2E-07 62.9 11.8 114 202-336 172-293 (365)
46 1gdh_A D-glycerate dehydrogena 97.0 0.0069 2.4E-07 59.3 13.3 107 202-329 142-258 (320)
47 1wwk_A Phosphoglycerate dehydr 97.0 0.0054 1.8E-07 59.8 12.4 107 202-329 138-252 (307)
48 2g76_A 3-PGDH, D-3-phosphoglyc 97.0 0.0097 3.3E-07 58.8 14.3 108 201-329 160-275 (335)
49 2pi1_A D-lactate dehydrogenase 97.0 0.00061 2.1E-08 67.5 5.6 107 201-329 136-250 (334)
50 1xdw_A NAD+-dependent (R)-2-hy 97.0 0.0014 4.7E-08 64.7 8.0 105 202-329 142-254 (331)
51 3ond_A Adenosylhomocysteinase; 97.0 0.0056 1.9E-07 63.5 12.8 106 188-313 246-354 (488)
52 2h78_A Hibadh, 3-hydroxyisobut 97.0 0.017 5.8E-07 55.2 15.2 167 207-395 4-208 (302)
53 3evt_A Phosphoglycerate dehydr 96.9 0.0042 1.4E-07 61.2 10.9 114 201-335 132-254 (324)
54 2nac_A NAD-dependent formate d 96.9 0.025 8.5E-07 57.2 16.7 109 201-329 186-303 (393)
55 2c2x_A Methylenetetrahydrofola 96.9 0.0094 3.2E-07 57.6 12.7 54 181-239 137-193 (281)
56 1ebf_A Homoserine dehydrogenas 96.9 0.00082 2.8E-08 67.2 5.3 171 206-386 4-205 (358)
57 1ygy_A PGDH, D-3-phosphoglycer 96.9 0.0032 1.1E-07 66.0 9.9 108 201-329 137-252 (529)
58 1v8b_A Adenosylhomocysteinase; 96.9 0.0073 2.5E-07 62.6 12.4 97 199-315 250-348 (479)
59 2dbq_A Glyoxylate reductase; D 96.8 0.013 4.5E-07 57.6 13.6 108 201-329 145-260 (334)
60 1dxy_A D-2-hydroxyisocaproate 96.8 0.0026 8.8E-08 62.8 8.4 106 201-329 140-253 (333)
61 3hg7_A D-isomer specific 2-hyd 96.8 0.003 1E-07 62.3 8.8 107 201-329 135-250 (324)
62 3d64_A Adenosylhomocysteinase; 96.8 0.0045 1.5E-07 64.4 10.5 107 199-325 270-380 (494)
63 3pef_A 6-phosphogluconate dehy 96.8 0.027 9.3E-07 53.5 15.3 169 207-397 2-208 (287)
64 4e21_A 6-phosphogluconate dehy 96.8 0.0027 9.3E-08 63.3 8.4 109 204-332 20-138 (358)
65 2yq5_A D-isomer specific 2-hyd 96.8 0.0045 1.5E-07 61.5 9.8 112 201-335 143-263 (343)
66 3ba1_A HPPR, hydroxyphenylpyru 96.8 0.012 4E-07 58.2 12.7 110 201-335 159-278 (333)
67 3g0o_A 3-hydroxyisobutyrate de 96.7 0.0081 2.8E-07 57.8 11.0 171 205-395 6-214 (303)
68 3pwz_A Shikimate dehydrogenase 96.7 0.022 7.6E-07 54.6 13.9 124 186-331 103-236 (272)
69 2cuk_A Glycerate dehydrogenase 96.7 0.0091 3.1E-07 58.3 11.1 100 202-328 140-247 (311)
70 3o8q_A Shikimate 5-dehydrogena 96.7 0.024 8.1E-07 54.6 13.8 126 186-331 110-242 (281)
71 3l07_A Bifunctional protein fo 96.7 0.0047 1.6E-07 59.9 8.6 54 181-239 140-194 (285)
72 4dgs_A Dehydrogenase; structur 96.6 0.012 4.1E-07 58.4 11.7 104 201-329 166-278 (340)
73 3llv_A Exopolyphosphatase-rela 96.6 0.0026 9E-08 53.7 6.0 106 205-329 5-118 (141)
74 4gbj_A 6-phosphogluconate dehy 96.6 0.0047 1.6E-07 59.8 8.5 169 207-395 6-209 (297)
75 3fwz_A Inner membrane protein 96.6 0.0045 1.6E-07 52.6 7.2 104 207-329 8-120 (140)
76 3obb_A Probable 3-hydroxyisobu 96.6 0.0056 1.9E-07 59.5 8.7 167 207-395 4-208 (300)
77 4dll_A 2-hydroxy-3-oxopropiona 96.6 0.0065 2.2E-07 59.1 9.2 170 204-395 29-234 (320)
78 3p2o_A Bifunctional protein fo 96.6 0.0057 1.9E-07 59.3 8.5 54 181-239 139-193 (285)
79 1nvt_A Shikimate 5'-dehydrogen 96.5 0.029 9.8E-07 53.7 13.1 131 184-332 110-251 (287)
80 3k5p_A D-3-phosphoglycerate de 96.5 0.04 1.4E-06 56.1 14.5 110 201-334 151-270 (416)
81 3dtt_A NADP oxidoreductase; st 96.5 0.0038 1.3E-07 58.4 6.6 106 200-313 13-126 (245)
82 4gwg_A 6-phosphogluconate dehy 96.5 0.0038 1.3E-07 64.8 7.1 175 205-395 3-221 (484)
83 4a26_A Putative C-1-tetrahydro 96.5 0.0077 2.6E-07 58.8 8.7 54 180-238 143-197 (300)
84 1qp8_A Formate dehydrogenase; 96.5 0.01 3.5E-07 57.7 9.6 102 203-329 121-230 (303)
85 3c85_A Putative glutathione-re 96.4 0.006 2.1E-07 53.9 7.2 109 202-329 35-154 (183)
86 3jyo_A Quinate/shikimate dehyd 96.4 0.031 1E-06 53.9 12.7 130 185-331 110-249 (283)
87 4a5o_A Bifunctional protein fo 96.4 0.0081 2.8E-07 58.2 8.4 52 182-238 141-193 (286)
88 3gvx_A Glycerate dehydrogenase 96.4 0.0091 3.1E-07 57.9 8.7 102 203-329 119-229 (290)
89 1sc6_A PGDH, D-3-phosphoglycer 96.4 0.048 1.6E-06 55.2 14.4 105 201-329 140-253 (404)
90 3pp8_A Glyoxylate/hydroxypyruv 96.4 0.0038 1.3E-07 61.3 6.1 107 202-329 135-249 (315)
91 3ce6_A Adenosylhomocysteinase; 96.4 0.014 4.8E-07 60.7 10.6 94 201-314 269-364 (494)
92 2g82_O GAPDH, glyceraldehyde-3 96.3 0.044 1.5E-06 54.1 13.2 32 207-238 1-32 (331)
93 1gq2_A Malic enzyme; oxidoredu 96.3 0.011 3.6E-07 62.0 8.9 175 112-312 204-396 (555)
94 2dvm_A Malic enzyme, 439AA lon 96.3 0.01 3.4E-07 60.9 8.7 135 191-331 171-315 (439)
95 1j4a_A D-LDH, D-lactate dehydr 96.3 0.0033 1.1E-07 62.0 4.9 105 202-329 142-255 (333)
96 3doj_A AT3G25530, dehydrogenas 96.3 0.0098 3.4E-07 57.5 8.2 172 204-397 19-228 (310)
97 3fbt_A Chorismate mutase and s 96.2 0.042 1.4E-06 53.0 12.5 123 186-332 106-235 (282)
98 3qha_A Putative oxidoreductase 96.2 0.0023 7.7E-08 61.6 3.5 167 207-394 16-215 (296)
99 2i99_A MU-crystallin homolog; 96.2 0.025 8.4E-07 55.0 10.8 114 203-333 132-249 (312)
100 4ezb_A Uncharacterized conserv 96.2 0.016 5.4E-07 56.4 9.3 168 207-389 25-224 (317)
101 2zyd_A 6-phosphogluconate dehy 96.2 0.0098 3.3E-07 61.5 8.0 175 204-395 13-231 (480)
102 1rm4_O Glyceraldehyde 3-phosph 96.2 0.052 1.8E-06 53.7 12.9 32 207-238 2-36 (337)
103 2dc1_A L-aspartate dehydrogena 96.1 0.0068 2.3E-07 56.2 5.8 98 207-330 1-105 (236)
104 3tnl_A Shikimate dehydrogenase 96.1 0.06 2.1E-06 52.7 12.9 132 185-331 137-283 (315)
105 3qy9_A DHPR, dihydrodipicolina 96.1 0.019 6.5E-07 54.3 8.8 100 207-334 4-109 (243)
106 3uuw_A Putative oxidoreductase 96.1 0.0065 2.2E-07 58.3 5.8 108 204-332 4-122 (308)
107 1lss_A TRK system potassium up 96.0 0.011 3.9E-07 48.9 6.5 33 205-238 3-35 (140)
108 3ngx_A Bifunctional protein fo 96.0 0.016 5.4E-07 55.9 8.2 52 181-239 131-183 (276)
109 3pdu_A 3-hydroxyisobutyrate de 96.0 0.008 2.7E-07 57.2 6.0 169 207-397 2-208 (287)
110 3b1j_A Glyceraldehyde 3-phosph 96.0 0.088 3E-06 52.1 13.6 32 207-238 3-37 (339)
111 1pj3_A NAD-dependent malic enz 96.0 0.013 4.4E-07 61.5 7.8 177 112-312 206-401 (564)
112 2ho3_A Oxidoreductase, GFO/IDH 95.9 0.0093 3.2E-07 57.7 6.3 109 207-332 2-118 (325)
113 1o0s_A NAD-ME, NAD-dependent m 95.9 0.012 4.2E-07 61.9 7.4 177 112-315 242-436 (605)
114 3l9w_A Glutathione-regulated p 95.9 0.035 1.2E-06 56.3 10.5 105 206-329 4-117 (413)
115 3oj0_A Glutr, glutamyl-tRNA re 95.9 0.044 1.5E-06 46.5 9.6 67 206-290 21-89 (144)
116 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.9 0.011 3.9E-07 60.9 7.0 177 207-396 2-221 (478)
117 1gpj_A Glutamyl-tRNA reductase 95.8 0.031 1.1E-06 56.3 9.9 110 203-334 164-289 (404)
118 3d1l_A Putative NADP oxidoredu 95.8 0.0064 2.2E-07 57.0 4.5 107 203-328 7-119 (266)
119 1hdg_O Holo-D-glyceraldehyde-3 95.8 0.094 3.2E-06 51.8 13.0 32 207-238 1-35 (332)
120 1edz_A 5,10-methylenetetrahydr 95.8 0.021 7.3E-07 56.1 8.2 118 180-314 146-278 (320)
121 2glx_A 1,5-anhydro-D-fructose 95.8 0.014 4.7E-07 56.4 6.8 107 207-332 1-118 (332)
122 3cps_A Glyceraldehyde 3-phosph 95.8 0.073 2.5E-06 53.0 12.1 31 207-237 18-49 (354)
123 2d2i_A Glyceraldehyde 3-phosph 95.7 0.093 3.2E-06 52.8 12.7 32 207-238 3-37 (380)
124 3don_A Shikimate dehydrogenase 95.7 0.028 9.5E-07 54.1 8.6 122 185-331 100-230 (277)
125 3h9e_O Glyceraldehyde-3-phosph 95.7 0.22 7.6E-06 49.4 15.2 33 206-238 7-39 (346)
126 2iz1_A 6-phosphogluconate dehy 95.7 0.013 4.3E-07 60.5 6.5 172 207-395 6-222 (474)
127 3ezy_A Dehydrogenase; structur 95.7 0.0076 2.6E-07 58.9 4.6 108 207-333 3-121 (344)
128 3euw_A MYO-inositol dehydrogen 95.7 0.0094 3.2E-07 58.1 5.2 106 207-332 5-121 (344)
129 3kb6_A D-lactate dehydrogenase 95.7 0.034 1.2E-06 54.8 9.2 106 202-329 137-250 (334)
130 1obf_O Glyceraldehyde 3-phosph 95.7 0.1 3.5E-06 51.6 12.6 32 207-238 2-37 (335)
131 2cvz_A Dehydrogenase, 3-hydrox 95.7 0.021 7.2E-07 53.8 7.4 164 207-393 2-198 (289)
132 3cky_A 2-hydroxymethyl glutara 95.6 0.025 8.7E-07 53.7 7.9 105 207-331 5-120 (301)
133 3t4e_A Quinate/shikimate dehyd 95.6 0.12 4.2E-06 50.4 12.5 133 185-331 131-277 (312)
134 3b1f_A Putative prephenate deh 95.5 0.024 8.2E-07 53.7 7.2 110 206-333 6-125 (290)
135 3nv9_A Malic enzyme; rossmann 95.5 0.011 3.7E-07 60.8 5.0 169 118-313 149-329 (487)
136 3phh_A Shikimate dehydrogenase 95.5 0.069 2.4E-06 51.2 10.4 118 185-332 105-229 (269)
137 2pgd_A 6-phosphogluconate dehy 95.5 0.02 6.7E-07 59.1 7.0 174 207-396 3-220 (482)
138 4hkt_A Inositol 2-dehydrogenas 95.5 0.017 5.9E-07 55.9 6.2 106 207-333 4-120 (331)
139 4dio_A NAD(P) transhydrogenase 95.5 0.049 1.7E-06 55.2 9.6 36 204-240 188-223 (405)
140 1yqg_A Pyrroline-5-carboxylate 95.4 0.057 1.9E-06 50.2 9.4 97 207-324 1-101 (263)
141 2x5j_O E4PDH, D-erythrose-4-ph 95.4 0.15 5E-06 50.5 12.7 32 207-238 3-38 (339)
142 3pid_A UDP-glucose 6-dehydroge 95.4 0.21 7.2E-06 51.0 14.2 183 199-397 29-270 (432)
143 3cmc_O GAPDH, glyceraldehyde-3 95.3 0.13 4.3E-06 50.8 11.9 32 207-238 2-34 (334)
144 3ic5_A Putative saccharopine d 95.3 0.021 7.3E-07 45.7 5.2 34 205-239 4-38 (118)
145 2p4q_A 6-phosphogluconate dehy 95.3 0.027 9.1E-07 58.5 7.3 172 207-395 11-226 (497)
146 1omo_A Alanine dehydrogenase; 95.3 0.052 1.8E-06 53.0 9.0 113 204-331 123-238 (322)
147 2ejw_A HDH, homoserine dehydro 95.2 0.018 6.1E-07 56.9 5.4 81 207-308 4-96 (332)
148 3db2_A Putative NADPH-dependen 95.2 0.021 7.2E-07 55.9 6.0 107 206-332 5-122 (354)
149 1vpd_A Tartronate semialdehyde 95.2 0.049 1.7E-06 51.6 8.3 168 207-394 6-209 (299)
150 1p9l_A Dihydrodipicolinate red 95.2 0.056 1.9E-06 51.1 8.5 81 207-322 1-86 (245)
151 2ahr_A Putative pyrroline carb 95.1 0.042 1.4E-06 51.1 7.3 104 207-330 4-108 (259)
152 3cea_A MYO-inositol 2-dehydrog 95.1 0.053 1.8E-06 52.6 8.2 108 205-332 7-128 (346)
153 3e9m_A Oxidoreductase, GFO/IDH 95.1 0.042 1.4E-06 53.4 7.4 110 205-333 4-124 (330)
154 3rc1_A Sugar 3-ketoreductase; 95.0 0.025 8.7E-07 55.5 5.8 110 204-333 25-146 (350)
155 3q2i_A Dehydrogenase; rossmann 95.0 0.019 6.6E-07 56.2 4.9 107 205-331 12-130 (354)
156 1ydw_A AX110P-like protein; st 95.0 0.025 8.5E-07 55.6 5.6 108 207-331 7-126 (362)
157 3tum_A Shikimate dehydrogenase 94.9 0.34 1.2E-05 46.2 13.2 128 186-331 109-245 (269)
158 3qsg_A NAD-binding phosphogluc 94.9 0.053 1.8E-06 52.4 7.6 108 206-332 24-142 (312)
159 2g1u_A Hypothetical protein TM 94.9 0.034 1.2E-06 47.8 5.6 37 201-238 14-50 (155)
160 1dih_A Dihydrodipicolinate red 94.8 0.018 6E-07 55.3 4.0 106 205-324 4-115 (273)
161 3tri_A Pyrroline-5-carboxylate 94.8 0.47 1.6E-05 45.0 14.0 112 205-336 2-125 (280)
162 1x7d_A Ornithine cyclodeaminas 94.8 0.077 2.6E-06 52.6 8.6 115 204-334 127-249 (350)
163 3u3x_A Oxidoreductase; structu 94.7 0.031 1.1E-06 55.1 5.6 109 205-332 25-144 (361)
164 1j5p_A Aspartate dehydrogenase 94.7 0.049 1.7E-06 51.8 6.7 72 205-304 11-83 (253)
165 1ff9_A Saccharopine reductase; 94.7 0.028 9.7E-07 57.5 5.4 117 205-336 2-125 (450)
166 3bio_A Oxidoreductase, GFO/IDH 94.7 0.063 2.2E-06 51.8 7.5 102 205-331 8-121 (304)
167 3e5r_O PP38, glyceraldehyde-3- 94.7 0.33 1.1E-05 47.8 12.8 32 207-238 4-36 (337)
168 3gg2_A Sugar dehydrogenase, UD 94.6 0.74 2.5E-05 47.0 15.7 32 207-239 3-34 (450)
169 4had_A Probable oxidoreductase 94.6 0.042 1.4E-06 53.5 6.1 87 207-309 24-116 (350)
170 1u8f_O GAPDH, glyceraldehyde-3 94.6 0.33 1.1E-05 47.8 12.5 32 207-238 4-36 (335)
171 3l4b_C TRKA K+ channel protien 94.5 0.033 1.1E-06 50.6 4.8 105 207-329 1-114 (218)
172 3ojo_A CAP5O; rossmann fold, c 94.5 2 6.8E-05 43.7 18.5 35 204-239 9-43 (431)
173 2czc_A Glyceraldehyde-3-phosph 94.5 0.023 8E-07 55.8 4.0 33 207-239 3-36 (334)
174 3c1a_A Putative oxidoreductase 94.4 0.012 4.1E-07 56.7 1.7 103 207-331 11-124 (315)
175 1tlt_A Putative oxidoreductase 94.4 0.025 8.5E-07 54.5 4.0 109 205-332 4-121 (319)
176 2ep7_A GAPDH, glyceraldehyde-3 94.4 0.17 5.7E-06 50.2 9.9 32 207-238 3-35 (342)
177 3dfz_A SIRC, precorrin-2 dehyd 94.4 0.045 1.5E-06 51.0 5.5 116 202-343 27-142 (223)
178 1xea_A Oxidoreductase, GFO/IDH 94.4 0.069 2.4E-06 51.5 7.0 105 207-331 3-118 (323)
179 3kux_A Putative oxidoreductase 94.4 0.073 2.5E-06 52.0 7.2 103 206-331 7-122 (352)
180 2gf2_A Hibadh, 3-hydroxyisobut 94.3 0.095 3.3E-06 49.5 7.8 166 207-395 1-205 (296)
181 4f3y_A DHPR, dihydrodipicolina 94.3 0.052 1.8E-06 52.1 5.9 114 205-334 6-130 (272)
182 3gt0_A Pyrroline-5-carboxylate 94.3 0.11 3.8E-06 48.1 8.0 110 207-336 3-124 (247)
183 2p2s_A Putative oxidoreductase 94.3 0.037 1.3E-06 53.7 4.8 108 205-331 3-121 (336)
184 1h6d_A Precursor form of gluco 94.3 0.066 2.3E-06 54.3 6.9 112 204-331 81-205 (433)
185 1dlj_A UDP-glucose dehydrogena 94.2 0.13 4.3E-06 51.8 8.8 116 207-335 1-143 (402)
186 3e18_A Oxidoreductase; dehydro 94.2 0.059 2E-06 53.1 6.3 106 205-331 4-120 (359)
187 4huj_A Uncharacterized protein 94.2 0.058 2E-06 49.4 5.8 91 206-314 23-116 (220)
188 3ohs_X Trans-1,2-dihydrobenzen 94.2 0.045 1.5E-06 53.1 5.3 107 207-332 3-122 (334)
189 1gad_O D-glyceraldehyde-3-phos 94.2 0.44 1.5E-05 46.9 12.4 33 207-239 2-35 (330)
190 2z2v_A Hypothetical protein PH 94.1 0.066 2.2E-06 53.3 6.2 119 202-335 12-133 (365)
191 3mz0_A Inositol 2-dehydrogenas 94.0 0.093 3.2E-06 51.0 7.1 108 207-330 3-120 (344)
192 2rcy_A Pyrroline carboxylate r 94.0 0.099 3.4E-06 48.5 6.9 105 205-336 3-118 (262)
193 2yyy_A Glyceraldehyde-3-phosph 93.9 0.076 2.6E-06 52.6 6.4 32 207-238 3-35 (343)
194 2raf_A Putative dinucleotide-b 93.9 0.1 3.4E-06 47.5 6.8 37 202-239 15-51 (209)
195 3g79_A NDP-N-acetyl-D-galactos 93.9 2 6.8E-05 44.3 17.2 34 206-240 18-53 (478)
196 1z82_A Glycerol-3-phosphate de 93.9 0.36 1.2E-05 46.7 11.1 94 206-314 14-114 (335)
197 2hmt_A YUAA protein; RCK, KTN, 93.8 0.045 1.6E-06 45.3 3.9 34 204-238 4-37 (144)
198 3ggo_A Prephenate dehydrogenas 93.8 0.2 6.7E-06 48.6 9.0 93 204-313 31-130 (314)
199 3pym_A GAPDH 3, glyceraldehyde 93.8 1.3 4.5E-05 43.6 14.9 32 207-238 2-34 (332)
200 3e82_A Putative oxidoreductase 93.8 0.089 3.1E-06 51.8 6.6 103 206-331 7-122 (364)
201 1yb4_A Tartronic semialdehyde 93.8 0.041 1.4E-06 52.0 4.0 105 207-331 4-118 (295)
202 3m2t_A Probable dehydrogenase; 93.8 0.032 1.1E-06 55.0 3.3 107 205-331 4-123 (359)
203 2ew2_A 2-dehydropantoate 2-red 93.7 0.14 4.8E-06 48.3 7.7 108 207-326 4-124 (316)
204 2uyy_A N-PAC protein; long-cha 93.7 0.11 3.6E-06 49.9 6.9 105 207-331 31-146 (316)
205 1npy_A Hypothetical shikimate 93.7 0.83 2.8E-05 43.4 12.9 125 184-332 102-234 (271)
206 3doc_A Glyceraldehyde 3-phosph 93.6 0.73 2.5E-05 45.5 12.6 32 207-238 3-37 (335)
207 1lu9_A Methylene tetrahydromet 93.6 0.15 5.1E-06 48.5 7.5 52 184-239 100-152 (287)
208 2vns_A Metalloreductase steap3 93.5 0.14 4.6E-06 46.7 6.8 89 205-314 27-118 (215)
209 2o3j_A UDP-glucose 6-dehydroge 93.5 2 6.9E-05 44.0 16.4 32 207-239 10-43 (481)
210 3gdo_A Uncharacterized oxidore 93.5 0.076 2.6E-06 52.2 5.4 104 205-331 4-120 (358)
211 2b4r_O Glyceraldehyde-3-phosph 93.4 0.69 2.4E-05 45.8 12.2 35 204-238 9-44 (345)
212 1id1_A Putative potassium chan 93.4 0.085 2.9E-06 45.0 5.1 33 205-238 2-34 (153)
213 1l7d_A Nicotinamide nucleotide 93.4 0.12 4.1E-06 51.5 6.8 36 203-239 169-204 (384)
214 2axq_A Saccharopine dehydrogen 93.4 0.067 2.3E-06 55.1 5.0 120 200-337 17-146 (467)
215 1bg6_A N-(1-D-carboxylethyl)-L 93.4 0.31 1E-05 47.1 9.5 108 207-327 5-126 (359)
216 3c24_A Putative oxidoreductase 93.3 0.26 8.9E-06 46.5 8.7 87 207-314 12-104 (286)
217 1f06_A MESO-diaminopimelate D- 93.3 0.089 3E-06 51.2 5.5 83 206-311 3-90 (320)
218 3ijp_A DHPR, dihydrodipicolina 93.3 0.023 8E-07 55.1 1.3 114 206-334 21-145 (288)
219 1b7g_O Protein (glyceraldehyde 93.3 0.082 2.8E-06 52.2 5.3 33 207-239 2-35 (340)
220 3ec7_A Putative dehydrogenase; 93.2 0.12 4E-06 50.9 6.3 108 204-330 21-141 (357)
221 3upl_A Oxidoreductase; rossman 93.2 0.05 1.7E-06 55.9 3.7 133 205-350 22-180 (446)
222 3mtj_A Homoserine dehydrogenas 93.2 0.13 4.5E-06 52.7 6.8 159 204-386 8-194 (444)
223 3lvf_P GAPDH 1, glyceraldehyde 93.2 1.2 4.1E-05 44.0 13.4 32 207-238 5-37 (338)
224 2ixa_A Alpha-N-acetylgalactosa 93.2 0.098 3.4E-06 53.0 5.8 110 204-331 18-146 (444)
225 2f1k_A Prephenate dehydrogenas 93.1 0.28 9.4E-06 45.9 8.5 88 207-314 1-94 (279)
226 4dib_A GAPDH, glyceraldehyde 3 93.1 1.1 3.6E-05 44.5 12.8 32 207-238 5-37 (345)
227 3rwb_A TPLDH, pyridoxal 4-dehy 93.0 0.15 5E-06 47.2 6.4 35 203-238 3-38 (247)
228 3u62_A Shikimate dehydrogenase 93.0 0.14 4.7E-06 48.4 6.2 116 186-333 95-221 (253)
229 2g5c_A Prephenate dehydrogenas 93.0 0.27 9.3E-06 46.1 8.2 101 207-325 2-112 (281)
230 1x13_A NAD(P) transhydrogenase 92.9 0.16 5.5E-06 51.1 7.0 36 204-240 170-205 (401)
231 1kyq_A Met8P, siroheme biosynt 92.9 0.099 3.4E-06 50.2 5.1 35 202-236 9-43 (274)
232 3p2y_A Alanine dehydrogenase/p 92.8 0.16 5.5E-06 51.0 6.7 35 204-239 182-216 (381)
233 2duw_A Putative COA-binding pr 92.7 0.23 7.7E-06 42.8 6.7 109 206-344 13-131 (145)
234 3hja_A GAPDH, glyceraldehyde-3 92.6 0.4 1.4E-05 47.7 9.1 33 206-238 21-53 (356)
235 2d59_A Hypothetical protein PH 92.6 0.54 1.8E-05 40.3 9.0 100 206-331 22-128 (144)
236 3o9z_A Lipopolysaccaride biosy 92.6 0.13 4.4E-06 49.8 5.5 107 207-331 4-127 (312)
237 1y81_A Conserved hypothetical 92.6 0.46 1.6E-05 40.6 8.4 112 204-344 12-130 (138)
238 1zh8_A Oxidoreductase; TM0312, 92.6 0.22 7.5E-06 48.5 7.2 109 204-331 16-137 (340)
239 3oa2_A WBPB; oxidoreductase, s 92.6 0.13 4.3E-06 49.9 5.5 107 207-331 4-128 (318)
240 2eez_A Alanine dehydrogenase; 92.5 0.2 6.7E-06 49.6 6.8 35 204-239 164-198 (369)
241 3evn_A Oxidoreductase, GFO/IDH 92.4 0.12 4.1E-06 50.0 5.1 107 205-331 4-122 (329)
242 2vhw_A Alanine dehydrogenase; 92.3 0.14 4.7E-06 51.1 5.4 36 203-239 165-200 (377)
243 4e6p_A Probable sorbitol dehyd 92.3 0.13 4.4E-06 47.7 4.9 35 203-238 5-40 (259)
244 2q3e_A UDP-glucose 6-dehydroge 92.2 3 0.0001 42.4 15.5 32 207-239 6-39 (467)
245 4fb5_A Probable oxidoreductase 92.2 0.26 8.8E-06 48.0 7.3 37 203-239 22-66 (393)
246 1i36_A Conserved hypothetical 92.2 0.22 7.6E-06 46.2 6.5 101 207-327 1-106 (264)
247 4hp8_A 2-deoxy-D-gluconate 3-d 92.2 0.26 8.7E-06 46.6 6.9 36 203-239 6-42 (247)
248 3f4l_A Putative oxidoreductase 92.2 0.067 2.3E-06 52.1 3.0 104 207-331 3-120 (345)
249 3abi_A Putative uncharacterize 92.2 0.29 9.9E-06 48.1 7.6 112 206-335 16-133 (365)
250 4h3v_A Oxidoreductase domain p 92.1 0.19 6.6E-06 48.9 6.1 91 204-310 4-106 (390)
251 2y0c_A BCEC, UDP-glucose dehyd 92.0 2.9 9.8E-05 42.9 15.1 33 206-239 8-40 (478)
252 2nu8_A Succinyl-COA ligase [AD 91.9 0.37 1.3E-05 46.2 7.8 108 205-334 6-123 (288)
253 3moi_A Probable dehydrogenase; 91.9 0.14 4.8E-06 50.8 4.9 105 207-331 3-119 (387)
254 4fs3_A Enoyl-[acyl-carrier-pro 91.7 0.21 7E-06 46.6 5.5 37 202-239 2-41 (256)
255 3btv_A Galactose/lactose metab 91.7 0.071 2.4E-06 54.1 2.5 109 205-331 19-150 (438)
256 3e8x_A Putative NAD-dependent 91.6 0.21 7.1E-06 45.2 5.4 34 203-236 18-52 (236)
257 2izz_A Pyrroline-5-carboxylate 91.6 0.55 1.9E-05 45.3 8.7 104 204-325 20-132 (322)
258 3uve_A Carveol dehydrogenase ( 91.5 0.14 5E-06 48.0 4.4 37 202-239 7-44 (286)
259 3h8v_A Ubiquitin-like modifier 91.5 0.12 4.3E-06 50.0 4.0 51 189-239 14-69 (292)
260 1zej_A HBD-9, 3-hydroxyacyl-CO 91.5 0.51 1.7E-05 45.6 8.3 73 205-293 11-85 (293)
261 3e03_A Short chain dehydrogena 91.5 0.24 8.3E-06 46.4 5.9 37 202-239 2-39 (274)
262 3i23_A Oxidoreductase, GFO/IDH 91.5 0.2 6.7E-06 48.9 5.4 105 207-331 3-120 (349)
263 3v1y_O PP38, glyceraldehyde-3- 91.5 1.6 5.6E-05 43.0 11.9 32 207-238 4-36 (337)
264 4eso_A Putative oxidoreductase 91.3 0.16 5.4E-06 47.2 4.3 35 203-238 5-40 (255)
265 3vtf_A UDP-glucose 6-dehydroge 91.3 7.6 0.00026 39.6 17.1 32 207-239 22-53 (444)
266 1mv8_A GMD, GDP-mannose 6-dehy 91.2 0.53 1.8E-05 47.5 8.4 32 207-239 1-32 (436)
267 4gqa_A NAD binding oxidoreduct 91.2 0.26 8.9E-06 49.1 6.0 33 207-239 27-68 (412)
268 1lc0_A Biliverdin reductase A; 91.1 0.15 5.2E-06 48.7 4.2 101 205-331 6-120 (294)
269 2aef_A Calcium-gated potassium 91.1 0.15 5E-06 46.7 3.8 103 206-329 9-120 (234)
270 3zv4_A CIS-2,3-dihydrobiphenyl 91.0 0.23 7.8E-06 46.8 5.2 35 203-238 2-37 (281)
271 3uf0_A Short-chain dehydrogena 90.9 0.24 8E-06 46.6 5.2 35 202-236 27-62 (273)
272 3dty_A Oxidoreductase, GFO/IDH 90.9 0.21 7.3E-06 49.7 5.1 109 204-331 10-140 (398)
273 1xyg_A Putative N-acetyl-gamma 90.7 0.44 1.5E-05 47.2 7.2 73 205-289 15-90 (359)
274 1r0k_A 1-deoxy-D-xylulose 5-ph 90.6 0.32 1.1E-05 48.9 6.1 114 207-333 5-149 (388)
275 3grp_A 3-oxoacyl-(acyl carrier 90.6 0.19 6.5E-06 47.1 4.2 35 203-238 24-59 (266)
276 4b4u_A Bifunctional protein fo 90.5 0.8 2.7E-05 44.6 8.6 54 181-239 158-212 (303)
277 3fhl_A Putative oxidoreductase 90.5 0.45 1.5E-05 46.6 7.0 107 205-331 4-120 (362)
278 3kkj_A Amine oxidase, flavin-c 90.4 0.26 8.7E-06 42.8 4.6 31 208-239 4-34 (336)
279 2i76_A Hypothetical protein; N 90.4 0.18 6.1E-06 47.6 3.8 85 207-311 3-89 (276)
280 1iuk_A Hypothetical protein TT 90.3 1.2 4E-05 38.0 8.6 30 206-235 13-46 (140)
281 3keo_A Redox-sensing transcrip 90.2 0.099 3.4E-06 48.4 1.8 54 186-240 65-120 (212)
282 3i83_A 2-dehydropantoate 2-red 90.2 1.3 4.4E-05 42.5 9.8 111 207-331 3-126 (320)
283 3gpi_A NAD-dependent epimerase 90.2 0.28 9.5E-06 45.7 4.9 34 205-238 2-35 (286)
284 1np3_A Ketol-acid reductoisome 90.1 0.18 6.2E-06 49.3 3.7 35 204-239 14-48 (338)
285 3v5n_A Oxidoreductase; structu 89.9 0.4 1.4E-05 48.1 6.1 109 204-331 35-165 (417)
286 2dpo_A L-gulonate 3-dehydrogen 89.8 0.59 2E-05 45.5 7.0 33 206-239 6-38 (319)
287 4imr_A 3-oxoacyl-(acyl-carrier 89.7 0.47 1.6E-05 44.6 6.2 35 203-238 30-65 (275)
288 3lk7_A UDP-N-acetylmuramoylala 89.7 0.3 1E-05 49.6 5.1 36 203-239 6-41 (451)
289 3sc4_A Short chain dehydrogena 89.7 0.37 1.2E-05 45.5 5.4 36 203-239 6-42 (285)
290 2vt3_A REX, redox-sensing tran 89.6 0.18 6.3E-06 46.6 3.0 34 206-239 85-120 (215)
291 2nvw_A Galactose/lactose metab 89.5 0.21 7.2E-06 51.4 3.8 109 205-331 38-170 (479)
292 1yqd_A Sinapyl alcohol dehydro 89.5 0.93 3.2E-05 44.4 8.3 42 196-237 178-219 (366)
293 3k96_A Glycerol-3-phosphate de 89.5 0.64 2.2E-05 45.9 7.1 97 205-314 28-136 (356)
294 3hdj_A Probable ornithine cycl 89.4 1.4 4.9E-05 42.7 9.5 146 169-334 88-237 (313)
295 2qyt_A 2-dehydropantoate 2-red 89.4 0.27 9.3E-06 46.6 4.2 96 207-316 9-122 (317)
296 3k6j_A Protein F01G10.3, confi 89.3 0.45 1.5E-05 48.9 6.1 32 207-239 55-86 (460)
297 4e12_A Diketoreductase; oxidor 89.2 0.41 1.4E-05 45.3 5.3 32 207-239 5-36 (283)
298 3kvo_A Hydroxysteroid dehydrog 89.2 0.45 1.5E-05 46.6 5.8 35 203-238 42-77 (346)
299 1jw9_B Molybdopterin biosynthe 89.1 0.19 6.4E-06 47.2 2.8 36 204-239 29-64 (249)
300 2ozp_A N-acetyl-gamma-glutamyl 89.0 0.51 1.7E-05 46.5 6.0 32 207-238 5-38 (345)
301 4dyv_A Short-chain dehydrogena 89.0 0.26 9E-06 46.3 3.7 35 203-238 25-60 (272)
302 3mog_A Probable 3-hydroxybutyr 89.0 0.82 2.8E-05 47.1 7.7 33 206-239 5-37 (483)
303 1evy_A Glycerol-3-phosphate de 88.8 0.5 1.7E-05 46.1 5.8 31 208-239 17-47 (366)
304 4fgs_A Probable dehydrogenase 88.8 0.52 1.8E-05 45.0 5.7 41 198-239 21-62 (273)
305 4iin_A 3-ketoacyl-acyl carrier 88.7 0.51 1.8E-05 43.9 5.5 53 185-237 7-61 (271)
306 1pjq_A CYSG, siroheme synthase 88.6 0.45 1.6E-05 48.6 5.5 35 202-236 8-42 (457)
307 1pjc_A Protein (L-alanine dehy 88.4 0.46 1.6E-05 46.8 5.3 35 204-239 165-199 (361)
308 4gkb_A 3-oxoacyl-[acyl-carrier 88.4 0.61 2.1E-05 44.0 5.9 37 201-238 2-39 (258)
309 4g65_A TRK system potassium up 88.4 0.21 7.3E-06 51.1 2.9 33 206-239 3-35 (461)
310 1hdo_A Biliverdin IX beta redu 88.3 0.65 2.2E-05 40.3 5.7 33 205-237 2-35 (206)
311 4g81_D Putative hexonate dehyd 88.2 0.43 1.5E-05 45.1 4.6 36 203-239 6-42 (255)
312 3o38_A Short chain dehydrogena 88.0 0.45 1.5E-05 44.0 4.6 35 203-238 19-55 (266)
313 4h15_A Short chain alcohol deh 87.9 0.5 1.7E-05 44.6 4.9 36 203-239 8-44 (261)
314 2cf5_A Atccad5, CAD, cinnamyl 87.9 1.1 3.9E-05 43.5 7.7 41 197-237 172-212 (357)
315 1f0y_A HCDH, L-3-hydroxyacyl-C 87.9 0.57 1.9E-05 44.6 5.4 32 207-239 16-47 (302)
316 1zud_1 Adenylyltransferase THI 87.8 0.34 1.2E-05 45.4 3.7 36 204-239 26-61 (251)
317 3svt_A Short-chain type dehydr 87.7 0.66 2.3E-05 43.4 5.7 36 202-238 7-43 (281)
318 4fn4_A Short chain dehydrogena 87.6 0.55 1.9E-05 44.3 5.0 36 203-239 4-40 (254)
319 3fr7_A Putative ketol-acid red 87.6 0.5 1.7E-05 49.2 5.0 34 204-238 51-91 (525)
320 1cyd_A Carbonyl reductase; sho 87.5 0.8 2.8E-05 41.3 5.9 34 202-235 3-37 (244)
321 3edm_A Short chain dehydrogena 87.5 0.86 2.9E-05 42.2 6.2 37 203-239 5-42 (259)
322 3qiv_A Short-chain dehydrogena 87.5 0.75 2.6E-05 42.0 5.8 36 202-238 5-41 (253)
323 3ff4_A Uncharacterized protein 87.4 1.8 6E-05 36.3 7.5 100 207-332 5-110 (122)
324 1ks9_A KPA reductase;, 2-dehyd 87.4 0.64 2.2E-05 43.2 5.3 32 207-239 1-32 (291)
325 4hb9_A Similarities with proba 87.4 0.61 2.1E-05 45.0 5.3 32 207-239 2-33 (412)
326 3h7a_A Short chain dehydrogena 87.3 0.7 2.4E-05 42.7 5.4 36 202-238 3-39 (252)
327 4ina_A Saccharopine dehydrogen 87.1 0.85 2.9E-05 45.7 6.4 32 207-239 2-36 (405)
328 2hq1_A Glucose/ribitol dehydro 87.0 0.72 2.5E-05 41.7 5.3 36 203-238 2-38 (247)
329 2pzm_A Putative nucleotide sug 87.0 0.69 2.4E-05 44.0 5.4 34 203-236 17-51 (330)
330 2z1m_A GDP-D-mannose dehydrata 87.0 0.62 2.1E-05 44.0 5.1 34 204-238 1-35 (345)
331 3hwr_A 2-dehydropantoate 2-red 86.9 1.9 6.4E-05 41.4 8.5 99 203-316 16-125 (318)
332 3ai3_A NADPH-sorbose reductase 86.8 0.95 3.3E-05 41.7 6.1 36 202-238 3-39 (263)
333 3two_A Mannitol dehydrogenase; 86.7 1.6 5.3E-05 42.3 7.9 33 204-236 175-207 (348)
334 3ius_A Uncharacterized conserv 86.7 0.62 2.1E-05 43.1 4.8 32 206-237 5-36 (286)
335 3rd5_A Mypaa.01249.C; ssgcid, 86.7 0.81 2.8E-05 43.0 5.7 36 202-238 12-48 (291)
336 3pxx_A Carveol dehydrogenase; 86.7 0.83 2.8E-05 42.5 5.7 36 203-239 7-43 (287)
337 3s55_A Putative short-chain de 86.6 0.84 2.9E-05 42.6 5.7 36 203-239 7-43 (281)
338 1y1p_A ARII, aldehyde reductas 86.6 0.83 2.8E-05 43.1 5.7 34 204-237 9-43 (342)
339 3tzq_B Short-chain type dehydr 86.6 0.89 3E-05 42.4 5.8 37 202-239 7-44 (271)
340 4b4o_A Epimerase family protei 86.5 0.75 2.6E-05 43.0 5.3 31 207-237 1-32 (298)
341 3ijr_A Oxidoreductase, short c 86.4 0.83 2.8E-05 43.2 5.6 36 202-238 43-79 (291)
342 3f1l_A Uncharacterized oxidore 86.3 0.84 2.9E-05 42.0 5.5 35 203-238 9-44 (252)
343 3tpc_A Short chain alcohol deh 86.3 0.89 3E-05 41.8 5.6 36 202-238 3-39 (257)
344 2wsb_A Galactitol dehydrogenas 86.3 0.98 3.4E-05 41.0 5.8 35 203-238 8-43 (254)
345 3awd_A GOX2181, putative polyo 86.3 0.98 3.3E-05 41.2 5.8 35 203-238 10-45 (260)
346 4a8p_A Putrescine carbamoyltra 86.1 10 0.00035 37.5 13.5 299 74-410 10-340 (355)
347 1pqw_A Polyketide synthase; ro 86.1 1.4 4.9E-05 38.6 6.6 32 204-235 37-69 (198)
348 3r1i_A Short-chain type dehydr 86.1 0.89 3E-05 42.7 5.6 35 203-238 29-64 (276)
349 2pd6_A Estradiol 17-beta-dehyd 86.1 1.1 3.7E-05 40.9 6.1 34 202-235 3-37 (264)
350 2pnf_A 3-oxoacyl-[acyl-carrier 86.1 0.81 2.8E-05 41.3 5.1 36 202-238 3-39 (248)
351 3lf2_A Short chain oxidoreduct 86.0 1 3.4E-05 41.8 5.8 36 202-238 4-40 (265)
352 1u7z_A Coenzyme A biosynthesis 86.0 1 3.5E-05 42.0 5.8 35 203-237 5-56 (226)
353 3h2s_A Putative NADH-flavin re 86.0 0.89 3.1E-05 40.3 5.3 30 207-236 1-31 (224)
354 1hdc_A 3-alpha, 20 beta-hydrox 86.0 0.99 3.4E-05 41.5 5.7 35 203-238 2-37 (254)
355 2dt5_A AT-rich DNA-binding pro 86.0 0.63 2.2E-05 42.8 4.3 39 199-239 74-114 (211)
356 3ucx_A Short chain dehydrogena 85.9 0.96 3.3E-05 41.9 5.7 36 202-238 7-43 (264)
357 3ak4_A NADH-dependent quinucli 85.9 0.98 3.3E-05 41.6 5.7 35 203-238 9-44 (263)
358 1ys4_A Aspartate-semialdehyde 85.9 1.7 5.9E-05 42.7 7.7 31 207-237 9-41 (354)
359 3d3w_A L-xylulose reductase; u 85.8 1.1 3.7E-05 40.6 5.8 33 203-235 4-37 (244)
360 1o5i_A 3-oxoacyl-(acyl carrier 85.8 1.1 3.6E-05 41.3 5.8 36 202-238 15-51 (249)
361 1zem_A Xylitol dehydrogenase; 85.8 1 3.5E-05 41.6 5.8 36 202-238 3-39 (262)
362 4dqx_A Probable oxidoreductase 85.7 0.99 3.4E-05 42.3 5.7 36 202-238 23-59 (277)
363 3i1j_A Oxidoreductase, short c 85.7 0.76 2.6E-05 41.7 4.8 35 203-238 11-46 (247)
364 1jay_A Coenzyme F420H2:NADP+ o 85.7 0.78 2.7E-05 40.8 4.7 93 207-313 1-99 (212)
365 2h7i_A Enoyl-[acyl-carrier-pro 85.7 0.76 2.6E-05 42.7 4.8 36 203-239 4-42 (269)
366 3ew7_A LMO0794 protein; Q8Y8U8 85.7 0.95 3.3E-05 39.8 5.3 31 207-237 1-32 (221)
367 2x5o_A UDP-N-acetylmuramoylala 85.7 0.44 1.5E-05 48.1 3.4 37 203-240 2-38 (439)
368 3oig_A Enoyl-[acyl-carrier-pro 85.6 1.1 3.9E-05 41.2 6.0 36 202-238 3-41 (266)
369 1zmo_A Halohydrin dehalogenase 85.6 1.6 5.5E-05 39.8 6.9 30 206-235 1-31 (244)
370 4id9_A Short-chain dehydrogena 85.6 0.66 2.3E-05 44.2 4.5 35 203-237 16-51 (347)
371 3n74_A 3-ketoacyl-(acyl-carrie 85.6 1.1 3.7E-05 41.1 5.8 36 202-238 5-41 (261)
372 3sx2_A Putative 3-ketoacyl-(ac 85.6 1 3.5E-05 41.9 5.6 37 202-239 9-46 (278)
373 1nvm_B Acetaldehyde dehydrogen 85.5 0.79 2.7E-05 44.5 5.0 89 206-310 4-104 (312)
374 3k31_A Enoyl-(acyl-carrier-pro 85.5 0.95 3.3E-05 42.9 5.5 37 202-239 26-65 (296)
375 3t4x_A Oxidoreductase, short c 85.5 0.81 2.8E-05 42.5 4.9 37 201-238 5-42 (267)
376 2yjz_A Metalloreductase steap4 85.7 0.16 5.5E-06 46.0 0.0 35 204-239 17-51 (201)
377 3imf_A Short chain dehydrogena 85.4 0.76 2.6E-05 42.4 4.6 35 203-238 3-38 (257)
378 3dfu_A Uncharacterized protein 85.4 0.36 1.2E-05 45.2 2.3 32 204-235 4-35 (232)
379 3vps_A TUNA, NAD-dependent epi 85.4 0.75 2.6E-05 43.0 4.6 33 204-236 5-38 (321)
380 2v6b_A L-LDH, L-lactate dehydr 85.3 2.7 9.2E-05 40.3 8.6 32 207-239 1-34 (304)
381 2q2v_A Beta-D-hydroxybutyrate 85.2 0.91 3.1E-05 41.7 5.1 36 203-239 1-37 (255)
382 3enk_A UDP-glucose 4-epimerase 85.2 3.8 0.00013 38.6 9.6 33 205-238 4-37 (341)
383 3ppi_A 3-hydroxyacyl-COA dehyd 85.2 0.77 2.6E-05 42.8 4.6 35 203-238 27-62 (281)
384 2o7s_A DHQ-SDH PR, bifunctiona 85.2 0.68 2.3E-05 48.0 4.6 55 184-239 333-396 (523)
385 3p19_A BFPVVD8, putative blue 85.2 0.87 3E-05 42.5 4.9 37 201-238 11-48 (266)
386 3op4_A 3-oxoacyl-[acyl-carrier 85.1 0.88 3E-05 41.8 4.9 35 203-238 6-41 (248)
387 1piw_A Hypothetical zinc-type 85.1 1.9 6.5E-05 41.9 7.6 32 205-236 179-210 (360)
388 3vku_A L-LDH, L-lactate dehydr 85.1 2.6 8.9E-05 41.2 8.5 34 204-238 7-42 (326)
389 3pk0_A Short-chain dehydrogena 85.0 0.82 2.8E-05 42.4 4.7 35 203-238 7-42 (262)
390 3nyw_A Putative oxidoreductase 85.0 0.9 3.1E-05 41.8 4.9 36 202-238 3-39 (250)
391 2z1n_A Dehydrogenase; reductas 85.0 1.3 4.5E-05 40.7 6.1 35 203-238 4-39 (260)
392 3goh_A Alcohol dehydrogenase, 85.0 1.5 5E-05 41.7 6.6 33 204-236 141-173 (315)
393 1lnq_A MTHK channels, potassiu 85.0 0.68 2.3E-05 44.7 4.3 103 206-329 115-226 (336)
394 4b79_A PA4098, probable short- 85.0 1.1 3.6E-05 42.1 5.4 35 204-239 9-44 (242)
395 3ioy_A Short-chain dehydrogena 84.9 1.1 3.6E-05 43.1 5.6 35 203-238 5-40 (319)
396 4fc7_A Peroxisomal 2,4-dienoyl 84.9 1 3.4E-05 42.1 5.3 35 203-238 24-59 (277)
397 2cdc_A Glucose dehydrogenase g 84.9 0.75 2.6E-05 44.9 4.5 31 206-236 181-211 (366)
398 3lyl_A 3-oxoacyl-(acyl-carrier 84.8 1 3.4E-05 41.0 5.1 34 203-236 2-36 (247)
399 2o23_A HADH2 protein; HSD17B10 84.8 1.3 4.3E-05 40.5 5.8 36 202-238 8-44 (265)
400 4ibo_A Gluconate dehydrogenase 84.8 0.83 2.8E-05 42.8 4.6 36 202-238 22-58 (271)
401 2ew8_A (S)-1-phenylethanol deh 84.8 1.3 4.5E-05 40.5 5.9 35 203-238 4-39 (249)
402 1d7o_A Enoyl-[acyl-carrier pro 84.8 1.2 4.2E-05 41.8 5.9 34 202-235 4-40 (297)
403 3t7c_A Carveol dehydrogenase; 84.8 1.2 4.2E-05 42.1 5.9 37 202-239 24-61 (299)
404 4a2c_A Galactitol-1-phosphate 84.8 2.2 7.4E-05 40.9 7.7 36 204-239 159-194 (346)
405 3ktd_A Prephenate dehydrogenas 84.7 0.82 2.8E-05 45.0 4.7 33 206-239 8-40 (341)
406 2b4q_A Rhamnolipids biosynthes 84.7 1.3 4.4E-05 41.5 5.9 35 203-238 26-61 (276)
407 1nff_A Putative oxidoreductase 84.7 1.4 4.7E-05 40.8 6.1 35 203-238 4-39 (260)
408 3rkr_A Short chain oxidoreduct 84.7 0.89 3E-05 42.0 4.8 35 203-238 26-61 (262)
409 1hxh_A 3BETA/17BETA-hydroxyste 84.7 0.95 3.2E-05 41.6 4.9 35 203-238 3-38 (253)
410 1yj8_A Glycerol-3-phosphate de 84.7 0.94 3.2E-05 44.5 5.1 32 207-239 22-60 (375)
411 1yde_A Retinal dehydrogenase/r 84.6 1.3 4.5E-05 41.2 5.9 36 202-238 5-41 (270)
412 4egf_A L-xylulose reductase; s 84.6 0.88 3E-05 42.3 4.7 35 203-238 17-52 (266)
413 3uxy_A Short-chain dehydrogena 84.6 0.86 2.9E-05 42.5 4.6 36 203-239 25-61 (266)
414 3gaf_A 7-alpha-hydroxysteroid 84.5 0.85 2.9E-05 42.1 4.6 36 202-238 8-44 (256)
415 3tjr_A Short chain dehydrogena 84.5 1.2 4E-05 42.3 5.6 35 203-238 28-63 (301)
416 3r3s_A Oxidoreductase; structu 84.5 1.2 4E-05 42.1 5.6 35 203-238 46-81 (294)
417 1vl8_A Gluconate 5-dehydrogena 84.5 1.4 4.7E-05 41.0 6.0 36 202-238 17-53 (267)
418 2ae2_A Protein (tropinone redu 84.5 1.3 4.5E-05 40.7 5.8 35 203-238 6-41 (260)
419 2h6e_A ADH-4, D-arabinose 1-de 84.4 1.8 6.1E-05 41.7 7.0 31 205-235 170-202 (344)
420 3nkl_A UDP-D-quinovosamine 4-d 84.4 1.2 4.1E-05 37.0 5.0 35 205-239 3-38 (141)
421 3rih_A Short chain dehydrogena 84.4 0.9 3.1E-05 43.2 4.8 37 202-239 37-74 (293)
422 3f9i_A 3-oxoacyl-[acyl-carrier 84.3 0.98 3.4E-05 41.1 4.8 36 202-238 10-46 (249)
423 2fwm_X 2,3-dihydro-2,3-dihydro 84.3 1.4 4.6E-05 40.4 5.8 36 203-239 4-40 (250)
424 2bgk_A Rhizome secoisolaricire 84.3 1.3 4.5E-05 40.7 5.8 35 203-238 13-48 (278)
425 3v2h_A D-beta-hydroxybutyrate 84.3 1.4 4.8E-05 41.3 6.0 36 202-238 21-57 (281)
426 3v2g_A 3-oxoacyl-[acyl-carrier 84.2 1.6 5.4E-05 40.8 6.3 36 202-237 27-63 (271)
427 3gvc_A Oxidoreductase, probabl 84.2 0.84 2.9E-05 42.9 4.4 35 203-238 26-61 (277)
428 3q2o_A Phosphoribosylaminoimid 84.2 2.9 0.0001 41.0 8.6 55 204-259 12-75 (389)
429 3rui_A Ubiquitin-like modifier 84.2 0.77 2.6E-05 45.4 4.2 36 204-239 32-67 (340)
430 1w6u_A 2,4-dienoyl-COA reducta 84.2 1.3 4.5E-05 41.4 5.8 35 203-238 23-58 (302)
431 1uuf_A YAHK, zinc-type alcohol 84.1 2.6 9E-05 41.2 8.1 32 205-236 194-225 (369)
432 1h5q_A NADP-dependent mannitol 84.0 1.1 3.7E-05 40.9 4.9 34 203-236 11-45 (265)
433 1cf2_P Protein (glyceraldehyde 83.9 0.72 2.5E-05 45.3 3.9 33 207-239 2-35 (337)
434 3s2e_A Zinc-containing alcohol 83.9 2.1 7.1E-05 41.1 7.2 33 204-236 165-197 (340)
435 3grk_A Enoyl-(acyl-carrier-pro 83.9 1.2 4.2E-05 42.1 5.4 36 203-239 28-66 (293)
436 1txg_A Glycerol-3-phosphate de 83.9 0.89 3.1E-05 43.3 4.5 108 207-326 1-125 (335)
437 1zsy_A Mitochondrial 2-enoyl t 83.8 1.8 6.2E-05 42.0 6.7 36 204-239 166-202 (357)
438 1rjw_A ADH-HT, alcohol dehydro 83.8 2.1 7.1E-05 41.3 7.1 33 205-238 164-196 (339)
439 2wyu_A Enoyl-[acyl carrier pro 83.8 1.1 3.9E-05 41.3 5.0 35 203-238 5-42 (261)
440 1iy8_A Levodione reductase; ox 83.8 1.5 5E-05 40.6 5.8 35 203-238 10-45 (267)
441 1zk4_A R-specific alcohol dehy 83.7 1.1 3.7E-05 40.7 4.8 35 203-238 3-38 (251)
442 3nrc_A Enoyl-[acyl-carrier-pro 83.7 1.1 3.8E-05 41.9 5.0 36 203-239 23-61 (280)
443 1fmc_A 7 alpha-hydroxysteroid 83.7 0.99 3.4E-05 40.9 4.5 35 203-238 8-43 (255)
444 2pd4_A Enoyl-[acyl-carrier-pro 83.7 1.2 4.2E-05 41.4 5.2 35 203-238 3-40 (275)
445 3tox_A Short chain dehydrogena 83.6 1 3.5E-05 42.4 4.7 36 203-239 5-41 (280)
446 1yb1_A 17-beta-hydroxysteroid 83.6 1.6 5.3E-05 40.6 6.0 36 202-238 27-63 (272)
447 4dry_A 3-oxoacyl-[acyl-carrier 83.6 0.84 2.9E-05 43.0 4.1 36 202-238 29-65 (281)
448 2d1y_A Hypothetical protein TT 83.6 1.5 5.1E-05 40.3 5.8 35 203-238 3-38 (256)
449 1sby_A Alcohol dehydrogenase; 83.6 1.3 4.4E-05 40.5 5.3 36 203-239 2-39 (254)
450 2pv7_A T-protein [includes: ch 83.5 0.92 3.1E-05 43.2 4.4 33 206-239 21-54 (298)
451 3vtz_A Glucose 1-dehydrogenase 83.5 1.2 4.1E-05 41.6 5.1 37 201-238 9-46 (269)
452 3l6e_A Oxidoreductase, short-c 83.4 1.3 4.4E-05 40.3 5.2 33 205-238 2-35 (235)
453 1ja9_A 4HNR, 1,3,6,8-tetrahydr 83.4 1.1 3.8E-05 41.0 4.8 36 202-237 17-53 (274)
454 3sxp_A ADP-L-glycero-D-mannohe 83.3 1.5 5.3E-05 42.1 6.0 36 202-237 6-44 (362)
455 2qq5_A DHRS1, dehydrogenase/re 83.3 1.1 3.8E-05 41.2 4.8 35 203-238 2-37 (260)
456 3ids_C GAPDH, glyceraldehyde-3 83.3 10 0.00034 37.7 11.8 32 207-238 3-39 (359)
457 2jah_A Clavulanic acid dehydro 83.3 1.6 5.4E-05 40.0 5.8 35 203-238 4-39 (247)
458 1uls_A Putative 3-oxoacyl-acyl 83.2 1.6 5.4E-05 39.9 5.8 35 203-238 2-37 (245)
459 4ew6_A D-galactose-1-dehydroge 83.2 1.1 3.8E-05 43.3 4.9 37 204-240 23-61 (330)
460 3pgx_A Carveol dehydrogenase; 83.2 1.5 5.3E-05 40.8 5.8 36 202-238 11-47 (280)
461 1ooe_A Dihydropteridine reduct 83.1 1.1 3.9E-05 40.4 4.7 34 204-238 1-35 (236)
462 3gem_A Short chain dehydrogena 83.0 0.8 2.7E-05 42.6 3.7 36 202-238 23-59 (260)
463 3afn_B Carbonyl reductase; alp 83.0 0.98 3.3E-05 41.0 4.2 34 203-236 4-38 (258)
464 3uog_A Alcohol dehydrogenase; 82.9 2.5 8.5E-05 41.2 7.4 33 204-236 188-220 (363)
465 1xg5_A ARPG836; short chain de 82.9 1.4 4.7E-05 40.9 5.3 34 204-238 30-64 (279)
466 2zat_A Dehydrogenase/reductase 82.9 1.3 4.5E-05 40.6 5.1 36 202-238 10-46 (260)
467 1yxm_A Pecra, peroxisomal tran 82.9 1.6 5.5E-05 40.9 5.8 35 203-238 15-50 (303)
468 4b7c_A Probable oxidoreductase 82.9 2.5 8.5E-05 40.4 7.3 33 204-236 148-181 (336)
469 4gx0_A TRKA domain protein; me 82.8 0.99 3.4E-05 46.8 4.7 108 199-329 341-457 (565)
470 2c29_D Dihydroflavonol 4-reduc 82.8 1.1 3.7E-05 42.5 4.6 34 204-237 3-37 (337)
471 3oml_A GH14720P, peroxisomal m 82.7 1.2 4E-05 47.1 5.2 36 202-238 15-51 (613)
472 1h2b_A Alcohol dehydrogenase; 82.7 2.6 9E-05 40.9 7.4 33 204-236 185-218 (359)
473 2bka_A CC3, TAT-interacting pr 82.7 1.1 3.8E-05 40.3 4.4 33 204-236 16-51 (242)
474 2q1w_A Putative nucleotide sug 82.7 1.4 4.9E-05 41.8 5.4 33 204-236 19-52 (333)
475 2b69_A UDP-glucuronate decarbo 82.6 1.4 5E-05 41.8 5.4 34 204-237 25-59 (343)
476 1xq6_A Unknown protein; struct 82.6 1.8 6.2E-05 38.7 5.8 33 204-236 2-37 (253)
477 2gdz_A NAD+-dependent 15-hydro 82.6 1.7 5.7E-05 40.1 5.7 34 204-238 5-39 (267)
478 1x1t_A D(-)-3-hydroxybutyrate 82.5 1.3 4.3E-05 40.8 4.8 35 204-239 2-37 (260)
479 2rhc_B Actinorhodin polyketide 82.5 1.7 5.9E-05 40.5 5.8 35 203-238 19-54 (277)
480 3oz2_A Digeranylgeranylglycero 82.5 1.1 3.8E-05 42.7 4.6 31 208-239 6-36 (397)
481 2dtx_A Glucose 1-dehydrogenase 82.4 1.4 4.8E-05 40.9 5.1 33 204-236 6-39 (264)
482 1p0f_A NADP-dependent alcohol 82.4 2.2 7.5E-05 41.6 6.8 34 204-238 190-224 (373)
483 1ae1_A Tropinone reductase-I; 82.3 1.8 6.1E-05 40.2 5.8 36 202-238 17-53 (273)
484 3dqp_A Oxidoreductase YLBE; al 82.3 1.3 4.4E-05 39.4 4.6 32 207-238 1-33 (219)
485 2uvd_A 3-oxoacyl-(acyl-carrier 82.3 1.3 4.6E-05 40.3 4.9 33 204-236 2-35 (246)
486 2ag5_A DHRS6, dehydrogenase/re 82.2 1.4 4.8E-05 40.2 4.9 35 203-238 3-38 (246)
487 3ghy_A Ketopantoate reductase 82.2 1.1 3.9E-05 43.2 4.5 32 206-238 3-34 (335)
488 2o2s_A Enoyl-acyl carrier redu 82.1 1.6 5.4E-05 41.6 5.5 34 202-235 5-41 (315)
489 3tfo_A Putative 3-oxoacyl-(acy 82.1 1.2 4.2E-05 41.5 4.6 34 204-238 2-36 (264)
490 3is3_A 17BETA-hydroxysteroid d 82.1 1.6 5.5E-05 40.5 5.4 35 202-236 14-49 (270)
491 3gvi_A Malate dehydrogenase; N 82.0 1.4 4.8E-05 43.0 5.1 35 204-239 5-40 (324)
492 1rkx_A CDP-glucose-4,6-dehydra 82.0 1.3 4.6E-05 42.3 4.9 34 204-237 7-41 (357)
493 3tsc_A Putative oxidoreductase 82.0 1.9 6.6E-05 40.0 5.9 37 202-239 7-44 (277)
494 3ftp_A 3-oxoacyl-[acyl-carrier 81.9 1.5 5.1E-05 41.0 5.1 36 202-238 24-60 (270)
495 3a06_A 1-deoxy-D-xylulose 5-ph 81.9 2.8 9.6E-05 41.9 7.3 44 207-260 4-50 (376)
496 1xq1_A Putative tropinone redu 81.9 1.4 4.8E-05 40.4 4.9 33 203-235 11-44 (266)
497 2a4k_A 3-oxoacyl-[acyl carrier 81.9 1.9 6.4E-05 40.0 5.8 35 203-238 3-38 (263)
498 3r8n_K 30S ribosomal protein S 81.8 3.1 0.0001 34.8 6.4 63 181-243 43-106 (117)
499 2p4h_X Vestitone reductase; NA 81.8 1.5 5E-05 41.1 5.1 31 206-236 1-32 (322)
500 2rh8_A Anthocyanidin reductase 81.8 1.8 6.1E-05 41.0 5.7 32 206-237 9-41 (338)
No 1
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=100.00 E-value=1.9e-130 Score=1001.57 Aligned_cols=407 Identities=43% Similarity=0.807 Sum_probs=401.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHHHHH
Q 015287 2 NALTATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVN 81 (410)
Q Consensus 2 ~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ev~ 81 (410)
++|++++++|++|+++++++|+++++|++|+|+++|+|||+||||++++|+|||||||+++||+||||||||++|++|++
T Consensus 16 ~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~~~vp~~~d~G~~~v~~GyRvqhn~a~GP~kGGiR~~p~v~~~ev~ 95 (424)
T 3k92_A 16 NLFLSTQTIIKEALRKLGYPGDMYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGGVRFHPEVNEEKVK 95 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCCSSSSEECCEEEETTCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHhcCCCeEEEEEEEEEecCCcEEEEEEEEEEECCcCCCCCCCeEecCCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhh
Q 015287 82 ALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFH 161 (410)
Q Consensus 82 ~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~ 161 (410)
+||++|||||||++||||||||||++||+++|+.|+||++|+|+++|.++|||+.|||||||||++++|+||+|+|++++
T Consensus 96 ~La~~mt~KnAl~~lP~GGgKggi~~DP~~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~ 175 (424)
T 3k92_A 96 ALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLR 175 (424)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCC
Q 015287 162 GHS-PAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITG 240 (410)
Q Consensus 162 g~~-~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G 240 (410)
|++ |+++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||+|||++|
T Consensus 176 g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G 255 (424)
T 3k92_A 176 EFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANG 255 (424)
T ss_dssp TSCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSC
T ss_pred CCCCcceeecccccCCCcCCCcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 974 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEeecccCCcccccccccccceEEEecCCCCCCHHHH
Q 015287 241 AIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEAD 320 (410)
Q Consensus 241 ~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p~t~~A~ 320 (410)
++|||+|||+++|++++++++++.+|+ ++.++++++|+++||||+|||++|+||++||++++||+||||||+|+||+|+
T Consensus 256 ~iyd~~GlD~~~l~~~~~~~g~i~~~~-a~~~~~~~i~~~~~DIliPcA~~n~I~~~~a~~l~ak~V~EgAN~p~t~eA~ 334 (424)
T 3k92_A 256 GLYNPDGLDIPYLLDKRDSFGMVTNLF-TDVITNEELLEKDCDILVPAAISNQITAKNAHNIQASIVVERANGPTTIDAT 334 (424)
T ss_dssp EEECTTCCCHHHHHHHCCSSSCCGGGC-SCCBCHHHHHHSCCSEEEECSCSSCBCTTTGGGCCCSEEECCSSSCBCHHHH
T ss_pred cEECCCCCCHHHHHHHHHHhCCCCCCC-cEEecCccceeccccEEeecCcccccChhhHhhcCceEEEcCCCCCCCHHHH
Confidence 999999999999999999999999998 7778889999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015287 321 EILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGVNRV 400 (410)
Q Consensus 321 ~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~~ri 400 (410)
++|++|||+|+||+++|+|||++|||||+||+++++|++|+|+++|+++|.++|+++++.++++++++|+|||++|++||
T Consensus 335 ~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~l~~~m~~~~~~v~~~a~~~~~~~~~aA~~~a~~rv 414 (424)
T 3k92_A 335 KILNERGVLLVPDILASAGGVTVSYFEWVQNNQGYYWSEEEVAEKLRSVMVSSFETIYQTAATHKVDMRLAAYMTGIRKS 414 (424)
T ss_dssp HHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEECchHhcCCCEEeehhHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC
Q 015287 401 AQATLLRGW 409 (410)
Q Consensus 401 ~~a~~~rg~ 409 (410)
++||+.|||
T Consensus 415 a~a~~~~G~ 423 (424)
T 3k92_A 415 AEASRFRGW 423 (424)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999999998
No 2
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=100.00 E-value=8.8e-126 Score=970.85 Aligned_cols=408 Identities=29% Similarity=0.471 Sum_probs=395.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCHHH---HHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHH
Q 015287 2 NALTATNRNFRYAARILGLDSKL---ERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPD 78 (410)
Q Consensus 2 ~~~~~~~~~~~~a~~~~~~~~~~---~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ 78 (410)
.|+|.+.++|+.++++++++|++ +++|++|+|+++|+|||+||||++++|+|||||||+++||+||||||||++|++
T Consensus 32 ef~qa~~e~~~~~~~~~~~~p~~~~~~~~l~~P~r~i~~~vp~~~D~G~~~v~~GyRvqhn~a~GPakGGiR~~p~v~~~ 111 (456)
T 3r3j_A 32 EFLQAFEEVLSCLKPVFKKDNVYIGVLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQYNSVLGPYKGGLRFHPAVNLS 111 (456)
T ss_dssp HHHHHHHHHHHHTHHHHHHCTHHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECTTCCHH
T ss_pred cHHHHHHHHHHHHHHHHhhChHhhHHHHhccCCceEEEEEEEEEeCCCcEEEEEEEEEEECCcCCCccCceEecCCCCHH
Confidence 37899999999999999999986 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhh
Q 015287 79 EVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYS 158 (410)
Q Consensus 79 ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~ 158 (410)
|+++||++|||||||++||||||||||++||+++|+.|+||++|+|+++|.++|||+.|||||||||++++|+||+|+|+
T Consensus 112 ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~ 191 (456)
T 3r3j_A 112 VIKFLGFEQIFKNSLTTLPMGGGKGGSDFDPKGKSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYK 191 (456)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCcceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 159 KFHGHSPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 159 ~~~g~~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++.+..++++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||+|||+
T Consensus 192 ~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~ 271 (456)
T 3r3j_A 192 KLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDS 271 (456)
T ss_dssp HHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECS
T ss_pred hhcCcccceecCCcccccCCCCCCcccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 99988899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeCCCCCCHHHHHHH---HHhC-CCcccC----CCCeeecCCcccccccceEeecccCCcccccccccc---cceEE
Q 015287 239 TGAIKNPNGIDVPALLKY---KKSN-KSLNDF----QGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADV---KAKFI 307 (410)
Q Consensus 239 ~G~i~~~~GlDi~~l~~~---~~~~-g~v~~~----~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i---~akiI 307 (410)
+|+||||+|||+++|.++ ++++ +++.+| ++++.++++++|+++||||+|||++|+||++||+++ +||+|
T Consensus 272 ~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~~i~~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V 351 (456)
T 3r3j_A 272 NGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQKPWNIPCDIAFPCATQNEINENDADLFIQNKCKMI 351 (456)
T ss_dssp SCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSCCGGGSCCSEEEECSCTTCBCHHHHHHHHHHTCCEE
T ss_pred CCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCCccccccCccEEEeCCCccchhhHHHHHHHhcCCeEE
Confidence 999999999999999865 4443 456654 788889999999999999999999999999999999 99999
Q ss_pred EecCCCCCCHHHHHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-
Q 015287 308 IEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNC- 386 (410)
Q Consensus 308 vEgAN~p~t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~- 386 (410)
|||||+|+||+|+++|++|||+|+||+++|||||++|||||+||.++++|++|+|+++|+++|.++|+++++.++++++
T Consensus 352 ~EgAN~p~T~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~L~~im~~~~~~~~~~a~~~~~~ 431 (456)
T 3r3j_A 352 VEGANMPTHIKALHKLKQNNIILCPSKAANAGGVAVSGLEMSQNSMRLQWTHQETDMKLQNIMKSIYEQCHNTSKIYLNE 431 (456)
T ss_dssp ECCSSSCBCTTHHHHHHTTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred EecCCCCCCHHHHHHHHHCCCEEeChHHhcCCceeeehHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -CHHHHHHHHHHHHHHHHHHHcCC
Q 015287 387 -NLRMGAFTLGVNRVAQATLLRGW 409 (410)
Q Consensus 387 -~~r~aA~~~A~~ri~~a~~~rg~ 409 (410)
++|+|||++|++||++||..||+
T Consensus 432 ~~~r~aA~i~~~~rva~a~~~~G~ 455 (456)
T 3r3j_A 432 SDLVAGANIAGFLKVADSFLEQGG 455 (456)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHhccHHHHHHHHHHHHhcCC
Confidence 99999999999999999999997
No 3
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=100.00 E-value=6.4e-125 Score=965.50 Aligned_cols=409 Identities=45% Similarity=0.738 Sum_probs=403.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCHHHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHHHH
Q 015287 1 MNALTATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEV 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ev 80 (410)
.+++++++++|++|+++++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|++|+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~G~rvqhn~a~GPakGGiR~~p~v~~~ev 108 (440)
T 3aog_A 29 GGPWEIFTEQVDRVVPYLGRLAPLAESLKRPKRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEVTLSEV 108 (440)
T ss_dssp CTHHHHHHHHHHHHGGGCGGGGGGGGGGGSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTTCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCHHHHHHhcCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEEEecCCHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhh
Q 015287 81 NALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKF 160 (410)
Q Consensus 81 ~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~ 160 (410)
++||++|||||||++||||||||||++||+.+|+.|+||++|+|+++|.++|||+.||||||+||++++|+||+++|+++
T Consensus 109 ~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~ 188 (440)
T 3aog_A 109 MALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMN 188 (440)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCC-CCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 161 HGH-SPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 161 ~g~-~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.|+ .|+++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|+++|+|||+|||++
T Consensus 189 ~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~ 268 (440)
T 3aog_A 189 VGRTVPGVVTGKPIALGGSLGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHT 268 (440)
T ss_dssp HTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred hCCCCCCeEeccchhhCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 987 4899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEeecccCCcccccccccccceEEEecCCCCCCHHH
Q 015287 240 GAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEA 319 (410)
Q Consensus 240 G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p~t~~A 319 (410)
|++|||+|||+++|++++++++++.+|++++.++++++|+.+||||+|||++|+||.+||++++||+||||||+|+||+|
T Consensus 269 G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~~~DIlvPcA~~n~i~~~na~~l~ak~VvEgAN~p~t~eA 348 (440)
T 3aog_A 269 GTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGLPVEFLVPAALEKQITEQNAWRIRARIVAEGANGPTTPAA 348 (440)
T ss_dssp CEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTCCCSEEEECSSSSCBCTTTGGGCCCSEEECCSSSCBCHHH
T ss_pred cEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcCCCcEEEecCCcCccchhhHHHcCCcEEEecCccccCHHH
Confidence 99999999999999999999999999999888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015287 320 DEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGVNR 399 (410)
Q Consensus 320 ~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~~r 399 (410)
+++|++|||+|+||+++|+|||++|||||+||+++++|++|+|+++|+++|.++++++++.|+++++++|+|||++|++|
T Consensus 349 ~~iL~~~GI~~~PD~~aNaGGV~vS~~E~~qN~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~~~~~~~~aA~~~a~~r 428 (440)
T 3aog_A 349 DDILLEKGVLVVPDVIANAGGVTVSYFEWVQDFNSYFWTEEEINARLERVLRNAFEAVWQVAQEKKIPLRTAAYVVAATR 428 (440)
T ss_dssp HHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC
Q 015287 400 VAQATLLRGW 409 (410)
Q Consensus 400 i~~a~~~rg~ 409 (410)
|++||..|||
T Consensus 429 va~a~~~~G~ 438 (440)
T 3aog_A 429 VLEARALRGL 438 (440)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHhcCC
Confidence 9999999997
No 4
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-124 Score=958.50 Aligned_cols=404 Identities=37% Similarity=0.626 Sum_probs=397.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHHHHH
Q 015287 2 NALTATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVN 81 (410)
Q Consensus 2 ~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ev~ 81 (410)
++|++++++|++|+++++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|++|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~hn~~~GPakGGiR~~p~v~~~ev~ 92 (419)
T 3aoe_E 13 GLWDTYLEWLERALKVAGVHPTTLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVVHDIARGPAKGGVRLDPGVTLGQTA 92 (419)
T ss_dssp HHHHHHHHHHHHHHTTSCCCHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECTTCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCHHHHhhcCCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEecCCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhh
Q 015287 82 ALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFH 161 (410)
Q Consensus 82 ~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~ 161 (410)
+||++|||||||++||||||||||++||+++|+.|+||++|+|+++|.++|||+.||||||+||++++|+||+++|+++.
