Query 015290
Match_columns 409
No_of_seqs 455 out of 1472
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 10:00:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 5.2E-43 1.8E-47 308.1 35.8 280 29-408 29-314 (321)
2 1got_B GT-beta; complex (GTP-b 100.0 1.9E-42 6.6E-47 307.4 38.1 279 29-408 52-336 (340)
3 1vyh_C Platelet-activating fac 100.0 5E-43 1.7E-47 319.0 35.1 279 28-408 104-404 (410)
4 3dw8_B Serine/threonine-protei 100.0 2.4E-42 8.3E-47 318.6 33.2 359 8-408 6-366 (447)
5 2ynn_A Coatomer subunit beta'; 100.0 1.2E-41 4.2E-46 297.4 34.7 278 30-407 11-295 (304)
6 2pbi_B Guanine nucleotide-bind 100.0 3E-41 1E-45 301.2 35.3 286 29-408 61-350 (354)
7 3frx_A Guanine nucleotide-bind 100.0 2.4E-40 8.1E-45 291.2 37.5 288 30-408 15-310 (319)
8 3iz6_a 40S ribosomal protein R 100.0 5E-41 1.7E-45 302.9 32.5 297 29-408 63-368 (380)
9 4g56_B MGC81050 protein; prote 100.0 7E-41 2.4E-45 299.0 30.4 287 29-408 39-336 (357)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-40 6.9E-45 294.9 33.3 300 31-408 14-328 (345)
11 2xzm_R RACK1; ribosome, transl 100.0 1.7E-39 5.9E-44 288.8 36.6 294 30-408 19-333 (343)
12 4gqb_B Methylosome protein 50; 100.0 4.3E-40 1.5E-44 291.6 31.9 294 28-408 26-324 (344)
13 4ery_A WD repeat-containing pr 100.0 7.4E-39 2.5E-43 281.1 39.1 281 30-408 21-305 (312)
14 1erj_A Transcriptional repress 100.0 3.2E-39 1.1E-43 292.4 34.7 307 29-408 61-382 (393)
15 4aow_A Guanine nucleotide-bind 100.0 4.4E-38 1.5E-42 279.4 39.2 292 29-408 35-330 (340)
16 1nr0_A Actin interacting prote 100.0 4.4E-38 1.5E-42 300.9 35.7 297 30-408 188-604 (611)
17 2pm7_B Protein transport prote 100.0 3.7E-38 1.3E-42 274.4 29.9 249 29-408 6-278 (297)
18 2hes_X YDR267CP; beta-propelle 100.0 1.9E-37 6.6E-42 274.0 34.4 287 30-408 12-321 (330)
19 3dm0_A Maltose-binding peripla 100.0 1.5E-37 5.1E-42 302.0 36.4 300 29-408 379-686 (694)
20 1nr0_A Actin interacting prote 100.0 7.2E-38 2.5E-42 299.4 33.1 299 31-408 17-348 (611)
21 2ymu_A WD-40 repeat protein; u 100.0 2.1E-37 7E-42 295.0 36.2 272 29-408 300-573 (577)
22 3zwl_B Eukaryotic translation 100.0 9.1E-37 3.1E-41 273.8 36.2 283 28-408 28-339 (369)
23 3bg1_A Protein SEC13 homolog; 100.0 4.2E-38 1.4E-42 276.5 24.3 250 29-408 10-286 (316)
24 4e54_B DNA damage-binding prot 100.0 2.9E-37 1E-41 283.4 28.6 295 30-408 117-423 (435)
25 1k8k_C P40, ARP2/3 complex 41 100.0 1.8E-36 6.3E-41 272.4 31.5 250 31-357 7-274 (372)
26 2ymu_A WD-40 repeat protein; u 100.0 5.2E-36 1.8E-40 285.4 36.2 272 29-408 259-532 (577)
27 3gre_A Serine/threonine-protei 100.0 8.7E-37 3E-41 280.7 29.3 317 30-408 61-433 (437)
28 3ow8_A WD repeat-containing pr 100.0 4E-36 1.4E-40 264.1 31.9 242 29-356 77-320 (321)
29 1vyh_C Platelet-activating fac 100.0 4.1E-36 1.4E-40 273.4 31.6 243 28-356 146-410 (410)
30 4gqb_B Methylosome protein 50; 100.0 6.6E-36 2.2E-40 264.8 32.0 247 30-357 80-331 (344)
31 1gxr_A ESG1, transducin-like e 100.0 2.7E-35 9.1E-40 261.0 35.6 280 28-408 47-330 (337)
32 3ei3_B DNA damage-binding prot 100.0 1.3E-35 4.5E-40 268.0 33.9 290 30-408 71-375 (383)
33 2ynn_A Coatomer subunit beta'; 100.0 1.2E-35 3.9E-40 259.5 30.6 244 93-408 5-252 (304)
34 1r5m_A SIR4-interacting protei 100.0 3.6E-35 1.2E-39 268.6 34.7 286 31-408 107-418 (425)
35 2pm9_A Protein WEB1, protein t 100.0 5.7E-36 2E-40 273.4 28.6 317 11-408 47-407 (416)
36 4h5i_A Guanine nucleotide-exch 100.0 2.4E-35 8.3E-40 263.9 31.1 297 32-408 14-336 (365)
37 3k26_A Polycomb protein EED; W 100.0 7.4E-36 2.5E-40 267.7 27.8 304 30-408 16-359 (366)
38 1sq9_A Antiviral protein SKI8; 100.0 2.5E-35 8.6E-40 267.4 30.7 302 30-408 14-388 (397)
39 3dwl_C Actin-related protein 2 100.0 1.5E-36 5.2E-41 273.6 22.1 251 31-356 10-280 (377)
40 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-34 6.3E-39 256.5 33.1 264 29-362 58-339 (345)
41 2pm9_A Protein WEB1, protein t 100.0 2.5E-35 8.7E-40 269.0 27.1 290 31-408 11-330 (416)
42 1got_B GT-beta; complex (GTP-b 100.0 3.4E-34 1.2E-38 254.3 32.9 244 30-354 95-340 (340)
43 4g56_B MGC81050 protein; prote 100.0 1.2E-34 3.9E-39 258.8 29.7 253 28-361 90-347 (357)
44 3odt_A Protein DOA1; ubiquitin 100.0 5.3E-34 1.8E-38 250.0 32.8 267 31-408 17-289 (313)
45 4a11_B DNA excision repair pro 100.0 1.3E-33 4.3E-38 256.9 36.5 307 29-408 40-358 (408)
46 3i2n_A WD repeat-containing pr 100.0 2.7E-34 9.4E-39 256.6 30.9 290 30-408 16-346 (357)
47 1yfq_A Cell cycle arrest prote 100.0 1.5E-34 5.2E-39 256.8 28.9 292 30-407 9-315 (342)
48 3frx_A Guanine nucleotide-bind 100.0 7.6E-34 2.6E-38 249.7 32.9 254 29-357 62-317 (319)
49 3f3f_A Nucleoporin SEH1; struc 100.0 4.1E-34 1.4E-38 254.4 31.0 261 29-408 8-330 (351)
50 3jrp_A Fusion protein of prote 100.0 1.3E-34 4.5E-39 260.8 27.4 249 29-408 8-280 (379)
51 4gga_A P55CDC, cell division c 100.0 1.9E-33 6.6E-38 256.9 33.5 276 34-408 107-388 (420)
52 2xzm_R RACK1; ribosome, transl 100.0 3.4E-33 1.2E-37 248.2 33.3 265 29-357 73-340 (343)
53 3mmy_A MRNA export factor; mRN 100.0 3.1E-33 1E-37 250.8 33.2 292 30-408 37-339 (368)
54 1erj_A Transcriptional repress 100.0 2.6E-33 8.9E-38 253.6 32.2 250 32-357 123-389 (393)
55 1r5m_A SIR4-interacting protei 100.0 1.5E-33 5.3E-38 257.7 30.8 287 27-408 40-354 (425)
56 3iz6_a 40S ribosomal protein R 100.0 3.2E-34 1.1E-38 258.4 25.8 266 30-357 106-375 (380)
57 4aez_A CDC20, WD repeat-contai 100.0 2E-33 6.7E-38 255.3 30.6 270 34-408 95-373 (401)
58 4ggc_A P55CDC, cell division c 100.0 3.5E-33 1.2E-37 245.4 31.2 274 34-408 27-308 (318)
59 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-34 3.8E-39 269.5 22.7 257 28-408 129-421 (524)
60 2pbi_B Guanine nucleotide-bind 100.0 6E-33 2.1E-37 247.4 32.1 248 31-354 105-354 (354)
61 3sfz_A APAF-1, apoptotic pepti 100.0 6E-33 2.1E-37 286.7 36.8 249 28-355 611-911 (1249)
62 3vl1_A 26S proteasome regulato 100.0 2.7E-34 9.2E-39 262.7 23.8 277 33-408 57-358 (420)
63 2hes_X YDR267CP; beta-propelle 100.0 5.1E-33 1.7E-37 245.6 29.9 253 31-357 57-328 (330)
64 3mkq_A Coatomer beta'-subunit; 100.0 4.5E-33 1.5E-37 275.7 32.7 277 30-406 11-294 (814)
65 3v7d_B Cell division control p 100.0 1E-32 3.6E-37 255.5 32.0 285 30-407 160-455 (464)
66 1gxr_A ESG1, transducin-like e 100.0 3.2E-33 1.1E-37 247.6 27.2 280 31-408 8-289 (337)
67 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-33 4.5E-38 262.3 24.5 290 30-408 205-510 (524)
68 3vl1_A 26S proteasome regulato 100.0 6.9E-32 2.4E-36 246.7 34.8 277 33-407 98-411 (420)
69 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-32 4.8E-37 272.3 31.5 211 29-301 14-244 (902)
70 1p22_A F-BOX/WD-repeat protein 100.0 9.3E-32 3.2E-36 246.9 33.4 266 30-408 131-407 (435)
71 4ery_A WD repeat-containing pr 100.0 1.6E-31 5.4E-36 234.3 32.9 249 88-408 10-261 (312)
72 3jro_A Fusion protein of prote 100.0 9.3E-33 3.2E-37 269.8 26.7 247 29-408 6-278 (753)
73 1pgu_A Actin interacting prote 100.0 1.2E-31 4.3E-36 257.0 33.9 285 30-408 201-607 (615)
74 3sfz_A APAF-1, apoptotic pepti 100.0 5.2E-33 1.8E-37 287.2 25.5 282 31-408 960-1242(1249)
75 3v7d_B Cell division control p 100.0 2E-31 6.8E-36 246.9 33.4 274 29-408 118-414 (464)
76 2oaj_A Protein SNI1; WD40 repe 100.0 2E-31 6.9E-36 264.0 35.5 172 29-252 55-245 (902)
77 2xyi_A Probable histone-bindin 100.0 3.5E-32 1.2E-36 249.2 26.3 258 28-408 124-403 (430)
78 1pgu_A Actin interacting prote 100.0 3.2E-31 1.1E-35 254.2 32.5 288 29-408 15-321 (615)
79 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.1E-30 7.3E-35 238.6 35.0 266 31-407 158-430 (445)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 4E-31 1.4E-35 240.2 28.8 244 28-403 77-332 (402)
81 3k26_A Polycomb protein EED; W 100.0 1.4E-31 4.9E-36 239.7 25.3 259 31-356 68-365 (366)
82 3dm0_A Maltose-binding peripla 100.0 8.5E-31 2.9E-35 254.5 32.1 255 28-356 426-692 (694)
83 4aow_A Guanine nucleotide-bind 100.0 2.4E-30 8.1E-35 229.5 31.2 253 29-357 83-337 (340)
84 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-31 4.5E-36 243.3 23.3 261 32-407 15-290 (588)
85 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-30 1.1E-34 255.4 34.7 243 30-357 53-302 (814)
86 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.4E-30 8.1E-35 238.6 31.5 245 114-404 103-374 (450)
87 4gq1_A NUP37; propeller, trans 100.0 7.6E-32 2.6E-36 243.8 20.8 257 33-407 90-382 (393)
88 3i2n_A WD repeat-containing pr 100.0 9.1E-31 3.1E-35 233.8 27.6 269 28-357 61-353 (357)
89 3dw8_B Serine/threonine-protei 100.0 2.7E-30 9.4E-35 238.0 31.5 290 33-407 94-439 (447)
90 2pm7_B Protein transport prote 100.0 1.5E-30 5.3E-35 226.2 28.1 213 28-357 49-285 (297)
91 4gga_A P55CDC, cell division c 100.0 3.7E-30 1.3E-34 235.1 31.3 255 30-370 145-407 (420)
92 1sq9_A Antiviral protein SKI8; 100.0 2.1E-30 7.3E-35 235.0 28.1 274 29-357 59-395 (397)
93 3lrv_A PRE-mRNA-splicing facto 100.0 4.1E-31 1.4E-35 234.8 22.8 238 37-408 41-285 (343)
94 4h5i_A Guanine nucleotide-exch 100.0 1.7E-30 6E-35 232.3 26.2 204 31-357 132-343 (365)
95 4aez_A CDC20, WD repeat-contai 100.0 6.4E-30 2.2E-34 232.1 29.7 246 31-364 133-386 (401)
96 1k8k_C P40, ARP2/3 complex 41 100.0 6.9E-30 2.4E-34 229.5 29.6 264 30-357 50-361 (372)
97 3vu4_A KMHSV2; beta-propeller 100.0 6.7E-30 2.3E-34 227.8 29.1 284 30-408 17-329 (355)
98 3ei3_B DNA damage-binding prot 100.0 3E-30 1E-34 232.9 26.8 252 30-357 116-382 (383)
99 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.4E-29 8.3E-34 231.6 33.3 265 28-408 114-384 (445)
100 3dwl_C Actin-related protein 2 100.0 1.6E-31 5.6E-36 240.6 17.9 252 114-407 12-274 (377)
101 2aq5_A Coronin-1A; WD40 repeat 100.0 5.9E-30 2E-34 232.5 27.5 244 35-408 37-292 (402)
102 3zwl_B Eukaryotic translation 100.0 3.5E-29 1.2E-33 224.4 31.6 254 30-357 72-346 (369)
103 2j04_A TAU60, YPL007P, hypothe 100.0 3.5E-31 1.2E-35 240.5 18.3 263 26-404 79-350 (588)
104 3bg1_A Protein SEC13 homolog; 100.0 5.6E-30 1.9E-34 224.7 24.7 212 29-357 54-293 (316)
105 2w18_A PALB2, fancn, partner a 100.0 1E-28 3.6E-33 210.9 28.8 269 34-408 41-350 (356)
106 3gre_A Serine/threonine-protei 100.0 5.7E-30 1.9E-34 235.3 21.9 281 39-408 34-352 (437)
107 3odt_A Protein DOA1; ubiquitin 100.0 1E-28 3.5E-33 216.3 28.9 244 30-364 57-302 (313)
108 4e54_B DNA damage-binding prot 100.0 3.1E-29 1.1E-33 230.1 26.1 239 114-403 120-363 (435)
109 4ggc_A P55CDC, cell division c 100.0 3.2E-28 1.1E-32 213.7 31.3 244 30-357 65-315 (318)
110 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-28 4.5E-33 218.6 24.4 237 33-408 77-326 (343)
111 3jrp_A Fusion protein of prote 100.0 6.6E-28 2.3E-32 217.0 27.7 213 30-357 53-287 (379)
112 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-27 8E-32 210.6 28.1 249 30-365 55-344 (351)
113 3bws_A Protein LP49; two-domai 100.0 2E-27 6.8E-32 218.0 28.0 279 31-408 121-425 (433)
114 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-27 5.8E-32 218.6 26.4 240 30-357 171-414 (435)
115 1yfq_A Cell cycle arrest prote 100.0 2.7E-27 9.1E-32 210.1 24.9 239 114-408 12-275 (342)
116 3jro_A Fusion protein of prote 100.0 1.9E-27 6.3E-32 232.4 25.6 213 30-357 51-285 (753)
117 1l0q_A Surface layer protein; 100.0 3.9E-26 1.3E-30 206.5 32.1 257 45-408 3-268 (391)
118 4a11_B DNA excision repair pro 100.0 1.1E-26 3.9E-31 211.0 28.3 261 30-367 97-374 (408)
119 2w18_A PALB2, fancn, partner a 100.0 2.9E-27 1E-31 202.0 22.7 223 31-355 110-355 (356)
120 3mmy_A MRNA export factor; mRN 100.0 3.7E-27 1.3E-31 211.1 24.6 242 28-354 82-343 (368)
121 2xyi_A Probable histone-bindin 100.0 4.7E-27 1.6E-31 215.1 25.2 227 29-357 178-410 (430)
122 4gq1_A NUP37; propeller, trans 100.0 2E-27 6.7E-32 214.9 21.2 227 28-356 132-388 (393)
123 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8E-26 2.7E-30 208.3 29.2 255 30-357 100-391 (450)
124 1l0q_A Surface layer protein; 99.9 1.4E-24 4.6E-29 196.4 34.4 250 30-371 29-288 (391)
125 3vu4_A KMHSV2; beta-propeller 99.9 3.3E-25 1.1E-29 197.5 26.1 239 114-408 20-264 (355)
126 3bws_A Protein LP49; two-domai 99.9 8.9E-24 3E-28 193.7 31.2 239 30-356 167-431 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-23 4.3E-28 191.1 30.1 221 27-397 173-410 (415)
128 1nir_A Nitrite reductase; hemo 99.9 1.4E-22 4.7E-27 189.8 32.2 287 34-403 180-497 (543)
129 2ojh_A Uncharacterized protein 99.9 8.7E-23 3E-27 176.8 27.1 236 28-407 37-294 (297)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.4E-22 8.3E-27 182.6 29.8 213 44-406 143-375 (415)
131 3vgz_A Uncharacterized protein 99.9 7.5E-22 2.6E-26 175.7 32.5 284 31-405 39-334 (353)
132 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-22 5E-27 198.4 26.4 287 32-406 36-402 (741)
133 3u4y_A Uncharacterized protein 99.9 9.7E-21 3.3E-25 167.0 32.3 278 38-406 3-294 (331)
134 1nir_A Nitrite reductase; hemo 99.9 3.3E-21 1.1E-25 180.5 28.6 268 39-403 144-439 (543)
135 1ri6_A Putative isomerase YBHE 99.9 1.4E-20 4.8E-25 166.6 31.0 281 29-398 34-336 (343)
136 1xfd_A DIP, dipeptidyl aminope 99.9 6.4E-22 2.2E-26 193.3 24.0 282 34-405 18-380 (723)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 4.9E-22 1.7E-26 181.2 21.5 229 32-357 36-278 (434)
138 1ri6_A Putative isomerase YBHE 99.9 2.1E-20 7.2E-25 165.5 30.0 248 114-408 38-301 (343)
139 3hfq_A Uncharacterized protein 99.9 5E-21 1.7E-25 170.1 25.1 257 30-405 37-306 (347)
140 3o4h_A Acylamino-acid-releasin 99.9 5.3E-21 1.8E-25 182.0 23.4 260 32-406 21-303 (582)
141 2ecf_A Dipeptidyl peptidase IV 99.9 7.4E-21 2.5E-25 186.3 24.5 281 34-404 110-444 (741)
142 1k32_A Tricorn protease; prote 99.9 2.3E-20 7.8E-25 189.1 28.5 280 29-407 200-494 (1045)
143 2oit_A Nucleoporin 214KDA; NH2 99.9 8.3E-20 2.9E-24 166.5 29.4 229 29-356 89-332 (434)
144 1k32_A Tricorn protease; prote 99.9 5.2E-20 1.8E-24 186.5 29.0 285 27-406 47-442 (1045)
145 3u4y_A Uncharacterized protein 99.9 4.9E-19 1.7E-23 156.0 29.7 259 32-367 40-312 (331)
146 2ojh_A Uncharacterized protein 99.9 3.6E-20 1.2E-24 160.2 22.1 215 49-406 17-238 (297)
147 2z3z_A Dipeptidyl aminopeptida 99.9 7.2E-20 2.5E-24 178.2 25.7 285 33-405 82-421 (706)
148 1pby_B Quinohemoprotein amine 99.9 2.7E-19 9.3E-24 157.9 25.9 265 45-408 2-303 (337)
149 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-19 4.2E-24 177.1 25.1 291 34-402 62-427 (723)
150 1jmx_B Amine dehydrogenase; ox 99.8 2.6E-19 9E-24 158.9 23.3 245 37-408 4-318 (349)
151 3pe7_A Oligogalacturonate lyas 99.8 3.2E-19 1.1E-23 160.9 23.8 288 31-404 29-370 (388)
152 1z68_A Fibroblast activation p 99.8 2.5E-20 8.7E-25 181.8 16.9 236 37-401 20-328 (719)
153 3scy_A Hypothetical bacterial 99.8 1.5E-17 5E-22 148.5 31.3 265 31-356 48-336 (361)
154 4a5s_A Dipeptidyl peptidase 4 99.8 5.8E-19 2E-23 172.4 23.1 243 34-404 18-339 (740)
155 3scy_A Hypothetical bacterial 99.8 1.2E-17 4.2E-22 149.0 29.8 245 114-404 50-325 (361)
156 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.1E-17 2.1E-21 144.6 33.1 252 114-408 40-334 (365)
157 1pby_B Quinohemoprotein amine 99.8 6E-18 2.1E-22 149.2 24.7 248 34-370 35-322 (337)
158 2z3z_A Dipeptidyl aminopeptida 99.8 6.6E-18 2.3E-22 164.4 26.4 259 30-360 118-437 (706)
159 1q7f_A NHL, brain tumor CG1071 99.8 4.7E-16 1.6E-20 133.9 31.0 255 10-408 9-273 (286)
160 3o4h_A Acylamino-acid-releasin 99.8 5E-18 1.7E-22 161.4 20.1 229 114-408 22-269 (582)
161 3vgz_A Uncharacterized protein 99.8 9.1E-17 3.1E-21 142.7 26.7 235 114-408 41-296 (353)
162 3hfq_A Uncharacterized protein 99.8 2.4E-16 8.3E-21 139.8 28.3 223 31-356 84-316 (347)
163 3c5m_A Oligogalacturonate lyas 99.8 2.9E-17 1E-21 148.3 22.2 291 34-405 37-371 (396)
164 1z68_A Fibroblast activation p 99.8 4.2E-17 1.4E-21 159.1 20.2 243 35-405 62-376 (719)
165 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.3E-16 1.5E-20 139.1 24.1 258 33-357 40-341 (365)
166 1jmx_B Amine dehydrogenase; ox 99.7 3.8E-16 1.3E-20 138.4 22.7 79 268-368 255-335 (349)
167 3fvz_A Peptidyl-glycine alpha- 99.7 2.3E-15 8E-20 132.3 27.0 252 32-408 23-315 (329)
168 3e5z_A Putative gluconolactona 99.7 3E-15 1E-19 129.6 25.1 231 31-406 26-278 (296)
169 3azo_A Aminopeptidase; POP fam 99.7 1.6E-15 5.4E-20 146.5 23.6 250 30-407 21-315 (662)
170 4a5s_A Dipeptidyl peptidase 4 99.7 2.7E-15 9.3E-20 146.5 24.1 74 36-152 65-147 (740)
171 2dg1_A DRP35, lactonase; beta 99.7 5.2E-14 1.8E-18 123.9 30.1 244 31-405 43-300 (333)
172 2oiz_A Aromatic amine dehydrog 99.7 1.3E-13 4.4E-18 122.6 30.5 263 43-397 14-360 (361)
173 3azo_A Aminopeptidase; POP fam 99.7 8.6E-15 2.9E-19 141.4 23.2 138 217-371 186-337 (662)
174 2xdw_A Prolyl endopeptidase; a 99.7 6.6E-14 2.3E-18 136.1 28.1 249 31-401 123-396 (710)
175 1rwi_B Serine/threonine-protei 99.6 3.6E-13 1.2E-17 114.7 24.9 229 34-408 25-257 (270)
176 3pe7_A Oligogalacturonate lyas 99.6 4.4E-14 1.5E-18 127.2 20.1 253 32-356 80-381 (388)
177 3no2_A Uncharacterized protein 99.6 5E-13 1.7E-17 113.9 25.3 224 43-402 4-230 (276)
178 2gop_A Trilobed protease; beta 99.6 2.8E-13 9.5E-18 119.9 24.0 241 33-407 59-322 (347)
179 2bkl_A Prolyl endopeptidase; m 99.6 9.5E-14 3.3E-18 134.6 22.5 232 31-400 119-378 (695)
180 1q7f_A NHL, brain tumor CG1071 99.6 1.1E-12 3.6E-17 112.8 26.6 201 31-357 75-280 (286)
181 2dg1_A DRP35, lactonase; beta 99.6 1.3E-13 4.4E-18 121.4 20.6 237 33-407 6-255 (333)
182 1qks_A Cytochrome CD1 nitrite 99.6 7.5E-12 2.6E-16 117.0 33.1 299 31-403 195-521 (567)
183 3c5m_A Oligogalacturonate lyas 99.6 1.4E-13 4.8E-18 124.1 18.2 252 37-356 85-381 (396)
184 3dsm_A Uncharacterized protein 99.6 1.8E-11 6.1E-16 107.3 30.4 254 33-371 44-314 (328)
185 3fvz_A Peptidyl-glycine alpha- 99.5 1.7E-12 6E-17 113.9 23.6 212 31-356 89-321 (329)
186 3g4e_A Regucalcin; six bladed 99.5 1.1E-11 3.7E-16 107.1 28.0 232 34-404 14-261 (297)
187 2z2n_A Virginiamycin B lyase; 99.5 1.1E-10 3.6E-15 100.8 34.3 272 31-405 13-286 (299)
188 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.5E-11 5E-16 107.2 26.8 234 33-403 18-286 (314)
189 2gop_A Trilobed protease; beta 99.5 1.7E-12 5.8E-17 114.8 21.0 213 31-407 13-284 (347)
190 2oiz_A Aromatic amine dehydrog 99.5 4.6E-12 1.6E-16 112.6 23.5 237 37-340 54-360 (361)
191 1qks_A Cytochrome CD1 nitrite 99.5 2.9E-11 1E-15 113.1 29.4 204 42-367 165-382 (567)
192 1yr2_A Prolyl oligopeptidase; 99.5 1E-11 3.5E-16 121.3 23.0 240 33-400 163-422 (741)
193 3dr2_A Exported gluconolactona 99.4 8E-11 2.7E-15 102.1 25.7 231 31-406 43-298 (305)
194 3sjl_D Methylamine dehydrogena 99.4 4.6E-11 1.6E-15 105.0 23.3 271 37-395 82-384 (386)
195 2qc5_A Streptogramin B lactona 99.4 1.7E-09 5.8E-14 93.2 33.1 270 32-403 19-290 (300)
196 2ghs_A AGR_C_1268P; regucalcin 99.4 3.4E-10 1.2E-14 99.0 27.9 230 34-404 50-291 (326)
197 2xdw_A Prolyl endopeptidase; a 99.4 5E-11 1.7E-15 115.9 24.5 192 114-407 125-358 (710)
198 3e5z_A Putative gluconolactona 99.4 8.8E-11 3E-15 101.4 23.6 112 217-357 170-286 (296)
199 3hrp_A Uncharacterized protein 99.4 2.7E-10 9.4E-15 102.7 26.9 265 32-408 130-403 (409)
200 1rwi_B Serine/threonine-protei 99.4 1E-10 3.5E-15 99.3 23.0 195 33-357 67-264 (270)
201 2qe8_A Uncharacterized protein 99.4 5E-10 1.7E-14 98.8 27.2 257 33-406 17-312 (343)
202 1xip_A Nucleoporin NUP159; bet 99.4 1.9E-11 6.6E-16 107.8 17.8 189 114-401 38-230 (388)
203 2bkl_A Prolyl endopeptidase; m 99.4 6E-11 2E-15 115.0 21.8 189 114-407 121-341 (695)
204 1xip_A Nucleoporin NUP159; bet 99.4 2E-11 6.7E-16 107.8 15.8 189 33-344 38-230 (388)
205 3iuj_A Prolyl endopeptidase; h 99.3 1.3E-10 4.3E-15 112.6 21.9 145 217-402 232-388 (693)
206 2mad_H Methylamine dehydrogena 99.3 8.5E-09 2.9E-13 91.6 31.7 286 39-408 27-343 (373)
207 3no2_A Uncharacterized protein 99.3 3.1E-10 1E-14 96.6 21.0 182 126-408 4-188 (276)
208 3dsm_A Uncharacterized protein 99.3 4.7E-10 1.6E-14 98.2 22.8 187 114-403 44-243 (328)
209 2z2n_A Virginiamycin B lyase; 99.3 9.9E-09 3.4E-13 88.3 31.0 239 32-357 56-295 (299)
210 2mad_H Methylamine dehydrogena 99.3 4.7E-09 1.6E-13 93.3 28.5 254 37-365 70-357 (373)
211 1yr2_A Prolyl oligopeptidase; 99.3 7.1E-10 2.4E-14 108.3 22.1 190 114-407 163-385 (741)
212 2ece_A 462AA long hypothetical 99.2 6.9E-09 2.4E-13 91.9 25.7 171 222-403 191-399 (462)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 6.5E-09 2.2E-13 90.3 25.5 116 220-357 173-299 (314)
214 3sjl_D Methylamine dehydrogena 99.2 1.3E-08 4.6E-13 89.4 27.2 288 37-407 37-355 (386)
215 3c75_H MADH, methylamine dehyd 99.2 2.2E-08 7.5E-13 89.6 25.8 253 42-365 82-409 (426)
216 2qc5_A Streptogramin B lactona 99.2 1.3E-07 4.4E-12 81.3 29.8 237 32-355 61-298 (300)
217 3g4e_A Regucalcin; six bladed 99.1 3E-08 1E-12 85.4 23.2 104 220-345 150-259 (297)
218 3hrp_A Uncharacterized protein 99.0 9E-08 3.1E-12 86.2 23.5 215 38-355 176-408 (409)
219 2hz6_A Endoplasmic reticulum t 99.0 7.7E-10 2.6E-14 98.4 7.8 188 43-366 8-200 (369)
220 1mda_H Methylamine dehydrogena 99.0 9.3E-08 3.2E-12 84.1 20.3 79 273-371 269-359 (368)
221 2ghs_A AGR_C_1268P; regucalcin 99.0 6.5E-07 2.2E-11 78.1 25.7 104 220-346 180-290 (326)
222 3dr2_A Exported gluconolactona 98.9 2.2E-07 7.7E-12 80.2 21.2 108 220-354 189-303 (305)
223 3c75_H MADH, methylamine dehyd 98.9 5.1E-07 1.8E-11 80.8 22.7 119 122-258 79-218 (426)
224 2qe8_A Uncharacterized protein 98.9 3.2E-07 1.1E-11 80.7 20.8 171 216-408 64-271 (343)
225 1npe_A Nidogen, entactin; glyc 98.9 7.8E-06 2.7E-10 68.9 28.0 220 33-397 36-263 (267)
226 1fwx_A Nitrous oxide reductase 98.8 2.5E-07 8.4E-12 85.0 18.9 110 269-403 278-406 (595)
227 3iuj_A Prolyl endopeptidase; h 98.8 1.9E-07 6.4E-12 90.4 18.6 186 114-405 129-346 (693)
228 2p4o_A Hypothetical protein; p 98.8 9E-06 3.1E-10 70.1 27.0 236 33-405 32-278 (306)
229 1kb0_A Quinohemoprotein alcoho 98.8 2.5E-06 8.5E-11 82.0 24.6 140 226-401 320-536 (677)
230 2iwa_A Glutamine cyclotransfer 98.8 6.1E-06 2.1E-10 68.6 23.3 209 34-357 22-237 (266)
231 1fwx_A Nitrous oxide reductase 98.8 5.7E-07 1.9E-11 82.7 18.4 141 195-356 255-430 (595)
232 1mda_H Methylamine dehydrogena 98.7 8.6E-07 2.9E-11 78.0 17.8 70 224-302 269-349 (368)
233 1yiq_A Quinohemoprotein alcoho 98.7 6.7E-06 2.3E-10 79.2 25.6 79 289-400 454-533 (689)
234 2iwa_A Glutamine cyclotransfer 98.7 4.1E-06 1.4E-10 69.7 20.8 198 115-403 22-224 (266)
235 2hz6_A Endoplasmic reticulum t 98.7 5.7E-09 1.9E-13 92.8 3.0 148 125-366 7-157 (369)
236 1npe_A Nidogen, entactin; glyc 98.7 4.5E-05 1.5E-09 64.2 26.5 112 220-356 80-197 (267)
237 2fp8_A Strictosidine synthase; 98.7 1.6E-05 5.4E-10 69.1 24.0 121 220-368 127-278 (322)
238 3nol_A Glutamine cyclotransfer 98.6 7.5E-06 2.6E-10 67.3 19.7 196 114-403 43-243 (262)
239 1yiq_A Quinohemoprotein alcoho 98.6 4.5E-05 1.5E-09 73.5 27.8 165 127-302 121-341 (689)
240 2ece_A 462AA long hypothetical 98.6 1E-05 3.4E-10 71.9 21.3 117 225-346 259-399 (462)
241 3nol_A Glutamine cyclotransfer 98.6 2.1E-05 7.3E-10 64.6 21.5 194 33-346 43-243 (262)
242 1kb0_A Quinohemoprotein alcoho 98.6 3.6E-05 1.2E-09 73.9 25.9 166 126-302 127-349 (677)
243 3nok_A Glutaminyl cyclase; bet 98.5 3E-05 1E-09 63.8 20.8 197 114-403 55-253 (268)
244 3qqz_A Putative uncharacterize 98.5 0.0002 6.7E-09 59.2 25.5 208 114-401 27-240 (255)
245 3mbr_X Glutamine cyclotransfer 98.5 5.9E-05 2E-09 61.4 21.9 209 90-403 8-222 (243)
246 3nok_A Glutaminyl cyclase; bet 98.5 5.8E-05 2E-09 62.1 20.4 196 33-345 55-253 (268)
247 3hxj_A Pyrrolo-quinoline quino 98.4 5E-05 1.7E-09 66.0 20.7 162 193-408 156-317 (330)
248 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00022 7.5E-09 63.3 23.7 194 127-367 143-346 (376)
249 3qqz_A Putative uncharacterize 98.3 0.00062 2.1E-08 56.2 24.3 218 33-355 27-251 (255)
250 3mbr_X Glutamine cyclotransfer 98.3 0.00042 1.4E-08 56.5 22.7 198 32-346 20-222 (243)
251 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.0004 1.4E-08 61.6 24.9 191 126-366 102-304 (376)
252 2xe4_A Oligopeptidase B; hydro 98.3 0.00075 2.6E-08 65.8 27.7 31 34-64 175-211 (751)
253 3tc9_A Hypothetical hydrolase; 98.3 0.00067 2.3E-08 61.3 25.0 71 221-299 228-301 (430)
254 3v64_C Agrin; beta propeller, 98.3 0.0018 6.3E-08 56.6 27.6 111 221-356 118-233 (349)
255 1k3i_A Galactose oxidase precu 98.2 0.00076 2.6E-08 64.7 25.7 282 37-404 190-530 (656)
256 2p4o_A Hypothetical protein; p 98.2 0.002 6.8E-08 55.3 26.4 154 220-406 73-233 (306)
257 3v65_B Low-density lipoprotein 98.2 0.0016 5.3E-08 58.0 25.0 111 221-356 161-276 (386)
258 4hw6_A Hypothetical protein, I 98.2 0.0038 1.3E-07 56.4 27.6 173 221-407 230-425 (433)
259 4a2l_A BT_4663, two-component 98.1 0.0089 3E-07 58.7 33.9 247 32-406 405-651 (795)
260 2fp8_A Strictosidine synthase; 98.1 0.0015 5E-08 56.6 22.6 112 221-356 187-312 (322)
261 1kv9_A Type II quinohemoprotei 98.1 0.0033 1.1E-07 60.3 26.8 166 127-303 117-337 (668)
262 3hxj_A Pyrrolo-quinoline quino 98.1 0.00017 5.8E-09 62.6 16.5 115 220-368 138-253 (330)
263 2ad6_A Methanol dehydrogenase 98.1 0.0037 1.3E-07 58.7 26.1 80 289-401 443-523 (571)
264 4a2l_A BT_4663, two-component 98.0 0.013 4.5E-07 57.6 34.1 290 32-402 262-560 (795)
265 1kv9_A Type II quinohemoprotei 98.0 0.0013 4.3E-08 63.2 22.0 63 289-370 437-500 (668)
266 3v65_B Low-density lipoprotein 98.0 0.0082 2.8E-07 53.3 25.9 121 219-366 202-326 (386)
267 1k3i_A Galactose oxidase precu 97.9 0.0031 1.1E-07 60.5 23.7 242 36-347 246-530 (656)
268 3v9f_A Two-component system se 97.9 0.023 7.7E-07 55.7 32.6 284 32-406 362-648 (781)
269 2xe4_A Oligopeptidase B; hydro 97.8 0.00024 8.1E-09 69.3 13.3 113 220-357 175-304 (751)
270 3v64_C Agrin; beta propeller, 97.8 0.016 5.4E-07 50.6 27.8 121 219-366 159-283 (349)
271 1flg_A Protein (quinoprotein e 97.7 0.024 8.2E-07 53.3 24.8 79 289-400 465-544 (582)
272 4hw6_A Hypothetical protein, I 97.7 0.0073 2.5E-07 54.5 20.1 113 219-356 182-303 (433)
273 1ijq_A LDL receptor, low-densi 97.7 0.023 7.9E-07 48.8 26.8 122 220-366 121-246 (316)
274 2xbg_A YCF48-like protein; pho 97.6 0.025 8.5E-07 48.9 26.8 153 218-408 162-315 (327)
275 3sov_A LRP-6, low-density lipo 97.6 0.025 8.7E-07 48.6 24.0 110 221-356 81-196 (318)
276 3sre_A PON1, serum paraoxonase 97.6 0.029 9.9E-07 48.8 23.8 145 220-405 113-287 (355)
277 1ijq_A LDL receptor, low-densi 97.6 0.029 9.8E-07 48.2 28.1 118 221-365 79-201 (316)
278 1w6s_A Methanol dehydrogenase 97.6 0.045 1.5E-06 51.5 24.8 49 338-401 483-533 (599)
279 3v9f_A Two-component system se 97.6 0.069 2.4E-06 52.3 32.0 296 33-402 211-512 (781)
280 2xbg_A YCF48-like protein; pho 97.6 0.033 1.1E-06 48.1 25.0 117 218-355 204-320 (327)
281 2ism_A Putative oxidoreductase 97.6 0.036 1.2E-06 48.5 24.1 27 33-60 31-57 (352)
282 3sov_A LRP-6, low-density lipo 97.5 0.033 1.1E-06 47.9 24.0 120 219-365 122-245 (318)
283 3m0c_C LDL receptor, low-densi 97.5 0.089 3E-06 51.2 26.9 120 219-365 471-595 (791)
284 2xzh_A Clathrin heavy chain 1; 97.5 0.038 1.3E-06 46.8 25.8 160 193-372 125-304 (365)
285 3tc9_A Hypothetical hydrolase; 97.5 0.0044 1.5E-07 56.0 15.8 141 220-402 138-287 (430)
286 1n7d_A LDL receptor, low-densi 97.5 0.0014 4.7E-08 63.2 13.2 120 221-366 498-622 (699)
287 3p5b_L Low density lipoprotein 97.4 0.057 2E-06 48.1 27.9 120 219-365 159-283 (400)
288 2p9w_A MAL S 1 allergenic prot 97.4 0.018 6.3E-07 49.0 17.9 76 220-299 138-215 (334)
289 3m0c_C LDL receptor, low-densi 97.4 0.13 4.4E-06 50.1 28.4 120 220-365 515-639 (791)
290 3a9g_A Putative uncharacterize 97.3 0.066 2.3E-06 46.8 25.9 27 33-60 29-55 (354)
291 3p5b_L Low density lipoprotein 97.3 0.082 2.8E-06 47.1 28.0 121 220-366 203-328 (400)
292 3ei3_A DNA damage-binding prot 97.3 0.2 6.8E-06 51.1 30.3 34 32-65 553-593 (1158)
293 3pbp_A Nucleoporin NUP82; beta 97.3 0.049 1.7E-06 48.0 19.3 125 220-352 67-207 (452)
294 1bpo_A Protein (clathrin); cla 97.3 0.086 2.9E-06 46.6 25.7 210 124-372 74-303 (494)
295 1n7d_A LDL receptor, low-densi 97.2 0.0075 2.6E-07 58.1 15.4 111 221-356 455-570 (699)
296 2ad6_A Methanol dehydrogenase 97.2 0.14 4.8E-06 48.0 28.5 29 127-155 115-143 (571)
297 3kya_A Putative phosphatase; s 97.2 0.1 3.5E-06 47.5 21.5 124 220-356 187-340 (496)
298 2p9w_A MAL S 1 allergenic prot 97.2 0.036 1.2E-06 47.2 17.3 173 216-407 10-207 (334)
299 4a0p_A LRP6, LRP-6, low-densit 97.1 0.18 6.3E-06 47.7 27.9 111 220-356 81-196 (628)
300 3kya_A Putative phosphatase; s 97.1 0.16 5.4E-06 46.3 26.4 71 221-298 249-340 (496)
301 1w6s_A Methanol dehydrogenase 97.1 0.21 7.2E-06 47.0 26.7 78 224-303 246-346 (599)
302 3amr_A 3-phytase; beta-propell 97.1 0.11 3.9E-06 44.6 19.1 105 238-356 98-209 (355)
303 3pbp_A Nucleoporin NUP82; beta 97.0 0.091 3.1E-06 46.3 18.1 164 225-408 27-205 (452)
304 1flg_A Protein (quinoprotein e 96.9 0.28 9.4E-06 46.1 28.4 29 127-155 117-145 (582)
305 3sre_A PON1, serum paraoxonase 96.9 0.19 6.6E-06 43.6 24.1 111 220-356 166-297 (355)
306 2ism_A Putative oxidoreductase 96.9 0.06 2.1E-06 47.0 16.5 113 220-345 32-152 (352)
307 3s94_A LRP-6, low-density lipo 96.8 0.36 1.2E-05 45.6 23.4 113 219-356 84-201 (619)
308 3s94_A LRP-6, low-density lipo 96.8 0.39 1.3E-05 45.4 24.8 204 32-364 39-249 (619)
309 3a9g_A Putative uncharacterize 96.7 0.07 2.4E-06 46.6 15.8 113 219-345 29-152 (354)
310 2g8s_A Glucose/sorbosone dehyd 96.6 0.3 1E-05 42.5 24.8 30 33-62 18-47 (353)
311 3das_A Putative oxidoreductase 96.5 0.37 1.3E-05 41.6 19.6 116 218-345 31-157 (347)
312 3amr_A 3-phytase; beta-propell 96.5 0.37 1.3E-05 41.5 24.8 128 220-367 129-273 (355)
313 3ei3_A DNA damage-binding prot 96.5 0.9 3.1E-05 46.4 23.6 113 216-356 883-998 (1158)
314 2g8s_A Glucose/sorbosone dehyd 96.4 0.15 5E-06 44.6 15.9 78 219-299 18-107 (353)
315 1xi4_A Clathrin heavy chain; a 96.4 0.19 6.4E-06 51.4 17.7 153 193-366 124-297 (1630)
316 1cru_A Protein (soluble quinop 96.3 0.4 1.4E-05 43.4 18.6 118 219-346 27-162 (454)
317 4a0p_A LRP6, LRP-6, low-densit 96.1 0.93 3.2E-05 42.9 26.7 116 220-365 124-244 (628)
318 1tl2_A L10, protein (tachylect 96.1 0.2 6.7E-06 39.9 13.1 114 220-351 42-157 (236)
319 1tl2_A L10, protein (tachylect 95.8 0.16 5.4E-06 40.5 11.2 63 219-291 135-202 (236)
320 3s25_A Hypothetical 7-bladed b 95.6 0.86 3E-05 38.6 17.5 106 225-365 110-222 (302)
321 1cru_A Protein (soluble quinop 95.1 1.9 6.4E-05 39.0 28.6 32 33-64 27-58 (454)
322 2vpj_A Kelch-like protein 12; 94.4 2 6.8E-05 36.1 20.2 23 278-301 159-186 (301)
323 2wg3_C Hedgehog-interacting pr 94.2 3.1 0.00011 37.6 17.6 60 219-278 14-79 (463)
324 3ii7_A Kelch-like protein 7; p 92.0 4.8 0.00017 33.7 21.0 23 278-301 200-227 (306)
325 3das_A Putative oxidoreductase 91.3 6.6 0.00022 33.9 26.2 34 32-65 31-64 (347)
326 3sbq_A Nitrous-oxide reductase 90.8 0.84 2.9E-05 41.8 8.1 80 219-299 323-408 (638)
327 2xn4_A Kelch-like protein 2; s 90.5 7 0.00024 32.7 20.6 23 278-301 155-184 (302)
328 1zgk_A Kelch-like ECH-associat 90.2 7.5 0.00026 32.6 18.8 64 229-301 168-242 (308)
329 3s25_A Hypothetical 7-bladed b 90.1 7.7 0.00026 32.7 21.5 105 225-366 151-262 (302)
330 2vpj_A Kelch-like protein 12; 89.5 8.3 0.00028 32.2 19.5 64 229-301 159-233 (301)
331 3ii7_A Kelch-like protein 7; p 89.5 8.4 0.00029 32.2 22.3 27 126-152 55-85 (306)
332 2uvk_A YJHT; unknown function, 89.5 9.4 0.00032 32.8 20.0 21 43-63 19-40 (357)
333 2xn4_A Kelch-like protein 2; s 89.5 8.3 0.00029 32.2 20.2 23 278-301 204-231 (302)
334 2be1_A Serine/threonine-protei 89.0 7.1 0.00024 33.5 12.2 26 230-256 111-137 (339)
335 1zgk_A Kelch-like ECH-associat 87.4 12 0.00041 31.4 22.4 23 278-301 168-195 (308)
336 2zwa_A Leucine carboxyl methyl 86.1 25 0.00084 33.7 18.0 28 125-152 499-528 (695)
337 2wg3_C Hedgehog-interacting pr 85.9 16 0.00056 32.9 13.3 29 269-298 15-44 (463)
338 3sbq_A Nitrous-oxide reductase 85.2 8.8 0.0003 35.4 10.9 77 269-357 324-408 (638)
339 4asc_A Kelch repeat and BTB do 85.1 16 0.00055 30.7 14.2 26 126-151 148-179 (315)
340 3f7f_A Nucleoporin NUP120; nuc 83.8 7.3 0.00025 37.1 10.2 83 114-204 222-306 (729)
341 2zwa_A Leucine carboxyl methyl 80.9 40 0.0014 32.2 22.2 69 229-301 500-579 (695)
342 4gq2_M Nucleoporin NUP120; bet 80.7 38 0.0013 33.8 14.7 33 269-302 237-269 (950)
343 4gq2_M Nucleoporin NUP120; bet 75.4 70 0.0024 32.0 15.3 39 220-259 237-276 (950)
344 3q6k_A 43.2 kDa salivary prote 75.4 41 0.0014 29.3 11.8 109 240-355 124-251 (381)
345 1bpo_A Protein (clathrin); cla 74.7 47 0.0016 29.7 20.1 75 218-301 258-333 (494)
346 3q6k_A 43.2 kDa salivary prote 74.5 43 0.0015 29.2 21.5 157 219-402 152-341 (381)
347 2uvk_A YJHT; unknown function, 72.3 45 0.0015 28.4 17.5 23 43-65 65-97 (357)
348 2xzh_A Clathrin heavy chain 1; 72.0 47 0.0016 28.4 25.6 35 266-301 258-292 (365)
349 4asc_A Kelch repeat and BTB do 70.1 47 0.0016 27.7 21.2 23 278-301 148-176 (315)
350 2woz_A Kelch repeat and BTB do 65.9 58 0.002 27.2 20.8 24 277-301 157-186 (318)
351 4a9v_A PHOX; hydrolase, beta-p 59.5 39 0.0013 31.3 8.4 60 328-402 476-548 (592)
352 1xi4_A Clathrin heavy chain; a 55.5 1.1E+02 0.0037 32.2 11.4 122 238-402 47-168 (1630)
353 3f7f_A Nucleoporin NUP120; nuc 53.9 1.6E+02 0.0053 28.3 13.8 31 269-302 223-253 (729)
354 2woz_A Kelch repeat and BTB do 52.7 99 0.0034 25.7 19.5 23 278-301 206-233 (318)
355 3ott_A Two-component system se 51.5 1.7E+02 0.0059 28.1 28.9 114 219-357 472-586 (758)
356 2be1_A Serine/threonine-protei 45.9 1E+02 0.0034 26.4 8.5 28 339-367 111-139 (339)
357 4fhn_B Nucleoporin NUP120; pro 43.0 1.3E+02 0.0043 30.9 10.1 40 220-260 239-279 (1139)
358 4fhn_B Nucleoporin NUP120; pro 40.7 24 0.00083 36.1 4.5 39 115-155 239-277 (1139)
359 3zwu_A Alkaline phosphatase PH 36.4 1.4E+02 0.0046 28.0 8.3 57 221-285 478-547 (592)
360 3zwu_A Alkaline phosphatase PH 36.3 1.3E+02 0.0046 28.0 8.3 20 217-236 529-548 (592)
361 4a9v_A PHOX; hydrolase, beta-p 31.9 2.5E+02 0.0087 26.1 9.1 58 220-286 477-548 (592)
362 3b7f_A Glycosyl hydrolase, BNR 23.7 3.5E+02 0.012 23.2 25.2 74 219-295 177-258 (394)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.2e-43 Score=308.10 Aligned_cols=280 Identities=17% Similarity=0.232 Sum_probs=232.7
Q ss_pred ccCCCcEEEEEECCC----CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccc
Q 015290 29 LQDVDIVSAIEFDKT----GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEF 104 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~----~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 104 (409)
.+|.+.|++++|+|+ +++||+|+.|++|+||++.+... .....+.+|.