T Consensus 93 ~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~ 172 (419)
T 3aoe_E 93 GLAAWMTLKAAVYDLPFGGAAGGIAVDPKGLSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTV 172 (419)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccEEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCC
Q 015287 162 GH-SPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITG 240 (410)
Q Consensus 162 g~-~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G 240 (410)
++ .|+++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||+|||++|
T Consensus 173 ~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G 252 (419)
T 3aoe_E 173 GSTVPGVVTGKPHALGGSEGRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMG 252 (419)
T ss_dssp TSCCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTE
T ss_pred CCCCCCeeeccchhcCCCCCCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 87 48999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEeecccCCcccccccccccceEEEecCCCCCCHHHH
Q 015287 241 AIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEAD 320 (410)
Q Consensus 241 ~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p~t~~A~ 320 (410)
++|||+|||+++|.+++++++++.+| .++++++|+.+||||+|||++|+||.+||++++||+|+||||+|+||+|+
T Consensus 253 ~i~dp~Gld~~~l~~~~~~~g~v~~~----~~~~~e~~~~~~DVliP~A~~n~i~~~~A~~l~ak~V~EgAN~p~t~~A~ 328 (419)
T 3aoe_E 253 GMYAPEGLDVAEVLSAYEATGSLPRL----DLAPEEVFGLEAEVLVLAAREGALDGDRARQVQAQAVVEVANFGLNPEAE 328 (419)
T ss_dssp EEECTTCCCHHHHHHHHHHHSSCSCC----CBCTTTGGGSSCSEEEECSCTTCBCHHHHTTCCCSEEEECSTTCBCHHHH
T ss_pred eEECCCCCCHHHHHHHHHhhCCccee----eccchhhhccCceEEEecccccccccchHhhCCceEEEECCCCcCCHHHH
Confidence 99999999999999999998889887 46788999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015287 321 EILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGVNRV 400 (410)
Q Consensus 321 ~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~~ri 400 (410)
++|++|||+|+||+++|||||++|||||+||++++.|++|+|+++|+++|.++++++++.|+++++++|+|||++|++||
T Consensus 329 ~~L~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~~~~~~~~aA~~~a~~rv 408 (419)
T 3aoe_E 329 AYLLGKGALVVPDLLSGGGGLLASYLEWVQDLNMFFWSPEEVRERFETRVARVVDAVCRRAERGGLDLRMGALALALERL 408 (419)
T ss_dssp HHHHHHTCEEECHHHHTCHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEECHHHHhCCCchhhHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC
Q 015287 401 AQATLLRGW 409 (410)
Q Consensus 401 ~~a~~~rg~ 409 (410)
+++|..|||
T Consensus 409 ~~a~~~~G~ 417 (419)
T 3aoe_E 409 DEATRLRGV 417 (419)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHhcCC
Confidence 999999997
No 5
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=100.00 E-value=1.2e-124 Score=961.64 Aligned_cols=408 Identities=41% Similarity=0.728 Sum_probs=382.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHHHHH
Q 015287 2 NALTATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVN 81 (410)
Q Consensus 2 ~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ev~ 81 (410)
++|++++++|++|+++++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~~p~~~d~G~~~~~~g~rv~hn~~~GP~kGGiR~~p~v~~~ev~ 85 (421)
T 2yfq_A 6 NPLVAAQEKVRIACEKLGCDPAVYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMDEVK 85 (421)
T ss_dssp CHHHHHHHHHHHHHHHHTCCHHHHHHHSSCSEEEEEEEEEEETTTEEEEEEEEEEECCCSSSSEEEEEEEESSCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCHHHHhhccCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCCHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhh
Q 015287 82 ALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFH 161 (410)
Q Consensus 82 ~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~ 161 (410)
+||++|||||||++||||||||||++||+++|+.|+||++|+|+++|.+++||+.||||||+||++++|+||+|+|+++.
T Consensus 86 ~La~~mt~KnAl~~lP~GGgKggi~~dP~~~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~ 165 (421)
T 2yfq_A 86 ALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLN 165 (421)
T ss_dssp HHHHHHHHHHHHHTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC--CceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 162 GHS--PAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 162 g~~--~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++ |+++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||++++++|++.|+|||+|||++
T Consensus 166 ~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 166 GERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp TTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred CCCCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 974 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -----CceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEeecccCCcccccccccccceEEEecCCCC
Q 015287 240 -----GAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHP 314 (410)
Q Consensus 240 -----G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p 314 (410)
|++|||+|||+++|.+++++++++.+|++++.++++++|+++||||+|||++|+||.+||.+++||+||||||+|
T Consensus 246 ~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~~n~i~~~~A~~l~ak~VvEgAN~P 325 (421)
T 2yfq_A 246 RNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAALENVITGERAKTINAKLVCEAANGP 325 (421)
T ss_dssp SSSCSBCCBCSSCCCHHHHHHHHHHHCC---------------------CEEECSCSSCSCHHHHTTCCCSEEECCSSSC
T ss_pred CCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCCcCcCCcccHHHcCCeEEEeCCccc
Confidence 999999999999999999999999999988888899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 015287 315 TDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFT 394 (410)
Q Consensus 315 ~t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~ 394 (410)
+||+|+++|++|||+|+||+++|+|||++|||||+||.++++|++|+|.++|+++|.++|+++++.|+++++++|+|||+
T Consensus 326 ~t~ea~~il~~~GI~~~Pd~~aNaGGV~vS~~E~~qN~~~~~w~~e~V~~~l~~~m~~~~~~v~~~A~~~g~~~~~aA~~ 405 (421)
T 2yfq_A 326 TTPEGDKVLTERGINLTPDILTNSGGVLVSYYEWVQNQYGYYWTEAEVEEKQEADMMKAIKGVFAVADEYNVTLREAVYM 405 (421)
T ss_dssp SCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred cCHHHHHHHHHCCCEEEChHHHhCCCeEEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCC
Q 015287 395 LGVNRVAQATLLRGW 409 (410)
Q Consensus 395 ~A~~ri~~a~~~rg~ 409 (410)
+|++||+++|+.|||
T Consensus 406 ~a~~rv~~a~~~~G~ 420 (421)
T 2yfq_A 406 YAIKSIDVAMKLRGW 420 (421)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999997
No 6
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=9e-124 Score=963.05 Aligned_cols=408 Identities=39% Similarity=0.647 Sum_probs=391.8
Q ss_pred CHHHHHHHHHHHHHHHcCCC------------------HHHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCC
Q 015287 2 NALTATNRNFRYAARILGLD------------------SKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARG 63 (410)
Q Consensus 2 ~~~~~~~~~~~~a~~~~~~~------------------~~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~G 63 (410)
+|++++..+|++|+++++.. +.++++|++|+|+|+|+|||+||||++++|+|||||||+++|
T Consensus 8 ~f~~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~vp~~~D~G~~~v~~GyRvqhn~a~G 87 (501)
T 3mw9_A 8 NFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRT 87 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCCCTTCSSHHHHHHHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCCSSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhhhHHHHHHHhCCCeEEEEEEEEEeCCCCEEEeeeEEEEECCCcC
Confidence 68999999999999999752 889999999999999999999999999999999999999999
Q ss_pred CCCCCeeeecCCCHHHHHHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHh--hccCCCCcccCC
Q 015287 64 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIH--DLIGIHRDVPAP 141 (410)
Q Consensus 64 PakGGiR~~~~~~~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~--~~iG~~~dipap 141 (410)
|+||||||||++|++|+++||++|||||||++||||||||||++||+.+|+.|++|++|+|+++|. ++|||..|||||
T Consensus 88 P~kGGiR~hp~v~l~ev~~La~~MT~KnAl~~LP~GGgKGgi~~DPk~~s~~El~r~~r~f~~eL~~~~~IGp~~dipAp 167 (501)
T 3mw9_A 88 PCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAP 167 (501)
T ss_dssp SEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCB
T ss_pred CCCCCeeecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCccCCHHHHHHHHHHHHHHHhhccCCCCCeeEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999998 499999999999
Q ss_pred CCCCCHHHHHHHHHHhhhhhCCC----CceecCccccCCCCCCCCchhHHHHHHHHHHHH------HHhCC--CCCCCeE
Q 015287 142 DMGTNSQTMAWILDEYSKFHGHS----PAVVTGKPIDLGGSLGREAATGLGVFFATEALL------AEHGK--SISNMKF 209 (410)
Q Consensus 142 Dvgt~~~~m~wi~d~~~~~~g~~----~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~------~~~g~--~l~g~~v 209 (410)
||||++++|+||+|+|+++.|.. ++++||||+.+|||.+|.++|||||++++++++ +.+|. +++|+||
T Consensus 168 DvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tV 247 (501)
T 3mw9_A 168 DMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTF 247 (501)
T ss_dssp CTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEE
Confidence 99999999999999999999863 689999999999999999999999999999865 46786 4899999
Q ss_pred EEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEeecc
Q 015287 210 AIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLVPCA 289 (410)
Q Consensus 210 aIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~DvliPaA 289 (410)
+||||||||+++|++|++.|+|||+|||++|+||||+|||+++|.+++++++++.+||+++.++ +++|+++||||+|||
T Consensus 248 aVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~~il~~~~DIliPcA 326 (501)
T 3mw9_A 248 VVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-GSILEVDCDILIPAA 326 (501)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-SCGGGSCCSEEEECS
T ss_pred EEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-cccccccceEEeecc
Confidence 9999999999999999999999999999999999999999999999999999999999998875 489999999999999
Q ss_pred cCCcccccccccccceEEEecCCCCCCHHHHHHHHhCCceEeccccccccCceehhHHHhhhcccC--------------
Q 015287 290 LGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGF-------------- 355 (410)
Q Consensus 290 ~~~~I~~~na~~i~akiIvEgAN~p~t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~-------------- 355 (410)
++|+||++||++++||+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||++++
T Consensus 327 ~~n~I~~~na~~l~akiV~EgAN~p~T~eA~~iL~~rGIl~~PD~~aNAGGV~vSy~E~~qn~~~~~~grl~~~~e~~~~ 406 (501)
T 3mw9_A 327 SEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSN 406 (501)
T ss_dssp SSCCBCTTTGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCSCTTTTTHHHHHHHH
T ss_pred ccCccCHhHHHHcCceEEEeCCCCcCCHHHHHHHHHCCCEEEChHHhcCchHHhhHHHHHhccccccccccchhhhcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHcC--CCHHHHHHHHHH
Q 015287 356 MWEEEKVNHELKRY------------------------------------MMSAFKDIKTMCQTHN--CNLRMGAFTLGV 397 (410)
Q Consensus 356 ~w~~~~v~~~l~~~------------------------------------m~~~~~~v~~~a~~~~--~~~r~aA~~~A~ 397 (410)
+|++++|+++|+++ |.++++++++.+++++ +++|+|||++|+
T Consensus 407 ~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~ga~e~d~v~sgL~~~m~~a~~~v~~~a~~~~~~~~lRtAAy~~ai 486 (501)
T 3mw9_A 407 YHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAI 486 (501)
T ss_dssp HHHHHHHHHHHHHHSCTTTCCCCCCCCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cccHHHHHHHHHhhhcccccccccCchHHHHHHHcCCcHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 49999999888876 9999999999999988 699999999999
Q ss_pred HHHHHHHHHcCCC
Q 015287 398 NRVAQATLLRGWE 410 (410)
Q Consensus 398 ~ri~~a~~~rg~~ 410 (410)
+||+++++.||+.
T Consensus 487 ~rv~~a~~~~G~~ 499 (501)
T 3mw9_A 487 EKVFRVYNEAGVT 499 (501)
T ss_dssp HHHHHHHHHTTSC
T ss_pred HHHHHHHHHcCcc
Confidence 9999999999974
No 7
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=100.00 E-value=3.1e-123 Score=956.04 Aligned_cols=408 Identities=25% Similarity=0.404 Sum_probs=396.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCH---HHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHH
Q 015287 2 NALTATNRNFRYAARILGLDS---KLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPD 78 (410)
Q Consensus 2 ~~~~~~~~~~~~a~~~~~~~~---~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ 78 (410)
.|+|+++++|+.|+++++++| +++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|++
T Consensus 45 e~~~~~~~~~~~~~~~~~~~p~~~~~le~l~~Per~i~~~vp~~~D~G~v~v~~Gyrvqhn~a~GPakGGiR~hp~v~~~ 124 (470)
T 2bma_A 45 EFLQAFHEILYSLKPLFMEEPKYLPIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQYNSALGPYKGGLRFHPSVNLS 124 (470)
T ss_dssp HHHHHHHHHHHHTHHHHHHCTTHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECTTCCHH
T ss_pred hHHHHHHHHHHHHHHHhccChhhhHHHHHhcCCceEEEEEEEEEeCCCCEEEEEEEEEEECCCCCCCCCCeEeeCCCCHH
Confidence 378999999999999999999 79999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhh
Q 015287 79 EVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYS 158 (410)
Q Consensus 79 ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~ 158 (410)
|+++||++|||||||++||||||||||++||+++|+.|+|||+|+|+++|.++|||+.||||||+||++++|+||+++|+
T Consensus 125 ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~ 204 (470)
T 2bma_A 125 IVKFLGFEQIFKNSLTGLSMGGGKGGSDFDPKGKSDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYK 204 (470)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCcCCHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 159 KFHGHSPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 159 ~~~g~~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++.+++.+++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||+|||+
T Consensus 205 ~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~ 284 (470)
T 2bma_A 205 KIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDS 284 (470)
T ss_dssp HHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEET
T ss_pred HhcCCcccEEeCCCccCCCCCCccccchHHHHHHHHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeC
Confidence 99998779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeCCCCC---CHHHHHHHHHhC-CCcccCC----CCeeecCCcccccccceEeecccCCcccccccccc---cceEE
Q 015287 239 TGAIKNPNGI---DVPALLKYKKSN-KSLNDFQ----GGNAMDLNDLLVHECDVLVPCALGGVLNKENAADV---KAKFI 307 (410)
Q Consensus 239 ~G~i~~~~Gl---Di~~l~~~~~~~-g~v~~~~----~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i---~akiI 307 (410)
+|+||||+|| |++.|+++++++ +++.+|+ +++.++++++|+++||||+|||++|+||.+||+++ +||+|
T Consensus 285 ~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~~~~~~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V 364 (470)
T 2bma_A 285 NGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNEKPWGVPCTLAFPCATQNDVDLDQAKLLQKNGCILV 364 (470)
T ss_dssp TEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSSCCTTSSCCSEEEECSSTTCBCSHHHHHHHHTTCCEE
T ss_pred CceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecCcCeeecCccEEEeccccCcCCHHHHHHHHhcCcEEE
Confidence 9999999999 666777887775 6888874 67788889999999999999999999999999999 99999
Q ss_pred EecCCCCCCHHHHHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-
Q 015287 308 IEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNC- 386 (410)
Q Consensus 308 vEgAN~p~t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~- 386 (410)
|||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+++|.++|+++++.++++++
T Consensus 365 ~EgAN~p~T~eA~~~L~~rGIl~~PD~~aNAGGV~~S~~E~~qn~~~~~w~~eev~~~L~~im~~~~~~~~~~a~~~~~~ 444 (470)
T 2bma_A 365 GEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLEMSQNFQFSHWTRETVDEKLKEIMRNIFIACSENALKYTKN 444 (470)
T ss_dssp ECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred EeCCCCCCCHHHHHHHHHCCcEEEChHHhhCCCceeeHHHhhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --CHHHHHHHHHHHHHHHHHHHcCC
Q 015287 387 --NLRMGAFTLGVNRVAQATLLRGW 409 (410)
Q Consensus 387 --~~r~aA~~~A~~ri~~a~~~rg~ 409 (410)
++|+|||++|++||++||..|||
T Consensus 445 ~~~~r~~A~i~~~~rva~am~~~G~ 469 (470)
T 2bma_A 445 KYDLQAGANIAGFLKVAESYIEQGC 469 (470)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999997
No 8
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=2.8e-123 Score=950.31 Aligned_cols=409 Identities=39% Similarity=0.668 Sum_probs=401.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCHHHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHHHH
Q 015287 1 MNALTATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEV 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ev 80 (410)
+++|+++.+++++++..++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~r~i~v~~p~~~D~G~~~~~~G~rv~~~~~~GpakGG~R~~p~v~~~ev 83 (421)
T 1v9l_A 4 TGFLEYVLNYVKKGVELGGFPEDFYKILSRPRRVLIVNIPVRLDGGGFEVFEGYRVQHCDVLGPYKGGVRFHPEVTLADD 83 (421)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHSCSEEEEEEEEEECSSSCEEEEEEEEEEEECSSSSEEEEEECCTTCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCHHHHHhccCCceEEEEEEEEEecCCcEEEEEEEEeecCCcCCCccccEEecCCCCHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhh
Q 015287 81 NALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKF 160 (410)
Q Consensus 81 ~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~ 160 (410)
++||++|||||||++||+|||||||++||+.+|+.|+||++|+|+++|.+++||..||||||+||++++|+||+++|+++
T Consensus 84 ~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~~~~m~~~~~~y~~~ 163 (421)
T 1v9l_A 84 VALAILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWMVDEYSKI 163 (421)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEEECSCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCC-CCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 161 HGH-SPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 161 ~g~-~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++ .|+++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||++++++|++.|+|||+|||++
T Consensus 164 ~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~ 243 (421)
T 1v9l_A 164 KGYNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDIN 243 (421)
T ss_dssp HTSCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred hCCCCCCeEeccchhhCCCCCcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 987 4899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeCCCCCCHHHHHHHHHhCCC--cccCCCC---eee-cCCcccccccceEeecccCCcccccccccccceEEEecCCC
Q 015287 240 GAIKNPNGIDVPALLKYKKSNKS--LNDFQGG---NAM-DLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANH 313 (410)
Q Consensus 240 G~i~~~~GlDi~~l~~~~~~~g~--v~~~~~~---~~i-~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~ 313 (410)
|++|||+|||+++|.++++++++ +.+|+++ +.+ +++++|+++||||+|||++++||.+||++++||+|+||||+
T Consensus 244 G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~~~~~~Dil~P~A~~~~I~~~~a~~l~ak~V~EgAN~ 323 (421)
T 1v9l_A 244 GVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIFKLDVDIFVPAAIENVIRGDNAGLVKARLVVEGANG 323 (421)
T ss_dssp CEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGGGCCCSEEEECSCSSCBCTTTTTTCCCSEEECCSSS
T ss_pred cEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchhhhcCCccEEEecCcCCccchhhHHHcCceEEEecCCC
Confidence 99999999999999999998888 8888876 677 88999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHH
Q 015287 314 PTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQ-THNCNLRMGA 392 (410)
Q Consensus 314 p~t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~-~~~~~~r~aA 392 (410)
|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+++|.++++++++.|+ ++++++|+||
T Consensus 324 p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~e~v~~~l~~im~~~~~~v~~~a~~~~~~~~~~aA 403 (421)
T 1v9l_A 324 PTTPEAERILYERGVVVVPDILANAGGVIMSYLEWVENLQWYIWDEEETRKRLENIMVNNVERVYKRWQREKGWTMRDAA 403 (421)
T ss_dssp CBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCHHHHH
T ss_pred cCCHHHHHHHHHCCCEEeChHHhhCCCeeeeHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHHcCC
Q 015287 393 FTLGVNRVAQATLLRGW 409 (410)
Q Consensus 393 ~~~A~~ri~~a~~~rg~ 409 (410)
|++|++||+++|+.|||
T Consensus 404 ~~~a~~rv~~a~~~~G~ 420 (421)
T 1v9l_A 404 IVTALERIYNAMKIRGW 420 (421)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 99999999999999997
No 9
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=100.00 E-value=2.5e-122 Score=942.41 Aligned_cols=409 Identities=47% Similarity=0.798 Sum_probs=401.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCHHHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHHHH
Q 015287 1 MNALTATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEV 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ev 80 (410)
+++|++++++|++|++.++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~~~~~~GpakGGiR~~p~v~~~ev 82 (415)
T 2tmg_A 3 KSLYEMAVEQFNRAASLMDLESDLAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDEV 82 (415)
T ss_dssp -CHHHHHHHHHHHHHHHTTCCHHHHHHHHSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEEESSCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCHHHHHhcCCCCeEEEEEEEEEecCCcEEEEEEEEEEECCCCCCCCCcEEeeCCCCHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhh
Q 015287 81 NALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKF 160 (410)
Q Consensus 81 ~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~ 160 (410)
++||++|||||||++||+|||||||++||+++|+.|+||++|+|+++|.+++||..||||||+||++++|+||+++|+++
T Consensus 83 ~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~ 162 (415)
T 2tmg_A 83 KALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMN 162 (415)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCC-CCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHH-CCCEEEEEECC
Q 015287 161 HGH-SPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDI 238 (410)
Q Consensus 161 ~g~-~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~ 238 (410)
+++ .|+++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||++++++|++ +|+|||+|||+
T Consensus 163 ~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 163 VGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp HSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 987 4899999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEeecccCCcccccccccccceEEEecCCCCCCHH
Q 015287 239 TGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPE 318 (410)
Q Consensus 239 ~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p~t~~ 318 (410)
+|++|||+|||+++|++++++++++.+|++++.++++++|+.+||||+|||++|+||++||++++||+|+||||+|+||+
T Consensus 243 ~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~~~~DIliP~A~~n~i~~~~a~~l~ak~V~EgAN~p~t~~ 322 (415)
T 2tmg_A 243 RGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLELDVDILVPAALEGAIHAGNAERIKAKAVVEGANGPTTPE 322 (415)
T ss_dssp SCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTTCSCSEEEECSSTTSBCHHHHTTCCCSEEECCSSSCBCHH
T ss_pred CCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhcCCCcEEEecCCcCccCcccHHHcCCeEEEeCCCcccCHH
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015287 319 ADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGVN 398 (410)
Q Consensus 319 A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~~ 398 (410)
|+++|++|||+|+||+++|+|||++|||||+||.++++|++|+|+++|+++|.++|+++++.|+++++++|+|||++|++
T Consensus 323 a~~~l~~~Gi~~~PD~~aNaGGV~~s~~E~vqN~~~~~w~~e~v~~~l~~~m~~~~~~v~~~A~~~g~~~~~aA~~~a~~ 402 (415)
T 2tmg_A 323 ADEILSRRGILVVPDILANAGGVTVSYFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKYNVDMRTAAYILAID 402 (415)
T ss_dssp HHHHHHHTTCEEECHHHHTCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC
Q 015287 399 RVAQATLLRGW 409 (410)
Q Consensus 399 ri~~a~~~rg~ 409 (410)
||++||..|||
T Consensus 403 rv~~a~~~~G~ 413 (415)
T 2tmg_A 403 RVAYATKKRGI 413 (415)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHhcCC
Confidence 99999999997
No 10
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=100.00 E-value=1.1e-121 Score=941.09 Aligned_cols=407 Identities=30% Similarity=0.466 Sum_probs=383.9
Q ss_pred HHHHHHHHHHHHHHHcCCCHH-----HHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCH
Q 015287 3 ALTATNRNFRYAARILGLDSK-----LERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDP 77 (410)
Q Consensus 3 ~~~~~~~~~~~a~~~~~~~~~-----~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~ 77 (410)
|+|.+.+.++.-..+++-.|+ ++++|.+|+|+|+|+|||+||||++++|+|||||||+++||+||||||||++|+
T Consensus 27 f~qa~~e~~~~l~~~~~~~p~y~~~~~~e~l~~PeR~i~~~vp~~~D~G~~~v~~GyRvqhn~alGP~kGG~Rfhp~v~l 106 (450)
T 4fcc_A 27 FAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVNL 106 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGTSTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECTTCCH
T ss_pred HHHHHHHHHHHHHHHHHhChhhhhhhHHHHHhCCceEEEEEEEEEECCCcEEEEEEEEEEECCCCCCCCCceEecCCCCH
Confidence 345555555555566665665 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHh
Q 015287 78 DEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEY 157 (410)
Q Consensus 78 ~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~ 157 (410)
+|+++||++|||||||++||||||||||++||+++|+.|++|++|+|+++|.++|||+.|||+||+||++++|+||+++|
T Consensus 107 ~ev~~La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y 186 (450)
T 4fcc_A 107 SILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMM 186 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEEC
Q 015287 158 SKFHGHSPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 158 ~~~~g~~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 237 (410)
+++.+.+|+++||||+.+|||.+|.++|||||+++++++++.++.+++|+||+||||||||+++|++|++.|+|||++||
T Consensus 187 ~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD 266 (450)
T 4fcc_A 187 KKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASD 266 (450)
T ss_dssp HHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hhccCCCceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEec
Confidence 99999899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeCCCCCCHHHHHHHHHh----CCCcccCC---CCeeecCCcccccccceEeecccCCcccccccccccc---eEE
Q 015287 238 ITGAIKNPNGIDVPALLKYKKS----NKSLNDFQ---GGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKA---KFI 307 (410)
Q Consensus 238 ~~G~i~~~~GlDi~~l~~~~~~----~g~v~~~~---~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~a---kiI 307 (410)
++|++|||+|||+++|.++++. ++.+.+|+ +++.++++++|+++||||+|||++|+||++||++++| |+|
T Consensus 267 ~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~I 346 (450)
T 4fcc_A 267 SSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQLIANGVKAV 346 (450)
T ss_dssp TTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCTTCBCHHHHHHHHHTTCCEE
T ss_pred CCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEecCcccccCCccEEeeccccccccHHHHHHHHhcCceEE
Confidence 9999999999999999887653 34454443 5678899999999999999999999999999999974 999
Q ss_pred EecCCCCCCHHHHHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCC
Q 015287 308 IEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQT-HNC 386 (410)
Q Consensus 308 vEgAN~p~t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~-~~~ 386 (410)
+||||+|+||+|+++|++|||+|+||+++||||||+|||||+||+++++|++|+|+++|+++|.++|+++++.+++ +.+
T Consensus 347 aEgAN~p~t~eA~~iL~~rGIl~~PD~~aNAGGVi~S~~E~~qn~~~~~w~~eeV~~kL~~im~~~~~~~~~~~~e~~~~ 426 (450)
T 4fcc_A 347 AEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHACVEHGGEGEQT 426 (450)
T ss_dssp ECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHTSCSSSSC
T ss_pred ecCCCCCCCHHHHHHHHHCCCEEEChHHhcCccHhhhHHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998865 568
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCC
Q 015287 387 NLRMGAFTLGVNRVAQATLLRGW 409 (410)
Q Consensus 387 ~~r~aA~~~A~~ri~~a~~~rg~ 409 (410)
++|+|||++|++||++||..|||
T Consensus 427 ~~~~aA~i~a~~rVa~Am~~~G~ 449 (450)
T 4fcc_A 427 NYVQGANIAGFVKVADAMLAQGV 449 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999997
No 11
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=100.00 E-value=2.1e-119 Score=926.61 Aligned_cols=408 Identities=30% Similarity=0.499 Sum_probs=397.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCHH-----HHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCC
Q 015287 2 NALTATNRNFRYAARILGLDSK-----LERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVD 76 (410)
Q Consensus 2 ~~~~~~~~~~~~a~~~~~~~~~-----~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~ 76 (410)
+|+|+++++|++|+++++++|+ ++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Per~i~~~vp~~~d~G~~~v~~G~rv~hn~~~GPakGGlR~~p~v~ 99 (449)
T 1bgv_A 20 EFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYKGGLRFAPSVN 99 (449)
T ss_dssp HHHHHHHHHHHTTHHHHHTCHHHHHTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECTTCC
T ss_pred cHHHHHHHHHHHHHHHhccChhhhhhhHHHHhcCCceEEEEEEEEEeCCCCEEEEeEEEEEEcCCcCCCCCCeeecCCCC
Confidence 4799999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHH
Q 015287 77 PDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDE 156 (410)
Q Consensus 77 ~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~ 156 (410)
++|+++||++|||||||++||+|||||||++||+++|+.|++|++|+|+++|.++|||+.||||||+||++++|+||+++
T Consensus 100 ~~ev~~La~~mt~KnAl~~lP~GGgKGGi~~dP~~~s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~ 179 (449)
T 1bgv_A 100 LSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQ 179 (449)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCccEEEECCCccCCHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCC-CCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEE
Q 015287 157 YSKFHGH-SPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 157 ~~~~~g~-~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaV 235 (410)
|+++.++ .++++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||++++++|++.|+|||+|
T Consensus 180 y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVav 259 (449)
T 1bgv_A 180 YRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTL 259 (449)
T ss_dssp HHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 9999886 479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCceeCCCCC----CHHHHHHHHHhC-CCcccCCC---CeeecCCcccccccceEeecccCCcccccccccccc---
Q 015287 236 SDITGAIKNPNGI----DVPALLKYKKSN-KSLNDFQG---GNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKA--- 304 (410)
Q Consensus 236 sD~~G~i~~~~Gl----Di~~l~~~~~~~-g~v~~~~~---~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~a--- 304 (410)
||++|++|||+|| |+++|+++++++ +++.+|+. ++.++++++|+++||||+|||++++||.+||++++|
T Consensus 260 sD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~~~e~~~~~~Dil~P~A~~~~I~~~na~~l~a~g~ 339 (449)
T 1bgv_A 260 SGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFPGEKPWGQKVDIIMPCATQNDVDLEQAKKIVANNV 339 (449)
T ss_dssp EETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEETCCGGGSCCSEEECCSCTTCBCHHHHHHHHHTTC
T ss_pred EeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeCchhhhcCCcceeeccccccccchhhHHHHHhcCC
Confidence 9999999999999 788899999886 68888865 678888899999999999999999999999999997
Q ss_pred eEEEecCCCCCCHHHHHHHHhC-CceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015287 305 KFIIEAANHPTDPEADEILSKK-GVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQT 383 (410)
Q Consensus 305 kiIvEgAN~p~t~~A~~iL~~r-GI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~ 383 (410)
|+|+||||+|+||+|+++|++| ||+|+||+++|||||++|||||+||++++.|++++|+++|+++|.+.++.+++.+++
T Consensus 340 kiV~EgAN~p~T~eA~~~l~~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~L~~~m~~~~~~v~~~a~~ 419 (449)
T 1bgv_A 340 KYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFEMSQNSERLSWTAEEVDSKLHQVMTDIHDGSAAAAER 419 (449)
T ss_dssp CEEECCSSSCBCHHHHHHHHHCTTCEEECHHHHTTHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCCcCCHHHHHHHHHcCCEEEEChHHhcCCCceeehhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC--CHHHHHHHHHHHHHHHHHHHcCC
Q 015287 384 HNC--NLRMGAFTLGVNRVAQATLLRGW 409 (410)
Q Consensus 384 ~~~--~~r~aA~~~A~~ri~~a~~~rg~ 409 (410)
+++ ++|+|||+.|++||++||+.|||
T Consensus 420 ~~~~~~~~~~A~i~~~~rv~~a~~~~G~ 447 (449)
T 1bgv_A 420 YGLGYNLVAGANIVGFQKIADAMMAQGI 447 (449)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hCCCCCHHHHhhHHHHHHHHHHHHhcCc
Confidence 999 89999999999999999999996
No 12
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=100.00 E-value=6.7e-109 Score=847.08 Aligned_cols=409 Identities=45% Similarity=0.755 Sum_probs=400.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCHHHHHhccCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHHHH
Q 015287 1 MNALTATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEV 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~ev 80 (410)
.++|++++++|++|++.++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~~~~~~p~~~d~G~~~~~~g~rv~~~~~~Gp~kGG~R~~~~~~~~ev 82 (419)
T 1gtm_A 3 ADPYEIVIKQLERAAQYMEISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPEETLSTV 82 (419)
T ss_dssp CTHHHHHHHHHHHHGGGSCCCHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTTCCHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChhhhhcCCCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCCHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhh
Q 015287 81 NALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKF 160 (410)
Q Consensus 81 ~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~ 160 (410)
++||++|||||||++||+|||||||++||+++|+.|+||++|+|+++|.+++||..||||||+||++++|+||+++|+++
T Consensus 83 ~~La~~mt~Knal~~lp~GG~Kggi~~dP~~~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~~~~m~~~~~~y~~~ 162 (419)
T 1gtm_A 83 KALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYETI 162 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCC-C--ceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCC-CCCCeEEEEccChHHHHHHHHHHH-CCCEEEEE
Q 015287 161 HGHS-P--AVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKS-ISNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAV 235 (410)
Q Consensus 161 ~g~~-~--~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~-l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaV 235 (410)
+++. | +++||||+.+|||.+|.++|||||+++++++++.+|.+ ++|+||+||||||||+.+|++|++ .|++|+++
T Consensus 163 ~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~ 242 (419)
T 1gtm_A 163 SRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAV 242 (419)
T ss_dssp HTTSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCCCccceEecCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEE
Confidence 9974 7 89999999999999999999999999999999999999 999999999999999999999999 99999999
Q ss_pred ECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEeecccCCcccccccccccceEEEecCCCCC
Q 015287 236 SDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPT 315 (410)
Q Consensus 236 sD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p~ 315 (410)
+|++|.+|+++|+|+++|+++++..+++..||..+.+++++++..+||||||||.+++||+++++.++++.|+|+||.|+
T Consensus 243 sD~~g~~~~~~gvdl~~L~~~~d~~~~l~~l~~t~~i~~~~l~~mk~dilIn~ArG~~Vde~a~~aL~~~~I~~aAneP~ 322 (419)
T 1gtm_A 243 SDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANGPV 322 (419)
T ss_dssp ECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEECHHHHHHSCCSEEEECSCSCCBCTTGGGGCCCSEEECCSSSCB
T ss_pred eCCCccccCccCCCHHHHHHHHHhcCEeecCccCeeeCHHHHHhCCCCEEEECCCcccCCHHHHHHhcCCEEEEeeCCCC
Confidence 99999999999999999999988777888888777788888999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 015287 316 DPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTL 395 (410)
Q Consensus 316 t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 395 (410)
|+++..+|..+||++.||+++|+|||++||+||+||+++++|+.+++.++|+++|.+++.++++.|+++++++|+|||++
T Consensus 323 t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~~a~~~~~~~~~aA~~~ 402 (419)
T 1gtm_A 323 TPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYNIAKEKNIHMRDAAYVV 402 (419)
T ss_dssp CHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CcchHHHHhcCCEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC
Q 015287 396 GVNRVAQATLLRGW 409 (410)
Q Consensus 396 A~~ri~~a~~~rg~ 409 (410)
|++||++||..|||
T Consensus 403 a~~rv~~a~~~~g~ 416 (419)
T 1gtm_A 403 AVQRVYQAMLDRGW 416 (419)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999997
No 13
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=100.00 E-value=4.2e-90 Score=693.44 Aligned_cols=336 Identities=28% Similarity=0.399 Sum_probs=311.6
Q ss_pred cCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHH----HHHHHHHHHHHHHhhcCCCCCCceeE
Q 015287 29 LIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPD----EVNALAQLMTWKTAVAAIPYGGAKGG 104 (410)
Q Consensus 29 ~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~----ev~~LA~~Mt~K~Al~~lp~GGaKgg 104 (410)
..|++++.++-| ...|+|||||||+++||+||||||||++|.+ |+++||++|||||||++|||||||||
T Consensus 8 ~~~e~v~~~~d~-------~~~~~~~~~~h~~~~GP~kGG~R~~p~v~~~~~~~ev~~La~~mt~K~al~~lp~GG~Kgg 80 (355)
T 1c1d_A 8 WDGEMTVTRFDA-------MTGAHFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSV 80 (355)
T ss_dssp CCSSEEEEEEET-------TTTEEEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCccEEEEEEcc-------ccceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhhCCCCCCceee
Confidence 479999998877 4679999999999999999999999999876 89999999999999999999999999
Q ss_pred Eec-CCCC-CCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhhCCCCceecCccccCCCCCCCC
Q 015287 105 IGC-NPRE-LSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRE 182 (410)
Q Consensus 105 I~~-dP~~-~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~g~~~~~~tGkp~~~GGs~gr~ 182 (410)
|++ ||+. +|+.|+|+++|+|.++|.+++|+| |||||+||++++|+||+++|+ ++||||+.+|||.+|.
T Consensus 81 i~~~dP~~~~s~~~~e~~~r~~~~~~~~l~g~~--ipa~D~gt~~~~m~~~~~~~~--------~~tGk~~~~GGs~~~~ 150 (355)
T 1c1d_A 81 IALPAPRHSIDPSTWARILRIHAENIDKLSGNY--WTGPDVNTNSADMDTLNDTTE--------FVFGRSLERGGAGSSA 150 (355)
T ss_dssp EECSSCGGGCCHHHHHHHHHHHHHHHHHTTTSE--EEEECTTCCHHHHHHHHHHCS--------CBCCCCGGGTSCCCCH
T ss_pred EeccCcccccChhhHHHHHHHHHHHHHHhcCCc--ccCCCCCCCHHHHHHHHHhcC--------eeeccchhhCCCCCch
Confidence 999 9999 999999999999999999999985 999999999999999999987 5999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhCC-CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCC
Q 015287 183 AATGLGVFFATEALLAEHGK-SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNK 261 (410)
Q Consensus 183 ~aTg~Gv~~~~~~~~~~~g~-~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g 261 (410)
++|||||++++++++++.|. +++|+||+||||||||+++|++|++.|+||| ++|++ .+. .++.++
T Consensus 151 ~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~----------~~~-~~~a~~-- 216 (355)
T 1c1d_A 151 FTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD----------TER-VAHAVA-- 216 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHH-HHHHHH--
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC----------ccH-HHHHHh--
Confidence 99999999999999999998 7999999999999999999999999999999 99974 232 333333
Q ss_pred CcccCCCCeeecCCcccccccceEeecccCCcccccccccccceEEEecCCCCCC-HHHHHHHHhCCceEeccccccccC
Q 015287 262 SLNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTD-PEADEILSKKGVVILPDIYANSGG 340 (410)
Q Consensus 262 ~v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p~t-~~A~~iL~~rGI~v~PD~laNaGG 340 (410)
| +++.++++++|..+||||+|||++++||++|++.++|++|+|+||+|+| ++|.++|+++||+++||+++|+||
T Consensus 217 ----~-ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~~aNaGG 291 (355)
T 1c1d_A 217 ----L-GHTAVALEDVLSTPCDVFAPCAMGGVITTEVARTLDCSVVAGAANNVIADEAASDILHARGILYAPDFVANAGG 291 (355)
T ss_dssp ----T-TCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHHCCCSEECCSCTTCBCSHHHHHHHHHTTCEECCHHHHTTHH
T ss_pred ----c-CCEEeChHHhhcCccceecHhHHHhhcCHHHHhhCCCCEEEECCCCCCCCHHHHHHHHhCCEEEECCeEEcCCC
Confidence 2 4566777899999999999999999999999999999999999999987 499999999999999999999999
Q ss_pred ceehh-HHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHc
Q 015287 341 VTVSY-FEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGVNRVAQATLLR 407 (410)
Q Consensus 341 Vi~s~-~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~~ri~~a~~~r 407 (410)
|++|| ||| ++|++|+|+++|+++| +++++|++.|+++++++|+|||++|++||++||..+
T Consensus 292 V~~s~~~E~------~~w~~e~v~~~l~~i~-~~~~~i~~~~~~~~~~~~~aA~~~a~~rv~~a~~~~ 352 (355)
T 1c1d_A 292 AIHLVGREV------LGWSESVVHERAVAIG-DTLNQVFEISDNDGVTPDEAARTLAGRRAREASTTT 352 (355)
T ss_dssp HHHHHHHHT------TCCCHHHHHHHHHTHH-HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTC---
T ss_pred eeeeeeehh------cCCCHHHHHHHHHHHH-HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhhc
Confidence 99999 999 6799999999999987 899999999999999999999999999999998765
No 14
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=4.7e-86 Score=667.07 Aligned_cols=336 Identities=26% Similarity=0.365 Sum_probs=312.2
Q ss_pred cCCCeEEEEEEEEEeCCCceeEEEEEEEEeeCCCCCCCCCeeeecCCCHH----HHHHHHHHHHHHHhhcCCCCCCceeE
Q 015287 29 LIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPD----EVNALAQLMTWKTAVAAIPYGGAKGG 104 (410)
Q Consensus 29 ~~p~r~~~v~~p~~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~~~~~~~----ev~~LA~~Mt~K~Al~~lp~GGaKgg 104 (410)
..|++++.++-| ...|+|||||||+++||+||||||||++|.+ |+++||++|||||||++|||||||||
T Consensus 10 ~~~e~v~~~~d~-------~~~~~~~~~~h~~~~Gp~kGG~R~~p~v~~~~~~~e~~~La~~mt~K~al~~lp~GG~Kgg 82 (364)
T 1leh_A 10 YDYEQLVFCQDE-------ASGLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTV 82 (364)
T ss_dssp HTCCEEEEEEET-------TTTEEEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred cCCeEEEEEEcc-------CcceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhcCCCCcCcceE
Confidence 459999988865 4679999999999999999999999999977 89999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhhCCCCceecCccccCCCCCCCCch
Q 015287 105 IGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAA 184 (410)
Q Consensus 105 I~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~g~~~~~~tGkp~~~GGs~gr~~a 184 (410)
|.+||+.++. |+++|+|.+++.+++|+| |||||+||++++|+||+++|+ ++||||+.+|||.+|.++
T Consensus 83 i~~dP~~~~~---~~~~r~~~~~~~~l~g~~--i~A~D~Gt~~~~m~~l~~~~~--------~~tGK~~~~ggs~~~~~a 149 (364)
T 1leh_A 83 IIGDPFADKN---EDMFRALGRFIQGLNGRY--ITAEDVGTTVDDMDLIHQETD--------YVTGISPAFGSSGNPSPV 149 (364)
T ss_dssp EESCTTTTCC---HHHHHHHHHHHHTTTTSE--EBCBCTTCCHHHHHHHHTTCS--------CBCSCCHHHHHHCCHHHH
T ss_pred EeCCCCCCCH---HHHHHHHHHHHHHhcCce--EEcccCCCCHHHHHHHHHhcc--------hhcccccccCCCCCcccc
Confidence 9999999763 679999999999999985 999999999999999999986 589999999999999999
Q ss_pred hHHHHHHHHHHHHHH-hCC-CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCC
Q 015287 185 TGLGVFFATEALLAE-HGK-SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKS 262 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~~-~g~-~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~ 262 (410)
||+||++++++++++ +|. +++|+||+|||+||||+.+|+.|++.|++|| ++|. |.+.+.++.++.
T Consensus 150 Tg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVv-v~D~----------~~~~l~~~a~~~-- 216 (364)
T 1leh_A 150 TAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLV-VTDV----------NKAAVSAAVAEE-- 216 (364)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHHHHHHHHH--
T ss_pred hhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCEEE-EEcC----------CHHHHHHHHHHc--
Confidence 999999999999996 586 7999999999999999999999999999999 9985 567777766652
Q ss_pred cccCCCCeeecCCcccccccceEeecccCCcccccccccccceEEEecCCCCCC-HHHHHHHHhCCceEeccccccccCc
Q 015287 263 LNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKAKFIIEAANHPTD-PEADEILSKKGVVILPDIYANSGGV 341 (410)
Q Consensus 263 v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p~t-~~A~~iL~~rGI~v~PD~laNaGGV 341 (410)
+++.++.++++..+|||++||+++++||.++++.++|++|+|+||+|+| +++.++|+++||+++||+++|+|||
T Consensus 217 -----ga~~v~~~~ll~~~~DIvip~a~~~~I~~~~~~~lg~~iV~e~An~p~t~~ea~~~L~~~Gi~~~Pd~~~NaGGv 291 (364)
T 1leh_A 217 -----GADAVAPNAIYGVTCDIFAPCALGAVLNDFTIPQLKAKVIAGSADNQLKDPRHGKYLHELGIVYAPDYVINAGGV 291 (364)
T ss_dssp -----CCEECCGGGTTTCCCSEEEECSCSCCBSTTHHHHCCCSEECCSCSCCBSSHHHHHHHHHHTCEECCHHHHTTHHH
T ss_pred -----CCEEEChHHHhccCCcEeeccchHHHhCHHHHHhCCCcEEEeCCCCCcccHHHHHHHHhCCCEEecceeecCCce
Confidence 2456677889999999999999999999999999999999999999986 5999999999999999999999999
Q ss_pred eehhHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHcCC
Q 015287 342 TVSYFEWVQNIQGFMWEEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGVNRVAQATLLRGW 409 (410)
Q Consensus 342 i~s~~E~~qn~~~~~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~~ri~~a~~~rg~ 409 (410)
++||||| +.|++|+|+++|+++| +++++|++.++++++++|+|||.+|++||+++++.|||
T Consensus 292 ~~s~~E~------~~~~~e~v~~~l~~i~-~~~~~i~~~~~~~~~~~~~aA~~~a~~ri~~a~~~~~~ 352 (364)
T 1leh_A 292 INVADEL------YGYNRTRAMKRVDGIY-DSIEKIFAISKRDGVPSYVAADRMAEERIAKVAKARSQ 352 (364)
T ss_dssp HHHHHGG------GCCCHHHHHHHHTHHH-HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEEEee------cCCCHHHHHHHHHHHH-HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999 5799999999999987 89999999999999999999999999999999999995
No 15
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.19 E-value=3.3e-06 Score=83.63 Aligned_cols=171 Identities=16% Similarity=0.161 Sum_probs=104.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHC-------CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEH-------GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDL 277 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~-------GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~l 277 (410)
+-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++...++++ +|++...+.+++.+.+..+ ..+.+++
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~-idl~~~~~~~~~~g~~~~~----~~d~~e~ 77 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN-LDISSIISNKEKTGRISDR----AFSGPED 77 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS-CCHHHHHHHHHHHSCSCSS----BCCSGGG
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc-cCHHHHHHHhhhcCCCCcc----cCCHHHH
Confidence 446899999999999999999763 679999999999999998 9998887766654544322 1245566
Q ss_pred c-ccccceEeecccCCccc---cccccc-c--cceEEEecCCC-CCCHHH---HHHHHhCCceEeccccccccC---cee
Q 015287 278 L-VHECDVLVPCALGGVLN---KENAAD-V--KAKFIIEAANH-PTDPEA---DEILSKKGVVILPDIYANSGG---VTV 343 (410)
Q Consensus 278 l-~~~~DvliPaA~~~~I~---~~na~~-i--~akiIvEgAN~-p~t~~A---~~iL~~rGI~v~PD~laNaGG---Vi~ 343 (410)
+ +.++||++.|.-..... .+.+.. + +..+|++ |- +++.+. .+..+++|+.+.=. ++.|| ++.
T Consensus 78 l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta--NK~~la~~~~eL~~lA~~~g~~~~~E--a~vg~giPii~ 153 (325)
T 3ing_A 78 LMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA--NKSGLANKWHDIMDSANQNSKYIRYE--ATVAGGVPLFS 153 (325)
T ss_dssp GTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEECG--GGSSTTSCCHH
T ss_pred hcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEc--CchhHHHHHHHHHHHHHHcCCeEEEE--eeecccCHHHH
Confidence 5 45899999998654221 122222 2 4456653 22 222333 34456788865422 33332 222
Q ss_pred hhHHHhhhc-----ccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 015287 344 SYFEWVQNI-----QGF-MWEEEKVNHELKRYMMSAFKDIKTMCQTHNC 386 (410)
Q Consensus 344 s~~E~~qn~-----~~~-~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~ 386 (410)
.-.|++..- .+. .=+-.-+..++++ ...|.+++..|++.|.
T Consensus 154 ~l~~~l~g~~I~~i~Gi~nGT~nyil~~m~~--g~~f~~~l~~Aq~~Gy 200 (325)
T 3ing_A 154 VLDYSILPSKVKRFRGIVSSTINYVIRNMAN--GRSLRDVVDDAIKKGI 200 (325)
T ss_dssp HHHHTCTTCCEEEEEEECCHHHHHHHHHHHT--TCCHHHHHHHHHHHTC
T ss_pred HHHHHhhCCCeeEEEEEEEeeeeEEeecccC--CCCHHHHHHHHHHcCC
Confidence 333333210 000 0023445555533 4589999999999886
No 16
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.97 E-value=8.1e-05 Score=75.13 Aligned_cols=156 Identities=20% Similarity=0.311 Sum_probs=106.3
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhhhCCCCceecCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChH
Q 015287 138 VPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNV 217 (410)
Q Consensus 138 ipapDvgt~~~~m~wi~d~~~~~~g~~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnV 217 (410)
|-....|++.-++++..+. |- .++.-| | ....+++-.++..+..+.++++.++.|+||.|+|+|++
T Consensus 62 I~~~~~G~D~iD~~~~~~~-----gI---~v~n~p----g--~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~I 127 (380)
T 2o4c_A 62 VGTCTIGTDHLDLDYFAEA-----GI---AWSSAP----G--CNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQV 127 (380)
T ss_dssp EEECSSCSTTBCHHHHHHH-----TC---EEECCT----T--TTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHH
T ss_pred EEEcCcccchhhHHHHHhC-----CC---EEEeCC----C--cChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHH
Confidence 5566778877777766432 21 234333 1 12457788888888888888899999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEeecc--------
Q 015287 218 GSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLVPCA-------- 289 (410)
Q Consensus 218 G~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~DvliPaA-------- 289 (410)
|+.+|+.|...|.+|+ +.|.+. +. ... +....+.++++. +|||++.|.
T Consensus 128 G~~vA~~l~~~G~~V~-~~d~~~----------~~-----~~~-------g~~~~~l~ell~-~aDvV~l~~Plt~~g~~ 183 (380)
T 2o4c_A 128 GGRLVEVLRGLGWKVL-VCDPPR----------QA-----REP-------DGEFVSLERLLA-EADVISLHTPLNRDGEH 183 (380)
T ss_dssp HHHHHHHHHHTTCEEE-EECHHH----------HH-----HST-------TSCCCCHHHHHH-HCSEEEECCCCCSSSSS
T ss_pred HHHHHHHHHHCCCEEE-EEcCCh----------hh-----hcc-------CcccCCHHHHHH-hCCEEEEeccCcccccc
Confidence 9999999999999998 444310 10 010 111223345554 899999986
Q ss_pred -cCCcccccccccccc-eEEEecCCCCC-CHH-HHHHHHhCCceEe
Q 015287 290 -LGGVLNKENAADVKA-KFIIEAANHPT-DPE-ADEILSKKGVVIL 331 (410)
Q Consensus 290 -~~~~I~~~na~~i~a-kiIvEgAN~p~-t~~-A~~iL~~rGI~v~ 331 (410)
..+.|+++....++. .+++..+.+++ +.+ ..+.|++++|.-+
T Consensus 184 ~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A 229 (380)
T 2o4c_A 184 PTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEV 229 (380)
T ss_dssp CCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEE
T ss_pred chhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceE
Confidence 445677666666654 58899998884 544 4578888887644
No 17
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.75 E-value=8.2e-05 Score=73.61 Aligned_cols=169 Identities=19% Similarity=0.243 Sum_probs=97.6
Q ss_pred CeEEEEccChHHHHHHHHHHHC---------CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH---------GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDL 277 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~---------GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~l 277 (410)
.+|+|.|+|+||+.+++.|.+. +.+|++|+|++....++ +|+.+..+.+.....+.. ..+.+++
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~--id~~~~~~~~~~~~~~~~-----~~d~~~l 75 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD--FSLVEALRMKRETGMLRD-----DAKAIEV 75 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS--CCHHHHHHHHHHHSSCSB-----CCCHHHH
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc--cCHHHHHhhhccCccccC-----CCCHHHH
Confidence 5899999999999999999764 78999999999988887 888766554332222211 1234566
Q ss_pred cc-cccceEeecccCCcccc---cccc---cccceEEEecCCCCCC---HHHHHHHHhCCceEeccccccccCce---eh
Q 015287 278 LV-HECDVLVPCALGGVLNK---ENAA---DVKAKFIIEAANHPTD---PEADEILSKKGVVILPDIYANSGGVT---VS 344 (410)
Q Consensus 278 l~-~~~DvliPaA~~~~I~~---~na~---~i~akiIvEgAN~p~t---~~A~~iL~~rGI~v~PD~laNaGGVi---~s 344 (410)
+. .++|+++.|.-...-+. +.+. +-+..+|+|-- .|++ .+..+..+++|+.+. |-++-|+-+ ..
T Consensus 76 l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NK-kpla~~~~eL~~~A~~~g~~~~--~ea~v~~g~Pii~~ 152 (327)
T 3do5_A 76 VRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNK-GPLVAEFHGLMSLAERNGVRLM--YEATVGGAMPVVKL 152 (327)
T ss_dssp HHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCS-HHHHHHHHHHHHHHHHTTCCEE--CGGGSSTTSCCHHH
T ss_pred hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCc-hhhHHHHHHHHHHHHhhCCcEE--EEEEeeecCHHHHH
Confidence 64 57999999974332211 1111 12556787711 1333 333455678898665 234433322 22
Q ss_pred hHHHhhh-----cccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 015287 345 YFEWVQN-----IQGF-MWEEEKVNHELKRYMMSAFKDIKTMCQTHNC 386 (410)
Q Consensus 345 ~~E~~qn-----~~~~-~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~ 386 (410)
-.|++.+ +.+. .=+-.-+..++.+. ...|++++..|++.|.
T Consensus 153 l~~~l~~~~I~~I~GIlnGT~nyilt~m~~~-g~~f~~~l~~Aq~~Gy 199 (327)
T 3do5_A 153 AKRYLALCEIESVKGIFNGTCNYILSRMEEE-RLPYEHILKEAQELGY 199 (327)
T ss_dssp HHTTTTTSCEEEEEEECCHHHHHHHHHHHHH-CCCHHHHHHHHHHTTS
T ss_pred HHHHhhCCCccEEEEEECCCcCcchhhcCcC-CcCHHHHHHHHHHcCC
Confidence 2232221 0000 00123344444321 4579999999999885
No 18
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.74 E-value=0.00013 Score=75.02 Aligned_cols=108 Identities=16% Similarity=0.210 Sum_probs=71.8
Q ss_pred HHHHHHHHHHH-HHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCccc
Q 015287 187 LGVFFATEALL-AEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLND 265 (410)
Q Consensus 187 ~Gv~~~~~~~~-~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~ 265 (410)
||...++-..+ +..+..+.|++|.|+|+|++|+.+|+.|...|++|+ ++|.+ +....+....
T Consensus 227 yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Vi-v~d~d----------p~~a~~A~~~------ 289 (464)
T 3n58_A 227 YGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVK-VTEVD----------PICALQAAMD------ 289 (464)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS----------HHHHHHHHHT------
T ss_pred hcchHHHHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC----------cchhhHHHhc------
Confidence 34433333333 356888999999999999999999999999999998 67653 2222222211
Q ss_pred CCCCeeecCCcccccccceEeeccc-CCcccccccccccc-eEEEecCCCC
Q 015287 266 FQGGNAMDLNDLLVHECDVLVPCAL-GGVLNKENAADVKA-KFIIEAANHP 314 (410)
Q Consensus 266 ~~~~~~i~~~~ll~~~~DvliPaA~-~~~I~~~na~~i~a-kiIvEgAN~p 314 (410)
+.+..+.++++. .+||++.|.- .+.|+.+.....+- -+|+-.+.+.
T Consensus 290 --G~~vv~LeElL~-~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 290 --GFEVVTLDDAAS-TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp --TCEECCHHHHGG-GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred --CceeccHHHHHh-hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 122333455553 7999999863 46788777776643 4666666665
No 19
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.72 E-value=0.00056 Score=64.71 Aligned_cols=133 Identities=17% Similarity=0.135 Sum_probs=82.4
Q ss_pred HHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecC
Q 015287 195 ALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDL 274 (410)
Q Consensus 195 ~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~ 274 (410)
.++++.+.+++| ++.|.|.|++|+.+++.|.+.|++|+ |+|.+ .+...+..++.+. ..-+.
T Consensus 106 ~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~-v~~r~----------~~~~~~l~~~~~~-------~~~~~ 166 (263)
T 2d5c_A 106 EALKAGGIPLKG-PALVLGAGGAGRAVAFALREAGLEVW-VWNRT----------PQRALALAEEFGL-------RAVPL 166 (263)
T ss_dssp HHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEE-EECSS----------HHHHHHHHHHHTC-------EECCG
T ss_pred HHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEE-EEECC----------HHHHHHHHHHhcc-------chhhH
Confidence 335566788999 99999999999999999999999654 77764 3333333332121 11122
Q ss_pred CcccccccceEeecccCCcccc--c--cccccc-ceEEEecCCCCCCHHHHHHHHhCCceEeccccccccCceehhHHH
Q 015287 275 NDLLVHECDVLVPCALGGVLNK--E--NAADVK-AKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEW 348 (410)
Q Consensus 275 ~~ll~~~~DvliPaA~~~~I~~--~--na~~i~-akiIvEgAN~p~t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~ 348 (410)
+++ .++||+|-|.-.+.... . ....++ -++|++-+.+|...+..+.++++|+.++|..-.-.+..+.++..|
T Consensus 167 ~~~--~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~~v~g~~mlv~q~~~a~~~w 243 (263)
T 2d5c_A 167 EKA--REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLW 243 (263)
T ss_dssp GGG--GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHHHHHHHHHHHH
T ss_pred hhc--cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCEEECcHHHHHHHHHHHHHHH
Confidence 344 68999998875442110 1 123343 357889887775224667788899998876433333333344444
No 20
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.65 E-value=0.00032 Score=71.85 Aligned_cols=98 Identities=17% Similarity=0.308 Sum_probs=70.1
Q ss_pred HHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcc
Q 015287 198 AEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDL 277 (410)
Q Consensus 198 ~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~l 277 (410)
+..+..+.|++|+|.|+|++|+.+|+.|...|++|+ +.|.+ .......... +....+.+++
T Consensus 203 ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Vi-v~D~~----------p~~a~~A~~~--------G~~~~sL~ea 263 (436)
T 3h9u_A 203 RATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVV-VTEVD----------PINALQAAME--------GYQVLLVEDV 263 (436)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHHT--------TCEECCHHHH
T ss_pred HhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECCC----------hhhhHHHHHh--------CCeecCHHHH
Confidence 356888999999999999999999999999999988 67763 2222222221 1122334455
Q ss_pred cccccceEeeccc-CCcccccccccccc-eEEEecCCCCC
Q 015287 278 LVHECDVLVPCAL-GGVLNKENAADVKA-KFIIEAANHPT 315 (410)
Q Consensus 278 l~~~~DvliPaA~-~~~I~~~na~~i~a-kiIvEgAN~p~ 315 (410)
+. .+||++.+.- .+.|+++....++- -+|+..++++.
T Consensus 264 l~-~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 264 VE-EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDT 302 (436)
T ss_dssp TT-TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSGG
T ss_pred Hh-hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCCC
Confidence 53 6999998764 46888888877754 57888888763
No 21
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.64 E-value=0.00035 Score=67.38 Aligned_cols=115 Identities=23% Similarity=0.331 Sum_probs=75.8
Q ss_pred HHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecC-
Q 015287 196 LLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDL- 274 (410)
Q Consensus 196 ~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~- 274 (410)
++...+.++.|++|.|.|+|++|+.+++.|...|++|+ +.|.+ .+.+.... +. +...++.
T Consensus 145 ~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~dr~----------~~~~~~~~-~~-------g~~~~~~~ 205 (293)
T 3d4o_A 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVK-VGARE----------SDLLARIA-EM-------GMEPFHIS 205 (293)
T ss_dssp HHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESS----------HHHHHHHH-HT-------TSEEEEGG
T ss_pred HHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEECC----------HHHHHHHH-HC-------CCeecChh
Confidence 34456778999999999999999999999999999987 56654 22222221 11 1222211
Q ss_pred --CcccccccceEeecccCCccccccccccc-ceEEEecCCCCCCHHHHHHHHhCCceEe
Q 015287 275 --NDLLVHECDVLVPCALGGVLNKENAADVK-AKFIIEAANHPTDPEADEILSKKGVVIL 331 (410)
Q Consensus 275 --~~ll~~~~DvliPaA~~~~I~~~na~~i~-akiIvEgAN~p~t~~A~~iL~~rGI~v~ 331 (410)
++++ .++|+++-|.-.+.++++....++ -.+++.-+-+|..-+. +...++|+.++
T Consensus 206 ~l~~~l-~~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 206 KAAQEL-RDVDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF-RYAEKRGIKAL 263 (293)
T ss_dssp GHHHHT-TTCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH-HHHHHHTCEEE
T ss_pred hHHHHh-cCCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH-HHHHHCCCEEE
Confidence 2333 479999999877777776555554 3477887766642222 55677788764
No 22
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.63 E-value=0.00031 Score=71.92 Aligned_cols=109 Identities=17% Similarity=0.252 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHH-HhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCccc
Q 015287 187 LGVFFATEALLA-EHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLND 265 (410)
Q Consensus 187 ~Gv~~~~~~~~~-~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~ 265 (410)
||...++-..++ ..+..+.|++|+|.|+|++|+.+|+.|...|++|+ +.|.+ .....+....
T Consensus 200 yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Vi-v~D~d----------p~ra~~A~~~------ 262 (435)
T 3gvp_A 200 YCCRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVY-VTEID----------PICALQACMD------ 262 (435)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHHT------
T ss_pred hhhHHHHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEeCC----------hhhhHHHHHc------
Confidence 344333333333 45788999999999999999999999999999988 67764 2222222211
Q ss_pred CCCCeeecCCcccccccceEeeccc-CCcccccccccccc-eEEEecCCCCC
Q 015287 266 FQGGNAMDLNDLLVHECDVLVPCAL-GGVLNKENAADVKA-KFIIEAANHPT 315 (410)
Q Consensus 266 ~~~~~~i~~~~ll~~~~DvliPaA~-~~~I~~~na~~i~a-kiIvEgAN~p~ 315 (410)
+....+-++++. .+||++.|.- .+.|+.+....++- -+|+.-++++.
T Consensus 263 --G~~v~~Leeal~-~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 263 --GFRLVKLNEVIR-QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp --TCEECCHHHHTT-TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred --CCEeccHHHHHh-cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 112223344443 7999999853 56788777776653 47888888764
No 23
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.55 E-value=0.00041 Score=69.98 Aligned_cols=122 Identities=23% Similarity=0.247 Sum_probs=86.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCC---CCHHHHHHHHHhC
Q 015287 184 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNG---IDVPALLKYKKSN 260 (410)
Q Consensus 184 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~G---lDi~~l~~~~~~~ 260 (410)
-|+-=+..++..+++..|.++++.||+|.|.|.+|..+|++|...|++=|-+.|++|.++.... |+. +.+.+.+.
T Consensus 170 GTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~--~k~~~A~~ 247 (388)
T 1vl6_A 170 GTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNE--YHLEIARI 247 (388)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSH--HHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCH--HHHHHHHh
Confidence 3444444556666777788999999999999999999999999999943349999999987543 543 33333222
Q ss_pred CCcccCCCCeeecCCcccc--cccceEeecccCCcccccccccccce-EEEecCCCCC
Q 015287 261 KSLNDFQGGNAMDLNDLLV--HECDVLVPCALGGVLNKENAADVKAK-FIIEAANHPT 315 (410)
Q Consensus 261 g~v~~~~~~~~i~~~~ll~--~~~DvliPaA~~~~I~~~na~~i~ak-iIvEgAN~p~ 315 (410)
.. .+. +..+|.+ ..+||||=++-++.+|++-+++.+-+ +|.+-|| |+
T Consensus 248 ~~--~~~-----~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN-Pt 297 (388)
T 1vl6_A 248 TN--PER-----LSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN-PV 297 (388)
T ss_dssp SC--TTC-----CCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS-SS
T ss_pred hh--ccC-----chhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC-CC
Confidence 11 110 1122222 24799999988999999999887533 9999999 54
No 24
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.53 E-value=0.0028 Score=60.34 Aligned_cols=126 Identities=13% Similarity=0.142 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcc
Q 015287 185 TGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLN 264 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~ 264 (410)
.+.|+..+++ +.+.+++++++.|.|.|.+|+.+++.|.+.|++|+ |+|.+ .+.+.+..++-+..
T Consensus 102 D~~G~~~~L~----~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~-v~~R~----------~~~~~~la~~~~~~- 165 (271)
T 1nyt_A 102 DGVGLLSDLE----RLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVT-ITNRT----------VSRAEELAKLFAHT- 165 (271)
T ss_dssp HHHHHHHHHH----HHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS----------HHHHHHHHHHTGGG-
T ss_pred CHHHHHHHHH----hcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEE-EEECC----------HHHHHHHHHHhhcc-
Confidence 5778777665 45778999999999999999999999999999887 77764 34444443321110
Q ss_pred cCCCCeeecCCcccccccceEeecccCCc------ccccccccccceEEEecCCCCC-CHHHHHHHHhCCce-Ee
Q 015287 265 DFQGGNAMDLNDLLVHECDVLVPCALGGV------LNKENAADVKAKFIIEAANHPT-DPEADEILSKKGVV-IL 331 (410)
Q Consensus 265 ~~~~~~~i~~~~ll~~~~DvliPaA~~~~------I~~~na~~i~akiIvEgAN~p~-t~~A~~iL~~rGI~-v~ 331 (410)
......+.+++.+..+|++|-|+.-.. +..+... ...+|++-.-+|. |+- .+..+++|+. ++
T Consensus 166 --~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~--~~~~v~D~~y~p~~t~~-~~~a~~~G~~~~~ 235 (271)
T 1nyt_A 166 --GSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIH--PGIYCYDMFYQKGKTPF-LAWCEQRGSKRNA 235 (271)
T ss_dssp --SSEEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCC--TTCEEEESCCCSSCCHH-HHHHHHTTCCEEE
T ss_pred --CCeeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcC--CCCEEEEeccCCcCCHH-HHHHHHcCCCeec
Confidence 001111112221147999999885332 2211111 3368888888884 653 4568889987 54
No 25
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.43 E-value=0.00068 Score=65.50 Aligned_cols=116 Identities=20% Similarity=0.349 Sum_probs=77.9
Q ss_pred HHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee---cC
Q 015287 198 AEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM---DL 274 (410)
Q Consensus 198 ~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i---~~ 274 (410)
+..+.++.|++|.|.|+|++|+.+++.|...|++|+ +.|.+ .+.+....+ . +...+ +.
T Consensus 149 ~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~d~~----------~~~~~~~~~-~-------g~~~~~~~~l 209 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVK-VGARS----------SAHLARITE-M-------GLVPFHTDEL 209 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEE-EEESS----------HHHHHHHHH-T-------TCEEEEGGGH
T ss_pred HhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEE-EEECC----------HHHHHHHHH-C-------CCeEEchhhH
Confidence 345778999999999999999999999999999987 55653 223222222 1 11111 12
Q ss_pred CcccccccceEeecccCCccccccccccc-ceEEEecCCCCCCHHHHHHHHhCCceEe--ccc
Q 015287 275 NDLLVHECDVLVPCALGGVLNKENAADVK-AKFIIEAANHPTDPEADEILSKKGVVIL--PDI 334 (410)
Q Consensus 275 ~~ll~~~~DvliPaA~~~~I~~~na~~i~-akiIvEgAN~p~t~~A~~iL~~rGI~v~--PD~ 334 (410)
++++ .++|+++-|.-.+.++++....++ -.+++.-+-+|..-+. +...++|+.++ |+.
T Consensus 210 ~~~l-~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~ 270 (300)
T 2rir_A 210 KEHV-KDIDICINTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF-KYAEKQGIKALLAPGL 270 (300)
T ss_dssp HHHS-TTCSEEEECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCH
T ss_pred HHHh-hCCCEEEECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH-HHHHHCCCEEEECCCC
Confidence 2333 479999999877888876655554 3578888877743223 55677898764 654
No 26
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.41 E-value=0.004 Score=62.05 Aligned_cols=115 Identities=20% Similarity=0.317 Sum_probs=77.4
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~ 279 (410)
+.++.|+||.|.|+|++|+.+|+.|...|++|+ +.|. ...+.+...+. +.... +.++++
T Consensus 159 ~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~-~~dr-------~~~~~~~~~~~-----------g~~~~~~l~ell- 218 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLL-YHDR-------LQMAPELEKET-----------GAKFVEDLNEML- 218 (351)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEE-EECS-------SCCCHHHHHHH-----------CCEECSCHHHHG-
T ss_pred cccccCCEEeEEEeCHHHHHHHHHHHHCCCEEE-EeCC-------CccCHHHHHhC-----------CCeEcCCHHHHH-
Confidence 456999999999999999999999999999987 4444 33333332221 11222 234444
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHHH-HHHHHhCCce-Eecccc
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPEA-DEILSKKGVV-ILPDIY 335 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~A-~~iL~~rGI~-v~PD~l 335 (410)
.+||+++-|.- .+.|+++....++ -.+++.-|.+++ +.+| .+.|++..|. ..=|+.
T Consensus 219 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~ 283 (351)
T 3jtm_A 219 PKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVW 283 (351)
T ss_dssp GGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred hcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCC
Confidence 47999998763 3466666666554 468999999984 4444 5789888876 333443
No 27
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.40 E-value=0.00045 Score=69.70 Aligned_cols=172 Identities=20% Similarity=0.219 Sum_probs=102.4
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCC
Q 015287 183 AATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKS 262 (410)
Q Consensus 183 ~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~ 262 (410)
.+++--++..+-.+.+..|.++.|+||.|+|+|++|+.+|+.|...|.+|++ .|.. .....
T Consensus 96 ~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~-~d~~-----------------~~~~~- 156 (381)
T 3oet_A 96 IAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLL-CDPP-----------------RAARG- 156 (381)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECHH-----------------HHHTT-
T ss_pred chhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEE-ECCC-----------------hHHhc-
Confidence 4566666666666777888999999999999999999999999999999984 3431 00000
Q ss_pred cccCCCCeeecCCcccccccceEeecc---------cCCccccccccccc-ceEEEecCCCCC-CHHH-HHHHHhCCce-
Q 015287 263 LNDFQGGNAMDLNDLLVHECDVLVPCA---------LGGVLNKENAADVK-AKFIIEAANHPT-DPEA-DEILSKKGVV- 329 (410)
Q Consensus 263 v~~~~~~~~i~~~~ll~~~~DvliPaA---------~~~~I~~~na~~i~-akiIvEgAN~p~-t~~A-~~iL~~rGI~- 329 (410)
.+....+.++++ .+|||++-|. ..+.|+++....++ -.+++..+-+++ +.+| .+.|++.+|.
T Consensus 157 ----~~~~~~sl~ell-~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~g 231 (381)
T 3oet_A 157 ----DEGDFRTLDELV-QEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLS 231 (381)
T ss_dssp ----CCSCBCCHHHHH-HHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEE
T ss_pred ----cCcccCCHHHHH-hhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeE
Confidence 011122334444 3789988776 34466666655554 358889998884 4444 4778888775
Q ss_pred EeccccccccCceehhHHHh-hhcccCCCCHHHHHHHHHHHHHHHHHHHH
Q 015287 330 ILPDIYANSGGVTVSYFEWV-QNIQGFMWEEEKVNHELKRYMMSAFKDIK 378 (410)
Q Consensus 330 v~PD~laNaGGVi~s~~E~~-qn~~~~~w~~~~v~~~l~~~m~~~~~~v~ 378 (410)
..=|+..+=--.-.+.++.. --..|..|.-.+...+....+.+++.+.+
T Consensus 232 A~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l 281 (381)
T 3oet_A 232 VVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFI 281 (381)
T ss_dssp EEESCCTTTTSCCHHHHHHSSEECSSCTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEeeccccCCCCcchhhhCCEEECCccCcCcHHHHHHHHHHHHHHHHHHH
Confidence 34454443332211211110 00124444434444445444445555444
No 28
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.39 E-value=0.0013 Score=65.05 Aligned_cols=109 Identities=16% Similarity=0.246 Sum_probs=74.4
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
|.++.|+||.|+|+|++|+.+|+.|...|++|+ +.|.+ ..+.+...+. +....+.++++ .
T Consensus 140 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~-~~d~~-------~~~~~~~~~~-----------g~~~~~l~ell-~ 199 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAIGLAMADRLQGWGATLQ-YHEAK-------ALDTQTEQRL-----------GLRQVACSELF-A 199 (330)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEE-EECSS-------CCCHHHHHHH-----------TEEECCHHHHH-H
T ss_pred CCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECCC-------CCcHhHHHhc-----------CceeCCHHHHH-h
Confidence 345899999999999999999999999999988 44543 2233222111 11222334555 3
Q ss_pred ccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 281 ECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
.||+++-|.- .+.|+++....++ -.+++..+.+++ +.+ ..+.|++.+|.
T Consensus 200 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 200 SSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCcc
Confidence 7999998763 4566666666664 458899999884 444 45788888876
No 29
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.37 E-value=0.0021 Score=63.81 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=74.2
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHH-HCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFH-EHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLL 278 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~-~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll 278 (410)
+.++.|++|.|+|+|++|+.+|+.|. ..|.+|+ +.|.+. -..+...+ . +.... +.++++
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~-~~d~~~-------~~~~~~~~---~--------g~~~~~~l~ell 218 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLV-YYDVAP-------ADAETEKA---L--------GAERVDSLEELA 218 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECSSC-------CCHHHHHH---H--------TCEECSSHHHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEE-EECCCC-------cchhhHhh---c--------CcEEeCCHHHHh
Confidence 46799999999999999999999999 9999988 555432 12222211 1 11222 223444
Q ss_pred ccccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce-Eeccccc
Q 015287 279 VHECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DP-EADEILSKKGVV-ILPDIYA 336 (410)
Q Consensus 279 ~~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~-~A~~iL~~rGI~-v~PD~la 336 (410)
.+||+++.|.- .+.|+++....++ -.+|+.-+.+++ +. +..+.|.+..|. ..-|+..
T Consensus 219 -~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 284 (348)
T 2w2k_A 219 -RRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHE 284 (348)
T ss_dssp -HHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCT
T ss_pred -ccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCC
Confidence 38999999874 3455555555554 347788888874 44 445778876654 3445543
No 30
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.36 E-value=0.0019 Score=64.53 Aligned_cols=115 Identities=17% Similarity=0.232 Sum_probs=75.7
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCE-EEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGK-VVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLL 278 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~Gak-vVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll 278 (410)
+.++.|++|.|+|+|++|+.+|+.|...|++ |+ +.|.+ ....+... +.+ .... +.++++
T Consensus 159 ~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~-~~d~~-------~~~~~~~~----~~g-------~~~~~~l~ell 219 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRIGYRVLERLVPFNPKELL-YYDYQ-------ALPKDAEE----KVG-------ARRVENIEELV 219 (364)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEE-EECSS-------CCCHHHHH----HTT-------EEECSSHHHHH
T ss_pred cccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEE-EECCC-------ccchhHHH----hcC-------cEecCCHHHHH
Confidence 4579999999999999999999999999997 87 44543 22222211 111 1111 234444
Q ss_pred ccccceEeecccC-----Cccccccccccc-ceEEEecCCCC-CCHH-HHHHHHhCCce-Eecccc
Q 015287 279 VHECDVLVPCALG-----GVLNKENAADVK-AKFIIEAANHP-TDPE-ADEILSKKGVV-ILPDIY 335 (410)
Q Consensus 279 ~~~~DvliPaA~~-----~~I~~~na~~i~-akiIvEgAN~p-~t~~-A~~iL~~rGI~-v~PD~l 335 (410)
. +||+++.|.-. +.|+++....++ -.+++.-+.++ ++.+ ..+.|++.+|. ..=|++
T Consensus 220 ~-~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf 284 (364)
T 2j6i_A 220 A-QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVW 284 (364)
T ss_dssp H-TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred h-cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecC
Confidence 3 89999988743 466665555564 35788888887 4544 45789888876 333443
No 31
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.36 E-value=0.0051 Score=60.12 Aligned_cols=108 Identities=19% Similarity=0.272 Sum_probs=71.3
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
+.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+. +... ..+.+ ....+.++++ .
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~~--------~~~~----~~~~g-------~~~~~l~ell-~ 195 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRIGTKVGIIANAMGMKVL-AYDILD--------IREK----AEKIN-------AKAVSLEELL-K 195 (313)
T ss_dssp CCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEE-EECSSC--------CHHH----HHHTT-------CEECCHHHHH-H
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECCCc--------chhH----HHhcC-------ceecCHHHHH-h
Confidence 456999999999999999999999999999998 555532 1111 11111 1222334544 3
Q ss_pred ccceEeeccc-----CCccccccccccc-ceEEEecCCCC-CCHH-HHHHHHhCCce
Q 015287 281 ECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHP-TDPE-ADEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p-~t~~-A~~iL~~rGI~ 329 (410)
+||+++.|.- .+.|+++....++ -.+++.-+-++ ++.+ ..+.|++.+|.
T Consensus 196 ~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ 252 (313)
T 2ekl_A 196 NSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVY 252 (313)
T ss_dssp HCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEE
T ss_pred hCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCc
Confidence 7999998863 3456555555554 35788888777 4544 35778887764
No 32
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.33 E-value=0.00047 Score=69.76 Aligned_cols=122 Identities=23% Similarity=0.212 Sum_probs=84.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCC--CCCHHHHHHHHHhC
Q 015287 184 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPN--GIDVPALLKYKKSN 260 (410)
Q Consensus 184 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~--GlDi~~l~~~~~~~ 260 (410)
-|+-=+..++-.+++-.|.+++..||+|.|.|.+|.++|++|...|+ +|+ +.|++|.++... .|+. +.+.+.+.
T Consensus 166 GTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~-v~D~~Gli~~~R~~~L~~--~k~~fa~~ 242 (398)
T 2a9f_A 166 GTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVT-VVDKFGIINEQEAAQLAP--HHLDIAKV 242 (398)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEE-EEETTEECCTTCCCSCCC-----CHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEE-EEECCCcccCCccccchH--HHHHHhhc
Confidence 34444445556666767888999999999999999999999999999 665 999999998643 3542 22222111
Q ss_pred CCcccCCCCeeecCCcccccccceEeecccCCcccccccccccc-eEEEecCCC
Q 015287 261 KSLNDFQGGNAMDLNDLLVHECDVLVPCALGGVLNKENAADVKA-KFIIEAANH 313 (410)
Q Consensus 261 g~v~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~na~~i~a-kiIvEgAN~ 313 (410)
.. .+ ...-+-.|.+. .+||||=++-++.+|++-+++.+- .+|.--||-
T Consensus 243 ~~--~~--~~~~~L~eav~-~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNP 291 (398)
T 2a9f_A 243 TN--RE--FKSGTLEDALE-GADIFIGVSAPGVLKAEWISKMAARPVIFAMANP 291 (398)
T ss_dssp HS--CT--TCCCSCSHHHH-TTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSS
T ss_pred cC--cc--cchhhHHHHhc-cCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCC
Confidence 00 01 11112233333 479999998899999999988754 488888983
No 33
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.30 E-value=0.004 Score=59.43 Aligned_cols=141 Identities=12% Similarity=0.124 Sum_probs=86.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCc
Q 015287 184 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSL 263 (410)
Q Consensus 184 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v 263 (410)
.++.|+..+++ +.+.++++++|.|.|.|.+|+.+++.|.+.|++|+ |.|.+ .+.+.+..++.+
T Consensus 111 Td~~G~~~~l~----~~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~-v~~r~----------~~~~~~l~~~~g-- 173 (275)
T 2hk9_A 111 TDWIGFLKSLK----SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVF-LWNRT----------KEKAIKLAQKFP-- 173 (275)
T ss_dssp CHHHHHHHHHH----HHCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEE-EECSS----------HHHHHHHTTTSC--
T ss_pred CCHHHHHHHHH----HhCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEE-EEECC----------HHHHHHHHHHcC--
Confidence 35777777664 45778899999999999999999999999999665 77764 334433332211
Q ss_pred ccCCCCeee-cCCcccccccceEeecccCCcccc--cc--ccccc-ceEEEecCCCCCCHHHHHHHHhCCceEecccccc
Q 015287 264 NDFQGGNAM-DLNDLLVHECDVLVPCALGGVLNK--EN--AADVK-AKFIIEAANHPTDPEADEILSKKGVVILPDIYAN 337 (410)
Q Consensus 264 ~~~~~~~~i-~~~~ll~~~~DvliPaA~~~~I~~--~n--a~~i~-akiIvEgAN~p~t~~A~~iL~~rGI~v~PD~laN 337 (410)
.... +..+.+ .++|++|-|.-.+.... .. ...++ -++|++-+. ..|+ ..+..+++|+.++|..-.-
T Consensus 174 -----~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~-~~t~-ll~~a~~~g~~~v~g~~ml 245 (275)
T 2hk9_A 174 -----LEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY-KETK-LLKKAKEKGAKLLDGLPML 245 (275)
T ss_dssp -----EEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS-SCCH-HHHHHHHTTCEEECSHHHH
T ss_pred -----CeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC-ChHH-HHHHHHHCcCEEECCHHHH
Confidence 1112 223333 48999998875443210 11 12233 358888888 4444 3445667999988764333
Q ss_pred ccCceehhHHHh
Q 015287 338 SGGVTVSYFEWV 349 (410)
Q Consensus 338 aGGVi~s~~E~~ 349 (410)
.+.-+.++..|.
T Consensus 246 v~q~~~a~~~w~ 257 (275)
T 2hk9_A 246 LWQGIEAFKIWN 257 (275)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333334444443
No 34
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.29 E-value=0.0035 Score=60.83 Aligned_cols=53 Identities=17% Similarity=0.110 Sum_probs=45.1
Q ss_pred CchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccCh-HHHHHHHHHHHCCCEEEEEECCC
Q 015287 182 EAATGLGVFFATEALLAEHGKSISNMKFAIQGFGN-VGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 182 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+.|..|+... +++.+.+++|++++|.|.|+ ||+.+|++|...|++|. +++++
T Consensus 139 ~PcTp~gi~~l----l~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~hs~ 192 (288)
T 1b0a_A 139 RPCTPRGIVTL----LERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTT-VTHRF 192 (288)
T ss_dssp CCHHHHHHHHH----HHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEE-EECSS
T ss_pred CCCcHHHHHHH----HHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEE-EEeCC
Confidence 57899986554 55678999999999999997 79999999999999987 77753
No 35
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.28 E-value=0.00025 Score=70.10 Aligned_cols=173 Identities=17% Similarity=0.175 Sum_probs=99.2
Q ss_pred CCeEEEEccChHHHHHHHHHHHC--------CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEH--------GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDL 277 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~--------GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~l 277 (410)
-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++.....+. +|.+.+.+.+.. +.+..+.. ...+.+++
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~-~~~d~~~l 82 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER-IDIGKVISYKEK-GSLDSLEY-ESISASEA 82 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT-CCHHHHHHHHHT-TCGGGCCS-EECCHHHH
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc-cChHHHhhhhcc-CCcccccC-CCCCHHHH
Confidence 36899999999999999999764 479999999988777655 776665544332 22221211 01234566
Q ss_pred cccccceEeecccCC---ccccccccc-c--cceEEEecCCC-CCCHHHH---HHHHhCCceEecccccccc-CceehhH
Q 015287 278 LVHECDVLVPCALGG---VLNKENAAD-V--KAKFIIEAANH-PTDPEAD---EILSKKGVVILPDIYANSG-GVTVSYF 346 (410)
Q Consensus 278 l~~~~DvliPaA~~~---~I~~~na~~-i--~akiIvEgAN~-p~t~~A~---~iL~~rGI~v~PD~laNaG-GVi~s~~ 346 (410)
+..++|+++.|.-.+ ..+.+.+.+ + +..+|++ |- |+..+++ +.-+++|+.+.=+...-.| .++...-
T Consensus 83 l~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvta--nK~pla~~~~eL~~~A~~~gv~~~~ea~vg~giPii~~l~ 160 (331)
T 3c8m_A 83 LARDFDIVVDATPASADGKKELAFYKETFENGKDVVTA--NKSGLANFWPEIMEYARSNNRRIRYEATVAGGVPLFSFID 160 (331)
T ss_dssp HHSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHHH
T ss_pred hCCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEec--CchhhHHHHHHHHHHHHHcCCEEEEEeecccccHHHHHHH
Confidence 656899999998654 122222222 2 4457763 32 2333343 4456789876533222222 3334444
Q ss_pred HHhhhc-----ccCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 015287 347 EWVQNI-----QGFMW--EEEKVNHELKRYMMSAFKDIKTMCQTHNC 386 (410)
Q Consensus 347 E~~qn~-----~~~~w--~~~~v~~~l~~~m~~~~~~v~~~a~~~~~ 386 (410)
+++..- .+ -+ +-.-+..++++ ...|.+++..|++.|.
T Consensus 161 ~~l~g~~I~~I~G-I~nGT~nyil~~m~~--g~~f~~~l~eAq~~Gy 204 (331)
T 3c8m_A 161 YSVLPSRIKKFRG-IVSLTINYFIRELAN--KREFDDVLSEATKLGI 204 (331)
T ss_dssp HHSTTCCCCEEEE-ECCHHHHHHHHHHHT--TCCHHHHHHHHHHHTS
T ss_pred HHhhcCcccEEEE-EEeccceeEecchhc--CCCHHHHHHHHHHcCC
Confidence 444310 01 01 12333444432 3478888999988774
No 36
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.20 E-value=0.0056 Score=59.29 Aligned_cols=129 Identities=12% Similarity=0.137 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHHHhC-CCCCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCCCCCHHHHHHHHHhCCC
Q 015287 185 TGLGVFFATEALLAEHG-KSISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPNGIDVPALLKYKKSNKS 262 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~~~g-~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~ 262 (410)
.+.|+..+++ ..+ .+++++++.|.|.|.+|+.++..|.+.|+ +|+ |.+.+ .+.+.+..++-+.
T Consensus 123 d~~G~~~~l~----~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~-v~nR~----------~~ka~~la~~~~~ 187 (297)
T 2egg_A 123 DGLGYVQALE----EEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERID-MANRT----------VEKAERLVREGDE 187 (297)
T ss_dssp HHHHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEE-EECSS----------HHHHHHHHHHSCS
T ss_pred CHHHHHHHHH----HhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEE-EEeCC----------HHHHHHHHHHhhh
Confidence 3456655554 456 77899999999999999999999999998 665 77764 3444444443221
Q ss_pred cccCCCCeeecCCccc--ccccceEeecccCCccccc-----ccccc-cceEEEecCCCCC-CHHHHHHHHhCCceEecc
Q 015287 263 LNDFQGGNAMDLNDLL--VHECDVLVPCALGGVLNKE-----NAADV-KAKFIIEAANHPT-DPEADEILSKKGVVILPD 333 (410)
Q Consensus 263 v~~~~~~~~i~~~~ll--~~~~DvliPaA~~~~I~~~-----na~~i-~akiIvEgAN~p~-t~~A~~iL~~rGI~v~PD 333 (410)
. +. ...+.+++- -.++||+|-|.--+..... ....+ .-.+|++-.-+|. |+ -.+..+++|+.+++.
T Consensus 188 ~--~~--~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T~-ll~~A~~~G~~~v~G 262 (297)
T 2egg_A 188 R--RS--AYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETK-WLKEAKARGARVQNG 262 (297)
T ss_dssp S--SC--CEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSCH-HHHHHHHTTCEEECS
T ss_pred c--cC--ceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCCH-HHHHHHHCcCEEECC
Confidence 0 00 111111221 2479999988753321100 01223 3468899888884 54 556788999988765
No 37
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.20 E-value=0.00061 Score=67.83 Aligned_cols=107 Identities=20% Similarity=0.249 Sum_probs=73.2
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVH 280 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~ 280 (410)
.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+. +. ... ... +.... +.++++.
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~-~~d~~~----~~-----~~~---~~~-------g~~~~~~l~ell~- 222 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVL-FYDPYL----SD-----GVE---RAL-------GLQRVSTLQDLLF- 222 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECTTS----CT-----THH---HHH-------TCEECSSHHHHHH-
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EECCCc----ch-----hhH---hhc-------CCeecCCHHHHHh-
Confidence 36899999999999999999999999999998 455431 11 111 111 11122 3345554
Q ss_pred ccceEeecc-----cCCcccccccccccc-eEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 281 ECDVLVPCA-----LGGVLNKENAADVKA-KFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA-----~~~~I~~~na~~i~a-kiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
+|||++.|. ..+.|+++....++- .+++.-+.+++ +.+ ..+.|++++|.
T Consensus 223 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 279 (347)
T 1mx3_A 223 HSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIR 279 (347)
T ss_dssp HCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred cCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCc
Confidence 799999875 345677666666653 58889898884 544 45789998876
No 38
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.15 E-value=0.012 Score=56.74 Aligned_cols=174 Identities=12% Similarity=0.126 Sum_probs=100.0
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccc
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHE 281 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~ 281 (410)
.+..++|.|+|+|++|+.+|+.|.+.|.+|+ +.|.+ .+.+.+..+. + .... +..+++ .+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~-~~dr~----------~~~~~~~~~~-g-------~~~~~~~~e~~-~~ 65 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVA-IWNRS----------PGKAAALVAA-G-------AHLCESVKAAL-SA 65 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEE-EECSS----------HHHHHHHHHH-T-------CEECSSHHHHH-HH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEE-EEeCC----------HHHHHHHHHC-C-------CeecCCHHHHH-hc
Confidence 4567899999999999999999999999987 56663 3444444333 1 1111 223333 36
Q ss_pred cceEeecccCCc-----cccccccc-ccceEEEecCCCCC--CHHHHHHHHhCCceEecccc------ccccCce--e--
Q 015287 282 CDVLVPCALGGV-----LNKENAAD-VKAKFIIEAANHPT--DPEADEILSKKGVVILPDIY------ANSGGVT--V-- 343 (410)
Q Consensus 282 ~DvliPaA~~~~-----I~~~na~~-i~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~l------aNaGGVi--~-- 343 (410)
||++|-|.-... +.++.... ..-++|+...+... +.+..+.+.++|+.++.--+ +..++.+ +
T Consensus 66 aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg 145 (306)
T 3l6d_A 66 SPATIFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTG 145 (306)
T ss_dssp SSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEE
T ss_pred CCEEEEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcC
Confidence 999998864332 22111111 24467887777654 23455778999998875322 2222221 1
Q ss_pred --hhHHHhhh----c-ccCCCC--HHH-----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 015287 344 --SYFEWVQN----I-QGFMWE--EEK-----VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLG 396 (410)
Q Consensus 344 --s~~E~~qn----~-~~~~w~--~~~-----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A 396 (410)
..+|.++. + ....+- .+. ..+.+...+...+.+.+..+++.|+++.+...++.
T Consensus 146 ~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~ 212 (306)
T 3l6d_A 146 DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLLL 212 (306)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 22333322 2 112233 221 11122233346777788889999999887665543
No 39
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.14 E-value=0.0034 Score=61.89 Aligned_cols=107 Identities=21% Similarity=0.312 Sum_probs=70.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+. +.+... +.+ ....+.++++ .+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~d~~~--------~~~~~~----~~g-------~~~~~l~e~l-~~ 200 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLY-YWSRHR--------KVNVEK----ELK-------ARYMDIDELL-EK 200 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECSSC--------CHHHHH----HHT-------EEECCHHHHH-HH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCCc--------chhhhh----hcC-------ceecCHHHHH-hh
Confidence 56999999999999999999999999999987 556542 111111 111 1112223444 38
Q ss_pred cceEeecccCC-----cccccccccccceEEEecCCCCC-CHHH-HHHHHhCCce
Q 015287 282 CDVLVPCALGG-----VLNKENAADVKAKFIIEAANHPT-DPEA-DEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA~~~-----~I~~~na~~i~akiIvEgAN~p~-t~~A-~~iL~~rGI~ 329 (410)
||+++.|.-.+ .|+++....++..+++.-+.+++ +.++ .+.|.+..|.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~gilin~srg~~vd~~aL~~aL~~~~i~ 255 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGKYLVNIGRGALVDEKAVTEAIKQGKLK 255 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTCEEEECSCGGGBCHHHHHHHHHTTCBC
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCCEEEECCCCcccCHHHHHHHHHcCCce
Confidence 99999987544 55544444444338889888885 4433 4778877664
No 40
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.11 E-value=0.0042 Score=59.20 Aligned_cols=129 Identities=11% Similarity=0.142 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCccc
Q 015287 186 GLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLND 265 (410)
Q Consensus 186 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~ 265 (410)
+.|+..+++ +.+.+++++++.|.|.|.+|+.++..|.+.|++|+ |.+.+ .+++.+..++-+.
T Consensus 103 ~~G~~~~L~----~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~-v~~R~----------~~~a~~l~~~~~~--- 164 (272)
T 1p77_A 103 GIGLVTDLQ----RLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIV-LANRT----------FSKTKELAERFQP--- 164 (272)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEE-EEESS----------HHHHHHHHHHHGG---
T ss_pred HHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEECC----------HHHHHHHHHHccc---
Confidence 677766654 46778999999999999999999999999998877 77764 3344433332111
Q ss_pred CCCCeeecCCcccccccceEeecccCCcccc-ccc--ccc-cceEEEecCCCC-C-CHHHHHHHHhCCce-Eecc
Q 015287 266 FQGGNAMDLNDLLVHECDVLVPCALGGVLNK-ENA--ADV-KAKFIIEAANHP-T-DPEADEILSKKGVV-ILPD 333 (410)
Q Consensus 266 ~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~-~na--~~i-~akiIvEgAN~p-~-t~~A~~iL~~rGI~-v~PD 333 (410)
+......+.+++...++||+|-|+--+.... ... ..+ ...+|++-.-+| . |+- .+..+++|+. +++.
T Consensus 165 ~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~~t~l-l~~a~~~G~~~~v~G 238 (272)
T 1p77_A 165 YGNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPF-IALCKSLGLTNVSDG 238 (272)
T ss_dssp GSCEEEEEGGGCCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHH-HHHHHHTTCCCEECS
T ss_pred cCCeEEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCcCCHH-HHHHHHcCCCEeeCC
Confidence 0011112222221137999998875332110 001 112 235788888777 3 653 4567888987 6643
No 41
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.11 E-value=0.0053 Score=61.14 Aligned_cols=108 Identities=14% Similarity=0.249 Sum_probs=73.0
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~ 279 (410)
+.++.|+||.|+|+|++|+.+|+.|...|.+|++ .|.+. . . +...+. +.+.. +.++++
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~----------~-~-~~~~~~-------g~~~~~~l~ell- 213 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLV-WGREN----------S-K-ERARAD-------GFAVAESKDALF- 213 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSHH----------H-H-HHHHHT-------TCEECSSHHHHH-
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE-ECCCC----------C-H-HHHHhc-------CceEeCCHHHHH-
Confidence 3468999999999999999999999999999984 44321 1 1 111111 12223 334444
Q ss_pred cccceEeecc-----cCCccccccccccc-ceEEEecCCCCC--CHHHHHHHHhCCce
Q 015287 280 HECDVLVPCA-----LGGVLNKENAADVK-AKFIIEAANHPT--DPEADEILSKKGVV 329 (410)
Q Consensus 280 ~~~DvliPaA-----~~~~I~~~na~~i~-akiIvEgAN~p~--t~~A~~iL~~rGI~ 329 (410)
.+||+++-|. ..+.|+++....++ -.+++..+.+++ +.+..+.|++..|.
T Consensus 214 ~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 271 (352)
T 3gg9_A 214 EQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPG 271 (352)
T ss_dssp HHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSS
T ss_pred hhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCcc
Confidence 4799999876 23456666666554 358899998884 34556889998885
No 42
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.09 E-value=0.0055 Score=59.83 Aligned_cols=96 Identities=17% Similarity=0.170 Sum_probs=68.5
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccCh-HHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHh
Q 015287 181 REAATGLGVFFATEALLAEHGKSISNMKFAIQGFGN-VGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKS 259 (410)
Q Consensus 181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~ 259 (410)
-.+.|..|+.. ++++.+.+++|++++|.|.|+ ||+.+|++|..+|++|. |++++- -|++
T Consensus 144 ~~PcTp~gi~~----ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~hs~t-------~~L~-------- 203 (301)
T 1a4i_A 144 FIPCTPKGCLE----LIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVT-TCHSKT-------AHLD-------- 203 (301)
T ss_dssp CCCHHHHHHHH----HHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTTC-------SSHH--------
T ss_pred ccCchHHHHHH----HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEE-EEECCc-------ccHH--------
Confidence 35789998654 456678999999999999996 89999999999999976 887531 0111
Q ss_pred CCCcccCCCCeeecCCcccccccceEeeccc-CCcccccccccccceEEEecCCCCC
Q 015287 260 NKSLNDFQGGNAMDLNDLLVHECDVLVPCAL-GGVLNKENAADVKAKFIIEAANHPT 315 (410)
Q Consensus 260 ~g~v~~~~~~~~i~~~~ll~~~~DvliPaA~-~~~I~~~na~~i~akiIvEgAN~p~ 315 (410)
+ .-.++||+|-|.. .+.|+.+-++. --+|++-+-++.
T Consensus 204 ----------------~-~~~~ADIVI~Avg~p~~I~~~~vk~--GavVIDVgi~~~ 241 (301)
T 1a4i_A 204 ----------------E-EVNKGDILVVATGQPEMVKGEWIKP--GAIVIDCGINYV 241 (301)
T ss_dssp ----------------H-HHTTCSEEEECCCCTTCBCGGGSCT--TCEEEECCCBC-
T ss_pred ----------------H-HhccCCEEEECCCCcccCCHHHcCC--CcEEEEccCCCc
Confidence 1 1236788888775 45777776542 347777776554
No 43
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.09 E-value=0.0024 Score=63.46 Aligned_cols=115 Identities=22% Similarity=0.308 Sum_probs=76.3
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~ 279 (410)
|.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.+ ..+.+.. . +.... +.++++
T Consensus 168 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~dr~-------~~~~~~~-----~--------g~~~~~~l~ell- 225 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHY-HNRT-------RLSHALE-----E--------GAIYHDTLDSLL- 225 (345)
T ss_dssp BCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEE-ECSS-------CCCHHHH-----T--------TCEECSSHHHHH-
T ss_pred ccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEE-ECCC-------Ccchhhh-----c--------CCeEeCCHHHHH-
Confidence 3568999999999999999999999999999984 4443 2232211 0 12222 334554
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHHH-HHHHHhCCce-Eecccccc
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPEA-DEILSKKGVV-ILPDIYAN 337 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~A-~~iL~~rGI~-v~PD~laN 337 (410)
.+||+++-|.- .+.|+++....++ -.+++.-|.+++ ..+| .+.|++..|. ..=|+..+
T Consensus 226 ~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~ 292 (345)
T 4g2n_A 226 GASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFAN 292 (345)
T ss_dssp HTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTT
T ss_pred hhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCC
Confidence 47999997763 3556666666554 468999999984 5444 4778887775 23444433
No 44
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.07 E-value=0.0032 Score=61.86 Aligned_cols=108 Identities=14% Similarity=0.172 Sum_probs=69.5
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+. + ..+.+ .+. +....+.++++ .+
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~-----~--~~~~~----~~~-------g~~~~~l~e~l-~~ 210 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRF-LYTGRQ-----P--RPEEA----AEF-------QAEFVSTPELA-AQ 210 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEE-EEESSS-----C--CHHHH----HTT-------TCEECCHHHHH-HH
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCC-----c--chhHH----Hhc-------CceeCCHHHHH-hh
Confidence 45889999999999999999999999999987 455431 1 12221 111 12222223444 48
Q ss_pred cceEeecccC-----Cccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce
Q 015287 282 CDVLVPCALG-----GVLNKENAADVK-AKFIIEAANHPT-D-PEADEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA~~-----~~I~~~na~~i~-akiIvEgAN~p~-t-~~A~~iL~~rGI~ 329 (410)
||+++.|.-. +.|+++....++ -.+++.-+.+++ + .+..+.|.+.+|.
T Consensus 211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCcc
Confidence 9999988743 445544444454 357788888863 4 4455778887664
No 45
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.07 E-value=0.0035 Score=62.86 Aligned_cols=114 Identities=22% Similarity=0.292 Sum_probs=74.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|. .. +.+... .. +....+.++++ ..
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~-~~d~-------~~-~~~~~~----~~-------g~~~~~l~ell-~~ 230 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRARIR-VFDP-------WL-PRSMLE----EN-------GVEPASLEDVL-TK 230 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCCEEE-EECS-------SS-CHHHHH----HT-------TCEECCHHHHH-HS
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCCEEE-EECC-------CC-CHHHHh----hc-------CeeeCCHHHHH-hc
Confidence 45889999999999999999999999999998 3443 31 222211 11 12223334554 47
Q ss_pred cceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHHH-HHHHHhCCceEeccccc
Q 015287 282 CDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPEA-DEILSKKGVVILPDIYA 336 (410)
Q Consensus 282 ~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~A-~~iL~~rGI~v~PD~la 336 (410)
||+++-|.- .+.|+++....++ -.+++.-+-+++ +.+| .+.|++..|...=|++.
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~ 293 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYP 293 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCS
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCC
Confidence 999997753 3456666666554 358888888884 4444 57788887764444443
No 46
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.02 E-value=0.0069 Score=59.33 Aligned_cols=107 Identities=18% Similarity=0.198 Sum_probs=70.4
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC-CCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI-TGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV 279 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~-~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~ 279 (410)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|. +. +.... .+. + .... +.++++
T Consensus 142 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~~~--------~~~~~---~~~-g-------~~~~~~l~ell- 200 (320)
T 1gdh_A 142 EKLDNKTLGIYGFGSIGQALAKRAQGFDMDID-YFDTHRA--------SSSDE---ASY-Q-------ATFHDSLDSLL- 200 (320)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSSCC--------CHHHH---HHH-T-------CEECSSHHHHH-
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCCc--------Chhhh---hhc-C-------cEEcCCHHHHH-
Confidence 35899999999999999999999999999998 4554 32 11111 111 1 1222 233444
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCC-CCHH-HHHHHHhCCce
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHP-TDPE-ADEILSKKGVV 329 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p-~t~~-A~~iL~~rGI~ 329 (410)
.+||+++-|.- .+.|+++....++ -.+++.-+.++ ++.+ ..+.|.+.+|.
T Consensus 201 ~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 201 SVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp HHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 37999998863 3456655555554 35788888876 4544 35778887765
No 47
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.02 E-value=0.0054 Score=59.79 Aligned_cols=107 Identities=23% Similarity=0.316 Sum_probs=70.8
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+. +.+. ..+.+ ....+.++++. +
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~~--------~~~~----~~~~g-------~~~~~l~ell~-~ 196 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNIL-LYDPYP--------NEER----AKEVN-------GKFVDLETLLK-E 196 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSC--------CHHH----HHHTT-------CEECCHHHHHH-H
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEE-EECCCC--------Chhh----HhhcC-------ccccCHHHHHh-h
Confidence 46899999999999999999999999999998 555532 1111 11111 12223345553 8
Q ss_pred cceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 282 CDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
||+++.|.- .+.|+++....++ -.+++.-+-+++ +.+ ..+.|.+..|.
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 999998863 3456655555554 357788777774 444 35778887764
No 48
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.01 E-value=0.0097 Score=58.84 Aligned_cols=108 Identities=20% Similarity=0.269 Sum_probs=71.9
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+. +.+. ..+. +....+.++++ .
T Consensus 160 ~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~-~~d~~~--------~~~~----~~~~-------g~~~~~l~ell-~ 218 (335)
T 2g76_A 160 GTELNGKTLGILGLGRIGREVATRMQSFGMKTI-GYDPII--------SPEV----SASF-------GVQQLPLEEIW-P 218 (335)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSSS--------CHHH----HHHT-------TCEECCHHHHG-G
T ss_pred CcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEE-EECCCc--------chhh----hhhc-------CceeCCHHHHH-h
Confidence 356999999999999999999999999999998 445431 1111 1111 11222334544 3
Q ss_pred ccceEeecc-----cCCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 281 ECDVLVPCA-----LGGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA-----~~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
+||+++-|. ..+.|+++....++ -.+++.-+-+++ +.+ ..+.|.+..|.
T Consensus 219 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 219 LCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp GCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred cCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 799999885 33456666666664 357888888875 443 35778887764
No 49
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.01 E-value=0.00061 Score=67.46 Aligned_cols=107 Identities=23% Similarity=0.351 Sum_probs=73.6
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
+.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|.+.. .... +. +....+.++++ .
T Consensus 136 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~-~~d~~~~----------~~~~--~~--------g~~~~~l~ell-~ 193 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVL-CYDVVKR----------EDLK--EK--------GCVYTSLDELL-K 193 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC----------HHHH--HT--------TCEECCHHHHH-H
T ss_pred ceeccCceEEEECcCHHHHHHHHHHHHCcCEEE-EECCCcc----------hhhH--hc--------CceecCHHHHH-h
Confidence 346889999999999999999999999999998 4554321 1111 11 12233444555 3
Q ss_pred ccceEeecc-----cCCccccccccccc-ceEEEecCCCCC-CHHH-HHHHHhCCce
Q 015287 281 ECDVLVPCA-----LGGVLNKENAADVK-AKFIIEAANHPT-DPEA-DEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA-----~~~~I~~~na~~i~-akiIvEgAN~p~-t~~A-~~iL~~rGI~ 329 (410)
+||+++.|. ..+.|+++....++ -.+++.-+.+++ +.+| .+.|++..|.
T Consensus 194 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 194 ESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred hCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 799999875 34567766666665 358899998884 4444 5778887775
No 50
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.99 E-value=0.0014 Score=64.68 Aligned_cols=105 Identities=24% Similarity=0.435 Sum_probs=70.8
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+.. +. + ..+ ....+.++++. +
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~~~---~~-~---------------~~~--~~~~~l~ell~-~ 198 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGATVI-GEDVFEI---KG-I---------------EDY--CTQVSLDEVLE-K 198 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC---CS-C---------------TTT--CEECCHHHHHH-H
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCcc---HH-H---------------Hhc--cccCCHHHHHh-h
Confidence 45889999999999999999999999999998 4555321 00 0 000 11223344453 7
Q ss_pred cceEeeccc-----CCccccccccccc-ceEEEecCCCC-CCHH-HHHHHHhCCce
Q 015287 282 CDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHP-TDPE-ADEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p-~t~~-A~~iL~~rGI~ 329 (410)
||+++.|.- .+.|+++....++ -.+++.-+-++ ++.+ ..+.|++.+|.
T Consensus 199 aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~ 254 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLG 254 (331)
T ss_dssp CSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCce
Confidence 999998753 3556666666664 35788888777 4444 45788888876
No 51
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.98 E-value=0.0056 Score=63.53 Aligned_cols=106 Identities=18% Similarity=0.300 Sum_probs=67.7
Q ss_pred HHHHHHHHHH-HHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccC
Q 015287 188 GVFFATEALL-AEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDF 266 (410)
Q Consensus 188 Gv~~~~~~~~-~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~ 266 (410)
|....+...+ +..+..+.|++++|.|+|.+|+.+|+.|...|++|+ ++|.+ ...+.+.....
T Consensus 246 Gt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Vi-v~D~~----------~~~a~~Aa~~g------ 308 (488)
T 3ond_A 246 GCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVI-VTEID----------PICALQATMEG------ 308 (488)
T ss_dssp HHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHHTT------
T ss_pred cccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcCC----------HHHHHHHHHhC------
Confidence 4433333333 356788999999999999999999999999999988 67764 33333333321
Q ss_pred CCCeeecCCcccccccceEeeccc-CCcccccccccccc-eEEEecCCC
Q 015287 267 QGGNAMDLNDLLVHECDVLVPCAL-GGVLNKENAADVKA-KFIIEAANH 313 (410)
Q Consensus 267 ~~~~~i~~~~ll~~~~DvliPaA~-~~~I~~~na~~i~a-kiIvEgAN~ 313 (410)
....+.++++ ..+|+++.|.- .++|+.+....++- -+|+-.++.
T Consensus 309 --~dv~~lee~~-~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 309 --LQVLTLEDVV-SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp --CEECCGGGTT-TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred --CccCCHHHHH-HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 1222233433 36899997763 45676655555533 355566654
No 52
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.97 E-value=0.017 Score=55.18 Aligned_cols=167 Identities=16% Similarity=0.187 Sum_probs=94.1
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|+|+|++|+.+++.|.+.|.+|+ +.|.+ .+.+.+..+. + .... +.++++ .+||++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~-~~d~~----------~~~~~~~~~~-g-------~~~~~~~~~~~-~~aDvv 63 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLN-VFDLV----------QSAVDGLVAA-G-------ASAARSARDAV-QGADVV 63 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EECSS----------HHHHHHHHHT-T-------CEECSSHHHHH-TTCSEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEE-EEcCC----------HHHHHHHHHC-C-------CeEcCCHHHHH-hCCCeE
Confidence 689999999999999999999999987 55763 3444444332 1 1111 222333 369999
Q ss_pred eecccCCccccc-------ccccc-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCce----------e--
Q 015287 286 VPCALGGVLNKE-------NAADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGVT----------V-- 343 (410)
Q Consensus 286 iPaA~~~~I~~~-------na~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGVi----------~-- 343 (410)
|-|.-.....++ -.+.+ +-++|+.-.+... +.+..+.+.++|+.++.- -+.|+.. +
T Consensus 64 i~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~--pv~~~~~~~~~g~l~~~~~g 141 (302)
T 2h78_A 64 ISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA--PVSGGTAGAAAGTLTFMVGG 141 (302)
T ss_dssp EECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC--CEESCHHHHHHTCEEEEEES
T ss_pred EEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE--EccCChhhHhcCCceEEeCC
Confidence 998743322121 22223 3357777766653 245567788899887642 3444431 0
Q ss_pred --hhHHHhhhc----cc-C----CCCHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 015287 344 --SYFEWVQNI----QG-F----MWEEEK----VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTL 395 (410)
Q Consensus 344 --s~~E~~qn~----~~-~----~w~~~~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 395 (410)
..++.++.+ .. . .....+ ++.-+...+...+.+.+..+++.++++.+..-++
T Consensus 142 ~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 208 (302)
T 2h78_A 142 DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIM 208 (302)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 112222111 00 0 011111 2223333344567788888899999887665544
No 53
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.94 E-value=0.0042 Score=61.23 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=74.8
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.+..- .++++ .. ....+.++++ .
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~-~dr~~~~--~~~~~---------------~~--~~~~~l~ell-~ 190 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIG-VNTTGHP--ADHFH---------------ET--VAFTATADAL-A 190 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-EESSCCC--CTTCS---------------EE--EEGGGCHHHH-H
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCCEEEE-ECCCcch--hHhHh---------------hc--cccCCHHHHH-h
Confidence 4569999999999999999999999999999985 4443210 01110 00 0012334444 4
Q ss_pred ccceEeeccc-----CCcccccccccccc-eEEEecCCCCC-CHHH-HHHHHhCCce-Eecccc
Q 015287 281 ECDVLVPCAL-----GGVLNKENAADVKA-KFIIEAANHPT-DPEA-DEILSKKGVV-ILPDIY 335 (410)
Q Consensus 281 ~~DvliPaA~-----~~~I~~~na~~i~a-kiIvEgAN~p~-t~~A-~~iL~~rGI~-v~PD~l 335 (410)
+||+++-|.- .+.|+.+....++- .+++.-+-+++ +.+| .+.|++..|. ..=|+.
T Consensus 191 ~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~ 254 (324)
T 3evt_A 191 TANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVT 254 (324)
T ss_dssp HCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSC
T ss_pred hCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCC
Confidence 7999997752 45666666666643 58899998884 5444 5778888775 333443
No 54
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.93 E-value=0.025 Score=57.17 Aligned_cols=109 Identities=14% Similarity=0.139 Sum_probs=72.3
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~ 279 (410)
+.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+ .-..+... +.+ ... .+.++++
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~-~~d~~-------~~~~~~~~----~~G-------~~~~~~l~ell- 245 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLH-YTDRH-------RLPESVEK----ELN-------LTWHATREDMY- 245 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECSS-------CCCHHHHH----HHT-------CEECSSHHHHG-
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEE-EEcCC-------ccchhhHh----hcC-------ceecCCHHHHH-
Confidence 456999999999999999999999999999998 45543 11221111 111 111 1234554
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DP-EADEILSKKGVV 329 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~-~A~~iL~~rGI~ 329 (410)
.+||+++-|.- .+.|+++....++ -.+++.-+.+++ +. +..+.|++..|.
T Consensus 246 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 246 PVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp GGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCee
Confidence 48999998753 4567666666664 368888888874 54 345778877664
No 55
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.90 E-value=0.0094 Score=57.64 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=44.6
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccCh-HHHHHHHHHHHC--CCEEEEEECCC
Q 015287 181 REAATGLGVFFATEALLAEHGKSISNMKFAIQGFGN-VGSWAAKFFHEH--GGKVVAVSDIT 239 (410)
Q Consensus 181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~--GakvVaVsD~~ 239 (410)
-.+.|.+|+...+ ++.+.+++|++++|.|.|+ ||+.+|++|..+ |++|. +++++
T Consensus 137 ~~PcTp~gi~~ll----~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVt-v~h~~ 193 (281)
T 2c2x_A 137 PLPCTPRGIVHLL----RRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVT-LCHTG 193 (281)
T ss_dssp CCCHHHHHHHHHH----HHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEE-EECTT
T ss_pred CCCChHHHHHHHH----HHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEE-EEECc
Confidence 3578999876554 4568899999999999997 699999999999 89887 77653
No 56
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.88 E-value=0.00082 Score=67.18 Aligned_cols=171 Identities=13% Similarity=0.147 Sum_probs=90.9
Q ss_pred CCeEEEEccChHHHHHHHHHHHCC----CEEEEEECCCCceeCCC--CCCH-HHHHHHHHhCCCcccCCCCeeecCCccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHG----GKVVAVSDITGAIKNPN--GIDV-PALLKYKKSNKSLNDFQGGNAMDLNDLL 278 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~G----akvVaVsD~~G~i~~~~--GlDi-~~l~~~~~~~g~v~~~~~~~~i~~~~ll 278 (410)
-.+|+|.|+|+||+.+++.|.+.. .+|++|+|++...++++ |++. ....+..+... + ...+.+.++
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~------~-~~~did~v~ 76 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAAST------T-KTLPLDDLI 76 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCC------C-BCCCHHHHH
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhccc------C-CCCCHHHHH
Confidence 368999999999999999998863 79999999987778777 8764 22223222210 0 001112222
Q ss_pred c-----cccceEeecccCCcccccccccc--cceEEE--ecCCCCCCHHHHHHH--HhCCceEecccccccc-CceehhH
Q 015287 279 V-----HECDVLVPCALGGVLNKENAADV--KAKFII--EAANHPTDPEADEIL--SKKGVVILPDIYANSG-GVTVSYF 346 (410)
Q Consensus 279 ~-----~~~DvliPaA~~~~I~~~na~~i--~akiIv--EgAN~p~t~~A~~iL--~~rGI~v~PD~laNaG-GVi~s~~ 346 (410)
+ ...||++.|.-....-..-...+ +..+|+ +.+......++.++. +++|+.+.=.....+| .++...-
T Consensus 77 e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~~A~~~gv~~~~Ea~vg~giPii~~l~ 156 (358)
T 1ebf_A 77 AHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAGLPIISFLR 156 (358)
T ss_dssp HHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEECGGGTTTTSSCHHHHH
T ss_pred HHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHHHHHHcCCEEEEccccccCCcHHHHHH
Confidence 1 13399999975432211112223 335666 443322214555543 4467766433223233 3334434
Q ss_pred HHhhh---c---ccCCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHcCC
Q 015287 347 EWVQN---I---QGFMWE--EEKVNHEL----KRYMMSAFKDIKTMCQTHNC 386 (410)
Q Consensus 347 E~~qn---~---~~~~w~--~~~v~~~l----~~~m~~~~~~v~~~a~~~~~ 386 (410)
+.+.. + .+ -++ -.-+..++ ++ ...|.+++..|++.|.
T Consensus 157 ~~l~~G~~I~~I~G-IlnGT~nyil~~m~~~~~~--g~~f~~~l~eAq~~Gy 205 (358)
T 1ebf_A 157 EIIQTGDEVEKIEG-IFSGTLSYIFNEFSTSQAN--DVKFSDVVKVAKKLGY 205 (358)
T ss_dssp HHHHHTCCEEEEEE-ECCHHHHHHHHHHSCSSCC--CCCHHHHHHHHHHHTC
T ss_pred HHHHcCCCeEEEEE-EEeecceeeeccccccccc--CCCHHHHHHHHHHcCC
Confidence 44421 0 01 011 12233332 11 2578999999998885
No 57
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.87 E-value=0.0032 Score=65.98 Aligned_cols=108 Identities=24% Similarity=0.302 Sum_probs=71.2
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
|.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+ - +.+.. .+.+ ....+.++++ .
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~-~~d~~-------~-~~~~a----~~~g-------~~~~~l~e~~-~ 195 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVV-AYDPY-------V-SPARA----AQLG-------IELLSLDDLL-A 195 (529)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECTT-------S-CHHHH----HHHT-------CEECCHHHHH-H
T ss_pred ccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EECCC-------C-ChhHH----HhcC-------cEEcCHHHHH-h
Confidence 346899999999999999999999999999988 44543 1 22221 1111 1222333444 3
Q ss_pred ccceEeecc-----cCCccccccccccc-ceEEEecCCCCC-CHHH-HHHHHhCCce
Q 015287 281 ECDVLVPCA-----LGGVLNKENAADVK-AKFIIEAANHPT-DPEA-DEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA-----~~~~I~~~na~~i~-akiIvEgAN~p~-t~~A-~~iL~~rGI~ 329 (410)
+||+++.|. ..+.|+++....++ -.+|+.-+-+.+ +.++ .+.|.+..|.
T Consensus 196 ~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ 252 (529)
T 1ygy_A 196 RADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVR 252 (529)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEE
T ss_pred cCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCcc
Confidence 899999885 45566665555554 468888888875 4333 3677776553
No 58
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.86 E-value=0.0073 Score=62.63 Aligned_cols=97 Identities=20% Similarity=0.313 Sum_probs=67.2
Q ss_pred HhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc
Q 015287 199 EHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL 278 (410)
Q Consensus 199 ~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll 278 (410)
..+..+.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+ .....+.... +....+.++++
T Consensus 250 ~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Vi-v~d~~----------~~~~~~a~~~--------g~~~~~l~ell 310 (479)
T 1v8b_A 250 ATDFLISGKIVVICGYGDVGKGCASSMKGLGARVY-ITEID----------PICAIQAVME--------GFNVVTLDEIV 310 (479)
T ss_dssp HHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEE-EECSC----------HHHHHHHHTT--------TCEECCHHHHT
T ss_pred ccccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEE-EEeCC----------hhhHHHHHHc--------CCEecCHHHHH
Confidence 35678999999999999999999999999999998 55653 2222222211 11222334444
Q ss_pred ccccceEeecc-cCCcccccccccccc-eEEEecCCCCC
Q 015287 279 VHECDVLVPCA-LGGVLNKENAADVKA-KFIIEAANHPT 315 (410)
Q Consensus 279 ~~~~DvliPaA-~~~~I~~~na~~i~a-kiIvEgAN~p~ 315 (410)
.++|+++-|. ..+.|+.+....++- .+|+.-+-+.+
T Consensus 311 -~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 311 -DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp -TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred -hcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCCc
Confidence 3799999984 456788776666653 47788877765
No 59
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.84 E-value=0.013 Score=57.60 Aligned_cols=108 Identities=20% Similarity=0.212 Sum_probs=68.8
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
+.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+. +.+... +.+ ....+.++++ .
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~--------~~~~~~----~~g-------~~~~~l~~~l-~ 203 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRIL-YYSRTR--------KEEVER----ELN-------AEFKPLEDLL-R 203 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSC--------CHHHHH----HHC-------CEECCHHHHH-H
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEE-EECCCc--------chhhHh----hcC-------cccCCHHHHH-h
Confidence 346899999999999999999999999999988 556542 111111 111 1112223444 3
Q ss_pred ccceEeecccC-----Cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 281 ECDVLVPCALG-----GVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA~~-----~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
+||+++.|.-. +.|+++....++ -.+++.-+.+++ +.+ ..+.|.+..|.
T Consensus 204 ~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ 260 (334)
T 2dbq_A 204 ESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIA 260 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCee
Confidence 89999988743 344443334443 347788888874 433 34778886664
No 60
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.84 E-value=0.0026 Score=62.82 Aligned_cols=106 Identities=23% Similarity=0.292 Sum_probs=69.9
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+.. +. + ..+ ....+.++++ .
T Consensus 140 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~~~---~~-~---------------~~~--~~~~~l~ell-~ 196 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVI-AYDPYPM---KG-D---------------HPD--FDYVSLEDLF-K 196 (333)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC---SS-C---------------CTT--CEECCHHHHH-H
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCcc---hh-h---------------Hhc--cccCCHHHHH-h
Confidence 356899999999999999999999999999998 4554321 00 0 000 1122334444 3
Q ss_pred ccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHHH-HHHHHhCCce
Q 015287 281 ECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPEA-DEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~A-~~iL~~rGI~ 329 (410)
.||+++-|.- .+.|+++....++ -.+++.-+-+++ +.++ .+.|++.+|.
T Consensus 197 ~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 197 QSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp HCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred cCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCcc
Confidence 7999998863 3345555555554 357777777774 5444 5778888775
No 61
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.84 E-value=0.003 Score=62.31 Aligned_cols=107 Identities=17% Similarity=0.204 Sum_probs=71.1
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-eecCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-AMDLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-~i~~~~ll~ 279 (410)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.+.. ... .+.... ..+.++++
T Consensus 135 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~-~dr~~~--~~~------------------~~~~~~~~~~l~ell- 192 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLG-VSRSGR--ERA------------------GFDQVYQLPALNKML- 192 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSSCC--CCT------------------TCSEEECGGGHHHHH-
T ss_pred CcccccceEEEEEECHHHHHHHHHHHhCCCEEEE-EcCChH--Hhh------------------hhhcccccCCHHHHH-
Confidence 3569999999999999999999999999999984 454320 000 010000 11223443
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
.+|||++-|.- .+.|+.+....++ -.+++.-+-+++ +.+ ..+.|++..|.
T Consensus 193 ~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 250 (324)
T 3hg7_A 193 AQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLG 250 (324)
T ss_dssp HTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSS
T ss_pred hhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCce
Confidence 47999987753 4566666665554 458899998884 444 35778888774
No 62
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.83 E-value=0.0045 Score=64.41 Aligned_cols=107 Identities=16% Similarity=0.238 Sum_probs=71.3
Q ss_pred HhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc
Q 015287 199 EHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL 278 (410)
Q Consensus 199 ~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll 278 (410)
..+..+.|++|.|.|+|.+|+.+|+.|...|++|+ +.|.+ .....+.... +....+.++++
T Consensus 270 ~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~-v~d~~----------~~~~~~a~~~--------G~~~~~l~ell 330 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVW-VTEID----------PICALQAAME--------GYRVVTMEYAA 330 (494)
T ss_dssp HHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSC----------HHHHHHHHTT--------TCEECCHHHHT
T ss_pred ccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeCC----------hHhHHHHHHc--------CCEeCCHHHHH
Confidence 35778999999999999999999999999999998 56653 2222121111 12222334444
Q ss_pred ccccceEeecc-cCCcccccccccccc-eEEEecCCCCC--CHHHHHHHHh
Q 015287 279 VHECDVLVPCA-LGGVLNKENAADVKA-KFIIEAANHPT--DPEADEILSK 325 (410)
Q Consensus 279 ~~~~DvliPaA-~~~~I~~~na~~i~a-kiIvEgAN~p~--t~~A~~iL~~ 325 (410)
.++||++-|. ..+.|+.+....++- .+|+.-+-+++ +.++-+.|++
T Consensus 331 -~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL~AL~~ 380 (494)
T 3d64_A 331 -DKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQW 380 (494)
T ss_dssp -TTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGGTTSEE
T ss_pred -hcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCcchhchHHHHhhhc
Confidence 3799999885 356788777666653 57788887765 4443344443
No 63
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.83 E-value=0.027 Score=53.46 Aligned_cols=169 Identities=14% Similarity=0.121 Sum_probs=94.4
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|+|+|++|+.+++.|.+.|.+|+ +.|.+. +.+.+..+. +.... +.++++ .+||++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~-~~dr~~----------~~~~~~~~~--------g~~~~~~~~~~~-~~aDvv 61 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVT-IWNRSP----------EKAEELAAL--------GAERAATPCEVV-ESCPVT 61 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSG----------GGGHHHHHT--------TCEECSSHHHHH-HHCSEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEE-EEcCCH----------HHHHHHHHC--------CCeecCCHHHHH-hcCCEE
Confidence 689999999999999999999999987 667642 222222222 11211 222333 368999
Q ss_pred eecccCCccccccc-------ccc-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCc----------ee--
Q 015287 286 VPCALGGVLNKENA-------ADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGV----------TV-- 343 (410)
Q Consensus 286 iPaA~~~~I~~~na-------~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGV----------i~-- 343 (410)
|-|.-...-.++.+ +.+ +-++|+...+.+. +.+..+.+.++|+.++.-- -+|+. ++
T Consensus 62 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~p--v~g~~~~a~~g~l~~~~gg 139 (287)
T 3pef_A 62 FAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAP--VSGSKKPAEDGTLIILAAG 139 (287)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECC--EECCHHHHHHTCEEEEEEE
T ss_pred EEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECC--CcCCHHHHhcCCEEEEEeC
Confidence 98865332222222 222 3357777766542 3445567889999876311 12222 11
Q ss_pred --hhHHHhhhc----c----cC-CCCHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015287 344 --SYFEWVQNI----Q----GF-MWEEEK----VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGV 397 (410)
Q Consensus 344 --s~~E~~qn~----~----~~-~w~~~~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~ 397 (410)
..++.++.+ . .. .....+ ++.-+...+...+.+.+..+++.|+++.+..-++..
T Consensus 140 ~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~ 208 (287)
T 3pef_A 140 DRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGA 208 (287)
T ss_dssp CHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 122333221 0 00 011122 222233334456788888999999998887766553
No 64
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.81 E-value=0.0027 Score=63.31 Aligned_cols=109 Identities=14% Similarity=0.269 Sum_probs=69.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccccc-
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHEC- 282 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~- 282 (410)
++.++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.+ .+.+.+..+. + +... -+.++++ .++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~-v~dr~----------~~~~~~l~~~-g-~~~~-----~s~~e~~-~~a~ 80 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECV-VYDLN----------VNAVQALERE-G-IAGA-----RSIEEFC-AKLV 80 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHTT-T-CBCC-----SSHHHHH-HHSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEE-EEeCC----------HHHHHHHHHC-C-CEEe-----CCHHHHH-hcCC
Confidence 456899999999999999999999999987 66763 3444443332 1 1110 1223333 244
Q ss_pred --ceEeecccCCccccccccc----c-cceEEEecCCCCC--CHHHHHHHHhCCceEec
Q 015287 283 --DVLVPCALGGVLNKENAAD----V-KAKFIIEAANHPT--DPEADEILSKKGVVILP 332 (410)
Q Consensus 283 --DvliPaA~~~~I~~~na~~----i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~P 332 (410)
|++|-|.-.. ...+.+.. + .-.+|+..+|... +.+..+.|.++|+.+++
T Consensus 81 ~~DvVi~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vd 138 (358)
T 4e21_A 81 KPRVVWLMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVD 138 (358)
T ss_dssp SSCEEEECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCEEEEeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEe
Confidence 9999886444 22222222 3 3468999998873 45556789999998874
No 65
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=96.79 E-value=0.0045 Score=61.51 Aligned_cols=112 Identities=20% Similarity=0.296 Sum_probs=74.5
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
+.++.|+||.|.|+|++|+.+|+.|...|.+|+ +.|.+.. + . . . . .....+.++++ .
T Consensus 143 ~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~-~~d~~~~-------~--~----~-~-~------~~~~~~l~ell-~ 199 (343)
T 2yq5_A 143 SNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVI-AYDVAYN-------P--E----F-E-P------FLTYTDFDTVL-K 199 (343)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC-------G--G----G-T-T------TCEECCHHHHH-H
T ss_pred ccccCCCeEEEEecCHHHHHHHHHHhhCCCEEE-EECCChh-------h--h----h-h-c------cccccCHHHHH-h
Confidence 346889999999999999999999999999998 4455321 0 0 0 0 0 11222344554 4
Q ss_pred ccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce-Eecccc
Q 015287 281 ECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV-ILPDIY 335 (410)
Q Consensus 281 ~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~-v~PD~l 335 (410)
+|||++-|.- .+.|+.+....++ -.+++.-+-+++ ..+ ..+.|++..|. ..=|++
T Consensus 200 ~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~ 263 (343)
T 2yq5_A 200 EADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTL 263 (343)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCC
T ss_pred cCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEeccc
Confidence 7999998763 4566666655554 358899998884 444 45788888774 333433
No 66
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.79 E-value=0.012 Score=58.17 Aligned_cols=110 Identities=17% Similarity=0.207 Sum_probs=71.5
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~ 279 (410)
+.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+.. -. . +.... +.++++
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~dr~~~-----~~---------------~---g~~~~~~l~ell- 213 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEAFDCPIS-YFSRSKK-----PN---------------T---NYTYYGSVVELA- 213 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEE-EECSSCC-----TT---------------C---CSEEESCHHHHH-
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECCCch-----hc---------------c---CceecCCHHHHH-
Confidence 346899999999999999999999999999987 5565421 00 0 11111 223333
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-C-HHHHHHHHhCCce-Eecccc
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-D-PEADEILSKKGVV-ILPDIY 335 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t-~~A~~iL~~rGI~-v~PD~l 335 (410)
.+||+++-|.- .+.|+++....++ -.+|+.-+.+++ + .+..+.|.+.++. ..-|++
T Consensus 214 ~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~ 278 (333)
T 3ba1_A 214 SNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVF 278 (333)
T ss_dssp HTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCC
T ss_pred hcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecC
Confidence 37999998863 3455544444443 357888888874 3 4455778887764 334444
No 67
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.75 E-value=0.0081 Score=57.76 Aligned_cols=171 Identities=14% Similarity=0.144 Sum_probs=96.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccce
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDV 284 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dv 284 (410)
..++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.+ .+.+.+..+. +... ..-+.++++ .+||+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~-~~dr~----------~~~~~~~~~~-g~~~-----~~~~~~e~~-~~aDv 67 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTW-GADLN----------PQACANLLAE-GACG-----AAASAREFA-GVVDA 67 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHHT-TCSE-----EESSSTTTT-TTCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEE-EEECC----------HHHHHHHHHc-CCcc-----ccCCHHHHH-hcCCE
Confidence 34689999999999999999999999987 55653 3444444332 2110 012334444 47999
Q ss_pred EeecccCCccccc-------ccccc-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCc----------ee-
Q 015287 285 LVPCALGGVLNKE-------NAADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGV----------TV- 343 (410)
Q Consensus 285 liPaA~~~~I~~~-------na~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGV----------i~- 343 (410)
+|-|.-....... -.+.+ .-++|+..++.+. +.+..+.+.++|+.++.- .-+|+. ++
T Consensus 68 vi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~--pv~g~~~~a~~g~l~~~~g 145 (303)
T 3g0o_A 68 LVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDA--PVSGGAVKAAQGEMTVMAS 145 (303)
T ss_dssp EEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEEC--CEESCHHHHHTTCEEEEEE
T ss_pred EEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeC--CCCCChhhhhcCCeEEEeC
Confidence 9988654322222 12233 3357787776542 334556788899887631 122322 11
Q ss_pred ---hhHHHhhhc----c----cCC--CCHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 015287 344 ---SYFEWVQNI----Q----GFM--WEEEK----VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTL 395 (410)
Q Consensus 344 ---s~~E~~qn~----~----~~~--w~~~~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 395 (410)
..+|.++.+ . ... ....+ ++..+...+...+.+.+..+++.++++.+...++
T Consensus 146 g~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~ 214 (303)
T 3g0o_A 146 GSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVV 214 (303)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 122333221 0 000 11112 2223333344567788888899999988776655
No 68
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.73 E-value=0.022 Score=54.58 Aligned_cols=124 Identities=16% Similarity=0.225 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcc
Q 015287 186 GLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLN 264 (410)
Q Consensus 186 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~ 264 (410)
+.|...+ +++..+.+++++++.|.|.|.+|+.++..|.+.|+ +|+ |.+.+ .+...+..++-+.
T Consensus 103 ~~G~~~~---lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~-i~~R~----------~~~a~~la~~~~~-- 166 (272)
T 3pwz_A 103 GIGLLRD---IEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELV-IANRD----------MAKALALRNELDH-- 166 (272)
T ss_dssp HHHHHHH---HHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEE-EECSC----------HHHHHHHHHHHCC--
T ss_pred HHHHHHH---HHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEE-EEeCC----------HHHHHHHHHHhcc--
Confidence 5666555 13456788999999999999999999999999997 665 77764 3444444433221
Q ss_pred cCCCCeeecCCcccccccceEeecccCCc------ccccccccc-cceEEEecCCCCC-CHHHHHHHHhCCce-Ee
Q 015287 265 DFQGGNAMDLNDLLVHECDVLVPCALGGV------LNKENAADV-KAKFIIEAANHPT-DPEADEILSKKGVV-IL 331 (410)
Q Consensus 265 ~~~~~~~i~~~~ll~~~~DvliPaA~~~~------I~~~na~~i-~akiIvEgAN~p~-t~~A~~iL~~rGI~-v~ 331 (410)
......+.+++-..++||+|-|.--+. +..+ .+ +..+|++-.-+|. |+ --+..+++|+. ++
T Consensus 167 --~~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~---~l~~~~~V~DlvY~P~~T~-ll~~A~~~G~~~~~ 236 (272)
T 3pwz_A 167 --SRLRISRYEALEGQSFDIVVNATSASLTADLPPLPAD---VLGEAALAYELAYGKGLTP-FLRLAREQGQARLA 236 (272)
T ss_dssp --TTEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGG---GGTTCSEEEESSCSCCSCH-HHHHHHHHSCCEEE
T ss_pred --CCeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHH---HhCcCCEEEEeecCCCCCH-HHHHHHHCCCCEEE
Confidence 011223334443368999996653221 2222 23 3468899988884 66 44456788876 54
No 69
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.70 E-value=0.0091 Score=58.29 Aligned_cols=100 Identities=24% Similarity=0.323 Sum_probs=66.8
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+.. -.. + . ..+.++++ .+
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~~~-----~~~-------------~-~-----~~~l~ell-~~ 193 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGMRVV-YHARTPK-----PLP-------------Y-P-----FLSLEELL-KE 193 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC-----SSS-------------S-C-----BCCHHHHH-HH
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCCEEE-EECCCCc-----ccc-------------c-c-----cCCHHHHH-hh
Confidence 46899999999999999999999999999988 5555321 000 0 1 11223333 37
Q ss_pred cceEeecc-----cCCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCc
Q 015287 282 CDVLVPCA-----LGGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGV 328 (410)
Q Consensus 282 ~DvliPaA-----~~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI 328 (410)
||+++-|. ..+.|+++....++ -.+++.-+.+++ +.+ ..+.|. ..|
T Consensus 194 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i 247 (311)
T 2cuk_A 194 ADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHL 247 (311)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTS
T ss_pred CCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcC
Confidence 89999884 34566655555554 357888888874 443 456677 555
No 70
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.69 E-value=0.024 Score=54.65 Aligned_cols=126 Identities=10% Similarity=0.076 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcc
Q 015287 186 GLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLN 264 (410)
Q Consensus 186 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~ 264 (410)
+.|...++ +..+.+++++++.|.|.|.+|+.++..|.+.|+ +|+ |.+.+ .+...+..++-+..
T Consensus 110 ~~G~~~~L----~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~-v~~R~----------~~~a~~la~~~~~~- 173 (281)
T 3o8q_A 110 GEGLVQDL----LAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASIT-VTNRT----------FAKAEQLAELVAAY- 173 (281)
T ss_dssp HHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEE-EEESS----------HHHHHHHHHHHGGG-
T ss_pred HHHHHHHH----HHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEE-EEECC----------HHHHHHHHHHhhcc-
Confidence 66766665 456788999999999999999999999999997 665 77764 33433333321110
Q ss_pred cCCCCeeecCCcccccccceEeecccCCccccc---ccccc-cceEEEecCCCC-CCHHHHHHHHhCCce-Ee
Q 015287 265 DFQGGNAMDLNDLLVHECDVLVPCALGGVLNKE---NAADV-KAKFIIEAANHP-TDPEADEILSKKGVV-IL 331 (410)
Q Consensus 265 ~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~~---na~~i-~akiIvEgAN~p-~t~~A~~iL~~rGI~-v~ 331 (410)
......+.+++. .++||+|-|.--+...+. ....+ ...+|++-.-+| .|+-. +..+++|+. ++
T Consensus 174 --~~~~~~~~~~l~-~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~ll-~~A~~~G~~~~~ 242 (281)
T 3o8q_A 174 --GEVKAQAFEQLK-QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFN-QWARQHGCAQAI 242 (281)
T ss_dssp --SCEEEEEGGGCC-SCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCCHHH-HHHHHTTCSEEE
T ss_pred --CCeeEeeHHHhc-CCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCHHH-HHHHHCCCCEEE
Confidence 011223333433 689999976533221110 11223 346889998888 47644 567889986 54
No 71
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.66 E-value=0.0047 Score=59.89 Aligned_cols=54 Identities=20% Similarity=0.230 Sum_probs=46.1
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccCh-HHHHHHHHHHHCCCEEEEEECCC
Q 015287 181 REAATGLGVFFATEALLAEHGKSISNMKFAIQGFGN-VGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-.+.|.+|+.. ++++.+.+++|++++|.|.|+ ||+.+|.+|..+|+.|. |+.++
T Consensus 140 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~hs~ 194 (285)
T 3l07_A 140 LESCTPKGIMT----MLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVT-TCHRF 194 (285)
T ss_dssp CCCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTT
T ss_pred CCCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEE-EEeCC
Confidence 35799999874 566778999999999999988 89999999999999976 88753
No 72
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=96.65 E-value=0.012 Score=58.36 Aligned_cols=104 Identities=19% Similarity=0.244 Sum_probs=59.9
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~ 279 (410)
+.++.|+||.|.|+|++|+.+|+.|...|.+|+ +.|.+.. .. . +... .+.++++
T Consensus 166 ~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~-~~dr~~~----~~------------------~-~~~~~~sl~ell- 220 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQIGRALASRAEAFGMSVR-YWNRSTL----SG------------------V-DWIAHQSPVDLA- 220 (340)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSSCC----TT------------------S-CCEECSSHHHHH-
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcCCcc----cc------------------c-CceecCCHHHHH-
Confidence 356899999999999999999999999999988 5565321 00 0 0111 1223444
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DP-EADEILSKKGVV 329 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~-~A~~iL~~rGI~ 329 (410)
.+||+++-|.- .+.|+++....++ -.+++..+.+++ +. +..+.|++..|.
T Consensus 221 ~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~ 278 (340)
T 4dgs_A 221 RDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIA 278 (340)
T ss_dssp HTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSS
T ss_pred hcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCce
Confidence 47899987763 3456555555554 358888888885 33 334678777664
No 73
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.65 E-value=0.0026 Score=53.69 Aligned_cols=106 Identities=11% Similarity=0.135 Sum_probs=60.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc----cc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL----VH 280 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll----~~ 280 (410)
+.++|+|.|+|.+|+.+++.|.+.|.+|+ +.|. |.+.+.+..+..-.+.. + . .+..+.+ -.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~-~id~----------~~~~~~~~~~~~~~~~~--g-d-~~~~~~l~~~~~~ 69 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVL-AVDK----------SKEKIELLEDEGFDAVI--A-D-PTDESFYRSLDLE 69 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEE-EEES----------CHHHHHHHHHTTCEEEE--C-C-TTCHHHHHHSCCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEE-EEEC----------CHHHHHHHHHCCCcEEE--C-C-CCCHHHHHhCCcc
Confidence 45689999999999999999999999998 4565 24444444433211110 0 0 1122222 23
Q ss_pred ccceEeecccCCccc---ccccccc-cceEEEecCCCCCCHHHHHHHHhCCce
Q 015287 281 ECDVLVPCALGGVLN---KENAADV-KAKFIIEAANHPTDPEADEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA~~~~I~---~~na~~i-~akiIvEgAN~p~t~~A~~iL~~rGI~ 329 (410)
++|++|-|.-....| ...++++ ..++|+-.. +++-.+.|++.|+-
T Consensus 70 ~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~~----~~~~~~~l~~~G~~ 118 (141)
T 3llv_A 70 GVSAVLITGSDDEFNLKILKALRSVSDVYAIVRVS----SPKKKEEFEEAGAN 118 (141)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHHCCCCEEEEES----CGGGHHHHHHTTCS
T ss_pred cCCEEEEecCCHHHHHHHHHHHHHhCCceEEEEEc----ChhHHHHHHHcCCC
Confidence 689888776432222 2233333 345666443 33445678888873
No 74
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.64 E-value=0.0047 Score=59.79 Aligned_cols=169 Identities=14% Similarity=0.134 Sum_probs=96.5
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
+||.++|+|++|+.+|+.|.+.|++|+ +.|.+- +.+.+ +... ++... ++.++. .+|||+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~-v~dr~~----------~~~~~-------l~~~-G~~~~~s~~e~~-~~~dvv 65 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELV-VWNRTA----------SKAEP-------LTKL-GATVVENAIDAI-TPGGIV 65 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EC-----------------CT-------TTTT-TCEECSSGGGGC-CTTCEE
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEE-EEeCCH----------HHHHH-------HHHc-CCeEeCCHHHHH-hcCCce
Confidence 489999999999999999999999997 666532 11111 1111 23322 233443 479999
Q ss_pred eecccCCcc-----cccccccc-cceEEEecCCCC--CCHHHHHHHHhCCceEeccccc------cccC--cee----hh
Q 015287 286 VPCALGGVL-----NKENAADV-KAKFIIEAANHP--TDPEADEILSKKGVVILPDIYA------NSGG--VTV----SY 345 (410)
Q Consensus 286 iPaA~~~~I-----~~~na~~i-~akiIvEgAN~p--~t~~A~~iL~~rGI~v~PD~la------NaGG--Vi~----s~ 345 (410)
|-|-..... ..+-+..+ +-++|++..+.. .+.+..+.+.++|+.++=--+. ..|- +.+ ..