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-------------------------~~~~~l~gh~--- 80 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-------------------------DLQWSLEGHQ--- 80 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-------------------------EEEEEECCCS---
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-------------------------eeeeeeccCC---
Confidence 359999999999984 67999999999999999976542 2345688999
Q ss_pred cccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 105 DYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 105 ~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
..|.+++| ++++.++++++.|++|++||+.+++........ ......+.+++++.+
T Consensus 81 ---------~~v~~~~~--~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~-------------~~~~~~~~~spdg~~ 136 (321)
T 3ow8_A 81 ---------LGVVSVDI--SHTLPIAASSSLDAHIRLWDLENGKQIKSIDAG-------------PVDAWTLAFSPDSQY 136 (321)
T ss_dssp ---------SCEEEEEE--CSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-------------TTCCCCEEECTTSSE
T ss_pred ---------CCEEEEEE--CCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCC-------------CccEEEEEECCCCCE
Confidence 89999999 789999999999999999999988766554322 122334555677777
Q ss_pred eecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcC
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM 263 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 263 (409)
++.+.. ++.+++|+++.. +....+ ..|...|.+++|+|++++|++| .|+.|++||++ .++.+.. +
T Consensus 137 l~~g~~--dg~v~i~~~~~~---~~~~~~-~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~-~~~~~~~-------~ 202 (321)
T 3ow8_A 137 LATGTH--VGKVNIFGVESG---KKEYSL-DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA-TGKLLHT-------L 202 (321)
T ss_dssp EEEECT--TSEEEEEETTTC---SEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEE-------E
T ss_pred EEEEcC--CCcEEEEEcCCC---ceeEEe-cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECC-CCcEEEE-------E
Confidence 777765 899999999864 333333 5788889999999999999999 99999999998 6776666 6
Q ss_pred cCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEE
Q 015290 264 DDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 343 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 343 (409)
.+|...|.+++|+|++ ++|++|+.|+.|++||++.++. ... +.+|...|.+++|+|++++|+
T Consensus 203 ~~h~~~v~~l~~spd~-~~l~s~s~dg~i~iwd~~~~~~----~~~-------------~~~h~~~v~~~~~sp~~~~l~ 264 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYDVQHANL----AGT-------------LSGHASWVLNVAFCPDDTHFV 264 (321)
T ss_dssp CCCSSCCCEEEECTTS-CEEEEECTTSCEEEEETTTCCE----EEE-------------ECCCSSCEEEEEECTTSSEEE
T ss_pred cccCCceeEEEEcCCC-CEEEEEcCCCeEEEEECCCcce----eEE-------------EcCCCCceEEEEECCCCCEEE
Confidence 7899999999999999 9999999999999999987653 122 344578899999999999999
Q ss_pred Eeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 344 SRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 344 sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+++. +.|++||+.+ ++++..+.+|...+ ++++|+|+|++|++++.||+|
T Consensus 265 s~s~D~~v~iwd~~~-~~~~~~~~~h~~~v---------------~~v~~s~~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGT-RTCVHTFFDHQDQV---------------WGVKYNGNGSKIVSVGDDQEI 314 (321)
T ss_dssp EEETTSCEEEEETTT-TEEEEEECCCSSCE---------------EEEEECTTSSEEEEEETTCCE
T ss_pred EEeCCCcEEEEeCCC-CEEEEEEcCCCCcE---------------EEEEECCCCCEEEEEeCCCeE
Confidence 9974 9999999986 88999999998876 699999999999999999986
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-42 Score=307.38 Aligned_cols=279 Identities=17% Similarity=0.247 Sum_probs=225.7
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|++++||+|+.||.|+|||..++. .+..+..|.
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~---------------------------~~~~~~~~~------- 97 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN---------------------------KVHAIPLRS------- 97 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC---------------------------EEEEEECSS-------
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC---------------------------cceEeecCC-------
Confidence 3599999999999999999999999999999998766 356678888
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCcee----eeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKV----KKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
..|.+++| +|++++|++++.|+.|++|++.++.. ...... ... .+..+.+.+++.
T Consensus 98 -----~~v~~~~~--s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~-h~~------------~v~~~~~~~~~~- 156 (340)
T 1got_B 98 -----SWVMTCAY--APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG-HTG------------YLSCCRFLDDNQ- 156 (340)
T ss_dssp -----SCEEEEEE--CTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEEC-CSS------------CEEEEEEEETTE-
T ss_pred -----ccEEEEEE--CCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecC-CCc------------cEEEEEECCCCc-
Confidence 89999999 79999999999999999999976532 111111 111 122222222223
Q ss_pred eecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcC
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM 263 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 263 (409)
+++++. |+.|++||+++ ++++..+ .+|...|.+++|+|+++++++| .|+.|++||++ .+..... +
T Consensus 157 l~s~s~--d~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~-~~~~~~~-------~ 222 (340)
T 1got_B 157 IVTSSG--DTTCALWDIET---GQQTTTF-TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGMCRQT-------F 222 (340)
T ss_dssp EEEEET--TSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCSEEEE-------E
T ss_pred EEEEEC--CCcEEEEECCC---CcEEEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeeEEE-------E
Confidence 333333 89999999976 4556665 7899999999999999999999 99999999998 6666665 6
Q ss_pred cCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEE
Q 015290 264 DDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 343 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 343 (409)
.+|...|++++|+|++ ++|++|+.||.|++||+++++.. ..+.. ..+...|.+++|+|+|++|+
T Consensus 223 ~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~----~~~~~-----------~~~~~~v~~~~~s~~g~~l~ 286 (340)
T 1got_B 223 TGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQEL----MTYSH-----------DNIICGITSVSFSKSGRLLL 286 (340)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE----EEECC-----------TTCCSCEEEEEECTTSSEEE
T ss_pred cCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCcEE----EEEcc-----------CCcccceEEEEECCCCCEEE
Confidence 7899999999999999 99999999999999999886531 22211 11234799999999999999
Q ss_pred Eeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 344 SRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 344 sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+|++ +.|++||+.+ ++.+..+.+|...+ .+++|+|||.+|++|+.||+|
T Consensus 287 ~g~~d~~i~vwd~~~-~~~~~~~~~h~~~v---------------~~~~~s~dg~~l~s~s~D~~i 336 (340)
T 1got_B 287 AGYDDFNCNVWDALK-ADRAGVLAGHDNRV---------------SCLGVTDDGMAVATGSWDSFL 336 (340)
T ss_dssp EEETTSEEEEEETTT-CCEEEEEECCSSCE---------------EEEEECTTSSCEEEEETTSCE
T ss_pred EECCCCeEEEEEccc-CcEeeEeecCCCcE---------------EEEEEcCCCCEEEEEcCCccE
Confidence 9975 9999999986 78889999999876 699999999999999999986
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5e-43 Score=318.98 Aligned_cols=279 Identities=16% Similarity=0.264 Sum_probs=237.3
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..+|.++|++++|+|++.+||+|+.||+|+|||+.+++. ...+.+|.
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~---------------------------~~~l~~h~------ 150 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF---------------------------ERTLKGHT------ 150 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC---------------------------CEEECCCS------
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE---------------------------EEEEeccC------
Confidence 346999999999999999999999999999999998763 56789999
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
+.|.+++| +|++++|++|+.|++|++||+.+++.......+ ...+..+.+++++.++++
T Consensus 151 ------~~V~~v~~--~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h-------------~~~V~~v~~~p~~~~l~s 209 (410)
T 1vyh_C 151 ------DSVQDISF--DHSGKLLASCSADMTIKLWDFQGFECIRTMHGH-------------DHNVSSVSIMPNGDHIVS 209 (410)
T ss_dssp ------SCEEEEEE--CTTSSEEEEEETTSCCCEEETTSSCEEECCCCC-------------SSCEEEEEECSSSSEEEE
T ss_pred ------CcEEEEEE--cCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCC-------------CCCEEEEEEeCCCCEEEE
Confidence 89999999 789999999999999999999887765543322 123444555666677777
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
++. |+.|++||+.+ +.++..+ .+|...|.+++++|+++++++| .|+.|++||+. .+..... +.+|
T Consensus 210 ~s~--D~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~-~~~~~~~-------~~~h 275 (410)
T 1vyh_C 210 ASR--DKTIKMWEVQT---GYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAE-------LREH 275 (410)
T ss_dssp EET--TSEEEEEETTT---CCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEE-------ECCC
T ss_pred EeC--CCeEEEEECCC---CcEEEEE-eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECC-CCceeeE-------ecCC
Confidence 665 99999999976 4566666 7899999999999999999999 99999999998 5666655 5789
Q ss_pred cCceEEEEEeCC--------------------CCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccc
Q 015290 267 TEVITSAEFHPI--------------------YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI 326 (409)
Q Consensus 267 ~~~v~~~~~~p~--------------------~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (409)
...|.+++|+|+ + .+|++|+.|+.|++||++++.. +..+ .+|
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~sgs~D~~i~iwd~~~~~~----~~~~-------------~~h 337 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMC----LMTL-------------VGH 337 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------C-CEEEEEETTSEEEEEETTTTEE----EEEE-------------ECC
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCC-CEEEEEeCCCeEEEEECCCCce----EEEE-------------ECC
Confidence 999999999996 4 6899999999999999998753 2222 345
Q ss_pred ccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 327 IASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 327 ~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
...|.+++|+|+|++|++|++ +.|++||+.. ++++..+.+|...+ ++++|+|++.+|++|+.|
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~-~~~~~~~~~h~~~v---------------~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFV---------------TSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTT-SCCCEEEECCSSCE---------------EEEEECSSSSCEEEEETT
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CceEEEEcCCCCcE---------------EEEEEcCCCCEEEEEeCC
Confidence 788999999999999999975 9999999986 88999999998876 699999999999999999
Q ss_pred CCC
Q 015290 406 RDN 408 (409)
Q Consensus 406 g~i 408 (409)
|+|
T Consensus 402 ~~i 404 (410)
T 1vyh_C 402 QTV 404 (410)
T ss_dssp SEE
T ss_pred CcE
Confidence 986
No 4
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=318.63 Aligned_cols=359 Identities=48% Similarity=0.852 Sum_probs=266.5
Q ss_pred hccccceeeehhccCCCCCccccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccC
Q 015290 8 ASASLEWKCSQAFGERNPDEELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTS 87 (409)
Q Consensus 8 ~~~~~~w~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (409)
...+..|++.|.|++ ...+++|.+.|++++|+|+|++||+|+.||.|+||++.+++.. ....
T Consensus 6 ~~~~~~w~~~q~~~~--~~~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~----------------~~~~ 67 (447)
T 3dw8_B 6 GGNDIQWCFSQVKGA--VDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKI----------------QSHS 67 (447)
T ss_dssp --CCCCCEEEECCSC--SSSCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC---------------------CCC
T ss_pred CCcceeEEEEEeccc--ccccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCC----------------Cccc
Confidence 346678999999988 4556778999999999999999999999999999999876521 0011
Q ss_pred CCceeeeeeecCCCccccccccceeccceEEEEEEecCCC--CEEEEEeCCCeEEEEEcCCceeeeeeccCCCccccccc
Q 015290 88 HPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWCAAPNG--SMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSEN 165 (409)
Q Consensus 88 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~~s~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 165 (409)
..++++...+.+|..+|+++..+.+++.|.+++| +|++ .+|++++.|++|++||+.++....... ....
T Consensus 68 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~--~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~-~~~~------ 138 (447)
T 3dw8_B 68 RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW--LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGY-NLKE------ 138 (447)
T ss_dssp CCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE--CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECC-SCC-------
T ss_pred ccceeEecccccccccccccccccccCceEEEEE--cCCCCcceEEEeCCCCeEEEEecccccCCccee-cccC------
Confidence 2356678889999999999999999999999999 5776 799999999999999998765432110 0000
Q ss_pred ccccccCceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEE
Q 015290 166 TLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWN 245 (409)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd 245 (409)
..+......... ...++... ..-|. ....+.+.+..+|...|.+++|+|++++|++|.|+.|++||
T Consensus 139 ---~~g~~~~~~~~~-~~~~~~~~------~~~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd 204 (447)
T 3dw8_B 139 ---EDGRYRDPTTVT-TLRVPVFR------PMDLM----VEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLWH 204 (447)
T ss_dssp ----------CCCCC-SCCCCEEE------EEEEE----EEEEEEEEECSCCSSCCCEEEECTTSSEEEEECSSEEEEEE
T ss_pred ---ccccccCccccc-ceEecccc------chhee----eeccceEEeccCCCcceEEEEEcCCCCEEEEeCCCeEEEEE
Confidence 000000000000 00000000 00010 11234445557899999999999999999999999999999
Q ss_pred ccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccc
Q 015290 246 LEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTE 325 (409)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (409)
++..+..+..+..++..+.+|...|++++|+|+++++|++|+.||.|++||+++++.+......+..| ..+.....+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 283 (447)
T 3dw8_B 205 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP-EDPSNRSFFSE 283 (447)
T ss_dssp TTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC------CCHHHH
T ss_pred CCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC-CCccccccccc
Confidence 98556666666666666788999999999999976899999999999999999877543334555552 33344455667
Q ss_pred cccceeeeEeccCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 326 IIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 326 ~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
|...|.+++|+|+|++|++++++.|++||++..++++..+.+|...+..++..++.++++.++.++|+|++++|++|+.|
T Consensus 284 ~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d 363 (447)
T 3dw8_B 284 IISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN 363 (447)
T ss_dssp HTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST
T ss_pred cCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC
Confidence 77899999999999999999779999999986578899999998877666677777888777789999999999999999
Q ss_pred CCC
Q 015290 406 RDN 408 (409)
Q Consensus 406 g~i 408 (409)
|.|
T Consensus 364 g~v 366 (447)
T 3dw8_B 364 NFF 366 (447)
T ss_dssp TEE
T ss_pred CEE
Confidence 976
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-41 Score=297.38 Aligned_cols=278 Identities=15% Similarity=0.158 Sum_probs=226.9
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|.+.|++++|+|++++||+|+.||.|+|||+.++. .+..+.+|.
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~---------------------------~~~~~~~~~-------- 55 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV---------------------------EVRSIQVTE-------- 55 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---------------------------EEEEEECCS--------
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---------------------------eeEEeeccC--------
Confidence 389999999999999999999999999999998765 466788888
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
.+|.+++| ++++++|++++.|++|++||+.+++.......+ ...+..+.+++++.++++++
T Consensus 56 ----~~v~~~~~--~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~l~sgs 116 (304)
T 2ynn_A 56 ----TPVRAGKF--IARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-------------PDYIRSIAVHPTKPYVLSGS 116 (304)
T ss_dssp ----SCEEEEEE--EGGGTEEEEEETTSEEEEEETTTCCEEEEEECC-------------SSCEEEEEECSSSSEEEEEE
T ss_pred ----CcEEEEEE--eCCCCEEEEECCCCEEEEEECCCCcEEEEEeCC-------------CCcEEEEEEcCCCCEEEEEC
Confidence 89999999 689999999999999999999988776554322 22344555666777777776
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
. |+.|++||++... .+...+ .+|...|.+++|+| ++..|++| .|++|++||++ .......+ ..+|.
T Consensus 117 ~--D~~v~lWd~~~~~--~~~~~~-~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~-~~~~~~~~------~~~~~ 184 (304)
T 2ynn_A 117 D--DLTVKLWNWENNW--ALEQTF-EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG-QSTPNFTL------TTGQE 184 (304)
T ss_dssp T--TSCEEEEEGGGTT--EEEEEE-CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT-CSSCSEEE------ECCCT
T ss_pred C--CCeEEEEECCCCc--chhhhh-cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC-CCCcccee------ccCCc
Confidence 5 9999999997532 233444 88999999999999 57899999 99999999998 33333222 34566
Q ss_pred CceEEEEEeC--CCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 268 EVITSAEFHP--IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 268 ~~v~~~~~~p--~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
..+..+.|+| ++ .+|++|+.|+.|++||+++++. +..+ .+|...|.+++|+|++++|++|
T Consensus 185 ~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~~~~----~~~~-------------~~h~~~v~~~~~~p~~~~l~s~ 246 (304)
T 2ynn_A 185 RGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKSC----VATL-------------EGHMSNVSFAVFHPTLPIIISG 246 (304)
T ss_dssp TCEEEEEECCSTTC-CEEEEEETTSEEEEEETTTTEE----EEEE-------------ECCSSCEEEEEECSSSSEEEEE
T ss_pred CcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCCCcc----ceee-------------CCCCCCEEEEEECCCCCEEEEE
Confidence 7899999987 55 7999999999999999988653 2333 4457889999999999999999
Q ss_pred ec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC--eEEEcccCCC
Q 015290 346 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL--HFATGSYRRD 407 (409)
Q Consensus 346 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~--~l~s~s~dg~ 407 (409)
+. +.|++||+.+ ++++..+..|...+ ++++|+|++. +|++|+.||.
T Consensus 247 s~Dg~i~iWd~~~-~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~asg~~~g~ 295 (304)
T 2ynn_A 247 SEDGTLKIWNSST-YKVEKTLNVGLERS---------------WCIATHPTGRKNYIASGFDNGF 295 (304)
T ss_dssp ETTSCEEEEETTT-CCEEEEECCSSSSE---------------EEEEECTTCGGGCEEEEETTEE
T ss_pred cCCCeEEEEECCC-CceeeeccCCCccE---------------EEEEECCCCCceEEEEecCCce
Confidence 84 9999999986 88899998887765 6999999875 6899998875
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3e-41 Score=301.17 Aligned_cols=286 Identities=17% Similarity=0.263 Sum_probs=229.0
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|++++||+|+.||+|+|||..++. ....+..|.
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~---------------------------~~~~~~~~~------- 106 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN---------------------------KEHAVTMPC------- 106 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---------------------------EEEEEECSS-------
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC---------------------------cceEEecCC-------
Confidence 4599999999999999999999999999999988765 345566777
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+++| +|++.+|++++.|+.+++|++.......... ...........+..+.++++...++++
T Consensus 107 -----~~v~~~~~--sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~t~ 172 (354)
T 2pbi_B 107 -----TWVMACAY--APSGCAIACGGLDNKCSVYPLTFDKNENMAA-------KKKSVAMHTNYLSACSFTNSDMQILTA 172 (354)
T ss_dssp -----SCCCEEEE--CTTSSEEEEESTTSEEEEEECCCCTTCCSGG-------GCEEEEECSSCEEEEEECSSSSEEEEE
T ss_pred -----CCEEEEEE--CCCCCEEEEeeCCCCEEEEEEeccccccccc-------cceeeeccCCcEEEEEEeCCCCEEEEE
Confidence 78999999 7999999999999999999986432110000 000001122334455566666667766
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCC--CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS--DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
+. |+.|++||+++ ++++..+ .+|...|.+++++| ++++|++| .|+.|++||++ .+.++.. +.+
T Consensus 173 s~--D~~v~lwd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~-~~~~~~~-------~~~ 238 (354)
T 2pbi_B 173 SG--DGTCALWDVES---GQLLQSF-HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR-SGQCVQA-------FET 238 (354)
T ss_dssp ET--TSEEEEEETTT---CCEEEEE-ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT-TCCEEEE-------ECC
T ss_pred eC--CCcEEEEeCCC---CeEEEEE-cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC-CCcEEEE-------ecC
Confidence 65 99999999976 4566666 78999999999987 46899999 99999999999 6666666 678
Q ss_pred ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 266 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
|...|++++|+|++ .+|++|+.|++|++||++.++. ...+.. ..+...+.+++|+|+|++|++|
T Consensus 239 h~~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~~~~----~~~~~~-----------~~~~~~~~~~~~s~~g~~l~~g 302 (354)
T 2pbi_B 239 HESDVNSVRYYPSG-DAFASGSDDATCRLYDLRADRE----VAIYSK-----------ESIIFGASSVDFSLSGRLLFAG 302 (354)
T ss_dssp CSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE----EEEECC-----------TTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcE----EEEEcC-----------CCcccceeEEEEeCCCCEEEEE
Confidence 99999999999999 9999999999999999988653 122222 0113468899999999999999
Q ss_pred ec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 346 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 346 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+. +.|++||+.+ ++.+..+.+|...+ ++++|+|||++|++|+.||+|
T Consensus 303 ~~d~~i~vwd~~~-~~~~~~l~~h~~~v---------------~~l~~spdg~~l~sgs~D~~v 350 (354)
T 2pbi_B 303 YNDYTINVWDVLK-GSRVSILFGHENRV---------------STLRVSPDGTAFCSGSWDHTL 350 (354)
T ss_dssp ETTSCEEEEETTT-CSEEEEECCCSSCE---------------EEEEECTTSSCEEEEETTSEE
T ss_pred ECCCcEEEEECCC-CceEEEEECCCCcE---------------EEEEECCCCCEEEEEcCCCCE
Confidence 75 9999999986 78888999998876 699999999999999999976
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.4e-40 Score=291.20 Aligned_cols=288 Identities=14% Similarity=0.147 Sum_probs=227.0
Q ss_pred cCCCcEEEEEECCCC-CEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 30 QDVDIVSAIEFDKTG-DYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~-~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
+|.+.|++++|+|++ ++|++|+.|++|++|++.+.... ...++..+.+|.
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~----------------------~~~~~~~~~~h~------- 65 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK----------------------FGVPVRSFKGHS------- 65 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE----------------------EEEEEEEEECCS-------
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc----------------------ccccceEEeCCc-------
Confidence 499999999999965 89999999999999998754320 123467789999
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+++| ++++++|++++.|++|++||+.+++.......+ ...+..+.+++...+++++
T Consensus 66 -----~~v~~~~~--s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~l~s~ 125 (319)
T 3frx_A 66 -----HIVQDCTL--TADGAYALSASWDKTLRLWDVATGETYQRFVGH-------------KSDVMSVDIDKKASMIISG 125 (319)
T ss_dssp -----SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-------------SSCEEEEEECTTSCEEEEE
T ss_pred -----ccEEEEEE--CCCCCEEEEEeCCCEEEEEECCCCCeeEEEccC-------------CCcEEEEEEcCCCCEEEEE
Confidence 89999999 799999999999999999999998776554322 2234445556667777777
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC------CCeEEEe-cCCeEEEEEccCCCceeeeeecCCC
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD------CETFVSA-DDLRINLWNLEISDQCFNIVDMKPS 261 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~------~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~ 261 (409)
+. |+.|++||++. +++..+ .+|...|.+++++|. +..++++ .|+.|++||++ .......
T Consensus 126 s~--D~~i~vwd~~~----~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~------ 191 (319)
T 3frx_A 126 SR--DKTIKVWTIKG----QCLATL-LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLN-QFQIEAD------ 191 (319)
T ss_dssp ET--TSCEEEEETTS----CEEEEE-CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETT-TTEEEEE------
T ss_pred eC--CCeEEEEECCC----CeEEEE-eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECC-cchhhee------
Confidence 66 99999999964 455555 789999999999985 4478998 99999999998 5555544
Q ss_pred cCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCE
Q 015290 262 NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH 341 (409)
Q Consensus 262 ~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 341 (409)
+.+|...|.+++|+|++ ++|++++.||.|++||+++++. +..+.. ...+.+++|+|++.+
T Consensus 192 -~~~h~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~~~~----~~~~~~--------------~~~v~~~~~sp~~~~ 251 (319)
T 3frx_A 192 -FIGHNSNINTLTASPDG-TLIASAGKDGEIMLWNLAAKKA----MYTLSA--------------QDEVFSLAFSPNRYW 251 (319)
T ss_dssp -ECCCCSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEE----EEEEEC--------------CSCEEEEEECSSSSE
T ss_pred -ecCCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE----EEEecC--------------CCcEEEEEEcCCCCE
Confidence 67899999999999999 9999999999999999998753 233333 357999999999999
Q ss_pred EEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 342 LLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 342 l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
|++++++.+++|++.. ...+..+..+..... ......+.+++|+|||++|++|+.||+|
T Consensus 252 la~~~~~~i~v~~~~~-~~~~~~~~~~~~~~~-------~~~~~~v~~~~~spdg~~l~sg~~Dg~i 310 (319)
T 3frx_A 252 LAAATATGIKVFSLDP-QYLVDDLRPEFAGYS-------KAAEPHAVSLAWSADGQTLFAGYTDNVI 310 (319)
T ss_dssp EEEEETTEEEEEEETT-EEEEEEECCCCTTCC-------GGGCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEcCCCcEEEEeCc-CeeeeccCccccccc-------cCcCcceeEEEECCCCCEEEEeecCceE
Confidence 9999888899999975 555555543322110 0001123689999999999999999986
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5e-41 Score=302.86 Aligned_cols=297 Identities=18% Similarity=0.260 Sum_probs=224.1
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|++++||+|+.||+|+|||..+++ ....+.+|.
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~---------------------------~~~~~~~h~------- 108 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ---------------------------KTHAIKLHC------- 108 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE---------------------------EEEEEECCC-------
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---------------------------cceEEecCC-------
Confidence 3599999999999999999999999999999998766 356788898
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCC-Cceeec
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPS-FAHGYH 187 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 187 (409)
..|.+++| +|++++|++++.|+.|++|++......... ... ...+....+.+..+.+.+. ...+++
T Consensus 109 -----~~v~~~~~--s~~g~~las~~~d~~v~iw~~~~~~~~~~~-~~~-----~~~~~gh~~~v~~~~~~~~~~~~l~s 175 (380)
T 3iz6_a 109 -----PWVMECAF--APNGQSVACGGLDSACSIFNLSSQADRDGN-MPV-----SRVLTGHKGYASSCQYVPDQETRLIT 175 (380)
T ss_dssp -----TTCCCCEE--CTTSSEEEECCSSSCCEEEECCCCSSCCCS-STT-----CCBCCCCSSCCCCCBCCSSSSSCEEE
T ss_pred -----CCEEEEEE--CCCCCEEEEeeCCCcEEEEECCCCccccCC-ccc-----eeeccCCCcceEEEEEecCCCCEEEE
Confidence 88999999 799999999999999999999754211000 000 0000111122333333433 334555
Q ss_pred ccccccceeEEEecCCcccceeee-eeccccccceeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQK-VYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
++. |+.|++||+.+........ .+..+|...|.+++|++ +++++++| .|+.|++||++.....+.. +.
T Consensus 176 ~s~--D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~-------~~ 246 (380)
T 3iz6_a 176 GSG--DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT-------YH 246 (380)
T ss_dssp ECT--TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE-------EC
T ss_pred ECC--CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE-------EC
Confidence 554 9999999998743322211 11257889999999987 78899999 9999999999855555555 67
Q ss_pred CccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 344 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 344 (409)
+|...|++++|+|++ ++|++|+.||+|++||+++++. ...+..+... ...+...+.+++|+|+|++|++
T Consensus 247 ~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~~~~~~----~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 247 GHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDMRTGHQ----LQVYNREPDR------NDNELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp CCSSCCCEEEECTTS-SEEEEECSSSCEEEEETTTTEE----EEEECCCCSS------SCCSSCSCSEEEECSSSSEEEE
T ss_pred CcCCCeEEEEEecCC-CeEEEEcCCCeEEEEECCCCcE----EEEecccccc------cccccCceEEEEECCCCCEEEE
Confidence 899999999999999 9999999999999999998764 2333321100 1112346899999999999999
Q ss_pred eec-CeEEEEEccCCCcceEEE----ecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 345 RDY-MNLKLWDIRMDSTPVATF----KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 345 g~~-~~v~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
|+. +.|++||+.. ++.+..+ .+|...+ .+++|+|||++|++|+.||+|
T Consensus 316 g~~dg~i~vwd~~~-~~~~~~~~~~~~~h~~~v---------------~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 316 GYSNGDCYVWDTLL-AEMVLNLGTLQNSHEGRI---------------SCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp ECTTSCEEEEETTT-CCEEEEECCSCSSCCCCC---------------CEEEECSSSSEEEEECTTSCE
T ss_pred EECCCCEEEEECCC-CceEEEEecccCCCCCce---------------EEEEECCCCCEEEEeeCCCCE
Confidence 975 9999999975 6776666 4666665 699999999999999999986
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7e-41 Score=299.00 Aligned_cols=287 Identities=16% Similarity=0.243 Sum_probs=213.0
Q ss_pred ccCCCcEEEEEECCCCCEEEEEec------CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDR------GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEP 102 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 102 (409)
..|...|++++|+|||++||+|+. |+.|++|+..++.. .........+|.
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~-----------------------~~~~~~~~~~~~- 94 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP-----------------------NESLCTAGVQTE- 94 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC--------------------------CGGGCSEEEECS-
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCc-----------------------ceeEecccCCCC-
Confidence 459999999999999999999997 77899998876542 111223344566
Q ss_pred cccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC
Q 015290 103 EFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 182 (409)
Q Consensus 103 ~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (409)
..|.+++| +|++ .+++++.|++|++||+.+++........ .......+..+.+++++
T Consensus 95 -----------~~V~~~~~--s~d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~---------~~~h~~~V~~v~~spdg 151 (357)
T 4g56_B 95 -----------AGVTDVAW--VSEK-GILVASDSGAVELWEILEKESLLVNKFA---------KYEHDDIVKTLSVFSDG 151 (357)
T ss_dssp -----------SCEEEEEE--ETTT-EEEEEETTSCEEEC--------CCCCEE---------ECCCSSCEEEEEECSSS
T ss_pred -----------CCEEEEEE--cCCC-CEEEEECCCEEEEeeccccceeEEEeec---------cCCCCCCEEEEEECCCC
Confidence 78999999 6777 5667889999999999887654332210 00112334455566777
Q ss_pred ceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCC-eEEEe-cCCeEEEEEccCCCceeeeeecCC
Q 015290 183 AHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
.++++++. ++.|++||+++ .+++..+ .+|...|++++|+|++. .++++ .|+.|++||++ .++....+
T Consensus 152 ~~l~sgs~--dg~v~iwd~~~---~~~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~-~~~~~~~~---- 220 (357)
T 4g56_B 152 TQAVSGGK--DFSVKVWDLSQ---KAVLKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR-KPKPATRI---- 220 (357)
T ss_dssp SEEEEEET--TSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT-SSSCBCBC----
T ss_pred CEEEEEeC--CCeEEEEECCC---CcEEEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECC-CCceeeee----
Confidence 77777765 89999999976 4566666 78999999999999875 67788 99999999998 44444331
Q ss_pred CcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCC-
Q 015290 261 SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG- 339 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g- 339 (409)
....|...+.+++|+|++..+|++|+.|+.|++||+++++. ...+ .+|...|++++|+|++
T Consensus 221 -~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~----~~~~-------------~~~~~~v~~l~~sp~~~ 282 (357)
T 4g56_B 221 -DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS----AQTS-------------AVHSQNITGLAYSYHSS 282 (357)
T ss_dssp -CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG----CEEE-------------CCCSSCEEEEEECSSSS
T ss_pred -eeccccccccchhhhhcccceEEEeecccceeEEECCCCcE----eEEE-------------eccceeEEEEEEcCCCC
Confidence 24567788999999998758999999999999999988653 2333 3456789999999997
Q ss_pred CEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcC-CCCeEEEcccCCCC
Q 015290 340 QHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFATGSYRRDN 408 (409)
Q Consensus 340 ~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~s~s~dg~i 408 (409)
++||+|+ |++|+|||+++ ++++.. .+|...+ ++++|+| |+++|++|+.||+|
T Consensus 283 ~~lasgs~D~~i~iwd~~~-~~~~~~-~~H~~~V---------------~~vafsP~d~~~l~s~s~Dg~v 336 (357)
T 4g56_B 283 PFLASISEDCTVAVLDADF-SEVFRD-LSHRDFV---------------TGVAWSPLDHSKFTTVGWDHKV 336 (357)
T ss_dssp CCEEEEETTSCEEEECTTS-CEEEEE-CCCSSCE---------------EEEEECSSSTTEEEEEETTSCE
T ss_pred CEEEEEeCCCEEEEEECCC-CcEeEE-CCCCCCE---------------EEEEEeCCCCCEEEEEcCCCeE
Confidence 6888887 49999999986 666554 4687765 6999999 89999999999986
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=294.91 Aligned_cols=300 Identities=16% Similarity=0.156 Sum_probs=223.3
Q ss_pred CCC-cEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 31 DVD-IVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 31 h~~-~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
|.+ .|.+++|+|+|++||+|+.|++|+|||+.++... .......+|.
T Consensus 14 h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~------------------------~~~~~~~~h~-------- 61 (345)
T 3fm0_A 14 HPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI------------------------CKSVLSEGHQ-------- 61 (345)
T ss_dssp STTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE------------------------EEEEECSSCS--------
T ss_pred CCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce------------------------eeeeeccccC--------
Confidence 766 9999999999999999999999999999876420 0112346888
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
..|.+++| +|++++|++++.|++|++|++..+.......+. .....+..+.+++++.++++++
T Consensus 62 ----~~v~~~~~--sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-----------~h~~~v~~v~~sp~~~~l~s~s 124 (345)
T 3fm0_A 62 ----RTVRKVAW--SPCGNYLASASFDATTCIWKKNQDDFECVTTLE-----------GHENEVKSVAWAPSGNLLATCS 124 (345)
T ss_dssp ----SCEEEEEE--CTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC-----------CCSSCEEEEEECTTSSEEEEEE
T ss_pred ----CcEEEEEE--CCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc-----------CCCCCceEEEEeCCCCEEEEEE
Confidence 89999999 799999999999999999999876543322211 1123345556677777888777
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccC
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 268 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 268 (409)
. |+.|++||+.......++..+ .+|...|.+++|+|++++|++| .|+.|++||.+ .+..... ..+.+|..
T Consensus 125 ~--D~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~-~~~~~~~-----~~~~~h~~ 195 (345)
T 3fm0_A 125 R--DKSVWVWEVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLASASYDDTVKLYREE-EDDWVCC-----ATLEGHES 195 (345)
T ss_dssp T--TSCEEEEEECTTSCEEEEEEE-CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE-TTEEEEE-----EEECCCSS
T ss_pred C--CCeEEEEECCCCCCeEEEEEe-cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec-CCCEEEE-----EEecCCCC
Confidence 6 999999999876666666666 8899999999999999999999 99999999998 4432211 11678999
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcccccccccccccccccc--CCccccc-ccccceeeeEeccCCCEEEEe
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESH--GSKSFFT-EIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~i~~~~~s~~g~~l~sg 345 (409)
.|++++|+|++ ++|++++.|++|++||....... .........+ .....+. .|...|.+++|+|++.+|+++
T Consensus 196 ~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~ 270 (345)
T 3fm0_A 196 TVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGNE----QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATA 270 (345)
T ss_dssp CEEEEEECTTS-SEEEEEETTSCEEEEEEECTTCT----TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEE
T ss_pred ceEEEEECCCC-CEEEEEeCCCeEEEeccccCCCC----ccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEE
Confidence 99999999999 99999999999999997543211 0000000000 0001122 267889999999999999998
Q ss_pred e-cCeEEEEEccCCC---cceEE-----EecccCcccccccccCCCCccceeeEEEcCCC-CeEEEcccCCCC
Q 015290 346 D-YMNLKLWDIRMDS---TPVAT-----FKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG-LHFATGSYRRDN 408 (409)
Q Consensus 346 ~-~~~v~iwd~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~l~s~s~dg~i 408 (409)
+ |+.|++|+..... .+... ..+|...+ .+++|+|++ .+||+|+.||+|
T Consensus 271 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V---------------~~v~~~p~~~~~laS~s~Dg~v 328 (345)
T 3fm0_A 271 CGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDV---------------NCVAWNPKEPGLLASCSDDGEV 328 (345)
T ss_dssp ETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCE---------------EEEEECSSSTTEEEEEETTSCE
T ss_pred eCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcE---------------eEeEEeCCCceEEEEcCCCCcE
Confidence 7 5999999986421 11111 23455544 699999998 499999999986
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.7e-39 Score=288.83 Aligned_cols=294 Identities=14% Similarity=0.116 Sum_probs=219.2
Q ss_pred cCCCcEEEEEE-----CC-CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcc
Q 015290 30 QDVDIVSAIEF-----DK-TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPE 103 (409)
Q Consensus 30 ~h~~~v~~v~~-----~~-~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 103 (409)
+|.+.|++++| ++ ++++||+|+.|++|+|||+...+.. .........+.+|.
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~--------------------~~~~~~~~~l~~h~-- 76 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQN--------------------GYFGIPHKALTGHN-- 76 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCS--------------------SBSEEEEEEECCCS--
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcc--------------------cccccccchhccCC--
Confidence 39999999999 77 9999999999999999999765421 00113456788999
Q ss_pred ccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCc
Q 015290 104 FDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA 183 (409)
Q Consensus 104 ~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (409)
..|.+++| +|++.++++++.|++|++||+.+++.......+ ...+..+.+++++.
T Consensus 77 ----------~~V~~~~~--~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h-------------~~~v~~v~~sp~~~ 131 (343)
T 2xzm_R 77 ----------HFVSDLAL--SQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH-------------QSEVYSVAFSPDNR 131 (343)
T ss_dssp ----------SCEEEEEE--CSSTTEEEEEETTSEEEEEETTSSCEEEEEECC-------------CSCEEEEEECSSTT
T ss_pred ----------CceEEEEE--CCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC-------------CCcEEEEEECCCCC
Confidence 89999999 789999999999999999999988765544322 23345556667777
Q ss_pred eeecccccccceeEEEecCCcccceeeeee--ccccccceeEEEeCCCC----------CeEEEe-cCCeEEEEEccCCC
Q 015290 184 HGYHLEWTENMATKIANVGNSVHARCQKVY--PHAHDFNINSISNNSDC----------ETFVSA-DDLRINLWNLEISD 250 (409)
Q Consensus 184 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~v~~l~~~~~~----------~~l~~~-~d~~i~lwd~~~~~ 250 (409)
.+++++. |+.|++||+... +.... ..+|...|.+++|+|++ .+++++ .|+.|++||.. .
T Consensus 132 ~l~s~~~--d~~i~~wd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~ 203 (343)
T 2xzm_R 132 QILSAGA--EREIKLWNILGE----CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--F 203 (343)
T ss_dssp EEEEEET--TSCEEEEESSSC----EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--T
T ss_pred EEEEEcC--CCEEEEEeccCC----ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--C
Confidence 7777765 999999999742 22111 13788899999999987 689999 99999999954 4
Q ss_pred ceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccce
Q 015290 251 QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 330 (409)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 330 (409)
..... +.+|...|.+++|+|++ ++|++|+.||.|++||++..... ...+.. ...|
T Consensus 204 ~~~~~-------~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~~~~~~---~~~~~~--------------~~~v 258 (343)
T 2xzm_R 204 QIRYT-------FKAHESNVNHLSISPNG-KYIATGGKDKKLLIWDILNLTYP---QREFDA--------------GSTI 258 (343)
T ss_dssp EEEEE-------EECCSSCEEEEEECTTS-SEEEEEETTCEEEEEESSCCSSC---SEEEEC--------------SSCE
T ss_pred ceeEE-------EcCccccceEEEECCCC-CEEEEEcCCCeEEEEECCCCccc---ceeecC--------------CCcE
Confidence 44444 57899999999999999 99999999999999999543221 111211 3469
Q ss_pred eeeEeccCCCEEEEeecCeEEEEEccCCCcceE--EEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 331 SDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVA--TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 331 ~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
.+++|+|+++++++++++.|++||+.+ ++... .+..+.. ...... ......|.+++|+|+|++|++|+.||+|
T Consensus 259 ~~v~~sp~~~~la~~~d~~v~iw~~~~-~~~~~~~~~~~~~~--~~~~~~--~~~~~~v~~~~~sp~g~~l~sg~~Dg~v 333 (343)
T 2xzm_R 259 NQIAFNPKLQWVAVGTDQGVKIFNLMT-QSKAPVCTIEAEPI--TKAEGQ--KGKNPQCTSLAWNALGKKLFAGFTDGVI 333 (343)
T ss_dssp EEEEECSSSCEEEEEESSCEEEEESSS-CCSCSEEECCCCSG--GGBTTB--CCSCCCEEEEEECSSSCCEEEEETTSEE
T ss_pred EEEEECCCCCEEEEECCCCEEEEEeCC-CCCCceEEeecCcc--hhhhhh--cCCCCceEEEEECCCCCeEEEecCCceE
Confidence 999999999999988888999999975 44332 3331110 000000 0001123699999999999999999976
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=291.63 Aligned_cols=294 Identities=13% Similarity=0.162 Sum_probs=213.8
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
+..|...|.+++|+|||++|++++ |+++++||....... .....+... ...
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~---------------------------~~~~~~~~~-~~~ 76 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFK---------------------------DPCAAPNEG-FCS 76 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEES---------------------------SGGGTTCGG-GCS
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeec---------------------------cccccCCcc-eee
Confidence 345778899999999999999887 778888874321100 000000000 001
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
....++..|.+++| ++++ .|++++.||+|+|||+.+++......... ....+.+..+.+++++.++++
T Consensus 77 ~~~~~~~~v~~~~~--s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~---------~~H~~~V~~v~~spdg~~l~s 144 (344)
T 4gqb_B 77 AGVQTEAGVADLTW--VGER-GILVASDSGAVELWELDENETLIVSKFCK---------YEHDDIVSTVSVLSSGTQAVS 144 (344)
T ss_dssp EEEEESSCEEEEEE--ETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEE---------ECCSSCEEEEEECTTSSEEEE
T ss_pred eeeccCCCEEEEEE--eCCC-eEEEEECCCEEEEEeccCCCceeEeeccc---------cCCCCCEEEEEECCCCCEEEE
Confidence 11223378999999 5775 78999999999999999886544332110 011233445556777788887
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCC-eEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
++. |+.|++||+++ ++++..+ .+|...|.+++|+|++. .|+++ .|++|++||++ .++....+. ...