T Consensus 66 i~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~ 145 (297)
T 4gbj_A 66 FSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGA 145 (297)
T ss_dssp EECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHH
T ss_pred eeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhH
Confidence 987543322 22212222 335888877754 3556677899999998722221 1121 111 22
Q ss_pred HHHhhh----ccc--CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 015287 346 FEWVQN----IQG--FMWE--------EEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTL 395 (410)
Q Consensus 346 ~E~~qn----~~~--~~w~--------~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 395 (410)
||-++. ... .++- -+-++.-+...+...+.+.+..+++.|+++.+...++
T Consensus 146 ~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l 209 (297)
T 4gbj_A 146 KERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEML 209 (297)
T ss_dssp HHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 332222 110 1111 1234555666667788899999999999988765543
No 75
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.60 E-value=0.0045 Score=52.63 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=64.2
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc----ccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV----HEC 282 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~----~~~ 282 (410)
.+|+|.|+|.+|+.+++.|.+.|.+|+ +.|. |.+.+.+..+.+-.+. +.+ .+..+.|. .++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~-vid~----------~~~~~~~~~~~g~~~i-~gd---~~~~~~l~~a~i~~a 72 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLV-VIET----------SRTRVDELRERGVRAV-LGN---AANEEIMQLAHLECA 72 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEE-EEES----------CHHHHHHHHHTTCEEE-ESC---TTSHHHHHHTTGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEE-EEEC----------CHHHHHHHHHcCCCEE-ECC---CCCHHHHHhcCcccC
Confidence 489999999999999999999999999 5565 3444444443211110 000 11223332 378
Q ss_pred ceEeecccCCcccc---cccccc--cceEEEecCCCCCCHHHHHHHHhCCce
Q 015287 283 DVLVPCALGGVLNK---ENAADV--KAKFIIEAANHPTDPEADEILSKKGVV 329 (410)
Q Consensus 283 DvliPaA~~~~I~~---~na~~i--~akiIvEgAN~p~t~~A~~iL~~rGI~ 329 (410)
|++|-|.-....|. ..++++ ..++|+-.- +++-.+.|++.|+-
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~----~~~~~~~l~~~G~d 120 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIARAH----YDDEVAYITERGAN 120 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEES----SHHHHHHHHHTTCS
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEEEEC----CHHHHHHHHHCCCC
Confidence 99988765433222 233333 457877553 45667889999984
No 76
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=96.60 E-value=0.0056 Score=59.48 Aligned_cols=167 Identities=16% Similarity=0.220 Sum_probs=100.6
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|.++|+|++|+..|+.|.+.|+.|+ |-|.+ .+.+.+..+.+ +... ++.|+ -..||++
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~-v~dr~----------~~~~~~l~~~G--------a~~a~s~~e~-~~~~dvv 63 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLN-VFDLV----------QSAVDGLVAAG--------ASAARSARDA-VQGADVV 63 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EECSS----------HHHHHHHHHTT--------CEECSSHHHH-HTTCSEE
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEE-EEcCC----------HHHHHHHHHcC--------CEEcCCHHHH-HhcCCce
Confidence 589999999999999999999999987 66653 45555555432 2222 22333 3579999
Q ss_pred eecccCC-----ccccc--cccccc-ceEEEecCCCC--CCHHHHHHHHhCCceEeccccccccCce----------e--
Q 015287 286 VPCALGG-----VLNKE--NAADVK-AKFIIEAANHP--TDPEADEILSKKGVVILPDIYANSGGVT----------V-- 343 (410)
Q Consensus 286 iPaA~~~-----~I~~~--na~~i~-akiIvEgAN~p--~t~~A~~iL~~rGI~v~PD~laNaGGVi----------~-- 343 (410)
|-|-... ++... -+..++ -++|++..+.. .+.+..+.++++|+.|+=-- -+||+. +
T Consensus 64 ~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP--VsGg~~~A~~G~L~imvGG 141 (300)
T 3obb_A 64 ISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAP--VSGGTAGAAAGTLTFMVGG 141 (300)
T ss_dssp EECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC--EESCHHHHHHTCEEEEEES
T ss_pred eecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecC--CCCCHHHHHhCCEEEEEeC
Confidence 9885322 22221 122232 37899888765 35666788999999987211 123321 1
Q ss_pred --hhHHHhhhc----c-cCCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 015287 344 --SYFEWVQNI----Q-GFMW--------EEEKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTL 395 (410)
Q Consensus 344 --s~~E~~qn~----~-~~~w--------~~~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 395 (410)
..||-++.+ . ...+ --+-++.-+...+...+.|.+..+++.|+++.....++
T Consensus 142 ~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl 208 (300)
T 3obb_A 142 DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIM 208 (300)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 123322211 0 0000 01234555666666788888889999999887665443
No 77
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.59 E-value=0.0065 Score=59.08 Aligned_cols=170 Identities=15% Similarity=0.141 Sum_probs=96.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccccc
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHEC 282 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~ 282 (410)
.+.++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.+ .+.+.+..+. +.... +.++++ .+|
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~-~~dr~----------~~~~~~l~~~--------g~~~~~~~~e~~-~~a 88 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQ-VWNRT----------PARAASLAAL--------GATIHEQARAAA-RDA 88 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHTT--------TCEEESSHHHHH-TTC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEE-EEcCC----------HHHHHHHHHC--------CCEeeCCHHHHH-hcC
Confidence 466899999999999999999999999987 56653 3444443332 12222 223333 479
Q ss_pred ceEeecccCCccccccc------ccc-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCc----------ee
Q 015287 283 DVLVPCALGGVLNKENA------ADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGV----------TV 343 (410)
Q Consensus 283 DvliPaA~~~~I~~~na------~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGV----------i~ 343 (410)
|++|-|.-......+.. +.+ +-++|+...+.+. +.+..+.+.++|+.++.-- -+|+. ++
T Consensus 89 DvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~p--v~g~~~~a~~g~l~i~~ 166 (320)
T 4dll_A 89 DIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTP--VSGGTVGAEQGTLVIMA 166 (320)
T ss_dssp SEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECC--EECHHHHHHHTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCC--CcCCHhHHhcCCeeEEe
Confidence 99998865332222222 122 3467887777652 3455677899999876321 12221 11
Q ss_pred ----hhHHHhhh----cccCC----CCHH----HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 015287 344 ----SYFEWVQN----IQGFM----WEEE----KVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTL 395 (410)
Q Consensus 344 ----s~~E~~qn----~~~~~----w~~~----~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 395 (410)
..++.++. +.... ...- -++..+...+...+.+.+..+++.|+++.+....+
T Consensus 167 gg~~~~~~~~~~ll~~~~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~ 234 (320)
T 4dll_A 167 GGKPADFERSLPLLKVFGRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAI 234 (320)
T ss_dssp ESCHHHHHHHHHHHHHHEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 11222211 10000 1111 12233333444567888888999999988776655
No 78
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.58 E-value=0.0057 Score=59.30 Aligned_cols=54 Identities=30% Similarity=0.297 Sum_probs=46.1
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccCh-HHHHHHHHHHHCCCEEEEEECCC
Q 015287 181 REAATGLGVFFATEALLAEHGKSISNMKFAIQGFGN-VGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-.+.|.+|+.. ++++.+.+++|++++|.|.|+ ||+.+|.+|..+|+.|. |++++
T Consensus 139 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVt-v~h~~ 193 (285)
T 3p2o_A 139 FLPCTPLGVMK----LLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVS-VCHIK 193 (285)
T ss_dssp CCCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTT
T ss_pred CCCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEE-EEeCC
Confidence 35799999864 556778999999999999987 89999999999999976 88763
No 79
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.52 E-value=0.029 Score=53.68 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCc
Q 015287 184 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSL 263 (410)
Q Consensus 184 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v 263 (410)
-++.|+..+++. .+.+++++++.|.|.|.+|+.+++.|.+.| +|+ ++|.+ .+.+.+..++-+..
T Consensus 110 Td~~G~~~~L~~----~~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~-v~~r~----------~~~~~~l~~~~~~~ 173 (287)
T 1nvt_A 110 TDGIGARMALEE----EIGRVKDKNIVIYGAGGAARAVAFELAKDN-NII-IANRT----------VEKAEALAKEIAEK 173 (287)
T ss_dssp CHHHHHHHHHHH----HHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEE-EECSS----------HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH----hCCCcCCCEEEEECchHHHHHHHHHHHHCC-CEE-EEECC----------HHHHHHHHHHHhhh
Confidence 478888777653 456789999999999999999999999999 877 77764 23332222210000
Q ss_pred ccCC---CCeeecCCcccccccceEeecccCCcccc---c---ccccc-cceEEEecCCCCC-CHHHHHHHHhCCceEec
Q 015287 264 NDFQ---GGNAMDLNDLLVHECDVLVPCALGGVLNK---E---NAADV-KAKFIIEAANHPT-DPEADEILSKKGVVILP 332 (410)
Q Consensus 264 ~~~~---~~~~i~~~~ll~~~~DvliPaA~~~~I~~---~---na~~i-~akiIvEgAN~p~-t~~A~~iL~~rGI~v~P 332 (410)
.... .....+..+.+ .++||+|-|+--..... . ....+ ...+|++-.-+|. |+ ..+..+++|+.+++
T Consensus 174 ~~~~~~~~~d~~~~~~~~-~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~t~-ll~~a~~~G~~~~~ 251 (287)
T 1nvt_A 174 LNKKFGEEVKFSGLDVDL-DGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETV-LLKEAKKVNAKTIN 251 (287)
T ss_dssp HTCCHHHHEEEECTTCCC-TTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSCH-HHHHHHTTTCEEEC
T ss_pred cccccceeEEEeeHHHhh-CCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCccCH-HHHHHHHCCCEEeC
Confidence 0000 00011112222 37899999885332110 0 12233 2457888876674 54 34556788887543
No 80
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.49 E-value=0.04 Score=56.12 Aligned_cols=110 Identities=20% Similarity=0.356 Sum_probs=73.1
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~ 279 (410)
+.++.|+|+.|.|+|++|+.+|+.|...|.+|+ +.|.+... . ..+.... +.++++
T Consensus 151 ~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~yd~~~~~-------------------~---~~~~~~~~sl~ell- 206 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNIGSQVGNLAESLGMTVR-YYDTSDKL-------------------Q---YGNVKPAASLDELL- 206 (416)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECTTCCC-------------------C---BTTBEECSSHHHHH-
T ss_pred CccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECCcchh-------------------c---ccCcEecCCHHHHH-
Confidence 346899999999999999999999999999998 45543110 0 0011111 234444
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce-Eeccc
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV-ILPDI 334 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~-v~PD~ 334 (410)
..||+++-|.- .+.|+++....++ -.+++..|-+++ +.+ ..+.|++..|. ..=|+
T Consensus 207 ~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDV 270 (416)
T 3k5p_A 207 KTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDV 270 (416)
T ss_dssp HHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECC
T ss_pred hhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCC
Confidence 47999997763 3566666655554 468899999985 444 45778877775 33343
No 81
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.49 E-value=0.0038 Score=58.35 Aligned_cols=106 Identities=17% Similarity=0.268 Sum_probs=57.3
Q ss_pred hCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCce--eCC--CCCCHHHHHHHHHhCCCcccCCCCeeecCC
Q 015287 200 HGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAI--KNP--NGIDVPALLKYKKSNKSLNDFQGGNAMDLN 275 (410)
Q Consensus 200 ~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i--~~~--~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~ 275 (410)
...++.+++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.+..- -.. +.+.-..+.+..++ ++.....++.
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 85 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVT-IGTRDPKATLARAEPDAMGAPPFSQWLPE------HPHVHLAAFA 85 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESCHHHHHTCC-------CCHHHHGGG------STTCEEEEHH
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEE-EEeCChhhhhhhhhhhhhcchhhhHHHhh------cCceeccCHH
Confidence 3456889999999999999999999999999987 66764210 000 00000002222221 1111222333
Q ss_pred cccccccceEeecccCCcccc---cc-cccccceEEEecCCC
Q 015287 276 DLLVHECDVLVPCALGGVLNK---EN-AADVKAKFIIEAANH 313 (410)
Q Consensus 276 ~ll~~~~DvliPaA~~~~I~~---~n-a~~i~akiIvEgAN~ 313 (410)
+++ .+||++|-|.-...+.+ +. .+.+.-++|+..+|+
T Consensus 86 e~~-~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~ 126 (245)
T 3dtt_A 86 DVA-AGAELVVNATEGASSIAALTAAGAENLAGKILVDIANP 126 (245)
T ss_dssp HHH-HHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCC
T ss_pred HHH-hcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCC
Confidence 433 47999998875443321 11 222355799999985
No 82
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.48 E-value=0.0038 Score=64.79 Aligned_cols=175 Identities=14% Similarity=0.146 Sum_probs=107.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-eecCCccccc--c
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-AMDLNDLLVH--E 281 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-~i~~~~ll~~--~ 281 (410)
..++|.|+|+|++|+++|+.|.+.|.+|+ +.|.+ .+.+.+..+... . +. ... ..+.+++... +
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~-v~dr~----------~~~~~~l~~~g~-~-g~-~i~~~~s~~e~v~~l~~ 68 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVC-AFNRT----------VSKVDDFLANEA-K-GT-KVVGAQSLKEMVSKLKK 68 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEE-EECSS----------THHHHHHHHTTT-T-TS-SCEECSSHHHHHHTBCS
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEE-EEeCC----------HHHHHHHHhccc-C-CC-ceeccCCHHHHHhhccC
Confidence 34689999999999999999999999987 66764 234444333211 0 00 000 1133445442 6
Q ss_pred cceEeecccCCcccccc----cccc-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCc--------e-e--
Q 015287 282 CDVLVPCALGGVLNKEN----AADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGV--------T-V-- 343 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~n----a~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGV--------i-~-- 343 (410)
+|+++-|--.+....+. ++.+ +-++|+...|... |.+..+.|.++|+.++.-- -+||. + +
T Consensus 69 aDvVil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~p--VsGg~~gA~~G~~im~GG 146 (484)
T 4gwg_A 69 PRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSG--VSGGEEGARYGPSLMPGG 146 (484)
T ss_dssp SCEEEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE--EESHHHHHHHCCEEEEEE
T ss_pred CCEEEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCC--ccCCHHHHhcCCeeecCC
Confidence 99999886554333222 2333 3479999999873 4555578999999877421 22222 1 1
Q ss_pred --hhHHHhhhc----cc-C-------CCC--------HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Q 015287 344 --SYFEWVQNI----QG-F-------MWE--------EEKVNHELKRYMMSAFKDIKTMCQT-HNCNLRMGAFTL 395 (410)
Q Consensus 344 --s~~E~~qn~----~~-~-------~w~--------~~~v~~~l~~~m~~~~~~v~~~a~~-~~~~~r~aA~~~ 395 (410)
..+|.++.+ .. . .|- -.-++.-++..+...+.+.+..+++ .|+++.+.+.++
T Consensus 147 ~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~ 221 (484)
T 4gwg_A 147 NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAF 221 (484)
T ss_dssp CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 223333221 10 0 121 1345667777788899999999999 999988776654
No 83
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.47 E-value=0.0077 Score=58.76 Aligned_cols=54 Identities=22% Similarity=0.305 Sum_probs=46.2
Q ss_pred CCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccCh-HHHHHHHHHHHCCCEEEEEECC
Q 015287 180 GREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGN-VGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 180 gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~ 238 (410)
+-.+.|.+|+.. ++++.+.+++|++++|.|.|+ ||+.+|.+|...|+.|. |+++
T Consensus 143 ~~~PcTp~gv~~----lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~~~ 197 (300)
T 4a26_A 143 PFTPCTAKGVIV----LLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVT-IVHS 197 (300)
T ss_dssp SCCCHHHHHHHH----HHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECT
T ss_pred CCCCCCHHHHHH----HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEE-EEeC
Confidence 335799999765 455678999999999999987 89999999999999976 8886
No 84
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.45 E-value=0.01 Score=57.72 Aligned_cols=102 Identities=19% Similarity=0.225 Sum_probs=70.4
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccccc
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHEC 282 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~ 282 (410)
++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+.. +. + .. ...+.++++ .+|
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~dr~~~---~~--------------~-~~-----~~~~l~ell-~~a 175 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVR-GFSRTPK---EG--------------P-WR-----FTNSLEEAL-REA 175 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEE-EECSSCC---CS--------------S-SC-----CBSCSHHHH-TTC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCCcc---cc--------------C-cc-----cCCCHHHHH-hhC
Confidence 5899999999999999999999999999988 4565431 00 0 00 011233444 379
Q ss_pred ceEeecc-----cCCccccccccccc-ceEEEecCCCCC-CH-HHHHHHHhCCce
Q 015287 283 DVLVPCA-----LGGVLNKENAADVK-AKFIIEAANHPT-DP-EADEILSKKGVV 329 (410)
Q Consensus 283 DvliPaA-----~~~~I~~~na~~i~-akiIvEgAN~p~-t~-~A~~iL~~rGI~ 329 (410)
|+++-|. ..+.|+++....++ -.+++.-+.+++ +. +..+.|.+..|.
T Consensus 176 DvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~ 230 (303)
T 1qp8_A 176 RAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQF 230 (303)
T ss_dssp SEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred CEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCce
Confidence 9999876 34456666666664 468899988874 44 345778887764
No 85
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.43 E-value=0.006 Score=53.87 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=62.9
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc--
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL-- 278 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll-- 278 (410)
.++.+.+|+|.|+|.+|+.+++.|.+. |.+|+ +.|.+ .+.+....+.+-.+..- + .+..+.+
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~-vid~~----------~~~~~~~~~~g~~~~~g-d---~~~~~~l~~ 99 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISL-GIEIR----------EEAAQQHRSEGRNVISG-D---ATDPDFWER 99 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEE-EEESC----------HHHHHHHHHTTCCEEEC-C---TTCHHHHHT
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEE-EEECC----------HHHHHHHHHCCCCEEEc-C---CCCHHHHHh
Confidence 346688999999999999999999998 99998 45553 34444433322111100 0 0111111
Q ss_pred ---ccccceEeecccCCcccc---cccccc--cceEEEecCCCCCCHHHHHHHHhCCce
Q 015287 279 ---VHECDVLVPCALGGVLNK---ENAADV--KAKFIIEAANHPTDPEADEILSKKGVV 329 (410)
Q Consensus 279 ---~~~~DvliPaA~~~~I~~---~na~~i--~akiIvEgAN~p~t~~A~~iL~~rGI~ 329 (410)
-.++|++|-|.-....+. ..++.. ..++|+-. | +++..+.|.+.|+-
T Consensus 100 ~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~---~~~~~~~l~~~G~~ 154 (183)
T 3c85_A 100 ILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIA-E---YPDQLEGLLESGVD 154 (183)
T ss_dssp BCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEE-S---SHHHHHHHHHHTCS
T ss_pred ccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEE-C---CHHHHHHHHHcCCC
Confidence 136899997754322221 122222 34666643 2 35556678888874
No 86
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.43 E-value=0.031 Score=53.86 Aligned_cols=130 Identities=15% Similarity=0.084 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcc
Q 015287 185 TGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLN 264 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~ 264 (410)
-+.|...+++ ..+.+++++++.|.|.|.+|+.++..|.+.|++-|.|.+.+ .+...+..++-+.
T Consensus 110 D~~G~~~~l~----~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~----------~~~a~~la~~~~~-- 173 (283)
T 3jyo_A 110 DVSGFGRGME----EGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD----------TSRAQALADVINN-- 173 (283)
T ss_dssp HHHHHHHHHH----HHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS----------HHHHHHHHHHHHH--
T ss_pred CHHHHHHHHH----HhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC----------HHHHHHHHHHHHh--
Confidence 3667666654 45678999999999999999999999999999533477764 3333332221110
Q ss_pred cCCC--CeeecCCcccc--cccceEeecccCCcccc----cccccc-cceEEEecCCCCC-CHHHHHHHHhCCceEe
Q 015287 265 DFQG--GNAMDLNDLLV--HECDVLVPCALGGVLNK----ENAADV-KAKFIIEAANHPT-DPEADEILSKKGVVIL 331 (410)
Q Consensus 265 ~~~~--~~~i~~~~ll~--~~~DvliPaA~~~~I~~----~na~~i-~akiIvEgAN~p~-t~~A~~iL~~rGI~v~ 331 (410)
.++. ....+.+++-+ .++||+|-|.--+.-.. -....+ +..+|++-.-+|. |+=. +.-+++|+.++
T Consensus 174 ~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll-~~A~~~G~~~~ 249 (283)
T 3jyo_A 174 AVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELL-KAARALGCETL 249 (283)
T ss_dssp HHTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSCHHH-HHHHHHTCCEE
T ss_pred hcCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCCHHH-HHHHHCcCeEe
Confidence 0111 11223233322 37999996653211100 011223 3468899999985 6533 34566787654
No 87
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.41 E-value=0.0081 Score=58.22 Aligned_cols=52 Identities=29% Similarity=0.306 Sum_probs=45.1
Q ss_pred CchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccCh-HHHHHHHHHHHCCCEEEEEECC
Q 015287 182 EAATGLGVFFATEALLAEHGKSISNMKFAIQGFGN-VGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 182 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+.|.+|+.. ++++.+.+++|++++|.|.|+ ||+.+|.+|...|+.|. ++++
T Consensus 141 ~PcTp~gv~~----lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVt-v~hs 193 (286)
T 4a5o_A 141 RPCTPKGIMT----LLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVT-VTHR 193 (286)
T ss_dssp CCHHHHHHHH----HHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEE-EECT
T ss_pred CCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEE-EEeC
Confidence 5799999855 556778999999999999977 99999999999999987 7765
No 88
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.38 E-value=0.0091 Score=57.90 Aligned_cols=102 Identities=18% Similarity=0.241 Sum_probs=69.9
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccc
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHE 281 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~ 281 (410)
++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.+..- .+ . .... +.++++ .+
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~-~dr~~~~-----~~---------------~---~~~~~~l~ell-~~ 173 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVIA-YTRSSVD-----QN---------------V---DVISESPADLF-RQ 173 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCEEEE-ECSSCCC-----TT---------------C---SEECSSHHHHH-HH
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcEEEE-Eeccccc-----cc---------------c---ccccCChHHHh-hc
Confidence 58999999999999999999999999999984 4543210 00 0 1122 223444 47
Q ss_pred cceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 282 CDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
||+++-|.- .+.|+.+....++ -.+++.-+.+++ +.+ ..+.|++++|.
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccce
Confidence 899987763 4456666666664 358888888874 444 45788888775
No 89
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.38 E-value=0.048 Score=55.22 Aligned_cols=105 Identities=21% Similarity=0.309 Sum_probs=70.4
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV 279 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~ 279 (410)
+.++.|+|+.|.|+|++|+.+|+.|...|.+|+ +.|.+... .. .+.... +.++++
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~-~~d~~~~~-------------------~~---~~~~~~~~l~ell- 195 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVY-FYDIENKL-------------------PL---GNATQVQHLSDLL- 195 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCCC-------------------CC---TTCEECSCHHHHH-
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EEcCCchh-------------------cc---CCceecCCHHHHH-
Confidence 456999999999999999999999999999998 45543210 00 011222 234444
Q ss_pred cccceEeeccc-----CCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 280 HECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 280 ~~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
..||+++-|.- .+.|+++....++ -.+++..|-+.+ +.+ ..+.|++..|.
T Consensus 196 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~ 253 (404)
T 1sc6_A 196 NMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLA 253 (404)
T ss_dssp HHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCcc
Confidence 37899998753 3456665555554 358888888874 444 35678776664
No 90
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.38 E-value=0.0038 Score=61.25 Aligned_cols=107 Identities=16% Similarity=0.230 Sum_probs=71.2
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.++.|+||.|.|+|++|+.+|+.|...|.+|++. |.+.. ..+++ ..+.+ ..+.++++ .+
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~-dr~~~--~~~~~---------------~~~~~--~~~l~ell-~~ 193 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCW-SRSRK--SWPGV---------------ESYVG--REELRAFL-NQ 193 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEE-ESSCC--CCTTC---------------EEEES--HHHHHHHH-HT
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEE-cCCch--hhhhh---------------hhhcc--cCCHHHHH-hh
Confidence 4689999999999999999999999999999965 33221 01111 11100 01223444 37
Q ss_pred cceEeecc-----cCCccccccccccc-ceEEEecCCCCC-CHH-HHHHHHhCCce
Q 015287 282 CDVLVPCA-----LGGVLNKENAADVK-AKFIIEAANHPT-DPE-ADEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA-----~~~~I~~~na~~i~-akiIvEgAN~p~-t~~-A~~iL~~rGI~ 329 (410)
||+++-|. ..+.|+++....++ -.+++..+.+++ ..+ ..+.|++..|.
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 249 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLK 249 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCcc
Confidence 89998775 34566666666664 468899999984 444 35778888775
No 91
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.38 E-value=0.014 Score=60.69 Aligned_cols=94 Identities=18% Similarity=0.281 Sum_probs=60.1
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH 280 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~ 280 (410)
+..+.|++|.|+|+|.||+.+|+.|...|++|+ +.|.+ ...+...++. | ...++.++++ .
T Consensus 269 ~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Vi-v~d~~----------~~~~~~A~~~-G-------a~~~~l~e~l-~ 328 (494)
T 3ce6_A 269 DALIGGKKVLICGYGDVGKGCAEAMKGQGARVS-VTEID----------PINALQAMME-G-------FDVVTVEEAI-G 328 (494)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHHT-T-------CEECCHHHHG-G
T ss_pred CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeCC----------HHHHHHHHHc-C-------CEEecHHHHH-h
Confidence 456899999999999999999999999999988 66653 3333322222 1 1222333444 4
Q ss_pred ccceEeeccc-CCcccccccccccc-eEEEecCCCC
Q 015287 281 ECDVLVPCAL-GGVLNKENAADVKA-KFIIEAANHP 314 (410)
Q Consensus 281 ~~DvliPaA~-~~~I~~~na~~i~a-kiIvEgAN~p 314 (410)
.+|+++.|.- .+.|+.+....++- -+|+.-+...
T Consensus 329 ~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 329 DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 7999999964 34566455454432 2444444443
No 92
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=96.30 E-value=0.044 Score=54.10 Aligned_cols=32 Identities=34% Similarity=0.716 Sum_probs=29.0
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.||+|.|||-+|+.+++.|.++...||+|.|.
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~evvaind~ 32 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGVEVALINDL 32 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCEEEEEecC
Confidence 37999999999999999998778999999884
No 93
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=96.28 E-value=0.011 Score=61.98 Aligned_cols=175 Identities=17% Similarity=0.184 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhhCCCCceecCccccCCCCCCCCchhHHHHHH
Q 015287 112 LSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGLGVFF 191 (410)
Q Consensus 112 ~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~g~~~~~~tGkp~~~GGs~gr~~aTg~Gv~~ 191 (410)
.+-.|-+.|...|++++.+.-||..-|-=.|++. ..---+.+.|+. .. |+. .+...-||-=+..
T Consensus 204 v~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~--~~af~il~ryr~---~i-------pvF----nDDiqGTa~V~lA 267 (555)
T 1gq2_A 204 IRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFAN--ANAFRLLHKYRN---KY-------CTF----NDDIQGTASVAVA 267 (555)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTT---TS-------EEE----ETTTHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHhhCCCcEEeecccCC--ccHHHHHHHHhc---cC-------CEe----cCccchHHHHHHH
Confidence 4556778899999999999888865455578764 333345677764 11 211 1223567777788
Q ss_pred HHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHH----CCC-------EEEEEECCCCceeCC-CCCCHHHHHHHHHh
Q 015287 192 ATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHE----HGG-------KVVAVSDITGAIKNP-NGIDVPALLKYKKS 259 (410)
Q Consensus 192 ~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~----~Ga-------kvVaVsD~~G~i~~~-~GlDi~~l~~~~~~ 259 (410)
++-.+++..|.++++.||++.|.|..|-++|++|.. .|. +|. ++|++|.|++. ++|+.. ++.
T Consensus 268 gllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~-~~D~~Gli~~~r~~l~~~-----k~~ 341 (555)
T 1gq2_A 268 GLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIW-MVDSKGLIVKGRASLTPE-----KEH 341 (555)
T ss_dssp HHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEE-EEETTEECBTTCSSCCTT-----GGG
T ss_pred HHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEE-EEECCCeeeCCCCCchHH-----HHH
Confidence 889999989999999999999999999999999986 684 566 89999999974 334421 111
Q ss_pred CCCcccCCCCeeecCCccc-ccccceEeeccc-CCccccccccccc----ceEEEecCC
Q 015287 260 NKSLNDFQGGNAMDLNDLL-VHECDVLVPCAL-GGVLNKENAADVK----AKFIIEAAN 312 (410)
Q Consensus 260 ~g~v~~~~~~~~i~~~~ll-~~~~DvliPaA~-~~~I~~~na~~i~----akiIvEgAN 312 (410)
+..-.. ..-+-.|.+ ..+.||||=++. ++++|++-++... =.||---||
T Consensus 342 ---~A~~~~-~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 396 (555)
T 1gq2_A 342 ---FAHEHC-EMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSN 396 (555)
T ss_dssp ---GCBSCC-CCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred ---HHhhcC-CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 110000 000112233 347999999985 8999999888763 468888888
No 94
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.27 E-value=0.01 Score=60.94 Aligned_cols=135 Identities=21% Similarity=0.250 Sum_probs=81.5
Q ss_pred HHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCC---EEEEEEC----CCCceeCCCCCCHHHHHHHHHhCCCc
Q 015287 191 FATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGG---KVVAVSD----ITGAIKNPNGIDVPALLKYKKSNKSL 263 (410)
Q Consensus 191 ~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga---kvVaVsD----~~G~i~~~~GlDi~~l~~~~~~~g~v 263 (410)
.++..+++..|.++++++|+|.|.|..|+.+++.|.+.|+ +|+ |+| ++|.++..+ +.+.|.++++.....
T Consensus 171 aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~-vvd~~~~R~G~~~~a~--~~~~L~~~~~~~a~~ 247 (439)
T 2dvm_A 171 AGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVR-VVELVNGKPRILTSDL--DLEKLFPYRGWLLKK 247 (439)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEE-EEEEETTEEEECCTTS--CHHHHSTTCHHHHTT
T ss_pred HHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEE-EEEccCCCcCcccccc--chhHHHHHHHHHhhc
Confidence 4555566677889999999999999999999999999998 565 888 887666542 212222211110000
Q ss_pred ccCCCCeeecCCcccccccceEeecccC--Cccccccccccc-ceEEEecCCCCCCHHHHHHHHhCCceEe
Q 015287 264 NDFQGGNAMDLNDLLVHECDVLVPCALG--GVLNKENAADVK-AKFIIEAANHPTDPEADEILSKKGVVIL 331 (410)
Q Consensus 264 ~~~~~~~~i~~~~ll~~~~DvliPaA~~--~~I~~~na~~i~-akiIvEgAN~p~t~~A~~iL~~rGI~v~ 331 (410)
.... ...-+-.+.+ .++||+|=|... +.++++....+. -.+|.+-+|-.-|+-.++. +++|..++
T Consensus 248 ~~~~-~~~~~L~e~l-~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A-~~~G~~iv 315 (439)
T 2dvm_A 248 TNGE-NIEGGPQEAL-KDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEA-KKAGARIV 315 (439)
T ss_dssp SCTT-CCCSSHHHHH-TTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHH-HHHTCSEE
T ss_pred cccc-cccccHHHHh-ccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHH-HHcCCeEE
Confidence 0000 0000011222 258999999876 888876555553 3589999764334433333 33466554
No 95
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=96.27 E-value=0.0033 Score=62.04 Aligned_cols=105 Identities=22% Similarity=0.361 Sum_probs=69.4
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVH 280 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~ 280 (410)
.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+. +. .+ ++ . + .+ . +.++++ .
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~~--------~~-~~----~~-~-~-~~-----~~~l~ell-~ 198 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVI-TYDIFR--------NP-EL----EK-K-G-YY-----VDSLDDLY-K 198 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSC--------CH-HH----HH-T-T-CB-----CSCHHHHH-H
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCCc--------ch-hH----Hh-h-C-ee-----cCCHHHHH-h
Confidence 45889999999999999999999999999998 455432 11 11 11 1 1 11 1 223444 3
Q ss_pred ccceEeeccc-----CCccccccccccc-ceEEEecCCCC-CCHH-HHHHHHhCCce
Q 015287 281 ECDVLVPCAL-----GGVLNKENAADVK-AKFIIEAANHP-TDPE-ADEILSKKGVV 329 (410)
Q Consensus 281 ~~DvliPaA~-----~~~I~~~na~~i~-akiIvEgAN~p-~t~~-A~~iL~~rGI~ 329 (410)
.||+++-|.- .+.|+++....++ -.+++.-+-++ ++.+ ..+.|++..|.
T Consensus 199 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ 255 (333)
T 1j4a_A 199 QADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIF 255 (333)
T ss_dssp HCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 7999998863 3445554444443 35778777777 4444 45788888876
No 96
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.26 E-value=0.0098 Score=57.49 Aligned_cols=172 Identities=14% Similarity=0.110 Sum_probs=95.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccccc
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHEC 282 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~ 282 (410)
.+-++|+|+|+|++|..+|+.|.+.|.+|+ +.|.+. +.+.+..+. + .... +.++++ .+|
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~-~~dr~~----------~~~~~l~~~-g-------~~~~~~~~~~~-~~a 78 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVT-VWNRTL----------SKCDELVEH-G-------ASVCESPAEVI-KKC 78 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSG----------GGGHHHHHT-T-------CEECSSHHHHH-HHC
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEE-EEeCCH----------HHHHHHHHC-C-------CeEcCCHHHHH-HhC
Confidence 445799999999999999999999999987 567642 222222221 1 1211 223333 469
Q ss_pred ceEeecccCCcccccc-------cccc-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCce----------
Q 015287 283 DVLVPCALGGVLNKEN-------AADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGVT---------- 342 (410)
Q Consensus 283 DvliPaA~~~~I~~~n-------a~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGVi---------- 342 (410)
|++|-|.-......+. ...+ .-++|+.-.+.+. +.+..+.+.++|+.++.--+ +|+..
T Consensus 79 Dvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv--~g~~~~a~~g~l~i~ 156 (310)
T 3doj_A 79 KYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPV--SGSKKPAEDGQLIIL 156 (310)
T ss_dssp SEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCE--ECCHHHHHHTCEEEE
T ss_pred CEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCC--CCChhHHhcCCeEEE
Confidence 9999886432211111 2222 3367888776542 34556778899998763211 12221
Q ss_pred e----hhHHHhhhc----c----cC-CCCHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015287 343 V----SYFEWVQNI----Q----GF-MWEEEK----VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGV 397 (410)
Q Consensus 343 ~----s~~E~~qn~----~----~~-~w~~~~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~ 397 (410)
+ ..++.++.+ . .. .....+ ++..+...+...+.+.+..+++.|+++.+...++..
T Consensus 157 ~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~ 228 (310)
T 3doj_A 157 AAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDL 228 (310)
T ss_dssp EEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 1 122322221 0 00 011111 223333334456778888899999998877665543
No 97
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.25 E-value=0.042 Score=53.01 Aligned_cols=123 Identities=15% Similarity=0.183 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCccc
Q 015287 186 GLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLND 265 (410)
Q Consensus 186 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~ 265 (410)
++|...++ +..+.+++++++.|.|.|.+|+.++..|.+.|++-|.|++.+ .+...+..++-. ...
T Consensus 106 ~~G~~~~L----~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt----------~~ka~~La~~~~-~~~ 170 (282)
T 3fbt_A 106 YIGFGKML----SKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN----------PEKTSEIYGEFK-VIS 170 (282)
T ss_dssp HHHHHHHH----HHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC----------HHHHHHHCTTSE-EEE
T ss_pred HHHHHHHH----HHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC----------HHHHHHHHHhcC-ccc
Confidence 56666555 445788999999999999999999999999999433477764 334333332110 000
Q ss_pred CCCCeeecCCcccccccceEeecccCCcccc---c--ccccc-cceEEEecCCCCC-CHHHHHHHHhCCceEec
Q 015287 266 FQGGNAMDLNDLLVHECDVLVPCALGGVLNK---E--NAADV-KAKFIIEAANHPT-DPEADEILSKKGVVILP 332 (410)
Q Consensus 266 ~~~~~~i~~~~ll~~~~DvliPaA~~~~I~~---~--na~~i-~akiIvEgAN~p~-t~~A~~iL~~rGI~v~P 332 (410)
| ..+ ++ + ++||+|=|.--+.-.. . ....+ ...+|++-.-+|. |+ --+.-+++|+.+++
T Consensus 171 ~---~~l--~~-l--~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~-ll~~A~~~G~~~~~ 235 (282)
T 3fbt_A 171 Y---DEL--SN-L--KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETL-FLKYARESGVKAVN 235 (282)
T ss_dssp H---HHH--TT-C--CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCH-HHHHHHHTTCEEEC
T ss_pred H---HHH--Hh-c--cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCH-HHHHHHHCcCeEeC
Confidence 1 001 12 2 8999996652221110 0 11112 3468899998885 54 34455678887543
No 98
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.25 E-value=0.0023 Score=61.62 Aligned_cols=167 Identities=17% Similarity=0.183 Sum_probs=93.1
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.+. + ..+.+. +. +.... +.+++.. ||++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~-~~dr~~-----~--~~~~~~---~~--------g~~~~~~~~~~~~--aDvv 74 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVT-VYDIRI-----E--AMTPLA---EA--------GATLADSVADVAA--ADLI 74 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEE-EECSST-----T--TSHHHH---HT--------TCEECSSHHHHTT--SSEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEE-EEeCCH-----H--HHHHHH---HC--------CCEEcCCHHHHHh--CCEE
Confidence 689999999999999999999999987 557642 2 122222 21 11221 3345665 9999
Q ss_pred eecccCCcccccc----cccc-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccc------cccC--cee----hhH
Q 015287 286 VPCALGGVLNKEN----AADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYA------NSGG--VTV----SYF 346 (410)
Q Consensus 286 iPaA~~~~I~~~n----a~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~la------NaGG--Vi~----s~~ 346 (410)
|-|.-......+. .+.+ .-++|+...+.+. +.+..+.+.++|+.++.--+. ..|- +++ ..+
T Consensus 75 i~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~ 154 (296)
T 3qha_A 75 HITVLDDAQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVY 154 (296)
T ss_dssp EECCSSHHHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHH
T ss_pred EEECCChHHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHH
Confidence 9886533222222 2223 3357777776652 345567788899987621110 1111 011 122
Q ss_pred HHhhhc----cc-C----CCCHH----HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 015287 347 EWVQNI----QG-F----MWEEE----KVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFT 394 (410)
Q Consensus 347 E~~qn~----~~-~----~w~~~----~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~ 394 (410)
|.++.+ .. . ....- -++..+...+...+.+.+..+++.++++.+.+-+
T Consensus 155 ~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~ 215 (296)
T 3qha_A 155 ERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRV 215 (296)
T ss_dssp HHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhh
Confidence 222221 00 0 01111 2233344444556788888999999998887443
No 99
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=96.22 E-value=0.025 Score=54.98 Aligned_cols=114 Identities=20% Similarity=0.182 Sum_probs=69.1
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccc
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVH 280 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~ 280 (410)
....++|+|+|.|++|+..++.|.+. |.+-|.|.|.+ .+...+..++.+. ..... +.++++ .
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~----------~~~~~~l~~~~~~-----~~~~~~~~~e~v-~ 195 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRT----------KENAEKFADTVQG-----EVRVCSSVQEAV-A 195 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSS----------HHHHHHHHHHSSS-----CCEECSSHHHHH-T
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC----------HHHHHHHHHHhhC-----CeEEeCCHHHHH-h
Confidence 35678999999999999999998775 77445577763 4455544443221 01111 223333 3
Q ss_pred ccceEeeccc--CCcccccccccccceEEEecCCCCCCHHHHHHHHhCCceEecc
Q 015287 281 ECDVLVPCAL--GGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPD 333 (410)
Q Consensus 281 ~~DvliPaA~--~~~I~~~na~~i~akiIvEgAN~p~t~~A~~iL~~rGI~v~PD 333 (410)
++||++-|.- ..++..+..+ -.+-++.-+.+.|-..+..+.+.++|+.++-+
T Consensus 196 ~aDiVi~atp~~~~v~~~~~l~-~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~ 249 (312)
T 2i99_A 196 GADVIITVTLATEPILFGEWVK-PGAHINAVGASRPDWRELDDELMKEAVLYVDS 249 (312)
T ss_dssp TCSEEEECCCCSSCCBCGGGSC-TTCEEEECCCCSTTCCSBCHHHHHHSEEEESC
T ss_pred cCCEEEEEeCCCCcccCHHHcC-CCcEEEeCCCCCCCceeccHHHHhcCEEEECC
Confidence 6899997753 2233331111 13345555788886566667788889876643
No 100
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.20 E-value=0.016 Score=56.44 Aligned_cols=168 Identities=12% Similarity=0.037 Sum_probs=92.8
Q ss_pred CeEEEEccChHHHHHHHHHHHCC-CEEEEEECCCCceeCCCCCC-HHHHHHHHHhCCCcccCCCCeee-cCCcccccccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHG-GKVVAVSDITGAIKNPNGID-VPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECD 283 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~G-akvVaVsD~~G~i~~~~GlD-i~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~D 283 (410)
++|+|+|+|++|+.+|+.|.+.| .+|+ +.|.+.. -.+ .++..+...+.+. .- ++.+++ .+||
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~-~~dr~~~-----~~~~~~~~~~~~~~~g~--------~~~s~~e~~-~~aD 89 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLA-AYDLRFN-----DPAASGALRARAAELGV--------EPLDDVAGI-ACAD 89 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEE-EECGGGG-----CTTTHHHHHHHHHHTTC--------EEESSGGGG-GGCS
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEE-EEeCCCc-----cccchHHHHHHHHHCCC--------CCCCHHHHH-hcCC
Confidence 68999999999999999999999 8887 6676421 111 1233333222221 22 344544 4799
Q ss_pred eEeecccCCcccc---cccccc-cceEEEecCCCC--CCHHHHHHHHhCCceEecccccc-----ccCc--eehhH--HH
Q 015287 284 VLVPCALGGVLNK---ENAADV-KAKFIIEAANHP--TDPEADEILSKKGVVILPDIYAN-----SGGV--TVSYF--EW 348 (410)
Q Consensus 284 vliPaA~~~~I~~---~na~~i-~akiIvEgAN~p--~t~~A~~iL~~rGI~v~PD~laN-----aGGV--i~s~~--E~ 348 (410)
++|-|--.....+ +-.+.+ .-++|+..++.+ ++.+..+.+.++|+.++...+.. .|.. +++.- |.
T Consensus 90 vVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~vgg~~~~~ 169 (317)
T 4ezb_A 90 VVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVAGRRAVE 169 (317)
T ss_dssp EEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEEESTTHHH
T ss_pred EEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEEeCChHHH
Confidence 9998864443322 112223 235777776654 24455678899999876432322 1111 11110 22
Q ss_pred hhhc----c----cCC--CCHH----HHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 015287 349 VQNI----Q----GFM--WEEE----KVNHELKRYMMSAFKDIKTMCQTHNCNLR 389 (410)
Q Consensus 349 ~qn~----~----~~~--w~~~----~v~~~l~~~m~~~~~~v~~~a~~~~~~~r 389 (410)
++.+ . ... ...- -++.-+...+...+.+.+..+++.|+++.
T Consensus 170 ~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~ 224 (317)
T 4ezb_A 170 VAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTER 224 (317)
T ss_dssp HHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 2221 0 000 1111 23333444556777888889999998874
No 101
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.16 E-value=0.0098 Score=61.52 Aligned_cols=175 Identities=14% Similarity=0.122 Sum_probs=102.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCccccc--
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLVH-- 280 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~~-- 280 (410)
+..++|+|+|.|++|+.+|+.|.+.|.+|+ +.|.+ .+.+.+..++.+ + .+... -+.+++...
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~-v~~r~----------~~~~~~l~~~~~---~-~gi~~~~s~~e~v~~l~ 77 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVS-IFNRS----------REKTEEVIAENP---G-KKLVPYYTVKEFVESLE 77 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEE-EECSS----------HHHHHHHHHHST---T-SCEEECSSHHHHHHTBC
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEE-EEeCC----------HHHHHHHHhhCC---C-CCeEEeCCHHHHHhCCC
Confidence 566799999999999999999999999886 66653 344444443321 0 11111 122344432
Q ss_pred ccceEeecccCCccccccc----cccc-ceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCce---------e-
Q 015287 281 ECDVLVPCALGGVLNKENA----ADVK-AKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGVT---------V- 343 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na----~~i~-akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGVi---------~- 343 (410)
+||++|-|--.+....+.+ +.++ -++|+..+|+.. |.+..+.|.++|+.++.- .++||.. +
T Consensus 78 ~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~--pv~gg~~~a~~g~~i~~g 155 (480)
T 2zyd_A 78 TPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGT--GVSGGEEGALKGPSIMPG 155 (480)
T ss_dssp SSCEEEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE--EEESHHHHHHHCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCC--ccccCHhHHhcCCeEEec
Confidence 4999998865533222222 2333 469999999873 455567888999987732 2333321 1
Q ss_pred ---hhHHHhhh----ccc--------CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Q 015287 344 ---SYFEWVQN----IQG--------FMWE--------EEKVNHELKRYMMSAFKDIKTMCQT-HNCNLRMGAFTL 395 (410)
Q Consensus 344 ---s~~E~~qn----~~~--------~~w~--------~~~v~~~l~~~m~~~~~~v~~~a~~-~~~~~r~aA~~~ 395 (410)
..++.++. ... ..|- ..-+...+...+.+.+.+.+..+++ .|+++.+..-++
T Consensus 156 g~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~ 231 (480)
T 2zyd_A 156 GQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTF 231 (480)
T ss_dssp SCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 12333322 111 1111 1123444555667888888888988 699987766554
No 102
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=96.16 E-value=0.052 Score=53.72 Aligned_cols=32 Identities=34% Similarity=0.593 Sum_probs=28.4
Q ss_pred CeEEEEccChHHHHHHHHHHHC---CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH---GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~ 238 (410)
.||+|.|||-+|+.+++.|.++ ...||+|.|.
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~ 36 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT 36 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC
Confidence 4899999999999999999876 4799999984
No 103
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.09 E-value=0.0068 Score=56.22 Aligned_cols=98 Identities=22% Similarity=0.391 Sum_probs=64.8
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEe
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLV 286 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvli 286 (410)
+||+|.|+|++|+..++.|.+.|.++++|+|.+.. .+ . ..-+.++++..++|+++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~---~~-----~-----------------~~~~~~~l~~~~~DvVv 55 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE---HE-----K-----------------MVRGIDEFLQREMDVAV 55 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC---CT-----T-----------------EESSHHHHTTSCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc---hh-----h-----------------hcCCHHHHhcCCCCEEE
Confidence 47999999999999999998899999999997531 10 0 11123455546899999
Q ss_pred ecccCCccccccccc-c--cceEEEecCCCCCCHHH----HHHHHhCCceE
Q 015287 287 PCALGGVLNKENAAD-V--KAKFIIEAANHPTDPEA----DEILSKKGVVI 330 (410)
Q Consensus 287 PaA~~~~I~~~na~~-i--~akiIvEgAN~p~t~~A----~~iL~~rGI~v 330 (410)
-|.-. ..+.+.+.. + +..+|+|..-.+..+++ .+..+++|+.+
T Consensus 56 ~~~~~-~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~ 105 (236)
T 2dc1_A 56 EAASQ-QAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRV 105 (236)
T ss_dssp ECSCH-HHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCE
T ss_pred ECCCH-HHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeE
Confidence 99743 344444433 2 45788886433333444 34567788764
No 104
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.09 E-value=0.06 Score=52.72 Aligned_cols=132 Identities=18% Similarity=0.158 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCc
Q 015287 185 TGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSL 263 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v 263 (410)
-+.|...+++ ..+.+++|+++.|.|.|.+|+.++..|.+.|+ +|+ |.+.+.. +.+...+..++-..
T Consensus 137 D~~Gf~~~L~----~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~-i~nR~~~-------~~~~a~~la~~~~~- 203 (315)
T 3tnl_A 137 DGTGYMRALK----EAGHDIIGKKMTICGAGGAATAICIQAALDGVKEIS-IFNRKDD-------FYANAEKTVEKINS- 203 (315)
T ss_dssp HHHHHHHHHH----HTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEE-EEECSST-------THHHHHHHHHHHHH-
T ss_pred CHHHHHHHHH----HcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEE-EEECCCc-------hHHHHHHHHHHhhh-
Confidence 3667666654 46788999999999999999999999999999 565 7776421 13343333222100
Q ss_pred ccCCC-CeeecCCc---ccc--cccceEeeccc---CCccccc---ccccc-cceEEEecCCCCC-CHHHHHHHHhCCce
Q 015287 264 NDFQG-GNAMDLND---LLV--HECDVLVPCAL---GGVLNKE---NAADV-KAKFIIEAANHPT-DPEADEILSKKGVV 329 (410)
Q Consensus 264 ~~~~~-~~~i~~~~---ll~--~~~DvliPaA~---~~~I~~~---na~~i-~akiIvEgAN~p~-t~~A~~iL~~rGI~ 329 (410)
.++. ...++-++ +-+ .++||+|-|.- ....+.. ....+ +..+|++-.-+|. |+ --+.-+++|+.
T Consensus 204 -~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~-ll~~A~~~G~~ 281 (315)
T 3tnl_A 204 -KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTR-LLEIAEEQGCQ 281 (315)
T ss_dssp -HSSCEEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCH-HHHHHHHTTCE
T ss_pred -hcCCceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCH-HHHHHHHCCCe
Confidence 0100 11122222 211 37999996552 2111111 12223 3468899999995 54 33445678877
Q ss_pred Ee
Q 015287 330 IL 331 (410)
Q Consensus 330 v~ 331 (410)
++
T Consensus 282 ~~ 283 (315)
T 3tnl_A 282 TL 283 (315)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 105
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.06 E-value=0.019 Score=54.27 Aligned_cols=100 Identities=17% Similarity=0.251 Sum_probs=62.2
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEe
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLV 286 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvli 286 (410)
+||+|.|+|++|+.+++.+.+.+..+|++.|.++.- . .+++- .-+.++++ ++|++|
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~----~gv~v--~~dl~~l~--~~DVvI 59 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------T----TPYQQ--YQHIADVK--GADVAI 59 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC----------------------CCSCB--CSCTTTCT--TCSEEE
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------c----CCCce--eCCHHHHh--CCCEEE
Confidence 689999999999999999988766999999986430 0 01110 11234555 899999
Q ss_pred ecccCCcccccccccc--cceEEEecCCCCCCHHHHHHH----HhCCceEeccc
Q 015287 287 PCALGGVLNKENAADV--KAKFIIEAANHPTDPEADEIL----SKKGVVILPDI 334 (410)
Q Consensus 287 PaA~~~~I~~~na~~i--~akiIvEgAN~p~t~~A~~iL----~~rGI~v~PD~ 334 (410)
.++.+.... +|+. + +..+|++-. .++++-.+.| ++.+|++.|.+
T Consensus 60 Dft~p~a~~-~~~~-l~~g~~vVigTT--G~s~e~~~~l~~aa~~~~v~~a~N~ 109 (243)
T 3qy9_A 60 DFSNPNLLF-PLLD-EDFHLPLVVATT--GEKEKLLNKLDELSQNMPVFFSANM 109 (243)
T ss_dssp ECSCHHHHH-HHHT-SCCCCCEEECCC--SSHHHHHHHHHHHTTTSEEEECSSC
T ss_pred EeCChHHHH-HHHH-HhcCCceEeCCC--CCCHHHHHHHHHHHhcCCEEEECCc
Confidence 888766553 3443 4 445776433 3455433333 33455555544
No 106
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.06 E-value=0.0065 Score=58.34 Aligned_cols=108 Identities=14% Similarity=0.220 Sum_probs=67.8
Q ss_pred CCCCeEEEEccChHHHH-HHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 204 ISNMKFAIQGFGNVGSW-AAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~-~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
++-.||+|+|+|++|+. .++.|.+ .++++++|+|.+ .+.+.+..++.+ +..| -+.++++. +
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~a~~~~-~~~~-----~~~~~ll~-~ 66 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPN----------KVKREKICSDYR-IMPF-----DSIESLAK-K 66 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSC----------HHHHHHHHHHHT-CCBC-----SCHHHHHT-T
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCC----------HHHHHHHHHHcC-CCCc-----CCHHHHHh-c
Confidence 34579999999999995 8888876 578999999974 455555444432 1112 23456777 9
Q ss_pred cceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHH---HHHHhCCceEec
Q 015287 282 CDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEAD---EILSKKGVVILP 332 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~---~iL~~rGI~v~P 332 (410)
+|+++-|. ++..+.+.+.. + +..++||= |+ + .+++ +..+++|+.+..
T Consensus 67 ~D~V~i~t-p~~~h~~~~~~al~~gk~vl~EK---P~~~~~~~~~~l~~~a~~~g~~~~v 122 (308)
T 3uuw_A 67 CDCIFLHS-STETHYEIIKILLNLGVHVYVDK---PLASTVSQGEELIELSTKKNLNLMV 122 (308)
T ss_dssp CSEEEECC-CGGGHHHHHHHHHHTTCEEEECS---SSSSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEEeC-CcHhHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 99999775 44444444332 2 44688883 32 3 3333 346677776653
No 107
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.04 E-value=0.011 Score=48.88 Aligned_cols=33 Identities=39% Similarity=0.546 Sum_probs=27.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++++|+|.|+|.+|+.+++.|.+.|.+|+ +.|.
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~-~~d~ 35 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIV-LIDI 35 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEE-EEEC
Confidence 35789999999999999999999999988 4554
No 108
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.04 E-value=0.016 Score=55.94 Aligned_cols=52 Identities=17% Similarity=0.045 Sum_probs=43.8
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccCh-HHHHHHHHHHHCCCEEEEEECCC
Q 015287 181 REAATGLGVFFATEALLAEHGKSISNMKFAIQGFGN-VGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-.+.|.+|+...++. .+ ++|++++|.|.|+ ||+.+|++|..+|++|. |++++
T Consensus 131 ~~PcTp~gv~~lL~~----~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVt-v~~~~ 183 (276)
T 3ngx_A 131 LVPATPRAVIDIMDY----YG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVS-VCHSK 183 (276)
T ss_dssp SCCHHHHHHHHHHHH----HT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTT
T ss_pred CCCCcHHHHHHHHHH----hC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEE-EEeCC
Confidence 357999999866554 45 9999999999986 89999999999999987 77763
No 109
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.00 E-value=0.008 Score=57.22 Aligned_cols=169 Identities=13% Similarity=0.091 Sum_probs=94.4
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|+|+|++|+.+++.|.+.|.+|+ +.|.+. +.+.+..+. + .... +.++++ .+||++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~-~~dr~~----------~~~~~~~~~-g-------~~~~~~~~~~~-~~advv 61 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVT-VWNRNP----------AKCAPLVAL-G-------ARQASSPAEVC-AACDIT 61 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEE-EECSSG----------GGGHHHHHH-T-------CEECSCHHHHH-HHCSEE
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEE-EEcCCH----------HHHHHHHHC-C-------CeecCCHHHHH-HcCCEE
Confidence 479999999999999999999999987 556642 222222222 1 1111 222333 479999
Q ss_pred eecccCCcccccc-------cccc-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCc--------e--e--
Q 015287 286 VPCALGGVLNKEN-------AADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGV--------T--V-- 343 (410)
Q Consensus 286 iPaA~~~~I~~~n-------a~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGV--------i--~-- 343 (410)
|-|.-......+. .+.+ +-++|+...+... +.+..+.+.++|+.++.- ..+|+. + +
T Consensus 62 i~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~--pv~g~~~~a~~g~l~~~~gg 139 (287)
T 3pdu_A 62 IAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA--PVSGTKKPAEDGTLIILAAG 139 (287)
T ss_dssp EECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC--CEECCHHHHHHTCEEEEEEE
T ss_pred EEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC--CccCCHHHHhcCCEEEEEeC
Confidence 9887543222211 2223 3367777776542 344556788999887632 122222 1 0
Q ss_pred --hhHHHhhhc----c----cCC-CCHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015287 344 --SYFEWVQNI----Q----GFM-WEEEK----VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGV 397 (410)
Q Consensus 344 --s~~E~~qn~----~----~~~-w~~~~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~ 397 (410)
..+|.++.+ . ... ...-+ ++..+...+...+.+.+..+++.|+++.+..-++..
T Consensus 140 ~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 140 DQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 122332221 0 000 11111 223333444566788888899999998887766553
No 110
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.98 E-value=0.088 Score=52.09 Aligned_cols=32 Identities=28% Similarity=0.544 Sum_probs=28.6
Q ss_pred CeEEEEccChHHHHHHHHHHHC---CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH---GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~ 238 (410)
.||+|.|||.+|+.+++.|.++ ...||+|.|.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~ 37 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT 37 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC
Confidence 4899999999999999999876 3899999885
No 111
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=95.97 E-value=0.013 Score=61.51 Aligned_cols=177 Identities=16% Similarity=0.142 Sum_probs=120.4
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhhCCCCceecCccccCCCCCCCCchhHHHHHH
Q 015287 112 LSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGLGVFF 191 (410)
Q Consensus 112 ~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~g~~~~~~tGkp~~~GGs~gr~~aTg~Gv~~ 191 (410)
.+-.|-..|...|++++...-|+..-|-=.|++. ..---+.+.|+. ..|- +- +...-||-=+..
T Consensus 206 v~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~--~~af~il~ryr~---~ipv-Fn----------DDiqGTa~V~lA 269 (564)
T 1pj3_A 206 DRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGN--HNAFRFLRKYRE---KYCT-FN----------DDIQGTAAVALA 269 (564)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTT---TSSE-EE----------HHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCC--ccHHHHHHHhcc---CCCE-eC----------CCCchHHHHHHH
Confidence 4556778899999999998888865455578764 333345677764 1121 11 112467777778
Q ss_pred HHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHH----CCC-------EEEEEECCCCceeCCC--CCCHHHHHHHHH
Q 015287 192 ATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHE----HGG-------KVVAVSDITGAIKNPN--GIDVPALLKYKK 258 (410)
Q Consensus 192 ~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~----~Ga-------kvVaVsD~~G~i~~~~--GlDi~~l~~~~~ 258 (410)
++-.+++..|.+++..||++.|.|..|-++|++|.. .|. +|. ++|++|.|++.. +|+..+ ..+.
T Consensus 270 gllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~-~~D~~Gli~~~r~~~l~~~k--~~~A 346 (564)
T 1pj3_A 270 GLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIW-MFDKYGLLVKGRKAKIDSYQ--EPFT 346 (564)
T ss_dssp HHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEE-EEETTEECBTTCSSCCCTTT--GGGC
T ss_pred HHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEE-EEeCCCeEECCCcccchHHH--HHHH
Confidence 888899989999999999999999999999999985 784 566 899999999743 454321 1111
Q ss_pred hCCCcccCCCCeeecCCccc-ccccceEeeccc-CCccccccccccc----ceEEEecCC
Q 015287 259 SNKSLNDFQGGNAMDLNDLL-VHECDVLVPCAL-GGVLNKENAADVK----AKFIIEAAN 312 (410)
Q Consensus 259 ~~g~v~~~~~~~~i~~~~ll-~~~~DvliPaA~-~~~I~~~na~~i~----akiIvEgAN 312 (410)
+. -.....-+-.|.+ .++.||||=++. ++++|++-++... =.||---||
T Consensus 347 ~~-----~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 347 HS-----APESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp BC-----CCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred Hh-----cCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 00 0000000112223 347999999985 8999999888764 468888888
No 112
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.94 E-value=0.0093 Score=57.71 Aligned_cols=109 Identities=14% Similarity=0.169 Sum_probs=67.3
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvl 285 (410)
.+|+|+|+|++|+..++.|.+. +.++++|+|.+ .+...+..++.+.... .-+.++++..++|++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~----------~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~D~V 66 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRK----------LETAATFASRYQNIQL-----FDQLEVFFKSSFDLV 66 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSS----------HHHHHHHGGGSSSCEE-----ESCHHHHHTSSCSEE
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCC----------HHHHHHHHHHcCCCeE-----eCCHHHHhCCCCCEE
Confidence 4899999999999999988875 68999999874 4444444443221111 123345665689999
Q ss_pred eecccCCccccccccc-c--cceEEEecCCCCCC-HHHHH---HHHhCCceEec
Q 015287 286 VPCALGGVLNKENAAD-V--KAKFIIEAANHPTD-PEADE---ILSKKGVVILP 332 (410)
Q Consensus 286 iPaA~~~~I~~~na~~-i--~akiIvEgAN~p~t-~~A~~---iL~~rGI~v~P 332 (410)
+-|.- +..+.+.+.. + +..++||-- ..+| .++++ ..+++|+.+..
T Consensus 67 ~i~tp-~~~h~~~~~~al~~gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~~ 118 (325)
T 2ho3_A 67 YIASP-NSLHFAQAKAALSAGKHVILEKP-AVSQPQEWFDLIQTAEKNNCFIFE 118 (325)
T ss_dssp EECSC-GGGHHHHHHHHHHTTCEEEEESS-CCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeCC-hHHHHHHHHHHHHcCCcEEEecC-CcCCHHHHHHHHHHHHHcCCEEEE
Confidence 98863 4444444333 2 345888841 1123 34443 45678887653
No 113
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=95.93 E-value=0.012 Score=61.95 Aligned_cols=177 Identities=15% Similarity=0.202 Sum_probs=121.6
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhhCCCCceecCccccCCCCCCCCchhHHHHHH
Q 015287 112 LSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGLGVFF 191 (410)
Q Consensus 112 ~s~~e~e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~g~~~~~~tGkp~~~GGs~gr~~aTg~Gv~~ 191 (410)
.+-.|-..|...|++++.+.-||..-|-=.|++. ..---|.+.|+. ..| ++- +...-||-=+..
T Consensus 242 v~g~~Yd~fvdefv~av~~~fGp~~~I~~EDf~~--p~af~il~ryr~---~ip-vFn----------DDiqGTA~V~lA 305 (605)
T 1o0s_A 242 VRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFAN--PNAFRLLDKYQD---KYT-MFN----------DDIQGTASVIVA 305 (605)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTT---TSE-EEE----------HHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhCCCcEeeHhhcCC--ccHHHHHHHhcc---CCC-eeC----------cccchHHHHHHH
Confidence 4556778899999999999888865455578764 333345577764 111 111 112467777778
Q ss_pred HHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHH----CCC-------EEEEEECCCCceeCC-CCCCHHHHHHHHHh
Q 015287 192 ATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHE----HGG-------KVVAVSDITGAIKNP-NGIDVPALLKYKKS 259 (410)
Q Consensus 192 ~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~----~Ga-------kvVaVsD~~G~i~~~-~GlDi~~l~~~~~~ 259 (410)
++-.+++..|.+++..||++.|.|..|-++|++|.. .|. +|. ++|++|.|++. ++|+. +++.
T Consensus 306 gllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~-~vD~~Gli~~~r~~l~~-----~k~~ 379 (605)
T 1o0s_A 306 GLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIY-LMDIDGLVTKNRKEMNP-----RHVQ 379 (605)
T ss_dssp HHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEE-EEETTEECBTTCSSCCG-----GGTT
T ss_pred HHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEE-EEECCCceeCCCCCchH-----HHHH
Confidence 888899989999999999999999999999999987 785 565 89999999974 33542 2111
Q ss_pred CCCcccCCCCeeecCCccc-ccccceEeeccc-CCccccccccccc----ceEEEecCCCCC
Q 015287 260 NKSLNDFQGGNAMDLNDLL-VHECDVLVPCAL-GGVLNKENAADVK----AKFIIEAANHPT 315 (410)
Q Consensus 260 ~g~v~~~~~~~~i~~~~ll-~~~~DvliPaA~-~~~I~~~na~~i~----akiIvEgAN~p~ 315 (410)
+..-.. ..-+-.|.+ .++.||||=++. ++++|++-++... -.||---|| |+
T Consensus 380 ---~A~~~~-~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN-Pt 436 (605)
T 1o0s_A 380 ---FAKDMP-ETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSN-PT 436 (605)
T ss_dssp ---TCBSSC-CCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCS-SG
T ss_pred ---HHhhcC-CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC-CC
Confidence 111000 000112233 347999999885 8999999888763 468888888 43
No 114
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.89 E-value=0.035 Score=56.27 Aligned_cols=105 Identities=24% Similarity=0.304 Sum_probs=66.0
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc----ccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL----VHE 281 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll----~~~ 281 (410)
+.+|+|.|+|.+|+.+++.|.+.|..|+ |.|. |.+.+....+.+-.+ -+-+ .+..++| -.+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vv-vId~----------d~~~v~~~~~~g~~v-i~GD---at~~~~L~~agi~~ 68 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMV-VLDH----------DPDHIETLRKFGMKV-FYGD---ATRMDLLESAGAAK 68 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEE-EEEC----------CHHHHHHHHHTTCCC-EESC---TTCHHHHHHTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEE-EEEC----------CHHHHHHHHhCCCeE-EEcC---CCCHHHHHhcCCCc
Confidence 4579999999999999999999999999 5566 345555444322111 1101 1222333 136
Q ss_pred cceEeecccCCccc---ccccccc--cceEEEecCCCCCCHHHHHHHHhCCce
Q 015287 282 CDVLVPCALGGVLN---KENAADV--KAKFIIEAANHPTDPEADEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA~~~~I~---~~na~~i--~akiIvEgAN~p~t~~A~~iL~~rGI~ 329 (410)
+|++|-|.-....| ...++++ +.++|+-.-| ++-.+.|.+.|+-
T Consensus 69 A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~----~~~~~~L~~~Gad 117 (413)
T 3l9w_A 69 AEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARD----VDHYIRLRQAGVE 117 (413)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEEESS----HHHHHHHHHTTCS
T ss_pred cCEEEECCCChHHHHHHHHHHHHhCCCCeEEEEECC----HHHHHHHHHCCCC
Confidence 89988886443332 2233333 4578886654 5666789999984
No 115
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.88 E-value=0.044 Score=46.46 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=45.5
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc--ccccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL--VHECD 283 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll--~~~~D 283 (410)
+++|.|.|.|++|+.+++.|.+.|++ |.+.|.+ .+.+.+..++.+ ......+++. -.++|
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~----------~~~~~~~a~~~~-------~~~~~~~~~~~~~~~~D 82 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRN----------IDHVRAFAEKYE-------YEYVLINDIDSLIKNND 82 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESC----------HHHHHHHHHHHT-------CEEEECSCHHHHHHTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCC----------HHHHHHHHHHhC-------CceEeecCHHHHhcCCC
Confidence 78999999999999999999999999 6688864 344444333322 1111122222 24799
Q ss_pred eEeeccc
Q 015287 284 VLVPCAL 290 (410)
Q Consensus 284 vliPaA~ 290 (410)
++|-|.-
T Consensus 83 ivi~at~ 89 (144)
T 3oj0_A 83 VIITATS 89 (144)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 9998874
No 116
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.87 E-value=0.011 Score=60.91 Aligned_cols=177 Identities=17% Similarity=0.155 Sum_probs=99.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCccccc--ccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLVH--ECD 283 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~~--~~D 283 (410)
++|+|+|.|++|+.+|..|.+.|.+|+ +.|.+ .+.+.+..++.+....-..... .+.+++... ++|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~-v~dr~----------~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aD 70 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVA-VFNRT----------YSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPR 70 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEE-EECSS----------HHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEE-EEeCC----------HHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCC
Confidence 479999999999999999999999876 66653 3444444433221000000111 122344432 599
Q ss_pred eEeecccCCccccccccc----c-cceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCc---------ee----
Q 015287 284 VLVPCALGGVLNKENAAD----V-KAKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGV---------TV---- 343 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~----i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGV---------i~---- 343 (410)
+++-|.-...-..+.++. + .-++|+..+|+.. +.+..+.+.++|+.++.- ..+||. +.
T Consensus 71 vVilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~--pv~gg~~~a~~g~~i~~gg~~ 148 (478)
T 1pgj_A 71 KALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGM--GISGGEEGARKGPAFFPGGTL 148 (478)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEE--EEESHHHHHHHCCEEEEEECH
T ss_pred EEEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEe--eccCCHHHHhcCCeEeccCCH
Confidence 999887554322222222 3 2468999999863 344557788889877632 222221 11
Q ss_pred hhHHHhhhc----cc--------CCCC----H----HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 015287 344 SYFEWVQNI----QG--------FMWE----E----EKVNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLG 396 (410)
Q Consensus 344 s~~E~~qn~----~~--------~~w~----~----~~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A 396 (410)
..++.++.+ .. ..|- . .-++..+...+...+.+.+..++..|++..+..-++.
T Consensus 149 ~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 149 SVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp HHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 122333221 11 1121 0 1123344555567788888889999999877665553
No 117
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.84 E-value=0.031 Score=56.26 Aligned_cols=110 Identities=22% Similarity=0.409 Sum_probs=66.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc--c
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL--V 279 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll--~ 279 (410)
++.|++|.|.|+|.+|+.+++.|...|+ +|+ +.|.+ .+.+.+..++.+ ...++.+++- -
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~-v~~r~----------~~ra~~la~~~g-------~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVL-VANRT----------YERAVELARDLG-------GEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEE-EECSS----------HHHHHHHHHHHT-------CEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEE-EEeCC----------HHHHHHHHHHcC-------CceecHHhHHHHh
Confidence 5789999999999999999999999998 776 66764 233323332212 1111112221 1
Q ss_pred cccceEeecccC--Cccccccccc-c------cceEEEecCCCC--CCHHHHHHHHhCCceE--eccc
Q 015287 280 HECDVLVPCALG--GVLNKENAAD-V------KAKFIIEAANHP--TDPEADEILSKKGVVI--LPDI 334 (410)
Q Consensus 280 ~~~DvliPaA~~--~~I~~~na~~-i------~akiIvEgAN~p--~t~~A~~iL~~rGI~v--~PD~ 334 (410)
..+||+|-|.-. ..++.+.... + +-.++++.+. | ++|+ +..-.||.+ +||+
T Consensus 226 ~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~~~---l~~l~~v~l~d~d~l 289 (404)
T 1gpj_A 226 ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN-PRDVEEG---VENIEDVEVRTIDDL 289 (404)
T ss_dssp HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTT---GGGSTTEEEEEHHHH
T ss_pred cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC-CCCCCcc---ccccCCeEEEeHhhH
Confidence 479999998642 2344444443 2 3357788877 5 3543 333456666 5654
No 118
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.84 E-value=0.0064 Score=56.98 Aligned_cols=107 Identities=16% Similarity=0.163 Sum_probs=66.6
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccc
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHE 281 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~ 281 (410)
++.+++|+|.|.|++|+.+++.|.+.|.++|.+.|.+ .+.+.+..++.+ .... +.++++. +
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~----------~~~~~~~~~~~g-------~~~~~~~~~~~~-~ 68 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT----------EESARELAQKVE-------AEYTTDLAEVNP-Y 68 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS----------HHHHHHHHHHTT-------CEEESCGGGSCS-C
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC----------HHHHHHHHHHcC-------CceeCCHHHHhc-C
Confidence 4556799999999999999999999999867688764 344444333312 1111 2334443 7
Q ss_pred cceEeecccCCccccccccc----c-cceEEEecCCCCCCHHHHHHHHhCCc
Q 015287 282 CDVLVPCALGGVLNKENAAD----V-KAKFIIEAANHPTDPEADEILSKKGV 328 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~----i-~akiIvEgAN~p~t~~A~~iL~~rGI 328 (410)
||++|-|.-...+ .+.+.. + .-++|+..+|+.......+.+.+.++
T Consensus 69 ~Dvvi~av~~~~~-~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~~~~ 119 (266)
T 3d1l_A 69 AKLYIVSLKDSAF-AELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPHYGV 119 (266)
T ss_dssp CSEEEECCCHHHH-HHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSSEEE
T ss_pred CCEEEEecCHHHH-HHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHhccC
Confidence 9999999765543 333332 2 34688888887543333334433343
No 119
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.83 E-value=0.094 Score=51.75 Aligned_cols=32 Identities=34% Similarity=0.632 Sum_probs=28.5
Q ss_pred CeEEEEccChHHHHHHHHHHHC---CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH---GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~ 238 (410)
+||+|.|||-+|+.++++|.++ ...||+|.|.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~ 35 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL 35 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC
Confidence 4899999999999999999765 4899999885
No 120
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.80 E-value=0.021 Score=56.14 Aligned_cols=118 Identities=17% Similarity=0.133 Sum_probs=73.5
Q ss_pred CCCchhHHHHHHHHHHH--HH---HhCCCCCCCeEEEEccCh-HHHHHHHHHHHCCCEEEEEECCCCc-eeCCCCCCHHH
Q 015287 180 GREAATGLGVFFATEAL--LA---EHGKSISNMKFAIQGFGN-VGSWAAKFFHEHGGKVVAVSDITGA-IKNPNGIDVPA 252 (410)
Q Consensus 180 gr~~aTg~Gv~~~~~~~--~~---~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~G~-i~~~~GlDi~~ 252 (410)
+-.+.|.+|++..++.. .+ .+|.+++|++++|.|.|+ ||+.+|++|...|++|. |+|.+.. ++...