T Consensus 145 gs~--d~~i~iwd~~~---~~~~~~~-~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~-~~~~~~~~~-----~~~ 212 (344)
T 4gqb_B 145 GSK--DICIKVWDLAQ---QVVLSSY-RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR-CPKPASQIG-----CSA 212 (344)
T ss_dssp EET--TSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT-SSSCEEECC--------
T ss_pred EeC--CCeEEEEECCC---CcEEEEE-cCcCCceEEEEecCCCCCceeeecccccccccccc-ccceeeeee-----cce
Confidence 776 99999999976 5667766 89999999999999985 67888 99999999999 555555421 344
Q ss_pred ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCC-CEEEE
Q 015290 266 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG-QHLLS 344 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~s 344 (409)
+...+.+++|+|++.++|++|+.||.|++||+++++. +..+ .+|...|++++|+|++ ++|++
T Consensus 213 ~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~----~~~~-------------~~h~~~v~~v~fsp~g~~~las 275 (344)
T 4gqb_B 213 PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC----VLSS-------------AVHSQCVTGLVFSPHSVPFLAS 275 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C----CEEE-------------ECCSSCEEEEEECSSSSCCEEE
T ss_pred eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE----EEEE-------------cCCCCCEEEEEEccCCCeEEEE
Confidence 5667999999997658999999999999999998753 2333 4457899999999998 58899
Q ss_pred ee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC-eEEEcccCCCC
Q 015290 345 RD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGSYRRDN 408 (409)
Q Consensus 345 g~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~s~s~dg~i 408 (409)
|+ |++|+|||+++ ++ +..+.+|...+ ++++|+|+++ +|++||.||+|
T Consensus 276 gs~D~~i~vwd~~~-~~-~~~~~~H~~~V---------------~~v~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 276 LSEDCSLAVLDSSL-SE-LFRSQAHRDFV---------------RDATWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp EETTSCEEEECTTC-CE-EEEECCCSSCE---------------EEEEECSSSTTEEEEEETTSCE
T ss_pred EeCCCeEEEEECCC-Cc-EEEEcCCCCCE---------------EEEEEeCCCCeEEEEEcCCCeE
Confidence 87 59999999985 54 45678888876 6999999987 56799999986
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.4e-39 Score=281.06 Aligned_cols=281 Identities=17% Similarity=0.299 Sum_probs=225.6
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|.+.|++++|+|++++||+|+.||.|++|+..+++ ....+.+|.
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~---------------------------~~~~~~~h~-------- 65 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---------------------------FEKTISGHK-------- 65 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---------------------------EEEEECCCS--------
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc---------------------------cchhhccCC--------
Confidence 389999999999999999999999999999998765 456788898
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
..|.+++| +|++++|++++.|+.|++||+.+++.......+ ...+..+.+++...++++++
T Consensus 66 ----~~v~~~~~--~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~s~~ 126 (312)
T 4ery_A 66 ----LGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH-------------SNYVFCCNFNPQSNLIVSGS 126 (312)
T ss_dssp ----SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTCCEEEEEECC-------------SSCEEEEEECSSSSEEEEEE
T ss_pred ----CceEEEEE--cCCCCEEEEECCCCEEEEEECCCCcEEEEEcCC-------------CCCEEEEEEcCCCCEEEEEe
Confidence 89999999 799999999999999999999988766554322 22334445566667777776
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccC
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 268 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 268 (409)
. ++.|++||+++ .+++..+ ..|...|.+++|+|++++|+++ .|+.|++||++ .++.+..+ ...+..
T Consensus 127 ~--d~~i~iwd~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~------~~~~~~ 193 (312)
T 4ery_A 127 F--DESVRIWDVKT---GKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-SGQCLKTL------IDDDNP 193 (312)
T ss_dssp T--TSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEEE------CCSSCC
T ss_pred C--CCcEEEEECCC---CEEEEEe-cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCceeeEE------eccCCC
Confidence 5 89999999976 3455555 7899999999999999999999 99999999998 55555543 345667
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY- 347 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~- 347 (409)
.+..++|+|++ ++|++++.|+.|++||+++++. ...+..|... ...+......+++++|++|+.
T Consensus 194 ~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~----------~~~~~~~~~~~~~~~l~sg~~d 258 (312)
T 4ery_A 194 PVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKC----LKTYTGHKNE----------KYCIFANFSVTGGKWIVSGSED 258 (312)
T ss_dssp CEEEEEECTTS-SEEEEEETTTEEEEEETTTTEE----EEEECSSCCS----------SSCCCEEEECSSSCEEEECCTT
T ss_pred ceEEEEECCCC-CEEEEEcCCCeEEEEECCCCcE----EEEEEecCCc----------eEEEEEEEEeCCCcEEEEECCC
Confidence 89999999999 9999999999999999998764 2333332110 112222333467889999975
Q ss_pred CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc--cCCCC
Q 015290 348 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS--YRRDN 408 (409)
Q Consensus 348 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s--~dg~i 408 (409)
+.|++||+.+ ++.+..+.+|...+ .+++|+|++.+|++++ .|++|
T Consensus 259 g~i~vwd~~~-~~~~~~~~~h~~~v---------------~~~~~~p~~~~l~s~~~~~d~~i 305 (312)
T 4ery_A 259 NLVYIWNLQT-KEIVQKLQGHTDVV---------------ISTACHPTENIIASAALENDKTI 305 (312)
T ss_dssp SCEEEEETTT-CCEEEEECCCSSCE---------------EEEEECSSSSEEEEEECTTTCCE
T ss_pred CEEEEEECCC-chhhhhhhccCCcE---------------EEEeecCcCCceEEEEccCCccE
Confidence 9999999986 88899999998876 6999999999999987 57765
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-39 Score=292.41 Aligned_cols=307 Identities=15% Similarity=0.241 Sum_probs=223.4
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccc----
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEF---- 104 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~---- 104 (409)
++|.+.|.+++|+|||++||+|+ ++.++||++.+++. +..+.+|....
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~---------------------------~~~l~~~~~~~~~~~ 112 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL---------------------------VARLSDDSAANKDPE 112 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCE---------------------------EEEECC---------
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCE---------------------------EEEecCccccccccc
Confidence 35999999999999999999987 68999999987763 22333332100
Q ss_pred --cccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC
Q 015290 105 --DYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 182 (409)
Q Consensus 105 --~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (409)
...........|.+++| +|++++|++++.|++|++||+.+++.......+ ...+..+.+++++
T Consensus 113 ~~~~~~~~~~~~~v~~v~~--s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~~p~~ 177 (393)
T 1erj_A 113 NLNTSSSPSSDLYIRSVCF--SPDGKFLATGAEDRLIRIWDIENRKIVMILQGH-------------EQDIYSLDYFPSG 177 (393)
T ss_dssp --------CCCCBEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTS
T ss_pred cccccccCCCceeEEEEEE--CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccC-------------CCCEEEEEEcCCC
Confidence 00000011145999999 799999999999999999999988776554322 1234445556666
Q ss_pred ceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCceeeeeecCC
Q 015290 183 AHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
..+++++. |+.+++||+.+ +++...+ .+...+.+++|+| ++++|++| .|+.|++||++ .+..+..+....
T Consensus 178 ~~l~s~s~--d~~v~iwd~~~---~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~-~~~~~~~~~~~~ 249 (393)
T 1erj_A 178 DKLVSGSG--DRTVRIWDLRT---GQCSLTL--SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE-TGFLVERLDSEN 249 (393)
T ss_dssp SEEEEEET--TSEEEEEETTT---TEEEEEE--ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETT-TCCEEEEEC---
T ss_pred CEEEEecC--CCcEEEEECCC---CeeEEEE--EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC-CCcEEEeecccc
Confidence 77776665 89999999976 3444443 3567799999999 89999999 99999999998 666655543332
Q ss_pred CcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC
Q 015290 261 SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 340 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 340 (409)
....+|...|++++|+|++ ++|++|+.|+.|++||+++..... .... .........+.+|...|.+++|+|+++
T Consensus 250 ~~~~~h~~~v~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~~~~----~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~ 323 (393)
T 1erj_A 250 ESGTGHKDSVYSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNKS----DSKT-PNSGTCEVTYIGHKDFVLSVATTQNDE 323 (393)
T ss_dssp ---CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEEC--------------------CEEEEEECCSSCEEEEEECGGGC
T ss_pred cCCCCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEECCCCCCcc----cccC-CCCCcceEEEecccCcEEEEEECCCCC
Confidence 3346799999999999999 999999999999999998754210 0000 001111223567888999999999999
Q ss_pred EEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcC------CCCeEEEcccCCCC
Q 015290 341 HLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG------DGLHFATGSYRRDN 408 (409)
Q Consensus 341 ~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp------dg~~l~s~s~dg~i 408 (409)
+|++|+. +.|++||+.+ ++++..+.+|...+ .+++|++ ++.+||+|+.||+|
T Consensus 324 ~l~sgs~D~~v~iwd~~~-~~~~~~l~~h~~~v---------------~~v~~~~~~~~~p~~~~l~sgs~Dg~i 382 (393)
T 1erj_A 324 YILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSV---------------ISVAVANGSSLGPEYNVFATGSGDCKA 382 (393)
T ss_dssp EEEEEETTSEEEEEETTT-CCEEEEEECCSSCE---------------EEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred EEEEEeCCCeEEEEECCC-CeEEEEECCCCCCE---------------EEEEecCCcCcCCCCCEEEEECCCCcE
Confidence 9999985 9999999986 88899999998876 5888875 78999999999976
No 15
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.4e-38 Score=279.38 Aligned_cols=292 Identities=15% Similarity=0.127 Sum_probs=222.6
Q ss_pred ccCCCcEEEEEECCC-CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 29 LQDVDIVSAIEFDKT-GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~-~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
.+|.+.|++|+|+|+ +++||||+.||+|+|||+.+.+.. ...+...+.+|.
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~----------------------~~~~~~~l~~h~------ 86 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN----------------------YGIPQRALRGHS------ 86 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC----------------------SEEEEEEECCCS------
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc----------------------cceeeEEEeCCC------
Confidence 359999999999997 689999999999999999876531 223566789999
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| +|++++|++++.|+.|++|+.............. .........+....+++
T Consensus 87 ------~~V~~~~~--s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~s 145 (340)
T 4aow_A 87 ------HFVSDVVI--SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-------------KDVLSVAFSSDNRQIVS 145 (340)
T ss_dssp ------SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS-------------SCEEEEEECTTSSCEEE
T ss_pred ------CCEEEEEE--CCCCCEEEEEcccccceEEeecccceeeeecCCC-------------CceeEEEEeecCcccee
Confidence 89999999 7999999999999999999998876655433221 12223333444555665
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCC--CeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDC--ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
++. |+.+++||..... .......+|...+..++|++++ ..++++ .|+.|++||++ ....... +.
T Consensus 146 ~s~--d~~~~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~-~~~~~~~-------~~ 212 (340)
T 4aow_A 146 GSR--DKTIKLWNTLGVC---KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKTN-------HI 212 (340)
T ss_dssp EET--TSCEEEECTTSCE---EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT-TTEEEEE-------EC
T ss_pred ecC--CCeEEEEEeCCCc---eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECC-CCceeeE-------ec
Confidence 554 8999999986532 2222236889999999998864 567778 99999999999 6666655 67
Q ss_pred CccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 344 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 344 (409)
+|...|++++|+|++ ++|++|+.||.|++||+++.+. +..+.. ...+.+++|+|++.++++
T Consensus 213 ~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~iwd~~~~~~----~~~~~~--------------~~~v~~~~~~~~~~~~~~ 273 (340)
T 4aow_A 213 GHTGYLNTVTVSPDG-SLCASGGKDGQAMLWDLNEGKH----LYTLDG--------------GDIINALCFSPNRYWLCA 273 (340)
T ss_dssp CCSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEE----EEEEEC--------------SSCEEEEEECSSSSEEEE
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCeEEEEEeccCce----eeeecC--------------CceEEeeecCCCCceeec
Confidence 899999999999999 9999999999999999998653 233333 357999999999988888
Q ss_pred eecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 345 RDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 345 g~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+.|+.|++||++. +..+..+..+..... .......|++++|+|||++|++|+.||+|
T Consensus 274 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~------~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 274 ATGPSIKIWDLEG-KIIVDELKQEVISTS------SKAEPPQCTSLAWSADGQTLFAGYTDNLV 330 (340)
T ss_dssp EETTEEEEEETTT-TEEEEEECCC-------------CCCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred cCCCEEEEEECCC-CeEEEeccccceeee------ccCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 7889999999985 666666543221110 00011123799999999999999999986
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.4e-38 Score=300.93 Aligned_cols=297 Identities=15% Similarity=0.208 Sum_probs=216.8
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeec-------CCCc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQ-------SHEP 102 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~ 102 (409)
+|.+.|++++|+|||++||+|+.|++|+|||+.+++. ...+. +|.
T Consensus 188 ~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~---------------------------~~~~~~~~~~~~~h~- 239 (611)
T 1nr0_A 188 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK---------------------------TGVFEDDSLKNVAHS- 239 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE---------------------------EEECBCTTSSSCSSS-
T ss_pred cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE---------------------------eeeeccccccccccC-
Confidence 4999999999999999999999999999999887652 23332 677
Q ss_pred cccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcc--cccc----------------
Q 015290 103 EFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPF--VSSE---------------- 164 (409)
Q Consensus 103 ~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~---------------- 164 (409)
+.|.+++| +|++++|++++.|++|++||+.+++............ ...+
T Consensus 240 -----------~~V~~v~~--spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i 306 (611)
T 1nr0_A 240 -----------GSVFGLTW--SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 306 (611)
T ss_dssp -----------SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred -----------CCEEEEEE--CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcE
Confidence 89999999 7999999999999999999999887655443211000 0000
Q ss_pred ------------cccccccCceeccCCCCCceeecccccccceeEEEecCCcccceee----------------------
Q 015290 165 ------------NTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQ---------------------- 210 (409)
Q Consensus 165 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------- 210 (409)
........+..+.+++++.++++++. |+.|++||+.+.......
T Consensus 307 ~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~--D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~ 384 (611)
T 1nr0_A 307 NFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA--EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV 384 (611)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEE
T ss_pred EEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC--CCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEE
Confidence 00011223344555667777776665 778888887642110000
Q ss_pred ------e--------------------------------------------ee------ccccccceeEEEeCCCCCeEE
Q 015290 211 ------K--------------------------------------------VY------PHAHDFNINSISNNSDCETFV 234 (409)
Q Consensus 211 ------~--------------------------------------------~~------~~~~~~~v~~l~~~~~~~~l~ 234 (409)
+ .+ ...|...+.+++|+|++++|+
T Consensus 385 s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~la 464 (611)
T 1nr0_A 385 SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVA 464 (611)
T ss_dssp ETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEE
T ss_pred EcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEE
Confidence 0 00 001345578999999999999
Q ss_pred Ee-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCC-ccccccccccccc
Q 015290 235 SA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQ-SALCDHSARILRD 312 (409)
Q Consensus 235 ~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~ 312 (409)
+| .|++|++||+. .+...... ..+|...|++++|+|+| ++|++++.|++|++||+.+ ++.. ..
T Consensus 465 sgs~D~~v~lwd~~-~~~~~~~~------~~~h~~~v~~v~fspdg-~~las~s~d~~v~~w~~~~~~~~~----~~--- 529 (611)
T 1nr0_A 465 VGGQDSKVHVYKLS-GASVSEVK------TIVHPAEITSVAFSNNG-AFLVATDQSRKVIPYSVANNFELA----HT--- 529 (611)
T ss_dssp EEETTSEEEEEEEE-TTEEEEEE------EEECSSCEEEEEECTTS-SEEEEEETTSCEEEEEGGGTTEES----CC---
T ss_pred EeCCCCeEEEEEcc-CCceeeee------ccCCCCceEEEEECCCC-CEEEEEcCCCCEEEEEcCCCCcee----ee---
Confidence 99 99999999998 43322111 24688999999999999 9999999999999999876 3321 10
Q ss_pred cccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcce-EEEecc-cCcccccccccCCCCccceee
Q 015290 313 AAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPV-ATFKIH-EHLRPKLCDLYNNDSIFDKFE 389 (409)
Q Consensus 313 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~v~~ 389 (409)
..+.+|...|.+++|+|||++||+|+ |++|++||+....+.+ ..+.+| ...+ .+
T Consensus 530 --------~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v---------------~~ 586 (611)
T 1nr0_A 530 --------NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSV---------------NS 586 (611)
T ss_dssp --------CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCE---------------EE
T ss_pred --------eeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCe---------------eE
Confidence 01233678999999999999999998 5999999998633344 566677 5554 69
Q ss_pred EEEcCCCCeEEEcccCCCC
Q 015290 390 CSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 390 ~~~spdg~~l~s~s~dg~i 408 (409)
++|+||++ |++++.|++|
T Consensus 587 v~fs~d~~-l~s~~~D~~i 604 (611)
T 1nr0_A 587 VIWLNETT-IVSAGQDSNI 604 (611)
T ss_dssp EEEEETTE-EEEEETTSCE
T ss_pred EEEcCCCE-EEEecCCCCE
Confidence 99999998 9999999986
No 17
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.7e-38 Score=274.37 Aligned_cols=249 Identities=15% Similarity=0.213 Sum_probs=193.1
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|+|++||+|+.|++|+|||+.+... +.+..+.+|.
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~-------------------------~~~~~l~gH~------- 53 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH-------------------------KLIDTLTGHE------- 53 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB-------------------------CCCEEECCCS-------
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc-------------------------EEEEEEcccc-------
Confidence 45999999999999999999999999999999975421 2457789999
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
+.|.+++|.|..++++|++++.|++|++||+.+++....
T Consensus 54 -----~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~------------------------------------ 92 (297)
T 2pm7_B 54 -----GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI------------------------------------ 92 (297)
T ss_dssp -----SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC------------------------------------
T ss_pred -----CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE------------------------------------
Confidence 899999994222488999999999999999987642211
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC--CCeEEEe-cCCeEEEEEccCCCce-eeeeecCCCcCc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQC-FNIVDMKPSNMD 264 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~-~d~~i~lwd~~~~~~~-~~~~~~~~~~~~ 264 (409)
..+ .+|...|.+++|+|+ +.+|+++ .|+.|++||++..... ... +.
T Consensus 93 ----------------------~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~-------~~ 142 (297)
T 2pm7_B 93 ----------------------AVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII-------ID 142 (297)
T ss_dssp ----------------------EEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE-------EE
T ss_pred ----------------------EEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeee-------ee
Confidence 111 578899999999997 8899999 9999999999833222 222 57
Q ss_pred CccCceEEEEEeCCC------------CCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceee
Q 015290 265 DLTEVITSAEFHPIY------------CNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 332 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 332 (409)
+|...|.+++|+|++ .++|++|+.|+.|++||+++++....... .+.+|...|.+
T Consensus 143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~-------------~l~~H~~~V~~ 209 (297)
T 2pm7_B 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES-------------TLEGHSDWVRD 209 (297)
T ss_dssp CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEE-------------EECCCSSCEEE
T ss_pred cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEE-------------EecCCCCceEE
Confidence 899999999999972 16999999999999999987542100011 24567889999
Q ss_pred eEeccCC---CEEEEee-cCeEEEEEccCCCcc-e-EEE--ecccCcccccccccCCCCccceeeEEEcCCCCeEEEccc
Q 015290 333 IKFANDG---QHLLSRD-YMNLKLWDIRMDSTP-V-ATF--KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY 404 (409)
Q Consensus 333 ~~~s~~g---~~l~sg~-~~~v~iwd~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~ 404 (409)
++|+|++ ++||+++ |++|+|||++..... . ..+ ..|...+ .+++|+|+|++||+++.
T Consensus 210 v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v---------------~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 210 VAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL---------------WRASWSLSGNVLALSGG 274 (297)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE---------------EEEEECSSSCCEEEEET
T ss_pred EEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcE---------------EEEEECCCCCEEEEEcC
Confidence 9999995 8999997 599999999752211 1 222 2333332 69999999999999999
Q ss_pred CCCC
Q 015290 405 RRDN 408 (409)
Q Consensus 405 dg~i 408 (409)
||+|
T Consensus 275 D~~v 278 (297)
T 2pm7_B 275 DNKV 278 (297)
T ss_dssp TSCE
T ss_pred CCcE
Confidence 9976
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-37 Score=273.96 Aligned_cols=287 Identities=14% Similarity=0.146 Sum_probs=210.8
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeee-cC-CCcccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEF-QS-HEPEFDYL 107 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~~~~~ 107 (409)
+|.+.|++++|+|+ +||+|+.|+.|+|||+..+.. +....+ .+ |.
T Consensus 12 ~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-------------------------~~~~~~~~~~h~------ 58 (330)
T 2hes_X 12 LYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-------------------------TLIDVLDETAHK------ 58 (330)
T ss_dssp CCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-------------------------EEEEEECTTCCC------
T ss_pred cCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-------------------------EEEEEEecCCcc------
Confidence 38999999999987 999999999999999986532 133344 34 87
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCce-------eeeeeccCCCcccccccccccccCceeccCCC
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK-------VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP 180 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (409)
+.|.+++| +|++++|++++.|++|++||+.... ...... .....+..+.+++
T Consensus 59 ------~~v~~v~~--sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~-------------~h~~~V~~v~~sp 117 (330)
T 2hes_X 59 ------KAIRSVAW--RPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE-------------GHENEVKGVAWSN 117 (330)
T ss_dssp ------SCEEEEEE--CTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----------------CEEEEEECT
T ss_pred ------CCEEEEEE--CCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc-------------CCCCcEEEEEECC
Confidence 89999999 7899999999999999999986431 111111 1223455566677
Q ss_pred CCceeecccccccceeEEEecCC-cccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCC--ceeeee
Q 015290 181 SFAHGYHLEWTENMATKIANVGN-SVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISD--QCFNIV 256 (409)
Q Consensus 181 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~--~~~~~~ 256 (409)
++.++++++. |+.|++||+.. ....+++..+ .+|...|.+++|+|++++|++| .|++|++||.. .+ .++..
T Consensus 118 ~g~~las~s~--D~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~-~~~~~~~~~- 192 (330)
T 2hes_X 118 DGYYLATCSR--DKSVWIWETDESGEEYECISVL-QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDY-DDDWECVAV- 192 (330)
T ss_dssp TSCEEEEEET--TSCEEEEECCTTCCCCEEEEEE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEE-TTEEEEEEE-
T ss_pred CCCEEEEEeC--CCEEEEEeccCCCCCeEEEEEe-ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC-CCCeeEEEE-
Confidence 7888888776 99999999953 3334556665 8899999999999999999999 99999999987 33 34444
Q ss_pred ecCCCcCcCccCceEEEEEeCC--CCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccc-ccccceeee
Q 015290 257 DMKPSNMDDLTEVITSAEFHPI--YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFT-EIIASISDI 333 (409)
Q Consensus 257 ~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 333 (409)
+.+|...|.+++|+|+ + .+|++|+.|++|++||++.+..... ..+.. ...+. .|...|.++
T Consensus 193 ------~~~h~~~v~~~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~~~--~~~~~-------~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 193 ------LNGHEGTVWSSDFDKTEGV-FRLCSGSDDSTVRVWKYMGDDEDDQ--QEWVC-------EAILPDVHKRQVYNV 256 (330)
T ss_dssp ------ECCCSSCEEEEEECCSSSS-CEEEEEETTSCEEEEEEEEECTTSC--EEEEE-------EEECCSCCSSCEEEE
T ss_pred ------ccCCCCcEEEEEecCCCCe-eEEEEEeCCCeEEEEEecCCCcccc--ceeEE-------eeecccccccceEEE
Confidence 6889999999999998 5 7899999999999999876421100 00000 01122 267899999
Q ss_pred EeccCCCEEEEee-cCeEEEEEccCCCc--ceEEE-ecccC-cccccccccCCCCccceeeEEEcC--CCCeEEEcccCC
Q 015290 334 KFANDGQHLLSRD-YMNLKLWDIRMDST--PVATF-KIHEH-LRPKLCDLYNNDSIFDKFECSVSG--DGLHFATGSYRR 406 (409)
Q Consensus 334 ~~s~~g~~l~sg~-~~~v~iwd~~~~~~--~~~~~-~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp--dg~~l~s~s~dg 406 (409)
+|++++ +|++++ |+.|++||... ++ .+... .+|.. .+ .+++|+| ++++||+|+.||
T Consensus 257 ~~s~~~-~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~h~~~~v---------------~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 257 AWGFNG-LIASVGADGVLAVYEEVD-GEWKVFAKRALCHGVYEI---------------NVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp EECTTS-CEEEEETTSCEEEEEEET-TEEEEEEEESCTTTTSCE---------------EEEEEC-----CCEEEEETTS
T ss_pred EEcCCC-EEEEEeCCCEEEEEEcCC-CceEEEeccccccccceE---------------EEEEEecCCCceEEEEecCCC
Confidence 999766 677776 59999999874 42 23222 34544 33 6899999 789999999999
Q ss_pred CC
Q 015290 407 DN 408 (409)
Q Consensus 407 ~i 408 (409)
+|
T Consensus 320 ~v 321 (330)
T 2hes_X 320 IV 321 (330)
T ss_dssp EE
T ss_pred cE
Confidence 76
No 19
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.5e-37 Score=301.97 Aligned_cols=300 Identities=16% Similarity=0.183 Sum_probs=228.1
Q ss_pred ccCCCcEEEEEECCCC-CEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 29 LQDVDIVSAIEFDKTG-DYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~-~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
.+|.+.|++|+|+|++ ++|++|+.||+|+||++...... .......+.+|.
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~----------------------~~~~~~~~~~h~------ 430 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA----------------------YGVAQRRLTGHS------ 430 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC----------------------SCEEEEEEECCS------
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc----------------------cccccceecCCC------
Confidence 3599999999999864 79999999999999999765421 112345688999
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| +|++++|++++.|++|++||+.++........+ ...+..+.+++++..+++
T Consensus 431 ------~~v~~v~~--s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h-------------~~~v~~~~~s~~~~~l~s 489 (694)
T 3dm0_A 431 ------HFVEDVVL--SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGH-------------TKDVLSVAFSLDNRQIVS 489 (694)
T ss_dssp ------SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-------------SSCEEEEEECTTSSCEEE
T ss_pred ------CcEEEEEE--CCCCCEEEEEeCCCcEEEEECCCCcceeEEeCC-------------CCCEEEEEEeCCCCEEEE
Confidence 89999999 799999999999999999999988766554322 223445555666677777
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCC--CeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDC--ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
++. |+.|++||............ ..+|...|.+++|+|++ ..++++ .|++|++||++ ....... +.
T Consensus 490 ~s~--D~~i~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~-~~~~~~~-------~~ 558 (694)
T 3dm0_A 490 ASR--DRTIKLWNTLGECKYTISEG-GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS-NCKLRST-------LA 558 (694)
T ss_dssp EET--TSCEEEECTTSCEEEEECSS-TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT-TCCEEEE-------EC
T ss_pred EeC--CCEEEEEECCCCcceeeccC-CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC-CCcEEEE-------Ec
Confidence 665 99999999865322222111 25788999999999986 578898 99999999998 5666555 67
Q ss_pred CccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 344 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 344 (409)
+|...|++++|+|++ ++|++|+.||.|++||+++++. +..+.. ...+.+++|+|++.+|++
T Consensus 559 ~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~~~----~~~~~~--------------~~~v~~~~~sp~~~~l~~ 619 (694)
T 3dm0_A 559 GHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGKK----LYSLEA--------------NSVIHALCFSPNRYWLCA 619 (694)
T ss_dssp CCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTTTEE----EECCBC--------------SSCEEEEEECSSSSEEEE
T ss_pred CCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCce----EEEecC--------------CCcEEEEEEcCCCcEEEE
Confidence 899999999999999 9999999999999999998763 122222 357999999999999999
Q ss_pred eecCeEEEEEccCCCcceEEEecccCccccccc----ccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 345 RDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCD----LYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 345 g~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
++++.|++||+++ ++.+..+..+......... .........+++++|+|||++|++|+.||+|
T Consensus 620 ~~~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i 686 (694)
T 3dm0_A 620 ATEHGIKIWDLES-KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVI 686 (694)
T ss_dssp EETTEEEEEETTT-TEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEE
T ss_pred EcCCCEEEEECCC-CCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeE
Confidence 9888899999986 7777777654322100000 0011122234789999999999999999986
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.2e-38 Score=299.43 Aligned_cols=299 Identities=11% Similarity=0.123 Sum_probs=222.6
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
+.+.+.+++|+|||++||+++ ++.|+||++.++.. ...+.+|.
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~---------------------------~~~~~~h~--------- 59 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTD---------------------------TEIYTEHS--------- 59 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSC---------------------------CEEECCCS---------
T ss_pred ccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCccc---------------------------CeEecCCC---------
Confidence 567889999999999999997 56999999986653 46788999
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
..|++++| +|+|++|++++.|++|+|||+.+++......+ ....+.+..+.+++++..++.++.
T Consensus 60 ---~~v~~~~~--spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~-----------~~~~~~v~~v~fs~dg~~l~~~~~ 123 (611)
T 1nr0_A 60 ---HQTTVAKT--SPSGYYCASGDVHGNVRIWDTTQTTHILKTTI-----------PVFSGPVKDISWDSESKRIAAVGE 123 (611)
T ss_dssp ---SCEEEEEE--CTTSSEEEEEETTSEEEEEESSSTTCCEEEEE-----------ECSSSCEEEEEECTTSCEEEEEEC
T ss_pred ---CceEEEEE--CCCCcEEEEEeCCCCEEEeECCCCcceeeEee-----------cccCCceEEEEECCCCCEEEEEEC
Confidence 89999999 89999999999999999999975433221111 011234555666777777776654
Q ss_pred cc--cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCC-eEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 191 TE--NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 191 ~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
.. .+.+++||.. ++...+ .+|...|.+++|+|++. .|++| .|++|++||.. ..+.... +.+|
T Consensus 124 ~~~~~~~v~~wd~~-----~~~~~l-~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~-~~~~~~~-------l~~H 189 (611)
T 1nr0_A 124 GRERFGHVFLFDTG-----TSNGNL-TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP-PFKFKST-------FGEH 189 (611)
T ss_dssp CSSCSEEEEETTTC-----CBCBCC-CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT-TBEEEEE-------ECCC
T ss_pred CCCceeEEEEeeCC-----CCccee-cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC-CCeEeee-------eccc
Confidence 32 3578888853 334444 78999999999999987 58898 99999999988 5666655 6889
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
...|++++|+|++ ++|++++.|++|++||+.+++.. ..+.. ......+|...|.+++|+|+|++|++++
T Consensus 190 ~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~----~~~~~------~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 190 TKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKT----GVFED------DSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEE----EECBC------TTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred cCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEe----eeecc------ccccccccCCCEEEEEECCCCCEEEEEe
Confidence 9999999999999 99999999999999999887531 22211 0001125788999999999999999997
Q ss_pred -cCeEEEEEccCCCcceEEEecccCcccc---------------------cccc-------cCCCCccceeeEEEcCCCC
Q 015290 347 -YMNLKLWDIRMDSTPVATFKIHEHLRPK---------------------LCDL-------YNNDSIFDKFECSVSGDGL 397 (409)
Q Consensus 347 -~~~v~iwd~~~~~~~~~~~~~~~~~~~~---------------------~~~~-------~~~~~~~~v~~~~~spdg~ 397 (409)
|++|++||+.+ ++++..+..+...... +.+. ........|++++|+|||+
T Consensus 259 ~D~~v~lWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~ 337 (611)
T 1nr0_A 259 ADKTIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK 337 (611)
T ss_dssp TTSEEEEEETTT-TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCCeEEEEeCCC-CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC
Confidence 59999999986 6666665432110000 0000 0001112357999999999
Q ss_pred eEEEcccCCCC
Q 015290 398 HFATGSYRRDN 408 (409)
Q Consensus 398 ~l~s~s~dg~i 408 (409)
+|++++.||+|
T Consensus 338 ~l~s~s~D~~v 348 (611)
T 1nr0_A 338 TLFSADAEGHI 348 (611)
T ss_dssp EEEEEETTSCE
T ss_pred EEEEEeCCCcE
Confidence 99999999976
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-37 Score=295.04 Aligned_cols=272 Identities=21% Similarity=0.294 Sum_probs=223.8
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|...|.+++|+|++++|++++.||.|++||..+.. +..+.+|.
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~----------------------------~~~~~~~~------- 344 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH----------------------------LQTLTGHS------- 344 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE----------------------------EEEECCCS-------
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe----------------------------eEEEeCCC-------
Confidence 3589999999999999999999999999999976543 45678888
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+++| +|++++|++++.|+.|++|+.... .......+ ...+..+.+++++.+++.+
T Consensus 345 -----~~v~~~~~--s~~g~~l~~~~~dg~v~~~~~~~~-~~~~~~~~-------------~~~v~~~~~s~dg~~l~~~ 403 (577)
T 2ymu_A 345 -----SSVWGVAF--SPDGQTIASASDDKTVKLWNRNGQ-LLQTLTGH-------------SSSVRGVAFSPDGQTIASA 403 (577)
T ss_dssp -----SCEEEEEE--CTTSSEEEEEETTSEEEEEETTCC-EEEEEECC-------------SSCEEEEEECTTSSCEEEE
T ss_pred -----CCEEEEEE--CCCCCEEEEEeCCCEEEEEcCCCC-EEEEecCC-------------CCCeEEEEECCCCCEEEEE
Confidence 89999999 799999999999999999996543 33322211 1223344455666777766
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
.. ++.|++|+... +.+..+ .+|...|.+++|+|++++|+++ .|+.|++||.. ++.+.. +.+|.
T Consensus 404 ~~--d~~v~~~~~~~----~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~-------~~~~~ 467 (577)
T 2ymu_A 404 SD--DKTVKLWNRNG----QLLQTL-TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQT-------LTGHS 467 (577)
T ss_dssp ET--TSEEEEECTTC----CEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SCEEEE-------EECCS
T ss_pred eC--CCEEEEEeCCC----CEEEEe-cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEE-------EcCCC
Confidence 54 88999999643 455555 7899999999999999999999 99999999976 555554 57899
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec
Q 015290 268 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
..|++++|+|++ ++|++++.|+.|++||... +. .+.+ .+|...|++++|+|+|++|+++++
T Consensus 468 ~~v~~~~~spd~-~~las~~~d~~i~iw~~~~-~~----~~~~-------------~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 468 SSVRGVAFSPDG-QTIASASDDKTVKLWNRNG-QL----LQTL-------------TGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp SCEEEEEECTTS-CEEEEEETTSEEEEEETTS-CE----EEEE-------------ECCSSCEEEEEECTTSSCEEEEET
T ss_pred CCEEEEEEcCCC-CEEEEEeCCCEEEEEcCCC-CE----EEEE-------------eCCCCCEEEEEEcCCCCEEEEEEC
Confidence 999999999999 9999999999999999643 22 2333 345789999999999999999975
Q ss_pred -CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 348 -MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 348 -~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+.|+|||.. ++++..+.+|...+ ++++|+|||++|+|++.|++|
T Consensus 529 dg~v~lwd~~--~~~~~~~~~h~~~v---------------~~~~fs~dg~~l~s~~~D~~i 573 (577)
T 2ymu_A 529 DKTVKLWNRN--GQLLQTLTGHSSSV---------------WGVAFSPDGQTIASASSDKTV 573 (577)
T ss_dssp TSEEEEECTT--SCEEEEEECCSSCE---------------EEEEECTTSSCEEEEETTSCE
T ss_pred cCEEEEEeCC--CCEEEEEcCCCCCE---------------EEEEEcCCCCEEEEEeCCCEE
Confidence 999999964 78999999999876 699999999999999999986
No 22
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-37 Score=273.84 Aligned_cols=283 Identities=11% Similarity=0.102 Sum_probs=229.8
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..+|.+.|++++|+|++++||+|+.||.|++||+.+++ .+..+.+|.
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---------------------------~~~~~~~h~------ 74 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE---------------------------RLGTLDGHT------ 74 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC---------------------------EEEEECCCS------
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch---------------------------hhhhhhhcC------
Confidence 34599999999999999999999999999999998776 467788998
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| +|++++|++++.|+.|++||+.+++...... .. ..+..+.+++++.+++.
T Consensus 75 ------~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~------------~~v~~~~~~~~~~~l~~ 132 (369)
T 3zwl_B 75 ------GTIWSIDV--DCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SP------------VPVKRVEFSPCGNYFLA 132 (369)
T ss_dssp ------SCEEEEEE--CTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CS------------SCEEEEEECTTSSEEEE
T ss_pred ------CcEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cC------------CCeEEEEEccCCCEEEE
Confidence 89999999 7899999999999999999999887766544 11 22334445555566655
Q ss_pred ccc---cccceeEEEecCCcccce--------eeeeecccccc--ceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCcee
Q 015290 188 LEW---TENMATKIANVGNSVHAR--------CQKVYPHAHDF--NINSISNNSDCETFVSA-DDLRINLWNLEISDQCF 253 (409)
Q Consensus 188 ~~~---~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~--~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~ 253 (409)
+.. ..++.+++|++....... ....+ ..|.. .+.+++|+|++++|+++ .||.|++||++......
T Consensus 133 ~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 211 (369)
T 3zwl_B 133 ILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI-ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYV 211 (369)
T ss_dssp EECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEE
T ss_pred ecCCccCCCCEEEEEEecCCccceeecccccceeeec-cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeE
Confidence 543 123899999997643221 22222 34555 89999999999999999 99999999999435666
Q ss_pred eeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeee
Q 015290 254 NIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDI 333 (409)
Q Consensus 254 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 333 (409)
.. +..|...|.+++|+|++ .+|++++.|+.|++||+++++. ...+.. ...+..+
T Consensus 212 ~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~----~~~~~~--------------~~~~~~~ 265 (369)
T 3zwl_B 212 DS-------IDLHEKSISDMQFSPDL-TYFITSSRDTNSFLVDVSTLQV----LKKYET--------------DCPLNTA 265 (369)
T ss_dssp EE-------EECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE----EEEEEC--------------SSCEEEE
T ss_pred EE-------EecCCCceeEEEECCCC-CEEEEecCCceEEEEECCCCce----eeeecC--------------CCCceeE
Confidence 55 57788999999999999 9999999999999999998754 223322 4679999
Q ss_pred EeccCCCEEEEeec-C--------------eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCe
Q 015290 334 KFANDGQHLLSRDY-M--------------NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLH 398 (409)
Q Consensus 334 ~~s~~g~~l~sg~~-~--------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 398 (409)
+|+|+++++++++. + .+++||+.+ ++.+..+.+|...+ .+++|+|++++
T Consensus 266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v---------------~~~~~s~~~~~ 329 (369)
T 3zwl_B 266 VITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHFGPL---------------NTVAISPQGTS 329 (369)
T ss_dssp EECSSSSEEEEEECCC-------------CEEEEEETTT-CCEEEEEECCSSCE---------------EEEEECTTSSE
T ss_pred EecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC-CcchhheecccCcE---------------EEEEECCCCCE
Confidence 99999999999864 5 899999986 88899999998876 69999999999
Q ss_pred EEEcccCCCC
Q 015290 399 FATGSYRRDN 408 (409)
Q Consensus 399 l~s~s~dg~i 408 (409)
|++++.||.|
T Consensus 330 l~s~~~dg~v 339 (369)
T 3zwl_B 330 YASGGEDGFI 339 (369)
T ss_dssp EEEEETTSEE
T ss_pred EEEEcCCCeE
Confidence 9999999976
No 23
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.2e-38 Score=276.48 Aligned_cols=250 Identities=14% Similarity=0.180 Sum_probs=192.0
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|+|++||+|+.|++|+|||+.++.. ..+..+.+|.
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-------------------------~~~~~l~gH~------- 57 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-------------------------ILIADLRGHE------- 57 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-------------------------EEEEEEECCS-------
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-------------------------EEEEEEcCCC-------
Confidence 35999999999999999999999999999999986532 2456789999
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
+.|.+++|.|..++++|++++.|++|++||+.++.....
T Consensus 58 -----~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~------------------------------------ 96 (316)
T 3bg1_A 58 -----GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKS------------------------------------ 96 (316)
T ss_dssp -----SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEE------------------------------------
T ss_pred -----ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEE------------------------------------
Confidence 899999994212588999999999999999987542211
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC--CCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
..+ .+|...|.+++|+|+ +.+|++| .|+.|++||++..... ... ..+.+
T Consensus 97 ----------------------~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~-~~~----~~~~~ 148 (316)
T 3bg1_A 97 ----------------------HEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW-EVK----KINNA 148 (316)
T ss_dssp ----------------------EEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE-EEC----CBTTS
T ss_pred ----------------------EEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc-cee----eeecc
Confidence 111 678999999999998 7899999 9999999999833221 110 12578
Q ss_pred ccCceEEEEEeCCC----------------CCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccc
Q 015290 266 LTEVITSAEFHPIY----------------CNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIAS 329 (409)
Q Consensus 266 ~~~~v~~~~~~p~~----------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (409)
|...+.+++|+|+. .++|++|+.|+.|++||++..... .... .+.+|...
T Consensus 149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~-~~~~-------------~l~~h~~~ 214 (316)
T 3bg1_A 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW-KEEQ-------------KLEAHSDW 214 (316)
T ss_dssp SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE-EEEE-------------CCBCCSSC
T ss_pred ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc-ceee-------------ecccCCCc
Confidence 88999999999972 168999999999999998753210 0011 24556789
Q ss_pred eeeeEeccCC----CEEEEee-cCeEEEEEccCC--C-cceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEE
Q 015290 330 ISDIKFANDG----QHLLSRD-YMNLKLWDIRMD--S-TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT 401 (409)
Q Consensus 330 i~~~~~s~~g----~~l~sg~-~~~v~iwd~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 401 (409)
|.+++|+|++ ++|++|+ |++|+|||+... + .....+..|...+ ++++|+|+|++||+
T Consensus 215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v---------------~~v~~sp~g~~las 279 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVV---------------WHVSWSITANILAV 279 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCE---------------EEEEECTTTCCEEE
T ss_pred eEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcE---------------EEEEEcCCCCEEEE
Confidence 9999999987 7899997 599999998741 1 1233455565554 69999999999999
Q ss_pred cccCCCC
Q 015290 402 GSYRRDN 408 (409)
Q Consensus 402 ~s~dg~i 408 (409)
++.||+|
T Consensus 280 ~~~D~~v 286 (316)
T 3bg1_A 280 SGGDNKV 286 (316)
T ss_dssp EESSSCE
T ss_pred EcCCCeE
Confidence 9999986
No 24
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.9e-37 Score=283.42 Aligned_cols=295 Identities=12% Similarity=0.056 Sum_probs=206.0
Q ss_pred cCCCcEEEEEECC-CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 30 QDVDIVSAIEFDK-TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 30 ~h~~~v~~v~~~~-~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.|...|+||+|+| ++++||+|+.||.|+|||+.+++.. ....+.+|.
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-------------------------~~~~~~gH~------- 164 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-------------------------TFIKGIGAG------- 164 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-------------------------EEECCCSSS-------
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-------------------------eEEEccCCC-------
Confidence 4788999999999 5679999999999999999876531 344567898
Q ss_pred cceeccceEEEEEEecC-CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 109 SLEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
+.|++|+| +| ++.+|++++.|++|++||+.++........+.. ...+....+++++.+++.
T Consensus 165 -----~~V~~l~f--~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~ 226 (435)
T 4e54_B 165 -----GSITGLKF--NPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTI-----------NIWFCSLDVSASSRMVVT 226 (435)
T ss_dssp -----CCCCEEEE--CSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSC-----------SCCCCCEEEETTTTEEEE
T ss_pred -----CCEEEEEE--eCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCC-----------CccEEEEEECCCCCEEEE
Confidence 89999999 55 788999999999999999987765544332211 111223334455666776
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCC-eEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
+.. ++.|++||++. +.+..+ .+|...|.+++|+|+++ ++++| .|+.|++||++ .......+ ....+
T Consensus 227 g~~--dg~i~~wd~~~----~~~~~~-~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~-~~~~~~~~----~~~~~ 294 (435)
T 4e54_B 227 GDN--VGNVILLNMDG----KELWNL-RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR-QVRGKASF----LYSLP 294 (435)
T ss_dssp ECS--SSBEEEEESSS----CBCCCS-BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT-TCCSSSCC----SBCCB
T ss_pred EeC--CCcEeeeccCc----ceeEEE-ecccceEEeeeecCCCceEEEEecCcceeeEEecc-cccccceE----EEeee
Confidence 665 89999999865 344444 78999999999999986 56778 99999999998 33322211 12467
Q ss_pred ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccC-Ccccc---cccccceeeeEeccCCCE
Q 015290 266 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHG-SKSFF---TEIIASISDIKFANDGQH 341 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~i~~~~~s~~g~~ 341 (409)
|...|++++|+|++ .+|++++.||.|++||++++... ..+..|..... ....+ -.....+..+.+++++.+
T Consensus 295 h~~~v~~~~~spdg-~~l~s~~~D~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 369 (435)
T 4e54_B 295 HRHPVNAACFSPDG-ARLLTTDQKSEIRVYSASQWDCP----LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNF 369 (435)
T ss_dssp CSSCEEECCBCTTS-SEEEEEESSSCEEEEESSSSSSE----EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTS
T ss_pred ccccccceeECCCC-CeeEEEcCCCEEEEEECCCCccc----eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCe
Confidence 89999999999999 99999999999999999987532 22222111000 00000 001122333344444444
Q ss_pred EEEe-ec-CeEEEEEccCCCcceEEEe-cccCcccccccccCCCCccceeeE-EEcCCCCeEEEcccCCCC
Q 015290 342 LLSR-DY-MNLKLWDIRMDSTPVATFK-IHEHLRPKLCDLYNNDSIFDKFEC-SVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 342 l~sg-~~-~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~-~~spdg~~l~s~s~dg~i 408 (409)
++++ .+ +.|++||..+ ++.+..+. +|...+ .++ +|+|||++||+|+ |++|
T Consensus 370 ~~~~~~~~~~i~iwd~~~-g~~~~~l~~~~~~~v---------------~s~~~fspdg~~lasg~-d~~i 423 (435)
T 4e54_B 370 KSCTPYELRTIDVFDGNS-GKMMCQLYDPESSGI---------------SSLNEFNPMGDTLASAM-GYHI 423 (435)
T ss_dssp CCSSTTCCCCEEEECSSS-CCEEEEECCSSCCCC---------------CCEEEECTTSSCEEEEC-SSEE
T ss_pred EEEEecCCCEEEEEECCC-CcEEEEEeCCCCCcE---------------EEEEEECCCCCEEEEEc-CCcE
Confidence 3333 23 6899999986 77777765 455544 355 7999999999987 5554
No 25
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.8e-36 Score=272.37 Aligned_cols=250 Identities=13% Similarity=0.133 Sum_probs=201.7
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
|.++|++++|+|++++||+|+.||.|++||+.+++ ++.+..+.+|.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-------------------------~~~~~~~~~h~--------- 52 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-------------------------WVQVHELKEHN--------- 52 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-------------------------EEEEEEEECCS---------
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-------------------------EEeeeeecCCC---------
Confidence 78999999999999999999999999999998764 12466788898
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
..|.+++| +|++++|++++.|+.|++||+.+++........ .....+..+.+++++.+++.+..