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVt-v~nR~~~~l~~ra------ 218 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVY-SVDVNNIQKFTRG------ 218 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEE-EECSSEEEEEESC------
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEE-EEeCchHHHHhHH------
Confidence 34579999886555432 00 057789999999999996 69999999999999976 8887632 22111
Q ss_pred HHHHHHhCCCcccCCC-Ceeec-C--Ccccc--cccceEeecccCC--cccccccccccceEEEecCCCC
Q 015287 253 LLKYKKSNKSLNDFQG-GNAMD-L--NDLLV--HECDVLVPCALGG--VLNKENAADVKAKFIIEAANHP 314 (410)
Q Consensus 253 l~~~~~~~g~v~~~~~-~~~i~-~--~~ll~--~~~DvliPaA~~~--~I~~~na~~i~akiIvEgAN~p 314 (410)
..+..... ...++ . +++-+ .++||+|-|.... +|+.+-.+. -.+|++-+-.+
T Consensus 219 --------~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk~--GavVIDVgi~r 278 (320)
T 1edz_A 219 --------ESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKE--GAVCINFACTK 278 (320)
T ss_dssp --------CCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCT--TEEEEECSSSC
T ss_pred --------HHHhhhcccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHHcCC--CeEEEEcCCCc
Confidence 00110000 00111 1 23332 4799999887643 488777653 35777777654
No 121
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.79 E-value=0.014 Score=56.45 Aligned_cols=107 Identities=17% Similarity=0.251 Sum_probs=65.2
Q ss_pred CeEEEEccChHHHHH-HHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-cccce
Q 015287 207 MKFAIQGFGNVGSWA-AKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HECDV 284 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~-a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~Dv 284 (410)
.||+|+|+|++|+.. ++.|.+.+.++++|+|.+ .+.+.+..++.+....| -+.++++. .++|+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~----------~~~~~~~~~~~g~~~~~-----~~~~~~l~~~~~D~ 65 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTS----------AERGAAYATENGIGKSV-----TSVEELVGDPDVDA 65 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSC----------HHHHHHHHHHTTCSCCB-----SCHHHHHTCTTCCE
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCC----------HHHHHHHHHHcCCCccc-----CCHHHHhcCCCCCE
Confidence 479999999999987 777777889999999974 34444444433211111 12346665 47999
Q ss_pred EeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEec
Q 015287 285 LVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVILP 332 (410)
Q Consensus 285 liPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~P 332 (410)
++-|.- +..+.+.+.. + +..+++|- |+ | .++++ ..+++|+.+..
T Consensus 66 V~i~tp-~~~h~~~~~~al~~Gk~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~ 118 (332)
T 2glx_A 66 VYVSTT-NELHREQTLAAIRAGKHVLCEK---PLAMTLEDAREMVVAAREAGVVLGT 118 (332)
T ss_dssp EEECSC-GGGHHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEeCC-hhHhHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 998863 3334333332 2 34578873 42 3 34433 35667876653
No 122
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.79 E-value=0.073 Score=53.03 Aligned_cols=31 Identities=32% Similarity=0.518 Sum_probs=28.8
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEEC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSD 237 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD 237 (410)
.||+|.|||.+|+.++++|.++ ..+||+|.|
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaind 49 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIND 49 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 5999999999999999999876 689999998
No 123
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.74 E-value=0.093 Score=52.78 Aligned_cols=32 Identities=28% Similarity=0.544 Sum_probs=28.5
Q ss_pred CeEEEEccChHHHHHHHHHHHC---CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH---GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~ 238 (410)
.||+|.|||.+|+.+++.|.++ ...||+|.|.
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~ 37 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT 37 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC
Confidence 4899999999999999999876 3899999885
No 124
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.74 E-value=0.028 Score=54.10 Aligned_cols=122 Identities=15% Similarity=0.179 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCc
Q 015287 185 TGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSL 263 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v 263 (410)
-+.|...+++ ..+.+++++++.|.|.|.+|+.++..|.+.|+ +|+ |.+.+.. .. ..+
T Consensus 100 D~~G~~~~L~----~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~-v~~R~~~----------~a-------~~l 157 (277)
T 3don_A 100 DGIGYVNGLK----QIYEGIEDAYILILGAGGASKGIANELYKIVRPTLT-VANRTMS----------RF-------NNW 157 (277)
T ss_dssp HHHHHHHHHH----HHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCE-EECSCGG----------GG-------TTC
T ss_pred hHHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEE-EEeCCHH----------HH-------HHH
Confidence 4667766654 45778999999999999999999999999999 555 7776521 00 011
Q ss_pred ccCCCCeeecCCccc--ccccceEeecccCC---ccccc-ccccc-cceEEEecCCCCC-CHHHHHHHHhCCceEe
Q 015287 264 NDFQGGNAMDLNDLL--VHECDVLVPCALGG---VLNKE-NAADV-KAKFIIEAANHPT-DPEADEILSKKGVVIL 331 (410)
Q Consensus 264 ~~~~~~~~i~~~~ll--~~~~DvliPaA~~~---~I~~~-na~~i-~akiIvEgAN~p~-t~~A~~iL~~rGI~v~ 331 (410)
.. .....+-+++- -.++||+|-|.--+ ..... ....+ ...+|++-.-+|. |+ --+..+++|+.++
T Consensus 158 a~--~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T~-ll~~A~~~G~~~~ 230 (277)
T 3don_A 158 SL--NINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTP-ILIEAEQRGNPIY 230 (277)
T ss_dssp CS--CCEEECHHHHHHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSCH-HHHHHHHTTCCEE
T ss_pred HH--hcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCCH-HHHHHHHCcCEEe
Confidence 10 00111111221 24789999664221 11100 11223 3468999987784 64 4556788998754
No 125
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.73 E-value=0.22 Score=49.37 Aligned_cols=33 Identities=39% Similarity=0.626 Sum_probs=29.9
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
-.||.|-|||.+|+.+++.+.+.|.+||+|-|.
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~veivainDp 39 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKGVKVVAVNDP 39 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eeEEEEECCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 368999999999999999998889999999775
No 126
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.73 E-value=0.013 Score=60.48 Aligned_cols=172 Identities=12% Similarity=0.131 Sum_probs=100.2
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCccccc--ccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLVH--ECD 283 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~~--~~D 283 (410)
++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.+ .+.+.+..++.+. .+... -+.+++... +||
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~-v~dr~----------~~~~~~l~~~~~~----~gi~~~~s~~e~v~~l~~aD 70 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVA-IYNRT----------TSKTEEVFKEHQD----KNLVFTKTLEEFVGSLEKPR 70 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEE-EECSS----------HHHHHHHHHHTTT----SCEEECSSHHHHHHTBCSSC
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEE-EEcCC----------HHHHHHHHHhCcC----CCeEEeCCHHHHHhhccCCC
Confidence 689999999999999999999999875 66653 3444444433210 11111 123344432 599
Q ss_pred eEeecccCCccccccc----cccc-ceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCce---------e----
Q 015287 284 VLVPCALGGVLNKENA----ADVK-AKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGVT---------V---- 343 (410)
Q Consensus 284 vliPaA~~~~I~~~na----~~i~-akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGVi---------~---- 343 (410)
+++-|.-.+....+.+ +.++ -++|+..+|+.. +.+..+.+.++|+.++.- .++||.. .
T Consensus 71 vVilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~--pv~gg~~~a~~g~~i~~gg~~ 148 (474)
T 2iz1_A 71 RIMLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGT--GVSGGEKGALLGPSMMPGGQK 148 (474)
T ss_dssp EEEECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEE--EECSHHHHHHHCCCEEEEECH
T ss_pred EEEEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECC--CCCCChhhhccCCeEEecCCH
Confidence 9998875543222222 2332 368999999862 344556777889887632 2333321 1
Q ss_pred hhHHHhhh----ccc---------CCCCH--------HHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Q 015287 344 SYFEWVQN----IQG---------FMWEE--------EKVNHELKRYMMSAFKDIKTMCQT-HNCNLRMGAFTL 395 (410)
Q Consensus 344 s~~E~~qn----~~~---------~~w~~--------~~v~~~l~~~m~~~~~~v~~~a~~-~~~~~r~aA~~~ 395 (410)
..++.++. ... ..|-. .-++..+...+...+.+.+..+++ .|++..+..-++
T Consensus 149 ~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~ 222 (474)
T 2iz1_A 149 EAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIF 222 (474)
T ss_dssp HHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 12233322 111 11210 123444555567788888888998 799987765554
No 127
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.71 E-value=0.0076 Score=58.88 Aligned_cols=108 Identities=19% Similarity=0.319 Sum_probs=66.8
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-cccce
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HECDV 284 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~Dv 284 (410)
.||+|+|+|++|+..++.|.+. +.++++|+|.+ .+.+.+..++.+.... .-+.++++. .++|+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~~~~~~~~~~-----~~~~~~ll~~~~~D~ 67 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVR----------EDRLREMKEKLGVEKA-----YKDPHELIEDPNVDA 67 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSC----------HHHHHHHHHHHTCSEE-----ESSHHHHHHCTTCCE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCC----------HHHHHHHHHHhCCCce-----eCCHHHHhcCCCCCE
Confidence 5899999999999999988764 78999999974 4444444443221111 123456665 37999
Q ss_pred EeecccCCccccccccc---ccceEEEecCCCC--CC-HHHH---HHHHhCCceEecc
Q 015287 285 LVPCALGGVLNKENAAD---VKAKFIIEAANHP--TD-PEAD---EILSKKGVVILPD 333 (410)
Q Consensus 285 liPaA~~~~I~~~na~~---i~akiIvEgAN~p--~t-~~A~---~iL~~rGI~v~PD 333 (410)
++-|. ++..+.+.+.. -+..++||= | +| .+++ +..+++|+.+...
T Consensus 68 V~i~t-p~~~h~~~~~~al~~gk~v~~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~ 121 (344)
T 3ezy_A 68 VLVCS-STNTHSELVIACAKAKKHVFCEK---PLSLNLADVDRMIEETKKADVILFTG 121 (344)
T ss_dssp EEECS-CGGGHHHHHHHHHHTTCEEEEES---CSCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEcC-CCcchHHHHHHHHhcCCeEEEEC---CCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 99885 44444443332 244688884 3 22 3333 3456777766543
No 128
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.68 E-value=0.0094 Score=58.13 Aligned_cols=106 Identities=12% Similarity=0.182 Sum_probs=67.1
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-cccce
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HECDV 284 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~Dv 284 (410)
.||+|+|+|++|+..++.|.+. +.++++|+|.+ .+.+.+..++.+ +.. .-+.++++. .++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~a~~~g-~~~-----~~~~~~~l~~~~~D~ 68 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPF----------IEGAQRLAEANG-AEA-----VASPDEVFARDDIDG 68 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS----------HHHHHHHHHTTT-CEE-----ESSHHHHTTCSCCCE
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCC----------HHHHHHHHHHcC-Cce-----eCCHHHHhcCCCCCE
Confidence 5899999999999999998875 78999999974 445544444332 211 123356664 57999
Q ss_pred EeecccCCcccccccccc---cceEEEecCCCCC--C-HHHHH---HHHhCCceEec
Q 015287 285 LVPCALGGVLNKENAADV---KAKFIIEAANHPT--D-PEADE---ILSKKGVVILP 332 (410)
Q Consensus 285 liPaA~~~~I~~~na~~i---~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~P 332 (410)
++-|. ++..+.+.+... +..++||- |+ | .++++ ..+++|+.+..
T Consensus 69 V~i~t-p~~~h~~~~~~al~~gk~v~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v 121 (344)
T 3euw_A 69 IVIGS-PTSTHVDLITRAVERGIPALCEK---PIDLDIEMVRACKEKIGDGASKVML 121 (344)
T ss_dssp EEECS-CGGGHHHHHHHHHHTTCCEEECS---CSCSCHHHHHHHHHHHGGGGGGEEE
T ss_pred EEEeC-CchhhHHHHHHHHHcCCcEEEEC---CCCCCHHHHHHHHHHHHhcCCeEEe
Confidence 99885 444444443331 44688885 42 3 34433 45667776553
No 129
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=95.68 E-value=0.034 Score=54.83 Aligned_cols=106 Identities=23% Similarity=0.339 Sum_probs=69.6
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.++.|+|+.|.|+|++|+.+|+.+...|.+|++ .|... - +... +. +....+-+++| ..
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~-~d~~~-------~--~~~~---~~--------~~~~~~l~ell-~~ 194 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLC-YDVVK-------R--EDLK---EK--------GCVYTSLDELL-KE 194 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSSC-------C--HHHH---HT--------TCEECCHHHHH-HH
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCceeee-cCCcc-------c--hhhh---hc--------CceecCHHHHH-hh
Confidence 468899999999999999999999999999984 34321 0 1111 10 12233345555 46
Q ss_pred cceEeecc-----cCCcccccccccccc-eEEEecCCCCC-CHHH-HHHHHhCCce
Q 015287 282 CDVLVPCA-----LGGVLNKENAADVKA-KFIIEAANHPT-DPEA-DEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA-----~~~~I~~~na~~i~a-kiIvEgAN~p~-t~~A-~~iL~~rGI~ 329 (410)
|||++-+. ..+.|+++.....+- -+++--|-+++ ..+| .+.|++.-|.
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~ 250 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred CCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCce
Confidence 88888765 335566666666643 47788888884 5544 3566665553
No 130
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=95.68 E-value=0.1 Score=51.57 Aligned_cols=32 Identities=28% Similarity=0.546 Sum_probs=28.8
Q ss_pred CeEEEEccChHHHHHHHHHHHC----CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH----GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~----GakvVaVsD~ 238 (410)
.||+|-|||.+|+.+++.|.++ ...||+|.|.
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~ 37 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL 37 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC
Confidence 4899999999999999999877 5799999994
No 131
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.67 E-value=0.021 Score=53.76 Aligned_cols=164 Identities=17% Similarity=0.116 Sum_probs=90.4
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEe
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLV 286 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvli 286 (410)
++|+|.|+|++|+.+++.|.+ |.+|+ +.|.+. +.+.+..+.+ + ...+.++.+ .+||+++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~-~~~~~~----------~~~~~~~~~g--~------~~~~~~~~~-~~~D~vi 60 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTL-VWNRTF----------EKALRHQEEF--G------SEAVPLERV-AEARVIF 60 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEE-EECSST----------HHHHHHHHHH--C------CEECCGGGG-GGCSEEE
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEE-EEeCCH----------HHHHHHHHCC--C------cccCHHHHH-hCCCEEE
Confidence 479999999999999999999 99876 666532 3333333221 1 111133444 3799999
Q ss_pred ecccCCcccccc----ccccc-ceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCc----------ee----hh
Q 015287 287 PCALGGVLNKEN----AADVK-AKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGV----------TV----SY 345 (410)
Q Consensus 287 PaA~~~~I~~~n----a~~i~-akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGV----------i~----s~ 345 (410)
-|.-...-..+. .+.++ -++|+.-.|... +.+..+.+.++|+.+++-- +.||. ++ ..
T Consensus 61 ~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p--~~~~~~~~~~g~~~~~~~~~~~~ 138 (289)
T 2cvz_A 61 TCLPTTREVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAP--VSGGTSGAEAGTLTVMLGGPEEA 138 (289)
T ss_dssp ECCSSHHHHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECC--EESHHHHHHHTCEEEEEESCHHH
T ss_pred EeCCChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEec--CCCChhHHhhCCeEEEECCCHHH
Confidence 987544312221 12232 357777777542 2344567788888776432 22221 11 12
Q ss_pred HHHhhhcccC----CCC----HHH----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 015287 346 FEWVQNIQGF----MWE----EEK----VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAF 393 (410)
Q Consensus 346 ~E~~qn~~~~----~w~----~~~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~ 393 (410)
++.++.+-.. .|. ... +...+...+...+.+....+++.|+++.++..
T Consensus 139 ~~~~~~ll~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~ 198 (289)
T 2cvz_A 139 VERVRPFLAYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALE 198 (289)
T ss_dssp HHHHGGGCTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHhhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHH
Confidence 3333332111 111 111 12223334567777888888999998865433
No 132
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.64 E-value=0.025 Score=53.67 Aligned_cols=105 Identities=14% Similarity=0.207 Sum_probs=66.4
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|.|+|++|+.+++.|.+.|.+|+ +.|.+ .+.+.+..+. + + ... +.++++ .+||++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~~~----------~~~~~~~~~~-g-~------~~~~~~~~~~-~~~D~v 64 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVY-AFDLM----------EANVAAVVAQ-G-A------QACENNQKVA-AASDII 64 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEE-EECSS----------HHHHHHHHTT-T-C------EECSSHHHHH-HHCSEE
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEE-EEeCC----------HHHHHHHHHC-C-C------eecCCHHHHH-hCCCEE
Confidence 689999999999999999999999876 66653 3334333322 1 1 111 223333 379999
Q ss_pred eecccCCc-----ccc--ccccccc-ceEEEecCCCC--CCHHHHHHHHhCCceEe
Q 015287 286 VPCALGGV-----LNK--ENAADVK-AKFIIEAANHP--TDPEADEILSKKGVVIL 331 (410)
Q Consensus 286 iPaA~~~~-----I~~--~na~~i~-akiIvEgAN~p--~t~~A~~iL~~rGI~v~ 331 (410)
+-|.-... +.. +-.+.++ -++|+.-+|+. ...+..+.+.++|+.++
T Consensus 65 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 65 FTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 99873322 211 1122232 46888888876 23455667888898876
No 133
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.55 E-value=0.12 Score=50.43 Aligned_cols=133 Identities=16% Similarity=0.188 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcc
Q 015287 185 TGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLN 264 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~ 264 (410)
-+.|...+++ ..+.+++++++.|.|.|.+|+.++..|.+.|++-|.|++.+.. +.+...+..++-+.
T Consensus 131 D~~Gf~~~L~----~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~-------~~~~a~~la~~~~~-- 197 (312)
T 3t4e_A 131 DGTGHIRAIK----ESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDD-------FFEKAVAFAKRVNE-- 197 (312)
T ss_dssp HHHHHHHHHH----HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST-------HHHHHHHHHHHHHH--
T ss_pred cHHHHHHHHH----hcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCc-------hHHHHHHHHHHhhh--
Confidence 3567666654 4578899999999999999999999999999943447776411 12333332221100
Q ss_pred cCCC-CeeecCCcc---c--ccccceEeecccCCc--cccc----ccccc-cceEEEecCCCCC-CHHHHHHHHhCCceE
Q 015287 265 DFQG-GNAMDLNDL---L--VHECDVLVPCALGGV--LNKE----NAADV-KAKFIIEAANHPT-DPEADEILSKKGVVI 330 (410)
Q Consensus 265 ~~~~-~~~i~~~~l---l--~~~~DvliPaA~~~~--I~~~----na~~i-~akiIvEgAN~p~-t~~A~~iL~~rGI~v 330 (410)
.++. ....+.+++ - -.++||+|-|.--+. .+.. ....+ +..+|.+-.-+|. |+ --+.-+++|..+
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~-ll~~A~~~G~~~ 276 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTK-LLQQAQQAGCKT 276 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCH-HHHHHHHTTCEE
T ss_pred ccCcceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCH-HHHHHHHCCCeE
Confidence 0110 012222332 1 137999996653221 1111 11233 3468899999995 54 334456778765
Q ss_pred e
Q 015287 331 L 331 (410)
Q Consensus 331 ~ 331 (410)
+
T Consensus 277 ~ 277 (312)
T 3t4e_A 277 I 277 (312)
T ss_dssp E
T ss_pred E
Confidence 4
No 134
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.52 E-value=0.024 Score=53.71 Aligned_cols=110 Identities=15% Similarity=0.055 Sum_probs=65.0
Q ss_pred CCeEEEEccChHHHHHHHHHHHC--CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEH--GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECD 283 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~D 283 (410)
-++|+|+|+|++|+.+++.|.+. |.+|+ +.|.+ .+.+....+ .+... ....+.++.+ .+||
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d~~----------~~~~~~~~~-~g~~~----~~~~~~~~~~-~~aD 68 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIV-GYNRS----------DRSRDIALE-RGIVD----EATADFKVFA-ALAD 68 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEE-EECSS----------HHHHHHHHH-TTSCS----EEESCTTTTG-GGCS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEE-EEcCC----------HHHHHHHHH-cCCcc----cccCCHHHhh-cCCC
Confidence 36899999999999999999887 56766 56653 333333322 22110 0112334444 4899
Q ss_pred eEeecccCCcccccccc----c-c-cceEEEecCCCCC--CHHHHHHHHhCCceEecc
Q 015287 284 VLVPCALGGVLNKENAA----D-V-KAKFIIEAANHPT--DPEADEILSKKGVVILPD 333 (410)
Q Consensus 284 vliPaA~~~~I~~~na~----~-i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD 333 (410)
++|-|.-...+ .+.+. . + .-.+|+..+|... +....+.+.++++.++|.
T Consensus 69 vVilavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~ 125 (290)
T 3b1f_A 69 VIILAVPIKKT-IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGS 125 (290)
T ss_dssp EEEECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEE
T ss_pred EEEEcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEe
Confidence 99999754433 22222 2 3 2357887777653 233345555558878773
No 135
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=95.51 E-value=0.011 Score=60.84 Aligned_cols=169 Identities=18% Similarity=0.238 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHhhccCCCCcccCCCCCCCHHHHHHHHHHhhhhhCCCCceecCccccCCCCCCCCchhHHHHHHHHHHHH
Q 015287 118 ERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGLGVFFATEALL 197 (410)
Q Consensus 118 e~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m~wi~d~~~~~~g~~~~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~ 197 (410)
+++.+ +++.+.+-.|. |-=.|++... --.+.+.|+.... -|+. .+...-||-=+..++..++
T Consensus 149 defve-~v~~~~P~fG~---InlEDf~ap~--af~il~ryr~~~~--------ipvF----nDD~qGTA~V~lAgllnAl 210 (487)
T 3nv9_A 149 DAVIE-FVQRIQHTFGA---INLEDISQPN--CYKILDVLRESCD--------IPVW----HDDQQGTASVTLAGLLNAL 210 (487)
T ss_dssp HHHHH-HHHHHGGGCSE---EEECSCCTTH--HHHHHHHHHHHCS--------SCEE----ETTTHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHhCCCCCe---ecHhhcCCch--HHHHHHHHHhhcc--------CCcc----ccccchHHHHHHHHHHHHH
Confidence 44443 66666665543 3346666532 2234466654211 1211 1223568877888888999
Q ss_pred HHhCCCCCCCeEEEEccChHHHHHHHHHHHCCC---EEEEEECCCCceeCCCCCCHHHH------HHHHHhCCCcccCCC
Q 015287 198 AEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGG---KVVAVSDITGAIKNPNGIDVPAL------LKYKKSNKSLNDFQG 268 (410)
Q Consensus 198 ~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga---kvVaVsD~~G~i~~~~GlDi~~l------~~~~~~~g~v~~~~~ 268 (410)
+..|.+++..||++.|.|..|-++|++|.+.|. +|+ +.|++|.|+.... |+... .++.+... +.
T Consensus 211 ki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~-l~D~~Gli~~~R~-~l~~~~~~~~k~~~A~~~n-----~~ 283 (487)
T 3nv9_A 211 KLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIV-MFDSKGSLHNGRE-DIKKDTRFYRKWEICETTN-----PS 283 (487)
T ss_dssp HHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEE-EEETTEECCTTCH-HHHHCGGGHHHHHHHHHSC-----TT
T ss_pred HHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEE-EEeccccccCCcc-hhhhhcccHHHHHHHHhcc-----cc
Confidence 988999999999999999999999999999998 566 8999999986441 12111 01111110 00
Q ss_pred CeeecCCcccccccceEeeccc--CCcccccccccccc-eEEEecCCC
Q 015287 269 GNAMDLNDLLVHECDVLVPCAL--GGVLNKENAADVKA-KFIIEAANH 313 (410)
Q Consensus 269 ~~~i~~~~ll~~~~DvliPaA~--~~~I~~~na~~i~a-kiIvEgAN~ 313 (410)
..-+-.|.+. .+||||=++. ++++|++-++...- .||.--||-
T Consensus 284 -~~~~L~eav~-~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNP 329 (487)
T 3nv9_A 284 -KFGSIAEACV-GADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANP 329 (487)
T ss_dssp -CCCSHHHHHT-TCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSS
T ss_pred -cCCCHHHHHh-cCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCC
Confidence 0011123333 3599999884 58999999888744 477777874
No 136
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.50 E-value=0.069 Score=51.17 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcc
Q 015287 185 TGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLN 264 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~ 264 (410)
-+.|...+++. .+ ++++.|.|.|.+|+.++..|.+.|.+|+ |.+.+- + ..++|. +-+
T Consensus 105 D~~Gf~~~L~~----~~----~k~vlvlGaGGaaraia~~L~~~G~~v~-V~nRt~-----~--ka~~la----~~~--- 161 (269)
T 3phh_A 105 DALGFYLSLKQ----KN----YQNALILGAGGSAKALACELKKQGLQVS-VLNRSS-----R--GLDFFQ----RLG--- 161 (269)
T ss_dssp HHHHHHHHCC-----------CCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSC-----T--THHHHH----HHT---
T ss_pred hHHHHHHHHHH----cC----CCEEEEECCCHHHHHHHHHHHHCCCEEE-EEeCCH-----H--HHHHHH----HCC---
Confidence 46777766653 23 8999999999999999999999997776 777652 1 223333 111
Q ss_pred cCCCCeeecCCcccccccceEeecccCC-----cccccccc-cc-cceEEEecCCCCCCHHHHHHHHhCCceEec
Q 015287 265 DFQGGNAMDLNDLLVHECDVLVPCALGG-----VLNKENAA-DV-KAKFIIEAANHPTDPEADEILSKKGVVILP 332 (410)
Q Consensus 265 ~~~~~~~i~~~~ll~~~~DvliPaA~~~-----~I~~~na~-~i-~akiIvEgAN~p~t~~A~~iL~~rGI~v~P 332 (410)
....+.+++- ++||+|-|.--+ .+..+-.. .+ ...+|++-.-+|-|+ --+..+++|+.+++
T Consensus 162 ----~~~~~~~~l~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P~T~-ll~~A~~~G~~~~~ 229 (269)
T 3phh_A 162 ----CDCFMEPPKS--AFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGFLTP-FLSLAKELKTPFQD 229 (269)
T ss_dssp ----CEEESSCCSS--CCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSSCCH-HHHHHHHTTCCEEC
T ss_pred ----CeEecHHHhc--cCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCCchH-HHHHHHHCcCEEEC
Confidence 1223333432 899999554222 23333111 22 346889998888444 55667888887653
No 137
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.50 E-value=0.02 Score=59.13 Aligned_cols=174 Identities=14% Similarity=0.146 Sum_probs=100.5
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcccc--cccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLV--HECD 283 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~--~~~D 283 (410)
++|+|+|.|++|+.+|..|.+.|.+|+ +.|.+ .+.+.+..+... .+ .+... .+.+++.. .++|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~-v~dr~----------~~~~~~l~~~~~--~g-~gi~~~~~~~e~v~~l~~aD 68 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVC-AFNRT----------VSKVDDFLANEA--KG-TKVLGAHSLEEMVSKLKKPR 68 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEE-EECSS----------THHHHHHHHTTT--TT-SSCEECSSHHHHHHHBCSSC
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEE-EEeCC----------HHHHHHHHhccc--cC-CCeEEeCCHHHHHhhccCCC
Confidence 579999999999999999999999876 66653 233433333110 00 11111 12344543 3899
Q ss_pred eEeecccCCcccccccc----ccc-ceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCce-------------e
Q 015287 284 VLVPCALGGVLNKENAA----DVK-AKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGVT-------------V 343 (410)
Q Consensus 284 vliPaA~~~~I~~~na~----~i~-akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGVi-------------~ 343 (410)
++|-|.-...-..+.+. .++ -++|+..+|+.. +.+..+.|.++|+.++.- .++|+.. -
T Consensus 69 vVilaVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~--pv~g~~~~a~~g~~i~~gg~~ 146 (482)
T 2pgd_A 69 RIILLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGS--GVSGGEDGARYGPSLMPGGNK 146 (482)
T ss_dssp EEEECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE--EEESHHHHHHHCCEEEEEECT
T ss_pred EEEEeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCC--CCCCChhhhccCCeEEeCCCH
Confidence 99988655432223222 233 368999999864 334567788889877632 2233221 1
Q ss_pred hhHHHhhh----cccC--------CCC--------HHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHH
Q 015287 344 SYFEWVQN----IQGF--------MWE--------EEKVNHELKRYMMSAFKDIKTMCQTH-NCNLRMGAFTLG 396 (410)
Q Consensus 344 s~~E~~qn----~~~~--------~w~--------~~~v~~~l~~~m~~~~~~v~~~a~~~-~~~~r~aA~~~A 396 (410)
..++.++. .... .|- ..-+...+...+...+.+.+..+++. |++..+..-++.
T Consensus 147 e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~ 220 (482)
T 2pgd_A 147 EAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFE 220 (482)
T ss_dssp TTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 12233322 1111 111 01234445555667888888899998 999877665553
No 138
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=95.50 E-value=0.017 Score=55.95 Aligned_cols=106 Identities=17% Similarity=0.264 Sum_probs=67.6
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-cccce
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HECDV 284 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~Dv 284 (410)
.||+|+|+|++|+..++.|.+. +.++++|+|.+ .+.+.+..++.+ +. | -+.++++. .++|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~~~~~~-~~-~-----~~~~~~l~~~~~D~ 66 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAF----------PAAAEAIAGAYG-CE-V-----RTIDAIEAAADIDA 66 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS----------HHHHHHHHHHTT-CE-E-----CCHHHHHHCTTCCE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCC----------HHHHHHHHHHhC-CC-c-----CCHHHHhcCCCCCE
Confidence 5899999999999999999874 89999999974 444444444422 21 2 23456664 37999
Q ss_pred EeecccCCcccccccccc---cceEEEecCCCCC--C-HHHH---HHHHhCCceEecc
Q 015287 285 LVPCALGGVLNKENAADV---KAKFIIEAANHPT--D-PEAD---EILSKKGVVILPD 333 (410)
Q Consensus 285 liPaA~~~~I~~~na~~i---~akiIvEgAN~p~--t-~~A~---~iL~~rGI~v~PD 333 (410)
++-|. ++..+.+.+... +..++||- |+ | .+++ +..+++|+.+...
T Consensus 67 V~i~t-p~~~h~~~~~~al~~gk~v~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 67 VVICT-PTDTHADLIERFARAGKAIFCEK---PIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp EEECS-CGGGHHHHHHHHHHTTCEEEECS---CSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEEeC-CchhHHHHHHHHHHcCCcEEEec---CCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 98875 444444433321 44688885 42 3 3343 3456778776543
No 139
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.47 E-value=0.049 Score=55.25 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=32.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITG 240 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G 240 (410)
+.+.+|+|.|+|.+|..+++.+...|++|+ +.|.+.
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~-v~D~~~ 223 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVS-ATDVRP 223 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSST
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEcCCH
Confidence 678999999999999999999999999987 778753
No 140
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.44 E-value=0.057 Score=50.17 Aligned_cols=97 Identities=14% Similarity=0.136 Sum_probs=59.1
Q ss_pred CeEEEEccChHHHHHHHHHHHCC-CEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcccccccce
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHG-GKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLVHECDV 284 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~G-akvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~~~~Dv 284 (410)
++|+|.|.|++|+.+++.|.+.| ..|+ +.|.+ .+.+.+..++.+ ... -+.++.+ +||+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~-~~~r~----------~~~~~~~~~~~g-------~~~~~~~~~~~--~~D~ 60 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIY-IANRG----------AEKRERLEKELG-------VETSATLPELH--SDDV 60 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEE-EECSS----------HHHHHHHHHHTC-------CEEESSCCCCC--TTSE
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEE-EECCC----------HHHHHHHHHhcC-------CEEeCCHHHHh--cCCE
Confidence 47999999999999999999999 8876 66653 344444433312 111 2344555 8999
Q ss_pred EeecccCCcccccccccc--cceEEEecCCCCCCHHHHHHHH
Q 015287 285 LVPCALGGVLNKENAADV--KAKFIIEAANHPTDPEADEILS 324 (410)
Q Consensus 285 liPaA~~~~I~~~na~~i--~akiIvEgAN~p~t~~A~~iL~ 324 (410)
+|-|.-.. ...+.+..+ +-++|+.-+|+-......+.+.
T Consensus 61 vi~~v~~~-~~~~v~~~l~~~~~ivv~~~~g~~~~~l~~~~~ 101 (263)
T 1yqg_A 61 LILAVKPQ-DMEAACKNIRTNGALVLSVAAGLSVGTLSRYLG 101 (263)
T ss_dssp EEECSCHH-HHHHHHTTCCCTTCEEEECCTTCCHHHHHHHTT
T ss_pred EEEEeCch-hHHHHHHHhccCCCEEEEecCCCCHHHHHHHcC
Confidence 99887522 222222222 2468888766543333344444
No 141
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.42 E-value=0.15 Score=50.50 Aligned_cols=32 Identities=31% Similarity=0.584 Sum_probs=28.8
Q ss_pred CeEEEEccChHHHHHHHHHHH---C-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHE---H-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~---~-GakvVaVsD~ 238 (410)
.||+|.|||.+|+.+++.|.+ + ...||+|.|.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~ 38 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL 38 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC
Confidence 489999999999999999987 4 7899999885
No 142
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.40 E-value=0.21 Score=50.97 Aligned_cols=183 Identities=15% Similarity=0.199 Sum_probs=95.2
Q ss_pred HhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCccc---------CCCC
Q 015287 199 EHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLND---------FQGG 269 (410)
Q Consensus 199 ~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~---------~~~~ 269 (410)
.+++..+-++|+|.|.|.||..+|..|.+ |.+|+ +.|.+ .+.+.+..+..-.+.+ -.+.
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~-~~D~~----------~~~v~~l~~g~~~i~e~~l~~ll~~~~~~ 96 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVV-ALDIV----------QAKVDMLNQKISPIVDKEIQEYLAEKPLN 96 (432)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHHT-TSEEE-EECSC----------HHHHHHHHTTCCSSCCHHHHHHHHHSCCC
T ss_pred ccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEE-EEecC----------HHHhhHHhccCCccccccHHHHHhhccCC
Confidence 34455566799999999999999999987 99998 55654 2222222211000000 0011
Q ss_pred eeecC--CcccccccceEeecccCCccccc---------------ccccc--cceEEEecCCCC-CCHHHHHHHHhCCce
Q 015287 270 NAMDL--NDLLVHECDVLVPCALGGVLNKE---------------NAADV--KAKFIIEAANHP-TDPEADEILSKKGVV 329 (410)
Q Consensus 270 ~~i~~--~~ll~~~~DvliPaA~~~~I~~~---------------na~~i--~akiIvEgAN~p-~t~~A~~iL~~rGI~ 329 (410)
-..+. ++. -.+||++|-|.-. ..+.+ -++ + .+-+|.+..-.| +|.+..+.+.+.++.
T Consensus 97 l~~ttd~~ea-~~~aDvViiaVPt-~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v~ 173 (432)
T 3pid_A 97 FRATTDKHDA-YRNADYVIIATPT-DYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNVI 173 (432)
T ss_dssp EEEESCHHHH-HTTCSEEEECCCC-EEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCEE
T ss_pred eEEEcCHHHH-HhCCCEEEEeCCC-ccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccEe
Confidence 11111 122 2479999988533 22211 111 2 233555555555 466777888899999
Q ss_pred EeccccccccCc----------eeh----hHHHhhh-cc------c--CCC-C--HHHHH----HHHHHHHHHHHHHHHH
Q 015287 330 ILPDIYANSGGV----------TVS----YFEWVQN-IQ------G--FMW-E--EEKVN----HELKRYMMSAFKDIKT 379 (410)
Q Consensus 330 v~PD~laNaGGV----------i~s----~~E~~qn-~~------~--~~w-~--~~~v~----~~l~~~m~~~~~~v~~ 379 (410)
+.|.++. -|.. ++. .++-+.. +. + ... + ..|.. .-+.......++++..
T Consensus 174 ~sPe~~~-~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~ 252 (432)
T 3pid_A 174 FSPEFLR-EGRALYDNLHPSRIVIGERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDS 252 (432)
T ss_dssp ECCCCCC-TTSHHHHHHSCSCEEESSCSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCccCC-cchhhhcccCCceEEecCCHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998863 3332 111 1111111 00 0 001 1 11221 1222223355688889
Q ss_pred HHHHcCCCHHHHHHHHHH
Q 015287 380 MCQTHNCNLRMGAFTLGV 397 (410)
Q Consensus 380 ~a~~~~~~~r~aA~~~A~ 397 (410)
.|++.|++..+....++.
T Consensus 253 lae~~GiD~~~v~~~~~~ 270 (432)
T 3pid_A 253 YAESQGLNSKQIIEGVCL 270 (432)
T ss_dssp HHHHTTCCHHHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHcc
Confidence 999999999887766543
No 143
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.34 E-value=0.13 Score=50.84 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=28.8
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
.||+|.|||-+|+.++++|.++ ...||+|.|.
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~ 34 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL 34 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 4899999999999999999876 6899999985
No 144
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.32 E-value=0.021 Score=45.72 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=29.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCC-CEEEEEECCC
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHG-GKVVAVSDIT 239 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~G-akvVaVsD~~ 239 (410)
.+++|+|.|.|.+|+.+++.|.+.| .+|+ +.|.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~-~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVT-VADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEE-EEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEE-EEeCC
Confidence 4579999999999999999999999 7776 56653
No 145
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=95.31 E-value=0.027 Score=58.55 Aligned_cols=172 Identities=15% Similarity=0.167 Sum_probs=100.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHH-hCCCcccCCCCee-ecCCccccc--cc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKK-SNKSLNDFQGGNA-MDLNDLLVH--EC 282 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~-~~g~v~~~~~~~~-i~~~~ll~~--~~ 282 (410)
.+|.|+|.|++|+.+|+.|.+.|.+|+ +.|.+ .+.+.+..+ +.+ + .+... -+.+++... +|
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~-v~dr~----------~~~~~~l~~~~~~---~-~gi~~~~s~~e~v~~l~~a 75 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVC-AYNRT----------QSKVDHFLANEAK---G-KSIIGATSIEDFISKLKRP 75 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEE-EECSS----------SHHHHHHHHTTTT---T-SSEECCSSHHHHHHTSCSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEE-EEeCC----------HHHHHHHHccccc---C-CCeEEeCCHHHHHhcCCCC
Confidence 589999999999999999999999886 66654 234444333 111 0 01111 122344332 49
Q ss_pred ceEeecccCCccccccc----cccc-ceEEEecCCCCC--CHHHHHHHHhCCceEeccccccccCc---------e----
Q 015287 283 DVLVPCALGGVLNKENA----ADVK-AKFIIEAANHPT--DPEADEILSKKGVVILPDIYANSGGV---------T---- 342 (410)
Q Consensus 283 DvliPaA~~~~I~~~na----~~i~-akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD~laNaGGV---------i---- 342 (410)
|++|-|--.+....+.+ +.++ -++|+..+|... +.+..+.|.++|+.++.- .-+||. +
T Consensus 76 DvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~--pVsgg~~~a~~G~~im~gg~ 153 (497)
T 2p4q_A 76 RKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGS--GVSGGEEGARYGPSLMPGGS 153 (497)
T ss_dssp CEEEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE--EEESHHHHHHHCCEEEEEEC
T ss_pred CEEEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCC--CcccChhHhhcCCeEEecCC
Confidence 99998865543222222 3333 369999999863 344556788899987632 112221 1
Q ss_pred ehhHHHhhh----ccc-------CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Q 015287 343 VSYFEWVQN----IQG-------FMWE--------EEKVNHELKRYMMSAFKDIKTMCQT-HNCNLRMGAFTL 395 (410)
Q Consensus 343 ~s~~E~~qn----~~~-------~~w~--------~~~v~~~l~~~m~~~~~~v~~~a~~-~~~~~r~aA~~~ 395 (410)
-..+|.++. +.. ..|- -.-++..+...+...+.+.+..+++ .|+++.+..-++
T Consensus 154 ~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 154 EEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVF 226 (497)
T ss_dssp GGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 122333332 111 1121 1223455555667888888899999 699988776655
No 146
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=95.30 E-value=0.052 Score=52.99 Aligned_cols=113 Identities=18% Similarity=0.203 Sum_probs=68.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccccc
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHEC 282 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~ 282 (410)
...++++|.|.|..|+..++.|.+ .+.+.|.|.|.+ .+...+..++-+.. .. ....-+.++.+ ++
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~----------~~~a~~la~~~~~~-~~-~~~~~~~~e~v--~a 188 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR----------EKAAKKFVSYCEDR-GI-SASVQPAEEAS--RC 188 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS----------HHHHHHHHHHHHHT-TC-CEEECCHHHHT--SS
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC----------HHHHHHHHHHHHhc-Cc-eEEECCHHHHh--CC
Confidence 467899999999999999998876 466667788874 44444443321100 01 11111223455 79
Q ss_pred ceEeecccCC--cccccccccccceEEEecCCCCCCHHHHHHHHhCCceEe
Q 015287 283 DVLVPCALGG--VLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVIL 331 (410)
Q Consensus 283 DvliPaA~~~--~I~~~na~~i~akiIvEgAN~p~t~~A~~iL~~rGI~v~ 331 (410)
||++-|.... .++.+..+ =.+.+++.|+..|-..|.+..+.+++..|+
T Consensus 189 DvVi~aTp~~~pv~~~~~l~-~G~~V~~ig~~~p~~~el~~~~~~~a~v~v 238 (322)
T 1omo_A 189 DVLVTTTPSRKPVVKAEWVE-EGTHINAIGADGPGKQELDVEILKKAKIVV 238 (322)
T ss_dssp SEEEECCCCSSCCBCGGGCC-TTCEEEECSCCSTTCCCBCHHHHHTEEEEE
T ss_pred CEEEEeeCCCCceecHHHcC-CCeEEEECCCCCCCccccCHHHHhcCeEEE
Confidence 9999887532 33322222 256788899998876665555556665444
No 147
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.25 E-value=0.018 Score=56.93 Aligned_cols=81 Identities=23% Similarity=0.192 Sum_probs=54.2
Q ss_pred CeEEEEccChHHHHHHHHHHHC---------CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH---------GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDL 277 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~---------GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~l 277 (410)
.+|+|.|+|+||+.+++.|.+. +.+|++|+|++- .++.+++.. ...-+.+++
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~--~~~~~~~~~-----------------~~~~d~~~l 64 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDP--RKPRAIPQE-----------------LLRAEPFDL 64 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCT--TSCCSSCGG-----------------GEESSCCCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCH--HHhhccCcc-----------------cccCCHHHH
Confidence 5899999999999999999765 579999999862 233333210 011245677
Q ss_pred cccccceEeecccCCcccccccc-cc--cceEEE
Q 015287 278 LVHECDVLVPCALGGVLNKENAA-DV--KAKFII 308 (410)
Q Consensus 278 l~~~~DvliPaA~~~~I~~~na~-~i--~akiIv 308 (410)
+ ++|+++.|.-......+.+. .+ +..+|+
T Consensus 65 l--~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 65 L--EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp T--TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred h--CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 7 99999999654433333433 23 445777
No 148
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.25 E-value=0.021 Score=55.92 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=68.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc-ccccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL-VHECD 283 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll-~~~~D 283 (410)
..||+|+|+|++|+..++.|.+. ++++++|+|.+ .+.+.+..++.+ +..| -+.++++ ..++|
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~----------~~~~~~~~~~~g-~~~~-----~~~~~~l~~~~~D 68 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRT----------EDKREKFGKRYN-CAGD-----ATMEALLAREDVE 68 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSS----------HHHHHHHHHHHT-CCCC-----SSHHHHHHCSSCC
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCC----------HHHHHHHHHHcC-CCCc-----CCHHHHhcCCCCC
Confidence 36899999999999999999876 89999999974 445544444322 2112 2335666 35799
Q ss_pred eEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEec
Q 015287 284 VLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVILP 332 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~P 332 (410)
+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+..
T Consensus 69 ~V~i~t-p~~~h~~~~~~al~~gk~vl~EK---P~~~~~~~~~~l~~~a~~~~~~~~v 122 (354)
T 3db2_A 69 MVIITV-PNDKHAEVIEQCARSGKHIYVEK---PISVSLDHAQRIDQVIKETGVKFLC 122 (354)
T ss_dssp EEEECS-CTTSHHHHHHHHHHTTCEEEEES---SSCSSHHHHHHHHHHHHHHCCCEEE
T ss_pred EEEEeC-ChHHHHHHHHHHHHcCCEEEEcc---CCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 999775 44445444433 2 44688885 42 3 34443 45677876653
No 149
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.22 E-value=0.049 Score=51.61 Aligned_cols=168 Identities=19% Similarity=0.271 Sum_probs=92.4
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|.|.|++|+.+++.|.+.|.+|+ +.|.+ .+.+.+..+. + + ... +.++++ .+||++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~~~----------~~~~~~~~~~-g-~------~~~~~~~~~~-~~~D~v 65 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLV-VSDRN----------PEAIADVIAA-G-A------ETASTAKAIA-EQCDVI 65 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHHT-T-C------EECSSHHHHH-HHCSEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEE-EEeCC----------HHHHHHHHHC-C-C------eecCCHHHHH-hCCCEE
Confidence 589999999999999999999999875 66653 3344333332 1 1 111 222333 379999
Q ss_pred eecccCCcccccc-------cccc-cceEEEecCCCCC--CHHHHHHHHhCCceEecc-cccc-----ccCce--e----
Q 015287 286 VPCALGGVLNKEN-------AADV-KAKFIIEAANHPT--DPEADEILSKKGVVILPD-IYAN-----SGGVT--V---- 343 (410)
Q Consensus 286 iPaA~~~~I~~~n-------a~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~PD-~laN-----aGGVi--~---- 343 (410)
+-|.-...-.+.. .+.+ .-++|+.-+|+.. +.+..+.+.++|+.++.- +..+ .|++. +
T Consensus 66 i~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~ 145 (299)
T 1vpd_A 66 ITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDK 145 (299)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCH
T ss_pred EEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCH
Confidence 9887422211111 1223 2358888888763 244556788889876521 1111 12221 1
Q ss_pred hhHHHhhhc-c--c--CCC----CHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 015287 344 SYFEWVQNI-Q--G--FMW----EEEKV----NHELKRYMMSAFKDIKTMCQTHNCNLRMGAFT 394 (410)
Q Consensus 344 s~~E~~qn~-~--~--~~w----~~~~v----~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~ 394 (410)
..++.++.+ . + ..+ ..... +.-+...+...+.+....+++.|+++.++.-.
T Consensus 146 ~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~ 209 (299)
T 1vpd_A 146 AIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQA 209 (299)
T ss_dssp HHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 122333221 0 0 011 11111 22233344567777888889999988665444
No 150
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.21 E-value=0.056 Score=51.07 Aligned_cols=81 Identities=16% Similarity=0.116 Sum_probs=55.7
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccce
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDV 284 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dv 284 (410)
+||+|.|+ |.+|+.+++.+.+. +.+++++.|... | .++++..++|+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~--------d------------------------l~~~~~~~~Dv 48 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD--------P------------------------LSLLTDGNTEV 48 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC--------C------------------------THHHHHTTCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC--------C------------------------HHHHhccCCcE
Confidence 47999996 99999999998765 899999998630 1 12333447899
Q ss_pred EeecccCCccccccccc---ccceEEEecCCCCCCHHHHHH
Q 015287 285 LVPCALGGVLNKENAAD---VKAKFIIEAANHPTDPEADEI 322 (410)
Q Consensus 285 liPaA~~~~I~~~na~~---i~akiIvEgAN~p~t~~A~~i 322 (410)
+|.++.+..+ .+|+.. -+..+|++-. + .+++-.+.
T Consensus 49 vIDfT~p~a~-~~~~~~a~~~g~~~VigTT-G-~~~e~~~~ 86 (245)
T 1p9l_A 49 VIDFTHPDVV-MGNLEFLIDNGIHAVVGTT-G-FTAERFQQ 86 (245)
T ss_dssp EEECSCTTTH-HHHHHHHHHTTCEEEECCC-C-CCHHHHHH
T ss_pred EEEccChHHH-HHHHHHHHHcCCCEEEcCC-C-CCHHHHHH
Confidence 9998866544 445433 3667888755 3 56653333
No 151
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.11 E-value=0.042 Score=51.12 Aligned_cols=104 Identities=16% Similarity=0.145 Sum_probs=62.6
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEe
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLV 286 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvli 286 (410)
++|+|+|+|++|+.+++.|.+.|..|. +.|.+ .+.+.+..++.+ +..+ -+.++++. ++|+++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~-~~~~~----------~~~~~~~~~~~g-~~~~-----~~~~~~~~-~~D~Vi 65 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELI-ISGSS----------LERSKEIAEQLA-LPYA-----MSHQDLID-QVDLVI 65 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEE-EECSS----------HHHHHHHHHHHT-CCBC-----SSHHHHHH-TCSEEE
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEE-EECCC----------HHHHHHHHHHcC-CEee-----CCHHHHHh-cCCEEE
Confidence 589999999999999999999897654 77763 344444333212 1111 12234443 899999
Q ss_pred ecccCCcccccccccc-cceEEEecCCCCCCHHHHHHHHhCCceE
Q 015287 287 PCALGGVLNKENAADV-KAKFIIEAANHPTDPEADEILSKKGVVI 330 (410)
Q Consensus 287 PaA~~~~I~~~na~~i-~akiIvEgAN~p~t~~A~~iL~~rGI~v 330 (410)
-|.- .....+.+..+ .-++|++-.++-...+..+.+. ++..+
T Consensus 66 ~~v~-~~~~~~v~~~l~~~~~vv~~~~~~~~~~l~~~~~-~~~~~ 108 (259)
T 2ahr_A 66 LGIK-PQLFETVLKPLHFKQPIISMAAGISLQRLATFVG-QDLPL 108 (259)
T ss_dssp ECSC-GGGHHHHHTTSCCCSCEEECCTTCCHHHHHHHHC-TTSCE
T ss_pred EEeC-cHhHHHHHHHhccCCEEEEeCCCCCHHHHHHhcC-CCCCE
Confidence 9875 33333444444 3358888877644344445443 45433
No 152
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=95.08 E-value=0.053 Score=52.58 Aligned_cols=108 Identities=20% Similarity=0.290 Sum_probs=66.9
Q ss_pred CCCeEEEEccChHHHHHHHHHH-H-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc-c
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFH-E-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV-H 280 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~-~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~-~ 280 (410)
+-.+|+|+|+|++|...++.|. + .++++|+|+|.+ .+.+.+..++.+. .... +.++++. .
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~----------~~~~~~~a~~~g~------~~~~~~~~~~l~~~ 70 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALD----------SNQLEWAKNELGV------ETTYTNYKDMIDTE 70 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSC----------HHHHHHHHHTTCC------SEEESCHHHHHTTS
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCC----------HHHHHHHHHHhCC------CcccCCHHHHhcCC
Confidence 3468999999999999998887 4 478999999974 3444444443221 1112 2345665 4
Q ss_pred ccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHHH---HHhC-CceEec
Q 015287 281 ECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADEI---LSKK-GVVILP 332 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~i---L~~r-GI~v~P 332 (410)
++|+++-|. ++..+.+.+.. + +..+++|- |+ + .+++++ .+++ |+.+..
T Consensus 71 ~~D~V~i~t-p~~~h~~~~~~al~~G~~v~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~~ 128 (346)
T 3cea_A 71 NIDAIFIVA-PTPFHPEMTIYAMNAGLNVFCEK---PLGLDFNEVDEMAKVIKSHPNQIFQS 128 (346)
T ss_dssp CCSEEEECS-CGGGHHHHHHHHHHTTCEEEECS---CCCSCHHHHHHHHHHHHTCTTSCEEC
T ss_pred CCCEEEEeC-ChHhHHHHHHHHHHCCCEEEEcC---CCCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 799999885 44444444333 2 34577863 43 3 344443 3567 877653
No 153
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=95.05 E-value=0.042 Score=53.36 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=69.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-ccc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HEC 282 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~ 282 (410)
+-.||+|+|+|++|...++.|.+ .+.++++|+|.+ .+.+.+..++.+....| -+.++++. .++
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~~~~~~~~~~~-----~~~~~ll~~~~~ 68 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRR----------LENAQKMAKELAIPVAY-----GSYEELCKDETI 68 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSS----------SHHHHHHHHHTTCCCCB-----SSHHHHHHCTTC
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCC----------HHHHHHHHHHcCCCcee-----CCHHHHhcCCCC
Confidence 44689999999999999999987 478999999975 34444444443211111 23356664 479
Q ss_pred ceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEecc
Q 015287 283 DVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVILPD 333 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~PD 333 (410)
|+++-|. ++..+.+.+.. + +..++||- |+ | .++++ ..+++|+.+...
T Consensus 69 D~V~i~t-p~~~h~~~~~~al~~gk~vl~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 69 DIIYIPT-YNQGHYSAAKLALSQGKPVLLEK---PFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp SEEEECC-CGGGHHHHHHHHHHTTCCEEECS---SCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEEEcC-CCHHHHHHHHHHHHCCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 9998775 44444444333 2 44588885 42 3 34443 456778776543
No 154
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=95.03 E-value=0.025 Score=55.50 Aligned_cols=110 Identities=15% Similarity=0.237 Sum_probs=69.8
Q ss_pred CCCCeEEEEccChHHH-HHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-c
Q 015287 204 ISNMKFAIQGFGNVGS-WAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-H 280 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~ 280 (410)
++-.||+|+|+|++|+ ..++.|.+. +++|++|+|.+ .+...+..++.+ +. ..-+.++++. .
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~a~~~g-~~-----~~~~~~~ll~~~ 88 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRR----------WDRAKRFTERFG-GE-----PVEGYPALLERD 88 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESS----------HHHHHHHHHHHC-SE-----EEESHHHHHTCT
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCC----------HHHHHHHHHHcC-CC-----CcCCHHHHhcCC
Confidence 3457999999999998 678888776 89999999974 344444444322 11 1123456774 4
Q ss_pred ccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEecc
Q 015287 281 ECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVILPD 333 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~PD 333 (410)
++|+++-|. .+..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+...
T Consensus 89 ~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EK---P~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 89 DVDAVYVPL-PAVLHAEWIDRALRAGKHVLAEK---PLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp TCSEEEECC-CGGGHHHHHHHHHHTTCEEEEES---SSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECC-CcHHHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 799999874 45555544433 2 44688884 42 2 34443 466788876543
No 155
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.01 E-value=0.019 Score=56.21 Aligned_cols=107 Identities=18% Similarity=0.296 Sum_probs=68.2
Q ss_pred CCCeEEEEccChHHHHHHHHHHHC--CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-cc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEH--GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HE 281 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~ 281 (410)
+-.||+|+|+|++|+..++.|.+. +.++++|+|.+ .+.+.+..++.+ +..| -+.++++. .+
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~----------~~~~~~~~~~~~-~~~~-----~~~~~ll~~~~ 75 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDID----------PAALKAAVERTG-ARGH-----ASLTDMLAQTD 75 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSS----------HHHHHHHHHHHC-CEEE-----SCHHHHHHHCC
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCC----------HHHHHHHHHHcC-Ccee-----CCHHHHhcCCC
Confidence 346899999999999999988876 89999999974 455554444432 2111 23456775 57
Q ss_pred cceEeecccCCcccccccccc---cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 282 CDVLVPCALGGVLNKENAADV---KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~i---~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+|+++-|. ++..+.+.+... +..++||= |+ | .++++ ..+++|+.+.
T Consensus 76 ~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EK---P~a~~~~~~~~l~~~a~~~g~~~~ 130 (354)
T 3q2i_A 76 ADIVILTT-PSGLHPTQSIECSEAGFHVMTEK---PMATRWEDGLEMVKAADKAKKHLF 130 (354)
T ss_dssp CSEEEECS-CGGGHHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCEEEECC-CcHHHHHHHHHHHHCCCCEEEeC---CCcCCHHHHHHHHHHHHHhCCeEE
Confidence 99999775 444444443321 44688874 42 3 34433 4566777654
No 156
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=94.97 E-value=0.025 Score=55.57 Aligned_cols=108 Identities=18% Similarity=0.270 Sum_probs=69.0
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc-cccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV-HECD 283 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~-~~~D 283 (410)
.+|+|+|+|++|+..++.|.+. +.++++|+|.+ .+...+..++.+- . +..... +.++++. .++|
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~----------~~~~~~~a~~~~~-~--~~~~~~~~~~~ll~~~~~D 73 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRS----------LEKAKAFATANNY-P--ESTKIHGSYESLLEDPEID 73 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSS----------HHHHHHHHHHTTC-C--TTCEEESSHHHHHHCTTCC
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCC----------HHHHHHHHHHhCC-C--CCCeeeCCHHHHhcCCCCC
Confidence 6899999999999999888774 68999999974 4444444444321 0 011222 3356775 4799
Q ss_pred eEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 284 VLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 74 ~V~i~t-p~~~h~~~~~~al~aGk~V~~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 74 ALYVPL-PTSLHVEWAIKAAEKGKHILLEK---PVAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp EEEECC-CGGGHHHHHHHHHTTTCEEEECS---SCSSSHHHHHHHHHHHHTTTCCEE
T ss_pred EEEEcC-ChHHHHHHHHHHHHCCCeEEEec---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 999885 55555555443 2 44688874 43 3 34444 4567888765
No 157
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.90 E-value=0.34 Score=46.21 Aligned_cols=128 Identities=20% Similarity=0.221 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCccc
Q 015287 186 GLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLND 265 (410)
Q Consensus 186 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~ 265 (410)
+.|...+ +++.|.+++++++.|.|.|..++.++-.|.+.|++-|.|++.+ .++..+..+.-+ ..
T Consensus 109 ~~Gf~~~----L~~~g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt----------~~ra~~la~~~~--~~ 172 (269)
T 3tum_A 109 GAGFLGA----AHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS----------TARMGAVCELLG--NG 172 (269)
T ss_dssp HHHHHHH----HHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC----------HHHHHHHHHHHH--HH
T ss_pred hHHHHHH----HHHhCCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC----------HHHHHHHHHHHh--cc
Confidence 4565544 4566888999999999999999999999999998666688864 333333222111 01
Q ss_pred CCCCeeecCCcccccccceEeecccCCc-------cccccccccc-ceEEEecCCCCC-CHHHHHHHHhCCceEe
Q 015287 266 FQGGNAMDLNDLLVHECDVLVPCALGGV-------LNKENAADVK-AKFIIEAANHPT-DPEADEILSKKGVVIL 331 (410)
Q Consensus 266 ~~~~~~i~~~~ll~~~~DvliPaA~~~~-------I~~~na~~i~-akiIvEgAN~p~-t~~A~~iL~~rGI~v~ 331 (410)
++........+ --.++|++|-|.--+. ++..-...++ ..+|.+-.-+|. ||= -+.-+++|..++
T Consensus 173 ~~~~~~~~~~~-~~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~P~~T~l-l~~A~~~G~~~~ 245 (269)
T 3tum_A 173 FPGLTVSTQFS-GLEDFDLVANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSPEITPL-LNRARQVGCRIQ 245 (269)
T ss_dssp CTTCEEESCCS-CSTTCSEEEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCSSSSCHH-HHHHHHHTCEEE
T ss_pred CCcceehhhhh-hhhcccccccCCccccCCCCCCCCChHHHhccCCCcEEEEEccCCCCCHH-HHHHHHCcCEEE
Confidence 22211111111 1246899997763221 1111122233 358889998885 553 334566777654
No 158
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.90 E-value=0.053 Score=52.44 Aligned_cols=108 Identities=14% Similarity=0.203 Sum_probs=64.6
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECD 283 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~D 283 (410)
.++|+|+|+|++|+.+|+.|.+.|. +|+ +.|.+- +.+.+ +...+.+ .... ++.+++ .+||
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~-~~dr~~--------~~~~~-~~~~~~g-------~~~~~~~~e~~-~~aD 85 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMA-AYDAAS--------AESWR-PRAEELG-------VSCKASVAEVA-GECD 85 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEE-EECSSC--------HHHHH-HHHHHTT-------CEECSCHHHHH-HHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEE-EEcCCC--------CHHHH-HHHHHCC-------CEEeCCHHHHH-hcCC
Confidence 4799999999999999999999999 776 667631 11222 2222222 1111 222333 4799
Q ss_pred eEeecccCCccccccccc----c-cceEEEecCCCC--CCHHHHHHHHhC--CceEec
Q 015287 284 VLVPCALGGVLNKENAAD----V-KAKFIIEAANHP--TDPEADEILSKK--GVVILP 332 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~----i-~akiIvEgAN~p--~t~~A~~iL~~r--GI~v~P 332 (410)
++|-|--.....+ .+.. + .-++|+...+.. ++.+..+.+.++ |+.++.
T Consensus 86 vVi~~vp~~~~~~-~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 86 VIFSLVTAQAALE-VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp EEEECSCTTTHHH-HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEecCchhHHH-HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 9998865443322 2222 3 235777766544 234445677788 887763
No 159
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.87 E-value=0.034 Score=47.79 Aligned_cols=37 Identities=32% Similarity=0.392 Sum_probs=30.7
Q ss_pred CCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 201 GKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 201 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
-..+.+++|+|.|+|.+|+.+++.|.+.|.+|+ +.|.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~-vid~ 50 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVV-VVDK 50 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEE-EEEC
Confidence 345778999999999999999999999999988 4454
No 160
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.83 E-value=0.018 Score=55.27 Aligned_cols=106 Identities=18% Similarity=0.176 Sum_probs=61.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHH-HCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-eecCCcccccc
Q 015287 205 SNMKFAIQGF-GNVGSWAAKFFH-EHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-AMDLNDLLVHE 281 (410)
Q Consensus 205 ~g~~vaIqGf-GnVG~~~a~~L~-~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-~i~~~~ll~~~ 281 (410)
+.+||+|.|+ |.+|+.+++.+. ..+.++|++.|.+..-. .|-|+.++. .+..+ +.. .-+.++++. +
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~--~g~d~~~~~-------g~~~~-~v~~~~dl~~~l~-~ 72 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LGSDAGELA-------GAGKT-GVTVQSSLDAVKD-D 72 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CSCCTTCSS-------SSSCC-SCCEESCSTTTTT-S
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhh--hhhhHHHHc-------CCCcC-CceecCCHHHHhc-C
Confidence 4479999998 999999999876 56899999999753110 133321110 01000 111 112345664 8
Q ss_pred cceEeecccCCccccccccc---ccceEEEecCCCCCCHHHHHHHH
Q 015287 282 CDVLVPCALGGVLNKENAAD---VKAKFIIEAANHPTDPEADEILS 324 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~---i~akiIvEgAN~p~t~~A~~iL~ 324 (410)
+|++|.++.+.. +.+|+.. -+..+|++-. .++++-.+.|.
T Consensus 73 ~DvVIDft~p~~-~~~~~~~a~~~G~~vVigTt--G~~~e~~~~L~ 115 (273)
T 1dih_A 73 FDVFIDFTRPEG-TLNHLAFCRQHGKGMVIGTT--GFDEAGKQAIR 115 (273)
T ss_dssp CSEEEECSCHHH-HHHHHHHHHHTTCEEEECCC--CCCHHHHHHHH
T ss_pred CCEEEEcCChHH-HHHHHHHHHhCCCCEEEECC--CCCHHHHHHHH
Confidence 999998875442 2334332 2557888766 35555444444
No 161
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.81 E-value=0.47 Score=45.01 Aligned_cols=112 Identities=20% Similarity=0.211 Sum_probs=65.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCC---EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGG---KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVH 280 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~Ga---kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~ 280 (410)
+.++|+|+|.|++|+.+++.|.+.|. +|+ +.|.+ .+.+.+..++. +.... ++.+.+ .
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~-v~dr~----------~~~~~~l~~~~-------gi~~~~~~~~~~-~ 62 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRIC-VTNRS----------LDKLDFFKEKC-------GVHTTQDNRQGA-L 62 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEE-EECSS----------SHHHHHHHHTT-------CCEEESCHHHHH-S
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEE-EEeCC----------HHHHHHHHHHc-------CCEEeCChHHHH-h
Confidence 34789999999999999999999997 665 77764 23444444331 12222 222333 3
Q ss_pred ccceEeecccCCccccccccc-----ccce-EEEecCCCCCCHHHHHHHHh--CCceEeccccc
Q 015287 281 ECDVLVPCALGGVLNKENAAD-----VKAK-FIIEAANHPTDPEADEILSK--KGVVILPDIYA 336 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~~-----i~ak-iIvEgAN~p~t~~A~~iL~~--rGI~v~PD~la 336 (410)
++|++|.|.-...+ .+.... ++.+ +|+--+++-......+.|.. +=|.+.|-.-+
T Consensus 63 ~aDvVilav~p~~~-~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~ 125 (280)
T 3tri_A 63 NADVVVLAVKPHQI-KMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPS 125 (280)
T ss_dssp SCSEEEECSCGGGH-HHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGG
T ss_pred cCCeEEEEeCHHHH-HHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChH
Confidence 79999998744333 222222 3444 77766665443444455542 22445565433
No 162
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=94.79 E-value=0.077 Score=52.56 Aligned_cols=115 Identities=15% Similarity=0.202 Sum_probs=70.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHH-HCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCC--eee-cCCcccc
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFH-EHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGG--NAM-DLNDLLV 279 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~-~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~--~~i-~~~~ll~ 279 (410)
...++++|.|.|..|+..++.|. ..+.+-|.|.|.+ .+...+..++-.. +++. ... +.++.+
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~----------~~~a~~la~~~~~---~~g~~~~~~~~~~eav- 192 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD----------PLATAKLIANLKE---YSGLTIRRASSVAEAV- 192 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS----------HHHHHHHHHHHTT---CTTCEEEECSSHHHHH-
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC----------HHHHHHHHHHHHh---ccCceEEEeCCHHHHH-
Confidence 46789999999999999988774 4566556687763 4444444433111 1121 111 123334
Q ss_pred cccceEeecccCC----cccccccccccceEEEecCCCCCCHHHHHHHHhCCceEeccc
Q 015287 280 HECDVLVPCALGG----VLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDI 334 (410)
Q Consensus 280 ~~~DvliPaA~~~----~I~~~na~~i~akiIvEgAN~p~t~~A~~iL~~rGI~v~PD~ 334 (410)
.++||++-|.-.. ++..+..+. .+.+++.|+..|-..|.+..+.+++..|+ |.
T Consensus 193 ~~aDiVi~aTps~~~~pvl~~~~l~~-G~~V~~vgs~~p~~~El~~~~~~~a~v~v-D~ 249 (350)
T 1x7d_A 193 KGVDIITTVTADKAYATIITPDMLEP-GMHLNAVGGDCPGKTELHADVLRNARVFV-EY 249 (350)
T ss_dssp TTCSEEEECCCCSSEEEEECGGGCCT-TCEEEECSCCBTTBEEECHHHHHTSEEEE-SS
T ss_pred hcCCEEEEeccCCCCCceecHHHcCC-CCEEEECCCCCCCceeeCHHHHhcCcEEE-CC
Confidence 3699999887643 333332222 66789999988876666666667776544 44
No 163
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=94.74 E-value=0.031 Score=55.14 Aligned_cols=109 Identities=10% Similarity=0.187 Sum_probs=68.4
Q ss_pred CCCeEEEEccChHHH-HHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc-cc
Q 015287 205 SNMKFAIQGFGNVGS-WAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH-EC 282 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~-~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~-~~ 282 (410)
+-.||+|+|+|.++. ..+..|...++++++|+|.+ .+...+..++.+...- .-+.+++++. ++
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~----------~~~a~~~a~~~~~~~~-----~~~~~~ll~~~~v 89 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKD----------DALAAEFSAVYADARR-----IATAEEILEDENI 89 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSC----------HHHHHHHHHHSSSCCE-----ESCHHHHHTCTTC
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCC----------HHHHHHHHHHcCCCcc-----cCCHHHHhcCCCC
Confidence 447999999999985 56677777899999999974 4555555554332111 1234567764 69
Q ss_pred ceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEec
Q 015287 283 DVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVILP 332 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~P 332 (410)
|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+..
T Consensus 90 D~V~I~t-p~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~l~v 144 (361)
T 3u3x_A 90 GLIVSAA-VSSERAELAIRAMQHGKDVLVDK---PGMTSFDQLAKLRRVQAETGRIFSI 144 (361)
T ss_dssp CEEEECC-CHHHHHHHHHHHHHTTCEEEEES---CSCSSHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEeC-ChHHHHHHHHHHHHCCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999664 44445444433 2 44688885 42 2 34544 35667776543
No 164
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=94.72 E-value=0.049 Score=51.82 Aligned_cols=72 Identities=18% Similarity=0.255 Sum_probs=50.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcccccccc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLVHECD 283 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~~~~D 283 (410)
.-+||++.|+|++|+.+++. . +..+++|.| +.-| .+ +... -+.++++. ++|
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~------~k~g--------------el----gv~a~~d~d~lla-~pD 62 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD------RISK--------------DI----PGVVRLDEFQVPS-DVS 62 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC------SSCC--------------CC----SSSEECSSCCCCT-TCC
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe------cccc--------------cc----CceeeCCHHHHhh-CCC
Confidence 45899999999999999998 3 899999988 1111 11 1222 24578886 999
Q ss_pred eEeecccCCcccccccccccc
Q 015287 284 VLVPCALGGVLNKENAADVKA 304 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~i~a 304 (410)
+++.||....+.+.-.+-+++
T Consensus 63 ~VVe~A~~~av~e~~~~iL~a 83 (253)
T 1j5p_A 63 TVVECASPEAVKEYSLQILKN 83 (253)
T ss_dssp EEEECSCHHHHHHHHHHHTTS
T ss_pred EEEECCCHHHHHHHHHHHHHC
Confidence 999999766665544444444
No 165
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.71 E-value=0.028 Score=57.52 Aligned_cols=117 Identities=14% Similarity=0.131 Sum_probs=66.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecC-C---ccccc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDL-N---DLLVH 280 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~-~---~ll~~ 280 (410)
++++|.|.|.|.+|+.+++.|.+.|++|+ ++|.+ .+.+.+..++.+.+.... . .+++ + +++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~-v~~R~----------~~~a~~la~~~~~~~~~~-~-Dv~d~~~l~~~l~- 67 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVT-VACRT----------LESAKKLSAGVQHSTPIS-L-DVNDDAALDAEVA- 67 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEE-EEESS----------HHHHHHTTTTCTTEEEEE-C-CTTCHHHHHHHHT-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEE-EEECC----------HHHHHHHHHhcCCceEEE-e-ecCCHHHHHHHHc-
Confidence 56899999999999999999999999965 77763 233333222211110000 0 0111 1 2233
Q ss_pred ccceEeecccCCcccccccc-cc--cceEEEecCCCCCCHHHHHHHHhCCceEeccccc
Q 015287 281 ECDVLVPCALGGVLNKENAA-DV--KAKFIIEAANHPTDPEADEILSKKGVVILPDIYA 336 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~-~i--~akiIvEgAN~p~t~~A~~iL~~rGI~v~PD~la 336 (410)
++|++|-|+-.. .+...+. .+ +..++.+....|.+.+..+..+++|+.+++.+-.
T Consensus 68 ~~DvVIn~a~~~-~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~ 125 (450)
T 1ff9_A 68 KHDLVISLIPYT-FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGL 125 (450)
T ss_dssp TSSEEEECCC---CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBB
T ss_pred CCcEEEECCccc-cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCC
Confidence 799999998432 2222111 12 3456666443343344456678899988766544
No 166
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=94.67 E-value=0.063 Score=51.84 Aligned_cols=102 Identities=17% Similarity=0.224 Sum_probs=60.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-ccc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HEC 282 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~ 282 (410)
+-.||+|+|+|++|+..++.|.+ .+.++++|+|.+. + .+.+ .+ +. + . +-+++++ .++
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~-----~-----~~~~----~g-~~-~---~--~~~~l~~~~~~ 66 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNP-----A-----EVPF----EL-QP-F---R--VVSDIEQLESV 66 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CC-TT-S---C--EESSGGGSSSC
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCH-----H-----HHHH----cC-CC-c---C--CHHHHHhCCCC
Confidence 34699999999999999999876 5789999999752 1 1111 11 11 1 1 1233333 489
Q ss_pred ceEeecccCCccccccccc---ccceEEEecCCCCC-C---HHH---HHHHHhCCceEe
Q 015287 283 DVLVPCALGGVLNKENAAD---VKAKFIIEAANHPT-D---PEA---DEILSKKGVVIL 331 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~---i~akiIvEgAN~p~-t---~~A---~~iL~~rGI~v~ 331 (410)
|+++-|. ++..+.+.+.. -+..+|+| -|+ . .++ .+..+++|+.++
T Consensus 67 DvViiat-p~~~h~~~~~~al~aG~~Vi~e---kP~~a~~~~~~~~l~~~a~~~g~~~~ 121 (304)
T 3bio_A 67 DVALVCS-PSREVERTALEILKKGICTADS---FDIHDGILALRRSLGDAAGKSGAAAV 121 (304)
T ss_dssp CEEEECS-CHHHHHHHHHHHHTTTCEEEEC---CCCGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEECC-CchhhHHHHHHHHHcCCeEEEC---CCCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 9999886 34444444433 25568887 242 2 223 345677786654
No 167
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.67 E-value=0.33 Score=47.83 Aligned_cols=32 Identities=34% Similarity=0.582 Sum_probs=28.9
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
.||+|.|||.+|+.+++.|.++ +.+||+|.|.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~ 36 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDP 36 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECC
Confidence 4899999999999999999875 6899999984
No 168
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.62 E-value=0.74 Score=46.96 Aligned_cols=32 Identities=34% Similarity=0.508 Sum_probs=28.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++|+|+|.|.||..+|..|.+.|.+|+ +.|.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~-~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVR-CIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEE-EEECC
Confidence 689999999999999999999999998 56764
No 169
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=94.60 E-value=0.042 Score=53.46 Aligned_cols=87 Identities=11% Similarity=0.122 Sum_probs=52.5
Q ss_pred CeEEEEccChHHH-HHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-cccc
Q 015287 207 MKFAIQGFGNVGS-WAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HECD 283 (410)
Q Consensus 207 ~~vaIqGfGnVG~-~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~D 283 (410)
.||+|+|+|.+|+ +.+..|.+ .+++|+||+|.+ .+...+..++.+--.-| -+.+++|. .++|
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~----------~~~a~~~a~~~g~~~~y-----~d~~ell~~~~iD 88 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRD----------LTRAREMADRFSVPHAF-----GSYEEMLASDVID 88 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSS----------HHHHHHHHHHHTCSEEE-----SSHHHHHHCSSCS
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCC----------HHHHHHHHHHcCCCeee-----CCHHHHhcCCCCC
Confidence 6999999999997 46777765 479999999984 45555555443211111 23355664 3577
Q ss_pred eEeecccCCccccccccc-c--cceEEEe
Q 015287 284 VLVPCALGGVLNKENAAD-V--KAKFIIE 309 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~-i--~akiIvE 309 (410)
+++=|. ++..+.+.+.. + +..++||
T Consensus 89 aV~I~t-P~~~H~~~~~~al~aGkhVl~E 116 (350)
T 4had_A 89 AVYIPL-PTSQHIEWSIKAADAGKHVVCE 116 (350)
T ss_dssp EEEECS-CGGGHHHHHHHHHHTTCEEEEC
T ss_pred EEEEeC-CCchhHHHHHHHHhcCCEEEEe
Confidence 777664 33444333322 1 3346666
No 170
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.58 E-value=0.33 Score=47.78 Aligned_cols=32 Identities=25% Similarity=0.499 Sum_probs=28.5
Q ss_pred CeEEEEccChHHHHHHHHHHH-CCCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~ 238 (410)
.||+|.|||.+|+.+++.|.+ .+.+||+|.|.
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~ 36 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDP 36 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECS
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCC
Confidence 589999999999999999875 46899999984
No 171
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.52 E-value=0.033 Score=50.62 Aligned_cols=105 Identities=22% Similarity=0.240 Sum_probs=60.5
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc----cccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL----VHEC 282 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll----~~~~ 282 (410)
++|+|.|+|.+|+.+++.|.+.|..|+ +.|. |.+.+.+..+..+.-. +.+ . .+..+.+ -.++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~-vid~----------~~~~~~~l~~~~~~~~-i~g-d-~~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVV-IINK----------DRELCEEFAKKLKATI-IHG-D-GSHKEILRDAEVSKN 66 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEE-EEES----------CHHHHHHHHHHSSSEE-EES-C-TTSHHHHHHHTCCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEEC----------CHHHHHHHHHHcCCeE-EEc-C-CCCHHHHHhcCcccC
Confidence 479999999999999999999999998 5555 3444444433322100 000 0 0111222 2378
Q ss_pred ceEeecccCCccc---cccccc-c-cceEEEecCCCCCCHHHHHHHHhCCce
Q 015287 283 DVLVPCALGGVLN---KENAAD-V-KAKFIIEAANHPTDPEADEILSKKGVV 329 (410)
Q Consensus 283 DvliPaA~~~~I~---~~na~~-i-~akiIvEgAN~p~t~~A~~iL~~rGI~ 329 (410)
|++|-|.-....| ...+.+ . ..++|+-. |. ++-.+.|++-|+-
T Consensus 67 d~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~-~~---~~~~~~l~~~G~d 114 (218)
T 3l4b_C 67 DVVVILTPRDEVNLFIAQLVMKDFGVKRVVSLV-ND---PGNMEIFKKMGIT 114 (218)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHTSCCCEEEECC-CS---GGGHHHHHHHTCE
T ss_pred CEEEEecCCcHHHHHHHHHHHHHcCCCeEEEEE-eC---cchHHHHHHCCCC
Confidence 9999776443333 223333 2 33566643 32 3455678888874
No 172
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.51 E-value=2 Score=43.69 Aligned_cols=35 Identities=29% Similarity=0.467 Sum_probs=29.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-.|.+..|.|.|.||..+|..|.++|.+|+ +.|.+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~-~~D~~ 43 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVL-GVDIN 43 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEE-EECSC
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEE-EEECC
Confidence 357789999999999999999999999998 45664
No 173
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=94.51 E-value=0.023 Score=55.81 Aligned_cols=33 Identities=15% Similarity=0.449 Sum_probs=29.3
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~ 239 (410)
.||+|.|||.+|+.+++.|.+. +.++++|+|.+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~ 36 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK 36 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC
Confidence 4899999999999999999865 68999999974
No 174
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=94.44 E-value=0.012 Score=56.72 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=63.9
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-cccce
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HECDV 284 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~Dv 284 (410)
.+|+|+|+|++|+..++.|.+. +.++++|+|.+ .+.+.+..++ +. ..-+.++++. .++|+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~----------~~~~~~~~~~---~~-----~~~~~~~~l~~~~~D~ 72 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSN----------PDNLALVPPG---CV-----IESDWRSVVSAPEVEA 72 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESC----------HHHHTTCCTT---CE-----EESSTHHHHTCTTCCE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCC----------HHHHHHHHhh---Cc-----ccCCHHHHhhCCCCCE
Confidence 6899999999999999999875 78999999974 2222211111 11 1124456774 58999
Q ss_pred EeecccCCccccccccc-c--cceEEEecCCCCC--CH-HHHH---HHHhCCceEe
Q 015287 285 LVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--DP-EADE---ILSKKGVVIL 331 (410)
Q Consensus 285 liPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t~-~A~~---iL~~rGI~v~ 331 (410)
++-|. ++..+.+.+.. + +..+++|- |+ +. ++++ ..+++|+.+.
T Consensus 73 V~i~t-p~~~h~~~~~~al~~Gk~v~~eK---P~~~~~~~~~~l~~~a~~~g~~~~ 124 (315)
T 3c1a_A 73 VIIAT-PPATHAEITLAAIASGKAVLVEK---PLTLDLAEAEAVAAAAKATGVMVW 124 (315)
T ss_dssp EEEES-CGGGHHHHHHHHHHTTCEEEEES---SSCSCHHHHHHHHHHHHHHCCCEE
T ss_pred EEEeC-ChHHHHHHHHHHHHCCCcEEEcC---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 99885 34444444433 2 33588883 42 33 3333 4566777654
No 175
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=94.44 E-value=0.025 Score=54.49 Aligned_cols=109 Identities=10% Similarity=0.180 Sum_probs=63.2
Q ss_pred CCCeEEEEccChHHHH-HHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccccc
Q 015287 205 SNMKFAIQGFGNVGSW-AAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHEC 282 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~-~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~ 282 (410)
+-.+|+|+|+|++|+. .++.|.+ .+.++++|+|.+. + ...+..++.+ +..| -+.+++ ..++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~-----~-----~~~~~~~~~g-~~~~-----~~~~~l-~~~~ 66 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTR-----A-----KALPICESWR-IPYA-----DSLSSL-AASC 66 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSC-----T-----THHHHHHHHT-CCBC-----SSHHHH-HTTC
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCH-----H-----HHHHHHHHcC-CCcc-----CcHHHh-hcCC
Confidence 3468999999999986 8887765 5789999999752 1 2222222212 1111 122344 6689
Q ss_pred ceEeecccCCccccccccc-c--cceEEEecCCCCCC-HHHHH---HHHhCCceEec
Q 015287 283 DVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPTD-PEADE---ILSKKGVVILP 332 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~t-~~A~~---iL~~rGI~v~P 332 (410)
|+++-|. ++..+.+.+.. + +..+++|-- ..+| .++++ ..+++|+.+..
T Consensus 67 D~V~i~t-p~~~h~~~~~~al~~G~~v~~eKP-~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 67 DAVFVHS-STASHFDVVSTLLNAGVHVCVDKP-LAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp SEEEECS-CTTHHHHHHHHHHHTTCEEEEESS-SCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEeC-CchhHHHHHHHHHHcCCeEEEeCC-CCCCHHHHHHHHHHHHHcCCeEEE
Confidence 9999775 44444444433 2 345888841 1123 34443 45678887654
No 176
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=94.42 E-value=0.17 Score=50.19 Aligned_cols=32 Identities=28% Similarity=0.480 Sum_probs=28.9
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
.||+|-|||.+|+.+++.|.++ ...||+|.|.
T Consensus 3 ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~ 35 (342)
T 2ep7_A 3 IKVGINGFGRIGRSFFRASWGREEIEIVAINDL 35 (342)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 5899999999999999999876 6899999985
No 177
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.40 E-value=0.045 Score=51.05 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=64.8
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
.+++|++|.|.|.|.||...++.|.+.|++|+ |.+.+ ++ +++.++.++ +.+.-... ...++++ ..
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~Vt-Vvap~--------~~-~~l~~l~~~-~~i~~i~~--~~~~~dL--~~ 91 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAIT-VVAPT--------VS-AEINEWEAK-GQLRVKRK--KVGEEDL--LN 91 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEE-EECSS--------CC-HHHHHHHHT-TSCEEECS--CCCGGGS--SS
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECCC--------CC-HHHHHHHHc-CCcEEEEC--CCCHhHh--CC
Confidence 47999999999999999999999999999998 44432 22 344444443 22211110 1122222 36
Q ss_pred cceEeecccCCcccccccccccceEEEecCCCCCCHHHHHHHHhCCceEeccccccccCcee
Q 015287 282 CDVLVPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTV 343 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~i~akiIvEgAN~p~t~~A~~iL~~rGI~v~PD~laNaGGVi~ 343 (410)
+|++|-|.-...+|..-+..-+.++.|--+..| +.+=.++|.+ .+.|++.+
T Consensus 92 adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~p----------~~~~f~~Pai-v~rg~l~i 142 (223)
T 3dfz_A 92 VFFIVVATNDQAVNKFVKQHIKNDQLVNMASSF----------SDGNIQIPAQ-FSRGRLSL 142 (223)
T ss_dssp CSEEEECCCCTHHHHHHHHHSCTTCEEEC---------------CCSEECCEE-EEETTEEE
T ss_pred CCEEEECCCCHHHHHHHHHHHhCCCEEEEeCCc----------ccCeEEEeeE-EEeCCEEE
Confidence 888887754445554443332333434333332 1233667764 34466654
No 178
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=94.37 E-value=0.069 Score=51.51 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=64.2
Q ss_pred CeEEEEccChHHH-HHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccce
Q 015287 207 MKFAIQGFGNVGS-WAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDV 284 (410)
Q Consensus 207 ~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dv 284 (410)
.||+|+|+|++|+ ..++.|.+. +.+++ |+|.+ .+.+.+..++.+ +.. ...+..+.+..++|+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~~----------~~~~~~~a~~~g-~~~----~~~~~~~~l~~~~D~ 66 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTRN----------PKVLGTLATRYR-VSA----TCTDYRDVLQYGVDA 66 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECSC----------HHHHHHHHHHTT-CCC----CCSSTTGGGGGCCSE
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeCC----------HHHHHHHHHHcC-CCc----cccCHHHHhhcCCCE
Confidence 5899999999998 488888664 78999 99974 445554444433 111 012334445668999
Q ss_pred EeecccCCccccccccc-cc--ceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 285 LVPCALGGVLNKENAAD-VK--AKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 285 liPaA~~~~I~~~na~~-i~--akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
++-|.- +..+.+.+.. ++ ..+++|- |+ | .++++ ..+++|+.+.
T Consensus 67 V~i~tp-~~~h~~~~~~al~~Gk~V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~ 118 (323)
T 1xea_A 67 VMIHAA-TDVHSTLAAFFLHLGIPTFVDK---PLAASAQECENLYELAEKHHQPLY 118 (323)
T ss_dssp EEECSC-GGGHHHHHHHHHHTTCCEEEES---CSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred EEEECC-chhHHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHhcCCeEE
Confidence 998863 4444444422 33 3588883 43 3 33433 4567787654
No 179
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=94.36 E-value=0.073 Score=52.03 Aligned_cols=103 Identities=16% Similarity=0.231 Sum_probs=65.0
Q ss_pred CCeEEEEccChHHHH-HHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccc-c
Q 015287 206 NMKFAIQGFGNVGSW-AAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVH-E 281 (410)
Q Consensus 206 g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~-~ 281 (410)
-.||+|+|+|.+|+. .+..|.+. +++|++|+|.+ .+.+. + .+++.... +.++++.. +
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~----------~~~~~---~------~~~~~~~~~~~~~ll~~~~ 67 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSD----------ASKVH---A------DWPAIPVVSDPQMLFNDPS 67 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSC----------HHHHH---T------TCSSCCEESCHHHHHHCSS
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCC----------HHHHH---h------hCCCCceECCHHHHhcCCC
Confidence 368999999999986 77777664 78999999984 23222 1 22232222 34567754 7
Q ss_pred cceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 282 CDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+|+++-|. ++..+.+-+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 68 vD~V~i~t-p~~~H~~~~~~al~aGkhV~~EK---Pla~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 68 IDLIVIPT-PNDTHFPLAQSALAAGKHVVVDK---PFTVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp CCEEEECS-CTTTHHHHHHHHHHTTCEEEECS---SCCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEeC-ChHHHHHHHHHHHHCCCcEEEEC---CCcCCHHHHHHHHHHHHHcCCeEE
Confidence 99999886 55555554433 2 44688873 42 3 34443 4567777654
No 180
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.35 E-value=0.095 Score=49.50 Aligned_cols=166 Identities=20% Similarity=0.249 Sum_probs=86.2
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|+|+|++|+.+++.|.+.|.+|+ +.|.+ .+.+.+..+. + .... +.++++ .++|++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~-~~~~~----------~~~~~~~~~~-g-------~~~~~~~~~~~-~~~Dvv 60 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLI-IYDVF----------PDACKEFQDA-G-------EQVVSSPADVA-EKADRI 60 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEE-EECSS----------THHHHHHHTT-T-------CEECSSHHHHH-HHCSEE
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEE-EEeCC----------HHHHHHHHHc-C-------CeecCCHHHHH-hcCCEE
Confidence 479999999999999999999999876 66653 2333333222 1 1111 223433 379999
Q ss_pred eecccCCccccccc-------ccc-cceEEEecCCCCCCH---HHHHHHHhCCceEeccccccccC----------ceeh
Q 015287 286 VPCALGGVLNKENA-------ADV-KAKFIIEAANHPTDP---EADEILSKKGVVILPDIYANSGG----------VTVS 344 (410)
Q Consensus 286 iPaA~~~~I~~~na-------~~i-~akiIvEgAN~p~t~---~A~~iL~~rGI~v~PD~laNaGG----------Vi~s 344 (410)
+-|.-.....++.. +.+ +-++|+. .++-... +..+.+.++|+.+ |+.-.. +| +..+
T Consensus 61 i~~vp~~~~~~~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~g~~~-~~~p~~-~g~~~a~~~~~~~~~~ 137 (296)
T 2gf2_A 61 ITMLPTSINAIEAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKMGAVF-MDAPVS-GGVGAARSGNLTFMVG 137 (296)
T ss_dssp EECCSSHHHHHHHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHTTCEE-EECCEE-SHHHHHHHTCEEEEEE
T ss_pred EEeCCCHHHHHHHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHcCCEE-EEcCCC-CChhHHhcCcEEEEeC
Confidence 98863322111111 122 2358888 4433222 2234567777654 443222 22 1111
Q ss_pred ----hHHHhhhcc---c-CCC-----CHHH----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 015287 345 ----YFEWVQNIQ---G-FMW-----EEEK----VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTL 395 (410)
Q Consensus 345 ----~~E~~qn~~---~-~~w-----~~~~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 395 (410)
.++.++.+- + ..| ..-. ++..+...+...+.+.+..+++.|+++.++..++
T Consensus 138 ~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~ 205 (296)
T 2gf2_A 138 GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKIL 205 (296)
T ss_dssp SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 233333211 0 011 1111 1222333334567888888899999876554443
No 181
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.31 E-value=0.052 Score=52.07 Aligned_cols=114 Identities=25% Similarity=0.290 Sum_probs=67.1
Q ss_pred CCCeEEEEc-cChHHHHHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee--cCCccccc
Q 015287 205 SNMKFAIQG-FGNVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM--DLNDLLVH 280 (410)
Q Consensus 205 ~g~~vaIqG-fGnVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i--~~~~ll~~ 280 (410)
+-.||+|.| +|.+|+.+++.+.+ .+.++|++.|.++.- ..|.|+.++. +......+ +.++++.
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~--~~G~d~gel~----------g~~~gv~v~~dl~~ll~- 72 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP--QLGQDAGAFL----------GKQTGVALTDDIERVCA- 72 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT--TTTSBTTTTT----------TCCCSCBCBCCHHHHHH-
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc--cccccHHHHh----------CCCCCceecCCHHHHhc-
Confidence 447999999 89999999998875 578999999986531 1355544332 11111111 1234454
Q ss_pred ccceEeecccCCccccccccc---ccceEEEecCCCCCCHHHHHHHH----hCCceEeccc
Q 015287 281 ECDVLVPCALGGVLNKENAAD---VKAKFIIEAANHPTDPEADEILS----KKGVVILPDI 334 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~~---i~akiIvEgAN~p~t~~A~~iL~----~rGI~v~PD~ 334 (410)
++||+|-++..... .+|+.. -+.++|++- -..+++..+.|+ +.++++.|.+
T Consensus 73 ~~DVVIDfT~p~a~-~~~~~~al~~G~~vVigT--TG~s~~~~~~L~~aa~~~~vv~a~N~ 130 (272)
T 4f3y_A 73 EADYLIDFTLPEGT-LVHLDAALRHDVKLVIGT--TGFSEPQKAQLRAAGEKIALVFSANM 130 (272)
T ss_dssp HCSEEEECSCHHHH-HHHHHHHHHHTCEEEECC--CCCCHHHHHHHHHHTTTSEEEECSCC
T ss_pred CCCEEEEcCCHHHH-HHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHhccCCEEEECCC
Confidence 79999999854432 334433 255677743 235665444343 3345554544
No 182
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=94.28 E-value=0.11 Score=48.09 Aligned_cols=110 Identities=17% Similarity=0.232 Sum_probs=63.1
Q ss_pred CeEEEEccChHHHHHHHHHHHCCC----EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGG----KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHE 281 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~Ga----kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~ 281 (410)
++|+|+|.|++|+.+++.|.+.|. +|+ +.|.+ .+.+.+..++.+ .... ++.+.+ .+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~-~~~r~----------~~~~~~~~~~~g-------~~~~~~~~e~~-~~ 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQII-CSDLN----------TANLKNASEKYG-------LTTTTDNNEVA-KN 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEE-EECSC----------HHHHHHHHHHHC-------CEECSCHHHHH-HH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEE-EEeCC----------HHHHHHHHHHhC-------CEEeCChHHHH-Hh
Confidence 589999999999999999999997 776 66763 344444433322 1111 222333 36
Q ss_pred cceEeecccCCccccccccc----cc-ceEEEecCCCCCCHHHHHHHHh--CCceEeccccc
Q 015287 282 CDVLVPCALGGVLNKENAAD----VK-AKFIIEAANHPTDPEADEILSK--KGVVILPDIYA 336 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~----i~-akiIvEgAN~p~t~~A~~iL~~--rGI~v~PD~la 336 (410)
||++|-|.-... ..+.++. ++ -++|+--+++-......+.+.. +-+...|+.-+
T Consensus 64 aDvVilav~~~~-~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~ 124 (247)
T 3gt0_A 64 ADILILSIKPDL-YASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPA 124 (247)
T ss_dssp CSEEEECSCTTT-HHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGG
T ss_pred CCEEEEEeCHHH-HHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHH
Confidence 999999974332 2222222 33 3477755554333344455532 23455676533
No 183
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=94.27 E-value=0.037 Score=53.70 Aligned_cols=108 Identities=14% Similarity=0.161 Sum_probs=64.2
Q ss_pred CCCeEEEEccChHHH-HHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-ccc
Q 015287 205 SNMKFAIQGFGNVGS-WAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HEC 282 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~-~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~ 282 (410)
+-.||+|+|+|++|. ..++.|...+++||+|+|.+. + .+.+..++.+...-| -+.+++++ .++
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~-----~-----~~~~~a~~~~~~~~~-----~~~~~ll~~~~~ 67 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDS-----D-----NRAKFTSLFPSVPFA-----ASAEQLITDASI 67 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCT-----T-----SCHHHHHHSTTCCBC-----SCHHHHHTCTTC
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCH-----H-----HHHHHHHhcCCCccc-----CCHHHHhhCCCC
Confidence 346999999999996 566777778999999999752 1 222222322212112 13356665 479
Q ss_pred ceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 283 DVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 68 D~V~i~t-p~~~h~~~~~~al~aGkhVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 68 DLIACAV-IPCDRAELALRTLDAGKDFFTAK---PPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp CEEEECS-CGGGHHHHHHHHHHTTCEEEECS---SCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeC-ChhhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9998875 44444444432 2 33588873 53 3 34444 3567787665
No 184
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=94.27 E-value=0.066 Score=54.25 Aligned_cols=112 Identities=11% Similarity=0.074 Sum_probs=67.5
Q ss_pred CCCCeEEEEccChHHH-HHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-eecCCcccc-
Q 015287 204 ISNMKFAIQGFGNVGS-WAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-AMDLNDLLV- 279 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-~i~~~~ll~- 279 (410)
.+-.+|+|+|+|++|+ ..++.|.+. +.++|+|+|.+ .+.+.+..++.+. .. .+.. .-+.++++.
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~----------~~~~~~~a~~~g~-~~-~~~~~~~~~~~ll~~ 148 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGN----------AEKAKIVAAEYGV-DP-RKIYDYSNFDKIAKD 148 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSC----------HHHHHHHHHHTTC-CG-GGEECSSSGGGGGGC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCC----------HHHHHHHHHHhCC-Cc-ccccccCCHHHHhcC
Confidence 3447899999999997 788888664 68999999974 3444444444321 10 0000 123456775
Q ss_pred cccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 280 HECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 280 ~~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
.++|+++-|. .+..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 149 ~~vD~V~iat-p~~~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~ 205 (433)
T 1h6d_A 149 PKIDAVYIIL-PNSLHAEFAIRAFKAGKHVMCEK---PMATSVADCQRMIDAAKAANKKLM 205 (433)
T ss_dssp TTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECS---SCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEcC-CchhHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHhCCeEE
Confidence 4799999885 44444444433 2 33588883 43 3 34443 3567787765
No 185
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.25 E-value=0.13 Score=51.77 Aligned_cols=116 Identities=18% Similarity=0.214 Sum_probs=64.0
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCccc---------CCCCeeecC--C
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLND---------FQGGNAMDL--N 275 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~---------~~~~~~i~~--~ 275 (410)
++|+|.|.|.||..+|..|.+ |.+|+ +.|.+ .+.+....+..-.+.+ .++.-..+. .
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~-~~d~~----------~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~ 68 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVT-IVDIL----------PSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSK 68 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEE-EECSC----------HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEE-EEECC----------HHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHH
Confidence 479999999999999999998 99988 45654 2222222221111100 000101111 1
Q ss_pred cccccccceEeecccCCc----------cccccccc---c--cceEEEecCCCCC-CHHHHHHHHhCCceEecccc
Q 015287 276 DLLVHECDVLVPCALGGV----------LNKENAAD---V--KAKFIIEAANHPT-DPEADEILSKKGVVILPDIY 335 (410)
Q Consensus 276 ~ll~~~~DvliPaA~~~~----------I~~~na~~---i--~akiIvEgAN~p~-t~~A~~iL~~rGI~v~PD~l 335 (410)
+.+ .+||++|-|.-... ...+-++. + .+-+|.+..|.|- +.+..+.+.++.+.+.|.++
T Consensus 69 ~~~-~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~~~Pe~~ 143 (402)
T 1dlj_A 69 AAY-KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTDRIIFSPEFL 143 (402)
T ss_dssp HHH-HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCSCEEECCCCC
T ss_pred HHh-cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCCeEEECCccc
Confidence 222 37899998854331 01111111 2 2334456899885 45555666666788888765
No 186
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=94.25 E-value=0.059 Score=53.06 Aligned_cols=106 Identities=16% Similarity=0.225 Sum_probs=66.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-ccc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HEC 282 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~ 282 (410)
+..+|+|+|+|++|...++.|.+. ++++++|+|.+ .+.+. ..++.+ +..| -+.++++. .++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~----------~~~~~-~a~~~g-~~~~-----~~~~~ll~~~~~ 66 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDIL----------AEKRE-AAAQKG-LKIY-----ESYEAVLADEKV 66 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSS----------HHHHH-HHHTTT-CCBC-----SCHHHHHHCTTC
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCC----------HHHHH-HHHhcC-Ccee-----CCHHHHhcCCCC
Confidence 457899999999999999988765 78999999974 33332 222211 2222 23356664 479
Q ss_pred ceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 283 DVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 67 D~V~i~t-p~~~h~~~~~~al~aGkhVl~EK---P~a~~~~ea~~l~~~a~~~g~~~~ 120 (359)
T 3e18_A 67 DAVLIAT-PNDSHKELAISALEAGKHVVCEK---PVTMTSEDLLAIMDVAKRVNKHFM 120 (359)
T ss_dssp CEEEECS-CGGGHHHHHHHHHHTTCEEEEES---SCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CEEEEcC-CcHHHHHHHHHHHHCCCCEEeeC---CCcCCHHHHHHHHHHHHHhCCeEE
Confidence 9999775 44444444433 2 44688884 42 2 34443 4566777654
No 187
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.24 E-value=0.058 Score=49.36 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=56.3
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceE
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVL 285 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvl 285 (410)
-++|+|.|.|++|+.+++.|.+.|.+|+.+.|.+. +.+.+..++.+. ....+..+. -.++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~----------~~~~~l~~~~g~------~~~~~~~~~-~~~aDvV 85 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP----------ASLSSVTDRFGA------SVKAVELKD-ALQADVV 85 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG----------GGGHHHHHHHTT------TEEECCHHH-HTTSSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH----------HHHHHHHHHhCC------CcccChHHH-HhcCCEE
Confidence 36899999999999999999999999986577642 222222222111 011122222 2478999
Q ss_pred eecccCCccccccccc---ccceEEEecCCCC
Q 015287 286 VPCALGGVLNKENAAD---VKAKFIIEAANHP 314 (410)
Q Consensus 286 iPaA~~~~I~~~na~~---i~akiIvEgAN~p 314 (410)
|-|.-... ..+.+.. ++-++|+..+|+-
T Consensus 86 ilavp~~~-~~~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 86 ILAVPYDS-IADIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp EEESCGGG-HHHHHTTCSCCTTCEEEECCCCB
T ss_pred EEeCChHH-HHHHHHHhhccCCCEEEEcCCCC
Confidence 98864322 2222222 3457999999875
No 188
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=94.22 E-value=0.045 Score=53.11 Aligned_cols=107 Identities=14% Similarity=0.178 Sum_probs=68.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCC---CEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-ccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHG---GKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV-HEC 282 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~G---akvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~-~~~ 282 (410)
.||+|+|+|++|+..++.|.+.. +++++|+|.+ .+...+..++.+.-.. .-+.++++. .++
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~----------~~~a~~~a~~~~~~~~-----~~~~~~ll~~~~v 67 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARD----------LSRAKEFAQKHDIPKA-----YGSYEELAKDPNV 67 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSS----------HHHHHHHHHHHTCSCE-----ESSHHHHHHCTTC
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCC----------HHHHHHHHHHcCCCcc-----cCCHHHHhcCCCC
Confidence 58999999999999999887643 5899999974 4555555444321111 123456775 479
Q ss_pred ceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEec
Q 015287 283 DVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVILP 332 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~P 332 (410)
|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.-
T Consensus 68 D~V~i~t-p~~~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 68 EVAYVGT-QHPQHKAAVMLCLAAGKAVLCEK---PMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp CEEEECC-CGGGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEECC-CcHHHHHHHHHHHhcCCEEEEEC---CCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 9999875 55555555443 2 45688984 53 3 34444 45677876653
No 189
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.17 E-value=0.44 Score=46.86 Aligned_cols=33 Identities=27% Similarity=0.546 Sum_probs=28.8
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~ 239 (410)
.||+|.|||.+|+.++++|.++ ...||+|.|..
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~ 35 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLL 35 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCC
Confidence 4899999999999999999865 47999999853
No 190
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.06 E-value=0.066 Score=53.30 Aligned_cols=119 Identities=22% Similarity=0.237 Sum_probs=67.3
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
+.-++++|.|.|.|.+|+.+++.|.+. .+|+ |+|.+ .+.+.+..++...+ ...-...-+.++++. +
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~-V~~R~----------~~~a~~la~~~~~~-~~d~~~~~~l~~ll~-~ 77 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-FDVY-IGDVN----------NENLEKVKEFATPL-KVDASNFDKLVEVMK-E 77 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-SEEE-EEESC----------HHHHHHHTTTSEEE-ECCTTCHHHHHHHHT-T
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEE-EEECC----------HHHHHHHHhhCCeE-EEecCCHHHHHHHHh-C
Confidence 334578999999999999999999887 6654 88874 45554443321101 000000000112332 7
Q ss_pred cceEeecccCCccccccccc-ccc-eEEEecCCCC-CCHHHHHHHHhCCceEecccc
Q 015287 282 CDVLVPCALGGVLNKENAAD-VKA-KFIIEAANHP-TDPEADEILSKKGVVILPDIY 335 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~-i~a-kiIvEgAN~p-~t~~A~~iL~~rGI~v~PD~l 335 (410)
+|++|-|. +...+..-+.. +++ +.+++-++.+ -+.+..+..+++|+.++|..=
T Consensus 78 ~DvVIn~~-P~~~~~~v~~a~l~~G~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~g~G 133 (365)
T 2z2v_A 78 FELVIGAL-PGFLGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAG 133 (365)
T ss_dssp CSCEEECC-CHHHHHHHHHHHHHTTCCEEECCCCSSCGGGGHHHHHHTTCEEECSCB
T ss_pred CCEEEECC-ChhhhHHHHHHHHHhCCeEEEccCCcHHHHHHHHHHHHcCCEEEECCC
Confidence 99999884 33333322221 222 3455666654 344567788999999987653
No 191
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=94.00 E-value=0.093 Score=51.05 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=64.6
Q ss_pred CeEEEEccChHHHHHHHHHH-H-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-eecCCcccc-ccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFH-E-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-AMDLNDLLV-HEC 282 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~-~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-~i~~~~ll~-~~~ 282 (410)
.||+|+|+|++|+..++.|. + .+.++++|+|.+ .+.+.+..++.+- ... .-+.++++. .++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~----------~~~~~~~~~~~g~-----~~~~~~~~~~ll~~~~~ 67 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVN----------QEAAQKVVEQYQL-----NATVYPNDDSLLADENV 67 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSS----------HHHHHHHHHHTTC-----CCEEESSHHHHHHCTTC
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCC----------HHHHHHHHHHhCC-----CCeeeCCHHHHhcCCCC
Confidence 58999999999999999887 4 588999999974 4555554444331 011 123456665 368
Q ss_pred ceEeecccCCccccccccc-c--cceEEEecCCCCCCHHHHH---HHHhCCceE
Q 015287 283 DVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPTDPEADE---ILSKKGVVI 330 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~t~~A~~---iL~~rGI~v 330 (410)
|+++-|. ++..+.+.+.. + +..++||=-=.....++++ ..+++|+.+
T Consensus 68 D~V~i~t-p~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 68 DAVLVTS-WGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp CEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred CEEEECC-CchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 9988875 44444444433 2 3457777411111234443 345566643
No 192
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.95 E-value=0.099 Score=48.45 Aligned_cols=105 Identities=18% Similarity=0.243 Sum_probs=61.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCC----CEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHG----GKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV 279 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~G----akvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~ 279 (410)
+.++|+|+|.|++|+.+++.|.+.| ..|+ +.|.+..- . +.... ++.+.+
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~-~~~~~~~~---~---------------------g~~~~~~~~~~~- 56 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANANIIKKENLF-YYGPSKKN---T---------------------TLNYMSSNEELA- 56 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEE-EECSSCCS---S---------------------SSEECSCHHHHH-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEE-EEeCCccc---C---------------------ceEEeCCHHHHH-
Confidence 3568999999999999999999888 5665 67764211 0 11111 122332
Q ss_pred cccceEeecccCCccccccc----ccccceEEEecCCCCCCHHHHHHHHh--CCceEeccccc
Q 015287 280 HECDVLVPCALGGVLNKENA----ADVKAKFIIEAANHPTDPEADEILSK--KGVVILPDIYA 336 (410)
Q Consensus 280 ~~~DvliPaA~~~~I~~~na----~~i~akiIvEgAN~p~t~~A~~iL~~--rGI~v~PD~la 336 (410)
.+||++|-|.-...+ .+.+ +.++-++|+--.|+-......+.+.+ +.+.++|....
T Consensus 57 ~~~D~vi~~v~~~~~-~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~ 118 (262)
T 2rcy_A 57 RHCDIIVCAVKPDIA-GSVLNNIKPYLSSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPC 118 (262)
T ss_dssp HHCSEEEECSCTTTH-HHHHHHSGGGCTTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGG
T ss_pred hcCCEEEEEeCHHHH-HHHHHHHHHhcCCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHH
Confidence 379999998764433 2222 22334566666665333334455543 23567777643
No 193
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.93 E-value=0.076 Score=52.58 Aligned_cols=32 Identities=25% Similarity=0.448 Sum_probs=29.2
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
.||+|.|||.+|+.+++.|.++ ...||+|+|.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~ 35 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT 35 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 4899999999999999999876 6899999996
No 194
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.93 E-value=0.1 Score=47.46 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=28.6
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
..+..++|+|.|.|++|+.+++.|.+.|.+|+ +.|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~-~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVT-YYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEE-EECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcCC
Confidence 45788999999999999999999999999987 55653
No 195
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.91 E-value=2 Score=44.29 Aligned_cols=34 Identities=29% Similarity=0.260 Sum_probs=29.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHC-CC-EEEEEECCCC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEH-GG-KVVAVSDITG 240 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~-Ga-kvVaVsD~~G 240 (410)
-++|+|+|.|.||..+|..|.+. |. +|+ +.|.+-
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~-~~D~~~ 53 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVL-GFQRNS 53 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEE-EECCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEE-EEECCh
Confidence 36899999999999999999999 99 998 567653
No 196
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.88 E-value=0.36 Score=46.68 Aligned_cols=94 Identities=21% Similarity=0.276 Sum_probs=58.5
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCC----Ceee-cCCccccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQG----GNAM-DLNDLLVH 280 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~----~~~i-~~~~ll~~ 280 (410)
..+|+|.|.|++|+.++..|.+.|..|+ +.|.+ .+.+....+++..+ ..|+ .... ++++ -.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~-~~~r~----------~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~--~~ 79 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVI-LWARR----------KEIVDLINVSHTSP-YVEESKITVRATNDLEE--IK 79 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS----------HHHHHHHHHHSCBT-TBTTCCCCSEEESCGGG--CC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEE-EEeCC----------HHHHHHHHHhCCcc-cCCCCeeeEEEeCCHHH--hc
Confidence 4689999999999999999999999886 66653 23344444332222 1121 1222 2233 34
Q ss_pred ccceEeecccCCcccccccccc--cceEEEecCCCC
Q 015287 281 ECDVLVPCALGGVLNKENAADV--KAKFIIEAANHP 314 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~~i--~akiIvEgAN~p 314 (410)
++|++|-|--. ...++.+..+ .-++|+.-+|+-
T Consensus 80 ~aDvVil~vk~-~~~~~v~~~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 80 KEDILVIAIPV-QYIREHLLRLPVKPSMVLNLSKGI 114 (335)
T ss_dssp TTEEEEECSCG-GGHHHHHTTCSSCCSEEEECCCCC
T ss_pred CCCEEEEECCH-HHHHHHHHHhCcCCCEEEEEeCCC
Confidence 79999988543 3333334334 346899999863
No 197
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.84 E-value=0.045 Score=45.27 Aligned_cols=34 Identities=38% Similarity=0.618 Sum_probs=28.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++|+|.|+|.+|+.+++.|.+.|.+|+ +.|.
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~-~~d~ 37 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVL-AVDI 37 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCE-EEES
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 466789999999999999999999999988 4454
No 198
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.82 E-value=0.2 Score=48.65 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=56.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCC--EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGG--KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
+.-++|+|+|+|++|+.+|+.|.+.|. +|+ +.|.+ .+.+.... +.|.+.. ..-+.+++.-.+
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~-~~dr~----------~~~~~~a~-~~G~~~~----~~~~~~~~~~~~ 94 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYDIN----------PESISKAV-DLGIIDE----GTTSIAKVEDFS 94 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEE-EECSC----------HHHHHHHH-HTTSCSE----EESCTTGGGGGC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEE-EEECC----------HHHHHHHH-HCCCcch----hcCCHHHHhhcc
Confidence 345799999999999999999999998 777 56663 33333332 2232211 112334423358
Q ss_pred cceEeecccCCccccccccc----cc-ceEEEecCCC
Q 015287 282 CDVLVPCALGGVLNKENAAD----VK-AKFIIEAANH 313 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~----i~-akiIvEgAN~ 313 (410)
||++|.|.-...+. +.+.+ ++ -.+|+.-+..
T Consensus 95 aDvVilavp~~~~~-~vl~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 95 PDFVMLSSPVRTFR-EIAKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp CSEEEECSCGGGHH-HHHHHHHHHSCTTCEEEECCSC
T ss_pred CCEEEEeCCHHHHH-HHHHHHhhccCCCcEEEECCCC
Confidence 99999997554432 22222 32 2477776544
No 199
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=93.81 E-value=1.3 Score=43.56 Aligned_cols=32 Identities=31% Similarity=0.551 Sum_probs=28.3
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
.||+|-|||.+|+.+.|.+.+. ...||||-|.
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~ 34 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDP 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECT
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCC
Confidence 4899999999999999988775 5899999885
No 200
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=93.79 E-value=0.089 Score=51.84 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=64.8
Q ss_pred CCeEEEEccChHHHH-HHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc-cc
Q 015287 206 NMKFAIQGFGNVGSW-AAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV-HE 281 (410)
Q Consensus 206 g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~-~~ 281 (410)
-.||+|+|+|.+|+. .+..|.+. +++|++|+|.+ .+.+. + .+++.... +.++++. .+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~~~---~------~~~~~~~~~~~~~ll~~~~ 67 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRD----------EEKVK---R------DLPDVTVIASPEAAVQHPD 67 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSC----------HHHHH---H------HCTTSEEESCHHHHHTCTT
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC----------HHHHH---h------hCCCCcEECCHHHHhcCCC
Confidence 368999999999986 67777654 79999999985 23322 1 12233322 3356665 57
Q ss_pred cceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 282 CDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 68 ~D~V~i~t-p~~~H~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~ 122 (364)
T 3e82_A 68 VDLVVIAS-PNATHAPLARLALNAGKHVVVDK---PFTLDMQEARELIALAEEKQRLLS 122 (364)
T ss_dssp CSEEEECS-CGGGHHHHHHHHHHTTCEEEECS---CSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEeC-ChHHHHHHHHHHHHCCCcEEEeC---CCcCCHHHHHHHHHHHHHhCCeEE
Confidence 99999884 55555554433 2 44688874 42 2 33433 4667787765
No 201
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=93.78 E-value=0.041 Score=51.99 Aligned_cols=105 Identities=17% Similarity=0.180 Sum_probs=63.6
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEe
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLV 286 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvli 286 (410)
++|+|.|+|++|+.+++.|.+.|.+|+ +.| +. +- .+.+. +. + +..+ -+.++++ .+||+++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-~~-----~~--~~~~~---~~-g-~~~~-----~~~~~~~-~~~D~vi 63 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLH-VTT-IG-----PV--ADELL---SL-G-AVNV-----ETARQVT-EFADIIF 63 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEE-ECC-SS-----CC--CHHHH---TT-T-CBCC-----SSHHHHH-HTCSEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEE-EEc-CH-----HH--HHHHH---Hc-C-Cccc-----CCHHHHH-hcCCEEE
Confidence 589999999999999999999999987 555 42 11 12222 11 1 1110 1223333 3799999
Q ss_pred ecccCCccccc-------ccccc-cceEEEecCCCCC--CHHHHHHHHhCCceEe
Q 015287 287 PCALGGVLNKE-------NAADV-KAKFIIEAANHPT--DPEADEILSKKGVVIL 331 (410)
Q Consensus 287 PaA~~~~I~~~-------na~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~ 331 (410)
-|.-.....++ -.+.+ .-++|+.-+|+.. +.+..+.+.++|+.++
T Consensus 64 ~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 64 IMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp ECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred EECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 88733321111 12223 2468888888752 2344567778888776
No 202
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=93.77 E-value=0.032 Score=55.00 Aligned_cols=107 Identities=16% Similarity=0.118 Sum_probs=66.0
Q ss_pred CCCeEEEEccChHHHH-HHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcccc-c
Q 015287 205 SNMKFAIQGFGNVGSW-AAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLV-H 280 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~-~ 280 (410)
+..||+|+|+|++|+. .++.|.+. ++++++|+|.+ .+.+.+..++ |++... -+.++++. .
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~a~~------~~~~~~~~~~~~ll~~~ 67 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSD----------LERARRVHRF------ISDIPVLDNVPAMLNQV 67 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSS----------HHHHGGGGGT------SCSCCEESSHHHHHHHS
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCC----------HHHHHHHHHh------cCCCcccCCHHHHhcCC
Confidence 4579999999999984 78888765 78999999974 3333333222 222222 23456775 4
Q ss_pred ccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 281 ECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
++|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 68 ~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EK---Pla~~~~e~~~l~~~a~~~g~~~~ 123 (359)
T 3m2t_A 68 PLDAVVMAG-PPQLHFEMGLLAMSKGVNVFVEK---PPCATLEELETLIDAARRSDVVSG 123 (359)
T ss_dssp CCSEEEECS-CHHHHHHHHHHHHHTTCEEEECS---CSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEcC-CcHHHHHHHHHHHHCCCeEEEEC---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 789999774 34444444332 2 44688884 53 2 34443 4566787654
No 203
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.75 E-value=0.14 Score=48.33 Aligned_cols=108 Identities=16% Similarity=0.181 Sum_probs=61.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCC-----CeeecCCcccc--
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQG-----GNAMDLNDLLV-- 279 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~-----~~~i~~~~ll~-- 279 (410)
++|+|.|.|++|+.+|..|.+.|..|+ +.|.+ .+.+.+..+.+-.+...++ ....+++++..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~r~----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVT-LIDQW----------PAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQN 72 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEE-EEECC----------HHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccC
Confidence 589999999999999999999999887 55653 2333333333211211110 01112334433
Q ss_pred cccceEeecccCCccccccc----cccc-ceEEEecCCCCCC-HHHHHHHHhC
Q 015287 280 HECDVLVPCALGGVLNKENA----ADVK-AKFIIEAANHPTD-PEADEILSKK 326 (410)
Q Consensus 280 ~~~DvliPaA~~~~I~~~na----~~i~-akiIvEgAN~p~t-~~A~~iL~~r 326 (410)
.+||++|-|.-...+ .+.+ +.++ -++|+.-.|+..+ ....+.|.+.
T Consensus 73 ~~~d~vi~~v~~~~~-~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 73 EQVDLIIALTKAQQL-DAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKE 124 (316)
T ss_dssp CCCSEEEECSCHHHH-HHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCGG
T ss_pred CCCCEEEEEeccccH-HHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCCc
Confidence 289999988754332 2222 2232 3578888887644 3344445444
No 204
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.74 E-value=0.11 Score=49.91 Aligned_cols=105 Identities=16% Similarity=0.253 Sum_probs=62.6
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|.|+|++|+.+++.|.+.|.+|+ +.|.+. + ..+.+ .+. + .... +.++.+ .+||++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~-~~~~~~-----~--~~~~~---~~~-g-------~~~~~~~~~~~-~~~DvV 90 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVT-VWNRTA-----E--KCDLF---IQE-G-------ARLGRTPAEVV-STCDIT 90 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEE-EECSSG-----G--GGHHH---HHT-T-------CEECSCHHHHH-HHCSEE
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEE-EEeCCH-----H--HHHHH---HHc-C-------CEEcCCHHHHH-hcCCEE
Confidence 689999999999999999999999876 666542 1 11222 221 1 1111 122333 379999
Q ss_pred eecccCCccccccc-------ccc-cceEEEecCCCCC--CHHHHHHHHhCCceEe
Q 015287 286 VPCALGGVLNKENA-------ADV-KAKFIIEAANHPT--DPEADEILSKKGVVIL 331 (410)
Q Consensus 286 iPaA~~~~I~~~na-------~~i-~akiIvEgAN~p~--t~~A~~iL~~rGI~v~ 331 (410)
|-|.-......+.+ +.+ .-++|+..+|... ..+..+.+.++|+.++
T Consensus 91 i~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v 146 (316)
T 2uyy_A 91 FACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFL 146 (316)
T ss_dssp EECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 98875322222211 222 3368888888542 2334456767888766
No 205
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=93.66 E-value=0.83 Score=43.44 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=76.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCc
Q 015287 184 ATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSL 263 (410)
Q Consensus 184 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v 263 (410)
--+.|...+++ ..+.+ .++++.|.|.|.+|+.++..|.+.|++-|.|.+.+ .+...++.++-+.
T Consensus 102 TD~~G~~~~l~----~~~~~-~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt----------~~ka~~la~~~~~- 165 (271)
T 1npy_A 102 TDYIAIVKLIE----KYHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN----------VKTGQYLAALYGY- 165 (271)
T ss_dssp HHHHHHHHHHH----HTTCC-TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC----------HHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHH----HhCCC-CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC----------HHHHHHHHHHcCC-
Confidence 45567766664 34554 67899999999999999999999998544487774 3344333332111
Q ss_pred ccCCCCeeecCCcccccccceEeecccCCccc---ccc--c--ccc-cceEEEecCCCCCCHHHHHHHHhCCceEec
Q 015287 264 NDFQGGNAMDLNDLLVHECDVLVPCALGGVLN---KEN--A--ADV-KAKFIIEAANHPTDPEADEILSKKGVVILP 332 (410)
Q Consensus 264 ~~~~~~~~i~~~~ll~~~~DvliPaA~~~~I~---~~n--a--~~i-~akiIvEgAN~p~t~~A~~iL~~rGI~v~P 332 (410)
. +.. ++-..++||+|-|.--+... .+. . ..+ ..++|++-.-+|....-.+.-+++|+.+++
T Consensus 166 ------~-~~~-~~~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G~~~i~ 234 (271)
T 1npy_A 166 ------A-YIN-SLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPFIRYAQARGKQTIS 234 (271)
T ss_dssp ------E-EES-CCTTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCHHHHHHHHTTCEEEC
T ss_pred ------c-cch-hhhcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCCCEEEC
Confidence 1 111 11124799999776433311 111 1 123 346899999888532455667788988654
No 206
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=93.59 E-value=0.73 Score=45.47 Aligned_cols=32 Identities=34% Similarity=0.589 Sum_probs=28.2
Q ss_pred CeEEEEccChHHHHHHHHHHHC---CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH---GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~ 238 (410)
.||+|-|||.+|+.+.|.+.+. ...||||-|.
T Consensus 3 ~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~ 37 (335)
T 3doc_A 3 VRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL 37 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS
T ss_pred EEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 4899999999999999998876 5789999885
No 207
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.56 E-value=0.15 Score=48.46 Aligned_cols=52 Identities=21% Similarity=0.230 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEc-cChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 184 ATGLGVFFATEALLAEHGKSISNMKFAIQG-FGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 184 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-++.|....++..+ +.+++|+++.|.| .|.+|+.+++.|.+.|++|+ +.|.+
T Consensus 100 Td~~g~~~~l~~~~---~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~-i~~R~ 152 (287)
T 1lu9_A 100 TTAAAGVALVVKAA---GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVV-LCGRK 152 (287)
T ss_dssp HHHHHHHHHHHHHT---TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEESS
T ss_pred chHHHHHHHHHHhh---ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEE-EEECC
Confidence 45677776665321 6678999999999 89999999999999999965 77764
No 208
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.49 E-value=0.14 Score=46.72 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=54.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccce
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDV 284 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dv 284 (410)
..++|+|.|.|++|+.+++.|.+.|.+|+ +.|.+ .+.+.+..+. +....+.++.+ .+||+
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~-~~~r~----------~~~~~~~~~~--------g~~~~~~~~~~-~~~Dv 86 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVV-VGSRN----------PKRTARLFPS--------AAQVTFQEEAV-SSPEV 86 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEE-EEESS----------HHHHHHHSBT--------TSEEEEHHHHT-TSCSE
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeCC----------HHHHHHHHHc--------CCceecHHHHH-hCCCE
Confidence 34789999999999999999999999887 55653 2333322221 11212233333 37999
Q ss_pred EeecccCCccccccc---ccccceEEEecCCCC
Q 015287 285 LVPCALGGVLNKENA---ADVKAKFIIEAANHP 314 (410)
Q Consensus 285 liPaA~~~~I~~~na---~~i~akiIvEgAN~p 314 (410)
+|-|.-...+ .+-. ..++-++|+.-+|+.
T Consensus 87 Vi~av~~~~~-~~v~~l~~~~~~~~vv~~s~g~ 118 (215)
T 2vns_A 87 IFVAVFREHY-SSLCSLSDQLAGKILVDVSNPT 118 (215)
T ss_dssp EEECSCGGGS-GGGGGGHHHHTTCEEEECCCCC
T ss_pred EEECCChHHH-HHHHHHHHhcCCCEEEEeCCCc
Confidence 9988754332 1111 112456889988875
No 209
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.48 E-value=2 Score=44.00 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=27.7
Q ss_pred CeEEEEccChHHHHHHHHHHHC--CCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH--GGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~ 239 (410)
++|+|+|.|.||..+|..|.+. |.+|+ +.|.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~-~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVT-VVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEECC
Confidence 5899999999999999999988 78888 45653
No 210
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=93.47 E-value=0.076 Score=52.17 Aligned_cols=104 Identities=16% Similarity=0.324 Sum_probs=65.6
Q ss_pred CCCeEEEEccChHHHH-HHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcccc-c
Q 015287 205 SNMKFAIQGFGNVGSW-AAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLV-H 280 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~-~ 280 (410)
+-.||+|+|+|++|+. .+..|.+. +++|++|+|.+ .+.+ .++ |++... -+.++++. .
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~~---~~~------~~~~~~~~~~~~ll~~~ 64 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSR----------TEEV---KRD------FPDAEVVHELEEITNDP 64 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSC----------HHHH---HHH------CTTSEEESSTHHHHTCT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCC----------HHHH---Hhh------CCCCceECCHHHHhcCC
Confidence 3468999999999986 67777654 79999999985 2332 121 222222 24466775 5
Q ss_pred ccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 281 ECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
++|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 65 ~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EK---Pla~~~~e~~~l~~~a~~~g~~~~ 120 (358)
T 3gdo_A 65 AIELVIVTT-PSGLHYEHTMACIQAGKHVVMEK---PMTATAEEGETLKRAADEKGVLLS 120 (358)
T ss_dssp TCCEEEECS-CTTTHHHHHHHHHHTTCEEEEES---SCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEcC-CcHHHHHHHHHHHHcCCeEEEec---CCcCCHHHHHHHHHHHHHcCCeEE
Confidence 799999886 45555554433 2 44688884 42 2 34443 4567777665
No 211
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=93.44 E-value=0.69 Score=45.81 Aligned_cols=35 Identities=29% Similarity=0.478 Sum_probs=29.1
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
+.-.||+|-|||.+|+.+++.+.++ ...||+|.|.
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~ 44 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDP 44 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCC
Confidence 5567999999999999999998765 4799999984
No 212
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.44 E-value=0.085 Score=45.04 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=28.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
...+|+|.|+|.+|+.+++.|.+.|.+|+.| |.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vi-d~ 34 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVI-SN 34 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEE-EC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEE-EC
Confidence 4568999999999999999999999999854 44
No 213
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.40 E-value=0.12 Score=51.54 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=32.5
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++.+++|.|.|+|.+|..+++.+...|++|+ +.|.+
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~-~~d~~ 204 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVM-ATDVR 204 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 5789999999999999999999999999965 77875
No 214
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.37 E-value=0.067 Score=55.08 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=64.0
Q ss_pred hCCCCCCCeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeec--C-C
Q 015287 200 HGKSISNMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMD--L-N 275 (410)
Q Consensus 200 ~g~~l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~--~-~ 275 (410)
.+.++++++|.|.|.|.+|+.+++.|.+. |.+|+ |+|.+ .+.+.+..+..+ +.. ..++ + +
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~-v~~R~----------~~ka~~la~~~~-~~~----~~~D~~d~~ 80 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVT-VACRT----------LANAQALAKPSG-SKA----ISLDVTDDS 80 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEE-EEESS----------HHHHHHHHGGGT-CEE----EECCTTCHH
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEE-EEECC----------HHHHHHHHHhcC-CcE----EEEecCCHH
Confidence 34568889999999999999999999988 67755 77764 344444433211 100 0111 1 1
Q ss_pred c---ccccccceEeecccCCcccccccc-cc--cceEEEecCCCCCCHHHHHHHHhCCceEecccccc
Q 015287 276 D---LLVHECDVLVPCALGGVLNKENAA-DV--KAKFIIEAANHPTDPEADEILSKKGVVILPDIYAN 337 (410)
Q Consensus 276 ~---ll~~~~DvliPaA~~~~I~~~na~-~i--~akiIvEgAN~p~t~~A~~iL~~rGI~v~PD~laN 337 (410)
+ ++ .++|++|-|+-.. .+..-+. .+ +..++......|.+.+..+..+++|+.+++..-.+
T Consensus 81 ~l~~~l-~~~DvVIn~tp~~-~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~ 146 (467)
T 2axq_A 81 ALDKVL-ADNDVVISLIPYT-FHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLD 146 (467)
T ss_dssp HHHHHH-HTSSEEEECSCGG-GHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBT
T ss_pred HHHHHH-cCCCEEEECCchh-hhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcC
Confidence 2 22 3799999997432 2221111 12 23344322212323334456778999888776443
No 215
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.37 E-value=0.31 Score=47.07 Aligned_cols=108 Identities=20% Similarity=0.271 Sum_probs=59.7
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCC-Cccc--CCCC----eee-cCCccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNK-SLND--FQGG----NAM-DLNDLL 278 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g-~v~~--~~~~----~~i-~~~~ll 278 (410)
++|+|.|.|++|+.+|..|.+.|.+|+ +.|.+ .+.+.+..+..+ .+.+ ++.. ... +.++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~-~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVL-AWDID----------AQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEE-EEeCC----------HHHHHHHHhcCCeEEeccccccccccceecCCHHHHH
Confidence 689999999999999999999999976 55653 233333333322 1111 0000 111 112222
Q ss_pred ccccceEeecccCCccccccccc----cc-ceEEEecCC-CCCCHHHHHHHHhCC
Q 015287 279 VHECDVLVPCALGGVLNKENAAD----VK-AKFIIEAAN-HPTDPEADEILSKKG 327 (410)
Q Consensus 279 ~~~~DvliPaA~~~~I~~~na~~----i~-akiIvEgAN-~p~t~~A~~iL~~rG 327 (410)
.++|++|-|.-.... .+.+.. ++ -.+|+.-.| .+-+.+..+.|.++|
T Consensus 74 -~~~D~vi~~v~~~~~-~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~~~~l~~~~ 126 (359)
T 1bg6_A 74 -KDADVILIVVPAIHH-ASIAANIASYISEGQLIILNPGATGGALEFRKILRENG 126 (359)
T ss_dssp -TTCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEESSCCSSHHHHHHHHHHHTT
T ss_pred -hcCCEEEEeCCchHH-HHHHHHHHHhCCCCCEEEEcCCCchHHHHHHHHHHhcC
Confidence 379999988754443 333332 22 233444444 333444456677765
No 216
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.30 E-value=0.26 Score=46.53 Aligned_cols=87 Identities=17% Similarity=0.271 Sum_probs=55.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceE
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvl 285 (410)
++|+|.|+ |++|+.+++.|.+.|.+|+ +.|.+ .+.+.+..+ .+ +. ..+..+.+ .+||++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~r~----------~~~~~~~~~-~g-~~------~~~~~~~~-~~aDvV 71 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIEIA----------PEGRDRLQG-MG-IP------LTDGDGWI-DEADVV 71 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EECCS----------HHHHHHHHH-TT-CC------CCCSSGGG-GTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEECC----------HHHHHHHHh-cC-CC------cCCHHHHh-cCCCEE
Confidence 58999999 9999999999999999887 66653 233333332 22 11 11334444 379999
Q ss_pred eecccCCccccccccc----cc-ceEEEecCCCC
Q 015287 286 VPCALGGVLNKENAAD----VK-AKFIIEAANHP 314 (410)
Q Consensus 286 iPaA~~~~I~~~na~~----i~-akiIvEgAN~p 314 (410)
|-|.-...+ .+.+.. ++ -++|+..+++.
T Consensus 72 i~av~~~~~-~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 72 VLALPDNII-EKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp EECSCHHHH-HHHHHHHGGGSCTTCEEEESCSHH
T ss_pred EEcCCchHH-HHHHHHHHHhCCCCCEEEECCCCc
Confidence 988754442 222222 22 35777777764
No 217
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=93.28 E-value=0.089 Score=51.17 Aligned_cols=83 Identities=20% Similarity=0.267 Sum_probs=53.6
Q ss_pred CCeEEEEccChHHHHHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcccccccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLVHECD 283 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~~~~D 283 (410)
-.||+|.|+|++|+..++.|.+. +.++|+++|.+..- .+. + +... -+.++++ .++|
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~------~~~--------------~-gv~~~~d~~~ll-~~~D 60 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL------DTK--------------T-PVFDVADVDKHA-DDVD 60 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC------SSS--------------S-CEEEGGGGGGTT-TTCS
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH------hhc--------------C-CCceeCCHHHHh-cCCC
Confidence 46899999999999999998765 68999999975311 100 1 1111 1335666 6899
Q ss_pred eEeecccCCccccccccc-c--cceEEEecC
Q 015287 284 VLVPCALGGVLNKENAAD-V--KAKFIIEAA 311 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~-i--~akiIvEgA 311 (410)
+++-|.-... +.+++.. + +..+|+|-.
T Consensus 61 vViiatp~~~-h~~~~~~al~aG~~Vv~ekp 90 (320)
T 1f06_A 61 VLFLCMGSAT-DIPEQAPKFAQFACTVDTYD 90 (320)
T ss_dssp EEEECSCTTT-HHHHHHHHHTTTSEEECCCC
T ss_pred EEEEcCCcHH-HHHHHHHHHHCCCEEEECCC
Confidence 9998874432 3344332 3 446777653
No 218
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=93.27 E-value=0.023 Score=55.05 Aligned_cols=114 Identities=13% Similarity=0.098 Sum_probs=67.9
Q ss_pred CCeEEEEc-cChHHHHHHHHHH-HCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee--cCCcccccc
Q 015287 206 NMKFAIQG-FGNVGSWAAKFFH-EHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM--DLNDLLVHE 281 (410)
Q Consensus 206 g~~vaIqG-fGnVG~~~a~~L~-~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i--~~~~ll~~~ 281 (410)
-.||+|.| +|++|+.+++.+. ..+.++||+.|.++. +..|.|+.++.. +. +...++ +.++++. +
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~--~~~G~d~gel~G-------~~--~~gv~v~~dl~~ll~-~ 88 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS--SFVDKDASILIG-------SD--FLGVRITDDPESAFS-N 88 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC--TTTTSBGGGGTT-------CS--CCSCBCBSCHHHHTT-S
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc--cccccchHHhhc-------cC--cCCceeeCCHHHHhc-C
Confidence 36999999 9999999999986 468999999998652 124556543321 00 001112 2235554 8
Q ss_pred cceEeecccCCccccccccc---ccceEEEecCCCCCCHHHHH----HHHhCCceEeccc
Q 015287 282 CDVLVPCALGGVLNKENAAD---VKAKFIIEAANHPTDPEADE----ILSKKGVVILPDI 334 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~---i~akiIvEgAN~p~t~~A~~----iL~~rGI~v~PD~ 334 (410)
+||+|.++..... .+|+.. -+..+|+.-. ..+++-.+ ..++.++++.|.+
T Consensus 89 aDVvIDFT~p~a~-~~~~~~~l~~Gv~vViGTT--G~~~e~~~~L~~aa~~~~~~~a~N~ 145 (288)
T 3ijp_A 89 TEGILDFSQPQAS-VLYANYAAQKSLIHIIGTT--GFSKTEEAQIADFAKYTTIVKSGNM 145 (288)
T ss_dssp CSEEEECSCHHHH-HHHHHHHHHHTCEEEECCC--CCCHHHHHHHHHHHTTSEEEECSCC
T ss_pred CCEEEEcCCHHHH-HHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHHhCcCCEEEECCC
Confidence 9999998754432 344433 2556776532 24554332 3334556666655
No 219
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=93.25 E-value=0.082 Score=52.17 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=29.0
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~ 239 (410)
.||+|.|||.+|+.+++.|.++ +.++++|+|.+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~ 35 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTS 35 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSS
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 4899999999999999999764 68999999964
No 220
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=93.21 E-value=0.12 Score=50.86 Aligned_cols=108 Identities=21% Similarity=0.249 Sum_probs=64.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHH-H-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-eecCCccccc
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFH-E-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-AMDLNDLLVH 280 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~-~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-~i~~~~ll~~ 280 (410)
++-.||+|+|+|++|+..++.|. + .++++++|+|.+ .+.+.+..++.+- ... .-+.++++..
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~----------~~~~~~~a~~~g~-----~~~~~~~~~~ll~~ 85 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIV----------AGRAQAALDKYAI-----EAKDYNDYHDLIND 85 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSS----------TTHHHHHHHHHTC-----CCEEESSHHHHHHC
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCC----------HHHHHHHHHHhCC-----CCeeeCCHHHHhcC
Confidence 45579999999999999998887 4 589999999974 2333333333221 011 1233566653
Q ss_pred -ccceEeecccCCcccccccccc---cceEEEecCCCCC--C-HHHHHH---HHhCCceE
Q 015287 281 -ECDVLVPCALGGVLNKENAADV---KAKFIIEAANHPT--D-PEADEI---LSKKGVVI 330 (410)
Q Consensus 281 -~~DvliPaA~~~~I~~~na~~i---~akiIvEgAN~p~--t-~~A~~i---L~~rGI~v 330 (410)
++|+++-|. ++..+.+.+... +..++||= |+ | .+++++ .+++|+.+
T Consensus 86 ~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 86 KDVEVVIITA-SNEAHADVAVAALNANKYVFCEK---PLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp TTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEES---SSCSSHHHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEcC-CcHHHHHHHHHHHHCCCCEEeec---CccCCHHHHHHHHHHHHHhCCeE
Confidence 689988775 444444443331 44677774 42 2 344433 45666643
No 221
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.20 E-value=0.05 Score=55.86 Aligned_cols=133 Identities=17% Similarity=0.220 Sum_probs=77.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhC-CC---cc------cC-----CC
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSN-KS---LN------DF-----QG 268 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~-g~---v~------~~-----~~ 268 (410)
+-.||+|+|+|.+|+..++.+.+ .+.+|++|+|.+ .+...+..++. +. +. .. .+
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~----------~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g 91 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARR----------LPNTFKAIRTAYGDEENAREATTESAMTRAIEAG 91 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSS----------THHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTT
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCC----------HHHHHHHHHHhcCCccccccccchhhhhhhhccC
Confidence 44799999999999999988764 578999999985 34444433321 20 00 00 01
Q ss_pred -Ceee-cCCccccc-ccceEeecccCCcccccccc-cc--cceEEEecCCCCCC----HHHHHHHHhCCceEeccccccc
Q 015287 269 -GNAM-DLNDLLVH-ECDVLVPCALGGVLNKENAA-DV--KAKFIIEAANHPTD----PEADEILSKKGVVILPDIYANS 338 (410)
Q Consensus 269 -~~~i-~~~~ll~~-~~DvliPaA~~~~I~~~na~-~i--~akiIvEgAN~p~t----~~A~~iL~~rGI~v~PD~laNa 338 (410)
.... +.++++.. ++|+++.|.-....+.+.+. .+ +-.++++ |-+++ ++..+.-+++|+.+.+-+-.+
T Consensus 92 ~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~--nk~l~~~eg~eL~~~A~e~Gvvl~~~~gdq- 168 (446)
T 3upl_A 92 KIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM--NVEADVTIGPYLKAQADKQGVIYSLGAGDE- 168 (446)
T ss_dssp CEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEEECTTSH-
T ss_pred CceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec--CcccCHHHHHHHHHHHHHhCCeeeecCCcc-
Confidence 1112 23567754 79999998643333333332 23 3356664 54443 223345678899887654332
Q ss_pred cCceehhHHHhh
Q 015287 339 GGVTVSYFEWVQ 350 (410)
Q Consensus 339 GGVi~s~~E~~q 350 (410)
-+.+.--++|.+
T Consensus 169 p~~~~eLv~~a~ 180 (446)
T 3upl_A 169 PSSCMELIEFVS 180 (446)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 244556667765
No 222
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.17 E-value=0.13 Score=52.70 Aligned_cols=159 Identities=16% Similarity=0.155 Sum_probs=87.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHH----------CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-ee
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHE----------HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-AM 272 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~----------~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-~i 272 (410)
++-.+|+|.|+|+||+.+++.|.+ .+.+|++|+|++. +...... ++.. .-
T Consensus 8 Mk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~----------~~~~~~~---------~~~~~~~ 68 (444)
T 3mtj_A 8 MKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNL----------DKAEALA---------GGLPLTT 68 (444)
T ss_dssp CSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCH----------HHHHHHH---------TTCCEES
T ss_pred hCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCH----------HHhhhhc---------ccCcccC
Confidence 355789999999999999988864 4679999999852 2222211 1111 22
Q ss_pred cCCcccc-cccceEeecccCCccccccccc-c--cceEEEecCCCCC-CHHH---HHHHHhCCceEeccccccccC-c--
Q 015287 273 DLNDLLV-HECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT-DPEA---DEILSKKGVVILPDIYANSGG-V-- 341 (410)
Q Consensus 273 ~~~~ll~-~~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~-t~~A---~~iL~~rGI~v~PD~laNaGG-V-- 341 (410)
+.++++. .++|+++.|.-+...+.+.+.. + +..+|+| |-.. ..++ .+..+++|+.+. +-++-|+ .
T Consensus 69 d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvte--nkal~a~~~~eL~~~A~~~gv~l~--~Ea~V~~giPi 144 (444)
T 3mtj_A 69 NPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTA--NKHLVAKYGNEIFAAAQAKGVMVT--FEAAVAGGIPI 144 (444)
T ss_dssp CTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEE--CGGGSSTTSCH
T ss_pred CHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEEC--CcccCHHHHHHHHHHHHHhCCeEE--EEEeeeCChHH
Confidence 3456665 5799999997544555444322 2 4467765 2222 2222 345678898774 2232222 2
Q ss_pred eehhHHHhhh-----cccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 015287 342 TVSYFEWVQN-----IQGF-MWEEEKVNHELKRYMMSAFKDIKTMCQTHNC 386 (410)
Q Consensus 342 i~s~~E~~qn-----~~~~-~w~~~~v~~~l~~~m~~~~~~v~~~a~~~~~ 386 (410)
+..--|++.. +.+. ..+-..+..++.+. ...|++++..|++.|.
T Consensus 145 i~~LrelL~~~~Ig~I~GIlnGT~nyilt~m~~~-g~~f~~~l~eAq~lGy 194 (444)
T 3mtj_A 145 IKALREGLTANRIEWLAGIINGTSNFILSEMRDK-GAAFDDVLKEAQRLGY 194 (444)
T ss_dssp HHHHHTTTTTSCEEEEEEECCHHHHHHHHHHHHH-CCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCCCCceEEEEEcCCcccccccCCCC-CCCHHHHHHHHHHcCC
Confidence 1222222211 0010 11223344433321 3479999999998874
No 223
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=93.16 E-value=1.2 Score=43.95 Aligned_cols=32 Identities=47% Similarity=0.720 Sum_probs=27.9
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
.||+|-|||.+|+.+.|.+.+. ...||||-|.
T Consensus 5 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~ 37 (338)
T 3lvf_P 5 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL 37 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCceEEEEecC
Confidence 5899999999999999988765 4789999883
No 224
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=93.16 E-value=0.098 Score=53.03 Aligned_cols=110 Identities=14% Similarity=0.153 Sum_probs=68.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHH---hCCCcccCCCCeee-----cC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKK---SNKSLNDFQGGNAM-----DL 274 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~---~~g~v~~~~~~~~i-----~~ 274 (410)
++-.||+|+|+|.+|...++.|.+ .+++|++|+|.+ .+.+.+..+ +.+ ++..... +.
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~----------~~~~~~~a~~~~~~g----~~~~~~~~~~~~~~ 83 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPD----------PYMVGRAQEILKKNG----KKPAKVFGNGNDDY 83 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSC----------HHHHHHHHHHHHHTT----CCCCEEECSSTTTH
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCC----------HHHHHHHHHHHHhcC----CCCCceeccCCCCH
Confidence 345799999999999988888876 478999999974 344443322 111 2222222 33
Q ss_pred Ccccc-cccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 275 NDLLV-HECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 275 ~~ll~-~~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+++++ .++|+++-|. .+..+.+.+.. + +..++|| -|+ | .++++ ..+++|+.+.
T Consensus 84 ~~ll~~~~vD~V~i~t-p~~~h~~~~~~al~aGkhV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 84 KNMLKDKNIDAVFVSS-PWEWHHEHGVAAMKAGKIVGME---VSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp HHHTTCTTCCEEEECC-CGGGHHHHHHHHHHTTCEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred HHHhcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 56775 4799999885 34445444433 2 4468998 353 3 34444 3467787654
No 225
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.10 E-value=0.28 Score=45.91 Aligned_cols=88 Identities=16% Similarity=0.230 Sum_probs=53.6
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccceE
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECDVL 285 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~Dvl 285 (410)
++|+|.|+|++|+.+++.|.+.|.+|+ +.|.+ .+.+.... +.+... ... +.+++ .+||++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~~~----------~~~~~~~~-~~g~~~-----~~~~~~~~~--~~~D~v 61 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLI-GVSRQ----------QSTCEKAV-ERQLVD-----EAGQDLSLL--QTAKII 61 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHHHHHH-HTTSCS-----EEESCGGGG--TTCSEE
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEE-EEECC----------HHHHHHHH-hCCCCc-----cccCCHHHh--CCCCEE
Confidence 479999999999999999999999887 55653 33333332 222110 111 23344 689999
Q ss_pred eecccCCccccccc----cccc-ceEEEecCCCC
Q 015287 286 VPCALGGVLNKENA----ADVK-AKFIIEAANHP 314 (410)
Q Consensus 286 iPaA~~~~I~~~na----~~i~-akiIvEgAN~p 314 (410)
|-|.-...+ .+.+ +.++ -++|+..+|..
T Consensus 62 i~av~~~~~-~~~~~~l~~~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 62 FLCTPIQLI-LPTLEKLIPHLSPTAIVTDVASVK 94 (279)
T ss_dssp EECSCHHHH-HHHHHHHGGGSCTTCEEEECCSCC
T ss_pred EEECCHHHH-HHHHHHHHhhCCCCCEEEECCCCc
Confidence 998754322 2222 2232 35777776643
No 226
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=93.05 E-value=1.1 Score=44.47 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=28.4
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
.||+|-|||.+|+.+.|.+.+. ...||||-|.