T Consensus 53 ---~~v~~~~~--~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~~ 116 (372)
T 1k8k_C 53 ---GQVTGVDW--APDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL-----------RINRAARCVRWAPNEKKFAVGSG 116 (372)
T ss_dssp ---SCEEEEEE--ETTTTEEEEEETTSCEEEEEEETTEEEEEEECC-----------CCSSCEEEEEECTTSSEEEEEET
T ss_pred ---CcccEEEE--eCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee-----------cCCCceeEEEECCCCCEEEEEeC
Confidence 89999999 689999999999999999999888754443211 11223444455566667776664
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccC-----------------CCce
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEI-----------------SDQC 252 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~-----------------~~~~ 252 (409)
++.+++|+++..........+...|...|.+++|+|++++|+++ .|+.|++||++. .+..
T Consensus 117 --d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 117 --SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp --TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred --CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhh
Confidence 89999999987654444555547789999999999999999999 999999999641 2344
Q ss_pred eeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceee
Q 015290 253 FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 332 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 332 (409)
+.. +.+|...|.+++|+|++ .+|++++.|+.|++||+++++. ...+. .|...+.+
T Consensus 195 ~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~----~~~~~-------------~~~~~v~~ 249 (372)
T 1k8k_C 195 MFE-------SSSSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADKKMA----VATLA-------------SETLPLLA 249 (372)
T ss_dssp EEE-------CCCCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGGGTTE----EEEEE-------------CSSCCEEE
T ss_pred eEe-------cCCCCCeEEEEEECCCC-CEEEEEeCCCEEEEEECCCCce----eEEEc-------------cCCCCeEE
Confidence 444 56889999999999999 9999999999999999987653 23333 34568999
Q ss_pred eEeccCCCEEEEeecCeEEEEEccC
Q 015290 333 IKFANDGQHLLSRDYMNLKLWDIRM 357 (409)
Q Consensus 333 ~~~s~~g~~l~sg~~~~v~iwd~~~ 357 (409)
++|+|++++|++|.++.|++|++..
T Consensus 250 ~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 250 VTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEEETTEEEEEETTSSCEEEEEET
T ss_pred EEEecCCCEEEEEeCCeEEEEEccC
Confidence 9999999999999779999999974
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.2e-36 Score=285.35 Aligned_cols=272 Identities=20% Similarity=0.297 Sum_probs=225.4
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
..|...|.+++|+|++++|++++.|+.|++|+.... .+..+.+|.
T Consensus 259 ~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~----------------------------~~~~~~~h~------- 303 (577)
T 2ymu_A 259 TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQ----------------------------LLQTLTGHS------- 303 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC----------------------------EEEEECCCS-------
T ss_pred ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc----------------------------EEEEEecCC-------
Confidence 348899999999999999999999999999996543 356788998
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+++| +|+++.|++++.|++|++||........... ....+..+.+++++..++.+
T Consensus 304 -----~~v~~~~~--~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~--------------~~~~v~~~~~s~~g~~l~~~ 362 (577)
T 2ymu_A 304 -----SSVWGVAF--SPDGQTIASASDDKTVKLWNRNGQHLQTLTG--------------HSSSVWGVAFSPDGQTIASA 362 (577)
T ss_dssp -----SCEEEEEE--CTTSSEEEEEETTSCEEEEETTSCEEEEECC--------------CSSCEEEEEECTTSSEEEEE
T ss_pred -----CCeEEEEE--CCCCCEEEEEeCCCeEEEEeCCCCeeEEEeC--------------CCCCEEEEEECCCCCEEEEE
Confidence 89999999 7999999999999999999987765543321 11233344556667777766
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
.. ++.+++|+... +.+..+ .+|...|.+++|+|++++|+++ .|+.|++||.. ++.+.. +.+|.
T Consensus 363 ~~--dg~v~~~~~~~----~~~~~~-~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~--~~~~~~-------~~~~~ 426 (577)
T 2ymu_A 363 SD--DKTVKLWNRNG----QLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQT-------LTGHS 426 (577)
T ss_dssp ET--TSEEEEEETTC----CEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT--CCEEEE-------EECCS
T ss_pred eC--CCEEEEEcCCC----CEEEEe-cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC--CCEEEE-------ecCCC
Confidence 64 88999999643 455555 7899999999999999999999 99999999965 555555 57899
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec
Q 015290 268 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
..|++++|+|++ ++|++++.|+.|++||..... ... +.+|...|.+++|+|++++|+++++
T Consensus 427 ~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~~~-----~~~-------------~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 427 SSVWGVAFSPDD-QTIASASDDKTVKLWNRNGQL-----LQT-------------LTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp SCEEEEEECTTS-SEEEEEETTSEEEEEETTSCE-----EEE-------------EECCSSCEEEEEECTTSCEEEEEET
T ss_pred CCeEEEEECCCC-CEEEEEcCCCEEEEEECCCCE-----EEE-------------EcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 999999999999 999999999999999975422 122 2345778999999999999999975
Q ss_pred -CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 348 -MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 348 -~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+.|++||.. ++++..+.+|...+ ++++|+|||++||+++.||+|
T Consensus 488 d~~i~iw~~~--~~~~~~~~~h~~~v---------------~~l~~s~dg~~l~s~~~dg~v 532 (577)
T 2ymu_A 488 DKTVKLWNRN--GQLLQTLTGHSSSV---------------RGVAFSPDGQTIASASDDKTV 532 (577)
T ss_dssp TSEEEEEETT--SCEEEEEECCSSCE---------------EEEEECTTSSCEEEEETTSEE
T ss_pred CCEEEEEcCC--CCEEEEEeCCCCCE---------------EEEEEcCCCCEEEEEECcCEE
Confidence 999999964 78999999998876 699999999999999999976
No 27
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-37 Score=280.71 Aligned_cols=317 Identities=12% Similarity=0.126 Sum_probs=224.3
Q ss_pred cCCCcEEEEEECC-CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 30 QDVDIVSAIEFDK-TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 30 ~h~~~v~~v~~~~-~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
+|.+.|++++|+| ++++||+|+.||+|+|||+.+.+.. ..++....+ +|.
T Consensus 61 ~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~---------------------~~~~~~~~~-~h~------- 111 (437)
T 3gre_A 61 NEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG---------------------EVYSSSLTY-DCS------- 111 (437)
T ss_dssp TTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT---------------------CCCSCSEEE-ECS-------
T ss_pred CCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC---------------------cccceeeec-cCC-------
Confidence 4889999999999 9999999999999999998762210 000111112 366
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcC---CceeeeeeccCCCcccccccccc--cccCceecc--CCCC
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVR---DQKVKKIKEMDHFPFVSSENTLL--AEKNFMNEH--NPPS 181 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~ 181 (409)
..|.+++| +|++++|++++.|++|++||+. .++.......+ .+..+.+.+ .......+. .+++
T Consensus 112 -----~~v~~~~~--~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 112 -----STVTQITM--IPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE---CIRKINLKNFGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp -----SCEEEEEE--CTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE---EEEEEEGGGGSSCCCEEEEEEEECSS
T ss_pred -----CCEEEEEE--eCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc---eeEEEEccCcccccCceEEEEEEcCC
Confidence 89999999 6899999999999999999995 44433322211 122222222 222233322 4556
Q ss_pred CceeecccccccceeEEEecCCcccceeeeeeccc--cccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeec
Q 015290 182 FAHGYHLEWTENMATKIANVGNSVHARCQKVYPHA--HDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDM 258 (409)
Q Consensus 182 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~ 258 (409)
..+++.+.. ++.|++||+.+ .+++..+ .+ |...|++++|+|++++|++| .||.|++||++ .+..+..+
T Consensus 182 ~~~l~~~~~--d~~i~iwd~~~---~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~-- 252 (437)
T 3gre_A 182 KSLLVALTN--LSRVIIFDIRT---LERLQII-ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR-FNVLIRSW-- 252 (437)
T ss_dssp CEEEEEEET--TSEEEEEETTT---CCEEEEE-ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT-TTEEEEEE--
T ss_pred CCEEEEEeC--CCeEEEEeCCC---CeeeEEE-ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC-CccEEEEE--
Confidence 677777765 89999999977 4455555 44 88999999999999999999 99999999999 66666653
Q ss_pred CCCcCcCccCceEEEEEeC----CCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCc-----------ccc
Q 015290 259 KPSNMDDLTEVITSAEFHP----IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSK-----------SFF 323 (409)
Q Consensus 259 ~~~~~~~~~~~v~~~~~~p----~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 323 (409)
...|...|.+++|+| ++ .+|++|+.||.|++||+++++. ...+..|...+... ..+
T Consensus 253 ----~~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 323 (437)
T 3gre_A 253 ----SFGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFLTIWNFVKGHC----QYAFINSDEQPSMEHFLPIEKGLEELNF 323 (437)
T ss_dssp ----BCTTCEEEEEEEECTTTCTTE-EEEEEESTTEEEEEEETTTTEE----EEEEESSSSCCCGGGGSCBCSSGGGCCC
T ss_pred ----ecCCCCceEEEEeccccCCCc-cEEEEEcCCCcEEEEEcCCCcE----EEEEEcCCCCCccceeccccccccccee
Confidence 125777899996664 56 7999999999999999998763 23333321111100 013
Q ss_pred cc--cccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEecccCccccccc-----------------------
Q 015290 324 TE--IIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCD----------------------- 377 (409)
Q Consensus 324 ~~--~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~----------------------- 377 (409)
.+ |...|.+++|+ ++++|++|+ |+.|++||+.+ ++....+.+|.........
T Consensus 324 ~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (437)
T 3gre_A 324 CGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE-LSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVD 401 (437)
T ss_dssp CCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC-GGGCEEEECC--CCCEEEEEEEETTEEEEEEECC--------
T ss_pred cccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC-cccceEEecccccCceEEEEEeecceEEEEEecccccccccC
Confidence 33 88899999999 788999997 59999999986 7888888775321110000
Q ss_pred --ccCCCCccceeeEEEcCC--CCeEEEcccCCCC
Q 015290 378 --LYNNDSIFDKFECSVSGD--GLHFATGSYRRDN 408 (409)
Q Consensus 378 --~~~~~~~~~v~~~~~spd--g~~l~s~s~dg~i 408 (409)
..+.+. |.+++|+++ +.+|++|+.||.|
T Consensus 402 ~~~~h~~~---I~~i~~~~~~~~~~l~s~~~dG~I 433 (437)
T 3gre_A 402 DSLYHHDI---INSISTCEVDETPLLVACDNSGLI 433 (437)
T ss_dssp -----CCC---EEEEEEEESSSSEEEEEEETTSCE
T ss_pred cccccccc---eeeEeeeccCCceEEEEEcCCceE
Confidence 012222 479999998 8899999999987
No 28
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=264.15 Aligned_cols=242 Identities=14% Similarity=0.177 Sum_probs=204.0
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|...|.+++|++++.++++|+.|+.|++||+.+++ .+..+..|.
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~---------------------------~~~~~~~~~------- 122 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK---------------------------QIKSIDAGP------- 122 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---------------------------EEEEEECCT-------
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC---------------------------EEEEEeCCC-------
Confidence 4599999999999999999999999999999998776 356677777
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..+.+++| +|++++|++++.|+.|++|++.+++....... ....+..+.+++++.+++.+
T Consensus 123 -----~~~~~~~~--spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~-------------~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 123 -----VDAWTLAF--SPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-------------RGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp -----TCCCCEEE--CTTSSEEEEECTTSEEEEEETTTCSEEEEEEC-------------SSSCEEEEEECTTSSEEEEE
T ss_pred -----ccEEEEEE--CCCCCEEEEEcCCCcEEEEEcCCCceeEEecC-------------CCceEEEEEECCCCCEEEEE
Confidence 78999999 79999999999999999999998866544332 12234455667777888877
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
.. |+.|++||+.+ ++++..+ .+|...|.+++|+|++++|++| .|+.|++||++ ....... +.+|.
T Consensus 183 ~~--dg~i~iwd~~~---~~~~~~~-~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~-~~~~~~~-------~~~h~ 248 (321)
T 3ow8_A 183 AI--DGIINIFDIAT---GKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGT-------LSGHA 248 (321)
T ss_dssp ET--TSCEEEEETTT---TEEEEEE-CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT-TCCEEEE-------ECCCS
T ss_pred cC--CCeEEEEECCC---CcEEEEE-cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC-CcceeEE-------EcCCC
Confidence 76 89999999976 4556665 7899999999999999999999 99999999998 5665555 67899
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec
Q 015290 268 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
..|.+++|+|++ .+|++++.|+.|++||+++++. +..+ .+|...|.+++|+|+|++|+++++
T Consensus 249 ~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~~----~~~~-------------~~h~~~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 249 SWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRTC----VHTF-------------FDHQDQVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp SCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE----EEEE-------------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCEE----EEEE-------------cCCCCcEEEEEECCCCCEEEEEeC
Confidence 999999999999 9999999999999999988653 2233 345678999999999999999875
Q ss_pred -CeEEEEEcc
Q 015290 348 -MNLKLWDIR 356 (409)
Q Consensus 348 -~~v~iwd~~ 356 (409)
+.|++||..
T Consensus 311 d~~i~vwd~p 320 (321)
T 3ow8_A 311 DQEIHIYDCP 320 (321)
T ss_dssp TCCEEEEECC
T ss_pred CCeEEEEeCC
Confidence 999999963
No 29
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.1e-36 Score=273.38 Aligned_cols=243 Identities=17% Similarity=0.280 Sum_probs=201.7
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..+|.+.|++++|+|++++||+|+.||+|+|||+.+.+ ++..+.+|.
T Consensus 146 l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~---------------------------~~~~~~~h~------ 192 (410)
T 1vyh_C 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE---------------------------CIRTMHGHD------ 192 (410)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC---------------------------EEECCCCCS------
T ss_pred EeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---------------------------eeEEEcCCC------
Confidence 34599999999999999999999999999999998765 567788999
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| +|++.+|++++.|++|++||+.++........+ ...+.....++++.++++
T Consensus 193 ------~~V~~v~~--~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 193 ------HNVSSVSI--MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH-------------REWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp ------SCEEEEEE--CSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-------------SSCEEEEEECTTSSEEEE
T ss_pred ------CCEEEEEE--eCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC-------------CccEEEEEECCCCCEEEE
Confidence 89999999 789999999999999999999988766554322 122333445566677777
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC--------------------CCeEEEe-cCCeEEEEEc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--------------------CETFVSA-DDLRINLWNL 246 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--------------------~~~l~~~-~d~~i~lwd~ 246 (409)
++. |+.|++||+.+ ..+...+ .+|...|.+++|+|+ +.+|++| .|+.|++||+
T Consensus 252 ~s~--D~~v~vwd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~ 325 (410)
T 1vyh_C 252 CSN--DQTVRVWVVAT---KECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325 (410)
T ss_dssp EET--TSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEET
T ss_pred EcC--CCeEEEEECCC---CceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEEC
Confidence 765 89999999976 3455555 789999999999996 6789999 9999999999
Q ss_pred cCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccc
Q 015290 247 EISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI 326 (409)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (409)
+ .+.++.. +.+|...|++++|+|++ ++|++|+.||.|++||+++++. ...+ .+|
T Consensus 326 ~-~~~~~~~-------~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~~~~----~~~~-------------~~h 379 (410)
T 1vyh_C 326 S-TGMCLMT-------LVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKNKRC----MKTL-------------NAH 379 (410)
T ss_dssp T-TTEEEEE-------EECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTTSCC----CEEE-------------ECC
T ss_pred C-CCceEEE-------EECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCce----EEEE-------------cCC
Confidence 9 6777666 57899999999999999 9999999999999999987653 2333 345
Q ss_pred ccceeeeEeccCCCEEEEee-cCeEEEEEcc
Q 015290 327 IASISDIKFANDGQHLLSRD-YMNLKLWDIR 356 (409)
Q Consensus 327 ~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~ 356 (409)
...|++++|+|++.+|++|+ |+.|++|+++
T Consensus 380 ~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 77899999999999999998 5999999964
No 30
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=264.80 Aligned_cols=247 Identities=15% Similarity=0.100 Sum_probs=188.4
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|...|.+++|+|++ .|++|+.||+|+|||+.+++.. ......+.+|.
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~-----------------------~~~~~~~~~H~-------- 127 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETL-----------------------IVSKFCKYEHD-------- 127 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSC-----------------------EEEEEEEECCS--------
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCce-----------------------eEeeccccCCC--------
Confidence 356789999999985 6889999999999999987641 11223456888
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC-ceeecc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF-AHGYHL 188 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 188 (409)
+.|++++| +|++++|++++.|++|++||+.+++.......+. ..+..+.+++.. .+++++
T Consensus 128 ----~~V~~v~~--spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~-------------~~V~~~~~~~~~~~~l~s~ 188 (344)
T 4gqb_B 128 ----DIVSTVSV--LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA-------------AQVTCVAASPHKDSVFLSC 188 (344)
T ss_dssp ----SCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-------------SCEEEEEECSSCTTEEEEE
T ss_pred ----CCEEEEEE--CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC-------------CceEEEEecCCCCCceeee
Confidence 89999999 7999999999999999999999988776654322 222333333333 345555
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC-CCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD-CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
+. |+.|++||+++......+. ...+...+.+++|+|+ +++|++| .|+.|++||++ .++.+.. +.+|
T Consensus 189 s~--D~~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~-~~~~~~~-------~~~h 256 (344)
T 4gqb_B 189 SE--DNRILLWDTRCPKPASQIG--CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK-STSCVLS-------SAVH 256 (344)
T ss_dssp ET--TSCEEEEETTSSSCEEECC------CCCEEEEEECSSCTTEEEEEETTSEEEEEESC-C--CCEE-------EECC
T ss_pred cc--ccccccccccccceeeeee--cceeeccceeeeecCCCCcceEEeccCCcEEEEECC-CCcEEEE-------EcCC
Confidence 44 8999999998744332222 1345667899999995 5678888 99999999999 6666665 6889
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC-EEEEe
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLLSR 345 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~sg 345 (409)
...|++++|+|++.++|++|+.|++|++||+++++. ..+ .+|...|++++|+|+++ +|+++
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-----~~~-------------~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-----FRS-------------QAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-----EEE-------------CCCSSCEEEEEECSSSTTEEEEE
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-----EEE-------------cCCCCCEEEEEEeCCCCeEEEEE
Confidence 999999999999856899999999999999988653 112 34678999999999986 56677
Q ss_pred e-cCeEEEEEccC
Q 015290 346 D-YMNLKLWDIRM 357 (409)
Q Consensus 346 ~-~~~v~iwd~~~ 357 (409)
+ |++|++|++.+
T Consensus 319 s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 319 GWDHQVVHHVVPT 331 (344)
T ss_dssp ETTSCEEEEECCC
T ss_pred cCCCeEEEEECCC
Confidence 7 69999999974
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.7e-35 Score=261.01 Aligned_cols=280 Identities=16% Similarity=0.228 Sum_probs=218.5
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeee--cCCCcccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEF--QSHEPEFD 105 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~~~ 105 (409)
...|.+.|++++|+|++++|++++ ||.|++|++.++... ..+..+ .+|.
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~------------------------~~~~~~~~~~~~---- 97 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK------------------------SPVSQLDCLNRD---- 97 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC------------------------SCSEEEECSCTT----
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce------------------------eeeecccccCCC----
Confidence 345899999999999999999999 999999999876531 112222 2566
Q ss_pred ccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 106 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..|.+++| +|++++|++++.|+.|++||+.+++........ .....+....+++++..+
T Consensus 98 --------~~v~~~~~--~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l 156 (337)
T 1gxr_A 98 --------NYIRSCKL--LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT-----------SSAPACYALAISPDSKVC 156 (337)
T ss_dssp --------SBEEEEEE--CTTSSEEEEEESSSEEEEEECCCC--EEEEEEE-----------CSSSCEEEEEECTTSSEE
T ss_pred --------CcEEEEEE--cCCCCEEEEEcCCCcEEEEECCCCCcceeeecc-----------cCCCceEEEEECCCCCEE
Confidence 89999999 789999999999999999999887633222111 112223344455566666
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
+.+.. ++.+++||+++ .+.+..+ ..|...+.+++|+|++++|+++ .|+.|++||++ .+..+..+
T Consensus 157 ~~~~~--dg~v~~~d~~~---~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~~~~~-------- 221 (337)
T 1gxr_A 157 FSCCS--DGNIAVWDLHN---QTLVRQF-QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR-EGRQLQQH-------- 221 (337)
T ss_dssp EEEET--TSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEE--------
T ss_pred EEEeC--CCcEEEEeCCC---Cceeeee-ecccCceEEEEECCCCCEEEEEecCCcEEEEECC-CCceEeee--------
Confidence 66654 88999999976 3455555 7799999999999999999999 99999999998 56555542
Q ss_pred CccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 344 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 344 (409)
.+...+.+++|+|++ ++|++++.++.|++||+++++. ..+ ..|...+.+++|+|++++|++
T Consensus 222 ~~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~~-----~~~-------------~~~~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 222 DFTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPDK-----YQL-------------HLHESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp ECSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSSCE-----EEE-------------CCCSSCEEEEEECTTSSEEEE
T ss_pred cCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCCe-----EEE-------------cCCccceeEEEECCCCCEEEE
Confidence 356789999999999 9999999999999999988653 122 234678999999999999999
Q ss_pred eec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 345 RDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 345 g~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
++. +.|++||+.. ++.+... .|...+ .+++|+|++++|++++.||.|
T Consensus 283 ~~~dg~i~~~~~~~-~~~~~~~-~~~~~v---------------~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 283 TGKDNLLNAWRTPY-GASIFQS-KESSSV---------------LSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp EETTSEEEEEETTT-CCEEEEE-ECSSCE---------------EEEEECTTSCEEEEEETTSCE
T ss_pred ecCCCcEEEEECCC-CeEEEEe-cCCCcE---------------EEEEECCCCCEEEEecCCCeE
Confidence 975 9999999986 6655443 344443 699999999999999999976
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.3e-35 Score=268.02 Aligned_cols=290 Identities=13% Similarity=0.086 Sum_probs=215.0
Q ss_pred cCCCcEEEEEECCCC-CEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 30 QDVDIVSAIEFDKTG-DYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~-~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.|.+.|++++|+|++ ++||+|+.||.|+|||+.+++.. ....+.+|.
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------------~~~~~~~h~------- 118 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT-------------------------SFIQGMGPG------- 118 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE-------------------------EEECCCSTT-------
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc-------------------------eeeecCCcC-------
Confidence 489999999999999 99999999999999999877631 222234688
Q ss_pred cceeccceEEEEEEecC-CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 109 SLEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| +| ++.+|++++.|+.|++||+.+........... ....+..+.++++..+++.
T Consensus 119 -----~~v~~~~~--~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~ 180 (383)
T 3ei3_B 119 -----DAITGMKF--NQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDS-----------WDYWYCCVDVSVSRQMLAT 180 (383)
T ss_dssp -----CBEEEEEE--ETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCC-----------SSCCEEEEEEETTTTEEEE
T ss_pred -----CceeEEEe--CCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCC-----------CCCCeEEEEECCCCCEEEE
Confidence 89999999 67 77899999999999999998755443322111 1122344445566667776
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCC-eEEEe-cCCeEEEEEccCC---CceeeeeecCCCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEIS---DQCFNIVDMKPSN 262 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~---~~~~~~~~~~~~~ 262 (409)
+.. ++.|++||+. .+++..+ .+|...|.+++|+|+++ +++++ .|+.|++||++.. ...+..
T Consensus 181 ~~~--d~~i~i~d~~----~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------- 246 (383)
T 3ei3_B 181 GDS--TGRLLLLGLD----GHEIFKE-KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE------- 246 (383)
T ss_dssp EET--TSEEEEEETT----SCEEEEE-ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE-------
T ss_pred ECC--CCCEEEEECC----CCEEEEe-ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE-------
Confidence 665 8999999984 3555655 78999999999999998 88998 9999999999832 334433
Q ss_pred CcCccCceEEEEEeC-CCCCEEEEEeCCCeEEEEeCCCcccccccccccccccccc----CCcccccccccceeeeEecc
Q 015290 263 MDDLTEVITSAEFHP-IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESH----GSKSFFTEIIASISDIKFAN 337 (409)
Q Consensus 263 ~~~~~~~v~~~~~~p-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~s~ 337 (409)
.+|...|++++|+| ++ .+|++++.|+.|++||+++++.. ..+..|.... ......-.....+..++|+|
T Consensus 247 -~~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~ 320 (383)
T 3ei3_B 247 -MPHEKPVNAAYFNPTDS-TKLLTTDQRNEIRVYSSYDWSKP----DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP 320 (383)
T ss_dssp -EECSSCEEEEEECTTTS-CEEEEEESSSEEEEEETTBTTSC----SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC
T ss_pred -ecCCCceEEEEEcCCCC-CEEEEEcCCCcEEEEECCCCccc----cccccccccccccccceEEeccCCCCceEEEecC
Confidence 25889999999999 98 99999999999999999987642 2232211100 00000000123455677888
Q ss_pred CCCEEEEee-cCeEEEEEccCCCcceEEEeccc--CcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 338 DGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHE--HLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 338 ~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+|++ +|+ |+.|++||+.+ ++++..+.++. ..+ ..++|+|+|++|++|+ ||.|
T Consensus 321 dg~~--s~s~d~~i~iwd~~~-~~~~~~l~~~~~~~~~---------------~~~~~s~~g~~l~s~s-d~~i 375 (383)
T 3ei3_B 321 DDQL--LLNDKRTIDIYDANS-GGLVHQLRDPNAAGII---------------SLNKFSPTGDVLASGM-GFNI 375 (383)
T ss_dssp CTTT--CTTCCCCEEEEETTT-CCEEEEECBTTBCSCC---------------CEEEECTTSSEEEEEE-TTEE
T ss_pred Cccc--ccCCCCeEEEEecCC-CceeeeecCCCCCceE---------------EEEEEecCccEEEEec-CCcE
Confidence 8877 555 59999999986 88888888743 332 3669999999999997 8765
No 33
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-35 Score=259.51 Aligned_cols=244 Identities=16% Similarity=0.170 Sum_probs=196.4
Q ss_pred eeeeecCCCccccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccC
Q 015290 93 YKTEFQSHEPEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKN 172 (409)
Q Consensus 93 ~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (409)
...++.+|. +.|.+++| +|++++|++++.|++|++||+.++........+. ..
T Consensus 5 ~~~~~~~h~------------~~V~~~~f--sp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~-------------~~ 57 (304)
T 2ynn_A 5 IKKTFSNRS------------DRVKGIDF--HPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE-------------TP 57 (304)
T ss_dssp CEEEEEEEC------------SCEEEEEE--CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS-------------SC
T ss_pred eEEeecCCC------------CceEEEEE--CCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC-------------Cc
Confidence 456788898 89999999 7999999999999999999999887665543221 22
Q ss_pred ceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCc
Q 015290 173 FMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ 251 (409)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~ 251 (409)
+..+.+.+++.++++++. |+.|++||+++ ++++..+ .+|...|.+++|+|++++|++| .|++|++||++....
T Consensus 58 v~~~~~~~~~~~l~s~s~--d~~i~vwd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~ 131 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSD--DFRIRVFNYNT---GEKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA 131 (304)
T ss_dssp EEEEEEEGGGTEEEEEET--TSEEEEEETTT---CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE
T ss_pred EEEEEEeCCCCEEEEECC--CCEEEEEECCC---CcEEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc
Confidence 233344455566666665 89999999976 4556665 7899999999999999999999 999999999983334
Q ss_pred eeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccccccee
Q 015290 252 CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASIS 331 (409)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 331 (409)
.... +.+|...|.+++|+|.++.+|++|+.|+.|++||++.+... ..+. .+|...+.
T Consensus 132 ~~~~-------~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~----~~~~------------~~~~~~v~ 188 (304)
T 2ynn_A 132 LEQT-------FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN----FTLT------------TGQERGVN 188 (304)
T ss_dssp EEEE-------ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS----EEEE------------CCCTTCEE
T ss_pred hhhh-------hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc----ceec------------cCCcCcEE
Confidence 4444 67899999999999953389999999999999999875431 1111 12345788
Q ss_pred eeEecc--CCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 332 DIKFAN--DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 332 ~~~~s~--~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
.+.|+| ++++|++|+. +.|++||+++ ++++..+.+|...+ .+++|+|++++|++|+.||+|
T Consensus 189 ~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-~~~~~~~~~h~~~v---------------~~~~~~p~~~~l~s~s~Dg~i 252 (304)
T 2ynn_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLEGHMSNV---------------SFAVFHPTLPIIISGSEDGTL 252 (304)
T ss_dssp EEEECCSTTCCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCE---------------EEEEECSSSSEEEEEETTSCE
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEeCCC-CccceeeCCCCCCE---------------EEEEECCCCCEEEEEcCCCeE
Confidence 888876 7789999975 9999999986 88999999998876 689999999999999999986
No 34
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-35 Score=268.57 Aligned_cols=286 Identities=17% Similarity=0.176 Sum_probs=219.4
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
|.+.|++++|+|++++||+|+.||.|++||. ++. .+..+.+|.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~~---------------------------~~~~~~~~~--------- 149 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TGA---------------------------LLNVLNFHR--------- 149 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEET-TSC---------------------------EEEEECCCC---------
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCC---------------------------eeeeccCCC---------
Confidence 6789999999999999999999999999993 332 456778888
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcc--cccccccccccCceeccCCCCCceeecc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPF--VSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+++| +|++++|++++.|+.|++||+.+++............ +...........+..+.+.++.. ++.+
T Consensus 150 ---~~v~~~~~--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 223 (425)
T 1r5m_A 150 ---APIVSVKW--NKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIP 223 (425)
T ss_dssp ---SCEEEEEE--CTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEE
T ss_pred ---ccEEEEEE--CCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEE
Confidence 89999999 7899999999999999999999887766554332211 00000000011122222233333 3333
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
.. ++.+++|++... +.+..+ ..|...|.+++|+|++++|+++ .|+.|++||++ .+..... +..|.
T Consensus 224 ~~--~g~i~~~d~~~~---~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-------~~~~~ 289 (425)
T 1r5m_A 224 GP--KGAIFVYQITEK---TPTGKL-IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG-NGNSQNC-------FYGHS 289 (425)
T ss_dssp CG--GGCEEEEETTCS---SCSEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS-SBSCSEE-------ECCCS
T ss_pred cC--CCeEEEEEcCCC---ceeeee-ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC-CCccceE-------ecCCC
Confidence 32 889999999863 444444 6899999999999999999999 99999999998 5555555 56788
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec
Q 015290 268 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
..|.+++|+|++ ++++++.|+.|++||+++++. ...+. .|...+.+++|+|++++|++++.
T Consensus 290 ~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~----~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 290 QSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTL----LALSI-------------VDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp SCEEEEEEETTT--EEEEEETTSEEEEEETTTTEE----EEEEE-------------CTTCCEEEEEECTTSSEEEEEET
T ss_pred ccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcE----eEecc-------------cCCccEEEEEEcCCCCEEEEEEC
Confidence 999999999987 899999999999999988653 22222 34578999999999999999975
Q ss_pred -CeEEEEEccCCCc--------------------ceEEEecccC--cccccccccCCCCccceeeEEEcCCCCeEEEccc
Q 015290 348 -MNLKLWDIRMDST--------------------PVATFKIHEH--LRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY 404 (409)
Q Consensus 348 -~~v~iwd~~~~~~--------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~ 404 (409)
+.|++||++. ++ ++..+.+|.. .+ .+++|+|++++|++++.
T Consensus 351 dg~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------------~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 351 DGQVNVYDLKK-LNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYI---------------FDLSWNCAGNKISVAYS 414 (425)
T ss_dssp TSCEEEEECHH-HHC--------------CEECCEEEEECCTTCCCCE---------------EEEEECTTSSEEEEEES
T ss_pred CCeEEEEECCC-CccceeeeecccccccCcccchhhhhhcCcccCCce---------------EEEEccCCCceEEEEec
Confidence 9999999986 55 6777777754 43 69999999999999999
Q ss_pred CCCC
Q 015290 405 RRDN 408 (409)
Q Consensus 405 dg~i 408 (409)
||.|
T Consensus 415 dg~i 418 (425)
T 1r5m_A 415 LQEG 418 (425)
T ss_dssp SSCC
T ss_pred CceE
Confidence 9987
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-36 Score=273.35 Aligned_cols=317 Identities=11% Similarity=0.071 Sum_probs=223.5
Q ss_pred ccceeeehhccCCCCCccccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCc
Q 015290 11 SLEWKCSQAFGERNPDEELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPE 90 (409)
Q Consensus 11 ~~~w~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (409)
-..|.+...-.. .......|...|++++|+|++++||+|+.||.|++|++.+... .
T Consensus 47 v~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~-----------------------~ 102 (416)
T 2pm9_A 47 LELWSLLAADSE-KPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANN-----------------------A 102 (416)
T ss_dssp CEEEESSSGGGC-SCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTS-----------------------C
T ss_pred EEEEEccCCCCC-cEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccc-----------------------c
Confidence 345665432111 2344556899999999999999999999999999999987321 1
Q ss_pred eeeeeeecCCCccccccccceeccceEEEEEEecCC-CCEEEEEeCCCeEEEEEcCCce------eeeeeccCCCccccc
Q 015290 91 YRYKTEFQSHEPEFDYLKSLEIEEKINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQK------VKKIKEMDHFPFVSS 163 (409)
Q Consensus 91 ~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~~s~~-~~~l~s~~~d~~i~iwd~~~~~------~~~~~~~~~~~~~~~ 163 (409)
.+.+..+.+|. ..|.+++| +|+ +.+|++++.|+.|++||+.+++ ......
T Consensus 103 ~~~~~~~~~h~------------~~v~~~~~--~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--------- 159 (416)
T 2pm9_A 103 INSMARFSNHS------------SSVKTVKF--NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG--------- 159 (416)
T ss_dssp CCEEEECCCSS------------SCCCEEEE--CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC---------
T ss_pred ccchhhccCCc------------cceEEEEE--cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccc---------
Confidence 12566788898 89999999 677 8899999999999999998775 211110
Q ss_pred ccccccccCceeccCCCC-CceeecccccccceeEEEecCCcccceeeeeecccc------ccceeEEEeCCCC-CeEEE
Q 015290 164 ENTLLAEKNFMNEHNPPS-FAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAH------DFNINSISNNSDC-ETFVS 235 (409)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~v~~l~~~~~~-~~l~~ 235 (409)
........+..+.+++. ..+++.+.. ++.|++||++.. +++..+ ..+ ...|.+++|+|++ .++++
T Consensus 160 -~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~---~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 160 -QSMSSVDEVISLAWNQSLAHVFASAGS--SNFASIWDLKAK---KEVIHL-SYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp -CSCCSSCCCCEEEECSSCTTEEEEESS--SSCEEEEETTTT---EEEEEE-CCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred -cccCCCCCeeEEEeCCCCCcEEEEEcC--CCCEEEEECCCC---CcceEE-eccccccccCCceEEEEECCCCCCEEEE
Confidence 00111223334444554 455666554 899999999873 444444 333 7889999999997 57888
Q ss_pred e-cCC---eEEEEEccCCCceeeeeecCCCcCc-CccCceEEEEEeC-CCCCEEEEEeCCCeEEEEeCCCcccccccccc
Q 015290 236 A-DDL---RINLWNLEISDQCFNIVDMKPSNMD-DLTEVITSAEFHP-IYCNLLAYSSSRGFVRLVDMRQSALCDHSARI 309 (409)
Q Consensus 236 ~-~d~---~i~lwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 309 (409)
+ .|+ .|++||++........ +. +|...|.+++|+| ++ .+|++++.||.|++||+++++. +..
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd~~~~~~----~~~ 300 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTPLQT-------LNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWNPESAEQ----LSQ 300 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSCSBC-------CCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEECSSSCCE----EEE
T ss_pred EECCCCCceEEEEeCCCCCCCcEE-------eecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEeeCCCCcc----cee
Confidence 8 888 9999999943344444 56 7999999999999 77 9999999999999999988653 233
Q ss_pred ccccccccCCcccccccccceeeeEeccCC-CEEEEee-cCeEEEEEccCCCcceEEEe--------------c------
Q 015290 310 LRDAAESHGSKSFFTEIIASISDIKFANDG-QHLLSRD-YMNLKLWDIRMDSTPVATFK--------------I------ 367 (409)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~sg~-~~~v~iwd~~~~~~~~~~~~--------------~------ 367 (409)
+ .+|...|.+++|+|++ ++|++++ |+.|++||+.. ........ .
T Consensus 301 ~-------------~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (416)
T 2pm9_A 301 F-------------PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN-LTNTLDEQETETKQQESETDFWNNVSREE 366 (416)
T ss_dssp E-------------ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC-CCCSSCC----------------------
T ss_pred e-------------cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC-CCCCcccccccccccCCcccccccccccc
Confidence 3 3346789999999999 8999987 49999999975 32211110 0
Q ss_pred ccCcccccccccCCC-CccceeeEEEcCCCCeEEEcccCCCC
Q 015290 368 HEHLRPKLCDLYNND-SIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 368 ~~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
|...+... .+.... ....+.+++|+|||++|++++.||+|
T Consensus 367 ~~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v 407 (416)
T 2pm9_A 367 SKEKPSVF-HLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGV 407 (416)
T ss_dssp CCSCCCSS-CCCCCSTTCCCSCCCEEETTTEEECBCTTSSCB
T ss_pred cccccccc-cccCCccccCCccceEEeeCCeEEEEeCCCCeE
Confidence 11100000 000000 01123589999999999999999987
No 36
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.4e-35 Score=263.87 Aligned_cols=297 Identities=10% Similarity=0.091 Sum_probs=210.1
Q ss_pred CCcEEEEEECCCCCEEEEEecCC-------eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccc
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGG-------RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEF 104 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg-------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 104 (409)
.-+|++++|+||+++||+|+.+. .|++|++...... ....+. ......+.+|+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~-----~~~~~~------------~~~~~~l~~~~--- 73 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDT-----EKEQFH------------ILSEFALEDND--- 73 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSS-----HHHHEE------------EEEEEECCTTS---
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcc-----eeeeee------------eeeEEEccCCC---
Confidence 34899999999999999997543 5999999866531 011110 00113466777
Q ss_pred cccccceeccceEEEEEEecCCCCEEEEE-----------eCCCeEEEEEcCCceee--eeeccCCCccccccccccccc
Q 015290 105 DYLKSLEIEEKINRVRWCAAPNGSMFILS-----------TNDKTIKLWKVRDQKVK--KIKEMDHFPFVSSENTLLAEK 171 (409)
Q Consensus 105 ~~~~~~~~~~~v~~l~~~~s~~~~~l~s~-----------~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 171 (409)
..|.++++ ++..++++ +.|+++++|++...... ........ .....+.
T Consensus 74 ---------~~v~s~~~----~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 134 (365)
T 4h5i_A 74 ---------DSPTAIDA----SKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFD------ASTNADD 134 (365)
T ss_dssp ---------CCCCEEEE----ETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSS------CCCCTTC
T ss_pred ---------CceEEEEe----CCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeecee------ecCCccc
Confidence 78888887 34466655 45778999988654321 11111100 0011122
Q ss_pred CceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCc
Q 015290 172 NFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQ 251 (409)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~ 251 (409)
....+.+++++.+++.++...|++|++||+++ .+++..+ .|...|.+++|+|+|++++++.++.+.+|+.. .+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~---~~~~~~~--~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~-~~~ 208 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSD---LTEKFEI--ETRGEVKDLHFSTDGKVVAYITGSSLEVISTV-TGS 208 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTT---TEEEEEE--ECSSCCCEEEECTTSSEEEEECSSCEEEEETT-TCC
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCC---CcEEEEe--CCCCceEEEEEccCCceEEeccceeEEEEEec-cCc
Confidence 33455677888887766666689999999986 4445444 47788999999999999999955566677766 343
Q ss_pred eeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCC----eEEEEeCCCccccccccccccccccccCCcccccccc
Q 015290 252 CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG----FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 327 (409)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (409)
..... ....|...|.+++|+|++ +++++++.|+ .+++||+...... .... ..+.+|.
T Consensus 209 ~~~~~-----~~~~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~-----~~~~--------~~~~~~~ 269 (365)
T 4h5i_A 209 CIARK-----TDFDKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTS-----VLRS--------KQVTNRF 269 (365)
T ss_dssp EEEEE-----CCCCTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEE-----EEEE--------EEEESSC
T ss_pred ceeee-----ecCCCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceec-----ceee--------eeecCCC
Confidence 33221 156788899999999999 9999998887 6888988765421 1110 1134557
Q ss_pred cceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEE-ecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 328 ASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF-KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 328 ~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
..|++++|+|||++||+|+. +.|+|||+++ ++++..+ .+|...+ ++++|||||++|||||.|
T Consensus 270 ~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V---------------~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAI---------------TEVTISPDSTYVASVSAA 333 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEETTSSSSCE---------------EEEEECTTSCEEEEEETT
T ss_pred CCeEeEEECCCCCceEEEcCCCEEEEEECCC-CcEEEEecCcccCCE---------------EEEEECCCCCEEEEEeCC
Confidence 78999999999999999975 9999999986 8888876 6888876 799999999999999999
Q ss_pred CCC
Q 015290 406 RDN 408 (409)
Q Consensus 406 g~i 408 (409)
++|
T Consensus 334 ~tv 336 (365)
T 4h5i_A 334 NTI 336 (365)
T ss_dssp SEE
T ss_pred CeE
Confidence 986
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.4e-36 Score=267.67 Aligned_cols=304 Identities=13% Similarity=0.115 Sum_probs=216.6
Q ss_pred cCCCcEEEEEECCC----CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccc
Q 015290 30 QDVDIVSAIEFDKT----GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFD 105 (409)
Q Consensus 30 ~h~~~v~~v~~~~~----~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 105 (409)
+|.+.|++++|+|+ ...+++++.++.|++||+.+++. +..+..|..
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~---------------------------~~~~~~~~~--- 65 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGE---------------------------IRLLQSYVD--- 65 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGC---------------------------EEEEEEEEC---
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcE---------------------------EEeeeeccc---
Confidence 48999999999984 44566666677999999987653 222222210
Q ss_pred ccccceeccceEEEEEEecCC--CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCC-CC
Q 015290 106 YLKSLEIEEKINRVRWCAAPN--GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP-SF 182 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (409)
..+...|.+++|.|... +.+|++++.|+.|++||+.+++.......+ ...+..+.+++ +.
T Consensus 66 ----~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~ 128 (366)
T 3k26_A 66 ----ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGH-------------GNAINELKFHPRDP 128 (366)
T ss_dssp ----SCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESC-------------CSCEEEEEECSSCT
T ss_pred ----cCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCC-------------CCcEEEEEECCCCC
Confidence 00117899999954221 679999999999999999988766554321 22333444455 55
Q ss_pred ceeecccccccceeEEEecCCcccceeeeee--ccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeec-
Q 015290 183 AHGYHLEWTENMATKIANVGNSVHARCQKVY--PHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDM- 258 (409)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~- 258 (409)
.+++++.. ++.|++||+... +.+..+ +.+|...|.+++|+|++++|+++ .|+.|++||++ .+.....+..
T Consensus 129 ~~l~s~~~--dg~i~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~ 202 (366)
T 3k26_A 129 NLLLSVSK--DHALRLWNIQTD---TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN-SKRMMNAIKES 202 (366)
T ss_dssp TEEEEEET--TSCEEEEETTTT---EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC-SHHHHHHHHHH
T ss_pred CEEEEEeC--CCeEEEEEeecC---eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC-CCcccccccee
Confidence 66666655 899999999874 333332 15799999999999999999999 99999999998 4433222110
Q ss_pred --------------------CCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccC
Q 015290 259 --------------------KPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHG 318 (409)
Q Consensus 259 --------------------~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 318 (409)
.......|...|.+++|+ + .+|++++.|+.|++||+++..... ..+..+.....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~---~~~~~~~~~~~ 276 (366)
T 3k26_A 203 YDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDI---DKIKPSESNVT 276 (366)
T ss_dssp HTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCG---GGCCTTCCCEE
T ss_pred EEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccc---cccccCCcchh
Confidence 000123488999999999 5 799999999999999998865321 11111111112
Q ss_pred CcccccccccceeeeEeccC--CCEEEEeec-CeEEEEEccCCCc----ceEEEecc--cCcccccccccCCCCccceee
Q 015290 319 SKSFFTEIIASISDIKFAND--GQHLLSRDY-MNLKLWDIRMDST----PVATFKIH--EHLRPKLCDLYNNDSIFDKFE 389 (409)
Q Consensus 319 ~~~~~~~~~~~i~~~~~s~~--g~~l~sg~~-~~v~iwd~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~ 389 (409)
....+..|...|.+++|+|+ +++|++|+. +.|++||+.. ++ ....+.+| ...+ ++
T Consensus 277 ~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v---------------~~ 340 (366)
T 3k26_A 277 ILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV-EDPHKAKCTTLTHHKCGAAI---------------RQ 340 (366)
T ss_dssp EEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS-SSGGGCEEEEECCTTCCSCE---------------EE
T ss_pred eeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC-CCCccccceEEcccccCCce---------------EE
Confidence 23345677889999999999 999999975 9999999986 44 33466666 3443 69
Q ss_pred EEEcCCCCeEEEcccCCCC
Q 015290 390 CSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 390 ~~~spdg~~l~s~s~dg~i 408 (409)
++|+|++++|++++.||.|
T Consensus 341 ~~~s~~~~~l~s~~~dg~i 359 (366)
T 3k26_A 341 TSFSRDSSILIAVCDDASI 359 (366)
T ss_dssp EEECTTSSEEEEEETTSEE
T ss_pred EEeCCCCCeEEEEeCCCEE
Confidence 9999999999999999976
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.5e-35 Score=267.44 Aligned_cols=302 Identities=11% Similarity=0.110 Sum_probs=220.8
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|.+.|++++|+| ++||+|+.||.|++|++.+++.. ..+..+..+.+|.
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~---------------------~~~~~~~~~~~h~-------- 62 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE---------------------NPKDKSYSHFVHK-------- 62 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC---------------------CGGGGEEEEECCT--------
T ss_pred hhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc---------------------cCCCcceEEecCC--------
Confidence 4999999999998 79999999999999999876521 0123456777888
Q ss_pred ceeccceEEEEEEecCC----C---CEEEEEeCCCeEEEEEcCCcee-----eeeeccCCCcccccccccccccCceecc
Q 015290 110 LEIEEKINRVRWCAAPN----G---SMFILSTNDKTIKLWKVRDQKV-----KKIKEMDHFPFVSSENTLLAEKNFMNEH 177 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~----~---~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (409)
..|.+++| +++ + .+|++++.|+.|++||+.+++. ......+... .....+..+.
T Consensus 63 ----~~v~~~~~--~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~ 128 (397)
T 1sq9_A 63 ----SGLHHVDV--LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSD--------MKKHSFWALK 128 (397)
T ss_dssp ----TCEEEEEE--EEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTT--------GGGSCEEEEE
T ss_pred ----CcEEEEEE--ecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccc--------cCCCcEEEEE
Confidence 89999999 567 8 8999999999999999987764 3322211100 0013333444
Q ss_pred CC----CCCce-eecccccccceeEEEecCC------cccce--eeeeec------cccccceeEEEeCCCCCeEEEe-c
Q 015290 178 NP----PSFAH-GYHLEWTENMATKIANVGN------SVHAR--CQKVYP------HAHDFNINSISNNSDCETFVSA-D 237 (409)
Q Consensus 178 ~~----~~~~~-~~~~~~~~~~~i~~~~~~~------~~~~~--~~~~~~------~~~~~~v~~l~~~~~~~~l~~~-~ 237 (409)
++ +.+.. ++.+.. ++.|++||+.. ..... +...+. ..|...|.+++|+|++ .++++ .
T Consensus 129 ~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~ 205 (397)
T 1sq9_A 129 WGASNDRLLSHRLVATDV--KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN 205 (397)
T ss_dssp EECCC----CEEEEEEET--TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT
T ss_pred EeeccCCCCceEEEEEeC--CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC
Confidence 44 55555 666654 89999999976 32222 000221 3478899999999999 99999 9
Q ss_pred CCeEEEEEccCCCceeeeeecCCCcCcC---c---cCceEEEEEeCCCCCEEEEEeCC---CeEEEEeCCCccccccccc
Q 015290 238 DLRINLWNLEISDQCFNIVDMKPSNMDD---L---TEVITSAEFHPIYCNLLAYSSSR---GFVRLVDMRQSALCDHSAR 308 (409)
Q Consensus 238 d~~i~lwd~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~p~~~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~ 308 (409)
|+.|++||++ .+..+.. +.. | ...|.+++|+|++ .+|++++.| |.|++||+++++. +.
T Consensus 206 dg~i~i~d~~-~~~~~~~-------~~~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~~~----~~ 272 (397)
T 1sq9_A 206 NGTVQISELS-TLRPLYN-------FESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETEFGER----IG 272 (397)
T ss_dssp TSEEEEEETT-TTEEEEE-------EECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETTTCCE----EE
T ss_pred CCcEEEEECC-CCceeEE-------EeccccccccCCccceEEECCCC-CEEEEEecCCCCceEEEEECCCCcc----cc
Confidence 9999999999 6666655 455 7 8899999999999 999999999 9999999988653 12
Q ss_pred cccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEe------cc-------------
Q 015290 309 ILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFK------IH------------- 368 (409)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~------~~------------- 368 (409)
.+...............|...|.+++|+|++++|++++. +.|++||+++ ++++..+. +|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (397)
T 1sq9_A 273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT-KERITTLNMHCDDIEIEEDILAVDEHGDS 351 (397)
T ss_dssp EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-TEEEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC-CceeEEEecccCcccchhhhhcccccccc
Confidence 222200000000001126789999999999999999974 9999999986 88888888 66
Q ss_pred --cCcccccccccCCCCccceeeEEEcCCC----------CeEEEcccCCCC
Q 015290 369 --EHLRPKLCDLYNNDSIFDKFECSVSGDG----------LHFATGSYRRDN 408 (409)
Q Consensus 369 --~~~~~~~~~~~~~~~~~~v~~~~~spdg----------~~l~s~s~dg~i 408 (409)
... |.+++|+|+| ++|++++.||.|
T Consensus 352 ~~~~~---------------v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i 388 (397)
T 1sq9_A 352 LAEPG---------------VFDVKFLKKGWRSGMGADLNESLCCVCLDRSI 388 (397)
T ss_dssp CSSCC---------------EEEEEEECTTTSBSTTCTTSCEEEEEETTTEE
T ss_pred ccCCc---------------eeEEEeccccccccccccccceEEEecCCCcE
Confidence 333 3799999998 799999999976
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-36 Score=273.59 Aligned_cols=251 Identities=12% Similarity=0.099 Sum_probs=187.2
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
+.++|++++|+|++++||+|+.||.|+|||+.++. ++.+..+.+|.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~-------------------------~~~~~~~~~h~--------- 55 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG-------------------------WKHARTFSDHD--------- 55 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE-------------------------EEECCCBCCCS---------
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc-------------------------eEEEEEEecCC---------
Confidence 46789999999999999999999999999998762 12456788898
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCce-eeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK-VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
+.|.+++| +|++++|++++.|++|++||+.++. ....... ......+..+.+++++..++.+.
T Consensus 56 ---~~v~~~~~--s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~~~~ 119 (377)
T 3dwl_C 56 ---KIVTCVDW--APKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL-----------LRLNRAATFVRWSPNEDKFAVGS 119 (377)
T ss_dssp ---SCEEEEEE--CTTTCCEEEEETTSSEEEC------CCCCEEEC-----------CCCSSCEEEEECCTTSSCCEEEE
T ss_pred ---ceEEEEEE--eCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe-----------cccCCceEEEEECCCCCEEEEEe
Confidence 89999999 7899999999999999999998876 2111111 11223445555666667777766
Q ss_pred ccccceeEEEecCCcccceeeeeeccc-cccceeEEEeCCCCCeEEEe-cCCeEEEEEccCC-----------------C
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHA-HDFNINSISNNSDCETFVSA-DDLRINLWNLEIS-----------------D 250 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~-----------------~ 250 (409)
. ++.|++||++......+.+.+ .. |...|.+++|+|++++|+++ .|+.|++||++.. +
T Consensus 120 ~--d~~i~iwd~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 196 (377)
T 3dwl_C 120 G--ARVISVCYFEQENDWWVSKHL-KRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFN 196 (377)
T ss_dssp S--SSCEEECCC-----CCCCEEE-CSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEE
T ss_pred c--CCeEEEEEECCcccceeeeEe-ecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchh
Confidence 5 899999999875544455655 45 99999999999999999999 9999999998521 1
Q ss_pred ceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccce
Q 015290 251 QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 330 (409)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 330 (409)
..+. .+ +|...|++++|+|++ ++|++++.||.|++||+++++.....+.. +.+|...|
T Consensus 197 ~~~~-------~~-~~~~~v~~~~~sp~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~v 254 (377)
T 3dwl_C 197 TVCA-------EY-PSGGWVHAVGFSPSG-NALAYAGHDSSVTIAYPSAPEQPPRALIT-------------VKLSQLPL 254 (377)
T ss_dssp EEEE-------CC-CCSSSEEEEEECTTS-SCEEEEETTTEEC-CEECSTTSCEEECCC-------------EECSSSCE
T ss_pred hhhh-------cc-cCCceEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCCcceeeEe-------------ecCCCCce
Confidence 1221 14 789999999999999 99999999999999999987531111122 34557789
Q ss_pred eeeEeccCCCEEEEeecCeEEEEEcc
Q 015290 331 SDIKFANDGQHLLSRDYMNLKLWDIR 356 (409)
Q Consensus 331 ~~~~~s~~g~~l~sg~~~~v~iwd~~ 356 (409)
.+++|+|+|++|++|+++.+.+|+..
T Consensus 255 ~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 255 RSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EEEEEEETTEEEEEESSSSEEEECCC
T ss_pred EEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 99999999999999988666688765
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=256.46 Aligned_cols=264 Identities=14% Similarity=0.262 Sum_probs=196.9
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|...|.+++|+|++++||+|+.|+.|+||+...+. .+.+..+.+|.
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-------------------------~~~~~~~~~h~------- 105 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-------------------------FECVTTLEGHE------- 105 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC--------------------------EEEEEEECCCS-------
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-------------------------eEEEEEccCCC-------
Confidence 3599999999999999999999999999999987653 23567889999
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeee-eeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKK-IKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
+.|.+++| +|++++|++++.|++|++||+.++.... ..... .....+..+.+++++.++++
T Consensus 106 -----~~v~~v~~--sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-----------~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 106 -----NEVKSVAW--APSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-----------SHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp -----SCEEEEEE--CTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-----------CCCSCEEEEEECSSSSCEEE
T ss_pred -----CCceEEEE--eCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-----------CcCCCeEEEEECCCCCEEEE
Confidence 89999999 7999999999999999999998654321 11110 11223444556677777777
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCc--------------e
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ--------------C 252 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~--------------~ 252 (409)
++. |+.|++|+.+... ..+...+ .+|...|.+++|+|++++|+++ .|++|++||....+. +
T Consensus 168 ~s~--d~~i~~w~~~~~~-~~~~~~~-~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 168 ASY--DDTVKLYREEEDD-WVCCATL-EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp EET--TSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EeC--CCcEEEEEecCCC-EEEEEEe-cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 765 8999999987532 1233444 7899999999999999999999 999999999752221 1
Q ss_pred eeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceee
Q 015290 253 FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 332 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 332 (409)
+..+ ...|...|++++|+|++ ..|++++.|+.|++|+...+.........+.. ....+|...|++
T Consensus 244 ~~~~------~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~--------~~~~~h~~~V~~ 308 (345)
T 3fm0_A 244 ICTL------SGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQPTFSLTA--------HLHQAHSQDVNC 308 (345)
T ss_dssp EEEE------CSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTSCCEEEEE--------EETTSSSSCEEE
T ss_pred eEEe------cCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEe--------eecccccCcEeE
Confidence 1111 12388899999999999 99999999999999998765321110000111 113467889999
Q ss_pred eEeccCC-CEEEEeec-CeEEEEEccCCCcce
Q 015290 333 IKFANDG-QHLLSRDY-MNLKLWDIRMDSTPV 362 (409)
Q Consensus 333 ~~~s~~g-~~l~sg~~-~~v~iwd~~~~~~~~ 362 (409)
++|+|++ .+||+|++ +.|++|++.. ++.+
T Consensus 309 v~~~p~~~~~laS~s~Dg~v~~W~~~~-~~~~ 339 (345)
T 3fm0_A 309 VAWNPKEPGLLASCSDDGEVAFWKYQR-PEGL 339 (345)
T ss_dssp EEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred eEEeCCCceEEEEcCCCCcEEEEEecC-CCCc
Confidence 9999998 58999974 9999999985 4443
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-35 Score=269.05 Aligned_cols=290 Identities=13% Similarity=0.185 Sum_probs=219.0
Q ss_pred CCCcEEEEEECCCCC-EEEEE----------ecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecC
Q 015290 31 DVDIVSAIEFDKTGD-YLAVG----------DRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQS 99 (409)
Q Consensus 31 h~~~v~~v~~~~~~~-~la~~----------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (409)
+...|.+++|+|+++ +||+| +.||.|+|||+.++... +.+.. ..
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~------------------------~~~~~-~~ 65 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE------------------------KPIAS-LQ 65 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC------------------------SCSCC-CC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC------------------------cEEEE-Ee
Confidence 456789999999987 99999 88999999999876520 01112 23
Q ss_pred CCccccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCC----ceeeeeeccCCCcccccccccccccCcee
Q 015290 100 HEPEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRD----QKVKKIKEMDHFPFVSSENTLLAEKNFMN 175 (409)
Q Consensus 100 h~~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (409)
|. ..|.+++| +|++++|++++.|+.|++||+.+ .+...... .+. ..+..
T Consensus 66 ~~------------~~v~~~~~--s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h~------------~~v~~ 118 (416)
T 2pm9_A 66 VD------------SKFNDLDW--SHNNKIIAGALDNGSLELYSTNEANNAINSMARFS-NHS------------SSVKT 118 (416)
T ss_dssp CS------------SCEEEEEE--CSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-CSS------------SCCCE
T ss_pred cC------------CceEEEEE--CCCCCeEEEEccCCeEEEeecccccccccchhhcc-CCc------------cceEE
Confidence 55 79999999 79999999999999999999987 22222221 112 22333
Q ss_pred ccCCCC-CceeecccccccceeEEEecCCcc------cceeeeeeccccccceeEEEeCCC-CCeEEEe-cCCeEEEEEc
Q 015290 176 EHNPPS-FAHGYHLEWTENMATKIANVGNSV------HARCQKVYPHAHDFNINSISNNSD-CETFVSA-DDLRINLWNL 246 (409)
Q Consensus 176 ~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~-~d~~i~lwd~ 246 (409)
+.++++ ..+++++.. ++.|++||+.... ....... ...|...|.+++|+|+ +.+|+++ .|+.|++||+
T Consensus 119 ~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 195 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGN--NGEIFIWDMNKCTESPSNYTPLTPGQ-SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDL 195 (416)
T ss_dssp EEECSSSTTBEEEECS--SSCEEBCBTTTTSSCTTTCCCBCCCC-SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEET
T ss_pred EEEcCCCCCEEEEEcC--CCeEEEEECCCCcccccccccccccc-ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEEC
Confidence 334444 455665554 8999999998754 2222222 2578999999999999 7889999 9999999999
Q ss_pred cCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCC---eEEEEeCCCccccccccccccccccccCCcccc
Q 015290 247 EISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG---FVRLVDMRQSALCDHSARILRDAAESHGSKSFF 323 (409)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (409)
+ .+..+..+... ....+|...+.+++|+|++..+|++++.|+ .|++||++++... ...+.
T Consensus 196 ~-~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~---~~~~~------------ 258 (416)
T 2pm9_A 196 K-AKKEVIHLSYT-SPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP---LQTLN------------ 258 (416)
T ss_dssp T-TTEEEEEECCC-CCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC---SBCCC------------
T ss_pred C-CCCcceEEecc-ccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC---cEEee------------
Confidence 9 56665553211 011234788999999999757999999998 9999999885321 12222
Q ss_pred cccccceeeeEecc-CCCEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCC-CeEE
Q 015290 324 TEIIASISDIKFAN-DGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG-LHFA 400 (409)
Q Consensus 324 ~~~~~~i~~~~~s~-~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~l~ 400 (409)
.+|...|.+++|+| ++++|++++ |+.|++||+++ ++++..+.+|...+ .+++|+|++ .+|+
T Consensus 259 ~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v---------------~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 259 QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWC---------------FKTKFAPEAPDLFA 322 (416)
T ss_dssp SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEECSSSCC---------------CCEEECTTCTTEEE
T ss_pred cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecCCCCce---------------EEEEECCCCCCEEE
Confidence 04567899999999 899999997 49999999986 88999999988876 599999999 8999
Q ss_pred EcccCCCC
Q 015290 401 TGSYRRDN 408 (409)
Q Consensus 401 s~s~dg~i 408 (409)
+++.||.|
T Consensus 323 s~~~d~~i 330 (416)
T 2pm9_A 323 CASFDNKI 330 (416)
T ss_dssp ECCSSSEE
T ss_pred EEecCCcE
Confidence 99999975
No 42
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.4e-34 Score=254.29 Aligned_cols=244 Identities=18% Similarity=0.270 Sum_probs=197.2
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|...|.+++|+|++++||+|+.|+.|++|++.+... ..+....+.+|.
T Consensus 95 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~-----------------------~~~~~~~~~~h~-------- 143 (340)
T 1got_B 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG-----------------------NVRVSRELAGHT-------- 143 (340)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB-----------------------SCEEEEEEECCS--------
T ss_pred cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC-----------------------cceeEEEecCCC--------
Confidence 3788999999999999999999999999999986542 233556788998
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
+.|.++.| ++++ .+++++.|++|++||+.+++.......+ .+.+..+.+++++.++++++
T Consensus 144 ----~~v~~~~~--~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 144 ----GYLSCCRF--LDDN-QIVTSSGDTTCALWDIETGQQTTTFTGH-------------TGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp ----SCEEEEEE--EETT-EEEEEETTSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTSSEEEEEE
T ss_pred ----ccEEEEEE--CCCC-cEEEEECCCcEEEEECCCCcEEEEEcCC-------------CCceEEEEECCCCCEEEEEe
Confidence 89999999 4555 6999999999999999988776554322 22344455566667777766
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccC
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 268 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 268 (409)
. |+.|++||+.. ..+...+ .+|...|.+++|+|++++|++| .|++|++||++ ....+..+. ...+..
T Consensus 204 ~--d~~v~~wd~~~---~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~-----~~~~~~ 271 (340)
T 1got_B 204 C--DASAKLWDVRE---GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLR-ADQELMTYS-----HDNIIC 271 (340)
T ss_dssp T--TSCEEEEETTT---CSEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEEC-----CTTCCS
T ss_pred C--CCcEEEEECCC---CeeEEEE-cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC-CCcEEEEEc-----cCCccc
Confidence 5 99999999976 4555665 7899999999999999999999 99999999998 555554421 233446
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y 347 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~ 347 (409)
.|++++|+|++ ++|++|+.|+.|++||+.+++. ... +.+|...|.+++|+|+|++|++|+ |
T Consensus 272 ~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~~----~~~-------------~~~h~~~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 272 GITSVSFSKSG-RLLLAGYDDFNCNVWDALKADR----AGV-------------LAGHDNRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp CEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE----EEE-------------EECCSSCEEEEEECTTSSCEEEEETT
T ss_pred ceEEEEECCCC-CEEEEECCCCeEEEEEcccCcE----eeE-------------eecCCCcEEEEEEcCCCCEEEEEcCC
Confidence 79999999999 9999999999999999987643 122 345678999999999999999998 5
Q ss_pred CeEEEEE
Q 015290 348 MNLKLWD 354 (409)
Q Consensus 348 ~~v~iwd 354 (409)
+.|+|||
T Consensus 334 ~~i~iWd 340 (340)
T 1got_B 334 SFLKIWN 340 (340)
T ss_dssp SCEEEEC
T ss_pred ccEEecC
Confidence 9999997
No 43
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-34 Score=258.76 Aligned_cols=253 Identities=14% Similarity=0.113 Sum_probs=184.2
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..+|...|++++|+|++++ ++++.||+|+|||+.+++.. ........+|.
T Consensus 90 ~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~-----------------------~~~~~~~~~h~------ 139 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESL-----------------------LVNKFAKYEHD------ 139 (357)
T ss_dssp EEECSSCEEEEEEETTTEE-EEEETTSCEEEC-------------------------------CCCCEEECCCS------
T ss_pred cCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeecccccee-----------------------EEEeeccCCCC------
Confidence 3458899999999999865 56778999999999876531 00112345777
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC-ceee
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF-AHGY 186 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 186 (409)
+.|++++| +|++++|++++.|++|++||+.+++.......+. ..+.+ +.+++.. .+++
T Consensus 140 ------~~V~~v~~--spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~-~~v~~------------v~~s~~~~~~~~ 198 (357)
T 4g56_B 140 ------DIVKTLSV--FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS-SEVNC------------VAACPGKDTIFL 198 (357)
T ss_dssp ------SCEEEEEE--CSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEE------------EEECTTCSSCEE
T ss_pred ------CCEEEEEE--CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC-CCEEE------------EEEccCCCceee
Confidence 89999999 7999999999999999999999988766654322 12222 2223322 2344
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCC-CeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
+++. |+.|++||+++........ ...+...+.+++|+|++ .+|++| .|+.|++||++ .++.+.. +.
T Consensus 199 s~~~--dg~v~~wd~~~~~~~~~~~--~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~-~~~~~~~-------~~ 266 (357)
T 4g56_B 199 SCGE--DGRILLWDTRKPKPATRID--FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK-NPDSAQT-------SA 266 (357)
T ss_dssp EEET--TSCEEECCTTSSSCBCBCC--CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS-CGGGCEE-------EC
T ss_pred eecc--CCceEEEECCCCceeeeee--eccccccccchhhhhcccceEEEeecccceeEEECC-CCcEeEE-------Ee
Confidence 4433 8999999998744333222 24677889999999984 678888 99999999998 5666655 67
Q ss_pred CccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEecc-CCCEEE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLL 343 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~ 343 (409)
+|...|++++|+|++.++|++|+.|++|+|||+++++.. .. .+|...|++++|+| ++++|+
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~----~~--------------~~H~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF----RD--------------LSHRDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE----EE--------------CCCSSCEEEEEECSSSTTEEE
T ss_pred ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe----EE--------------CCCCCCEEEEEEeCCCCCEEE
Confidence 899999999999998578999999999999999887531 11 23578999999998 799999
Q ss_pred Eee-cCeEEEEEccCCCcc
Q 015290 344 SRD-YMNLKLWDIRMDSTP 361 (409)
Q Consensus 344 sg~-~~~v~iwd~~~~~~~ 361 (409)
+++ |++|++||+...++.
T Consensus 329 s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 329 TVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp EEETTSCEEEEECC-----
T ss_pred EEcCCCeEEEEECCCCCcc
Confidence 987 599999999764433
No 44
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-34 Score=250.01 Aligned_cols=267 Identities=15% Similarity=0.145 Sum_probs=207.9
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
|.+.|++++| |++++||+|+.||.|++||+.++. ....+..|.
T Consensus 17 h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~---------------------------~~~~~~~~~--------- 59 (313)
T 3odt_A 17 HDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW---------------------------LGTVVYTGQ--------- 59 (313)
T ss_dssp CSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE---------------------------EEEEEEECS---------
T ss_pred CCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE---------------------------EEEEeecCC---------
Confidence 8999999999 999999999999999999997665 356677787
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCce---eeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK---VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| +|++++|++++.|+.|++|++.... ...... .....+.++. + +...++.
T Consensus 60 ---~~v~~~~~--~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~------------~--~~~~l~~ 119 (313)
T 3odt_A 60 ---GFLNSVCY--DSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLS------------F--QDGVVIS 119 (313)
T ss_dssp ---SCEEEEEE--ETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEE------------E--ETTEEEE
T ss_pred ---ccEEEEEE--CCCCCEEEEecCCCeEEEEEeeecCCCCcccchh-hcccCEEEEE------------e--cCCEEEE
Confidence 89999999 6899999999999999999987642 111111 1111122222 1 2234444
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
+.. ++.+++||. ......+ ..|...+.+++|+| +++.++++ .|+.|++||.. .....+ ...
T Consensus 120 ~~~--d~~i~~~d~-----~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~------~~~ 182 (313)
T 3odt_A 120 GSW--DKTAKVWKE-----GSLVYNL-QAHNASVWDAKVVSFSENKFLTASADKTIKLWQND---KVIKTF------SGI 182 (313)
T ss_dssp EET--TSEEEEEET-----TEEEEEE-ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT---EEEEEE------CSS
T ss_pred EeC--CCCEEEEcC-----CcEEEec-ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC---ceEEEE------ecc
Confidence 444 889999992 3555555 78999999999988 89999999 99999999944 333332 233
Q ss_pred ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 266 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
|...+.+++|+|++ . +++++.||.|++||+++++. ...+ .+|...|.+++|+|++. |+++
T Consensus 183 ~~~~i~~~~~~~~~-~-~~~~~~dg~i~i~d~~~~~~----~~~~-------------~~~~~~i~~~~~~~~~~-l~~~ 242 (313)
T 3odt_A 183 HNDVVRHLAVVDDG-H-FISCSNDGLIKLVDMHTGDV----LRTY-------------EGHESFVYCIKLLPNGD-IVSC 242 (313)
T ss_dssp CSSCEEEEEEEETT-E-EEEEETTSEEEEEETTTCCE----EEEE-------------ECCSSCEEEEEECTTSC-EEEE
T ss_pred CcccEEEEEEcCCC-e-EEEccCCCeEEEEECCchhh----hhhh-------------hcCCceEEEEEEecCCC-EEEE
Confidence 88899999999998 6 99999999999999988653 2333 33467899999999995 6666
Q ss_pred e-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 346 D-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 346 ~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+ |+.|++||+++ ++++..+..|...+ .+++|+|+++ +++++.||.|
T Consensus 243 ~~dg~v~iwd~~~-~~~~~~~~~~~~~i---------------~~~~~~~~~~-~~~~~~dg~i 289 (313)
T 3odt_A 243 GEDRTVRIWSKEN-GSLKQVITLPAISI---------------WSVDCMSNGD-IIVGSSDNLV 289 (313)
T ss_dssp ETTSEEEEECTTT-CCEEEEEECSSSCE---------------EEEEECTTSC-EEEEETTSCE
T ss_pred ecCCEEEEEECCC-CceeEEEeccCceE---------------EEEEEccCCC-EEEEeCCCcE
Confidence 5 69999999986 88889998888765 6999999998 5678889875
No 45
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=256.94 Aligned_cols=307 Identities=13% Similarity=0.184 Sum_probs=215.3
Q ss_pred ccCCCcEEEEEECC-CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 29 LQDVDIVSAIEFDK-TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 29 ~~h~~~v~~v~~~~-~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..|.+.|++++|+| ++++||+|+.||.|++||+.++.... .+..... .........+|.
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~-------~~~~~~~-------~~~~~~~~~~~~------ 99 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQS-------YYTCKAV-------CSIGRDHPDVHR------ 99 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSS-------CEEECEE-------EEECTTCTTCCS------
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccc-------eEecccc-------ccccccccccCC------
Confidence 34999999999999 99999999999999999999876420 0000000 000000113466
Q ss_pred ccceeccceEEEEEEecC-CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 108 KSLEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
..|.+++| +| ++.+|++++.|+.|++||+.+++........ ..+.++.+. ...+...+++
T Consensus 100 ------~~v~~~~~--~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~ 160 (408)
T 4a11_B 100 ------YSVETVQW--YPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE--ETVYSHHMS---------PVSTKHCLVA 160 (408)
T ss_dssp ------SCEEEEEE--CTTCTTCEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEEC---------SSCSSCCEEE
T ss_pred ------CcEEEEEE--ccCCCcEEEEEeCCCeEEEeeCCCCccceeccCC--CceeeeEee---------cCCCCCcEEE
Confidence 89999999 57 7789999999999999999988776654421 111111111 1122333555
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCe-EEEe-cCCeEEEEEccCCCceeeeeecC-----
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCET-FVSA-DDLRINLWNLEISDQCFNIVDMK----- 259 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~-~d~~i~lwd~~~~~~~~~~~~~~----- 259 (409)
.+.. ++.+++||+.+ .+++..+ .+|...|.+++|+|+++. ++++ .||.|++||++.....+..+...
T Consensus 161 ~~~~--~~~v~~~d~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 161 VGTR--GPKVQLCDLKS---GSCSHIL-QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp EEES--SSSEEEEESSS---SCCCEEE-CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred EEcC--CCeEEEEeCCC---cceeeee-cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 5544 88999999976 3445555 789999999999999985 7788 99999999998444344443111
Q ss_pred ---CCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEec
Q 015290 260 ---PSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA 336 (409)
Q Consensus 260 ---~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 336 (409)
......|...|.+++|+|++ ++|++++.||.|++||+++++.. .....+.... ............
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~~~~~-------~~~~~~~~~~~~ 302 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDG-LHLLTVGTDNRMRLWNSSNGENT----LVNYGKVCNN-------SKKGLKFTVSCG 302 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCBC----CCCCCCCCCC-------CSSCCCCEECCS
T ss_pred eeeccccccccCceeEEEEcCCC-CEEEEecCCCeEEEEECCCCccc----eecccccccc-------ccccceeEEecC
Confidence 11236788999999999999 99999999999999999987642 1111100000 001122223333
Q ss_pred cCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 337 NDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 337 ~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
..+.+++++.++.|++||+.+ ++++..+.+|...+ .+++|+|++++|++++.||.|
T Consensus 303 ~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~~~~~v---------------~~~~~s~~~~~l~s~~~dg~i 358 (408)
T 4a11_B 303 CSSEFVFVPYGSTIAVYTVYS-GEQITMLKGHYKTV---------------DCCVFQSNFQELYSGSRDCNI 358 (408)
T ss_dssp SSSCEEEEEETTEEEEEETTT-CCEEEEECCCSSCE---------------EEEEEETTTTEEEEEETTSCE
T ss_pred CCceEEEEecCCEEEEEECcC-CcceeeeccCCCeE---------------EEEEEcCCCCEEEEECCCCeE
Confidence 344555555679999999986 89999999998876 699999999999999999976
No 46
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.7e-34 Score=256.64 Aligned_cols=290 Identities=11% Similarity=0.066 Sum_probs=211.1
Q ss_pred cCCCcEEEEEECCCCCEE-EEEec---CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccc
Q 015290 30 QDVDIVSAIEFDKTGDYL-AVGDR---GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFD 105 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~l-a~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 105 (409)
+|.+.|++++|+|++..+ ++|+. ||.|+|||+.+++. ......+|.
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~--------------------------~~~~~~~~~---- 65 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL--------------------------KLLREIEKA---- 65 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE--------------------------EEEEEEEES----
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc--------------------------cceeeeccc----
Confidence 389999999999999655 56665 99999999987663 111223566
Q ss_pred ccccceeccceEEEEEEecCC---CCEEEEEeCCCeEEEEEcCCce-eeeeeccCCCcccccccccccccCceeccCCCC
Q 015290 106 YLKSLEIEEKINRVRWCAAPN---GSMFILSTNDKTIKLWKVRDQK-VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPS 181 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~---~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (409)
..|.+++| +|+ +.+|++++.|+.|++||+.+++ .......+ ...+.++.+.. ...++++
T Consensus 66 --------~~v~~~~~--~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~------~~~~s~~ 128 (357)
T 3i2n_A 66 --------KPIKCGTF--GATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGH-KEIINAIDGIG------GLGIGEG 128 (357)
T ss_dssp --------SCEEEEEC--TTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCC-SSCEEEEEEES------GGGCC-C
T ss_pred --------CcEEEEEE--cCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEec-ccceEEEeecc------ccccCCC
Confidence 89999999 677 6999999999999999999876 43333211 12222221110 0134556
Q ss_pred CceeecccccccceeEEEecCCcccceeeeeecccc----ccceeEEE----eCCCCCeEEEe-cCCeEEEEEccCCCce
Q 015290 182 FAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAH----DFNINSIS----NNSDCETFVSA-DDLRINLWNLEISDQC 252 (409)
Q Consensus 182 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~v~~l~----~~~~~~~l~~~-~d~~i~lwd~~~~~~~ 252 (409)
+..++++.. ++.+++||+..... ++..+ ..| ...+.+++ |+|++++++++ .|+.|++||++ .+..
T Consensus 129 ~~~l~~~~~--d~~i~vwd~~~~~~--~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 202 (357)
T 3i2n_A 129 APEIVTGSR--DGTVKVWDPRQKDD--PVANM-EPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR-NMAL 202 (357)
T ss_dssp CCEEEEEET--TSCEEEECTTSCSS--CSEEE-CCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETT-TTEE
T ss_pred ccEEEEEeC--CCeEEEEeCCCCCC--cceec-cccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECc-cCce
Confidence 666776665 89999999987431 23333 333 33788888 78999999999 99999999999 5554
Q ss_pred eeeeecCCCcCcCccCceEEEEEeC---CCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccc
Q 015290 253 FNIVDMKPSNMDDLTEVITSAEFHP---IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIAS 329 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (409)
.. ...|...|.+++|+| ++ .+|++++.||.|++||+++++.. ..+.. ..+.+|...
T Consensus 203 ~~--------~~~~~~~v~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~----~~~~~--------~~~~~~~~~ 261 (357)
T 3i2n_A 203 RW--------ETNIKNGVCSLEFDRKDISM-NKLVATSLEGKFHVFDMRTQHPT----KGFAS--------VSEKAHKST 261 (357)
T ss_dssp EE--------EEECSSCEEEEEESCSSSSC-CEEEEEESTTEEEEEEEEEEETT----TEEEE--------EEEECCSSC
T ss_pred ee--------ecCCCCceEEEEcCCCCCCC-CEEEEECCCCeEEEEeCcCCCcc----cceee--------eccCCCcCC
Confidence 33 345778999999999 88 99999999999999999876531 22211 012356789
Q ss_pred eeeeEeccCCC-EEEEeec-CeEEEEEccCCC------------------cceEEEecccCcccccccccCCCCccceee
Q 015290 330 ISDIKFANDGQ-HLLSRDY-MNLKLWDIRMDS------------------TPVATFKIHEHLRPKLCDLYNNDSIFDKFE 389 (409)
Q Consensus 330 i~~~~~s~~g~-~l~sg~~-~~v~iwd~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 389 (409)
|.+++|+|+++ +|++++. +.|++||++... +.+..+.+|...+ .+
T Consensus 262 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v---------------~~ 326 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI---------------SS 326 (357)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE---------------EE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe---------------eE
Confidence 99999999998 7888874 999999997522 3466677777665 69
Q ss_pred EEEcCCCCeEE-EcccCCCC
Q 015290 390 CSVSGDGLHFA-TGSYRRDN 408 (409)
Q Consensus 390 ~~~spdg~~l~-s~s~dg~i 408 (409)
++|+|+|++|+ +++.||.|
T Consensus 327 ~~~s~~~~~l~~s~~~d~~i 346 (357)
T 3i2n_A 327 LDWSPDKRGLCVCSSFDQTV 346 (357)
T ss_dssp EEECSSSTTEEEEEETTSEE
T ss_pred EEEcCCCCeEEEEecCCCcE
Confidence 99999999998 89999875
No 47
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-34 Score=256.84 Aligned_cols=292 Identities=11% Similarity=0.068 Sum_probs=216.1
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|.+.|++++|+|++++||+|+.||.|+||++.++.. ......+.+|.
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~------------------------~~~~~~~~~~~-------- 56 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK------------------------NVDLLQSLRYK-------- 56 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT------------------------EEEEEEEEECS--------
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc------------------------cccceeeeecC--------
Confidence 4899999999999999999999999999999987651 11234455777
Q ss_pred ceeccceEEEEEEecCCCC-EEEEEeCCCeEEEEEc-CCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 110 LEIEEKINRVRWCAAPNGS-MFILSTNDKTIKLWKV-RDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~-~l~s~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| +|+++ +|++++.|+.|++||+ .+++............+. .+.+++ ...+++
T Consensus 57 ----~~v~~~~~--~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~------------~l~~~~-~~~l~s 117 (342)
T 1yfq_A 57 ----HPLLCCNF--IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC------------RICKYG-DDKLIA 117 (342)
T ss_dssp ----SCEEEEEE--EESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEE------------EEEEET-TTEEEE
T ss_pred ----CceEEEEE--CCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceE------------EEEeCC-CCEEEE
Confidence 89999999 67899 9999999999999999 877653332100222222 333333 445555
Q ss_pred ccccccceeEEEecCCccc------ceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccC-CCceeeeeecC
Q 015290 188 LEWTENMATKIANVGNSVH------ARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEI-SDQCFNIVDMK 259 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~-~~~~~~~~~~~ 259 (409)
++. ++.|++||+..... .+++..+ .|...|.+++|+|++ ++++ .|+.|++||++. ........
T Consensus 118 ~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~--- 188 (342)
T 1yfq_A 118 ASW--DGLIEVIDPRNYGDGVIAVKNLNSNNT--KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIE--- 188 (342)
T ss_dssp EET--TSEEEEECHHHHTTBCEEEEESCSSSS--SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEE---
T ss_pred EcC--CCeEEEEcccccccccccccCCeeeEE--eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceee---
Confidence 544 89999999864111 3344443 388899999999987 7777 999999999984 22222221
Q ss_pred CCcCcCccCceEEEEEeC-CCCCEEEEEeCCCeEEEEeCCCc--cccccccccccccccccCCcccccccccceeeeEec
Q 015290 260 PSNMDDLTEVITSAEFHP-IYCNLLAYSSSRGFVRLVDMRQS--ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA 336 (409)
Q Consensus 260 ~~~~~~~~~~v~~~~~~p-~~~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 336 (409)
...|...+.+++|+| ++ ++|++++.||.|++||++.. .........+..|.... .-.+|...|.+++|+
T Consensus 189 ---~~~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~s 260 (342)
T 1yfq_A 189 ---ESGLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL----KDTNLAYPVNSIEFS 260 (342)
T ss_dssp ---ECSCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT----TCCSSCCCEEEEEEC
T ss_pred ---ecCCCCceeEEEECCCCC-CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc----cccccceeEEEEEEc
Confidence 356778999999999 98 99999999999999999875 11011123344421110 011345589999999
Q ss_pred cCCCEEEEeec-CeEEEEEccCCCcceEEEecc-cCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 337 NDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIH-EHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 337 ~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
|++++|++++. +.|++||+.+ ++.+..+.+| ...+ .+++ |++++|++++.||+
T Consensus 261 ~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~h~~~v---------------~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 261 PRHKFLYTAGSDGIISCWNLQT-RKKIKNFAKFNEDSV---------------VKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp TTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSSEE---------------EEEE--ECSSEEEEEEECTH
T ss_pred CCCCEEEEecCCceEEEEcCcc-HhHhhhhhcccCCCc---------------eEec--CCCCeEEEEecCCc
Confidence 99999999975 9999999986 8888888887 7765 5777 99999999999986
No 48
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.6e-34 Score=249.68 Aligned_cols=254 Identities=20% Similarity=0.303 Sum_probs=190.5
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|...|.+++|+|++++|++|+.|++|+|||+.+++ .+..+.+|.
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~---------------------------~~~~~~~h~------- 107 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE---------------------------TYQRFVGHK------- 107 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---------------------------EEEEEECCS-------
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC---------------------------eeEEEccCC-------
Confidence 3599999999999999999999999999999998776 467789999
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+++| ++++.+|++++.|++|++||+.......... ....+.++.+.+... .......++++
T Consensus 108 -----~~v~~~~~--~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~--h~~~v~~~~~~~~~~------~~~~~~~l~s~ 172 (319)
T 3frx_A 108 -----SDVMSVDI--DKKASMIISGSRDKTIKVWTIKGQCLATLLG--HNDWVSQVRVVPNEK------ADDDSVTIISA 172 (319)
T ss_dssp -----SCEEEEEE--CTTSCEEEEEETTSCEEEEETTSCEEEEECC--CSSCEEEEEECCC------------CCEEEEE
T ss_pred -----CcEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCeEEEEec--cCCcEEEEEEccCCC------CCCCccEEEEE
Confidence 89999999 7999999999999999999997654333221 111222222211100 01123345555
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
+. |+.|++||+.. .++...+ .+|...|.+++|+|++++|++| .|+.|++||+. .++.+..+ . +.
T Consensus 173 ~~--d~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~-~~~~~~~~-------~-~~ 237 (319)
T 3frx_A 173 GN--DKMVKAWNLNQ---FQIEADF-IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA-AKKAMYTL-------S-AQ 237 (319)
T ss_dssp ET--TSCEEEEETTT---TEEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT-TTEEEEEE-------E-CC
T ss_pred eC--CCEEEEEECCc---chhheee-cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCcEEEEe-------c-CC
Confidence 54 89999999976 3445555 7899999999999999999999 99999999999 66666553 3 34
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec
Q 015290 268 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
..|.+++|+|++ .+|++++.+ .+++|++..+... ..+.. ........|...+.+++|+|||++|++|+.
T Consensus 238 ~~v~~~~~sp~~-~~la~~~~~-~i~v~~~~~~~~~----~~~~~-----~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 238 DEVFSLAFSPNR-YWLAAATAT-GIKVFSLDPQYLV----DDLRP-----EFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp SCEEEEEECSSS-SEEEEEETT-EEEEEEETTEEEE----EEECC-----CCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEEcCCC-CEEEEEcCC-CcEEEEeCcCeee----eccCc-----cccccccCcCcceeEEEECCCCCEEEEeec
Confidence 679999999999 888887755 5999999875431 11111 111112345668999999999999999974
Q ss_pred -CeEEEEEccC
Q 015290 348 -MNLKLWDIRM 357 (409)
Q Consensus 348 -~~v~iwd~~~ 357 (409)
+.|+|||+.+
T Consensus 307 Dg~i~vWd~~t 317 (319)
T 3frx_A 307 DNVIRVWQVMT 317 (319)
T ss_dssp TSCEEEEEEEE
T ss_pred CceEEEEEEee
Confidence 9999999875
No 49
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.1e-34 Score=254.35 Aligned_cols=261 Identities=12% Similarity=0.129 Sum_probs=200.9
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|++++||+|+.||.|++||+.++.. ..+....+.+|.
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-----------------------~~~~~~~~~~~~------- 57 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS-----------------------NWELSDSWRAHD------- 57 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSC-----------------------CEEEEEEEECCS-------
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCC-----------------------cceecceeccCC-------
Confidence 35999999999999999999999999999999987653 334667788998
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+++|.|..++++|++++.|++|++||+.++......
T Consensus 58 -----~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~----------------------------------- 97 (351)
T 3f3f_A 58 -----SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSG----------------------------------- 97 (351)
T ss_dssp -----SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSS-----------------------------------
T ss_pred -----CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccc-----------------------------------
Confidence 8999999942116899999999999999999876431100
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC--CCeEEEe-cCCeEEEEEccCCCceeeeeec------C
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQCFNIVDM------K 259 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~------~ 259 (409)
...+++..+ ..|...|.+++|+|+ +++++++ .|+.|++||++ ....+..+.. .
T Consensus 98 ----------------~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 98 ----------------RRWNKLCTL-NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDAL-EPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp ----------------CSEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECS-STTCTTCCEEEEEEESC
T ss_pred ----------------cCcceeeee-cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCC-ChHHhcccccccccccc
Confidence 001222233 678999999999999 9999999 99999999998 4443322111 1
Q ss_pred CCcCcCccCceEEEEEeCC---CCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEec
Q 015290 260 PSNMDDLTEVITSAEFHPI---YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA 336 (409)
Q Consensus 260 ~~~~~~~~~~v~~~~~~p~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 336 (409)
......|...+.+++|+|+ + .+|++++.++.+.+|+...++. .... .+.+|...|.+++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~-~~l~~~~~~~~~~~~~~~~~~~-----~~~~----------~~~~h~~~i~~~~~~ 223 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSP-EKLAVSALEQAIIYQRGKDGKL-----HVAA----------KLPGHKSLIRSISWA 223 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSC-CEEEEEETTEEEEEEECTTSCE-----EEEE----------ECCCCCSCEEEEEEC
T ss_pred ccccCCcccceeEEEeccCCCCC-cEEEEecCCCcEEEEccCCCce-----eeee----------ecCCCCcceeEEEEC
Confidence 1112367889999999997 6 8999999999998888776542 1111 134567899999999
Q ss_pred cCC----CEEEEeec-CeEEEEEccCCC---------------------------------------------cceEEEe
Q 015290 337 NDG----QHLLSRDY-MNLKLWDIRMDS---------------------------------------------TPVATFK 366 (409)
Q Consensus 337 ~~g----~~l~sg~~-~~v~iwd~~~~~---------------------------------------------~~~~~~~ 366 (409)
|++ ++|++|+. +.|++||++... +.+..+.
T Consensus 224 p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (351)
T 3f3f_A 224 PSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD 303 (351)
T ss_dssp CCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEEC
T ss_pred CCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe
Confidence 998 89999874 999999997521 4455556
Q ss_pred cccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 367 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+|...+ ++++|+|++++|++|+.||.|
T Consensus 304 ~h~~~v---------------~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 304 DHNGEV---------------WSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp TTSSCE---------------EEEEECSSSCCEEEEETTSCE
T ss_pred cccccE---------------EEEEEcCCCCEEEEecCCCcE
Confidence 666554 799999999999999999976
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=260.79 Aligned_cols=249 Identities=16% Similarity=0.216 Sum_probs=195.0
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|++++||+|+.||.|+||++.... .+.+..+.+|.
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-------------------------~~~~~~~~~h~------- 55 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHE------- 55 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-------------------------EEEEEEECCCS-------
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-------------------------ceeeeEecCCC-------
Confidence 4599999999999999999999999999999997432 23567788998
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
+.|++++|.|..++.+|++++.|+.|++||+.+++....
T Consensus 56 -----~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~------------------------------------ 94 (379)
T 3jrp_A 56 -----GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI------------------------------------ 94 (379)
T ss_dssp -----SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEE------------------------------------
T ss_pred -----CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEe------------------------------------
Confidence 899999994222389999999999999999988753222
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC--CCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
..+ ..|...|.+++|+|+ +++|+++ .|+.|++||++........ .+..
T Consensus 95 ----------------------~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~------~~~~ 145 (379)
T 3jrp_A 95 ----------------------AVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI------IIDA 145 (379)
T ss_dssp ----------------------EEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE------EEEC
T ss_pred ----------------------eee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE------EecC
Confidence 111 568889999999999 9999999 9999999999833222221 1567
Q ss_pred ccCceEEEEEeC-------------CCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceee
Q 015290 266 LTEVITSAEFHP-------------IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 332 (409)
Q Consensus 266 ~~~~v~~~~~~p-------------~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 332 (409)
|...|.+++|+| ++ .+|++++.||.|++||++++........ .+.+|...|.+
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~h~~~v~~ 211 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLES-------------TLEGHSDWVRD 211 (379)
T ss_dssp CTTCEEEEEECCCC----------CTT-CEEEEEETTSCEEEEEEETTTTEEEEEE-------------EECCCSSCEEE
T ss_pred CCCceEEEEEcCccccccccccCCCCC-CEEEEEeCCCeEEEEEecCCCcceeeEE-------------EEecccCcEeE
Confidence 889999999999 57 9999999999999999987542111111 23456789999
Q ss_pred eEeccC---CCEEEEee-cCeEEEEEccCCCcce-EEE-ec--ccCcccccccccCCCCccceeeEEEcCCCCeEEEccc
Q 015290 333 IKFAND---GQHLLSRD-YMNLKLWDIRMDSTPV-ATF-KI--HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY 404 (409)
Q Consensus 333 ~~~s~~---g~~l~sg~-~~~v~iwd~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~ 404 (409)
++|+|+ +++|++++ |+.|++||++...... ..+ .. |... |++++|+|+|++|++++.