T Consensus 5 ~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~ 37 (345)
T 4dib_A 5 TRVAINGFGRIGRMVFRQAIKESAFEIVAINAS 37 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS
T ss_pred EEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC
Confidence 5899999999999999988765 5899999885
No 227
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=93.03 E-value=0.15 Score=47.15 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=31.1
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~-~~~r 38 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVI-VSDI 38 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 488999999996 8999999999999999998 5665
No 228
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.96 E-value=0.14 Score=48.42 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcc
Q 015287 186 GLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLN 264 (410)
Q Consensus 186 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~ 264 (410)
+.|...+++. . ++++ ++.|.|.|++|+.++..|.+.|+ +|+ |++.+ .+...+..+
T Consensus 95 ~~G~~~~l~~----~--~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~-v~nR~----------~~ka~~la~------ 150 (253)
T 3u62_A 95 WVGVVKSLEG----V--EVKE-PVVVVGAGGAARAVIYALLQMGVKDIW-VVNRT----------IERAKALDF------ 150 (253)
T ss_dssp HHHHHHHTTT----C--CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEE-EEESC----------HHHHHTCCS------
T ss_pred HHHHHHHHHh----c--CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEE-EEeCC----------HHHHHHHHH------
Confidence 4566665543 2 5688 99999999999999999999998 554 77764 233322211
Q ss_pred cCCCCeeecCCccc--ccccceEeeccc---CC---cccccccccc-cceEEEecCCCCCCHHHHHHHHhCCce-Eecc
Q 015287 265 DFQGGNAMDLNDLL--VHECDVLVPCAL---GG---VLNKENAADV-KAKFIIEAANHPTDPEADEILSKKGVV-ILPD 333 (410)
Q Consensus 265 ~~~~~~~i~~~~ll--~~~~DvliPaA~---~~---~I~~~na~~i-~akiIvEgAN~p~t~~A~~iL~~rGI~-v~PD 333 (410)
.+. . .+.+++- -.++||+|-|.- .. .|..+ .+ ...+|++-+-+ .|+-.++ .+++|+. ++|.
T Consensus 151 ~~~-~--~~~~~~~~~~~~aDiVInatp~gm~p~~~~i~~~---~l~~~~~V~Divy~-~T~ll~~-A~~~G~~~~~~G 221 (253)
T 3u62_A 151 PVK-I--FSLDQLDEVVKKAKSLFNTTSVGMKGEELPVSDD---SLKNLSLVYDVIYF-DTPLVVK-ARKLGVKHIIKG 221 (253)
T ss_dssp SCE-E--EEGGGHHHHHHTCSEEEECSSTTTTSCCCSCCHH---HHTTCSEEEECSSS-CCHHHHH-HHHHTCSEEECT
T ss_pred Hcc-c--CCHHHHHhhhcCCCEEEECCCCCCCCCCCCCCHH---HhCcCCEEEEeeCC-CcHHHHH-HHHCCCcEEECC
Confidence 111 0 1112222 237899996542 11 12111 12 34688888777 5655443 4567887 7664
No 229
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.96 E-value=0.27 Score=46.08 Aligned_cols=101 Identities=17% Similarity=0.156 Sum_probs=58.5
Q ss_pred CeEEEEccChHHHHHHHHHHHCCC--EEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccccccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGG--KVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVHECD 283 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~~~D 283 (410)
++|+|+|+|++|+.+++.|.+.|. +|+ +.|.+ .+.+.... +.+... ... +.++.+..+||
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d~~----------~~~~~~~~-~~g~~~-----~~~~~~~~~~~~~aD 64 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYDIN----------PESISKAV-DLGIID-----EGTTSIAKVEDFSPD 64 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEE-EECSC----------HHHHHHHH-HTTSCS-----EEESCGGGGGGTCCS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEE-EEeCC----------HHHHHHHH-HCCCcc-----cccCCHHHHhcCCCC
Confidence 489999999999999999999998 776 56653 23333322 222110 111 22343322799
Q ss_pred eEeecccCCccccccccc----c-cceEEEecCCCCCC--HHHHHHHHh
Q 015287 284 VLVPCALGGVLNKENAAD----V-KAKFIIEAANHPTD--PEADEILSK 325 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~----i-~akiIvEgAN~p~t--~~A~~iL~~ 325 (410)
+++-|.-... +.+.+.. + .-.+|+..+|.... ....+.+.+
T Consensus 65 vVilavp~~~-~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~ 112 (281)
T 2g5c_A 65 FVMLSSPVRT-FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK 112 (281)
T ss_dssp EEEECSCHHH-HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred EEEEcCCHHH-HHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc
Confidence 9999864432 2222222 2 23478888887642 223455554
No 230
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.94 E-value=0.16 Score=51.11 Aligned_cols=36 Identities=22% Similarity=0.158 Sum_probs=32.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITG 240 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G 240 (410)
+.+++|.|.|+|.+|..+++.+...|++|+ +.|.+.
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~-v~D~~~ 205 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVR-AFDTRP 205 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcCCH
Confidence 678999999999999999999999999876 778753
No 231
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.90 E-value=0.099 Score=50.24 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=31.8
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
.+++|++|.|.|.|.||...++.|.+.|++|+-|+
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtVia 43 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVS 43 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEc
Confidence 46899999999999999999999999999998454
No 232
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.81 E-value=0.16 Score=51.04 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=31.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+.+.+|+|.|+|.+|..+++.+...|++|+ +.|.+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~-v~D~~ 216 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTT-GYDVR 216 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEE-EECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 578999999999999999999999999977 77875
No 233
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=92.70 E-value=0.23 Score=42.80 Aligned_cols=109 Identities=16% Similarity=0.203 Sum_probs=62.8
Q ss_pred CCeEEEEcc----ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccc
Q 015287 206 NMKFAIQGF----GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVH 280 (410)
Q Consensus 206 g~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~ 280 (410)
-++|+|+|. |++|..+++.|.+.|++|..| |. +.. ...+. +.... +.+++- .
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~v-np-------~~~-----------g~~i~---G~~~~~sl~el~-~ 69 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPV-SP-------KVA-----------GKTLL---GQQGYATLADVP-E 69 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEE-CS-------SST-----------TSEET---TEECCSSTTTCS-S
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEe-CC-------ccc-----------ccccC---CeeccCCHHHcC-C
Confidence 468999999 899999999999999986533 32 210 00111 11111 223333 3
Q ss_pred ccceEeecccCCcccccccc---cccce-EEEecCCCCCCHHHHHHHHhCCceEe-ccccccccCceeh
Q 015287 281 ECDVLVPCALGGVLNKENAA---DVKAK-FIIEAANHPTDPEADEILSKKGVVIL-PDIYANSGGVTVS 344 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~---~i~ak-iIvEgAN~p~t~~A~~iL~~rGI~v~-PD~laNaGGVi~s 344 (410)
++|+.+-|.-. ....+.+. +.+.+ +++.. +-.+.+..+.++++|+.++ | |+=|++..
T Consensus 70 ~~Dlvii~vp~-~~v~~v~~~~~~~g~~~i~i~~--~~~~~~l~~~a~~~Gi~~igp----nc~g~~~~ 131 (145)
T 2duw_A 70 KVDMVDVFRNS-EAAWGVAQEAIAIGAKTLWLQL--GVINEQAAVLAREAGLSVVMD----RCPAIELP 131 (145)
T ss_dssp CCSEEECCSCS-THHHHHHHHHHHHTCCEEECCT--TCCCHHHHHHHHTTTCEEECS----CCHHHHST
T ss_pred CCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcC--ChHHHHHHHHHHHcCCEEEcC----CeeeEEcc
Confidence 67877766432 22222221 12333 55543 2347888899999999987 4 45555443
No 234
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=92.64 E-value=0.4 Score=47.72 Aligned_cols=33 Identities=42% Similarity=0.714 Sum_probs=30.2
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
..+|+|-|||.||+.+.+.|.++...||+|.|.
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~~~~ivaIndl 53 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFERGIDIVAINDL 53 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CeEEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 479999999999999999999889999999886
No 235
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=92.63 E-value=0.54 Score=40.27 Aligned_cols=100 Identities=20% Similarity=0.234 Sum_probs=57.8
Q ss_pred CCeEEEEcc----ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc
Q 015287 206 NMKFAIQGF----GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 206 g~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~ 281 (410)
-++|+|+|. |++|..+++.|.+.|++|..|. |++ + ++ ..+.-|+ +.+++- .+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vn--------p~~-~--~i-------~G~~~y~-----sl~~l~-~~ 77 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN--------PKY-E--EV-------LGRKCYP-----SVLDIP-DK 77 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC--------TTC-S--EE-------TTEECBS-----SGGGCS-SC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEEC--------CCC-C--eE-------CCeeccC-----CHHHcC-CC
Confidence 468999999 7999999999999999977552 221 0 00 0111121 122332 25
Q ss_pred cceEeecccCCcccccccc---cccceEEEecCCCCCCHHHHHHHHhCCceEe
Q 015287 282 CDVLVPCALGGVLNKENAA---DVKAKFIIEAANHPTDPEADEILSKKGVVIL 331 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~---~i~akiIvEgAN~p~t~~A~~iL~~rGI~v~ 331 (410)
+|+.+-|.-. ....+-++ +..++.|+--. +....+..+.++++|+.++
T Consensus 78 vDlvvi~vp~-~~~~~vv~~~~~~gi~~i~~~~-g~~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 78 IEVVDLFVKP-KLTMEYVEQAIKKGAKVVWFQY-NTYNREASKKADEAGLIIV 128 (144)
T ss_dssp CSEEEECSCH-HHHHHHHHHHHHHTCSEEEECT-TCCCHHHHHHHHHTTCEEE
T ss_pred CCEEEEEeCH-HHHHHHHHHHHHcCCCEEEECC-CchHHHHHHHHHHcCCEEE
Confidence 6766655321 11122121 22445454332 2347888899999999987
No 236
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=92.62 E-value=0.13 Score=49.76 Aligned_cols=107 Identities=18% Similarity=0.161 Sum_probs=63.8
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccc------
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLL------ 278 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll------ 278 (410)
+||+|+|+ |.+|...++.|.+.+.++|||+|.+-.. . . . ...|++.... +.++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~--------~---~-~-----~~~~~~~~~~~~~~~ll~~~~~l 66 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV--------G---L-V-----DSFFPEAEFFTEPEAFEAYLEDL 66 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC--------G---G-G-----GGTCTTCEEESCHHHHHHHHHHH
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH--------H---H-H-----HhhCCCCceeCCHHHHHHHhhhh
Confidence 68999999 7899999999988899999999975310 0 0 0 0123333322 234555
Q ss_pred ---ccccceEeecccCCccccccccc-c--cceEEEecCCCCCCHHHHH---HHHhCCceEe
Q 015287 279 ---VHECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPTDPEADE---ILSKKGVVIL 331 (410)
Q Consensus 279 ---~~~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~t~~A~~---iL~~rGI~v~ 331 (410)
..++|+++-|. ++..+.+-+.. + +..++||=-=.....++++ ..+++|+.+.
T Consensus 67 ~~~~~~vD~V~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 127 (312)
T 3o9z_A 67 RDRGEGVDYLSIAS-PNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVY 127 (312)
T ss_dssp HHTTCCCSEEEECS-CGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEE
T ss_pred cccCCCCcEEEECC-CchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 35788888664 44455544433 2 4568887411112245544 3456777553
No 237
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=92.59 E-value=0.46 Score=40.56 Aligned_cols=112 Identities=20% Similarity=0.151 Sum_probs=61.8
Q ss_pred CCCCeEEEEcc----ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc
Q 015287 204 ISNMKFAIQGF----GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV 279 (410)
Q Consensus 204 l~g~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~ 279 (410)
++-++|+|+|. |++|+.+++.|.+.|++|..+ |.++. ++ ..+.-|+ +.+++..
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~v-np~~~----------~i-------~G~~~~~-----s~~el~~ 68 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPV-NPNYD----------EI-------EGLKCYR-----SVRELPK 68 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE-CTTCS----------EE-------TTEECBS-----SGGGSCT
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEe-CCCCC----------eE-------CCeeecC-----CHHHhCC
Confidence 45689999999 999999999999999986643 32210 00 0111121 2233332
Q ss_pred cccceEeecccCCccccccc---ccccceEEEecCCCCCCHHHHHHHHhCCceEeccccccccCceeh
Q 015287 280 HECDVLVPCALGGVLNKENA---ADVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVS 344 (410)
Q Consensus 280 ~~~DvliPaA~~~~I~~~na---~~i~akiIvEgAN~p~t~~A~~iL~~rGI~v~PD~laNaGGVi~s 344 (410)
++|+.+-|.-. ....+.+ -+.+.+.|+.-. +-.+.+..+..+++|+.++= -|+=|++..
T Consensus 69 -~vDlvii~vp~-~~v~~v~~~~~~~g~~~i~~~~-~~~~~~l~~~a~~~Gi~~ig---pnc~g~~~~ 130 (138)
T 1y81_A 69 -DVDVIVFVVPP-KVGLQVAKEAVEAGFKKLWFQP-GAESEEIRRFLEKAGVEYSF---GRCIMVETS 130 (138)
T ss_dssp -TCCEEEECSCH-HHHHHHHHHHHHTTCCEEEECT-TSCCHHHHHHHHHHTCEEEC---SCCHHHHC-
T ss_pred -CCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcC-ccHHHHHHHHHHHCCCEEEc---CCcceEEcc
Confidence 57777765421 2111111 112334333322 12478888899999998761 255555443
No 238
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=92.58 E-value=0.22 Score=48.47 Aligned_cols=109 Identities=16% Similarity=0.120 Sum_probs=69.2
Q ss_pred CCCCeEEEEccC-hHHHHHHHHHHHC--CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-
Q 015287 204 ISNMKFAIQGFG-NVGSWAAKFFHEH--GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV- 279 (410)
Q Consensus 204 l~g~~vaIqGfG-nVG~~~a~~L~~~--GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~- 279 (410)
-+-.||+|+|+| .+|...+..|.+. ++++++|+|.+ .+.+.+..++.+...- .-+.++++.
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~----------~~~~~~~a~~~~~~~~-----~~~~~~ll~~ 80 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRT----------RSHAEEFAKMVGNPAV-----FDSYEELLES 80 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSS----------HHHHHHHHHHHSSCEE-----ESCHHHHHHS
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCC----------HHHHHHHHHHhCCCcc-----cCCHHHHhcC
Confidence 345799999999 8999888888765 68999999974 4555554444332111 123356775
Q ss_pred cccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHHH---HHhCCceEe
Q 015287 280 HECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADEI---LSKKGVVIL 331 (410)
Q Consensus 280 ~~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~i---L~~rGI~v~ 331 (410)
.++|+++-|. ++..+.+-+.. + +..++||= |+ | .+++++ .+++|+.+.
T Consensus 81 ~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 137 (340)
T 1zh8_A 81 GLVDAVDLTL-PVELNLPFIEKALRKGVHVICEK---PISTDVETGKKVVELSEKSEKTVY 137 (340)
T ss_dssp SCCSEEEECC-CGGGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCEEEEeC-CchHHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCeEE
Confidence 4799999885 44444444433 2 44688983 53 3 445443 467787665
No 239
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=92.57 E-value=0.13 Score=49.91 Aligned_cols=107 Identities=18% Similarity=0.224 Sum_probs=64.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccc------
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLL------ 278 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll------ 278 (410)
+||+|+|+ |.+|...++.|.+.+.++|+|+|.+-.. . .. ...|++.... +.++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~--------~---~~------~~~~~~~~~~~~~~~ll~~~~~l 66 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSV--------G---II------DSISPQSEFFTEFEFFLDHASNL 66 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCC--------G---GG------GGTCTTCEEESSHHHHHHHHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH--------H---HH------HhhCCCCcEECCHHHHHHhhhhh
Confidence 68999999 7899999999988899999999985310 0 00 1123333332 234555
Q ss_pred ----ccccceEeecccCCccccccccc---ccceEEEecCCCCCCHHHHH---HHHhCCceEe
Q 015287 279 ----VHECDVLVPCALGGVLNKENAAD---VKAKFIIEAANHPTDPEADE---ILSKKGVVIL 331 (410)
Q Consensus 279 ----~~~~DvliPaA~~~~I~~~na~~---i~akiIvEgAN~p~t~~A~~---iL~~rGI~v~ 331 (410)
..++|+++-|. ++..+.+.+.. -+..++||=-=.....++++ ..+++|+.+.
T Consensus 67 ~~~~~~~vD~V~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 128 (318)
T 3oa2_A 67 KRDSATALDYVSICS-PNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLY 128 (318)
T ss_dssp TTSTTTSCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred hhccCCCCcEEEECC-CcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEE
Confidence 46788888664 44555554433 24568888411111234444 3456676553
No 240
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.45 E-value=0.2 Score=49.64 Aligned_cols=35 Identities=31% Similarity=0.436 Sum_probs=31.6
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++|.|.|.|.+|+.+++.+...|++|+ +.|.+
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~-~~d~~ 198 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGAQVT-ILDVN 198 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEECC
Confidence 789999999999999999999999999987 56653
No 241
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=92.45 E-value=0.12 Score=50.00 Aligned_cols=107 Identities=18% Similarity=0.229 Sum_probs=61.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-eecCCcccc-cc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-AMDLNDLLV-HE 281 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-~i~~~~ll~-~~ 281 (410)
+-.||+|+|+|++|+..++.|.+ .+.++++|+|.+. +- +.+..+ .|.... .-+.++++. .+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~-----~~-----~~~~a~------~~~~~~~~~~~~~ll~~~~ 67 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTL-----ES-----AQAFAN------KYHLPKAYDKLEDMLADES 67 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCS-----ST-----TCC---------CCCCSCEESCHHHHHTCTT
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCH-----HH-----HHHHHH------HcCCCcccCCHHHHhcCCC
Confidence 34689999999999998888865 4689999999752 10 101111 111111 123356664 47
Q ss_pred cceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 282 CDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 68 ~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EK---P~a~~~~e~~~l~~~a~~~~~~~~ 122 (329)
T 3evn_A 68 IDVIYVAT-INQDHYKVAKAALLAGKHVLVEK---PFTLTYDQANELFALAESCNLFLM 122 (329)
T ss_dssp CCEEEECS-CGGGHHHHHHHHHHTTCEEEEES---SCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEECC-CcHHHHHHHHHHHHCCCeEEEcc---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 88888764 44444444433 2 34688874 42 2 34433 3566777654
No 242
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.30 E-value=0.14 Score=51.08 Aligned_cols=36 Identities=28% Similarity=0.399 Sum_probs=32.1
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++.|++|.|.|+|.+|+.+++.+...|++|+ +.|.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~-~~d~~ 200 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVT-VLDIN 200 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEeCC
Confidence 4789999999999999999999999999987 56653
No 243
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=92.28 E-value=0.13 Score=47.74 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r 40 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVA-IADI 40 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 578999999995 8999999999999999998 5554
No 244
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.25 E-value=3 Score=42.42 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=28.0
Q ss_pred CeEEEEccChHHHHHHHHHHHC--CCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH--GGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~ 239 (410)
++|+|+|.|.||..+|..|.+. |.+|+ +.|.+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~-~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVT-VVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEECC
Confidence 5899999999999999999998 78987 55764
No 245
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=92.24 E-value=0.26 Score=47.99 Aligned_cols=37 Identities=16% Similarity=0.336 Sum_probs=27.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHH--------CCCEEEEEECCC
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHE--------HGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~--------~GakvVaVsD~~ 239 (410)
+++-.||+|+|+|.+|+.-++.+.. .+++||||+|.+
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~ 66 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEAN 66 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC-
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCC
Confidence 3677899999999999876655532 368999999985
No 246
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.20 E-value=0.22 Score=46.17 Aligned_cols=101 Identities=18% Similarity=0.243 Sum_probs=57.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEe
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLV 286 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvli 286 (410)
++|.|+|+|++|+.+++.|.+.|.+|+. .|.. -+.+.+.+..+. + .. -++++++ .+||++|
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~-~~~~--------~~~~~~~~~~~~-g-------~~-~~~~~~~-~~aDvvi 61 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVT-SLEG--------RSPSTIERARTV-G-------VT-ETSEEDV-YSCPVVI 61 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEE-CCTT--------CCHHHHHHHHHH-T-------CE-ECCHHHH-HTSSEEE
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEE-eCCc--------cCHHHHHHHHHC-C-------Cc-CCHHHHH-hcCCEEE
Confidence 4799999999999999999999999874 4441 122233333222 1 11 2333433 3799999
Q ss_pred ecccCCccccc---ccccccceEEEecCCCCC--CHHHHHHHHhCC
Q 015287 287 PCALGGVLNKE---NAADVKAKFIIEAANHPT--DPEADEILSKKG 327 (410)
Q Consensus 287 PaA~~~~I~~~---na~~i~akiIvEgAN~p~--t~~A~~iL~~rG 327 (410)
-|.-.....+. -.+.++- +|+.-++... +.+..+.+.++|
T Consensus 62 ~~v~~~~~~~~~~~~~~~~~~-~vi~~s~~~~~~~~~l~~~~~~~g 106 (264)
T 1i36_A 62 SAVTPGVALGAARRAGRHVRG-IYVDINNISPETVRMASSLIEKGG 106 (264)
T ss_dssp ECSCGGGHHHHHHHHHTTCCS-EEEECSCCCHHHHHHHHHHCSSSE
T ss_pred EECCCHHHHHHHHHHHHhcCc-EEEEccCCCHHHHHHHHHHHhhCC
Confidence 88654432221 1222344 8888754432 123344555555
No 247
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=92.19 E-value=0.26 Score=46.57 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+|+||++.|.|. +.+|+.+|+.|.+.|++|+ ++|.+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vv-i~~r~ 42 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVV-CAARR 42 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEESS
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEE-EEeCC
Confidence 689999999985 7899999999999999998 77764
No 248
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=92.19 E-value=0.067 Score=52.15 Aligned_cols=104 Identities=17% Similarity=0.277 Sum_probs=64.2
Q ss_pred CeEEEEccChHHHH-HHH-HHH-HCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCccccc-c
Q 015287 207 MKFAIQGFGNVGSW-AAK-FFH-EHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLVH-E 281 (410)
Q Consensus 207 ~~vaIqGfGnVG~~-~a~-~L~-~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~~-~ 281 (410)
.||+|+|+|++|+. .+. .|. ..++++++|+|.+- + .. + ....+++... -+.++++.. +
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~-----~-----~~-~------~~~~~~~~~~~~~~~~ll~~~~ 65 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHA-----K-----PE-E------QAPIYSHIHFTSDLDEVLNDPD 65 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSC-----C-----GG-G------GSGGGTTCEEESCTHHHHTCTT
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCH-----h-----HH-H------HHHhcCCCceECCHHHHhcCCC
Confidence 58999999999985 566 433 35899999999852 1 00 1 1122333332 244677764 7
Q ss_pred cceEeecccCCcccccccccc---cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 282 CDVLVPCALGGVLNKENAADV---KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~i---~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+|+++-|. ++..+.+.+... +..++|| -|+ | .++++ ..+++|+.+.
T Consensus 66 ~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~ 120 (345)
T 3f4l_A 66 VKLVVVCT-HADSHFEYAKRALEAGKNVLVE---KPFTPTLAQAKELFALAKSKGLTVT 120 (345)
T ss_dssp EEEEEECS-CGGGHHHHHHHHHHTTCEEEEC---SSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCEEEEcC-ChHHHHHHHHHHHHcCCcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 99999886 555555544432 5579999 353 3 34443 4567787654
No 249
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=92.17 E-value=0.29 Score=48.14 Aligned_cols=112 Identities=23% Similarity=0.283 Sum_probs=63.9
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc--cccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV--HECD 283 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~--~~~D 283 (410)
.+||+|.|.|.||+.+++.|.+ ...|. ++|.+ .+.+.+.++....+ ..+ ..+.+++.+ .++|
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~-~~~~~----------~~~~~~~~~~~~~~-~~d---~~d~~~l~~~~~~~D 79 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVY-IGDVN----------NENLEKVKEFATPL-KVD---ASNFDKLVEVMKEFE 79 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEE-EEESC----------HHHHHHHTTTSEEE-ECC---TTCHHHHHHHHTTCS
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeE-EEEcC----------HHHHHHHhccCCcE-EEe---cCCHHHHHHHHhCCC
Confidence 4589999999999999999975 46665 66653 34443332211001 000 001122222 3789
Q ss_pred eEeecccCCccccccccc---ccceEEEecCCCC-CCHHHHHHHHhCCceEecccc
Q 015287 284 VLVPCALGGVLNKENAAD---VKAKFIIEAANHP-TDPEADEILSKKGVVILPDIY 335 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~---i~akiIvEgAN~p-~t~~A~~iL~~rGI~v~PD~l 335 (410)
++|=|+- ...+..-++. -++.+ +.-+--+ ...+.++..+++|+.++|+.=
T Consensus 80 vVi~~~p-~~~~~~v~~~~~~~g~~y-vD~s~~~~~~~~l~~~a~~~g~~~i~~~G 133 (365)
T 3abi_A 80 LVIGALP-GFLGFKSIKAAIKSKVDM-VDVSFMPENPLELRDEAEKAQVTIVFDAG 133 (365)
T ss_dssp EEEECCC-GGGHHHHHHHHHHHTCEE-EECCCCSSCGGGGHHHHHHTTCEEECCCB
T ss_pred EEEEecC-CcccchHHHHHHhcCcce-EeeeccchhhhhhhhhhccCCceeeecCC
Confidence 9998763 3344443332 24444 3444333 344567788899999998753
No 250
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=92.06 E-value=0.19 Score=48.85 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=53.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHC--------CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEH--------GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLN 275 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~--------GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~ 275 (410)
++..||+|+|+|.+|+.-++.+.+. +++|+||+|.+ .+.+.+..++.+--.-| -+-+
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~----------~~~a~~~a~~~g~~~~~-----~d~~ 68 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRD----------AEAVRAAAGKLGWSTTE-----TDWR 68 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSS----------HHHHHHHHHHHTCSEEE-----SCHH
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCC----------HHHHHHHHHHcCCCccc-----CCHH
Confidence 4557999999999998877666542 35899999974 45555555443211111 1234
Q ss_pred cccc-cccceEeecccCCccccccccc-c--cceEEEec
Q 015287 276 DLLV-HECDVLVPCALGGVLNKENAAD-V--KAKFIIEA 310 (410)
Q Consensus 276 ~ll~-~~~DvliPaA~~~~I~~~na~~-i--~akiIvEg 310 (410)
++|. .++|+++=|. ++..+.+-+.. + +..++||=
T Consensus 69 ~ll~~~~iDaV~I~t-P~~~H~~~~~~al~aGkhVl~EK 106 (390)
T 4h3v_A 69 TLLERDDVQLVDVCT-PGDSHAEIAIAALEAGKHVLCEK 106 (390)
T ss_dssp HHTTCTTCSEEEECS-CGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHhcCCCCCEEEEeC-ChHHHHHHHHHHHHcCCCceeec
Confidence 5554 3677776663 34444333322 1 33566663
No 251
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.98 E-value=2.9 Score=42.89 Aligned_cols=33 Identities=27% Similarity=0.449 Sum_probs=29.0
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.++|+|.|.|.||..+|..|.+.|.+|++ .|.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~-~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFC-LDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEE-EECC
Confidence 37999999999999999999999999984 4653
No 252
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=91.94 E-value=0.37 Score=46.24 Aligned_cols=108 Identities=19% Similarity=0.249 Sum_probs=63.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCcccc-cc
Q 015287 205 SNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLV-HE 281 (410)
Q Consensus 205 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~-~~ 281 (410)
+..||+|+|+ |+.|+..++.|.+.|.++|+..|.... | ..+.+. ... +-+++.. .+
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~-----g-------------~~~~G~---~vy~sl~el~~~~~ 64 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG-----G-------------TTHLGL---PVFNTVREAVAATG 64 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----T-------------CEETTE---EEESSHHHHHHHHC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc-----c-------------ceeCCe---eccCCHHHHhhcCC
Confidence 3578999999 999999999998889998877665310 0 001111 111 1234443 36
Q ss_pred cceEeecccCCccccccccc---ccceEEEecCCCCCCH---HHHHHHHhCCceEe-ccc
Q 015287 282 CDVLVPCALGGVLNKENAAD---VKAKFIIEAANHPTDP---EADEILSKKGVVIL-PDI 334 (410)
Q Consensus 282 ~DvliPaA~~~~I~~~na~~---i~akiIvEgAN~p~t~---~A~~iL~~rGI~v~-PD~ 334 (410)
+|+.+-|.- ...+.+.+.. -+.+++++.+-+.... +..+..+++|+.++ |..
T Consensus 65 ~D~viI~tP-~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc 123 (288)
T 2nu8_A 65 ATASVIYVP-APFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNT 123 (288)
T ss_dssp CCEEEECCC-GGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSC
T ss_pred CCEEEEecC-HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 788776642 2233333332 3667766655443222 44567788999665 554
No 253
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=91.86 E-value=0.14 Score=50.78 Aligned_cols=105 Identities=20% Similarity=0.323 Sum_probs=65.3
Q ss_pred CeEEEEccC-hHHHHHHHHHHH-CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccccc-ccc
Q 015287 207 MKFAIQGFG-NVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVH-ECD 283 (410)
Q Consensus 207 ~~vaIqGfG-nVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~-~~D 283 (410)
.||+|+|+| .+|...+..|.+ .++++++|+|.+ .+...+..++.+ +.. .-+.++++.. ++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~a~~~g-~~~-----~~~~~ell~~~~vD 66 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPN----------EDVRERFGKEYG-IPV-----FATLAEMMQHVQMD 66 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSC----------HHHHHHHHHHHT-CCE-----ESSHHHHHHHSCCS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCC----------HHHHHHHHHHcC-CCe-----ECCHHHHHcCCCCC
Confidence 689999999 999888888876 478999999974 444444443322 211 2234677754 799
Q ss_pred eEeecccCCcccccccccc---cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 284 VLVPCALGGVLNKENAADV---KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 284 vliPaA~~~~I~~~na~~i---~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+++-|. .+..+.+.+... ...++||= |+ | .++++ ..+++|+.+.
T Consensus 67 ~V~i~t-p~~~H~~~~~~al~aGk~Vl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 119 (387)
T 3moi_A 67 AVYIAS-PHQFHCEHVVQASEQGLHIIVEK---PLTLSRDEADRMIEAVERAGVHLV 119 (387)
T ss_dssp EEEECS-CGGGHHHHHHHHHHTTCEEEECS---CCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred EEEEcC-CcHHHHHHHHHHHHCCCceeeeC---CccCCHHHHHHHHHHHHHhCCeEE
Confidence 999875 344444444332 44688873 42 3 33433 4567777654
No 254
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.66 E-value=0.21 Score=46.65 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=32.1
Q ss_pred CCCCCCeEEEEccC---hHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGFG---NVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGfG---nVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+|+||++.|.|.+ .+|..+|+.|.++|++|+ ++|.+
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vv-i~~r~ 41 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLV-FTYRK 41 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEE-EEESS
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEE-EEECC
Confidence 36899999999963 599999999999999998 67764
No 255
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=91.65 E-value=0.071 Score=54.08 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=68.3
Q ss_pred CCCeEEEEcc----ChHHHHHHHHHHHC--CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcc
Q 015287 205 SNMKFAIQGF----GNVGSWAAKFFHEH--GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDL 277 (410)
Q Consensus 205 ~g~~vaIqGf----GnVG~~~a~~L~~~--GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~l 277 (410)
+-.||+|+|+ |.+|...++.|.+. +++||+|+|.+ .+.+.+..++.+. +.... -+.+++
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~----------~~~~~~~a~~~g~----~~~~~~~~~~~l 84 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPK----------IETSIATIQRLKL----SNATAFPTLESF 84 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSS----------HHHHHHHHHHTTC----TTCEEESSHHHH
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCC----------HHHHHHHHHHcCC----CcceeeCCHHHH
Confidence 3479999999 99999888888876 78999999974 4455444444321 11111 234567
Q ss_pred cc-cccceEeecccCCccccccccc-c--c------ceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 278 LV-HECDVLVPCALGGVLNKENAAD-V--K------AKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 278 l~-~~~DvliPaA~~~~I~~~na~~-i--~------akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
+. .++|+++-|. .+..+.+.+.. + + ..++||= |+ | .++++ ..+++|+.+.
T Consensus 85 l~~~~vD~V~i~t-p~~~H~~~~~~al~aG~~~~~~khVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 150 (438)
T 3btv_A 85 ASSSTIDMIVIAI-QVASHYEVVMPLLEFSKNNPNLKYLFVEW---ALACSLDQAESIYKAAAERGVQTI 150 (438)
T ss_dssp HHCSSCSEEEECS-CHHHHHHHHHHHHHHGGGCTTCCEEEEES---SCCSSHHHHHHHHHHHHTTTCEEE
T ss_pred hcCCCCCEEEEeC-CcHHHHHHHHHHHHCCCCcccceeEEecC---cccCCHHHHHHHHHHHHHcCCeEE
Confidence 75 4799999885 33344433332 2 3 4588983 43 3 34443 4567787655
No 256
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.64 E-value=0.21 Score=45.25 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=28.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
++++++|.|.|. |.+|+++++.|.++|++|++++
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~ 52 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMV 52 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEE
Confidence 488999999997 9999999999999999999654
No 257
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.60 E-value=0.55 Score=45.33 Aligned_cols=104 Identities=19% Similarity=0.219 Sum_probs=60.1
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCC----CEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccc
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHG----GKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLL 278 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~G----akvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll 278 (410)
++.++|+|+|.|++|+.++..|.+.| ..|+ +.|.+. + .+.+.+..+. | .... ++.+..
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~-v~~r~~-----~---~~~~~~l~~~-G-------~~~~~~~~e~~ 82 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIM-ASSPDM-----D---LATVSALRKM-G-------VKLTPHNKETV 82 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEE-EECSCT-----T---SHHHHHHHHH-T-------CEEESCHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEE-EECCCc-----c---HHHHHHHHHc-C-------CEEeCChHHHh
Confidence 34468999999999999999999999 5665 666542 1 0122222221 1 1111 122322
Q ss_pred ccccceEeecccCCcccc---ccccccc-ceEEEecCCCCCCHHHHHHHHh
Q 015287 279 VHECDVLVPCALGGVLNK---ENAADVK-AKFIIEAANHPTDPEADEILSK 325 (410)
Q Consensus 279 ~~~~DvliPaA~~~~I~~---~na~~i~-akiIvEgAN~p~t~~A~~iL~~ 325 (410)
.+||++|-|.-...+.+ +-.+.++ -++|+.-+|+-...+..+.|.+
T Consensus 83 -~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~ 132 (322)
T 2izz_A 83 -QHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSA 132 (322)
T ss_dssp -HHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHT
T ss_pred -ccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhh
Confidence 37999999875433221 1122232 3689998886544455566765
No 258
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=91.52 E-value=0.14 Score=48.04 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=31.7
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+++|+++.|.|. |.+|+.+|+.|.++|++|+ +.|.+
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~-~~~~~ 44 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADII-AVDIC 44 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEECC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEE-EEecc
Confidence 4588999999995 8899999999999999998 45543
No 259
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.52 E-value=0.12 Score=49.96 Aligned_cols=51 Identities=25% Similarity=0.298 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhCC-----CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 189 VFFATEALLAEHGK-----SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 189 v~~~~~~~~~~~g~-----~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.-|+=+-+|+.+|. .|+.++|.|.|.|.+|+.+++.|...|..-+.|.|.+
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 33444445555553 3889999999999999999999999997555577764
No 260
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.51 E-value=0.51 Score=45.56 Aligned_cols=73 Identities=21% Similarity=0.312 Sum_probs=45.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccC-CCCee-ecCCccccccc
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDF-QGGNA-MDLNDLLVHEC 282 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~-~~~~~-i~~~~ll~~~~ 282 (410)
.-++|+|+|.|.+|+..|..|. .|..|+ +.|.+ .+.+.+..+. ..... .+... -+.++ -.+|
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~-v~d~~----------~~~~~~~~~~--l~~~~~~~i~~~~~~~~--~~~a 74 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVV-LQDVS----------EKALEAAREQ--IPEELLSKIEFTTTLEK--VKDC 74 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEE-EECSC----------HHHHHHHHHH--SCGGGGGGEEEESSCTT--GGGC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEE-EEECC----------HHHHHHHHHH--HHHHHhCCeEEeCCHHH--HcCC
Confidence 3579999999999999999999 999988 66653 3444444433 00000 01111 12233 2588
Q ss_pred ceEeecccCCc
Q 015287 283 DVLVPCALGGV 293 (410)
Q Consensus 283 DvliPaA~~~~ 293 (410)
|++|.|..++.
T Consensus 75 DlVieavpe~~ 85 (293)
T 1zej_A 75 DIVMEAVFEDL 85 (293)
T ss_dssp SEEEECCCSCH
T ss_pred CEEEEcCcCCH
Confidence 99998876553
No 261
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=91.49 E-value=0.24 Score=46.38 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=31.7
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+++|+++.|.|. |.+|+.+|+.|.++|++|+ +.|.+
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~ 39 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVA-IAAKS 39 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEE-EEecc
Confidence 3588999999995 8999999999999999998 55543
No 262
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=91.49 E-value=0.2 Score=48.95 Aligned_cols=105 Identities=25% Similarity=0.368 Sum_probs=64.1
Q ss_pred CeEEEEccChHHH-HHHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCccccc-cc
Q 015287 207 MKFAIQGFGNVGS-WAAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDLLVH-EC 282 (410)
Q Consensus 207 ~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~ll~~-~~ 282 (410)
.||+|+|+|.+|+ ..+..|.+. +++|++|+|.+ ..+++.+... .++... -+.++++.. ++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~---------~~~~~a~~~~-------~~~~~~~~~~~~ll~~~~~ 66 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH---------VNEKAAAPFK-------EKGVNFTADLNELLTDPEI 66 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT---------CCHHHHHHHH-------TTTCEEESCTHHHHSCTTC
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC---------HHHHHHHhhC-------CCCCeEECCHHHHhcCCCC
Confidence 5899999999998 567777654 79999999986 1223322211 112222 244677764 69
Q ss_pred ceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 283 DVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 283 DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
|+++-|. ++..+.+.+.. + +..++|| -|+ | .++++ ..+++|+.+.
T Consensus 67 D~V~i~t-p~~~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~ 120 (349)
T 3i23_A 67 ELITICT-PAHTHYDLAKQAILAGKSVIVE---KPFCDTLEHAEELFALGQEKGVVVM 120 (349)
T ss_dssp CEEEECS-CGGGHHHHHHHHHHTTCEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEeC-CcHHHHHHHHHHHHcCCEEEEE---CCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 9999885 44455444433 2 4468886 353 2 34443 4567787654
No 263
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=91.46 E-value=1.6 Score=42.97 Aligned_cols=32 Identities=34% Similarity=0.582 Sum_probs=28.0
Q ss_pred CeEEEEccChHHHHHHHHHHHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 238 (410)
.||+|-|||.+|+.+.|.+.+. ...||||-|.
T Consensus 4 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~ 36 (337)
T 3v1y_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDP 36 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT
T ss_pred eEEEEECCChHHHHHHHHHHhCCCcEEEEEeCC
Confidence 5899999999999999988765 4789999876
No 264
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.32 E-value=0.16 Score=47.24 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~-~~~r 40 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVL-LTGR 40 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 478999999995 8999999999999999998 5554
No 265
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.29 E-value=7.6 Score=39.61 Aligned_cols=32 Identities=31% Similarity=0.447 Sum_probs=29.0
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+|+|+|.|-||..+|-.|+++|.+|+++ |.+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~-Did 53 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGY-DVN 53 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEE-CSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEE-ECC
Confidence 68999999999999999999999999965 764
No 266
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.19 E-value=0.53 Score=47.54 Aligned_cols=32 Identities=31% Similarity=0.564 Sum_probs=28.1
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++|+|.|.|.||..+|..|.+.|.+|+ +.|.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~-~~d~~ 32 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVI-GVDVS 32 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE-EEECC
Confidence 479999999999999999999999987 45654
No 267
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=91.18 E-value=0.26 Score=49.09 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=27.9
Q ss_pred CeEEEEccChHHHHHHHHHHHC---------CCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH---------GGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~---------GakvVaVsD~~ 239 (410)
.||+|+|+|.+|+.-++.|.+. +++||||+|.+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~ 68 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQD 68 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSS
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCC
Confidence 6999999999999877777643 57999999974
No 268
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=91.15 E-value=0.15 Score=48.71 Aligned_cols=101 Identities=18% Similarity=0.253 Sum_probs=60.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHH----CCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccc-
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHE----HGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLV- 279 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~----~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~- 279 (410)
+-.||+|+|+|.+|+..++.|.+ .+.++++|+|.+-. .+. + +....+.++++.
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~---------------a~~------~-g~~~~~~~ell~~ 63 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL---------------GSL------D-EVRQISLEDALRS 63 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC---------------CEE------T-TEEBCCHHHHHHC
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH---------------HHH------c-CCCCCCHHHHhcC
Confidence 34689999999999988877753 57899999997420 000 0 111123345664
Q ss_pred cccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 280 HECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 280 ~~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
.++|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 64 ~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 120 (294)
T 1lc0_A 64 QEIDVAYICS-ESSSHEDYIRQFLQAGKHVLVEY---PMTLSFAAAQELWELAAQKGRVLH 120 (294)
T ss_dssp SSEEEEEECS-CGGGHHHHHHHHHHTTCEEEEES---CSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEeC-CcHhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHhCCEEE
Confidence 4688888875 34455444433 2 33588873 53 3 34443 3456777654
No 269
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.09 E-value=0.15 Score=46.66 Aligned_cols=103 Identities=15% Similarity=0.042 Sum_probs=59.6
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc----ccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL----VHE 281 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll----~~~ 281 (410)
.++|+|.|+|.+|+.+++.|.+.|. |+ +.|.+ .+.+.+.. . + +.-+.+ . .+..+.| -.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~-vid~~----------~~~~~~~~-~-~-~~~i~g-d-~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FV-LAEDE----------NVRKKVLR-S-G-ANFVHG-D-PTRVSDLEKANVRG 71 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EE-EESCG----------GGHHHHHH-T-T-CEEEES-C-TTCHHHHHHTTCTT
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EE-EEECC----------HHHHHHHh-c-C-CeEEEc-C-CCCHHHHHhcCcch
Confidence 3589999999999999999999998 77 55653 22332222 1 1 111100 0 1122222 137
Q ss_pred cceEeecccCCccc---ccccccc--cceEEEecCCCCCCHHHHHHHHhCCce
Q 015287 282 CDVLVPCALGGVLN---KENAADV--KAKFIIEAANHPTDPEADEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA~~~~I~---~~na~~i--~akiIvEgAN~p~t~~A~~iL~~rGI~ 329 (410)
+|.+|-|.-....| ...++++ +.++|+...| ++-.+.|++.|+-
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~----~~~~~~l~~~G~~ 120 (234)
T 2aef_A 72 ARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER----YENIEQLRMAGAD 120 (234)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEECSS----GGGHHHHHHHTCS
T ss_pred hcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEEECC----HhHHHHHHHCCCC
Confidence 89888776443222 2334444 3578887644 3445678888874
No 270
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=90.99 E-value=0.23 Score=46.81 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r 37 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVA-VLDK 37 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEE-EEeC
Confidence 478999999995 8999999999999999998 4554
No 271
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=90.95 E-value=0.24 Score=46.63 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+.+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 4589999999995 8999999999999999998554
No 272
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=90.92 E-value=0.21 Score=49.67 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=67.0
Q ss_pred CCCCeEEEEccCh---HHHHHHHHHHHCC-CEEEE-EECCCCceeCCCCCCHHHHHHHHHhCCCc--ccCCCCeeecCCc
Q 015287 204 ISNMKFAIQGFGN---VGSWAAKFFHEHG-GKVVA-VSDITGAIKNPNGIDVPALLKYKKSNKSL--NDFQGGNAMDLND 276 (410)
Q Consensus 204 l~g~~vaIqGfGn---VG~~~a~~L~~~G-akvVa-VsD~~G~i~~~~GlDi~~l~~~~~~~g~v--~~~~~~~~i~~~~ 276 (410)
++-.||+|+|+|. +|+.-+..+...+ +++|+ |+|.+ .+...+..++.+.- .-| -+.++
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~----------~~~a~~~a~~~g~~~~~~~-----~~~~~ 74 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDID----------PIRGSAFGEQLGVDSERCY-----ADYLS 74 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSS----------HHHHHHHHHHTTCCGGGBC-----SSHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCC----------HHHHHHHHHHhCCCcceee-----CCHHH
Confidence 4567999999999 9988877776554 89998 78874 45555555443311 112 13356
Q ss_pred cccc------ccceEeecccCCcccccccccc---cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 277 LLVH------ECDVLVPCALGGVLNKENAADV---KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 277 ll~~------~~DvliPaA~~~~I~~~na~~i---~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
++.. ++|+++-|. ++..+.+.+... +..++||= |+ | .++++ ..+++|+.+.
T Consensus 75 ll~~~~~~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 140 (398)
T 3dty_A 75 MFEQEARRADGIQAVSIAT-PNGTHYSITKAALEAGLHVVCEK---PLCFTVEQAENLRELSHKHNRIVG 140 (398)
T ss_dssp HHHHHTTCTTCCSEEEEES-CGGGHHHHHHHHHHTTCEEEECS---CSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHhcccccCCCCCEEEECC-CcHHHHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHHcCCeEE
Confidence 6653 589988664 445554444331 44688874 43 2 34443 4567787665
No 273
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=90.72 E-value=0.44 Score=47.22 Aligned_cols=73 Identities=11% Similarity=0.238 Sum_probs=45.8
Q ss_pred CCCeEEEEc-cChHHHHHHHHHHHCC-CEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCc-ccCCCCeeecCCcccccc
Q 015287 205 SNMKFAIQG-FGNVGSWAAKFFHEHG-GKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSL-NDFQGGNAMDLNDLLVHE 281 (410)
Q Consensus 205 ~g~~vaIqG-fGnVG~~~a~~L~~~G-akvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v-~~~~~~~~i~~~~ll~~~ 281 (410)
+..||+|.| +|.+|+.+++.|.++. .+++++.|.. +.|..++....... +.+ .++. ..+ ++.+. +
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-----~~g~~~~~~~~~~~--~~v~~dl~---~~~-~~~~~-~ 82 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-----KAGQSMESVFPHLR--AQKLPTLV---SVK-DADFS-T 82 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-----TTTSCHHHHCGGGT--TSCCCCCB---CGG-GCCGG-G
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-----hcCCCHHHhCchhc--Ccccccce---ecc-hhHhc-C
Confidence 447999999 9999999999998765 5999998863 34444443321111 110 1110 111 34453 7
Q ss_pred cceEeecc
Q 015287 282 CDVLVPCA 289 (410)
Q Consensus 282 ~DvliPaA 289 (410)
||+++.|+
T Consensus 83 vDvVf~at 90 (359)
T 1xyg_A 83 VDAVFCCL 90 (359)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcC
Confidence 99999886
No 274
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=90.65 E-value=0.32 Score=48.94 Aligned_cols=114 Identities=17% Similarity=0.232 Sum_probs=64.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHCC--CEEEEE-ECCCCceeCCCCCCHHHHHHHHHhCCC----ccc----------CCC
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEHG--GKVVAV-SDITGAIKNPNGIDVPALLKYKKSNKS----LND----------FQG 268 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~G--akvVaV-sD~~G~i~~~~GlDi~~l~~~~~~~g~----v~~----------~~~ 268 (410)
++|+|.|+ |.||+.+++.+.+.. .+++++ ++. +++.+.+..++.+- +.+ +++
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~----------ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~ 74 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR----------NVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG 74 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS----------CHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTT
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC----------CHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhcc
Confidence 78999999 999999999998753 789988 654 35555544433220 000 000
Q ss_pred --CeeecC----CcccccccceEeecccCCccccc-ccccccc--eEEEecCCCCCC----HHHHHHHHhCCceEecc
Q 015287 269 --GNAMDL----NDLLVHECDVLVPCALGGVLNKE-NAADVKA--KFIIEAANHPTD----PEADEILSKKGVVILPD 333 (410)
Q Consensus 269 --~~~i~~----~~ll~~~~DvliPaA~~~~I~~~-na~~i~a--kiIvEgAN~p~t----~~A~~iL~~rGI~v~PD 333 (410)
.+.+.. .++++.++|+++.|..+. ..-. ....+++ +++ -||-.+. +...+..+++|+.++|-
T Consensus 75 ~~~~v~~g~~~~~el~~~~iDvVV~ai~G~-aGl~ptlaAi~aGK~Vv--lANKE~lv~~G~~l~~~A~~~gv~liPV 149 (388)
T 1r0k_A 75 SSVEAAAGADALVEAAMMGADWTMAAIIGC-AGLKATLAAIRKGKTVA--LANKESLVSAGGLMIDAVREHGTTLLPV 149 (388)
T ss_dssp CSSEEEESHHHHHHHHTSCCSEEEECCCSG-GGHHHHHHHHHTTSEEE--ECCSHHHHTTHHHHHHHHHHHTCEEEEC
T ss_pred CCcEEEeCccHHHHHHcCCCCEEEEeCCCH-HHHHHHHHHHHCCCEEE--EeCcHHHHhhHHHHHHHHHHcCCEEEEe
Confidence 011111 134555599999996552 1111 1222333 333 3565532 33345567789999886
No 275
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=90.58 E-value=0.19 Score=47.10 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~-~~~r 59 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVG-LHGT 59 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 588999999985 8999999999999999998 5554
No 276
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=90.54 E-value=0.8 Score=44.56 Aligned_cols=54 Identities=19% Similarity=0.230 Sum_probs=45.4
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 181 REAATGLGVFFATEALLAEHGKSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-.+.|-+|+.. +|++.+.+++|++++|.|- .-||+-++.+|.++++.|. ++.++
T Consensus 158 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVT-i~Hs~ 212 (303)
T 4b4u_A 158 YGSATPAGIMT----ILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVT-ICHSR 212 (303)
T ss_dssp CCCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTT
T ss_pred ccCccHHHHHH----HHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEE-EecCC
Confidence 35789988765 4567899999999999995 6789999999999999987 77764
No 277
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=90.52 E-value=0.45 Score=46.59 Aligned_cols=107 Identities=18% Similarity=0.273 Sum_probs=65.5
Q ss_pred CCCeEEEEccChHHHH-HHHHHHHC-CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeee-cCCccccc-
Q 015287 205 SNMKFAIQGFGNVGSW-AAKFFHEH-GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAM-DLNDLLVH- 280 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i-~~~~ll~~- 280 (410)
+-.||+|+|+|++|+. .+..|.+. +++|+||+|.+- + . .. ..|++.... +.++++..
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~-----~-----~---~~------~~~~~~~~~~~~~~ll~~~ 64 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSK-----E-----L---SK------ERYPQASIVRSFKELTEDP 64 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSC-----C-----G---GG------TTCTTSEEESCSHHHHTCT
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCH-----H-----H---HH------HhCCCCceECCHHHHhcCC
Confidence 4478999999999986 67777654 899999999862 1 1 11 123333322 44677754
Q ss_pred ccceEeecccCCccccccccc-c--cceEEEecCCCCCCHHHHH---HHHhCCceEe
Q 015287 281 ECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPTDPEADE---ILSKKGVVIL 331 (410)
Q Consensus 281 ~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~t~~A~~---iL~~rGI~v~ 331 (410)
++|+++-|. ++..+.+.+.. + +..++||=-=.....++++ ..+++|+.+.
T Consensus 65 ~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (362)
T 3fhl_A 65 EIDLIVVNT-PDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLS 120 (362)
T ss_dssp TCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEeC-ChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 699999884 44555444433 2 4468888421112244544 3556777665
No 278
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.40 E-value=0.26 Score=42.84 Aligned_cols=31 Identities=32% Similarity=0.329 Sum_probs=28.6
Q ss_pred eEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 208 KFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 208 ~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.|+|+|.|..|..+|..|+++|.+|+ |-|..
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~-v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVH-LFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEE-EECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEE-EEECC
Confidence 59999999999999999999999988 88854
No 279
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=90.38 E-value=0.18 Score=47.63 Aligned_cols=85 Identities=8% Similarity=0.090 Sum_probs=44.2
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccccceEe
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHECDVLV 286 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~~Dvli 286 (410)
++|+|+|.|++|+.+++.|.+. .+|+.+.|.+ .+.+.+..++.+. . ..+.++++. +||++|
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~----------~~~~~~~~~~~g~--~-----~~~~~~~~~-~~DvVi 63 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRS----------IDRARNLAEVYGG--K-----AATLEKHPE-LNGVVF 63 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSS----------HHHHHHHHHHTCC--C-----CCSSCCCCC----CEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCC----------HHHHHHHHHHcCC--c-----cCCHHHHHh-cCCEEE
Confidence 4799999999999999999876 6665566653 3444444333221 1 113344443 688888
Q ss_pred ecccCCcccccccccc--cceEEEecC
Q 015287 287 PCALGGVLNKENAADV--KAKFIIEAA 311 (410)
Q Consensus 287 PaA~~~~I~~~na~~i--~akiIvEgA 311 (410)
.|.-...+ .+.+..+ .-++|+.-+
T Consensus 64 lav~~~~~-~~v~~~l~~~~~ivi~~s 89 (276)
T 2i76_A 64 VIVPDRYI-KTVANHLNLGDAVLVHCS 89 (276)
T ss_dssp ECSCTTTH-HHHHTTTCCSSCCEEECC
T ss_pred EeCChHHH-HHHHHHhccCCCEEEECC
Confidence 77655442 3333333 224555544
No 280
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=90.25 E-value=1.2 Score=37.99 Aligned_cols=30 Identities=20% Similarity=0.453 Sum_probs=26.6
Q ss_pred CCeEEEEcc----ChHHHHHHHHHHHCCCEEEEE
Q 015287 206 NMKFAIQGF----GNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 206 g~~vaIqGf----GnVG~~~a~~L~~~GakvVaV 235 (410)
-++|+|+|. |+.|+.+++.|.+.|++|..|
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v 46 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV 46 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe
Confidence 468999999 899999999999999986654
No 281
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=90.23 E-value=0.099 Score=48.43 Aligned_cols=54 Identities=15% Similarity=0.178 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHH--HHCCCEEEEEECCCC
Q 015287 186 GLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFF--HEHGGKVVAVSDITG 240 (410)
Q Consensus 186 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L--~~~GakvVaVsD~~G 240 (410)
||-|-.-.+..-+.+|.+ +..+|+|.|.|+.|+.+++.+ .+.|.++||+.|.+.
T Consensus 65 GY~V~~L~~~i~~~Lg~~-~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp 120 (212)
T 3keo_A 65 GYDVKKLMNFFAEILNDH-STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDS 120 (212)
T ss_dssp SEEHHHHHHHHHHHTTTT-SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTT
T ss_pred CEEHHHHHHHHHHHhCCC-CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCc
Confidence 455555555544566766 457999999999999999874 457899999999753
No 282
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.18 E-value=1.3 Score=42.52 Aligned_cols=111 Identities=15% Similarity=0.144 Sum_probs=62.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCccc-CCCCee------ecCCcccc
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLND-FQGGNA------MDLNDLLV 279 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~-~~~~~~------i~~~~ll~ 279 (410)
++|+|.|.|++|..+|..|.+.|..|+ +.+.+. .+.+.+ .+-.+.. +.+... .++.+-+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~-~~~r~~---------~~~i~~---~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVS-VVSRSD---------YETVKA---KGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEE-EECSTT---------HHHHHH---HCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEE-EEeCCh---------HHHHHh---CCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 689999999999999999999999887 445431 233322 1112222 111111 11111122
Q ss_pred cccceEeecccCCccccccccc----cc-ceEEEecCCCCCC-HHHHHHHHhCCceEe
Q 015287 280 HECDVLVPCALGGVLNKENAAD----VK-AKFIIEAANHPTD-PEADEILSKKGVVIL 331 (410)
Q Consensus 280 ~~~DvliPaA~~~~I~~~na~~----i~-akiIvEgAN~p~t-~~A~~iL~~rGI~v~ 331 (410)
.++|++|-|--...+. +.++. ++ -.+|+-..|+--. ....+.|-...|+..
T Consensus 70 ~~~DlVilavK~~~~~-~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~vl~g 126 (320)
T 3i83_A 70 TKPDCTLLCIKVVEGA-DRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVISG 126 (320)
T ss_dssp SCCSEEEECCCCCTTC-CHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCEEEE
T ss_pred CCCCEEEEecCCCChH-HHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcEEEE
Confidence 4799999886444332 33333 32 2477888888643 445555655545443
No 283
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.16 E-value=0.28 Score=45.70 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=30.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++++|.|.|.|-+|+++++.|.++|.+|++++-.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4679999999999999999999999999977543
No 284
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.11 E-value=0.18 Score=49.31 Aligned_cols=35 Identities=31% Similarity=0.367 Sum_probs=30.6
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.+
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~-~~~~~ 48 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVT-VGLRS 48 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEE-EECCT
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEE-EEECC
Confidence 567899999999999999999999999887 66654
No 285
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=89.93 E-value=0.4 Score=48.13 Aligned_cols=109 Identities=10% Similarity=0.138 Sum_probs=66.7
Q ss_pred CCCCeEEEEccCh---HHHHHHHHHHHCC-CEEEE-EECCCCceeCCCCCCHHHHHHHHHhCCCc--ccCCCCeeecCCc
Q 015287 204 ISNMKFAIQGFGN---VGSWAAKFFHEHG-GKVVA-VSDITGAIKNPNGIDVPALLKYKKSNKSL--NDFQGGNAMDLND 276 (410)
Q Consensus 204 l~g~~vaIqGfGn---VG~~~a~~L~~~G-akvVa-VsD~~G~i~~~~GlDi~~l~~~~~~~g~v--~~~~~~~~i~~~~ 276 (410)
++-.||+|+|+|. +|..-+..+...+ +++|+ |+|.+ .+...+..++.+-- .-| -+.++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~----------~~~a~~~a~~~g~~~~~~~-----~~~~~ 99 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSST----------PEKAEASGRELGLDPSRVY-----SDFKE 99 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSS----------HHHHHHHHHHHTCCGGGBC-----SCHHH
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCC----------HHHHHHHHHHcCCCccccc-----CCHHH
Confidence 4567999999999 9988777776654 78996 88874 45555544443211 112 23356
Q ss_pred cccc------ccceEeecccCCccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHhCCceEe
Q 015287 277 LLVH------ECDVLVPCALGGVLNKENAAD-V--KAKFIIEAANHPT--D-PEADE---ILSKKGVVIL 331 (410)
Q Consensus 277 ll~~------~~DvliPaA~~~~I~~~na~~-i--~akiIvEgAN~p~--t-~~A~~---iL~~rGI~v~ 331 (410)
++.. ++|+++-|. ++..+.+.+.. + +..++||= |+ | .++++ ..+++|+.+.
T Consensus 100 ll~~~~~~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 165 (417)
T 3v5n_A 100 MAIREAKLKNGIEAVAIVT-PNHVHYAAAKEFLKRGIHVICDK---PLTSTLADAKKLKKAADESDALFV 165 (417)
T ss_dssp HHHHHHHCTTCCSEEEECS-CTTSHHHHHHHHHTTTCEEEEES---SSCSSHHHHHHHHHHHHHCSSCEE
T ss_pred HHhcccccCCCCcEEEECC-CcHHHHHHHHHHHhCCCeEEEEC---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 7754 589999774 45555554433 2 44688884 42 2 34544 4567787655
No 286
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.78 E-value=0.59 Score=45.54 Aligned_cols=33 Identities=33% Similarity=0.311 Sum_probs=28.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-++|+|+|.|.+|+..|..|.+.|.+|+ +.|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~-l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVK-LYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEE-EECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 3689999999999999999999999987 66764
No 287
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=89.74 E-value=0.47 Score=44.55 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+.+|+.|.++|++|+ +.|.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r 65 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVI-LHGV 65 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 589999999995 8999999999999999998 5554
No 288
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.72 E-value=0.3 Score=49.56 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++++++|.|.|.|..|..+|++|+++|++|. ++|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~-~~D~~ 41 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVT-VNDGK 41 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEE-EEESS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEeCC
Confidence 4789999999999999999999999999998 78875
No 289
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=89.72 E-value=0.37 Score=45.47 Aligned_cols=36 Identities=22% Similarity=0.204 Sum_probs=31.1
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++++.|.|. |.+|+++|+.|.++|++|+. .|.+
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~-~~r~ 42 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVAL-VAKS 42 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEE-EESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EECC
Confidence 578999999995 89999999999999999984 5543
No 290
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=89.57 E-value=0.18 Score=46.59 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=25.1
Q ss_pred CCeEEEEccChHHHHHHHH--HHHCCCEEEEEECCC
Q 015287 206 NMKFAIQGFGNVGSWAAKF--FHEHGGKVVAVSDIT 239 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~--L~~~GakvVaVsD~~ 239 (410)
..+|+|.|.|++|+.+++. +...|.++||+.|.+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~d 120 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDIN 120 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESC
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCC
Confidence 3689999999999999994 446789999999975
No 291
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=89.52 E-value=0.21 Score=51.39 Aligned_cols=109 Identities=13% Similarity=0.147 Sum_probs=67.9
Q ss_pred CCCeEEEEcc----ChHHHHHHHHHHHC--CCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCee-ecCCcc
Q 015287 205 SNMKFAIQGF----GNVGSWAAKFFHEH--GGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNA-MDLNDL 277 (410)
Q Consensus 205 ~g~~vaIqGf----GnVG~~~a~~L~~~--GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~-i~~~~l 277 (410)
+-.||+|+|+ |.+|...++.|.+. +++||+|+|.+ .+.+.+..++.+ .+.... -+.+++
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~----------~~~a~~~a~~~g----~~~~~~~~d~~el 103 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPT----------LKSSLQTIEQLQ----LKHATGFDSLESF 103 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSC----------HHHHHHHHHHTT----CTTCEEESCHHHH
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCC----------HHHHHHHHHHcC----CCcceeeCCHHHH
Confidence 3468999999 99999989888875 78999999974 445544444432 111111 234567
Q ss_pred cc-cccceEeecccCCccccccccc-c--c------ceEEEecCCCCC--C-HHHHH---HHHhCC-ceEe
Q 015287 278 LV-HECDVLVPCALGGVLNKENAAD-V--K------AKFIIEAANHPT--D-PEADE---ILSKKG-VVIL 331 (410)
Q Consensus 278 l~-~~~DvliPaA~~~~I~~~na~~-i--~------akiIvEgAN~p~--t-~~A~~---iL~~rG-I~v~ 331 (410)
++ .++|+++-|. ++..+.+.+.. + . ..++||= |+ | .++++ ..+++| +.+.
T Consensus 104 l~~~~vD~V~I~t-p~~~H~~~~~~al~aG~~~~~~khVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~~ 170 (479)
T 2nvw_A 104 AQYKDIDMIVVSV-KVPEHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQTI 170 (479)
T ss_dssp HHCTTCSEEEECS-CHHHHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEEE
T ss_pred hcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCCcCCceeEEEeC---CCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 75 4799999885 33344433332 2 3 3488884 53 3 34444 356778 6654
No 292
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.49 E-value=0.93 Score=44.37 Aligned_cols=42 Identities=31% Similarity=0.445 Sum_probs=33.9
Q ss_pred HHHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEEC
Q 015287 196 LLAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 196 ~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 237 (410)
+++..+....|.+|.|+|.|.||..+++++...|++|++++.
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~ 219 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST 219 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 344444444789999999999999999999999999986543
No 293
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.46 E-value=0.64 Score=45.92 Aligned_cols=97 Identities=13% Similarity=0.005 Sum_probs=56.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe-----eecCCccc-
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN-----AMDLNDLL- 278 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~-----~i~~~~ll- 278 (410)
..++|+|.|.|++|..+|..|.+.|..|+ +.|.+ .+.+.+..+.+.....+|+.. ..+ .++-
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~-l~~r~----------~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~e 95 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVR-LWSYE----------SDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKA 95 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEE-EECSC----------HHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEE-EEeCC----------HHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHH
Confidence 34789999999999999999999999887 55653 333333333322222222211 111 1221
Q ss_pred -ccccceEeecccCCcccccccc----ccc-ceEEEecCCCC
Q 015287 279 -VHECDVLVPCALGGVLNKENAA----DVK-AKFIIEAANHP 314 (410)
Q Consensus 279 -~~~~DvliPaA~~~~I~~~na~----~i~-akiIvEgAN~p 314 (410)
-.++|++|-|--... ..+.++ .++ -.+|+..+|+-
T Consensus 96 a~~~aDvVilaVp~~~-~~~vl~~i~~~l~~~~ivvs~~kGi 136 (356)
T 3k96_A 96 SLEGVTDILIVVPSFA-FHEVITRMKPLIDAKTRIAWGTKGL 136 (356)
T ss_dssp HHTTCCEEEECCCHHH-HHHHHHHHGGGCCTTCEEEECCCSC
T ss_pred HHhcCCEEEECCCHHH-HHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 137999998863332 222222 232 35788888865
No 294
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=89.39 E-value=1.4 Score=42.66 Aligned_cols=146 Identities=13% Similarity=0.127 Sum_probs=79.1
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHHHhCCCCCCCeEEEEccChHHHHHHHHHHH-CCCEEEEEECCCCceeCCCC
Q 015287 169 TGKPIDLGGSLGREAATGLGVFFATEALLAEHGKSISNMKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDITGAIKNPNG 247 (410)
Q Consensus 169 tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~~~~G 247 (410)
||.|..+ ..-...|++=...+---+.+.+.. ...++++|.|.|..|+..++.|.+ .+.+-|.|.|.+
T Consensus 88 tG~p~a~---ld~~~lT~~RTaA~s~laa~~La~-~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------- 155 (313)
T 3hdj_A 88 DGRPLAT---CDAGTLTRKRTAACTVLAAGALAR-PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-------- 155 (313)
T ss_dssp TCCEEEE---ECSHHHHHHHHHHHHHHHHHHHSC-TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--------
T ss_pred CCCEEEE---EcCchhhhHHHHHHHHHHHHhhcc-CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--------
Confidence 6777542 121234443322222223344433 356899999999999999999876 455545477765
Q ss_pred CCHHHHHHHHHh-CCCcccCCCCeeecCCcccccccceEeecccC--CcccccccccccceEEEecCCCCCCHHHHHHHH
Q 015287 248 IDVPALLKYKKS-NKSLNDFQGGNAMDLNDLLVHECDVLVPCALG--GVLNKENAADVKAKFIIEAANHPTDPEADEILS 324 (410)
Q Consensus 248 lDi~~l~~~~~~-~g~v~~~~~~~~i~~~~ll~~~~DvliPaA~~--~~I~~~na~~i~akiIvEgAN~p~t~~A~~iL~ 324 (410)
..+++.+...+ .+ +. ....+.++.+ .++||++-|... ..+..+-.+. .+.++.=|+..|-..|.+..+.
T Consensus 156 -~a~~la~~l~~~~g-~~----~~~~~~~eav-~~aDIVi~aT~s~~pvl~~~~l~~-G~~V~~vGs~~p~~~El~~~~~ 227 (313)
T 3hdj_A 156 -ASPEILERIGRRCG-VP----ARMAAPADIA-AQADIVVTATRSTTPLFAGQALRA-GAFVGAIGSSLPHTRELDDEAL 227 (313)
T ss_dssp -CCHHHHHHHHHHHT-SC----EEECCHHHHH-HHCSEEEECCCCSSCSSCGGGCCT-TCEEEECCCSSTTCCCCCHHHH
T ss_pred -HHHHHHHHHHHhcC-Ce----EEEeCHHHHH-hhCCEEEEccCCCCcccCHHHcCC-CcEEEECCCCCCchhhcCHHHH
Confidence 33455443322 11 10 1111223333 479999988643 3444332222 5677777888775455554444
Q ss_pred hCCceEeccc
Q 015287 325 KKGVVILPDI 334 (410)
Q Consensus 325 ~rGI~v~PD~ 334 (410)
+++-.++-|.
T Consensus 228 ~~a~~v~vD~ 237 (313)
T 3hdj_A 228 RRARAVVVEW 237 (313)
T ss_dssp HHCSEEEESC
T ss_pred hcCCEEEECC
Confidence 5554444553
No 295
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.38 E-value=0.27 Score=46.56 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=55.6
Q ss_pred CeEEEEccChHHHHHHHHHHHC-----C-CEEEEEECCCCceeCCCCCCHHHHHHHHHhCC-CcccCCCC------eeec
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEH-----G-GKVVAVSDITGAIKNPNGIDVPALLKYKKSNK-SLNDFQGG------NAMD 273 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~-----G-akvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g-~v~~~~~~------~~i~ 273 (410)
++|+|.|.|++|+.+|..|.+. | ..|+ +.|. . +.+.+..++.+ .+...++. ...+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r-~----------~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 76 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVS-WIAR-G----------AHLEAIRAAGGLRVVTPSRDFLARPTCVTD 76 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEE-EECC-H----------HHHHHHHHHTSEEEECSSCEEEECCSEEES
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEE-EEEc-H----------HHHHHHHhcCCeEEEeCCCCeEEecceEec
Confidence 5899999999999999999988 8 8877 4443 1 22333333122 22221111 1112
Q ss_pred CCcccccccceEeecccCCccccccccc----cc-ceEEEecCCCCCC
Q 015287 274 LNDLLVHECDVLVPCALGGVLNKENAAD----VK-AKFIIEAANHPTD 316 (410)
Q Consensus 274 ~~~ll~~~~DvliPaA~~~~I~~~na~~----i~-akiIvEgAN~p~t 316 (410)
+.+. ..++|++|-|--...+ .+.++. ++ -++|+--.|+.-+
T Consensus 77 ~~~~-~~~~D~vil~vk~~~~-~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 77 NPAE-VGTVDYILFCTKDYDM-ERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp CHHH-HCCEEEEEECCSSSCH-HHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred Cccc-cCCCCEEEEecCcccH-HHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 2222 2479999998655443 333332 32 3578888888643
No 296
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.32 E-value=0.45 Score=48.91 Aligned_cols=32 Identities=25% Similarity=0.168 Sum_probs=29.4
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++|+|+|.|.+|+.+|..|.+.|..|+ +.|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~-l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETF-LVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEE-EEECc
Confidence 689999999999999999999999998 67875
No 297
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.22 E-value=0.41 Score=45.31 Aligned_cols=32 Identities=31% Similarity=0.269 Sum_probs=28.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++|+|+|.|++|+.+|+.|.+.|.+|+ +.|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~-l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVT-AYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEeCC
Confidence 689999999999999999999999988 66764
No 298
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=89.20 E-value=0.45 Score=46.62 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=30.9
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+.+|+.|.++|++|+. .+.
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl-~~r 77 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVI-AAK 77 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEE-EES
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEE-EEC
Confidence 489999999995 89999999999999999984 444
No 299
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.11 E-value=0.19 Score=47.17 Aligned_cols=36 Identities=19% Similarity=0.434 Sum_probs=30.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++|.|.|.|.+|+.+++.|...|..-+.+.|.+
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 456899999999999999999999998444488875
No 300
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=89.03 E-value=0.51 Score=46.50 Aligned_cols=32 Identities=22% Similarity=0.200 Sum_probs=28.0
Q ss_pred CeEEEEc-cChHHHHHHHHHHHCC-CEEEEEECC
Q 015287 207 MKFAIQG-FGNVGSWAAKFFHEHG-GKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqG-fGnVG~~~a~~L~~~G-akvVaVsD~ 238 (410)
+||+|.| +|.+|+.+++.|.++. ..+++++|.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~ 38 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR 38 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence 6899999 8999999999998765 589999885
No 301
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=88.96 E-value=0.26 Score=46.34 Aligned_cols=35 Identities=17% Similarity=0.118 Sum_probs=28.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+.+|+.|.++|++|+ +.|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~r 60 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVA-LAGR 60 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEEC
Confidence 467889999885 8999999999999999998 5555
No 302
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.96 E-value=0.82 Score=47.14 Aligned_cols=33 Identities=30% Similarity=0.453 Sum_probs=29.1
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-++|+|+|.|++|+.+|..|.+.|..|+ +.|.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~-l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVL-LYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEE-EECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEE-EEECC
Confidence 3589999999999999999999999988 66764
No 303
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.84 E-value=0.5 Score=46.11 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=27.2
Q ss_pred eEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 208 KFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 208 ~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+|+|+|.|++|..+|..|.+.|..|+ +.|.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~-~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVC-VWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEE-EECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEE-EEECC
Confidence 89999999999999999999998876 55653
No 304
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.82 E-value=0.52 Score=44.98 Aligned_cols=41 Identities=22% Similarity=0.288 Sum_probs=32.6
Q ss_pred HHhCCCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 198 AEHGKSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 198 ~~~g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+.+-..|+||++.|.|. +.+|+.+|+.|.+.|++|+ ++|.+
T Consensus 21 ~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~-i~~r~ 62 (273)
T 4fgs_A 21 QSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVF-ITGRR 62 (273)
T ss_dssp ----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred hhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEE-EEECC
Confidence 34445699999999996 7799999999999999998 77763
No 305
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=88.70 E-value=0.51 Score=43.89 Aligned_cols=53 Identities=25% Similarity=0.211 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHH-HhCCCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 185 TGLGVFFATEALLA-EHGKSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 185 Tg~Gv~~~~~~~~~-~~g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
|.-|+-.+.+.+.- ....+++|+++.|.|. |.+|+.+|+.|.++|++|+.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 7 HSSGVDLGTENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp -----------------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cccccccCcceehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34444444444443 4456789999999995 89999999999999999985544
No 306
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.57 E-value=0.45 Score=48.59 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=31.6
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 202 KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 202 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
.+++|++|.|.|.|.||...++.|.+.|++|+-|+
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~ 42 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNA 42 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEE
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEc
Confidence 46889999999999999999999999999998444
No 307
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.45 E-value=0.46 Score=46.82 Aligned_cols=35 Identities=37% Similarity=0.384 Sum_probs=31.3
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++|.|.|.|.+|+.+++.+...|++|+ +.|.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~-v~dr~ 199 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQ-IFDIN 199 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEeCC
Confidence 667999999999999999999999999877 67764
No 308
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=88.39 E-value=0.61 Score=43.99 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=32.3
Q ss_pred CCCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 201 GKSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 201 g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
..+|+||++.|.|. +.+|+.+|+.|.+.|++|+ +.|.