T Consensus 212 ~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 212 VAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV---------------LWRASWSLSGNVLALSGG 276 (379)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC---------------EEEEEECSSSCCEEEEES
T ss_pred EEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCc---------------EEEEEEcCCCCEEEEecC
Confidence 999999 89999997 5999999998622221 111 11 3333 269999999999999999
Q ss_pred CCCC
Q 015290 405 RRDN 408 (409)
Q Consensus 405 dg~i 408 (409)
||.|
T Consensus 277 dg~i 280 (379)
T 3jrp_A 277 DNKV 280 (379)
T ss_dssp SSSE
T ss_pred CCcE
Confidence 9975
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-33 Score=256.88 Aligned_cols=276 Identities=17% Similarity=0.217 Sum_probs=212.0
Q ss_pred cEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceec
Q 015290 34 IVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIE 113 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 113 (409)
.++.|+||++ ++||+|. |++|+|||..+++.. .+..+.+|.
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~-------------------------~~~~~~~~~------------ 147 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDIL-------------------------QLLQMEQPG------------ 147 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEE-------------------------EEEECCSTT------------
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEE-------------------------EEEEecCCC------------
Confidence 4677999976 5888875 899999999988631 122345666
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 193 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (409)
..|++|+| +|+|++|++|+.|++|++||+.+++.......+... +.++. .+..+++++.. +
T Consensus 148 ~~V~sv~f--spdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~-v~~~s--------------~~~~~l~sgs~--d 208 (420)
T 4gga_A 148 EYISSVAW--IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR-VGSLS--------------WNSYILSSGSR--S 208 (420)
T ss_dssp CCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEE--------------EETTEEEEEET--T
T ss_pred CcEEEEEE--CCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCc-eEEEe--------------eCCCEEEEEeC--C
Confidence 78999999 799999999999999999999998877665433211 11111 12244555544 8
Q ss_pred ceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEE
Q 015290 194 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS 272 (409)
Q Consensus 194 ~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 272 (409)
+.+++|+..... ..+..+ .+|...+..+.++|++++++++ .|+.+++|+.......... ......|...|.+
T Consensus 209 ~~i~~~d~~~~~--~~~~~~-~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~----~~~~~~~~~~V~~ 281 (420)
T 4gga_A 209 GHIHHHDVRVAE--HHVATL-SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP----LQTFTQHQGAVKA 281 (420)
T ss_dssp SEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCC----SEEECCCSSCEEE
T ss_pred CceeEeeecccc--eeeEEe-cccccceeeeeecCCCCeeeeeeccccceEEeecccccccee----eeeecccCCceee
Confidence 899999987633 233344 7899999999999999999999 9999999999832221111 0114678899999
Q ss_pred EEEeCCCCCEEEEE--eCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee---c
Q 015290 273 AEFHPIYCNLLAYS--SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD---Y 347 (409)
Q Consensus 273 ~~~~p~~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~---~ 347 (409)
++|+|.+..+++++ +.|++|++||+++++.. ..+.. ...+.++.|+|+++.+++++ |
T Consensus 282 ~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~----~~~~~--------------~~~v~~~~~~~~~~~lv~~sg~~d 343 (420)
T 4gga_A 282 VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL----SAVDA--------------HSQVCSILWSPHYKELISGHGFAQ 343 (420)
T ss_dssp EEECTTCTTEEEEEECTTTCEEEEEETTTTEEE----EEEEC--------------SSCEEEEEEETTTTEEEEEECTTT
T ss_pred eeeCCCcccEEEEEeecCCCEEEEEeCCccccc----eeecc--------------ccceeeeeecCCCCeEEEEEecCC
Confidence 99999886777664 57999999999987642 33333 35789999999999888753 4
Q ss_pred CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 348 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 348 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+.|+|||+.+ ++++..+.+|...+ ++++|+|||++|+||+.||+|
T Consensus 344 ~~I~iwd~~~-~~~v~~l~gH~~~V---------------~~l~~spdg~~l~S~s~D~tv 388 (420)
T 4gga_A 344 NQLVIWKYPT-MAKVAELKGHTSRV---------------LSLTMSPDGATVASAAADETL 388 (420)
T ss_dssp CCEEEEETTT-CCEEEEECCCSSCE---------------EEEEECTTSSCEEEEETTTEE
T ss_pred CEEEEEECCC-CcEEEEEcCCCCCE---------------EEEEEcCCCCEEEEEecCCeE
Confidence 9999999986 89999999999876 699999999999999999986
No 52
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.4e-33 Score=248.24 Aligned_cols=265 Identities=14% Similarity=0.195 Sum_probs=190.9
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|...|++++|+|++.+|++|+.|++|++||+.+++ .+..+.+|.
T Consensus 73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~---------------------------~~~~~~~h~------- 118 (343)
T 2xzm_R 73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT---------------------------TYKRFVGHQ------- 118 (343)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC---------------------------EEEEEECCC-------
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---------------------------EEEEEcCCC-------
Confidence 4599999999999999999999999999999998776 467788999
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeecc-CCCcccccccccccccCceeccCCCCCceeec
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEM-DHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| +|++++|++++.|++|++||+........... .....+.++.+.+...... ...+...++++
T Consensus 119 -----~~v~~v~~--sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~l~s 189 (343)
T 2xzm_R 119 -----SEVYSVAF--SPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSAN--KVQPFAPYFAS 189 (343)
T ss_dssp -----SCEEEEEE--CSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCS--CCCSSCCEEEE
T ss_pred -----CcEEEEEE--CCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccccccc--ccCCCCCEEEE
Confidence 89999999 79999999999999999999975433222111 1222233333332211110 11122345666
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
++. |+.|++||.. .+....+ .+|...|.+++|+|++++|++| .|+.|++||+......... ..+
T Consensus 190 ~~~--d~~i~iwd~~----~~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~--------~~~ 254 (343)
T 2xzm_R 190 VGW--DGRLKVWNTN----FQIRYTF-KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQRE--------FDA 254 (343)
T ss_dssp EET--TSEEEEEETT----TEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEE--------EEC
T ss_pred EcC--CCEEEEEcCC----CceeEEE-cCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccccee--------ecC
Confidence 655 8999999953 2444444 7899999999999999999999 9999999999534433333 124
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
...|.+++|+|++ .+++++ .|+.|++||+.+++... ...+.. ..........+|...+.+++|+|+|++|++|+
T Consensus 255 ~~~v~~v~~sp~~-~~la~~-~d~~v~iw~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 255 GSTINQIAFNPKL-QWVAVG-TDQGVKIFNLMTQSKAP--VCTIEA--EPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp SSCEEEEEECSSS-CEEEEE-ESSCEEEEESSSCCSCS--EEECCC--CSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CCcEEEEEECCCC-CEEEEE-CCCCEEEEEeCCCCCCc--eEEeec--CcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 4569999999998 777654 57789999998764311 001111 00000111236778899999999999999997
Q ss_pred -cCeEEEEEccC
Q 015290 347 -YMNLKLWDIRM 357 (409)
Q Consensus 347 -~~~v~iwd~~~ 357 (409)
|+.|++|++.+
T Consensus 329 ~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 329 TDGVIRTFSFET 340 (343)
T ss_dssp TTSEEEEEEEEE
T ss_pred CCceEEEEEEEc
Confidence 49999999864
No 53
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.1e-33 Score=250.75 Aligned_cols=292 Identities=17% Similarity=0.211 Sum_probs=213.8
Q ss_pred cCCCcEEEEEECCC---CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 30 QDVDIVSAIEFDKT---GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 30 ~h~~~v~~v~~~~~---~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
.|.+.|++++|+|+ |++||+|+.||.|+|||+.+... .....+.+|.
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-------------------------~~~~~~~~h~----- 86 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-------------------------TIPKAQQMHT----- 86 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-------------------------EEEEEEEECS-----
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-------------------------eeEEEecccc-----
Confidence 48999999999998 69999999999999999987332 1336778888
Q ss_pred cccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccC--CCCCce
Q 015290 107 LKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHN--PPSFAH 184 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 184 (409)
+.|.+++| +|++++|++++.|+.|++||+.+++...... . ...+..+.+ ++++.+
T Consensus 87 -------~~v~~~~~--~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~------------~~~v~~~~~~~~~~~~~ 143 (368)
T 3mmy_A 87 -------GPVLDVCW--SDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ--H------------DAPVKTIHWIKAPNYSC 143 (368)
T ss_dssp -------SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEE--C------------SSCEEEEEEEECSSCEE
T ss_pred -------CCEEEEEE--CcCCCEEEEEcCCCcEEEEEcCCCCceeecc--c------------cCceEEEEEEeCCCCCE
Confidence 89999999 7899999999999999999999887665432 1 122333333 555666
Q ss_pred eecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcC
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM 263 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 263 (409)
++++.. |+.|++||+.+. +++..+ ..+ ..+.++.+.+ ..++++ .++.+.+|+++........+ .
T Consensus 144 l~~~~~--dg~i~vwd~~~~---~~~~~~-~~~-~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~------~ 208 (368)
T 3mmy_A 144 VMTGSW--DKTLKFWDTRSS---NPMMVL-QLP-ERCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRI------E 208 (368)
T ss_dssp EEEEET--TSEEEEECSSCS---SCSEEE-ECS-SCEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEEC------C
T ss_pred EEEccC--CCcEEEEECCCC---cEEEEE-ecC-CCceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhc------c
Confidence 666655 899999999874 344444 333 3566666654 467777 99999999998444433332 2
Q ss_pred cCccCceEEEEEeCCCCCE----EEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCC
Q 015290 264 DDLTEVITSAEFHPIYCNL----LAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG 339 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~----l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 339 (409)
..+...+.++.+.++. .. +++++.||.|++||++.... ......+..|.. ........+|...|.+++|+|++
T Consensus 209 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~ 285 (368)
T 3mmy_A 209 SPLKHQHRCVAIFKDK-QNKPTGFALGSIEGRVAIHYINPPNP-AKDNFTFKCHRS-NGTNTSAPQDIYAVNGIAFHPVH 285 (368)
T ss_dssp CSCSSCEEEEEEEECT-TSCEEEEEEEETTSEEEEEESSCSCH-HHHSEEEECSEE-C----CCCEEECCEEEEEECTTT
T ss_pred ccccCCCceEEEcccC-CCCCCeEEEecCCCcEEEEecCCCCc-cccceeeeeeec-ccccccccccccceEEEEEecCC
Confidence 2334455666666654 43 99999999999999987632 011233344221 11112233445589999999999
Q ss_pred CEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 340 QHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 340 ~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
++|++|+ |+.|++||+.+ ++++..+.+|...+ .+++|+|||++|++++.|+..
T Consensus 286 ~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v---------------~~~~~s~~g~~l~~~s~d~~~ 339 (368)
T 3mmy_A 286 GTLATVGSDGRFSFWDKDA-RTKLKTSEQLDQPI---------------SACCFNHNGNIFAYASSYDWS 339 (368)
T ss_dssp CCEEEEETTSCEEEEETTT-TEEEEECCCCSSCE---------------EEEEECTTSSCEEEEECCCST
T ss_pred CEEEEEccCCeEEEEECCC-CcEEEEecCCCCCc---------------eEEEECCCCCeEEEEeccccc
Confidence 9999997 59999999986 88899998888775 699999999999999998753
No 54
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-33 Score=253.59 Aligned_cols=250 Identities=15% Similarity=0.206 Sum_probs=190.5
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...|++++|+|+|++||+|+.||.|+|||+.+++ .+..+.+|.
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~---------------------------~~~~~~~h~---------- 165 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK---------------------------IVMILQGHE---------- 165 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------------------------EEEEECCCS----------
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------------------------EEEEEccCC----------
Confidence 3459999999999999999999999999998765 467789999
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCC-CCceeecccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP-SFAHGYHLEW 190 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 190 (409)
..|.+++| +|++++|++++.|++|++||+.+++........ ..+..+.+++ ++.+++.++.
T Consensus 166 --~~v~~~~~--~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 166 --QDIYSLDY--FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE--------------DGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp --SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--------------SCEEEEEECSTTCCEEEEEET
T ss_pred --CCEEEEEE--cCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC--------------CCcEEEEEECCCCCEEEEEcC
Confidence 89999999 799999999999999999999988765543321 1223333344 5566666665
Q ss_pred cccceeEEEecCCcccceeeee---eccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeec-----CCC
Q 015290 191 TENMATKIANVGNSVHARCQKV---YPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDM-----KPS 261 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~-----~~~ 261 (409)
|+.|++||+.+......+.. ...+|...|.+++|+|++++|++| .|+.|++||++.... ...... ...
T Consensus 228 --d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~-~~~~~~~~~~~~~~ 304 (393)
T 1erj_A 228 --DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN-KSDSKTPNSGTCEV 304 (393)
T ss_dssp --TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------------CEEE
T ss_pred --CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCC-cccccCCCCCcceE
Confidence 89999999976432222110 114789999999999999999999 999999999973211 100000 001
Q ss_pred cCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEecc----
Q 015290 262 NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN---- 337 (409)
Q Consensus 262 ~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---- 337 (409)
.+.+|...|.+++|+|++ .+|++|+.|+.|++||+++++. ...+ .+|...|.+++|++
T Consensus 305 ~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~~~~----~~~l-------------~~h~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 305 TYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKSGNP----LLML-------------QGHRNSVISVAVANGSSL 366 (393)
T ss_dssp EEECCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTTCCE----EEEE-------------ECCSSCEEEEEECSSCTT
T ss_pred EEecccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCCCeE----EEEE-------------CCCCCCEEEEEecCCcCc
Confidence 256799999999999999 9999999999999999988753 2233 44578899999876
Q ss_pred --CCCEEEEee-cCeEEEEEccC
Q 015290 338 --DGQHLLSRD-YMNLKLWDIRM 357 (409)
Q Consensus 338 --~g~~l~sg~-~~~v~iwd~~~ 357 (409)
++++|++|+ |+.|+||++..
T Consensus 367 ~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 367 GPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCCCEEEEECCCCcEEECcccc
Confidence 688999997 59999999864
No 55
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=257.71 Aligned_cols=287 Identities=15% Similarity=0.197 Sum_probs=213.0
Q ss_pred ccccCCCcEEEEEECCCCC-EEEEEecCCeEEEEec----cCCcCCCCccchhhhhhhcccccccCCCceeeeeeecC--
Q 015290 27 EELQDVDIVSAIEFDKTGD-YLAVGDRGGRVILFET----VGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQS-- 99 (409)
Q Consensus 27 ~~~~h~~~v~~v~~~~~~~-~la~~~~dg~i~iw~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 99 (409)
....|.+.|++++|+|+++ +||+|+.||.|++|++ .+++.. +...+.......+.+
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~ 102 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-----------------WKLTIIAELRHPFALSA 102 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-----------------EEEEEEEEEECCCCCC-
T ss_pred eeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-----------------ccccccccccccccccc
Confidence 3445779999999999999 9999999999999999 665410 000000111111222
Q ss_pred ----CCccccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCcee
Q 015290 100 ----HEPEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMN 175 (409)
Q Consensus 100 ----h~~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (409)
|. +.|.+++| +|++++|++++.|+.|++||. +++....... ....+..
T Consensus 103 ~~~~~~------------~~v~~~~~--s~~~~~l~~~~~dg~i~i~~~-~~~~~~~~~~-------------~~~~v~~ 154 (425)
T 1r5m_A 103 SSGKTT------------NQVTCLAW--SHDGNSIVTGVENGELRLWNK-TGALLNVLNF-------------HRAPIVS 154 (425)
T ss_dssp -----C------------BCEEEEEE--CTTSSEEEEEETTSCEEEEET-TSCEEEEECC-------------CCSCEEE
T ss_pred cccCCC------------CceEEEEE--cCCCCEEEEEeCCCeEEEEeC-CCCeeeeccC-------------CCccEEE
Confidence 44 79999999 789999999999999999994 4443333221 1233444
Q ss_pred ccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccc---------------eeEEEeCCCCCeEEEe-cCC
Q 015290 176 EHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFN---------------INSISNNSDCETFVSA-DDL 239 (409)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------------v~~l~~~~~~~~l~~~-~d~ 239 (409)
+.+++++..++.+.. ++.+++||+.+. +.+..+ ..+... +.+++|+|++ .++++ .++
T Consensus 155 ~~~~~~~~~l~~~~~--d~~i~iwd~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g 227 (425)
T 1r5m_A 155 VKWNKDGTHIISMDV--ENVTILWNVISG---TVMQHF-ELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKG 227 (425)
T ss_dssp EEECTTSSEEEEEET--TCCEEEEETTTT---EEEEEE-CCC---------------CCCBSCCEEEETT-EEEEECGGG
T ss_pred EEECCCCCEEEEEec--CCeEEEEECCCC---cEEEEe-eccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCC
Confidence 555666666666654 899999999763 444444 445544 8999999886 46677 999
Q ss_pred eEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCC
Q 015290 240 RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGS 319 (409)
Q Consensus 240 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 319 (409)
.|++||++ .+..+.. +..|...|.+++|+|++ ++|++++.|+.|++||+++++. ...+
T Consensus 228 ~i~~~d~~-~~~~~~~-------~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~----~~~~--------- 285 (425)
T 1r5m_A 228 AIFVYQIT-EKTPTGK-------LIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNS----QNCF--------- 285 (425)
T ss_dssp CEEEEETT-CSSCSEE-------ECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSC----SEEE---------
T ss_pred eEEEEEcC-CCceeee-------eccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCcc----ceEe---------
Confidence 99999999 5555554 56788999999999999 9999999999999999988653 1222
Q ss_pred cccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCe
Q 015290 320 KSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLH 398 (409)
Q Consensus 320 ~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 398 (409)
.+|...+.+++|+|++ ++++++ ++.|++||+++ ++.+..+..|...+ .+++|+|++++
T Consensus 286 ----~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i---------------~~~~~s~~~~~ 344 (425)
T 1r5m_A 286 ----YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPI---------------FAGRISQDGQK 344 (425)
T ss_dssp ----CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-TEEEEEEECTTCCE---------------EEEEECTTSSE
T ss_pred ----cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-CcEeEecccCCccE---------------EEEEEcCCCCE
Confidence 2346789999999999 888886 59999999986 88888888887765 69999999999
Q ss_pred EEEcccCCCC
Q 015290 399 FATGSYRRDN 408 (409)
Q Consensus 399 l~s~s~dg~i 408 (409)
|++++.||.|
T Consensus 345 l~~~~~dg~i 354 (425)
T 1r5m_A 345 YAVAFMDGQV 354 (425)
T ss_dssp EEEEETTSCE
T ss_pred EEEEECCCeE
Confidence 9999999976
No 56
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-34 Score=258.42 Aligned_cols=266 Identities=18% Similarity=0.238 Sum_probs=198.9
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|...|.+++|+|+|++||+|+.|+.|++|++.+.... .........+.+|.
T Consensus 106 ~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~--------------------~~~~~~~~~~~gh~-------- 157 (380)
T 3iz6_a 106 LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR--------------------DGNMPVSRVLTGHK-------- 157 (380)
T ss_dssp CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC--------------------CCSSTTCCBCCCCS--------
T ss_pred cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc--------------------cCCccceeeccCCC--------
Confidence 37889999999999999999999999999998764320 00112345678888
Q ss_pred ceeccceEEEEEEecCC-CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCC-CCceeec
Q 015290 110 LEIEEKINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP-SFAHGYH 187 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 187 (409)
+.|.++.|. |+ +..|++++.|++|++||+.+++........... .....+....+++ +..++++
T Consensus 158 ----~~v~~~~~~--~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 158 ----GYASSCQYV--PDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPS--------GHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp ----SCCCCCBCC--SSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSS--------SCCSCEEEEEECSSSCCEEEE
T ss_pred ----cceEEEEEe--cCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCC--------CCccCeEEEEeecCCCCEEEE
Confidence 899999994 54 567999999999999999988776554221110 0111222333322 4456666
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
++. |+.|++||+... ..++..+ .+|...|.+++|+|++++|++| .|++|++||++ .+..+..+.........+
T Consensus 224 gs~--D~~v~~wd~~~~--~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~-~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 224 GSC--DTTVRLWDLRIT--SRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR-TGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp EET--TSCEEEEETTTT--CCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT-TTEEEEEECCCCSSSCCS
T ss_pred EEC--CCeEEEEECCCC--CcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC-CCcEEEEecccccccccc
Confidence 665 999999999742 2445555 7899999999999999999999 99999999999 676666654332222334
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
...|++++|+|+| .+|++|+.||.|++||+..++.. ..+.. ...+|...|.+++|+|+|++|++|+
T Consensus 298 ~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~~----~~~~~---------~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 298 LPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEMV----LNLGT---------LQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp SCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCEE----EEECC---------SCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred cCceEEEEECCCC-CEEEEEECCCCEEEEECCCCceE----EEEec---------ccCCCCCceEEEEECCCCCEEEEee
Confidence 4568999999999 99999999999999999876532 11111 1235678999999999999999998
Q ss_pred -cCeEEEEEccC
Q 015290 347 -YMNLKLWDIRM 357 (409)
Q Consensus 347 -~~~v~iwd~~~ 357 (409)
|+.|++|++..
T Consensus 364 ~D~~i~iW~~~~ 375 (380)
T 3iz6_a 364 WDKNLKIWAFSG 375 (380)
T ss_dssp TTSCEEEEECCS
T ss_pred CCCCEEEEecCC
Confidence 59999999974
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-33 Score=255.28 Aligned_cols=270 Identities=13% Similarity=0.158 Sum_probs=207.7
Q ss_pred cEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecC-CCcccccccccee
Q 015290 34 IVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQS-HEPEFDYLKSLEI 112 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~ 112 (409)
.+.+++|++ ..+++++.||.|++|++.+++. ...+.. |.
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~---------------------------~~~~~~~~~----------- 134 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADSGSV---------------------------SALAETDES----------- 134 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTTCCE---------------------------EEEEECCTT-----------
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCCCcE---------------------------eEeeecCCC-----------
Confidence 355577775 4577888999999999988763 233333 66
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
..|.+++| +|++++|++++.||.|++||+.+++.......+ ...+.++.+ +...++.++.
T Consensus 135 -~~v~~v~~--s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~--------------~~~~l~~~~~-- 194 (401)
T 4aez_A 135 -TYVASVKW--SHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGH-QARVGCLSW--------------NRHVLSSGSR-- 194 (401)
T ss_dssp -CCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEE--------------ETTEEEEEET--
T ss_pred -CCEEEEEE--CCCCCEEEEECCCCeEEEEECcCCeEEEEecCC-CCceEEEEE--------------CCCEEEEEcC--
Confidence 79999999 789999999999999999999988766554422 222222222 1234555544
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceE
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 271 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 271 (409)
++.|++||+.... .....+ .+|...|.+++|+|++++|++| .|+.|++||++ .+..... +..|...|.
T Consensus 195 dg~i~i~d~~~~~--~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~-------~~~~~~~v~ 263 (401)
T 4aez_A 195 SGAIHHHDVRIAN--HQIGTL-QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR-SSIPKFT-------KTNHNAAVK 263 (401)
T ss_dssp TSEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-CSSEEEE-------ECCCSSCCC
T ss_pred CCCEEEEecccCc--ceeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC-CCCccEE-------ecCCcceEE
Confidence 8999999997432 334444 7899999999999999999999 99999999999 5555554 567889999
Q ss_pred EEEEeCCCCCEEEEEe--CCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEE--ee-
Q 015290 272 SAEFHPIYCNLLAYSS--SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS--RD- 346 (409)
Q Consensus 272 ~~~~~p~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s--g~- 346 (409)
+++|+|++..++++++ .|+.|++||+++++. ...+.. ...+.+++|+|++++|++ |+
T Consensus 264 ~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~----~~~~~~--------------~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 264 AVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR----VNTVDA--------------GSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp EEEECTTSTTEEEEECCTTTCEEEEEETTTCCE----EEEEEC--------------SSCEEEEEECSSSSEEEEEECTT
T ss_pred EEEECCCCCCEEEEecCCCCCEEEEEECCCCCE----EEEEeC--------------CCcEEEEEECCCCCeEEEEeecC
Confidence 9999998867888865 799999999998754 233332 457999999999999998 43
Q ss_pred cCeEEEEEccCCCcceE--EEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 347 YMNLKLWDIRMDSTPVA--TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 347 ~~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
++.|++||+.. ++... .+.+|...+ .+++|+|+|++|++++.||.|
T Consensus 326 dg~i~v~~~~~-~~~~~~~~~~~h~~~v---------------~~~~~s~dg~~l~s~~~dg~i 373 (401)
T 4aez_A 326 DNNLSIWSYSS-SGLTKQVDIPAHDTRV---------------LYSALSPDGRILSTAASDENL 373 (401)
T ss_dssp TCEEEEEEEET-TEEEEEEEEECCSSCC---------------CEEEECTTSSEEEEECTTSEE
T ss_pred CCcEEEEecCC-ccceeEEEecCCCCCE---------------EEEEECCCCCEEEEEeCCCcE
Confidence 49999999985 44443 356777765 699999999999999999976
No 58
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.5e-33 Score=245.41 Aligned_cols=274 Identities=16% Similarity=0.207 Sum_probs=207.0
Q ss_pred cEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeee--ecCCCccccccccce
Q 015290 34 IVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTE--FQSHEPEFDYLKSLE 111 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~~~~~~~~~ 111 (409)
.+++|+||+++ +||+| .|++|+|||+.+++. +.. +.+|.
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~---------------------------~~~~~~~~~~---------- 67 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDI---------------------------LQLLQMEQPG---------- 67 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCE---------------------------EEEEECCSTT----------
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCE---------------------------EEEEEecCCC----------
Confidence 45789999986 78876 489999999998763 333 44566
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
..|++++| +|++++|++|+.|++|++||+.+++.......+... +.+ .......++.+..
T Consensus 68 --~~V~~v~~--~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~-~~~--------------~~~~~~~l~s~~~- 127 (318)
T 4ggc_A 68 --EYISSVAW--IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR-VGS--------------LSWNSYILSSGSR- 127 (318)
T ss_dssp --CCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEE--------------EEEETTEEEEEET-
T ss_pred --CeEEEEEE--CCCCCEEEEEECCCcEEEeecCCceeEEEecCccce-EEE--------------eecCCCEEEEEec-
Confidence 78999999 799999999999999999999999877665433211 111 1111234444443
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
++.+++|+..... ..+..+ .+|...+..+.+++++++++++ .|+.|++||++ .++..... ......+...|
T Consensus 128 -~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~---~~~~~~~~~~v 199 (318)
T 4ggc_A 128 -SGHIHHHDVRVAE--HHVATL-SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA-PGEGGWVP---LQTFTQHQGAV 199 (318)
T ss_dssp -TSEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS-CBTTBSCC---SEEECCCCSCE
T ss_pred -CCceEeeecCCCc--eeEEEE-cCccCceEEEEEcCCCCEEEEEecCcceeEEECC-CCcccccc---eeeecccCCce
Confidence 7788999886533 233333 7899999999999999999999 99999999998 33321110 01145677889
Q ss_pred EEEEEeCCCCCEE--EEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee--
Q 015290 271 TSAEFHPIYCNLL--AYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-- 346 (409)
Q Consensus 271 ~~~~~~p~~~~~l--~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-- 346 (409)
.++.++|++...+ ++++.++.|++||.+..... .... +...+..+.|+|++..+++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~----~~~~--------------~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 200 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL----SAVD--------------AHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp EEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE----EEEE--------------CSSCEEEEEEETTTTEEEEEECT
T ss_pred EEEEecCCCCcEEEEEecCCCCEEEEEeccccccc----cccc--------------ceeeeeeeeecccccceEEEEEc
Confidence 9999999885554 45678899999999876531 1111 245789999999999887653
Q ss_pred -cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 347 -YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 347 -~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
|+.|++||+++ ++++..+.+|...+ ++++|+|||++|||||.||+|
T Consensus 262 ~d~~i~iwd~~~-~~~~~~l~gH~~~V---------------~~l~~spdg~~l~S~s~D~~v 308 (318)
T 4ggc_A 262 AQNQLVIWKYPT-MAKVAELKGHTSRV---------------LSLTMSPDGATVASAAADETL 308 (318)
T ss_dssp TTCCEEEEETTT-CCEEEEECCCSSCE---------------EEEEECTTSSCEEEEETTTEE
T ss_pred CCCEEEEEECCC-CcEEEEEcCCCCCE---------------EEEEEcCCCCEEEEEecCCeE
Confidence 49999999986 89999999999876 699999999999999999986
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=269.53 Aligned_cols=257 Identities=12% Similarity=0.052 Sum_probs=188.0
Q ss_pred cccCCCcEEEEEECCCC---------CEEEE-------------------EecCCeEEEEeccCCcCCCCccchhhhhhh
Q 015290 28 ELQDVDIVSAIEFDKTG---------DYLAV-------------------GDRGGRVILFETVGGKNTPNQHISRSELEK 79 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~---------~~la~-------------------~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 79 (409)
.+.+.+.|.+|+|+|++ ++||+ ++.|++|+||++.+++.
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~------------- 195 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTL------------- 195 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTC-------------
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCC-------------
Confidence 44467889999999976 67766 44778999999987653
Q ss_pred cccccccCCCceeeeeeecCCCccccccccceeccceEEEEEEec----CCCCEEEEEeCCCeEEEEEcCCceeeeeecc
Q 015290 80 QMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWCAA----PNGSMFILSTNDKTIKLWKVRDQKVKKIKEM 155 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~~s----~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 155 (409)
.......+.+|. +.|.+++|+|. +++.+|++++.|++|++||+.++........
T Consensus 196 ----------~~~~~~~l~~~~------------~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 196 ----------HCVKVQTIVHSF------------GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp ----------CEEEEEEEEECC------------CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred ----------CceEEEEEEecC------------CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 111123456666 78999999542 2367999999999999999976532100000
Q ss_pred CCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEE
Q 015290 156 DHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS 235 (409)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 235 (409)
.. ..+...+ .+|...|.+++|++++ .|++
T Consensus 254 ~~-------------------------------------------------~~p~~~l-~~h~~~v~sv~~s~~~-~las 282 (524)
T 2j04_B 254 MC-------------------------------------------------EKPSLTL-SLADSLITTFDFLSPT-TVVC 282 (524)
T ss_dssp CC-------------------------------------------------CSCSEEE-CCTTTCEEEEEESSSS-EEEE
T ss_pred ee-------------------------------------------------cCceEEE-EcCCCCEEEEEecCCC-eEEE
Confidence 00 0112222 6789999999999864 7999
Q ss_pred e-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEE--EEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccc
Q 015290 236 A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSA--EFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRD 312 (409)
Q Consensus 236 ~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 312 (409)
| .||+|++||++........ +.+|...|+++ +|+|+++++|++++.|++|++||+++++. ...+..
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~-------~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~----~~~~~~ 351 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFY-------DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT----TKTTVS 351 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEE-------EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH----HCEEEE
T ss_pred EeCCCEEEEEECCCCCCceEE-------eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc----cccccc
Confidence 9 9999999999833233333 57899999999 56777547899999999999999988653 122322
Q ss_pred cccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEE
Q 015290 313 AAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECS 391 (409)
Q Consensus 313 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 391 (409)
|.. ...|.+++|+|+++.++++++ ++|++||++. +.++..+.+|...+ ++++
T Consensus 352 ~~~-----------~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V---------------~sva 404 (524)
T 2j04_B 352 RFR-----------GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA-AFAVHPLVSRETTI---------------TAIG 404 (524)
T ss_dssp ECS-----------CCSCCCEEEETTTTEEEEECSSSEEEEEETTC-TTCCEEEEECSSCE---------------EEEE
T ss_pred ccc-----------cCcccceEeCCCcCeEEEeCCCCcEEEEECcc-cccceeeecCCCce---------------EEEE
Confidence 110 124789999999999998875 9999999986 77888888999876 6999
Q ss_pred EcCCCCeEEEcccCCCC
Q 015290 392 VSGDGLHFATGSYRRDN 408 (409)
Q Consensus 392 ~spdg~~l~s~s~dg~i 408 (409)
|||+|++|++|+.||+|
T Consensus 405 ~Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 405 VSRLHPMVLAGSADGSL 421 (524)
T ss_dssp CCSSCCBCEEEETTTEE
T ss_pred eCCCCCeEEEEECCCEE
Confidence 99999999999999986
No 60
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6e-33 Score=247.44 Aligned_cols=248 Identities=16% Similarity=0.218 Sum_probs=193.1
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
|...|.+++|+|+|.+||+|+.|+.+++|++...... ........+.+|.
T Consensus 105 ~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~---------------------~~~~~~~~~~~h~--------- 154 (354)
T 2pbi_B 105 PCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE---------------------NMAAKKKSVAMHT--------- 154 (354)
T ss_dssp SSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC---------------------CSGGGCEEEEECS---------
T ss_pred CCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc---------------------cccccceeeeccC---------
Confidence 6778999999999999999999999999998754320 0011234566788
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
+.|.+++| ++++..|++++.|++|++||+.+++.......+.. .+.++ ....++++..+++++.
T Consensus 155 ---~~v~~~~~--~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~-~v~~~----------~~~~~~~g~~l~sgs~ 218 (354)
T 2pbi_B 155 ---NYLSACSF--TNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA-DVLCL----------DLAPSETGNTFVSGGC 218 (354)
T ss_dssp ---SCEEEEEE--CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEE----------EECCCSSCCEEEEEET
T ss_pred ---CcEEEEEE--eCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC-CeEEE----------EEEeCCCCCEEEEEeC
Confidence 89999999 78999999999999999999998877655442211 11111 1122234456666665
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 269 (409)
|+.+++||+.+ ++++..+ .+|...|.+++|+|++++|++| .|++|++||++ ....+..+. ...+...
T Consensus 219 --Dg~v~~wd~~~---~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~-~~~~~~~~~-----~~~~~~~ 286 (354)
T 2pbi_B 219 --DKKAMVWDMRS---GQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR-ADREVAIYS-----KESIIFG 286 (354)
T ss_dssp --TSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEEC-----CTTCCSC
T ss_pred --CCeEEEEECCC---CcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC-CCcEEEEEc-----CCCcccc
Confidence 99999999976 4566666 7899999999999999999999 99999999998 555444421 1233457
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-C
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M 348 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~ 348 (409)
+.+++|+|++ .+|++|+.|+.|++||+.+++. +.. +.+|...|++++|+|+|++|++|+. +
T Consensus 287 ~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~~----~~~-------------l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 287 ASSVDFSLSG-RLLFAGYNDYTINVWDVLKGSR----VSI-------------LFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp EEEEEECTTS-SEEEEEETTSCEEEEETTTCSE----EEE-------------ECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred eeEEEEeCCC-CEEEEEECCCcEEEEECCCCce----EEE-------------EECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 8999999999 9999999999999999987653 122 2446789999999999999999984 9
Q ss_pred eEEEEE
Q 015290 349 NLKLWD 354 (409)
Q Consensus 349 ~v~iwd 354 (409)
.|+||+
T Consensus 349 ~v~vW~ 354 (354)
T 2pbi_B 349 TLRVWA 354 (354)
T ss_dssp EEEEEC
T ss_pred CEEecC
Confidence 999996
No 61
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6e-33 Score=286.67 Aligned_cols=249 Identities=16% Similarity=0.256 Sum_probs=186.1
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..+|.+.|++++|+|+|++||+|+.||.|++||+.+++ .+..+.+|.
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~---------------------------~~~~~~~h~------ 657 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE---------------------------KLLDIKAHE------ 657 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---------------------------EEEEECCCS------
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC---------------------------EEEEeccCC------
Confidence 34699999999999999999999999999999998876 467788999
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCC--CCcee
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP--SFAHG 185 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 185 (409)
+.|.+++| +|++++|++++.|++|++||+.+++.......+. ..+..+.+++ ...++
T Consensus 658 ------~~v~~~~~--s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~~~l 716 (1249)
T 3sfz_A 658 ------DEVLCCAF--SSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS-------------EQVNCCHFTNKSNHLLL 716 (1249)
T ss_dssp ------SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS-------------SCEEEEEECSSSSCCEE
T ss_pred ------CCEEEEEE--ecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC-------------CcEEEEEEecCCCceEE
Confidence 89999999 7999999999999999999999987766544221 2222333333 33345
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCC----
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKP---- 260 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~---- 260 (409)
++++. |+.|++||+.+ +.+...+ .+|...|.+++|+|++++++++ .||.|++||+. .+.....+....
T Consensus 717 ~sg~~--d~~v~vwd~~~---~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~-~~~~~~~~~~~~~~~~ 789 (1249)
T 3sfz_A 717 ATGSN--DFFLKLWDLNQ---KECRNTM-FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR-SANERKSINVKRFFLS 789 (1249)
T ss_dssp EEEET--TSCEEEEETTS---SSEEEEE-CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG-GTEEEEEEECCCCC--
T ss_pred EEEeC--CCeEEEEECCC---cchhhee-cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC-CCcccceecccccccc
Confidence 55544 89999999976 4555555 7899999999999999999999 99999999998 444333322110
Q ss_pred ---------------------------------------C-----cCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 015290 261 ---------------------------------------S-----NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 296 (409)
Q Consensus 261 ---------------------------------------~-----~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd 296 (409)
. ...+|...+.+++|+|++ .++++++.||.|++||
T Consensus 790 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~v~vwd 868 (1249)
T 3sfz_A 790 SEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWN 868 (1249)
T ss_dssp ------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST-TEEEEECSSSCEEEEE
T ss_pred cCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEE
Confidence 0 012677889999999999 9999999999999999
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEc
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDI 355 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~ 355 (409)
+.++... ..+ .+|...|.+++|+|+|++|++++. +.|++||+
T Consensus 869 ~~~~~~~----~~~-------------~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 869 IDSRLKV----ADC-------------RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp TTTTEEE----EEE-------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred cCCCcee----eec-------------CCCccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 9876431 222 223445555555555555555543 55555553
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.7e-34 Score=262.67 Aligned_cols=277 Identities=17% Similarity=0.176 Sum_probs=208.8
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
+.+++++|+|++++|++|+.||.|++||+.+.+. ...+..|.
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~---------------------------~~~~~~~~----------- 98 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDG---------------------------SKMLKRAD----------- 98 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEET---------------------------TTTSCSCC-----------
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccce---------------------------eeEEecCC-----------
Confidence 3456899999999999999999999999987653 12223332
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
.+....| ++++++|++++.|+.|++||+.+++....... ....+..+.+++++.++++++.
T Consensus 99 --~~~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~l~s~s~-- 159 (420)
T 3vl1_A 99 --YTAVDTA--KLQMRRFILGTTEGDIKVLDSNFNLQREIDQA-------------HVSEITKLKFFPSGEALISSSQ-- 159 (420)
T ss_dssp --EEEEEEE--CSSSCEEEEEETTSCEEEECTTSCEEEEETTS-------------SSSCEEEEEECTTSSEEEEEET--
T ss_pred --ceEEEEE--ecCCCEEEEEECCCCEEEEeCCCcceeeeccc-------------ccCccEEEEECCCCCEEEEEeC--
Confidence 3344455 79999999999999999999998876654322 1233445556666677777665
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc--
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV-- 269 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~-- 269 (409)
|+.|++||+.+ .+++..+ .+|...|.+++|+|++++|+++ .|+.|++||++ .++.+..+... ..+...
T Consensus 160 d~~i~iwd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~~----~~~~~~v~ 230 (420)
T 3vl1_A 160 DMQLKIWSVKD---GSNPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG-TGTTIHTFNRK----ENPHDGVN 230 (420)
T ss_dssp TSEEEEEETTT---CCCCEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT-TTEEEEEECBT----TBTTCCEE
T ss_pred CCeEEEEeCCC---CcCceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC-CCceeEEeecC----CCCCCCcc
Confidence 89999999976 3455555 7899999999999999999999 99999999999 66666654221 123334
Q ss_pred -------------------eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccce
Q 015290 270 -------------------ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 330 (409)
Q Consensus 270 -------------------v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 330 (409)
+.+++|+|++ ++|++|+.||.|++||+++++.. ..+ ...|...+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~----~~~------------~~~~~~~v 293 (420)
T 3vl1_A 231 SIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQT----IQL------------PSKFTCSC 293 (420)
T ss_dssp EEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEE----EEE------------CCTTSSCE
T ss_pred EEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCcee----EEc------------ccccCCCc
Confidence 4445557888 99999999999999999886532 111 12346789
Q ss_pred eeeEeccCCC-EEEEeec-CeEEEEEccCCCcceEEEeccc-CcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 331 SDIKFANDGQ-HLLSRDY-MNLKLWDIRMDSTPVATFKIHE-HLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 331 ~~~~~s~~g~-~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
.+++|+|+++ +|++|+. +.|++||+++...++..+..|. ..+ .++ +.+++++|++++.||+
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v---------------~~~-~~~~~~~l~s~~~d~~ 357 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPI---------------NNV-YFAAGALFVSSGFDTS 357 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCE---------------EEE-EEETTEEEEEETTTEE
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCc---------------eEE-EeCCCCEEEEecCCcc
Confidence 9999999998 9999875 9999999987445678888744 333 345 5668899999999987
Q ss_pred C
Q 015290 408 N 408 (409)
Q Consensus 408 i 408 (409)
|
T Consensus 358 v 358 (420)
T 3vl1_A 358 I 358 (420)
T ss_dssp E
T ss_pred E
Confidence 5
No 63
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-33 Score=245.60 Aligned_cols=253 Identities=14% Similarity=0.226 Sum_probs=181.5
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
|.+.|.+++|+|++++||+|+.|+.|+||++...... ....+.+..+.+|.
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~--------------------~~~~~~~~~~~~h~--------- 107 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR--------------------TFEMDLLAIIEGHE--------- 107 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC---------------------------CCCEEEEEEC------------
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc--------------------cccceeEEEEcCCC---------
Confidence 8999999999999999999999999999998643210 00224567788999
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCc-e---eeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQ-K---VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
+.|.+++| +|++++|++++.|++|++||+... . ....... ....+..+.++++..+++
T Consensus 108 ---~~V~~v~~--sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~-------------h~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 108 ---NEVKGVAW--SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE-------------HSQDVKHVIWHPSEALLA 169 (330)
T ss_dssp ----CEEEEEE--CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC-------------CSSCEEEEEECSSSSEEE
T ss_pred ---CcEEEEEE--CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc-------------CCCceEEEEECCCCCEEE
Confidence 89999999 799999999999999999999532 1 2222111 123344555667777777
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC--CCeEEEe-cCCeEEEEEccCCC-------ceeeee
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISD-------QCFNIV 256 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~-~d~~i~lwd~~~~~-------~~~~~~ 256 (409)
+++. |+.|++|+..... .+++..+ .+|...|.+++|+|+ +..|++| .|++|++||++... .....
T Consensus 170 s~s~--D~~i~iW~~~~~~-~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~- 244 (330)
T 2hes_X 170 SSSY--DDTVRIWKDYDDD-WECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI- 244 (330)
T ss_dssp EEET--TSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE-
T ss_pred EEcC--CCeEEEEECCCCC-eeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee-
Confidence 7776 9999999986521 2455665 899999999999998 6789999 99999999997221 12222
Q ss_pred ecCCCcCcC-ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccccc-ceeeeE
Q 015290 257 DMKPSNMDD-LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA-SISDIK 334 (409)
Q Consensus 257 ~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~ 334 (409)
+.+ |...|++++|+++ .+|++++.||.|++||..+++. ..... .+.+|.. .|.+++
T Consensus 245 ------~~~~h~~~v~~v~~s~~--~~l~s~~~dg~v~iw~~~~~~~-----~~~~~---------~~~~h~~~~v~~v~ 302 (330)
T 2hes_X 245 ------LPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEVDGEW-----KVFAK---------RALCHGVYEINVVK 302 (330)
T ss_dssp ------CCSCCSSCEEEEEECTT--SCEEEEETTSCEEEEEEETTEE-----EEEEE---------ESCTTTTSCEEEEE
T ss_pred ------cccccccceEEEEEcCC--CEEEEEeCCCEEEEEEcCCCce-----EEEec---------cccccccceEEEEE
Confidence 333 8899999999976 4799999999999999876531 00100 0123444 799999
Q ss_pred ecc--CCCEEEEee-cCeEEEEEccC
Q 015290 335 FAN--DGQHLLSRD-YMNLKLWDIRM 357 (409)
Q Consensus 335 ~s~--~g~~l~sg~-~~~v~iwd~~~ 357 (409)
|+| ++++|++|+ |+.|+|||+..
T Consensus 303 ~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 303 WLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EC-----CCEEEEETTSEEEEEEC--
T ss_pred EecCCCceEEEEecCCCcEEEEEecc
Confidence 999 789999987 49999999863
No 64
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.5e-33 Score=275.73 Aligned_cols=277 Identities=15% Similarity=0.161 Sum_probs=223.5
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|.+.|++++|+|++++||+|+.||.|+|||+.++. .+..+.+|.
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~---------------------------~~~~~~~~~-------- 55 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV---------------------------EVRSIQVTE-------- 55 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---------------------------EEEEEECCS--------
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc---------------------------eEEEEecCC--------
Confidence 489999999999999999999999999999998766 466788898
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
+.|.+++| +|++++|++++.|+.|++||+.+++.......+ .+.+..+.+++++..++++.
T Consensus 56 ----~~v~~~~~--s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~~~ 116 (814)
T 3mkq_A 56 ----TPVRAGKF--IARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-------------PDYIRSIAVHPTKPYVLSGS 116 (814)
T ss_dssp ----SCEEEEEE--EGGGTEEEEEETTSEEEEEETTTCCEEEEEECC-------------SSCEEEEEECSSSSEEEEEE
T ss_pred ----CcEEEEEE--eCCCCEEEEEeCCCeEEEEECCCCcEEEEEecC-------------CCCEEEEEEeCCCCEEEEEc
Confidence 89999999 689999999999999999999988766554322 23345556667777777666
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
. ++.+++|++++. ......+ .+|...|.+++|+| +++.++++ .||.|++||+. .+.....+ ...+.
T Consensus 117 ~--dg~i~vw~~~~~--~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~-~~~~~~~~------~~~~~ 184 (814)
T 3mkq_A 117 D--DLTVKLWNWENN--WALEQTF-EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG-QSTPNFTL------TTGQE 184 (814)
T ss_dssp T--TSEEEEEEGGGT--SEEEEEE-ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT-CSSCSEEE------ECCCT
T ss_pred C--CCEEEEEECCCC--ceEEEEE-cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCcceeEE------ecCCC
Confidence 4 899999999753 1333444 78999999999999 78899999 99999999998 44444332 23445
Q ss_pred CceEEEEEeC--CCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 268 EVITSAEFHP--IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 268 ~~v~~~~~~p--~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
..+.+++|+| ++ .+|++++.||.|++||+++++. ...+ .+|...|.+++|+|++++|+++
T Consensus 185 ~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~----~~~~-------------~~~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 185 RGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKSC----VATL-------------EGHMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp TCCCEEEECCSTTC-CEEEEECTTSEEEEEETTTTEE----EEEE-------------ECCSSCEEEEEECSSSSEEEEE
T ss_pred CCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCCCcE----EEEE-------------cCCCCCEEEEEEcCCCCEEEEE
Confidence 7899999999 88 9999999999999999988653 2222 3346789999999999999999
Q ss_pred ec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC--eEEEcccCC
Q 015290 346 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL--HFATGSYRR 406 (409)
Q Consensus 346 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~--~l~s~s~dg 406 (409)
+. |.|++||+.+ ++.+..+..+...+ ++++|+|+|. ++++++.++
T Consensus 247 ~~dg~v~vwd~~~-~~~~~~~~~~~~~v---------------~~~~~~~~~~~~~~~~~~~~~ 294 (814)
T 3mkq_A 247 SEDGTLKIWNSST-YKVEKTLNVGLERS---------------WCIATHPTGRKNYIASGFDNG 294 (814)
T ss_dssp ETTSCEEEEETTT-CSEEEEECCSSSSE---------------EEEEECTTCGGGEEEEEETTE
T ss_pred eCCCeEEEEECCC-CcEEEEeecCCCcE---------------EEEEEccCCCceEEEEEeCCC
Confidence 74 9999999986 78888888877654 6899999887 466666544
No 65
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-32 Score=255.50 Aligned_cols=285 Identities=14% Similarity=0.154 Sum_probs=211.9
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|.+.|++++|+|++ +|++|+.||+|++||+.+++ .+..+.+|.
T Consensus 160 ~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~---------------------------~~~~~~~h~-------- 203 (464)
T 3v7d_B 160 GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC---------------------------CTHVFEGHN-------- 203 (464)
T ss_dssp CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE---------------------------EEEEECCCS--------
T ss_pred CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc---------------------------EEEEECCCC--------
Confidence 499999999999988 99999999999999998776 467788898
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccc---------cccccccccCceeccCCC
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVS---------SENTLLAEKNFMNEHNPP 180 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 180 (409)
+.|.+++|.|.+++.+|++++.|++|++||+.++............... .+.........+... .+
T Consensus 204 ----~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~ 278 (464)
T 3v7d_B 204 ----STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV-SG 278 (464)
T ss_dssp ----SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE-EE
T ss_pred ----CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE-cC
Confidence 8999999977688899999999999999999876543321111000000 000000011111111 22
Q ss_pred CCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecC
Q 015290 181 SFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMK 259 (409)
Q Consensus 181 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~ 259 (409)
...+++.+.. ++.|++||+.+ .+++..+ .+|...|.+++|+|+++++++| .|+.|++||++ .+..+..
T Consensus 279 ~~~~l~~~~~--d~~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~-~~~~~~~---- 347 (464)
T 3v7d_B 279 HGNIVVSGSY--DNTLIVWDVAQ---MKCLYIL-SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE-NGELMYT---- 347 (464)
T ss_dssp ETTEEEEEET--TSCEEEEETTT---TEEEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT-TTEEEEE----
T ss_pred CCCEEEEEeC--CCeEEEEECCC---CcEEEEe-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCcEEEE----
Confidence 3345555544 88999999976 5566666 7899999999999999999999 99999999998 6777766
Q ss_pred CCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCC
Q 015290 260 PSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG 339 (409)
Q Consensus 260 ~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 339 (409)
+.+|...|.+++|+ + .+|++++.||.|++||++++.. .+.. .+...+..++|+|++
T Consensus 348 ---~~~h~~~v~~~~~~--~-~~l~s~s~dg~v~vwd~~~~~~------~~~~------------~~~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 348 ---LQGHTALVGLLRLS--D-KFLVSAAADGSIRGWDANDYSR------KFSY------------HHTNLSAITTFYVSD 403 (464)
T ss_dssp ---ECCCSSCEEEEEEC--S-SEEEEEETTSEEEEEETTTCCE------EEEE------------ECTTCCCEEEEEECS
T ss_pred ---EeCCCCcEEEEEEc--C-CEEEEEeCCCcEEEEECCCCce------eeee------------cCCCCccEEEEEeCC
Confidence 67899999999997 4 7899999999999999988642 1111 113567888999999
Q ss_pred CEEEEeecCeEEEEEccCCCcceEE-EecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 340 QHLLSRDYMNLKLWDIRMDSTPVAT-FKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 340 ~~l~sg~~~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
++|++|+++.|++||+.+ ++++.. +..|...+ ++++|+ ++.++++++.||.
T Consensus 404 ~~l~~~~dg~i~iwd~~~-g~~~~~~~~~~~~~v---------------~~v~~~-~~~l~~~~~~~g~ 455 (464)
T 3v7d_B 404 NILVSGSENQFNIYNLRS-GKLVHANILKDADQI---------------WSVNFK-GKTLVAAVEKDGQ 455 (464)
T ss_dssp SEEEEEETTEEEEEETTT-CCEEESCTTTTCSEE---------------EEEEEE-TTEEEEEEEETTE
T ss_pred CEEEEecCCeEEEEECCC-CcEEehhhccCCCcE---------------EEEEec-CCEEEEEEEeCCe
Confidence 999999999999999986 777664 44454443 689997 4445556666653
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.2e-33 Score=247.57 Aligned_cols=280 Identities=12% Similarity=0.067 Sum_probs=214.5
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
+.+.|.+++|+|||++++++..++.+.+|...... ......+|.
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~h~--------- 51 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHA---------------------------RQINTLNHG--------- 51 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEE---------------------------EEEEEECCS---------
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCcc---------------------------ccceeccCC---------
Confidence 56789999999999999998877766666543322 122334677
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
+.|.+++| +|++++|++++ |+.|++||+.++........ +........+..+.+++++..++.+..
T Consensus 52 ---~~v~~~~~--~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~ 117 (337)
T 1gxr_A 52 ---EVVCAVTI--SNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ--------LDCLNRDNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp ---SCCCEEEE--CSSSSEEEEEC-BSEEEEEETTSTTCCSCSEE--------EECSCTTSBEEEEEECTTSSEEEEEES
T ss_pred ---CceEEEEE--ecCCcEEEEcC-CCeEEEEECCCCCceeeeec--------ccccCCCCcEEEEEEcCCCCEEEEEcC
Confidence 89999999 79999999998 99999999987643221110 000012234445556666667776654
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 269 (409)
++.+++|+++.... .....+ ..|...+.+++|+|++++++++ .|+.|++||++ .++.... +..|...
T Consensus 118 --d~~i~~~d~~~~~~-~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~-~~~~~~~-------~~~~~~~ 185 (337)
T 1gxr_A 118 --ASTLSIWDLAAPTP-RIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQ-------FQGHTDG 185 (337)
T ss_dssp --SSEEEEEECCCC---EEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEE-------ECCCSSC
T ss_pred --CCcEEEEECCCCCc-ceeeec-ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC-CCceeee-------eecccCc
Confidence 88999999987432 233333 6788999999999999999999 99999999998 6666655 5678899
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-C
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M 348 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~ 348 (409)
+.+++|+|++ ++|++++.||.|++||+++++.. ..+. +...+.+++|+|++++|++++. +
T Consensus 186 i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~----~~~~--------------~~~~v~~~~~s~~~~~l~~~~~~~ 246 (337)
T 1gxr_A 186 ASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQL----QQHD--------------FTSQIFSLGYCPTGEWLAVGMESS 246 (337)
T ss_dssp EEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE----EEEE--------------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEECCCC-CEEEEEecCCcEEEEECCCCceE----eeec--------------CCCceEEEEECCCCCEEEEEcCCC
Confidence 9999999999 99999999999999999987531 2222 2467999999999999999975 9
Q ss_pred eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 349 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 349 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
.|++||++. ++ ...+..|...+ .+++|+|++++|++++.||.|
T Consensus 247 ~i~~~~~~~-~~-~~~~~~~~~~v---------------~~~~~~~~~~~l~~~~~dg~i 289 (337)
T 1gxr_A 247 NVEVLHVNK-PD-KYQLHLHESCV---------------LSLKFAYCGKWFVSTGKDNLL 289 (337)
T ss_dssp CEEEEETTS-SC-EEEECCCSSCE---------------EEEEECTTSSEEEEEETTSEE
T ss_pred cEEEEECCC-CC-eEEEcCCccce---------------eEEEECCCCCEEEEecCCCcE
Confidence 999999985 33 44666676654 699999999999999999875
No 67
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=262.34 Aligned_cols=290 Identities=8% Similarity=0.042 Sum_probs=195.8
Q ss_pred cCCCcEEEEEECCC------CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcc
Q 015290 30 QDVDIVSAIEFDKT------GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPE 103 (409)
Q Consensus 30 ~h~~~v~~v~~~~~------~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 103 (409)
.|.+.|.+++|+|+ +.+||+|+.||+|+|||+.++.... . ..+ ...++...+.+|.
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~--~---~~~-----------~~~~p~~~l~~h~-- 266 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV--H---VFK-----------MCEKPSLTLSLAD-- 266 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS--S---EEE-----------CCCSCSEEECCTT--
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc--c---cce-----------eecCceEEEEcCC--
Confidence 46789999999997 5799999999999999998654210 0 000 0001234577888
Q ss_pred ccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceee-eeeccCCCcccccccccccccCceec--cCCC
Q 015290 104 FDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVK-KIKEMDHFPFVSSENTLLAEKNFMNE--HNPP 180 (409)
Q Consensus 104 ~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 180 (409)
..|++++| +++ ..|++|+.||+|++||+.++... .....+ ...+.++ .+++
T Consensus 267 ----------~~v~sv~~--s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H-------------~~~V~sv~~~~s~ 320 (524)
T 2j04_B 267 ----------SLITTFDF--LSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVH-------------DSYILSVSTAYSD 320 (524)
T ss_dssp ----------TCEEEEEE--SSS-SEEEEEETTSEEEEEETTBCSSCSEEEECS-------------SSCEEEEEEECCT
T ss_pred ----------CCEEEEEe--cCC-CeEEEEeCCCEEEEEECCCCCCceEEeecc-------------cccEEEEEEEcCC
Confidence 89999999 554 48999999999999999865322 112111 1222232 3444
Q ss_pred CC-ceeecccccccceeEEEecCCcccceeeeeecccccc--ceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeee
Q 015290 181 SF-AHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDF--NINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIV 256 (409)
Q Consensus 181 ~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~ 256 (409)
.+ .++++++. |+++++||+.+. ++...+ .+|.. .|.+++|+|+++.++++ .|++|++||++ .+.++..
T Consensus 321 ~g~~~laS~S~--D~tvklWD~~~~---~~~~~~-~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~-~~~~~~~- 392 (524)
T 2j04_B 321 FEDTVVSTVAV--DGYFYIFNPKDI---ATTKTT-VSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR-AAFAVHP- 392 (524)
T ss_dssp TSCCEEEEEET--TSEEEEECGGGH---HHHCEE-EEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETT-CTTCCEE-
T ss_pred CCCeEEEEecc--CCeEEEEECCCC---Cccccc-ccccccCcccceEeCCCcCeEEEeCCCCcEEEEECc-cccccee-
Confidence 44 66777766 999999999763 333333 34442 47899999999999998 99999999999 5555554
Q ss_pred ecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEec
Q 015290 257 DMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA 336 (409)
Q Consensus 257 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 336 (409)
+.+|.+.|++++|+|++ ++|++|+.||+|++||+..+.. ..... ... ..+...+.+++|+
T Consensus 393 ------l~gH~~~V~sva~Sp~g-~~l~Sgs~Dgtv~lwd~~~~~~-----~~~~~---~~~-----~~~~~~v~~v~~s 452 (524)
T 2j04_B 393 ------LVSRETTITAIGVSRLH-PMVLAGSADGSLIITNAARRLL-----HGIKN---SSA-----TQKSLRLWKWDYS 452 (524)
T ss_dssp ------EEECSSCEEEEECCSSC-CBCEEEETTTEEECCBSCSSTT-----TCC--------------CCCCEEEECBCC
T ss_pred ------eecCCCceEEEEeCCCC-CeEEEEECCCEEEEEechHhhc-----ccccc---Ccc-----ceeeeEEEEeccC
Confidence 56799999999999999 9999999999999999865321 11111 000 0012257899999
Q ss_pred cCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC---eEEEcccCCCC
Q 015290 337 NDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL---HFATGSYRRDN 408 (409)
Q Consensus 337 ~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~---~l~s~s~dg~i 408 (409)
|+|+.+.. .+ .+++|+....+..+..+.+|...+ .+++|+|++. .||+|+.||+|
T Consensus 453 p~g~~~~~-~~-~~~~~~~~~~g~~~~~l~gh~~~V---------------~~Vafsp~~~~~~~lAsg~~~g~v 510 (524)
T 2j04_B 453 IKDDKYRI-DS-SYEVYPLTVNDVSKAKIDAHGINI---------------TCTKWNETSAGGKCYAFSNSAGLL 510 (524)
T ss_dssp SSSCEEEE-CC-CCCCCC-------------CCCSC---------------CCEEECCSTTTTTEEEEECTTSEE
T ss_pred CCCCeEEc-cC-CceecccccCCcceeeecCCCceE---------------EEEECCCCCCccHHHHhhccCceE
Confidence 99985533 22 233443322267788888998876 5999999964 99999999976
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.9e-32 Score=246.70 Aligned_cols=277 Identities=12% Similarity=0.080 Sum_probs=203.8
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
..+....|+|++++||+|+.||.|++||+.+++ ....+.+|.
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------------------------~~~~~~~h~----------- 139 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL---------------------------QREIDQAHV----------- 139 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE---------------------------EEEETTSSS-----------
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc---------------------------eeeeccccc-----------
Confidence 556666889999999999999999999998665 456678898
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
+.|.+++| +|++++|++++.|++|++||+.+++.......+ ...+..+.+++++..+++++.
T Consensus 140 -~~v~~~~~--~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~l~s~~~-- 201 (420)
T 3vl1_A 140 -SEITKLKF--FPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH-------------RATVTDIAIIDRGRNVLSASL-- 201 (420)
T ss_dssp -SCEEEEEE--CTTSSEEEEEETTSEEEEEETTTCCCCEEEECC-------------SSCEEEEEEETTTTEEEEEET--
T ss_pred -CccEEEEE--CCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC-------------CCcEEEEEEcCCCCEEEEEcC--
Confidence 89999999 789999999999999999999988765544321 223344445556666666655
Q ss_pred cceeEEEecCCcccceeeeeec--ccc---------------------ccceeEEEeCCCCCeEEEe-cCCeEEEEEccC
Q 015290 193 NMATKIANVGNSVHARCQKVYP--HAH---------------------DFNINSISNNSDCETFVSA-DDLRINLWNLEI 248 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~--~~~---------------------~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~ 248 (409)
|+.+++||+.+. +++..+. ..+ ...+.+++|+|++++|++| .||.|++||++
T Consensus 202 d~~v~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~- 277 (420)
T 3vl1_A 202 DGTIRLWECGTG---TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF- 277 (420)
T ss_dssp TSCEEEEETTTT---EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT-
T ss_pred CCcEEEeECCCC---ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC-
Confidence 899999999864 3333331 123 3445556678999999999 99999999998
Q ss_pred CCceeeeeecCCCcCcCccCceEEEEEeCCCCC-EEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccc
Q 015290 249 SDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCN-LLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 327 (409)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (409)
.+.....+ ...|...|.+++|+|++ . +|++|+.||.|++||+++++.. ...+.. .|.
T Consensus 278 ~~~~~~~~------~~~~~~~v~~~~~~~~~-~~~l~~g~~dg~i~vwd~~~~~~~---~~~~~~------------~~~ 335 (420)
T 3vl1_A 278 SKEQTIQL------PSKFTCSCNSLTVDGNN-ANYIYAGYENGMLAQWDLRSPECP---VGEFLI------------NEG 335 (420)
T ss_dssp TCCEEEEE------CCTTSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCTTSC---SEEEEE------------STT
T ss_pred CCceeEEc------ccccCCCceeEEEeCCC-CCEEEEEeCCCeEEEEEcCCCcCc---hhhhhc------------cCC
Confidence 45444432 45688899999999999 6 9999999999999999886421 122222 134
Q ss_pred cceeeeEeccCCCEEEEee-cCeEEEEEccCCCcc--------eEEEecccCcccccccccCCCCccceeeEEEcCCCC-
Q 015290 328 ASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTP--------VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL- 397 (409)
Q Consensus 328 ~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~- 397 (409)
..+.++.+ +++++|++++ |+.|++||+....++ ...+..|...+ .+++|+|+++
T Consensus 336 ~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v---------------~~~~~s~~~~~ 399 (420)
T 3vl1_A 336 TPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAV---------------SQFCYVSDDES 399 (420)
T ss_dssp SCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCC---------------CEEEEECCSSS
T ss_pred CCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcce---------------EEEEEccCCCC
Confidence 57887755 5788999987 599999998752222 22233344433 6999999999
Q ss_pred --eEEEcccCCC
Q 015290 398 --HFATGSYRRD 407 (409)
Q Consensus 398 --~l~s~s~dg~ 407 (409)
.|++++.+|.
T Consensus 400 ~g~l~a~g~~g~ 411 (420)
T 3vl1_A 400 NGEVLEVGKNNF 411 (420)
T ss_dssp SCEEEEEETTTE
T ss_pred cceEEEEcCCce
Confidence 5666665654
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=272.34 Aligned_cols=211 Identities=14% Similarity=0.107 Sum_probs=162.7
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|++++||+|+.||.|+||+..+.+. ... ..|.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~---------------------------~~~-~~~~------- 58 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEV---------------------------VIK-LEDR------- 58 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEE---------------------------EEE-CSSC-------
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEE---------------------------EEE-cCCC-------
Confidence 35899999999999999999999999999999876542 222 2355
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+++| +| +++|++++.|++|++||+.+++...... ..+.+..+.+++++.+++.+
T Consensus 59 -----~~V~~l~f--sp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~--------------~~~~V~~v~~sp~g~~l~sg 116 (902)
T 2oaj_A 59 -----SAIKEMRF--VK-GIYLVVINAKDTVYVLSLYSQKVLTTVF--------------VPGKITSIDTDASLDWMLIG 116 (902)
T ss_dssp -----CCEEEEEE--ET-TTEEEEEETTCEEEEEETTTCSEEEEEE--------------CSSCEEEEECCTTCSEEEEE
T ss_pred -----CCEEEEEE--cC-CCEEEEEECcCeEEEEECCCCcEEEEEc--------------CCCCEEEEEECCCCCEEEEE
Confidence 79999999 57 7799999999999999999887655432 11345566667777888877
Q ss_pred cccccceeEEEecCCcccceeee-------eeccccccceeEEEeCCC-CCeEEEe-cCCeEEEEEccCCCceeeeeecC
Q 015290 189 EWTENMATKIANVGNSVHARCQK-------VYPHAHDFNINSISNNSD-CETFVSA-DDLRINLWNLEISDQCFNIVDMK 259 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~v~~l~~~~~-~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~ 259 (409)
.. ++.|++||+++........ ..+.+|.+.|.+++|+|+ +..+++| .|+.| +||++ .+..+..+...
T Consensus 117 s~--dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~-~~~~~~~~~~~ 192 (902)
T 2oaj_A 117 LQ--NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLV-ENEIKQSFIYE 192 (902)
T ss_dssp ET--TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETT-TTEEEEEECCC
T ss_pred cC--CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECC-CCceEEEEecc
Confidence 65 9999999998743211000 112678999999999996 4688888 99999 99999 66666554221
Q ss_pred C-----------CcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcc
Q 015290 260 P-----------SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSA 301 (409)
Q Consensus 260 ~-----------~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 301 (409)
. .....|...|++++|+|+| .+|++++.||.|++||+++++
T Consensus 193 ~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 193 LPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp BCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCC
T ss_pred cCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCc
Confidence 0 0123456789999999999 999999999999999997654
No 70
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=9.3e-32 Score=246.93 Aligned_cols=266 Identities=17% Similarity=0.269 Sum_probs=212.1
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|...|.+++| ++++|++|+.||.|++||..+++ ....+.+|.
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~---------------------------~~~~~~~h~-------- 173 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE---------------------------CKRILTGHT-------- 173 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC---------------------------EEEEECCCS--------
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe---------------------------EEEEEcCCC--------
Confidence 36678999887 78999999999999999998766 467788999
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
+.|.+++| ++++|++|+.||+|++||+.+++.......+ ...+ ....+++ ..+++++
T Consensus 174 ----~~v~~l~~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~~v------------~~l~~~~--~~l~s~s 230 (435)
T 1p22_A 174 ----GSVLCLQY----DERVIITGSSDSTVRVWDVNTGEMLNTLIHH-CEAV------------LHLRFNN--GMMVTCS 230 (435)
T ss_dssp ----SCEEEEEC----CSSEEEEEETTSCEEEEESSSCCEEEEECCC-CSCE------------EEEECCT--TEEEEEE
T ss_pred ----CcEEEEEE----CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC-CCcE------------EEEEEcC--CEEEEee
Confidence 89999998 5779999999999999999988776554422 1112 2222221 2455554
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccC
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 268 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 268 (409)
. |+.|++||+...........+ .+|...|.++++ +++++++| .|+.|++||++ .+..+.. +.+|..
T Consensus 231 ~--dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~-~~~~~~~-------~~~~~~ 297 (435)
T 1p22_A 231 K--DRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS-TCEFVRT-------LNGHKR 297 (435)
T ss_dssp T--TSCEEEEECSSSSCCEEEEEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT-TCCEEEE-------EECCSS
T ss_pred C--CCcEEEEeCCCCCCceeeeEe-cCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC-cCcEEEE-------EcCCCC
Confidence 4 899999999875544444444 789999999999 78899999 99999999999 6666665 578889
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY- 347 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~- 347 (409)
.|.++.|+ + .++++|+.||.|++||+++++. ...+ .+|...|.+++| ++++|++|+.
T Consensus 298 ~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~~~----~~~~-------------~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 298 GIACLQYR--D-RLVVSGSSDNTIRLWDIECGAC----LRVL-------------EGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp CEEEEEEE--T-TEEEEEETTSCEEEEETTTCCE----EEEE-------------CCCSSCEEEEEC--CSSEEEEEETT
T ss_pred cEEEEEeC--C-CEEEEEeCCCeEEEEECCCCCE----EEEE-------------eCCcCcEEEEEe--cCCEEEEEeCC
Confidence 99999995 5 7999999999999999998753 2333 335678999999 6889999974
Q ss_pred CeEEEEEccCCCc---------ceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 348 MNLKLWDIRMDST---------PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 348 ~~v~iwd~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
|.|++||+.. +. ++..+.+|...+ ++++| ++.+|++|+.||+|
T Consensus 356 g~i~vwd~~~-~~~~~~~~~~~~~~~~~~h~~~v---------------~~l~~--~~~~l~s~s~Dg~i 407 (435)
T 1p22_A 356 GKIKVWDLVA-ALDPRAPAGTLCLRTLVEHSGRV---------------FRLQF--DEFQIVSSSHDDTI 407 (435)
T ss_dssp SCEEEEEHHH-HTSTTSCTTTTEEEEECCCSSCC---------------CCEEE--CSSCEEECCSSSEE
T ss_pred CcEEEEECCC-CCCccccccchheeeccCCCCCe---------------EEEEe--CCCEEEEEeCCCEE
Confidence 9999999975 33 678888888876 58888 78899999999976
No 71
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-31 Score=234.34 Aligned_cols=249 Identities=21% Similarity=0.337 Sum_probs=199.9
Q ss_pred CCceeeeeeecCCCccccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCccccccccc
Q 015290 88 HPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTL 167 (409)
Q Consensus 88 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 167 (409)
.|.+.....+.+|. +.|++++| +|++++|++++.|+.|++|++.+++.......+
T Consensus 10 ~~~~~~~~~~~gh~------------~~v~~~~~--s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h----------- 64 (312)
T 4ery_A 10 KPNYALKFTLAGHT------------KAVSSVKF--SPNGEWLASSSADKLIKIWGAYDGKFEKTISGH----------- 64 (312)
T ss_dssp CCCCEEEEEECCCS------------SCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-----------
T ss_pred CCCceeEEEEcccC------------CcEEEEEE--CCCCCEEEEeeCCCeEEEEeCCCcccchhhccC-----------
Confidence 45667788899999 89999999 799999999999999999999888766554322
Q ss_pred ccccCceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEc
Q 015290 168 LAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNL 246 (409)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~ 246 (409)
...+..+.+++++.++++++. |+.|++||+++ .+++..+ .+|...|.+++|+|++++|++| .|+.|++||+
T Consensus 65 --~~~v~~~~~~~~~~~l~s~~~--d~~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~ 136 (312)
T 4ery_A 65 --KLGISDVAWSSDSNLLVSASD--DKTLKIWDVSS---GKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 136 (312)
T ss_dssp --SSCEEEEEECTTSSEEEEEET--TSEEEEEETTT---CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred --CCceEEEEEcCCCCEEEEECC--CCEEEEEECCC---CcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 123444556666777777765 89999999976 4455555 7899999999999999999999 9999999999
Q ss_pred cCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccc
Q 015290 247 EISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI 326 (409)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (409)
+ .+..+.. +..|...|.+++|+|++ ++|++++.||.|++||+++++.. ..+.. .+
T Consensus 137 ~-~~~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~----~~~~~------------~~ 191 (312)
T 4ery_A 137 K-TGKCLKT-------LPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCL----KTLID------------DD 191 (312)
T ss_dssp T-TCCEEEE-------ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEE----EEECC------------SS
T ss_pred C-CCEEEEE-------ecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcee----eEEec------------cC
Confidence 8 6666655 57788999999999999 99999999999999999886531 21111 12
Q ss_pred ccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEE-cCCCCeEEEccc
Q 015290 327 IASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSV-SGDGLHFATGSY 404 (409)
Q Consensus 327 ~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-spdg~~l~s~s~ 404 (409)
...+..++|+|++++|++++. +.|++||+++ ++++..+.+|...... ....+ .+++.+|++|+.
T Consensus 192 ~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~sg~~ 257 (312)
T 4ery_A 192 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYC-------------IFANFSVTGGKWIVSGSE 257 (312)
T ss_dssp CCCEEEEEECTTSSEEEEEETTTEEEEEETTT-TEEEEEECSSCCSSSC-------------CCEEEECSSSCEEEECCT
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEEecCCceEE-------------EEEEEEeCCCcEEEEECC
Confidence 457899999999999999974 9999999986 8888888888765321 12344 467899999999
Q ss_pred CCCC
Q 015290 405 RRDN 408 (409)
Q Consensus 405 dg~i 408 (409)
||.|
T Consensus 258 dg~i 261 (312)
T 4ery_A 258 DNLV 261 (312)
T ss_dssp TSCE
T ss_pred CCEE
Confidence 9976
No 72
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-33 Score=269.85 Aligned_cols=247 Identities=16% Similarity=0.205 Sum_probs=194.7
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|.+.|++++|+|++++||+|+.||.|+|||+.++. .+....+.+|.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-------------------------~~~~~~l~~h~------- 53 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHE------- 53 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-------------------------EEEEEEECCCS-------
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-------------------------CccceeccCCc-------
Confidence 3599999999999999999999999999999997542 23567889998
Q ss_pred cceeccceEEEEEEecCC--CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 109 SLEIEEKINRVRWCAAPN--GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
+.|++++| +++ +++|++++.||+|++||+.+++....
T Consensus 54 -----~~V~~l~~--s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~---------------------------------- 92 (753)
T 3jro_A 54 -----GPVWRVDW--AHPKFGTILASCSYDGKVLIWKEENGRWSQI---------------------------------- 92 (753)
T ss_dssp -----SCEEEEEE--CCTTSCSEEEEEETTSCEEEEEEETTEEEEE----------------------------------
T ss_pred -----CceEEEEe--cCCCCCCEEEEEeCCCeEEEEECCCCccccc----------------------------------
Confidence 89999999 555 89999999999999999987653222
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC--CCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcC
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM 263 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 263 (409)
..+ .+|...|.+++|+|+ ++.+++| .||.|++||++........ .+
T Consensus 93 ------------------------~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~------~~ 141 (753)
T 3jro_A 93 ------------------------AVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI------II 141 (753)
T ss_dssp ------------------------EEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE------EE
T ss_pred ------------------------ccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee------Ee
Confidence 111 578899999999999 9999999 9999999999833222111 15
Q ss_pred cCccCceEEEEEeC-------------CCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccce
Q 015290 264 DDLTEVITSAEFHP-------------IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 330 (409)
Q Consensus 264 ~~~~~~v~~~~~~p-------------~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 330 (409)
.+|...|.+++|+| ++ .+|++|+.||.|++||++++........ .+.+|...|
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~-------------~~~~h~~~V 207 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLES-------------TLEGHSDWV 207 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGG-CCEEEEETTSCEEEEEEETTTTEEEEEE-------------EECCCSSCE
T ss_pred ecCCCceEEEEecCcccccccccccCCCC-CEEEEEECCCeEEEEeccCCcccceeee-------------eecCCCCcE
Confidence 67889999999999 46 8999999999999999987642111111 234567899
Q ss_pred eeeEeccC---CCEEEEee-cCeEEEEEccCCCc----ceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 331 SDIKFAND---GQHLLSRD-YMNLKLWDIRMDST----PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 331 ~~~~~s~~---g~~l~sg~-~~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
.+++|+|+ +++|++|+ |+.|++||+..... .+.....|...+ ++++|+|+|++|++|
T Consensus 208 ~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v---------------~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 208 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL---------------WRASWSLSGNVLALS 272 (753)
T ss_dssp EEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCC---------------CCEEECTTTCCEEEE
T ss_pred EEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCce---------------EEEEEcCCCCEEEEE
Confidence 99999999 89999997 49999999986211 111122233333 699999999999999
Q ss_pred ccCCCC
Q 015290 403 SYRRDN 408 (409)
Q Consensus 403 s~dg~i 408 (409)
+.||.|
T Consensus 273 s~Dg~I 278 (753)
T 3jro_A 273 GGDNKV 278 (753)
T ss_dssp CSSSCE
T ss_pred cCCCEE
Confidence 999976
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-31 Score=256.97 Aligned_cols=285 Identities=13% Similarity=0.163 Sum_probs=194.3
Q ss_pred cCCC---cEEEEEECCC-CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeee-c---CCC
Q 015290 30 QDVD---IVSAIEFDKT-GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEF-Q---SHE 101 (409)
Q Consensus 30 ~h~~---~v~~v~~~~~-~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~h~ 101 (409)
.|.. .|++++|+|+ +++|++++.||.|++||+.+++ .+..+ . +|.
T Consensus 201 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~---------------------------~~~~~~~~~~~~~ 253 (615)
T 1pgu_A 201 THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE---------------------------FLKYIEDDQEPVQ 253 (615)
T ss_dssp SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC---------------------------EEEECCBTTBCCC
T ss_pred ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC---------------------------EeEEecccccccC
Confidence 3777 9999999999 9999999999999999998776 34555 4 777
Q ss_pred ccccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCC---CcccccccccccccCceeccC
Q 015290 102 PEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDH---FPFVSSENTLLAEKNFMNEHN 178 (409)
Q Consensus 102 ~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 178 (409)
..|.+++| + ++.+|++++.|+.|++||+.+++......... ...+.++.+.
T Consensus 254 ------------~~v~~~~~--~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 307 (615)
T 1pgu_A 254 ------------GGIFALSW--L-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT----------- 307 (615)
T ss_dssp ------------SCEEEEEE--S-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-----------
T ss_pred ------------CceEEEEE--c-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-----------
Confidence 89999999 7 99999999999999999999887766554331 1111111111
Q ss_pred CCCCceeecccccccceeEEEecCCcccceeeeee--------------------------------ccccccceeEEEe
Q 015290 179 PPSFAHGYHLEWTENMATKIANVGNSVHARCQKVY--------------------------------PHAHDFNINSISN 226 (409)
Q Consensus 179 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~v~~l~~ 226 (409)
....++.+.. ++.+++||+.. .+++..+ ..+|...|.+++|
T Consensus 308 --~~~~l~~~~~--~g~i~~~d~~~---~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~ 380 (615)
T 1pgu_A 308 --GNGRIISLSL--DGTLNFYELGH---DEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN 380 (615)
T ss_dssp --ETTEEEEEET--TSCEEEEETTE---EEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC
T ss_pred --CCCeEEEEEC--CCCEEEEECCC---CcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE
Confidence 1122222221 33444444332 1111111 0123333444444
Q ss_pred CCCCCeEEEe-cCCeEEEEEccCC--------------------------------------------------------
Q 015290 227 NSDCETFVSA-DDLRINLWNLEIS-------------------------------------------------------- 249 (409)
Q Consensus 227 ~~~~~~l~~~-~d~~i~lwd~~~~-------------------------------------------------------- 249 (409)
+++..++++ .|+.|++||+...
T Consensus 381 -~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 459 (615)
T 1pgu_A 381 -SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYV 459 (615)
T ss_dssp -CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEE
T ss_pred -CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEE
Confidence 223344444 4444444443310
Q ss_pred ------CceeeeeecCC-----CcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccC
Q 015290 250 ------DQCFNIVDMKP-----SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHG 318 (409)
Q Consensus 250 ------~~~~~~~~~~~-----~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 318 (409)
...+..++... ..+.+|...|++++|+|++ ++|++++.||.|++||+.+++.. ..+..
T Consensus 460 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~~~~~----~~~~~------ 528 (615)
T 1pgu_A 460 AVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE-TYIAAGDVMGKILLYDLQSREVK----TSRWA------ 528 (615)
T ss_dssp EEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE----ECCSC------
T ss_pred EEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCC-CEEEEcCCCCeEEEeeCCCCcce----eEeec------
Confidence 00011111110 2257789999999999999 99999999999999999887641 22211
Q ss_pred CcccccccccceeeeEecc----------CCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccce
Q 015290 319 SKSFFTEIIASISDIKFAN----------DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDK 387 (409)
Q Consensus 319 ~~~~~~~~~~~i~~~~~s~----------~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 387 (409)
.|...|++++|+| ++++|++++. +.|++||+....+++..+.+|...+
T Consensus 529 ------~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v--------------- 587 (615)
T 1pgu_A 529 ------FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGV--------------- 587 (615)
T ss_dssp ------CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCE---------------
T ss_pred ------CCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccce---------------
Confidence 1568999999999 9999999985 9999999986347888888888776
Q ss_pred eeEEEcCCCCeEEEcccCCCC
Q 015290 388 FECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 388 ~~~~~spdg~~l~s~s~dg~i 408 (409)
++++|+||++ |++++.||+|
T Consensus 588 ~~l~~s~~~~-l~s~~~d~~v 607 (615)
T 1pgu_A 588 NNLLWETPST-LVSSGADACI 607 (615)
T ss_dssp EEEEEEETTE-EEEEETTSCE
T ss_pred EEEEEcCCCC-eEEecCCceE
Confidence 6999999999 9999999976
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.2e-33 Score=287.16 Aligned_cols=282 Identities=17% Similarity=0.208 Sum_probs=224.5
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
+...|.+++|+|+++++++|+.+|.|++|++.++. ....+.+|.
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~---------------------------~~~~~~~h~--------- 1003 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR---------------------------VFSSGVGHK--------- 1003 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS---------------------------CEEECCCCS---------
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc---------------------------eeeecccCC---------
Confidence 45689999999999999999999999999998776 356678898
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
..|.+++| +|++++|++++.|+.|++||+.+++...... ... .+....+.++..+ ..++
T Consensus 1004 ---~~v~~l~~--s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~------------~v~~~~~~~~~~l-~~~~- 1062 (1249)
T 3sfz_A 1004 ---KAVRHIQF--TADGKTLISSSEDSVIQVWNWQTGDYVFLQA--HQE------------TVKDFRLLQDSRL-LSWS- 1062 (1249)
T ss_dssp ---SCCCCEEE--CSSSSCEEEECSSSBEEEEETTTTEEECCBC--CSS------------CEEEEEECSSSEE-EEEE-
T ss_pred ---CceEEEEE--CCCCCEEEEEcCCCEEEEEECCCCceEEEec--CCC------------cEEEEEEcCCCcE-EEEE-
Confidence 89999999 7999999999999999999999887654321 111 2222223333333 3333
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 269 (409)
.++.+++||+.+ +++...+ .+|...|.+++|+|++++++++ .|+.|++||+. .+..+.. +.+|...
T Consensus 1063 -~dg~v~vwd~~~---~~~~~~~-~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~-~~~~~~~-------l~~h~~~ 1129 (1249)
T 3sfz_A 1063 -FDGTVKVWNVIT---GRIERDF-TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFD-LLSPLHE-------LKGHNGC 1129 (1249)
T ss_dssp -SSSEEEEEETTT---TCCCEEE-ECCSSCCCCEEECSSSSSCEEECCSSCCCEECSS-SSSCSBC-------CCCCSSC
T ss_pred -CCCcEEEEECCC---CceeEEE-cccCCcEEEEEECCCCCEEEEEcCCCcEEEEECC-Ccceeee-------eccCCCc
Confidence 288999999976 4455555 7899999999999999999999 99999999998 5555544 6789999
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCe
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMN 349 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~ 349 (409)
|++++|+|++ ++|++++.||.|++||+.+++.. ..+.. ........+|...|++++|+|||++|++++ |.
T Consensus 1130 v~~~~~s~dg-~~lat~~~dg~i~vwd~~~~~~~----~~~~~----~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~-g~ 1199 (1249)
T 3sfz_A 1130 VRCSAFSLDG-ILLATGDDNGEIRIWNVSDGQLL----HSCAP----ISVEEGTATHGGWVTDVCFSPDSKTLVSAG-GY 1199 (1249)
T ss_dssp EEEEEECSSS-SEEEEEETTSCCCEEESSSSCCC----CCCCC----CC-------CCSCCCEEEECTTSSCEEEES-SS
T ss_pred EEEEEECCCC-CEEEEEeCCCEEEEEECCCCceE----EEecc----ccccccccccCceEEEEEECCCCCEEEECC-Ce
Confidence 9999999999 99999999999999999987642 11110 001112345678999999999999999887 99
Q ss_pred EEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 350 LKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 350 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
|++||+.+ ++.+..+..|...+ .+++|+|||++|++++.||.|
T Consensus 1200 v~vwd~~~-g~~~~~~~~~~~~i---------------~~~~~s~dg~~l~~~~~dg~v 1242 (1249)
T 3sfz_A 1200 LKWWNVAT-GDSSQTFYTNGTNL---------------KKIHVSPDFRTYVTVDNLGIL 1242 (1249)
T ss_dssp EEEBCSSS-CBCCCCCCCSSCCC---------------CCCEECSSSCCEEEECTTCCE
T ss_pred EEEEECCC-CceeeeeeccCCcc---------------cEEEECCCCCEEEEecCCcEE
Confidence 99999986 78888887777665 589999999999999999976
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2e-31 Score=246.90 Aligned_cols=274 Identities=14% Similarity=0.254 Sum_probs=208.4
Q ss_pred ccCCCc-EEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 29 LQDVDI-VSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 29 ~~h~~~-v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
.+|.+. +.++.+ ++++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 118 ~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~---------------------------~~~~~~~h~------ 162 (464)
T 3v7d_B 118 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK---------------------------FLLQLSGHD------ 162 (464)
T ss_dssp ECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE---------------------------EEEEECCCS------
T ss_pred cCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc---------------------------EEEEEeCCC------
Confidence 347766 566666 56799999999999999998776 467788999
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
+.|.+++| ++++ .|++++.|++|++||+.+++.......+ ...+.++.+. ..++..++++
T Consensus 163 ------~~V~~l~~--~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h-~~~v~~l~~~----------~~~~~~~l~s 222 (464)
T 3v7d_B 163 ------GGVWALKY--AHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGH-NSTVRCLDIV----------EYKNIKYIVT 222 (464)
T ss_dssp ------SCEEEEEE--CSTT-EEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEE----------ESSSCEEEEE
T ss_pred ------cCEEEEEE--cCCC-EEEEEeCCCCEEEEECCCCcEEEEECCC-CCccEEEEEe----------cCCCCCEEEE
Confidence 89999999 6777 9999999999999999988776554422 2222222222 1234455666
Q ss_pred ccccccceeEEEecCCcccce--------------------eeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEc
Q 015290 188 LEWTENMATKIANVGNSVHAR--------------------CQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNL 246 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~--------------------~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~ 246 (409)
++. |+.+++||+....... ....+ .+|...+.++ +++++++++| .|+.|++||+
T Consensus 223 ~s~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~ 297 (464)
T 3v7d_B 223 GSR--DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL-RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDV 297 (464)
T ss_dssp EET--TSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE-CCCSSCEEEE--EEETTEEEEEETTSCEEEEET
T ss_pred EcC--CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc-cCccceEEEE--cCCCCEEEEEeCCCeEEEEEC
Confidence 654 8999999998643221 13333 7788888877 5678999999 9999999999
Q ss_pred cCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccc
Q 015290 247 EISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI 326 (409)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (409)
+ .+..+.. +.+|...|.+++|+|++ +++++|+.||.|++||+++++. ...+ .+|
T Consensus 298 ~-~~~~~~~-------~~~~~~~v~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~----~~~~-------------~~h 351 (464)
T 3v7d_B 298 A-QMKCLYI-------LSGHTDRIYSTIYDHER-KRCISASMDTTIRIWDLENGEL----MYTL-------------QGH 351 (464)
T ss_dssp T-TTEEEEE-------ECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEE----EEEE-------------CCC
T ss_pred C-CCcEEEE-------ecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcE----EEEE-------------eCC
Confidence 8 6666666 57899999999999999 9999999999999999988753 2333 345
Q ss_pred ccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 327 IASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 327 ~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
...|.+++|+ +++|++++ |+.|++||+.+ +.....+. +...+ ..++|+|++++|++|+ |
T Consensus 352 ~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~-~~~~~~~~-~~~~~---------------~~~~~~~~~~~l~~~~-d 411 (464)
T 3v7d_B 352 TALVGLLRLS--DKFLVSAAADGSIRGWDAND-YSRKFSYH-HTNLS---------------AITTFYVSDNILVSGS-E 411 (464)
T ss_dssp SSCEEEEEEC--SSEEEEEETTSEEEEEETTT-CCEEEEEE-CTTCC---------------CEEEEEECSSEEEEEE-T
T ss_pred CCcEEEEEEc--CCEEEEEeCCCcEEEEECCC-Cceeeeec-CCCCc---------------cEEEEEeCCCEEEEec-C
Confidence 6789999998 57899887 59999999985 44444443 33322 4789999999999998 7
Q ss_pred CCC
Q 015290 406 RDN 408 (409)
Q Consensus 406 g~i 408 (409)
|.|
T Consensus 412 g~i 414 (464)
T 3v7d_B 412 NQF 414 (464)
T ss_dssp TEE
T ss_pred CeE
Confidence 754
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-31 Score=264.03 Aligned_cols=172 Identities=10% Similarity=0.113 Sum_probs=120.7
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
..|...|.+++|+| |++||+++.|++|+|||+.+++ .+..+. |.
T Consensus 55 ~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~---------------------------~~~~~~-~~------- 98 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK---------------------------VLTTVF-VP------- 98 (902)
T ss_dssp CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS---------------------------EEEEEE-CS-------
T ss_pred cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc---------------------------EEEEEc-CC-------
Confidence 34788999999999 8899999999999999998765 234443 44
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCC-Cceeec
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPS-FAHGYH 187 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 187 (409)
+.|++++| +|++++|++|+.||+|++||+.+++............. .......+.+..+.+++. ...++.
T Consensus 99 -----~~V~~v~~--sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~--~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 99 -----GKITSIDT--DASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSS--FFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp -----SCEEEEEC--CTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHH--TCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred -----CCEEEEEE--CCCCCEEEEEcCCCcEEEEECCCCccccceeccccccc--cccccCCCCeEEEEEccCCCCEEEE
Confidence 68999999 79999999999999999999998875321100000000 000011123334444443 234554
Q ss_pred ccccccceeEEEecCCcccceeeeeec-----------------cccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCC
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYP-----------------HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEIS 249 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~-----------------~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~ 249 (409)
+.. ++.+ +||++.. ++++.+. ..|...|.+++|+|+|++|++| .|+.|++||++ .
T Consensus 170 g~~--dg~v-lWd~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~-~ 242 (902)
T 2oaj_A 170 SYE--YVTL-TYSLVEN---EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN-S 242 (902)
T ss_dssp ECS--SCEE-EEETTTT---EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT-T
T ss_pred EeC--CCcE-EEECCCC---ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC-C
Confidence 443 8899 9999873 3444431 1235789999999999999999 99999999997 4
Q ss_pred Cce
Q 015290 250 DQC 252 (409)
Q Consensus 250 ~~~ 252 (409)
++.
T Consensus 243 g~~ 245 (902)
T 2oaj_A 243 GHM 245 (902)
T ss_dssp CCE
T ss_pred CcE
Confidence 443
No 77
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.5e-32 Score=249.23 Aligned_cols=258 Identities=17% Similarity=0.242 Sum_probs=197.0
Q ss_pred cccCCCcEEEEEECCC-CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 28 ELQDVDIVSAIEFDKT-GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~-~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
...|.+.|++++|+|+ +.+||+|+.||.|++|++....... ......+....+.+|.