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv-~~~r 39 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPV-VFAR 39 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEEC
Confidence 45799999999995 7899999999999999998 5554
No 309
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.37 E-value=0.21 Score=51.13 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=29.6
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.++|+|.|+|.||+.+|+.|.+.|..|+ |-|.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~-vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDIT-IVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEE-EEESC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEE-EEECC
Confidence 4789999999999999999999999998 66763
No 310
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=88.34 E-value=0.65 Score=40.34 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=28.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 205 SNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 205 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
++++|.|.|. |.+|+++++.|.++|.+|++++-
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 3478999997 99999999999999999996643
No 311
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.19 E-value=0.43 Score=45.09 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+|+||++.|.|. +.+|+.+|+.|.++|++|+ ++|.+
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv-i~~~~ 42 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVI-LNDIR 42 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-ECCSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEECC
Confidence 689999999985 8899999999999999998 77763
No 312
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.00 E-value=0.45 Score=43.97 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=30.7
Q ss_pred CCCCCeEEEEcc-C-hHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-G-NVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-G-nVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.++++++.|.|. | .+|+++++.|.++|++|+ +.|.
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~-~~~r 55 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVV-ISDY 55 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEE-EecC
Confidence 478999999998 8 599999999999999998 4554
No 313
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=87.92 E-value=0.5 Score=44.58 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=31.6
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+|+||++.|.|. +.+|+.+|+.|.++|++|+ ++|.+
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~-~~~r~ 44 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVL-TTARA 44 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEE-EEESS
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEE-EEECC
Confidence 689999999995 7899999999999999998 56653
No 314
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=87.91 E-value=1.1 Score=43.53 Aligned_cols=41 Identities=27% Similarity=0.435 Sum_probs=32.8
Q ss_pred HHHhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEEC
Q 015287 197 LAEHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 197 ~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 237 (410)
++..+....|.+|.|+|.|.||..+++++...|++|+++..
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~ 212 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISS 212 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 33334433789999999999999999999999999986543
No 315
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.90 E-value=0.57 Score=44.57 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=28.8
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++|+|+|.|++|..+|..|.+.|.+|+ +.|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~-~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVV-LVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEECC
Confidence 589999999999999999999999987 66764
No 316
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.83 E-value=0.34 Score=45.44 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=32.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++|.|.|.|.+|+.+++.|...|..-+.+.|.+
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 567899999999999999999999998766788865
No 317
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=87.74 E-value=0.66 Score=43.37 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=31.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 43 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVM-IVGR 43 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 4688999999995 8999999999999999998 5555
No 318
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.62 E-value=0.55 Score=44.33 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=31.9
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+|+||++.|.|. +.+|+.+|+.|.+.|++|+ ++|.+
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv-~~~~~ 40 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVV-AVELL 40 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEECC
Confidence 689999999995 7899999999999999998 67763
No 319
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=87.59 E-value=0.5 Score=49.15 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=29.7
Q ss_pred CCC-CeEEEEccChHHHHHHHHHHHC------CCEEEEEECC
Q 015287 204 ISN-MKFAIQGFGNVGSWAAKFFHEH------GGKVVAVSDI 238 (410)
Q Consensus 204 l~g-~~vaIqGfGnVG~~~a~~L~~~------GakvVaVsD~ 238 (410)
++| ++|+|+|+|++|..+|+-|.+. |.+|+ |.+.
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~Vi-Vg~r 91 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-IGLR 91 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEE-EEEC
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEE-EEeC
Confidence 788 9999999999999999999988 99887 4443
No 320
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=87.53 E-value=0.8 Score=41.31 Aligned_cols=34 Identities=32% Similarity=0.469 Sum_probs=30.3
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEE
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 235 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+.+
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~ 37 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAV 37 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 3578999999996 999999999999999999854
No 321
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.49 E-value=0.86 Score=42.16 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+.+.+.+
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~ 42 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGA 42 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 588999999995 8899999999999999999665653
No 322
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=87.48 E-value=0.75 Score=42.00 Aligned_cols=36 Identities=31% Similarity=0.393 Sum_probs=31.3
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~-~~~r 41 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVV-VADI 41 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEcC
Confidence 4578999999995 9999999999999999988 4554
No 323
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=87.44 E-value=1.8 Score=36.30 Aligned_cols=100 Identities=18% Similarity=0.132 Sum_probs=57.4
Q ss_pred CeEEEEcc----ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCcccccc-
Q 015287 207 MKFAIQGF----GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLLVHE- 281 (410)
Q Consensus 207 ~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll~~~- 281 (410)
++|+|.|. +.+|..+.+.|.+.|++|+.|-=..+.+. .+.-|+. -.++-..|
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~------------------G~~~y~s-----l~dlp~vDl 61 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVL------------------GKTIINE-----RPVIEGVDT 61 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEET------------------TEECBCS-----CCCCTTCCE
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCC------------------CeeccCC-----hHHCCCCCE
Confidence 68999997 78999999999999999887632211110 1112221 12222211
Q ss_pred cceEeeccc-CCcccccccccccceEEEecCCCCCCHHHHHHHHhCCceEec
Q 015287 282 CDVLVPCAL-GGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKGVVILP 332 (410)
Q Consensus 282 ~DvliPaA~-~~~I~~~na~~i~akiIvEgAN~p~t~~A~~iL~~rGI~v~P 332 (410)
++|++|+.. ..++.+--...+++ ++. .-+...+++.++.++.||.++|
T Consensus 62 avi~~p~~~v~~~v~e~~~~g~k~-v~~--~~G~~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 62 VTLYINPQNQLSEYNYILSLKPKR-VIF--NPGTENEELEEILSENGIEPVI 110 (122)
T ss_dssp EEECSCHHHHGGGHHHHHHHCCSE-EEE--CTTCCCHHHHHHHHHTTCEEEE
T ss_pred EEEEeCHHHHHHHHHHHHhcCCCE-EEE--CCCCChHHHHHHHHHcCCeEEC
Confidence 334444432 23333222222343 333 2234678999999999999885
No 324
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.40 E-value=0.64 Score=43.18 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=27.9
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++|+|.|.|++|+.+|..|.+.|..|+ +.|.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQ-GWLRV 32 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEE-EEEcC
Confidence 479999999999999999999999987 45654
No 325
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=87.36 E-value=0.61 Score=45.00 Aligned_cols=32 Identities=31% Similarity=0.382 Sum_probs=29.4
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++|+|+|.|.+|..+|..|+++|.+|+ |-|.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~-v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVT-IYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEE-EEecC
Confidence 689999999999999999999999988 87754
No 326
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.27 E-value=0.7 Score=42.67 Aligned_cols=36 Identities=25% Similarity=0.223 Sum_probs=30.2
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+.+|+.|.++|++|+ +.|.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r 39 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVF-AGRR 39 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEeC
Confidence 3578999999995 8899999999999999988 5555
No 327
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=87.14 E-value=0.85 Score=45.67 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=27.1
Q ss_pred CeEEEEccChHHHHHHHHHHHCCC---EEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGG---KVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~Ga---kvVaVsD~~ 239 (410)
++|+|.|.|.+|+.+++.|.+.|. +|+ ++|.+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~-v~~r~ 36 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHIT-LASRT 36 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEE-EEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEE-EEECC
Confidence 589999999999999999999884 554 77764
No 328
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=87.03 E-value=0.72 Score=41.73 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.+.+.
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 367899999985 999999999999999999966454
No 329
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.02 E-value=0.69 Score=44.04 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=30.9
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
++++++|.|.|. |.+|+++++.|.++|++|+++.
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~ 51 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVID 51 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 488999999996 9999999999999999999664
No 330
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=87.02 E-value=0.62 Score=44.02 Aligned_cols=34 Identities=32% Similarity=0.495 Sum_probs=28.6
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++|.|.|. |.+|+++++.|.++|++|+++ |.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~-~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGA-DR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-EC
Confidence 36789999996 999999999999999999854 44
No 331
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.95 E-value=1.9 Score=41.42 Aligned_cols=99 Identities=17% Similarity=0.250 Sum_probs=56.0
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCe------eecCCc
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGN------AMDLND 276 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~------~i~~~~ 276 (410)
+...++|+|.|.|++|..+|..|.+.|..|+.+ .+ .+.+.+..+++-.+. .++.. ..++.+
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~--~~----------~~~~~~i~~~g~~~~-~~~~~~~~~~~~~~~~~ 82 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI--AR----------PQHVQAIEATGLRLE-TQSFDEQVKVSASSDPS 82 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE--CC----------HHHHHHHHHHCEEEE-CSSCEEEECCEEESCGG
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE--Ec----------HhHHHHHHhCCeEEE-cCCCcEEEeeeeeCCHH
Confidence 345689999999999999999999999998855 32 123333333322221 22221 112212
Q ss_pred ccccccceEeecccCCccccccccc----cc-ceEEEecCCCCCC
Q 015287 277 LLVHECDVLVPCALGGVLNKENAAD----VK-AKFIIEAANHPTD 316 (410)
Q Consensus 277 ll~~~~DvliPaA~~~~I~~~na~~----i~-akiIvEgAN~p~t 316 (410)
.. .++|++|-|.-...+ .+.++. ++ -.+|+-..|+--.
T Consensus 83 ~~-~~~D~vilavk~~~~-~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 83 AV-QGADLVLFCVKSTDT-QSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp GG-TTCSEEEECCCGGGH-HHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred Hc-CCCCEEEEEcccccH-HHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 22 479999988654433 333333 22 2477778887543
No 332
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=86.75 E-value=0.95 Score=41.69 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=31.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 39 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVL-VAR 39 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EcC
Confidence 4578999999995 99999999999999999984 454
No 333
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=86.74 E-value=1.6 Score=42.25 Aligned_cols=33 Identities=30% Similarity=0.540 Sum_probs=29.6
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
-.|.+|.|.|.|.||..+++++...|++|+++.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~ 207 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFA 207 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEe
Confidence 368899999999999999999999999998653
No 334
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.74 E-value=0.62 Score=43.10 Aligned_cols=32 Identities=13% Similarity=0.200 Sum_probs=28.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEEC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 237 (410)
.++|.|.|.|.+|+++++.|.++|.+|++++-
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEc
Confidence 37899999999999999999999999997654
No 335
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=86.71 E-value=0.81 Score=42.98 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=31.3
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|+++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~-~~~r 48 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVI-MAVR 48 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEEC
Confidence 3588999999995 8999999999999999998 4554
No 336
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.68 E-value=0.83 Score=42.47 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=31.4
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADII-LFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEE-EEccc
Confidence 478999999995 8999999999999999998 55554
No 337
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=86.59 E-value=0.84 Score=42.57 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=31.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.+
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~-~~~r~ 43 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIA-ICDRC 43 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEE-EEeCC
Confidence 588999999995 8999999999999999988 55553
No 338
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=86.57 E-value=0.83 Score=43.08 Aligned_cols=34 Identities=26% Similarity=0.263 Sum_probs=30.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
+++++|.|.|. |-+|+++++.|.++|++|+++..
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 67899999997 99999999999999999996543
No 339
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=86.55 E-value=0.89 Score=42.37 Aligned_cols=37 Identities=24% Similarity=0.464 Sum_probs=32.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~ 44 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVV-LADLP 44 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEECT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEcCC
Confidence 4588999999995 8999999999999999998 55653
No 340
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.48 E-value=0.75 Score=43.01 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=28.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
+||.|.|. |-+|+++++.|.++|.+|++++-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 58999997 99999999999999999998763
No 341
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.38 E-value=0.83 Score=43.16 Aligned_cols=36 Identities=14% Similarity=0.325 Sum_probs=31.4
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~-~~~r 79 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIA-IAYL 79 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3589999999995 8999999999999999998 5554
No 342
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.34 E-value=0.84 Score=41.97 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 44 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVI-LLGR 44 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEeC
Confidence 488999999996 8999999999999999998 5555
No 343
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=86.29 E-value=0.89 Score=41.82 Aligned_cols=36 Identities=17% Similarity=0.393 Sum_probs=30.8
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~r 39 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVL-GLDL 39 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3578999999995 8999999999999999998 4554
No 344
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=86.29 E-value=0.98 Score=41.00 Aligned_cols=35 Identities=17% Similarity=0.350 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.+ |.
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~-~r 43 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILI-DR 43 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eC
Confidence 578999999985 999999999999999999854 44
No 345
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=86.26 E-value=0.98 Score=41.16 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.+ |.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~-~r 45 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIA-DL 45 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE-eC
Confidence 478999999985 999999999999999999854 44
No 346
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=86.14 E-value=10 Score=37.50 Aligned_cols=299 Identities=13% Similarity=0.040 Sum_probs=150.0
Q ss_pred CCCHHHHHHH-HHHHHHHHhhc---CCCCCCceeEE--ecCCCCCCHHHHHHHHHHHHHHHhhccCCCCcccCCC----C
Q 015287 74 EVDPDEVNAL-AQLMTWKTAVA---AIPYGGAKGGI--GCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPD----M 143 (410)
Q Consensus 74 ~~~~~ev~~L-A~~Mt~K~Al~---~lp~GGaKggI--~~dP~~~s~~e~e~~~r~f~~~l~~~iG~~~dipapD----v 143 (410)
+.|.+|+..| .....+|.... ..|.--+|-.. .+.|.. |---+|-.++..+.|.-..+...+ -
T Consensus 10 dls~eei~~ll~~A~~lk~~~~~~~~~~~L~gK~la~lF~epST-------RTR~SFE~A~~~LGg~vi~l~~~~ssl~k 82 (355)
T 4a8p_A 10 TYTKEEMHYLVDLSLKIKEAIKNGYYPQLLKNKSLGMIFQQSST-------RTRVSFETAMEQLGGHGEYLAPGQIQLGG 82 (355)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHTTCCCCTTTTCEEEEEESSCCS-------HHHHHHHHHHHHTTCEEEEECBTTBCBTT
T ss_pred hCCHHHHHHHHHHHHHHHhhhhcCCcccccCCCEEEEEecCCCh-------hhHhhHHHHHHHcCCeEEEeCcccccCCC
Confidence 4566666543 22333444322 13443455543 335554 222367778887776554343222 3
Q ss_pred CCCHHHHHHHHHHhhhh---hCCCC------ceecCccccCCCCCCCCchhHHHHHHHHHHHHHHh--CCCCCCCeEEEE
Q 015287 144 GTNSQTMAWILDEYSKF---HGHSP------AVVTGKPIDLGGSLGREAATGLGVFFATEALLAEH--GKSISNMKFAIQ 212 (410)
Q Consensus 144 gt~~~~m~wi~d~~~~~---~g~~~------~~~tGkp~~~GGs~gr~~aTg~Gv~~~~~~~~~~~--g~~l~g~~vaIq 212 (410)
|-+-.|.+-+...|... +.... +-..+.|+..+|+.+.-+.-+.-=.++++ +++ |.+++|.+|++.
T Consensus 83 gEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~---E~~~~G~~l~glkva~v 159 (355)
T 4a8p_A 83 HETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMV---EHLPEGKKLEDCKVVFV 159 (355)
T ss_dssp TBCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHH---HTCCTTCCGGGCEEEEE
T ss_pred CcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH---HHhhcCCCCCCCEEEEE
Confidence 34456666555544221 11111 11256788888874333332333233333 345 546899999999
Q ss_pred cc-ChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHH-HHHHH----HHhCC-CcccCCCCeeecCCcccccccceE
Q 015287 213 GF-GNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVP-ALLKY----KKSNK-SLNDFQGGNAMDLNDLLVHECDVL 285 (410)
Q Consensus 213 Gf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~-~l~~~----~~~~g-~v~~~~~~~~i~~~~ll~~~~Dvl 285 (410)
|= +||....+..+...|++|+ ++- |.|+.++ .+.+. .++.| .+. ..++-+ --.++||+
T Consensus 160 GD~~rva~Sl~~~~~~~G~~v~-~~~-------P~~~~p~~~~~~~~~~~a~~~G~~v~------~~~d~~-av~~aDVV 224 (355)
T 4a8p_A 160 GDATQVCFSLGLITTKMGMNFV-HFG-------PEGFQLNEEHQAKLAKNCEVSGGSFL------VTDDAS-SVEGADFL 224 (355)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEE-EEC-------CTTSSCCHHHHHHHHHHHHHHSCEEE------EECCGG-GGTTCSEE
T ss_pred CCCchhHHHHHHHHHHcCCEEE-EEC-------CCccCCCHHHHHHHHHHHHHcCCeEE------EECCHH-HHcCCCEE
Confidence 94 8899999999999999987 333 5565443 33332 12222 221 111112 22478888
Q ss_pred eecccCCcc-cccc--cccccceEEEecCC-CCCCHHHHHHHHhCCceEeccccccccCceehhHHHhhhcccCCCCHHH
Q 015287 286 VPCALGGVL-NKEN--AADVKAKFIIEAAN-HPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEK 361 (410)
Q Consensus 286 iPaA~~~~I-~~~n--a~~i~akiIvEgAN-~p~t~~A~~iL~~rGI~v~PD~laNaGGVi~s~~E~~qn~~~~~w~~~~ 361 (410)
+.=. --.. .++. ..+++. -.+ -++|++--+.. +.+..++.-.=+|-|-=|.+ |+...-+...| ++
T Consensus 225 ytd~-w~smgq~~~~~~er~~~-----~~~~y~vt~ell~~a-k~dai~MHcLPa~Rg~EIt~--eV~d~p~S~if--~Q 293 (355)
T 4a8p_A 225 YTDV-WYGLYEAELSEEERMKV-----FYPKYQVNQEMMDRA-GANCKFMHCLPATRGEEVTD--EVIDGKNSICF--DE 293 (355)
T ss_dssp EECC-SSEETTEECCHHHHHHH-----HTTTTCBCHHHHHHH-CTTCEEEECSCCCBTTTBCH--HHHTSTTBCHH--HH
T ss_pred Eecc-cccCcchhhhhHHHHHH-----hccccccCHHHHHhc-CCCcEEECCCCCCCCCeeCH--HHhCCCcchHH--HH
Confidence 7411 0000 1111 111110 112 34677654433 45555553333555544432 33333333344 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHcCCC
Q 015287 362 VNHELKRYMMSAFKDIKTMCQTHNCNLRMGAFTLGVNRVAQATLLRGWE 410 (410)
Q Consensus 362 v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~A~~ri~~a~~~rg~~ 410 (410)
+..++--+| ..+..++....... ++....|.-|-+|+...+..++++
T Consensus 294 aeNrl~~r~-AlL~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 340 (355)
T 4a8p_A 294 AENRLTSIR-GLLVYLMNDYEAKN-PYDLIKQAEAKKELEVFLDTQSIS 340 (355)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HhcCHHHHH-HHHHHHHhhhhhcc-ChhHHHHHHHHHHHHHHHhcCCcc
Confidence 555554433 22333333222232 666788899999999998888764
No 347
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.12 E-value=1.4 Score=38.63 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=28.6
Q ss_pred CCCCeEEEEc-cChHHHHHHHHHHHCCCEEEEE
Q 015287 204 ISNMKFAIQG-FGNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 204 l~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaV 235 (410)
-.|++|.|.| .|.+|..+++++...|++|+++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~ 69 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTT 69 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEE
Confidence 4688999999 6999999999999999999854
No 348
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=86.12 E-value=0.89 Score=42.66 Aligned_cols=35 Identities=26% Similarity=0.351 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r 64 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVA-VAAR 64 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 589999999995 8999999999999999998 4554
No 349
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=86.10 E-value=1.1 Score=40.92 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=30.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEE
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 235 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+.+
T Consensus 3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~ 37 (264)
T 2pd6_A 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAAC 37 (264)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 3578999999985 999999999999999999854
No 350
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=86.08 E-value=0.81 Score=41.32 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+.+ +.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~-~r 39 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIIT-GT 39 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-eC
Confidence 4578999999985 999999999999999999854 44
No 351
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=86.04 E-value=1 Score=41.81 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=31.4
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+.+|+.|.++|++|+ +.|.
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~r 40 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVA-FCAR 40 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEeC
Confidence 4688999999995 8999999999999999988 5555
No 352
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=86.00 E-value=1 Score=41.95 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.2
Q ss_pred CCCCCeEEEEcc-----------------ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 203 SISNMKFAIQGF-----------------GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 203 ~l~g~~vaIqGf-----------------GnVG~~~a~~L~~~GakvVaVsD 237 (410)
+++|++|.|.|. |.+|..+|+.|.++|++|+-++.
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 488999999998 79999999999999999986644
No 353
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.99 E-value=0.89 Score=40.27 Aligned_cols=30 Identities=37% Similarity=0.441 Sum_probs=27.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
++|.|.|. |.+|+++++.|.++|.+|++++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~ 31 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVV 31 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 47999997 9999999999999999999664
No 354
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=85.96 E-value=0.99 Score=41.54 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r 37 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVV-LADV 37 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 478999999995 9999999999999999998 4454
No 355
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=85.96 E-value=0.63 Score=42.76 Aligned_cols=39 Identities=23% Similarity=0.287 Sum_probs=31.4
Q ss_pred HhCCCCCCCeEEEEccChHHHHHHHHH--HHCCCEEEEEECCC
Q 015287 199 EHGKSISNMKFAIQGFGNVGSWAAKFF--HEHGGKVVAVSDIT 239 (410)
Q Consensus 199 ~~g~~l~g~~vaIqGfGnVG~~~a~~L--~~~GakvVaVsD~~ 239 (410)
.+|.+ +..+|+|.|.|++|+.+++.+ .. |.++||+.|.+
T Consensus 74 ~lg~~-~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~d 114 (211)
T 2dt5_A 74 ILGLN-RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVD 114 (211)
T ss_dssp HHTTT-SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESC
T ss_pred HhCcC-CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCC
Confidence 45654 347899999999999999863 34 89999999975
No 356
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.92 E-value=0.96 Score=41.88 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
..++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 43 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLV-LAAR 43 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEE-EEeC
Confidence 3588999999995 8899999999999999998 4554
No 357
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=85.89 E-value=0.98 Score=41.61 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 44 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAI-ADL 44 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999995 89999999999999999984 454
No 358
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=85.86 E-value=1.7 Score=42.69 Aligned_cols=31 Identities=23% Similarity=0.439 Sum_probs=27.1
Q ss_pred CeEEEEc-cChHHHHHHHHHHHCC-CEEEEEEC
Q 015287 207 MKFAIQG-FGNVGSWAAKFFHEHG-GKVVAVSD 237 (410)
Q Consensus 207 ~~vaIqG-fGnVG~~~a~~L~~~G-akvVaVsD 237 (410)
+||+|.| +|.+|+.+++.|.++. .+|+++.+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~ 41 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAA 41 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 5899999 9999999999998764 68999975
No 359
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=85.83 E-value=1.1 Score=40.56 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=29.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEE
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 235 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~ 37 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAV 37 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 578999999996 999999999999999999854
No 360
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=85.82 E-value=1.1 Score=41.30 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~r 51 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVT-ICAR 51 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 3589999999995 8999999999999999998 4454
No 361
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=85.78 E-value=1 Score=41.57 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+.+++.|.++|++|+ +.|.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r 39 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIA-LLDM 39 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3578999999995 8999999999999999998 4454
No 362
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=85.75 E-value=0.99 Score=42.35 Aligned_cols=36 Identities=25% Similarity=0.451 Sum_probs=31.5
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r 59 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVV-VADV 59 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 4688999999995 8999999999999999998 5554
No 363
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=85.73 E-value=0.76 Score=41.71 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.++|+++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~-~~~r 46 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVV-LLGR 46 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEec
Confidence 478999999995 9999999999999999998 4555
No 364
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.70 E-value=0.78 Score=40.83 Aligned_cols=93 Identities=20% Similarity=0.222 Sum_probs=53.5
Q ss_pred CeEEEEc-cChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCC-CcccCCCCeeecCCcccccccce
Q 015287 207 MKFAIQG-FGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNK-SLNDFQGGNAMDLNDLLVHECDV 284 (410)
Q Consensus 207 ~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g-~v~~~~~~~~i~~~~ll~~~~Dv 284 (410)
++|+|.| .|++|+.+++.|.+.|.+|+ +.|.+ .+.+.+..++.+ .+.. ......+.++.+ .+||+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~-~~~r~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~D~ 67 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIV-VGSRR----------EEKAEAKAAEYRRIAGD-ASITGMKNEDAA-EACDI 67 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEE-EEESS----------HHHHHHHHHHHHHHHSS-CCEEEEEHHHHH-HHCSE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEE-EEeCC----------HHHHHHHHHHhcccccc-CCCChhhHHHHH-hcCCE
Confidence 4799999 99999999999999999987 45653 223322222111 0100 000111112223 37999
Q ss_pred EeecccCCccccccccc----ccceEEEecCCC
Q 015287 285 LVPCALGGVLNKENAAD----VKAKFIIEAANH 313 (410)
Q Consensus 285 liPaA~~~~I~~~na~~----i~akiIvEgAN~ 313 (410)
+|-|.-...+ .+.+.. ++-++|+..+|+
T Consensus 68 Vi~~~~~~~~-~~~~~~l~~~~~~~~vi~~~~g 99 (212)
T 1jay_A 68 AVLTIPWEHA-IDTARDLKNILREKIVVSPLVP 99 (212)
T ss_dssp EEECSCHHHH-HHHHHHTHHHHTTSEEEECCCC
T ss_pred EEEeCChhhH-HHHHHHHHHHcCCCEEEEcCCC
Confidence 9998754432 222222 234688888884
No 365
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=85.69 E-value=0.76 Score=42.67 Aligned_cols=36 Identities=14% Similarity=0.332 Sum_probs=31.0
Q ss_pred CCCCCeEEEEc---cChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQG---FGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqG---fGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++++.|.| .|.+|+.+++.|.++|++|+ +.|.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~-~~~r~ 42 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLV-LTGFD 42 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEE-EEECS
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEE-EEecC
Confidence 47899999999 58999999999999999998 45543
No 366
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.68 E-value=0.95 Score=39.82 Aligned_cols=31 Identities=32% Similarity=0.417 Sum_probs=27.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
++|.|.|. |.+|+++++.|.++|.+|++++-
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEc
Confidence 47999994 99999999999999999996643
No 367
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=85.67 E-value=0.44 Score=48.11 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=33.1
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCC
Q 015287 203 SISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITG 240 (410)
Q Consensus 203 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G 240 (410)
++++++|.|.|.|..|..+|++|+++|++|+ ++|++.
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~-~~D~~~ 38 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPR-VMDTRM 38 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCE-EEESSS
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEE-EEECCC
Confidence 3678999999999999999999999999998 788754
No 368
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=85.64 E-value=1.1 Score=41.18 Aligned_cols=36 Identities=17% Similarity=0.292 Sum_probs=30.8
Q ss_pred CCCCCCeEEEEcc-Ch--HHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GN--VGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-Gn--VG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|+++.|.|. |. +|+.+|+.|.++|++|+. .+.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~-~~r 41 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIF-TYA 41 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEE-EES
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEE-ecC
Confidence 4688999999996 56 999999999999999984 444
No 369
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=85.62 E-value=1.6 Score=39.77 Aligned_cols=30 Identities=17% Similarity=0.062 Sum_probs=25.5
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHCCCEEEEE
Q 015287 206 NMKFAIQGF-GNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 206 g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 235 (410)
|+++.|.|. |.+|+++++.|.++|++|+.+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEe
Confidence 468888884 899999999999999999843
No 370
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.62 E-value=0.66 Score=44.19 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=27.4
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
+.++++|.|.|. |.+|+++++.|.++|++|+++.-
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r 51 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDL 51 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeC
Confidence 478899999997 99999999999999999997643
No 371
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=85.57 E-value=1.1 Score=41.13 Aligned_cols=36 Identities=33% Similarity=0.361 Sum_probs=31.2
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~-~~~r 41 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVV-IVDR 41 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEcC
Confidence 4578999999995 8899999999999999988 4554
No 372
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=85.56 E-value=1 Score=41.86 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=31.8
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.+
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r~ 46 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADII-AVDLC 46 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEECC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEE-EEecc
Confidence 4589999999995 8999999999999999998 55543
No 373
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=85.51 E-value=0.79 Score=44.50 Aligned_cols=89 Identities=17% Similarity=0.120 Sum_probs=54.7
Q ss_pred CCeEEEEccChHHHHHHHHHHH--CCCEEEEEECCCCceeCCCCCCHHH-HHHHHHhCCCcccCCCCeeecCCcccc---
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHE--HGGKVVAVSDITGAIKNPNGIDVPA-LLKYKKSNKSLNDFQGGNAMDLNDLLV--- 279 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~--~GakvVaVsD~~G~i~~~~GlDi~~-l~~~~~~~g~v~~~~~~~~i~~~~ll~--- 279 (410)
..+|+|.|+|++|+.+++.|.+ .+.++++|+|.+- + . ..+..++.+.- . ...+.+++++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~-----~-----~~~~~~a~~~g~~-~----~~~~~e~ll~~~~ 68 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDA-----A-----SDGLARAQRMGVT-T----TYAGVEGLIKLPE 68 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCT-----T-----CHHHHHHHHTTCC-E----ESSHHHHHHHSGG
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCCh-----h-----hhHHHHHHHcCCC-c----ccCCHHHHHhccC
Confidence 3689999999999999999955 5789999999752 1 1 12222222210 0 0112245554
Q ss_pred -cccceEeecccCCcccccccccc-----cceEEEec
Q 015287 280 -HECDVLVPCALGGVLNKENAADV-----KAKFIIEA 310 (410)
Q Consensus 280 -~~~DvliPaA~~~~I~~~na~~i-----~akiIvEg 310 (410)
.++|+.+.|+- +..+.+.+... +..+|+|-
T Consensus 69 ~~~iDvV~~atp-~~~h~~~a~~al~a~~Gk~Vi~ek 104 (312)
T 1nvm_B 69 FADIDFVFDATS-ASAHVQNEALLRQAKPGIRLIDLT 104 (312)
T ss_dssp GGGEEEEEECSC-HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCCcEEEECCC-hHHHHHHHHHHHHhCCCCEEEEcC
Confidence 36899999864 55555555442 44566654
No 374
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.50 E-value=0.95 Score=42.85 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=31.6
Q ss_pred CCCCCCeEEEEccC---hHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGFG---NVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGfG---nVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+++|+++.|.|.+ .+|+.+|+.|.++|++|+ +.|.+
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~-~~~r~ 65 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVA-LTYLS 65 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEE-EEESS
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEE-EEeCC
Confidence 35889999999975 899999999999999988 55654
No 375
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.50 E-value=0.81 Score=42.48 Aligned_cols=37 Identities=14% Similarity=0.218 Sum_probs=31.9
Q ss_pred CCCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 201 GKSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 201 g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
..+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~r 42 (267)
T 3t4x_A 5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVL-INGR 42 (267)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 35688999999995 8999999999999999998 5555
No 376
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=85.66 E-value=0.16 Score=46.03 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=30.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+.+++|.|+|+|++|+.+++.|.+.|.+|+ +.|.+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~-~~~r~ 51 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVV-FGSRN 51 (201)
Confidence 677899999999999999999999998876 55653
No 377
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=85.39 E-value=0.76 Score=42.41 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVV-ITGR 38 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 478999999995 8999999999999999988 5555
No 378
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=85.37 E-value=0.36 Score=45.22 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=28.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEE
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaV 235 (410)
..-++|+|+|.|++|..+++.|.+.|.+|+++
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~ 35 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVL 35 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEEC
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEe
Confidence 34479999999999999999999999999854
No 379
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.35 E-value=0.75 Score=42.95 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=28.5
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
+.+++|.|.|. |.+|+++++.|.++|.+|++++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 38 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLD 38 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 56789999997 9999999999999999999654
No 380
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.25 E-value=2.7 Score=40.27 Aligned_cols=32 Identities=38% Similarity=0.416 Sum_probs=27.5
Q ss_pred CeEEEEccChHHHHHHHHHHHCCC--EEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGG--KVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~ 239 (410)
++|+|.|.|.||+.++..|...|. .|+ +.|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~-L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELV-LVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeCC
Confidence 489999999999999999999987 776 66663
No 381
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=85.25 E-value=0.91 Score=41.70 Aligned_cols=36 Identities=14% Similarity=0.301 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++++.|.|. |.+|+++++.|.++|++|+ +.|.+
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIV-LNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEE-EECSS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 367899999995 9999999999999999998 45553
No 382
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=85.21 E-value=3.8 Score=38.62 Aligned_cols=33 Identities=30% Similarity=0.375 Sum_probs=28.5
Q ss_pred CCCeEEEEc-cChHHHHHHHHHHHCCCEEEEEECC
Q 015287 205 SNMKFAIQG-FGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 205 ~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|.|.| .|-+|+++++.|.++|++|+++ |.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~-~r 37 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIA-DN 37 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEE-ec
Confidence 467999999 4999999999999999999854 44
No 383
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=85.18 E-value=0.77 Score=42.76 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi-~~~r 62 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVV-IADL 62 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEeC
Confidence 478999999995 8999999999999999998 5555
No 384
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=85.17 E-value=0.68 Score=48.03 Aligned_cols=55 Identities=27% Similarity=0.340 Sum_probs=35.9
Q ss_pred hhHHHHHHHHHHHHHHhC---------CCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 184 ATGLGVFFATEALLAEHG---------KSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 184 aTg~Gv~~~~~~~~~~~g---------~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-.+.|...+++.+++..+ .+++++++.|.|.|.+|+.+++.|.+.|++|+ |++.+
T Consensus 333 TD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~-i~~R~ 396 (523)
T 2o7s_A 333 TDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVV-IANRT 396 (523)
T ss_dssp CHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC-CE-EEESS
T ss_pred CCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEECC
Confidence 344577777776543211 35789999999999999999999999999876 66664
No 385
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=85.16 E-value=0.87 Score=42.50 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=29.2
Q ss_pred CCCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 201 GKSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 201 g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+.++.++++.|.|. |.+|+++|+.|.++|++|+. .|.
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 48 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLL-LAR 48 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEE-EES
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EEC
Confidence 45678899999995 89999999999999999984 444
No 386
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=85.12 E-value=0.88 Score=41.81 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~-~~~r 41 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVI-GTAT 41 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 578999999985 8999999999999999998 4454
No 387
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=85.09 E-value=1.9 Score=41.89 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=29.2
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
.|.+|.|+|.|.||..+++++...|++|++++
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~ 210 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVIS 210 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 58899999999999999999999999988654
No 388
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=85.05 E-value=2.6 Score=41.19 Aligned_cols=34 Identities=29% Similarity=0.270 Sum_probs=28.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCC--EEEEEECC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGG--KVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~ 238 (410)
-.+++|+|.|.|+||+.+|..|...|. .++ +.|.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~-l~D~ 42 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIG-IVDI 42 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEeC
Confidence 356899999999999999999988776 555 6676
No 389
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.04 E-value=0.82 Score=42.38 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 42 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVA-VAGR 42 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 588999999985 8999999999999999998 4555
No 390
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=85.02 E-value=0.9 Score=41.84 Aligned_cols=36 Identities=19% Similarity=0.105 Sum_probs=30.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+.+|+.|.++|++|+ +.|.
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~r 39 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVV-LIAR 39 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEE-EEES
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEEC
Confidence 3578999999995 8999999999999999998 4454
No 391
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=85.01 E-value=1.3 Score=40.71 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 39 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLL-FSR 39 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeC
Confidence 578999999995 89999999999999999984 454
No 392
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=85.00 E-value=1.5 Score=41.73 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=30.3
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
-.|.+|.|+|.|.||..+++++...|++|++++
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~ 173 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS 173 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE
Confidence 468999999999999999999999999999775
No 393
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=85.00 E-value=0.68 Score=44.66 Aligned_cols=103 Identities=15% Similarity=0.041 Sum_probs=59.3
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc----ccc
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL----VHE 281 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll----~~~ 281 (410)
..+++|.|+|.+|+.+++.|.+.|. |+ +.|.+ .+.+. ..+. + +.-+.+ .. +..+.| -.+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~-vid~~----------~~~~~-~~~~-~-~~~i~g-d~-~~~~~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FV-LAEDE----------NVRKK-VLRS-G-ANFVHG-DP-TRVSDLEKANVRG 177 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EE-EESCG----------GGHHH-HHHT-T-CEEEES-CT-TSHHHHHHTCSTT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EE-EEeCC----------hhhhh-HHhC-C-cEEEEe-CC-CCHHHHHhcChhh
Confidence 4589999999999999999999998 77 55763 23333 2221 1 110100 11 112222 236
Q ss_pred cceEeecccCCc---ccccccccc--cceEEEecCCCCCCHHHHHHHHhCCce
Q 015287 282 CDVLVPCALGGV---LNKENAADV--KAKFIIEAANHPTDPEADEILSKKGVV 329 (410)
Q Consensus 282 ~DvliPaA~~~~---I~~~na~~i--~akiIvEgAN~p~t~~A~~iL~~rGI~ 329 (410)
+|.++-+.-.+. .....++++ +.++|+..-| ++..+.|++.|+-
T Consensus 178 a~~vi~~~~~d~~n~~~~~~ar~~~~~~~iiar~~~----~~~~~~l~~~G~d 226 (336)
T 1lnq_A 178 ARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER----YENIEQLRMAGAD 226 (336)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHTTCTTSEEEEECSS----GGGHHHHHHTTCS
T ss_pred ccEEEEcCCccHHHHHHHHHHHHHCCCCeEEEEECC----HHHHHHHHHcCCC
Confidence 888887754322 222334444 4578887643 4455778888874
No 394
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=84.96 E-value=1.1 Score=42.11 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=31.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++||++.|.|. +.+|+.+|+.|.++|++|+ ++|.+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv-~~~~~ 44 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVV-ALGLD 44 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 58999999996 7899999999999999998 67763
No 395
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.94 E-value=1.1 Score=43.11 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++++++|.|.|. |.+|+++++.|.++|++|+ +++.
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv-~~~r 40 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVA-IADI 40 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEE-EEEC
Confidence 478999999995 8999999999999999998 5555
No 396
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=84.93 E-value=1 Score=42.14 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=30.7
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.++|+++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~r 59 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTV-IASR 59 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEE-EEES
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEeC
Confidence 378999999995 7899999999999999998 4554
No 397
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.86 E-value=0.75 Score=44.94 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=28.6
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
|.+|.|+|.|.||..+++++...|++|+++.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~ 211 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMAN 211 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 8999999999999999999999999998553
No 398
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.83 E-value=1 Score=40.99 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=29.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.+.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTA 36 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 478899999985 8999999999999999998543
No 399
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=84.82 E-value=1.3 Score=40.54 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+.+ |.
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~-~r 44 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLL-DL 44 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-eC
Confidence 3578999999995 999999999999999999854 44
No 400
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=84.80 E-value=0.83 Score=42.76 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=31.6
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~-~~~r 58 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARIL-INGT 58 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-ECCS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3689999999995 8999999999999999998 5565
No 401
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=84.79 E-value=1.3 Score=40.51 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 39 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAI-ADL 39 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EcC
Confidence 478999999995 89999999999999999984 454
No 402
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=84.79 E-value=1.2 Score=41.76 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=30.2
Q ss_pred CCCCCCeEEEEcc---ChHHHHHHHHHHHCCCEEEEE
Q 015287 202 KSISNMKFAIQGF---GNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 202 ~~l~g~~vaIqGf---GnVG~~~a~~L~~~GakvVaV 235 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+.+
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~ 40 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVG 40 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEe
Confidence 4578999999997 689999999999999999854
No 403
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=84.77 E-value=1.2 Score=42.07 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=31.8
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+++|+++.|.|. |.+|+.+|+.|.+.|++|+ +.|.+
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~~~ 61 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADII-AIDVC 61 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEECC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEecc
Confidence 4589999999995 8899999999999999998 45543
No 404
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=84.75 E-value=2.2 Score=40.94 Aligned_cols=36 Identities=31% Similarity=0.371 Sum_probs=31.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
..|.+|.|+|.|.||..++.++...|++++.++|.+
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~ 194 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDIS 194 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEech
Confidence 578999999999999999999999999876667764
No 405
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=84.73 E-value=0.82 Score=45.02 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=28.7
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~-~~dr~ 40 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVF-GYNRS 40 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEE-EECSC
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 4689999999999999999999999887 55653
No 406
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=84.73 E-value=1.3 Score=41.49 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+.+++.|.++|++|+ +.|.
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~-~~~r 61 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVF-ICAR 61 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEeC
Confidence 478999999995 8999999999999999988 5555
No 407
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=84.73 E-value=1.4 Score=40.79 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 39 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVF-GDI 39 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999995 99999999999999999984 454
No 408
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.72 E-value=0.89 Score=42.00 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~-~~~r 61 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVV-LTAR 61 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEEC
Confidence 478999999985 9999999999999999988 4555
No 409
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=84.68 E-value=0.95 Score=41.58 Aligned_cols=35 Identities=29% Similarity=0.339 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~r 38 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVA-FSDI 38 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 478999999985 8999999999999999988 5555
No 410
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=84.65 E-value=0.94 Score=44.49 Aligned_cols=32 Identities=25% Similarity=0.212 Sum_probs=27.8
Q ss_pred CeEEEEccChHHHHHHHHHHHCC-------CEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHG-------GKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~G-------akvVaVsD~~ 239 (410)
++|+|.|.|++|+.+|..|.+.| ..|+ +.|.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~-~~~r~ 60 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVR-MWIRD 60 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEE-EECCS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEE-EEECC
Confidence 48999999999999999999888 7876 66664
No 411
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=84.63 E-value=1.3 Score=41.23 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=31.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 41 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVI-CDK 41 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 4578999999995 89999999999999999984 454
No 412
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=84.57 E-value=0.88 Score=42.27 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 52 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLV-LSGR 52 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 578999999995 8999999999999999988 5555
No 413
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=84.56 E-value=0.86 Score=42.51 Aligned_cols=36 Identities=19% Similarity=0.342 Sum_probs=30.9
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.+
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~-~~~r~ 61 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVA-VADRA 61 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-ECSSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 488999999985 8899999999999999998 56653
No 414
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=84.55 E-value=0.85 Score=42.11 Aligned_cols=36 Identities=25% Similarity=0.394 Sum_probs=31.4
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|+++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r 44 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVV-VTDL 44 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEE-EEES
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 4589999999995 8999999999999999988 5555
No 415
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.51 E-value=1.2 Score=42.34 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=30.9
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ ++|.
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~-~~~r 63 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLV-LSDV 63 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 488999999995 8999999999999999998 5555
No 416
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.47 E-value=1.2 Score=42.14 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=31.1
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~-~~~~ 81 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVA-INYL 81 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EECC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 488999999995 8999999999999999998 5554
No 417
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=84.46 E-value=1.4 Score=41.01 Aligned_cols=36 Identities=19% Similarity=0.109 Sum_probs=31.3
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+. .+.
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~-~~r 53 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVV-ASR 53 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 4589999999995 89999999999999999984 454
No 418
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=84.45 E-value=1.3 Score=40.70 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r 41 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYT-CSR 41 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999995 89999999999999999984 454
No 419
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=84.45 E-value=1.8 Score=41.73 Aligned_cols=31 Identities=10% Similarity=0.325 Sum_probs=28.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHC--CCEEEEE
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEH--GGKVVAV 235 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~--GakvVaV 235 (410)
.|.+|.|+|.|.||..+++++... |++|+++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~ 202 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGI 202 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 889999999999999999999988 9998854
No 420
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=84.43 E-value=1.2 Score=36.98 Aligned_cols=35 Identities=23% Similarity=0.217 Sum_probs=30.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHC-CCEEEEEECCC
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVSDIT 239 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~ 239 (410)
+.++++|.|.|..|..+++.|.+. |.+++|+.|.+
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~ 38 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDD 38 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECC
Confidence 357899999999999999999765 89999999864
No 421
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.40 E-value=0.9 Score=43.18 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=31.9
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+++|+++.|.|. |.+|+.+|+.|.++|++|+ +.|.+
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~-~~~r~ 74 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVA-VAARS 74 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEESS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEECC
Confidence 4689999999985 8999999999999999998 55553
No 422
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=84.34 E-value=0.98 Score=41.08 Aligned_cols=36 Identities=28% Similarity=0.456 Sum_probs=31.3
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.++++++|.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~r 46 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVI-ISGS 46 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEcC
Confidence 4588999999995 8999999999999999998 4454
No 423
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=84.30 E-value=1.4 Score=40.42 Aligned_cols=36 Identities=28% Similarity=0.325 Sum_probs=30.9
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++++.|.|. |.+|+.+++.|.++|++|+.+ |.+
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~-~r~ 40 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGF-DQA 40 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCc
Confidence 478899999995 999999999999999999854 443
No 424
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=84.29 E-value=1.3 Score=40.70 Aligned_cols=35 Identities=37% Similarity=0.516 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.+ |.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~-~r 48 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA-DI 48 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-cC
Confidence 478999999985 999999999999999999854 44
No 425
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=84.25 E-value=1.4 Score=41.31 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~-~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIV-LNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3588999999995 8999999999999999998 5554
No 426
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=84.23 E-value=1.6 Score=40.78 Aligned_cols=36 Identities=19% Similarity=0.134 Sum_probs=31.3
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
.+++|+++.|.|. |.+|+.+|+.|.++|++|+.+..
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999995 88999999999999999985433
No 427
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=84.23 E-value=0.84 Score=42.92 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~-~~~r 61 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVL-CADI 61 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 588999999985 8999999999999999998 5554
No 428
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=84.20 E-value=2.9 Score=40.99 Aligned_cols=55 Identities=22% Similarity=0.176 Sum_probs=40.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCC---------ceeCCCCCCHHHHHHHHHh
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITG---------AIKNPNGIDVPALLKYKKS 259 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G---------~i~~~~GlDi~~l~~~~~~ 259 (410)
+.|++|.|.|.|..|+.+++.+.+.|.+|+.+ |.+. ..+..+-.|.+.+.+..++
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~-d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~ 75 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVL-DPTKNSPCAQVADIEIVASYDDLKAIQHLAEI 75 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEE-ESSTTCTTTTTCSEEEECCTTCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEE-eCCCCCchHHhCCceEecCcCCHHHHHHHHHh
Confidence 68999999999999999999999999999965 5431 1233344566666655543
No 429
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=84.19 E-value=0.77 Score=45.40 Aligned_cols=36 Identities=22% Similarity=0.400 Sum_probs=32.6
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++|.|.|.|.+|+.+++.|...|..=+.+.|.+
T Consensus 32 L~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 32 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 678999999999999999999999998766788865
No 430
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=84.18 E-value=1.3 Score=41.39 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~-~~r 58 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVI-ASR 58 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999995 99999999999999999985 444
No 431
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.07 E-value=2.6 Score=41.24 Aligned_cols=32 Identities=31% Similarity=0.547 Sum_probs=29.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
.|.+|.|.|.|.||..+++++...|++|+++.
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~ 225 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT 225 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 58899999999999999999999999988654
No 432
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=84.00 E-value=1.1 Score=40.94 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=30.0
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.++
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 45 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIY 45 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence 478899999985 9999999999999999998553
No 433
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=83.94 E-value=0.72 Score=45.27 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=29.4
Q ss_pred CeEEEEccChHHHHHHHHHHH-CCCEEEEEECCC
Q 015287 207 MKFAIQGFGNVGSWAAKFFHE-HGGKVVAVSDIT 239 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~ 239 (410)
.||+|.|+|.+|+.+++.|.+ .+.++++|.|.+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~ 35 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTR 35 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESS
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 489999999999999999987 578999999864
No 434
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=83.90 E-value=2.1 Score=41.13 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=29.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
-.|.+|.|.|.|.||..+++++...|++|+++.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~ 197 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVD 197 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 468899999999999999999999999999653
No 435
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=83.90 E-value=1.2 Score=42.10 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=30.7
Q ss_pred CCCCCeEEEEcc-Ch--HHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GN--VGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-Gn--VG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++|+++.|.|. |. +|+.+|+.|.++|++|+ +.+.+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~-~~~r~ 66 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELA-FTYQG 66 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEE-EEECS
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEE-EEcCC
Confidence 489999999997 55 99999999999999988 55543
No 436
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.88 E-value=0.89 Score=43.33 Aligned_cols=108 Identities=13% Similarity=0.113 Sum_probs=60.1
Q ss_pred CeEEEEccChHHHHHHHHHHHCCCEEEEEECC--CCceeCCCCCCHHHHHHHHHhCCCcc-c--CCCCeeecCCccc--c
Q 015287 207 MKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI--TGAIKNPNGIDVPALLKYKKSNKSLN-D--FQGGNAMDLNDLL--V 279 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~--~G~i~~~~GlDi~~l~~~~~~~g~v~-~--~~~~~~i~~~~ll--~ 279 (410)
++|+|.|.|++|+.+|..|.+.|..|+ +.|. + .+.+....+....+. + ++.....+++++- -
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~-~~~r~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVR-IWGTEFD----------TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL 69 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEE-EECCGGG----------HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEE-EEEccCC----------HHHHHHHHHhCcCcccCccccceEEecHHhHHHHH
Confidence 479999999999999999999999887 5555 3 223333332211111 0 0000112111221 2
Q ss_pred cccceEeecccCCcccc---ccccccc-ceEEEecCCCC------CCHHHHHHHHhC
Q 015287 280 HECDVLVPCALGGVLNK---ENAADVK-AKFIIEAANHP------TDPEADEILSKK 326 (410)
Q Consensus 280 ~~~DvliPaA~~~~I~~---~na~~i~-akiIvEgAN~p------~t~~A~~iL~~r 326 (410)
.+||++|-|.-...+.+ +-++ ++ -++|+.-.|+- ......+.+.+.
T Consensus 70 ~~~D~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~ 125 (335)
T 1txg_A 70 ENAEVVLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLK 125 (335)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTS
T ss_pred hcCCEEEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHh
Confidence 37999998875443221 1223 43 35788888874 234455666653
No 437
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=83.80 E-value=1.8 Score=42.01 Aligned_cols=36 Identities=11% Similarity=0.019 Sum_probs=32.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-.|.+|.|+|. |.||..+++++...|+++|++++++
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~ 202 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 202 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence 36889999997 9999999999999999999888764
No 438
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=83.79 E-value=2.1 Score=41.25 Aligned_cols=33 Identities=36% Similarity=0.469 Sum_probs=29.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 205 SNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 205 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.|.+|.|+|.|.+|..+++++...|++|++ +|.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~-~~~ 196 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVA-VDI 196 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEE-EeC
Confidence 578999999999999999999999999985 443
No 439
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=83.78 E-value=1.1 Score=41.26 Aligned_cols=35 Identities=26% Similarity=0.252 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcc---ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF---GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf---GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~-~~r 42 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVAL-SYQ 42 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEE-EES
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEE-EcC
Confidence 478999999996 69999999999999999984 454
No 440
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=83.77 E-value=1.5 Score=40.56 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+.+++.|.++|++|+. .|.
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 45 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSL-VDV 45 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999985 99999999999999999984 454
No 441
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=83.75 E-value=1.1 Score=40.65 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .+.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~-~~r 38 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMI-TGR 38 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeC
Confidence 478899999985 99999999999999999984 444
No 442
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=83.70 E-value=1.1 Score=41.86 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcc-Ch--HHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GN--VGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-Gn--VG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++++++.|.|. |+ +|+.+|+.|.++|++|+ +.|.+
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~-~~~r~ 61 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELA-FTYVG 61 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEE-EEECT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEE-EeeCc
Confidence 478999999995 56 99999999999999988 55553
No 443
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=83.67 E-value=0.99 Score=40.92 Aligned_cols=35 Identities=31% Similarity=0.368 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~-~~r 43 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVV-SDI 43 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEE-EES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEE-EcC
Confidence 478999999985 99999999999999999984 444
No 444
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=83.67 E-value=1.2 Score=41.38 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcc---ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF---GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf---GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~-~~r 40 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAF-TYL 40 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEE-EES
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence 378899999996 69999999999999999984 454
No 445
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=83.65 E-value=1 Score=42.42 Aligned_cols=36 Identities=28% Similarity=0.392 Sum_probs=31.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
+++|+++.|.|. |.+|+.+|+.|.++|++|+ +.|.+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~-~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVV-VTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-ECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEECC
Confidence 478999999985 8999999999999999988 56653
No 446
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=83.64 E-value=1.6 Score=40.55 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=31.2
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r 63 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVL-WDI 63 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EEc
Confidence 4588999999994 99999999999999999984 444
No 447
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=83.63 E-value=0.84 Score=42.96 Aligned_cols=36 Identities=22% Similarity=0.134 Sum_probs=27.7
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r 65 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVV-ITGR 65 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 4589999999995 8999999999999999998 5555
No 448
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=83.63 E-value=1.5 Score=40.31 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 38 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVAL-CDL 38 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 378899999995 89999999999999999984 454
No 449
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.56 E-value=1.3 Score=40.48 Aligned_cols=36 Identities=17% Similarity=0.212 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCE-EEEEECCC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGK-VVAVSDIT 239 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~Gak-vVaVsD~~ 239 (410)
+++++++.|.|. |.+|+++++.|.++|++ |+ +.|.+
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~-~~~r~ 39 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFV-ILDRV 39 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEE-EEESS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEE-EEecC
Confidence 478899999985 89999999999999997 66 55553
No 450
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=83.48 E-value=0.92 Score=43.23 Aligned_cols=33 Identities=24% Similarity=0.481 Sum_probs=28.8
Q ss_pred CCeEEEEc-cChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 206 NMKFAIQG-FGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 206 g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.++|+|+| .|++|+.+++.|.+.|.+|+ +.|.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~-~~~~~ 54 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPIS-ILDRE 54 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEE-EECTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEE-EEECC
Confidence 46899999 99999999999999999887 56754
No 451
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=83.47 E-value=1.2 Score=41.55 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=31.4
Q ss_pred CCCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 201 GKSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 201 g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
..+++|++|.|.|. |.+|+++|+.|.++|++|+. .|.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~-~~r 46 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVS-VSL 46 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 34689999999996 88999999999999999985 444
No 452
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=83.42 E-value=1.3 Score=40.35 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=28.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 205 SNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 205 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.++++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~-~~~r 35 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVS-MMGR 35 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 5788999995 8999999999999999998 4554
No 453
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=83.40 E-value=1.1 Score=41.05 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+.+..
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3478999999985 99999999999999999986543
No 454
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=83.32 E-value=1.5 Score=42.06 Aligned_cols=36 Identities=36% Similarity=0.415 Sum_probs=31.3
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHH--CCCEEEEEEC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHE--HGGKVVAVSD 237 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~--~GakvVaVsD 237 (410)
.++++++|.|.|. |-+|+++++.|.+ .|++|+++.-
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 4578999999975 9999999999999 9999996653
No 455
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=83.30 E-value=1.1 Score=41.21 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=30.1
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r 37 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVY-ITGR 37 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEeC
Confidence 468899999985 8999999999999999998 4454
No 456
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=83.30 E-value=10 Score=37.66 Aligned_cols=32 Identities=34% Similarity=0.489 Sum_probs=26.3
Q ss_pred CeEEEEccChHHHHHHHHH----HHC-CCEEEEEECC
Q 015287 207 MKFAIQGFGNVGSWAAKFF----HEH-GGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqGfGnVG~~~a~~L----~~~-GakvVaVsD~ 238 (410)
.||+|-|||.+|+.+.|.| .+. ...||||-|.
T Consensus 3 ~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~ 39 (359)
T 3ids_C 3 IKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDM 39 (359)
T ss_dssp EEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECS
T ss_pred eEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecC
Confidence 4899999999999999984 332 4789999984
No 457
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=83.28 E-value=1.6 Score=39.98 Aligned_cols=35 Identities=17% Similarity=0.287 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+.+++.|.++|++|+ +.|.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~r 39 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVA-IAAR 39 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 478899999995 8999999999999999998 4454
No 458
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=83.24 E-value=1.6 Score=39.92 Aligned_cols=35 Identities=26% Similarity=0.494 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+.+++.|.++|++|+. .|.
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r 37 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVA-CDI 37 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 467899999995 99999999999999999984 444
No 459
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=83.23 E-value=1.1 Score=43.35 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=30.9
Q ss_pred CCCCeEEEEccChHHH-HHHHHHHH-CCCEEEEEECCCC
Q 015287 204 ISNMKFAIQGFGNVGS-WAAKFFHE-HGGKVVAVSDITG 240 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~-~~a~~L~~-~GakvVaVsD~~G 240 (410)
++-.||+|+|+|++|+ ..++.|.+ .+.+|+||+|.+.
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~ 61 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHG 61 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSC
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCCh
Confidence 5668999999999998 57777766 4799999999863
No 460
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.17 E-value=1.5 Score=40.78 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=31.4
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~-~~~r 47 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADII-ACDI 47 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEEC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEec
Confidence 3589999999995 8999999999999999998 4554
No 461
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.10 E-value=1.1 Score=40.43 Aligned_cols=34 Identities=32% Similarity=0.541 Sum_probs=28.7
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++++++.|.|. |.+|+++++.|.++|++|+.+ |.
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~-~r 35 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNI-DL 35 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEE-ES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-ec
Confidence 36789999985 899999999999999999854 44
No 462
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=83.01 E-value=0.8 Score=42.57 Aligned_cols=36 Identities=31% Similarity=0.381 Sum_probs=28.5
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++|+.|.++|++|+ +.|.
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 59 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVI-ISYR 59 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEE-EEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3578999999985 8999999999999999998 4554
No 463
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=82.97 E-value=0.98 Score=40.95 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=29.6
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.+.
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHG 38 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEC
Confidence 367899999985 9999999999999999998543
No 464
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=82.95 E-value=2.5 Score=41.16 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=29.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 236 (410)
-.|.+|.|+|.|.||..+++++...|++|+++.
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~ 220 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEe
Confidence 368899999999999999999999999999654
No 465
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=82.94 E-value=1.4 Score=40.94 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=29.9
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++++++.|.|. |.+|+++++.|.++|++|+.+ +.
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~-~r 64 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGC-AR 64 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-EC
Confidence 78899999985 999999999999999999854 44
No 466
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=82.93 E-value=1.3 Score=40.64 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 46 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVV-SSR 46 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 3478999999985 89999999999999999984 454
No 467
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=82.88 E-value=1.6 Score=40.90 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~-~~r 50 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVI-ASR 50 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999985 99999999999999999984 444
No 468
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=82.87 E-value=2.5 Score=40.44 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=29.8
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
-.|.+|.|+|. |.+|..+++++...|++|+++.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 181 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA 181 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 46899999998 9999999999999999999654
No 469
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=82.85 E-value=0.99 Score=46.83 Aligned_cols=108 Identities=15% Similarity=0.194 Sum_probs=61.1
Q ss_pred HhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCceeCCCCCCHHHHHHHHHhCCCcccCCCCeeecCCccc
Q 015287 199 EHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIKNPNGIDVPALLKYKKSNKSLNDFQGGNAMDLNDLL 278 (410)
Q Consensus 199 ~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~~~~GlDi~~l~~~~~~~g~v~~~~~~~~i~~~~ll 278 (410)
.++...+..+++|.|+|.+|+.+|+.|.+.|..|+ +.|.+....++-. ..+. +.. +..+.|
T Consensus 341 ~~~~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~-vid~d~~~~~~~~-------------~~i~----gD~-t~~~~L 401 (565)
T 4gx0_A 341 LIGEAPEDELIFIIGHGRIGCAAAAFLDRKPVPFI-LIDRQESPVCNDH-------------VVVY----GDA-TVGQTL 401 (565)
T ss_dssp ------CCCCEEEECCSHHHHHHHHHHHHTTCCEE-EEESSCCSSCCSS-------------CEEE----SCS-SSSTHH
T ss_pred HhcCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEE-EEECChHHHhhcC-------------CEEE----eCC-CCHHHH
Confidence 34444233899999999999999999999999998 6676532221110 0010 011 223333
Q ss_pred ----ccccceEeecccCC---ccccccccccc--ceEEEecCCCCCCHHHHHHHHhCCce
Q 015287 279 ----VHECDVLVPCALGG---VLNKENAADVK--AKFIIEAANHPTDPEADEILSKKGVV 329 (410)
Q Consensus 279 ----~~~~DvliPaA~~~---~I~~~na~~i~--akiIvEgAN~p~t~~A~~iL~~rGI~ 329 (410)
-.++|.+|-+.-.+ .+..-.|+++. .++|+-.-| + +..++|++-|+-
T Consensus 402 ~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~iiar~~~-~---~~~~~l~~~G~d 457 (565)
T 4gx0_A 402 RQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIVARANG-E---ENVDQLYAAGAD 457 (565)
T ss_dssp HHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEESS-T---TSHHHHHHHTCS
T ss_pred HhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEEEEECC-H---HHHHHHHHcCCC
Confidence 23788888776433 22233445543 467776644 3 334677888873
No 470
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=82.75 E-value=1.1 Score=42.55 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=28.1
Q ss_pred CCCCeEEEEc-cChHHHHHHHHHHHCCCEEEEEEC
Q 015287 204 ISNMKFAIQG-FGNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 204 l~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD 237 (410)
+++++|.|.| .|-+|+++++.|.++|++|+++..
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 4678999999 699999999999999999987654
No 471
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=82.72 E-value=1.2 Score=47.15 Aligned_cols=36 Identities=31% Similarity=0.408 Sum_probs=30.8
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++|+++.|.|. |.+|+.+|+.|.++|++|+ +.|.
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv-~~~r 51 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVV-VNDL 51 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EC--
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 4689999999996 8899999999999999998 6665
No 472
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=82.71 E-value=2.6 Score=40.92 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=29.3
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHC-CCEEEEEE
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEH-GGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVs 236 (410)
-.|.+|.|+|.|.||..+++++... |++|++++
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~ 218 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALD 218 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence 3688999999999999999999988 99998654
No 473
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=82.65 E-value=1.1 Score=40.26 Aligned_cols=33 Identities=30% Similarity=0.329 Sum_probs=29.1
Q ss_pred CCCCeEEEEc-cChHHHHHHHHHHHCCC--EEEEEE
Q 015287 204 ISNMKFAIQG-FGNVGSWAAKFFHEHGG--KVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqG-fGnVG~~~a~~L~~~Ga--kvVaVs 236 (410)
+++++|.|.| .|.+|+++++.|.++|+ +|++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~ 51 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIG 51 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence 4678999999 59999999999999999 998654
No 474
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=82.65 E-value=1.4 Score=41.82 Aligned_cols=33 Identities=36% Similarity=0.541 Sum_probs=28.4
Q ss_pred CCCCeEEEEc-cChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQG-FGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVs 236 (410)
+++++|.|.| .|.+|+++++.|.+.|++|+++.
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~ 52 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGID 52 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEE
Confidence 6788999999 59999999999999999999764
No 475
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=82.60 E-value=1.4 Score=41.85 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=29.0
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEEC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 237 (410)
+++++|.|.|. |.+|+++++.|.+.|.+|+++.-
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 67889999997 99999999999999999997653
No 476
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=82.58 E-value=1.8 Score=38.68 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=28.7
Q ss_pred CCCCeEEEEc-cChHHHHHHHHHHHC--CCEEEEEE
Q 015287 204 ISNMKFAIQG-FGNVGSWAAKFFHEH--GGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqG-fGnVG~~~a~~L~~~--GakvVaVs 236 (410)
+++++|.|.| .|.+|+++++.|.++ |++|++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4678999999 599999999999999 89998654
No 477
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=82.55 E-value=1.7 Score=40.10 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=29.8
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 39 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVAL-VDW 39 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEE-EEC
Confidence 67889999995 99999999999999999984 454
No 478
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=82.52 E-value=1.3 Score=40.81 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=30.1
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
++++++.|.|. |.+|+++++.|.++|++|+ +.|.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r~ 37 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIV-LNGFG 37 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EECCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEE-EEeCC
Confidence 57889999985 8999999999999999988 55653
No 479
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=82.51 E-value=1.7 Score=40.51 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+.+++.|.++|++|+. .|.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 54 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFV-CAR 54 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 368899999995 89999999999999999984 454
No 480
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=82.50 E-value=1.1 Score=42.69 Aligned_cols=31 Identities=26% Similarity=0.281 Sum_probs=28.3
Q ss_pred eEEEEccChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 208 KFAIQGFGNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 208 ~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
-|+|+|.|.+|..+|..|+++|.+|+ |-|.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~-v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTL-MIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEE-EECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEE-EEeCC
Confidence 38999999999999999999999998 88864
No 481
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=82.44 E-value=1.4 Score=40.85 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=29.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
++++++.|.|. |.+|+.+++.|.++|++|+.++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 39 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS 39 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 78899999995 9999999999999999998543
No 482
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=82.43 E-value=2.2 Score=41.59 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=29.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~ 238 (410)
-.|.+|+|+|.|.||..+++++...|+ +|++ +|.
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~-~~~ 224 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIG-VGT 224 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEE-ECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE-ECC
Confidence 368899999999999999999999999 7875 443
No 483
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=82.35 E-value=1.8 Score=40.25 Aligned_cols=36 Identities=14% Similarity=0.108 Sum_probs=31.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+++++.|.++|++|+ +.|.
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 53 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVY-TCSR 53 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEE-EEeC
Confidence 3578999999995 9999999999999999998 4454
No 484
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=82.29 E-value=1.3 Score=39.40 Aligned_cols=32 Identities=28% Similarity=0.247 Sum_probs=27.9
Q ss_pred CeEEEEc-cChHHHHHHHHHHHCCCEEEEEECC
Q 015287 207 MKFAIQG-FGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 207 ~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++|.|.| .|.+|+++++.|.++|++|++++-.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4799999 6999999999999999999976543
No 485
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=82.26 E-value=1.3 Score=40.27 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=29.1
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
++++++.|.|. |.+|+.+++.|.++|++|+.+.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 35 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNY 35 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 67899999984 9999999999999999998543
No 486
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=82.19 E-value=1.4 Score=40.17 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+++++.|.++|++|+. .|.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 38 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIA-TDI 38 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EEC
Confidence 478899999995 99999999999999999984 454
No 487
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=82.16 E-value=1.1 Score=43.23 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=27.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHCCCEEEEEECC
Q 015287 206 NMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 206 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.++|+|.|.|++|..+|..|.+.|..|+ +.|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~-~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAIN-VLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEE-EECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 4689999999999999999999999887 4444
No 488
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=82.12 E-value=1.6 Score=41.58 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=30.2
Q ss_pred CCCCCCeEEEEcc---ChHHHHHHHHHHHCCCEEEEE
Q 015287 202 KSISNMKFAIQGF---GNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 202 ~~l~g~~vaIqGf---GnVG~~~a~~L~~~GakvVaV 235 (410)
.+++|+++.|.|. |.+|+.+|+.|.++|++|+.+
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~ 41 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALG 41 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEE
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEE
Confidence 3578999999996 899999999999999999854
No 489
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=82.08 E-value=1.2 Score=41.53 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=29.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 204 ISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 204 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
++++++.|.|. |.+|+.+|+.|.++|++|+ +.|.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~r 36 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKIL-LGAR 36 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEE-EEEC
Confidence 46789999995 8999999999999999998 4555
No 490
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=82.05 E-value=1.6 Score=40.48 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=30.5
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEE
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 236 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+.+.
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 49 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNY 49 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 3589999999985 8999999999999999998443
No 491
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=82.03 E-value=1.4 Score=43.01 Aligned_cols=35 Identities=29% Similarity=0.309 Sum_probs=29.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHCCC-EEEEEECCC
Q 015287 204 ISNMKFAIQGFGNVGSWAAKFFHEHGG-KVVAVSDIT 239 (410)
Q Consensus 204 l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~ 239 (410)
++.++|+|.|.|+||+.++..|...|. .|+ +.|.+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~-L~Di~ 40 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVV-LFDIA 40 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEE-EEeCC
Confidence 566799999999999999999998887 765 77764
No 492
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=81.97 E-value=1.3 Score=42.26 Aligned_cols=34 Identities=21% Similarity=0.375 Sum_probs=29.7
Q ss_pred CCCCeEEEEc-cChHHHHHHHHHHHCCCEEEEEEC
Q 015287 204 ISNMKFAIQG-FGNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 204 l~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD 237 (410)
+++++|.|.| .|.+|+++++.|.++|++|+++.-
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 41 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL 41 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeC
Confidence 4678999999 599999999999999999996543
No 493
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=81.96 E-value=1.9 Score=40.03 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=32.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECCC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDIT 239 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 239 (410)
.+++|+++.|.|. |.+|+++|+.|.++|++|+ +.|.+
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~-~~~r~ 44 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADII-AVDIA 44 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEECC
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCCEEE-EEecc
Confidence 4589999999995 8999999999999999998 55653
No 494
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=81.93 E-value=1.5 Score=40.95 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=31.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 202 KSISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 202 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
.+++++++.|.|. |.+|+.+|+.|.++|++|+. .|.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~-~~r 60 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIG-TAT 60 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 4588999999985 89999999999999999984 454
No 495
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=81.93 E-value=2.8 Score=41.86 Aligned_cols=44 Identities=16% Similarity=0.292 Sum_probs=35.1
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHC-CCEEEEE-ECCCCceeCCCCCCHHHHHHHHHhC
Q 015287 207 MKFAIQGF-GNVGSWAAKFFHEH-GGKVVAV-SDITGAIKNPNGIDVPALLKYKKSN 260 (410)
Q Consensus 207 ~~vaIqGf-GnVG~~~a~~L~~~-GakvVaV-sD~~G~i~~~~GlDi~~l~~~~~~~ 260 (410)
++|+|.|+ |.+|...++.+.++ .++|+|+ +++ +++.|.+..++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~----------n~~~l~~q~~~f 50 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHS----------NLELAFKIVKEF 50 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESS----------CHHHHHHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccC----------CHHHHHHHHHHc
Confidence 68999995 99999999999876 6899999 443 577777765543
No 496
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=81.88 E-value=1.4 Score=40.39 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=29.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEE
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAV 235 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 235 (410)
+++++++.|.|. |.+|+++++.|.++|++|+.+
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~ 44 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTC 44 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 478999999985 999999999999999999854
No 497
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.87 E-value=1.9 Score=40.05 Aligned_cols=35 Identities=26% Similarity=0.426 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHCCCEEEEEECC
Q 015287 203 SISNMKFAIQGF-GNVGSWAAKFFHEHGGKVVAVSDI 238 (410)
Q Consensus 203 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 238 (410)
+++++++.|.|. |.+|+.+++.|.++|++|+. .|.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~-~~r 38 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVA-VDR 38 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 378899999985 89999999999999999984 454
No 498
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=81.80 E-value=3.1 Score=34.83 Aligned_cols=63 Identities=16% Similarity=0.203 Sum_probs=49.1
Q ss_pred CCchhHHHHHHHHHHHHH-HhCCCCCCCeEEEEccChHHHHHHHHHHHCCCEEEEEECCCCcee
Q 015287 181 REAATGLGVFFATEALLA-EHGKSISNMKFAIQGFGNVGSWAAKFFHEHGGKVVAVSDITGAIK 243 (410)
Q Consensus 181 r~~aTg~Gv~~~~~~~~~-~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~ 243 (410)
....|-|....+.+.+.+ .....++...|.|.|+|.=-..+.+.|...|.+|+.|.|....-+
T Consensus 43 ~rk~tp~AA~~aa~~~~~~~~~~Gi~~v~v~vkG~G~Gr~~airaL~~~Gl~I~~I~DvTpiph 106 (117)
T 3r8n_K 43 SRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPH 106 (117)
T ss_dssp GGGSSHHHHHHHHHHHHHHHTTSCCCEEEEEEECSSSSTTHHHHHHHHTTCEEEEEEECCCCCS
T ss_pred CccCCHHHHHHHHHHHHHHHHHhCCcEEEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeCCCCC
Confidence 345777777777777766 334557888999999998777788999999999999999875444
No 499
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=81.80 E-value=1.5 Score=41.10 Aligned_cols=31 Identities=29% Similarity=0.461 Sum_probs=27.6
Q ss_pred CCeEEEEc-cChHHHHHHHHHHHCCCEEEEEE
Q 015287 206 NMKFAIQG-FGNVGSWAAKFFHEHGGKVVAVS 236 (410)
Q Consensus 206 g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVs 236 (410)
|++|.|.| .|.+|+++++.|.++|++|+++.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEE
Confidence 57899999 49999999999999999998654
No 500
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=81.79 E-value=1.8 Score=40.97 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=28.6
Q ss_pred CCeEEEEc-cChHHHHHHHHHHHCCCEEEEEEC
Q 015287 206 NMKFAIQG-FGNVGSWAAKFFHEHGGKVVAVSD 237 (410)
Q Consensus 206 g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD 237 (410)
+++|.|.| .|-+|+++++.|.++|++|+++..
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 68999999 599999999999999999987654
Done!