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~-----------------~~~~~~~~~~~~~~h~----- 181 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP-----------------EPSGECQPDLRLRGHQ----- 181 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC-----------------CTTCCCCCSEEEECCS-----
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc-----------------CccccCCCcEEecCCC-----
Confidence 4558999999999997 7899999999999999998632100 0000123556778888
Q ss_pred cccceeccceEEEEEEecCCCC-EEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 107 LKSLEIEEKINRVRWCAAPNGS-MFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..|.+++| +|++. +|++++.||.|++|++..+......
T Consensus 182 -------~~v~~l~~--~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-------------------------------- 220 (430)
T 2xyi_A 182 -------KEGYGLSW--NPNLNGYLLSASDDHTICLWDINATPKEHRV-------------------------------- 220 (430)
T ss_dssp -------SCCCCEEE--CTTSTTEEEEECTTSCEEEEETTSCCBGGGE--------------------------------
T ss_pred -------CCeEEEEe--CCCCCCeEEEEeCCCeEEEEeCCCCCCCCce--------------------------------
Confidence 89999999 68887 9999999999999999874221000
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-CCCeEEEe-cCCeEEEEEccCCC--ceeeeeecCCC
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISD--QCFNIVDMKPS 261 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~--~~~~~~~~~~~ 261 (409)
......+ .+|...|.+++|+| ++..|+++ .|+.|++||++... .....
T Consensus 221 ---------------------~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~------ 272 (430)
T 2xyi_A 221 ---------------------IDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT------ 272 (430)
T ss_dssp ---------------------EECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE------
T ss_pred ---------------------eccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE------
Confidence 0111222 67899999999999 67788888 99999999999432 33333
Q ss_pred cCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC-
Q 015290 262 NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ- 340 (409)
Q Consensus 262 ~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~- 340 (409)
+..|...|++++|+|+++.+|++|+.||.|++||+++.... +.. +..|...|.+++|+|+++
T Consensus 273 -~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~---~~~-------------~~~h~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 273 -VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK---LHS-------------FESHKDEIFQVQWSPHNET 335 (430)
T ss_dssp -EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC---SEE-------------EECCSSCEEEEEECSSCTT
T ss_pred -eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCC---eEE-------------eecCCCCEEEEEECCCCCC
Confidence 46788999999999998458999999999999999874321 122 234577999999999995
Q ss_pred EEEEee-cCeEEEEEccCCC-------------cceEEEecccCcccccccccCCCCccceeeEEEcCCCC-eEEEcccC
Q 015290 341 HLLSRD-YMNLKLWDIRMDS-------------TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGSYR 405 (409)
Q Consensus 341 ~l~sg~-~~~v~iwd~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~s~s~d 405 (409)
+|++++ |+.|+|||+...+ +.+..+.+|...+ .+++|+|+++ +|++++.|
T Consensus 336 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---------------~~~~~~p~~~~~l~s~s~d 400 (430)
T 2xyi_A 336 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI---------------SDFSWNPNEPWIICSVSED 400 (430)
T ss_dssp EEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE---------------EEEEECSSSTTEEEEEETT
T ss_pred EEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCc---------------eEEEECCCCCCEEEEEECC
Confidence 577776 5999999997522 4556666676654 6999999999 89999999
Q ss_pred CCC
Q 015290 406 RDN 408 (409)
Q Consensus 406 g~i 408 (409)
|.|
T Consensus 401 g~i 403 (430)
T 2xyi_A 401 NIM 403 (430)
T ss_dssp SEE
T ss_pred CCE
Confidence 975
No 78
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.2e-31 Score=254.16 Aligned_cols=288 Identities=11% Similarity=0.113 Sum_probs=221.3
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
..|.+.|++++|+|+|++||+++ ++.|+||++.++.. ..+....+.+|.
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~-----------------------~~~~~~~~~~h~------- 63 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDS-----------------------KVPPVVQFTGHG------- 63 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCC-----------------------SSCSEEEECTTT-------
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCC-----------------------ccccceEEecCC-------
Confidence 35889999999999999999998 88999999987611 011467789998
Q ss_pred cceeccc-eEEEEEEecC--CCCEEEEEeCCCeEEEEEcCCc------eeeeeeccCCCcccccccccccccCceeccCC
Q 015290 109 SLEIEEK-INRVRWCAAP--NGSMFILSTNDKTIKLWKVRDQ------KVKKIKEMDHFPFVSSENTLLAEKNFMNEHNP 179 (409)
Q Consensus 109 ~~~~~~~-v~~l~~~~s~--~~~~l~s~~~d~~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (409)
+. |.+++| +| ++++|++++.|++|++||+.++ .......+. .....+....++
T Consensus 64 -----~~~v~~~~~--sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~s 125 (615)
T 1pgu_A 64 -----SSVVTTVKF--SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ-----------VLAGPISDISWD 125 (615)
T ss_dssp -----TSCEEEEEE--CSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE-----------CCSSCEEEEEEC
T ss_pred -----CceEEEEEE--CcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhh-----------cccccEEEEEEe
Confidence 88 999999 78 9999999999999999999755 222221111 112344555566
Q ss_pred CCCceeeccccccc--ceeEEEecCCcccceeeeeeccccccceeEEEeCCCCC-eEEEe-cCCeEEEEEccCCCceeee
Q 015290 180 PSFAHGYHLEWTEN--MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNI 255 (409)
Q Consensus 180 ~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~~~~~~~ 255 (409)
+++.+++.+....+ +.+++|+. .+.+..+ .+|...|.+++|+|+++ .++++ .|+.|++||+. ..+....
T Consensus 126 ~~~~~l~~~~~~~~~~~~v~~~d~-----~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~-~~~~~~~ 198 (615)
T 1pgu_A 126 FEGRRLCVVGEGRDNFGVFISWDS-----GNSLGEV-SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP-PFKFSAS 198 (615)
T ss_dssp TTSSEEEEEECCSSCSEEEEETTT-----CCEEEEC-CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT-TBEEEEE
T ss_pred CCCCEEEEeccCCCCccEEEEEEC-----CCcceee-ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC-Ccceeee
Confidence 67777776665322 58888883 3455555 78999999999999998 78888 99999999998 6666665
Q ss_pred eecCCCcCcCccC---ceEEEEEeCC-CCCEEEEEeCCCeEEEEeCCCccccccccccc-cccccccCCcccccccccce
Q 015290 256 VDMKPSNMDDLTE---VITSAEFHPI-YCNLLAYSSSRGFVRLVDMRQSALCDHSARIL-RDAAESHGSKSFFTEIIASI 330 (409)
Q Consensus 256 ~~~~~~~~~~~~~---~v~~~~~~p~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i 330 (409)
+.+|.. .|.+++|+|+ + ++|++++.||.|++||+++++.. ..+ .. ...|...|
T Consensus 199 -------~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~----------~~~~~~~v 256 (615)
T 1pgu_A 199 -------DRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFL----KYIEDD----------QEPVQGGI 256 (615)
T ss_dssp -------ECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEE----EECCBT----------TBCCCSCE
T ss_pred -------ecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEe----EEeccc----------ccccCCce
Confidence 567888 9999999999 8 99999999999999999887642 222 10 01456789
Q ss_pred eeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 331 SDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 331 ~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
.+++|+ ++++|++++. +.|++||+++ ++.+..+..+..... ..+.++.|+ ++.+|++++.||.|
T Consensus 257 ~~~~~~-~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~l~~~~~~g~i 321 (615)
T 1pgu_A 257 FALSWL-DSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLG-----------NQQVGVVAT-GNGRIISLSLDGTL 321 (615)
T ss_dssp EEEEES-SSSEEEEEETTSEEEEEETTT-TEEEEEEECCTTCGG-----------GCEEEEEEE-ETTEEEEEETTSCE
T ss_pred EEEEEc-CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCccc-----------CceeEEEeC-CCCeEEEEECCCCE
Confidence 999999 9999999975 9999999986 788888887742211 011477775 89999999999875
No 79
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.1e-30 Score=238.63 Aligned_cols=266 Identities=14% Similarity=0.248 Sum_probs=192.7
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
|.+.|.+++|+ +++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 158 h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~---------------------------~~~~~~~h~--------- 199 (445)
T 2ovr_B 158 HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE---------------------------CIHTLYGHT--------- 199 (445)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE---------------------------EEEEECCCS---------
T ss_pred CCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc---------------------------EEEEECCCC---------
Confidence 55555555554 3455555555555555555443 456667777
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
..|.++.| + ++.+++++.|++|++||+.+++.......+. ..+.++.+ ++..++.+..
T Consensus 200 ---~~v~~~~~--~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-~~v~~~~~--------------~~~~l~~~~~ 257 (445)
T 2ovr_B 200 ---STVRCMHL--H--EKRVVSGSRDATLRVWDIETGQCLHVLMGHV-AAVRCVQY--------------DGRRVVSGAY 257 (445)
T ss_dssp ---SCEEEEEE--E--TTEEEEEETTSEEEEEESSSCCEEEEEECCS-SCEEEEEE--------------CSSCEEEEET
T ss_pred ---CcEEEEEe--c--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCc-ccEEEEEE--------------CCCEEEEEcC
Confidence 78888888 2 4578888888889999888776655443221 11222211 2334444443
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 269 (409)
++.+++||+.+ .+++..+ .+|...|.+++| ++.+++++ .|+.|++||++ .+..+.. +.+|...
T Consensus 258 --dg~i~iwd~~~---~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~-~~~~~~~-------~~~~~~~ 321 (445)
T 2ovr_B 258 --DFMVKVWDPET---ETCLHTL-QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE-TGNCIHT-------LTGHQSL 321 (445)
T ss_dssp --TSCEEEEEGGG---TEEEEEE-CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT-TCCEEEE-------ECCCCSC
T ss_pred --CCEEEEEECCC---CcEeEEe-cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC-CCCEEEE-------EcCCccc
Confidence 88999999876 4566665 789999999999 78899999 99999999998 6666665 5778888
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-C
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M 348 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~ 348 (409)
+.++.++ + .+|++|+.||.|++||+++++. ...+.. ...|...|.+++|+ +++|++|+. |
T Consensus 322 v~~~~~~--~-~~l~~~~~dg~i~vwd~~~~~~----~~~~~~----------~~~~~~~v~~~~~~--~~~l~s~~~dg 382 (445)
T 2ovr_B 322 TSGMELK--D-NILVSGNADSTVKIWDIKTGQC----LQTLQG----------PNKHQSAVTCLQFN--KNFVITSSDDG 382 (445)
T ss_dssp EEEEEEE--T-TEEEEEETTSCEEEEETTTCCE----EEEECS----------TTSCSSCEEEEEEC--SSEEEEEETTS
T ss_pred EEEEEEe--C-CEEEEEeCCCeEEEEECCCCcE----EEEEcc----------CCCCCCCEEEEEEC--CCEEEEEeCCC
Confidence 8888875 4 7899999999999999988753 233332 12346789999996 579999874 9
Q ss_pred eEEEEEccCCCcceEEEe-----cccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 349 NLKLWDIRMDSTPVATFK-----IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 349 ~v~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
.|++||+.+ ++.+..+. ++...+ ++++|+|++.+||+|+.||+
T Consensus 383 ~v~iwd~~~-~~~~~~~~~~~~~~~~~~v---------------~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 383 TVKLWDLKT-GEFIRNLVTLESGGSGGVV---------------WRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEEETTT-CCEEEEEEECTTGGGTCEE---------------EEEEECSSEEEEEEECSSSS
T ss_pred eEEEEECCC-CceeeeeeccccCCCCceE---------------EEEEecCCEEEEEEcccCCC
Confidence 999999986 78887773 344443 79999999999999999997
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4e-31 Score=240.24 Aligned_cols=244 Identities=14% Similarity=0.147 Sum_probs=191.0
Q ss_pred cccCCCcEEEEEECC-CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 28 ELQDVDIVSAIEFDK-TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~-~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
..+|.+.|++++|+| ++++||+|+.||.|+|||+.++... ....+.+..+.+|.
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~--------------------~~~~~~~~~~~~h~----- 131 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV--------------------LPLREPVITLEGHT----- 131 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS--------------------SCBCSCSEEEECCS-----
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc--------------------cccCCceEEecCCC-----
Confidence 346999999999999 9999999999999999999876421 00112456778898
Q ss_pred cccceeccceEEEEEEecCCC-CEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 107 LKSLEIEEKINRVRWCAAPNG-SMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..|.+++| +|++ .+|++++.|+.|++||+.+++......
T Consensus 132 -------~~v~~~~~--~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------------- 171 (402)
T 2aq5_A 132 -------KRVGIVAW--HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG------------------------------- 171 (402)
T ss_dssp -------SCEEEEEE--CSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-------------------------------
T ss_pred -------CeEEEEEE--CcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-------------------------------
Confidence 89999999 6887 699999999999999998876543310
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
..+|...|.+++|+|++++|+++ .|+.|++||++ .+..+..+ ..
T Consensus 172 ----------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~------~~ 216 (402)
T 2aq5_A 172 ----------------------------PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR-KGTVVAEK------DR 216 (402)
T ss_dssp ----------------------------TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT-TTEEEEEE------EC
T ss_pred ----------------------------cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC-CCceeeee------cc
Confidence 04688899999999999999999 99999999999 56665552 15
Q ss_pred CccCc-eEEEEEeCCCCCEEEEE---eCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC
Q 015290 265 DLTEV-ITSAEFHPIYCNLLAYS---SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 340 (409)
Q Consensus 265 ~~~~~-v~~~~~~p~~~~~l~s~---s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 340 (409)
.|.+. +.++.|+|++ .+|++| +.|+.|++||+++++.. ...... .|...+.+++|+|+++
T Consensus 217 ~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~~~~~---~~~~~~------------~~~~~v~~~~~s~~~~ 280 (402)
T 2aq5_A 217 PHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKHLEEP---LSLQEL------------DTSSGVLLPFFDPDTN 280 (402)
T ss_dssp SSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTBCSSC---SEEEEC------------CCCSSCEEEEEETTTT
T ss_pred CCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCccccCC---ceEEec------------cCCCceeEEEEcCCCC
Confidence 66655 8999999999 999999 79999999999886531 111111 2246799999999999
Q ss_pred EEE-Eee-cCeEEEEEccCCCcc-eEEEeccc--CcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 341 HLL-SRD-YMNLKLWDIRMDSTP-VATFKIHE--HLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 341 ~l~-sg~-~~~v~iwd~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
+|+ +|+ |+.|++||+.. +++ +..+..+. ..+ .+++|+|++.++++++
T Consensus 281 ~l~~~g~~dg~i~i~d~~~-~~~~~~~l~~~~~~~~v---------------~~~~~sp~~~~~~s~~ 332 (402)
T 2aq5_A 281 IVYLCGKGDSSIRYFEITS-EAPFLHYLSMFSSKESQ---------------RGMGYMPKRGLEVNKC 332 (402)
T ss_dssp EEEEEETTCSCEEEEEECS-STTCEEEEEEECCSSCC---------------SEEEECCGGGSCGGGT
T ss_pred EEEEEEcCCCeEEEEEecC-CCcceEeecccccCCcc---------------cceEEecccccceecc
Confidence 986 454 59999999986 553 66666554 333 5999999999887654
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-31 Score=239.74 Aligned_cols=259 Identities=12% Similarity=0.136 Sum_probs=193.1
Q ss_pred CCCcEEEEEECCC----CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 31 DVDIVSAIEFDKT----GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 31 h~~~v~~v~~~~~----~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
|...|++++|+|+ +++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---------------------------~~~~~~~~~----- 115 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ---------------------------CIKHYVGHG----- 115 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC---------------------------EEEEEESCC-----
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce---------------------------EeeeecCCC-----
Confidence 6788999999998 6799999999999999998766 466788898
Q ss_pred cccceeccceEEEEEEecC-CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 107 LKSLEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..|.+++| +| ++.+|++++.|+.|++||+.+++........ ......+..+.+++++..+
T Consensus 116 -------~~i~~~~~--~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~l 176 (366)
T 3k26_A 116 -------NAINELKF--HPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV----------EGHRDEVLSADYDLLGEKI 176 (366)
T ss_dssp -------SCEEEEEE--CSSCTTEEEEEETTSCEEEEETTTTEEEEEECST----------TSCSSCEEEEEECTTSSEE
T ss_pred -------CcEEEEEE--CCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc----------ccccCceeEEEECCCCCEE
Confidence 89999999 67 8999999999999999999988766554210 0122334455556666677
Q ss_pred ecccccccceeEEEecCCcccceee------------------------eeeccccccceeEEEeCCCCCeEEEe-cCCe
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQ------------------------KVYPHAHDFNINSISNNSDCETFVSA-DDLR 240 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~------------------------~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~ 240 (409)
+.+.. ++.+++||+........+ ......|...|.+++|+ +++++++ .|+.
T Consensus 177 ~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~ 252 (366)
T 3k26_A 177 MSCGM--DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENA 252 (366)
T ss_dssp EEEET--TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSE
T ss_pred EEecC--CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCE
Confidence 76665 899999999863321110 01113489999999998 7799999 9999
Q ss_pred EEEEEccCCCceeeeeecC------CCcCcCccCceEEEEEeCC--CCCEEEEEeCCCeEEEEeCCCccccccccccccc
Q 015290 241 INLWNLEISDQCFNIVDMK------PSNMDDLTEVITSAEFHPI--YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRD 312 (409)
Q Consensus 241 i~lwd~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~p~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 312 (409)
|++||++........+... ...+..|...|++++|+|+ + ++|++|+.||.|++||+++++........+..
T Consensus 253 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 331 (366)
T 3k26_A 253 IVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH 331 (366)
T ss_dssp EEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTSCEEEEECCSSSGGGCEEEEECC
T ss_pred EEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCCcEEEEECCCCCCccccceEEcc
Confidence 9999998332211000000 0125678888999999999 8 99999999999999999987542211122222
Q ss_pred cccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEcc
Q 015290 313 AAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIR 356 (409)
Q Consensus 313 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~ 356 (409)
| .|...|.+++|+|++++|++++. +.|++||+.
T Consensus 332 ~-----------~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 332 H-----------KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp T-----------TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred c-----------ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 1 12578999999999999999975 999999985
No 82
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.5e-31 Score=254.51 Aligned_cols=255 Identities=17% Similarity=0.301 Sum_probs=186.8
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..+|...|.+++|+|++++|++|+.||.|+|||+.++. ....+.+|.
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~---------------------------~~~~~~~h~------ 472 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV---------------------------STRRFVGHT------ 472 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---------------------------EEEEEECCS------
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc---------------------------ceeEEeCCC------
Confidence 34699999999999999999999999999999998765 456788999
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeecc--CCCcccccccccccccCceeccCCCCC--c
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEM--DHFPFVSSENTLLAEKNFMNEHNPPSF--A 183 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 183 (409)
..|.+++| +|++++|++++.|++|++||............ .+... +..+.++++. .
T Consensus 473 ------~~v~~~~~--s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~------------v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 473 ------KDVLSVAF--SLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDW------------VSCVRFSPNTLQP 532 (694)
T ss_dssp ------SCEEEEEE--CTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSC------------EEEEEECSCSSSC
T ss_pred ------CCEEEEEE--eCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCc------------EEEEEEeCCCCcc
Confidence 89999999 79999999999999999999865543322211 11111 2222233332 3
Q ss_pred eeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCc
Q 015290 184 HGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSN 262 (409)
Q Consensus 184 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~ 262 (409)
.+++++. |+.|++||+.. .++...+ .+|...|++++|+|++++|++| .|+.|++||++ .+..+..
T Consensus 533 ~l~s~s~--d~~v~vwd~~~---~~~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~-~~~~~~~------- 598 (694)
T 3dm0_A 533 TIVSASW--DKTVKVWNLSN---CKLRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA-EGKKLYS------- 598 (694)
T ss_dssp EEEEEET--TSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT-TTEEEEC-------
T ss_pred eEEEEeC--CCeEEEEECCC---CcEEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCceEEE-------
Confidence 4555554 89999999976 3455555 7899999999999999999999 99999999998 5665544
Q ss_pred CcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccC------CcccccccccceeeeEec
Q 015290 263 MDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHG------SKSFFTEIIASISDIKFA 336 (409)
Q Consensus 263 ~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~s 336 (409)
+. +...+.+++|+|++ .+|++++ ++.|++||+++++.. ..+..+..... .......+...+++++|+
T Consensus 599 ~~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 671 (694)
T 3dm0_A 599 LE-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLESKSIV----EDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWS 671 (694)
T ss_dssp CB-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTTTEEE----EEECCCCC----------------CCCCEEEEEEC
T ss_pred ec-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCCCCCh----hhhccccccccccccccccccCCceeEEeeeEEEc
Confidence 22 34679999999998 7777665 566999999987642 22211100000 000011122347899999
Q ss_pred cCCCEEEEee-cCeEEEEEcc
Q 015290 337 NDGQHLLSRD-YMNLKLWDIR 356 (409)
Q Consensus 337 ~~g~~l~sg~-~~~v~iwd~~ 356 (409)
|+|++|++|+ ||.|+|||+.
T Consensus 672 pdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 672 ADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp TTSSEEEEEETTSEEEEEEC-
T ss_pred CCCCEEEEEcCCCeEEEEecc
Confidence 9999999997 4999999985
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.4e-30 Score=229.53 Aligned_cols=253 Identities=17% Similarity=0.268 Sum_probs=186.3
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|...|.+++|+|++++|++|+.|+.|++|+...... ......+.
T Consensus 83 ~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~---------------------------~~~~~~~~------- 128 (340)
T 4aow_A 83 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT---------------------------TRRFVGHT------- 128 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE---------------------------EEEEECCS-------
T ss_pred eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccce---------------------------eeeecCCC-------
Confidence 34899999999999999999999999999999887652 34445555
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..+..+.+ ++++.+|++++.|+.+++||+................+..+. ....+...+++++
T Consensus 129 -----~~~~~~~~--~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~----------~~~~~~~~~~~s~ 191 (340)
T 4aow_A 129 -----KDVLSVAF--SSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVR----------FSPNSSNPIIVSC 191 (340)
T ss_dssp -----SCEEEEEE--CTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEE----------ECSCSSSCEEEEE
T ss_pred -----CceeEEEE--eecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceE----------EccCCCCcEEEEE
Confidence 67888888 789999999999999999998766544332222222111111 1112223334444
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
+ .++.+++||+.. .+++..+ .+|...|++++|+|++++|++| .|+.|++||++ ....+..+ . +.
T Consensus 192 ~--~d~~i~i~d~~~---~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~-~~~~~~~~-------~-~~ 256 (340)
T 4aow_A 192 G--WDKLVKVWNLAN---CKLKTNH-IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTL-------D-GG 256 (340)
T ss_dssp E--TTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT-TTEEEEEE-------E-CS
T ss_pred c--CCCEEEEEECCC---CceeeEe-cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec-cCceeeee-------c-CC
Confidence 3 388999999976 4555555 7899999999999999999999 99999999999 66665552 2 34
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-
Q 015290 268 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD- 346 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~- 346 (409)
..+.++.|+|++ . +++++.|+.|++||++++... ..+.. ........+|...|++++|+|+|++|++|+
T Consensus 257 ~~v~~~~~~~~~-~-~~~~~~d~~i~iwd~~~~~~~----~~~~~----~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 257 DIINALCFSPNR-Y-WLCAATGPSIKIWDLEGKIIV----DELKQ----EVISTSSKAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp SCEEEEEECSSS-S-EEEEEETTEEEEEETTTTEEE----EEECC----C-------CCCCCEEEEEECTTSSEEEEEET
T ss_pred ceEEeeecCCCC-c-eeeccCCCEEEEEECCCCeEE----Eeccc----cceeeeccCCCCCEEEEEECCCCCEEEEEeC
Confidence 679999999986 5 556677999999999886531 11111 111223456788999999999999999997
Q ss_pred cCeEEEEEccC
Q 015290 347 YMNLKLWDIRM 357 (409)
Q Consensus 347 ~~~v~iwd~~~ 357 (409)
|+.|+|||+++
T Consensus 327 Dg~v~iW~~~t 337 (340)
T 4aow_A 327 DNLVRVWQVTI 337 (340)
T ss_dssp TSCEEEEEEEC
T ss_pred CCEEEEEeCCC
Confidence 49999999986
No 84
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=243.30 Aligned_cols=261 Identities=8% Similarity=-0.013 Sum_probs=197.2
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...|.+++|+|||+++|+++.|++|+ |....+ .+.+|.
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~------------------------------~l~gh~---------- 52 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK------------------------------DINCNS---------- 52 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCS------------------------------CCSSBG----------
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccc------------------------------eecCCC----------
Confidence 47899999999999999999999999 644333 347888
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
..|.+++| +|+| .++.+.+|+..... .... .....+..+.++|++..++.++.
T Consensus 53 --~~v~~V~F--sPdg-------~~~~~~~~~~~~~~---~~~~------------~~~~~V~~vawSPdG~~LAs~s~- 105 (588)
T 2j04_A 53 --KNLFHVKE--FPLE-------FENKLDFELAQQNG---LLNS------------QPVCYPRVCKPSPIDDWMAVLSN- 105 (588)
T ss_dssp --GGTEEEEE--ECCC-------CCCTTTTSCCCSSC---SSTT------------SCSCCEEEEEECSSSSCEEEEET-
T ss_pred --ccEEEEEE--CCCC-------CcceEEEEeCCCce---Eeec------------CCCCcEEEEEECCCCCEEEEEeC-
Confidence 89999999 6888 45655555543222 2111 11456778888899999998887
Q ss_pred ccceeEEEecCCcccceeeeeecccccc-----ceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCc-------eeeeeec
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDF-----NINSISNNSDCETFVSA-DDLRINLWNLEISDQ-------CFNIVDM 258 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~-------~~~~~~~ 258 (409)
+|.+++|+.+. ++..+ . |.. .+.+++|||+|++|++| .||+|++||+. .+. .+..+..
T Consensus 106 -dg~V~iwd~~~-----~l~~l-~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~-~~~l~~~~~i~l~ti~~ 176 (588)
T 2j04_A 106 -NGNVSVFKDNK-----MLTNL-D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR-KNSENTPEFYFESSIRL 176 (588)
T ss_dssp -TSCEEEEETTE-----EEEEC-C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC-CCTTTCCCCEEEEEEEC
T ss_pred -CCcEEEEeCCc-----eeeec-c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC-CCccccccceeeeeeec
Confidence 99999999643 44444 4 554 49999999999999999 99999999998 443 2333211
Q ss_pred CCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccC
Q 015290 259 KPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND 338 (409)
Q Consensus 259 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 338 (409)
. ..+|...|.+++|+|+| +++++.|+.|++||+..+... .....+. .+|...|.+++|+
T Consensus 177 ~---~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~-~~~~tL~------------~~h~~~V~svaFs-- 235 (588)
T 2j04_A 177 S---DAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQ-PVSRMIQ------------NASRRKITDLKIV-- 235 (588)
T ss_dssp S---CTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSC-CCEEEEE------------CCCSSCCCCEEEE--
T ss_pred c---cccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccc-cceeeec------------ccccCcEEEEEEE--
Confidence 1 36688999999999986 888899999999999876520 0001121 1346789999999
Q ss_pred CCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEE--cCCCCeEEEcccCCC
Q 015290 339 GQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSV--SGDGLHFATGSYRRD 407 (409)
Q Consensus 339 g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--spdg~~l~s~s~dg~ 407 (409)
|+.||+++++.|++||+.. ++......+|...+ .+++| +||+..|+++++||+
T Consensus 236 g~~LASa~~~tIkLWd~~~-~~~~~~~~gh~~~V---------------~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 236 DYKVVLTCPGYVHKIDLKN-YSISSLKTGSLENF---------------HIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp TTEEEEECSSEEEEEETTT-TEEEEEECSCCSCC---------------CEEEETTCSSCEEEEECSSCEE
T ss_pred CCEEEEEeCCeEEEEECCC-CeEEEEEcCCCceE---------------EEEEeeeCCCCCEEEEEcCCCC
Confidence 6899999889999999974 44433333788776 58999 999999999999886
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.1e-30 Score=255.38 Aligned_cols=243 Identities=18% Similarity=0.257 Sum_probs=193.5
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|...|++++|+|++++||+|+.||.|++||+.+++ .+..+.+|.
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---------------------------~~~~~~~~~-------- 97 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE---------------------------KVVDFEAHP-------- 97 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC---------------------------EEEEEECCS--------
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---------------------------EEEEEecCC--------
Confidence 489999999999999999999999999999998776 466788898
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCc-eeeeeeccCCCcccccccccccccCceeccCCC-CCceeec
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQ-KVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP-SFAHGYH 187 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 187 (409)
+.|++++| +|++++|++++.|++|++||+.++ ........ .. ..+..+.+++ ++..++.
T Consensus 98 ----~~v~~~~~--s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~------------~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 98 ----DYIRSIAV--HPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-HE------------HFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp ----SCEEEEEE--CSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-CS------------SCEEEEEEETTEEEEEEE
T ss_pred ----CCEEEEEE--eCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-CC------------CcEEEEEEEcCCCCEEEE
Confidence 89999999 799999999999999999999876 33333221 12 2233334444 4455555
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC--CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS--DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
+.. ++.|++||+.... ....+...+...+.+++|+| ++.+++++ .||.|++||++ .+..... +.
T Consensus 159 ~~~--dg~v~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~~~~-------~~ 225 (814)
T 3mkq_A 159 GCL--DRTVKVWSLGQST---PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ-TKSCVAT-------LE 225 (814)
T ss_dssp EET--TSEEEEEETTCSS---CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT-TTEEEEE-------EE
T ss_pred EeC--CCeEEEEECCCCc---ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC-CCcEEEE-------Ec
Confidence 554 8999999997633 33333245558899999999 89999999 99999999998 6666655 57
Q ss_pred CccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC--EE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ--HL 342 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~--~l 342 (409)
+|...|.+++|+|++ .+|++++.||.|++||+.+++. ...+.. |...+.+++|+|+|+ ++
T Consensus 226 ~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~----~~~~~~-------------~~~~v~~~~~~~~~~~~~~ 287 (814)
T 3mkq_A 226 GHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYKV----EKTLNV-------------GLERSWCIATHPTGRKNYI 287 (814)
T ss_dssp CCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCSE----EEEECC-------------SSSSEEEEEECTTCGGGEE
T ss_pred CCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE----EEEeec-------------CCCcEEEEEEccCCCceEE
Confidence 788999999999999 9999999999999999988653 122222 356899999999997 57
Q ss_pred EEeecCeEEEEEccC
Q 015290 343 LSRDYMNLKLWDIRM 357 (409)
Q Consensus 343 ~sg~~~~v~iwd~~~ 357 (409)
+++.++.+.+|++..
T Consensus 288 ~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 288 ASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEEETTEEEEEECSC
T ss_pred EEEeCCCEEEEEcCC
Confidence 788888899999864
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-30 Score=238.57 Aligned_cols=245 Identities=9% Similarity=-0.007 Sum_probs=178.2
Q ss_pred cceEEEEEEecCCCCEE-EEEeCCCeEEEEEcC--CceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 114 EKINRVRWCAAPNGSMF-ILSTNDKTIKLWKVR--DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l-~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
+.|.+++| +|++++| ++++.|+.|++||+. +++........ .....+..+.+++++.+++.+..
T Consensus 103 ~~v~~~~~--s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----------~~~~~v~~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 103 SYIRNLRL--TSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF-----------CFSKRPNAISIAEDDTTVIIADK 169 (450)
T ss_dssp CCEEEEEE--CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE-----------ECSSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEE--cCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc-----------cCCCCceEEEEcCCCCEEEEEeC
Confidence 68999999 7999996 888999999999998 66655443211 11123445556667777777755
Q ss_pred cccceeEEEecCCcccce-eeeeeccccccceeEEEeCCC---CCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 191 TENMATKIANVGNSVHAR-CQKVYPHAHDFNINSISNNSD---CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~---~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
++.+++|++....... +...+ .+|...|.+++|+|+ +++|++| .|+.|++||++ .+..+..+ +.+
T Consensus 170 --~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~------~~~ 239 (450)
T 2vdu_B 170 --FGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP-QCFIVDKW------LFG 239 (450)
T ss_dssp --TSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES-CTTCEEEE------CCC
T ss_pred --CCcEEEEecCCcccccccceee-ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC-CCceeeee------ecC
Confidence 8899999997754443 33344 689999999999999 9999999 99999999998 55555443 568
Q ss_pred ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcccccccccccccccc-c--------cC---Ccccccccccceeee
Q 015290 266 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAE-S--------HG---SKSFFTEIIASISDI 333 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~--------~~---~~~~~~~~~~~i~~~ 333 (409)
|...|.+++|+ ++ .+|++++.|+.|++||+++++.. ..+..+.. . +. ...........+.++
T Consensus 240 h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 313 (450)
T 2vdu_B 240 HKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKTGKNL----STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKI 313 (450)
T ss_dssp CSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTTCCEE----EEEECHHHHGGGCCTTSBC----------CBCCCEEEE
T ss_pred CCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCCCcEe----eeecchhhhhhhhhhcccccccccccccccceEEEEEE
Confidence 99999999999 88 99999999999999999987642 22221100 0 00 000001224578999
Q ss_pred EeccCCCEEEEee-c-CeEEEEEc--cCCC---cceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEccc
Q 015290 334 KFANDGQHLLSRD-Y-MNLKLWDI--RMDS---TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY 404 (409)
Q Consensus 334 ~~s~~g~~l~sg~-~-~~v~iwd~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~ 404 (409)
+|+|++++|++++ . +.|++|++ .. + +.+..+..+ ..+ .+++|+|++.++++++.
T Consensus 314 ~~~~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~~-~~v---------------~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 314 IKSKNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITFP-YNV---------------ISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp EECSSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEECS-SCE---------------EEEEEETTEEEEEECCT
T ss_pred EEeCCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEeccC-Cce---------------EEEEecCCcEEEEEecc
Confidence 9999999999886 4 99999999 43 4 566677776 332 69999997655555554
No 87
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=7.6e-32 Score=243.83 Aligned_cols=257 Identities=9% Similarity=-0.022 Sum_probs=170.5
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
..+....+++++.+||+|+.|++|+|||..+++.. ....+..+.+|.
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~----------------------~~~~~~~~~gH~----------- 136 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETII----------------------TQHVLGGKSGHH----------- 136 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEE----------------------EEEEECTTTSCS-----------
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccc----------------------eeeeecccCCCC-----------
Confidence 33444445556778999999999999999887531 223455688999
Q ss_pred ccceEEEEEEec------CCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 113 EEKINRVRWCAA------PNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 113 ~~~v~~l~~~~s------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
+.|++|+|.|. .++++|++++.|++|+|||+.++.....
T Consensus 137 -~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~---------------------------------- 181 (393)
T 4gq1_A 137 -NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA---------------------------------- 181 (393)
T ss_dssp -SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE----------------------------------
T ss_pred -CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee----------------------------------
Confidence 89999999641 2788999999999999999976643221
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCC-eEEEe-cCCeEEEEEccCCCceeeeeecC-----
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMK----- 259 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~~~~~~~~~~~----- 259 (409)
+ ..|...+.+++|+|++. +|++| .|++|++||++. ++........
T Consensus 182 --------------------------~-~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t-~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 182 --------------------------G-YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL-NLSAEENSQTELVKN 233 (393)
T ss_dssp --------------------------E-EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC-CC----------CSC
T ss_pred --------------------------e-cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCC-CcccccccccCCccc
Confidence 1 46778899999999874 78888 999999999983 3222111000
Q ss_pred -------------CCcCcCccCceEEEEEe-CCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCc-----
Q 015290 260 -------------PSNMDDLTEVITSAEFH-PIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSK----- 320 (409)
Q Consensus 260 -------------~~~~~~~~~~v~~~~~~-p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----- 320 (409)
.....+|...+.++.|+ |++ +.|++++.|+.+++||+..++.. ..+..|.......
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg-~~l~s~s~d~~i~vwd~~~~~~~----~~l~~~~~~~~~~~~~~~ 308 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDG-SGILAMCKSGAWLRWNLFANNDY----NEISDSTMKLGPKNLLPN 308 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTT-CEEEEECTTSEEEEEEC-----------------------CCSCS
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCC-CEEEEEeCCCCEEEEECccCCCC----ceEeeecCccccEEEccc
Confidence 01134677889999987 788 99999999999999999876532 2222211110000
Q ss_pred -ccccccccceeeeEecc--CCCEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCC
Q 015290 321 -SFFTEIIASISDIKFAN--DGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG 396 (409)
Q Consensus 321 -~~~~~~~~~i~~~~~s~--~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 396 (409)
.....+. ......|+| ++.++++|+ |+.|+|||+.+ ++....+.+|...+ ++++|+|||
T Consensus 309 ~~~~~~~~-~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~-~~~~~~~~~~~~~V---------------~svafspdG 371 (393)
T 4gq1_A 309 VQGISLFP-SLLGACPHPRYMDYFATAHSQHGLIQLINTYE-KDSNSIPIQLGMPI---------------VDFCWHQDG 371 (393)
T ss_dssp EEEECSSC-CSSCCEECSSCTTEEEEEETTTTEEEEEETTC-TTCCEEEEECSSCE---------------EEEEECTTS
T ss_pred cccccccC-cceeEEEccCCCCEEEEEECCCCEEEEEECCC-CcEEEEecCCCCcE---------------EEEEEcCCC
Confidence 0011112 223344444 344666776 49999999986 77777777787765 699999999
Q ss_pred CeEEEcccCCC
Q 015290 397 LHFATGSYRRD 407 (409)
Q Consensus 397 ~~l~s~s~dg~ 407 (409)
++||++++||.
T Consensus 372 ~~LA~as~~Gv 382 (393)
T 4gq1_A 372 SHLAIATEGSV 382 (393)
T ss_dssp SEEEEEESSEE
T ss_pred CEEEEEeCCCe
Confidence 99999999885
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.1e-31 Score=233.76 Aligned_cols=269 Identities=13% Similarity=0.098 Sum_probs=196.5
Q ss_pred cccCCCcEEEEEECCC---CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccc
Q 015290 28 ELQDVDIVSAIEFDKT---GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEF 104 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~---~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 104 (409)
..+|...|++++|+|+ +++|++|+.||.|++||+.+++. .+..+.+|.
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------------------~~~~~~~~~--- 111 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM--------------------------PVYSVKGHK--- 111 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS--------------------------CSEEECCCS---
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc--------------------------cEEEEEecc---
Confidence 3468999999999998 79999999999999999987652 356678898
Q ss_pred cccccceeccceEEEEEEe----cCCCCEEEEEeCCCeEEEEEcCCce-eeeeeccCCC---cccccccccccccCceec
Q 015290 105 DYLKSLEIEEKINRVRWCA----APNGSMFILSTNDKTIKLWKVRDQK-VKKIKEMDHF---PFVSSENTLLAEKNFMNE 176 (409)
Q Consensus 105 ~~~~~~~~~~~v~~l~~~~----s~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 176 (409)
..|.++.|.+ ++++++|++++.|+.|++||+.++. .......... ..+.++ .+..
T Consensus 112 ---------~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~--------~~~~ 174 (357)
T 3i2n_A 112 ---------EIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV--------AFGN 174 (357)
T ss_dssp ---------SCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE--------EEEC
T ss_pred ---------cceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE--------EEEe
Confidence 8999997753 5899999999999999999998875 3333221111 011111 1122
Q ss_pred cCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC---CCCeEEEe-cCCeEEEEEccCCCce
Q 015290 177 HNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS---DCETFVSA-DDLRINLWNLEISDQC 252 (409)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~~~-~d~~i~lwd~~~~~~~ 252 (409)
.++++..+++.+.. ++.|++||+++.. .... ..|...|.+++|+| ++++++++ .||.|++||++ .+..
T Consensus 175 ~~~~~~~~l~~~~~--d~~i~i~d~~~~~---~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~ 246 (357)
T 3i2n_A 175 AYNQEERVVCAGYD--NGDIKLFDLRNMA---LRWE--TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR-TQHP 246 (357)
T ss_dssp CCC-CCCEEEEEET--TSEEEEEETTTTE---EEEE--EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE-EEET
T ss_pred ccCCCCCEEEEEcc--CCeEEEEECccCc---eeee--cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc-CCCc
Confidence 25566677777765 8899999998743 2222 56888999999999 89999999 99999999998 4433
Q ss_pred eeeeecCCCcCcCccCceEEEEEeCCCCC-EEEEEeCCCeEEEEeCCCcccccccccccccc------ccccCCcccccc
Q 015290 253 FNIVDMKPSNMDDLTEVITSAEFHPIYCN-LLAYSSSRGFVRLVDMRQSALCDHSARILRDA------AESHGSKSFFTE 325 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 325 (409)
...+... .+.+|...|++++|+|++ . +|++++.||.|++||++.+.... ..... .........+.+
T Consensus 247 ~~~~~~~--~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~ 319 (357)
T 3i2n_A 247 TKGFASV--SEKAHKSTVWQVRHLPQN-RELFLTAGGAGGLHLWKYEYPIQRS----KKDSEGIEMGVAGSVSLLQNVTL 319 (357)
T ss_dssp TTEEEEE--EEECCSSCEEEEEEETTE-EEEEEEEETTSEEEEEEEECCSCC------CCTTSCCCCCCCEEEEEEEEEC
T ss_pred ccceeee--ccCCCcCCEEEEEECCCC-CcEEEEEeCCCcEEEeecCCCcccc----cccCCCCccccccccceeecccc
Confidence 3321100 134799999999999999 6 89999999999999998754210 00000 000011233567
Q ss_pred cccceeeeEeccCCCEEE-Eee-cCeEEEEEccC
Q 015290 326 IIASISDIKFANDGQHLL-SRD-YMNLKLWDIRM 357 (409)
Q Consensus 326 ~~~~i~~~~~s~~g~~l~-sg~-~~~v~iwd~~~ 357 (409)
|...|.+++|+|++++|+ +++ |+.|++||+.+
T Consensus 320 ~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 320 STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 888999999999999998 677 59999999974
No 89
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.7e-30 Score=238.01 Aligned_cols=290 Identities=10% Similarity=0.127 Sum_probs=184.5
Q ss_pred CcEEEEEECCCC--CEEEEEecCCeEEEEeccCCcCCCCccchh---hhhhhcccccccCCCce---------eeeee-e
Q 015290 33 DIVSAIEFDKTG--DYLAVGDRGGRVILFETVGGKNTPNQHISR---SELEKQMDFTSTSHPEY---------RYKTE-F 97 (409)
Q Consensus 33 ~~v~~v~~~~~~--~~la~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~-~ 97 (409)
+.|++++|+|++ .+|++++.||.|++||+.++.......... ..+...........|.. ..... .
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 889999999998 799999999999999997643200000000 00000000000000100 11112 3
Q ss_pred cCCCccccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCc-eeeeeeccCCCcccccccccccccCceec
Q 015290 98 QSHEPEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQ-KVKKIKEMDHFPFVSSENTLLAEKNFMNE 176 (409)
Q Consensus 98 ~~h~~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (409)
.+|. ..|.+++| +|++++|+++ .|+.|++||+... .......
T Consensus 174 ~~h~------------~~v~~~~~--~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~---------------------- 216 (447)
T 3dw8_B 174 NAHT------------YHINSISI--NSDYETYLSA-DDLRINLWHLEITDRSFNIVD---------------------- 216 (447)
T ss_dssp SCCS------------SCCCEEEE--CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEE----------------------
T ss_pred cCCC------------cceEEEEE--cCCCCEEEEe-CCCeEEEEECCCCCceeeeee----------------------
Confidence 5677 89999999 7899999998 7999999999843 2222111
Q ss_pred cCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCC-CeEEEe-cCCeEEEEEccCCCce--
Q 015290 177 HNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQC-- 252 (409)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~-~d~~i~lwd~~~~~~~-- 252 (409)
+. + .. +.+|...|.+++|+|++ ++|++| .|+.|++||++ .+..
T Consensus 217 ------------------------~~------~-~~-~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~ 263 (447)
T 3dw8_B 217 ------------------------IK------P-AN-MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR-ASALCD 263 (447)
T ss_dssp ------------------------CC------C-SS-GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT-TCSSSC
T ss_pred ------------------------cc------c-cc-ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc-CCcccc
Confidence 00 0 00 26789999999999998 999999 99999999998 4443
Q ss_pred --eeeeecCCCcCcCccC------------ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCC-cccccccccccccccccc
Q 015290 253 --FNIVDMKPSNMDDLTE------------VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQ-SALCDHSARILRDAAESH 317 (409)
Q Consensus 253 --~~~~~~~~~~~~~~~~------------~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~ 317 (409)
... +..|.. .|.+++|+|++ ++|++++. +.|++||++. ++. +..+..|....
T Consensus 264 ~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~~~~~----~~~~~~~~~~~ 330 (447)
T 3dw8_B 264 RHSKL-------FEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNMENRP----VETYQVHEYLR 330 (447)
T ss_dssp TTCEE-------ECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETTCCSSC----SCCEESCGGGT
T ss_pred ceeeE-------eccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCCCCccc----cceeecccccc
Confidence 344 344544 89999999999 99999998 9999999987 442 24444421100
Q ss_pred CCc-cccc-ccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCccccccc-----------------
Q 015290 318 GSK-SFFT-EIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCD----------------- 377 (409)
Q Consensus 318 ~~~-~~~~-~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~----------------- 377 (409)
... ..+. .....+..++|+|++++|++|+. +.|++||+.+ ++.+ .+..+.........
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT-KRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEI 408 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT-CCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC-Ccce-eeeecccccccccccCCccccccCCcccccc
Confidence 000 0000 00012345999999999999975 9999999985 5544 45544432110000
Q ss_pred -ccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 378 -LYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 378 -~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
....+....|..++|+|+|.+||+++.++.
T Consensus 409 ~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~ 439 (447)
T 3dw8_B 409 SVDSLDFNKKILHTAWHPKENIIAVATTNNL 439 (447)
T ss_dssp EGGGCCTTSCCCEEEECSSSSEEEEECSSCE
T ss_pred cccccccCCceeEEEECCCCCEEEEEeccee
Confidence 000011123468999999999999998763
No 90
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-30 Score=226.22 Aligned_cols=213 Identities=16% Similarity=0.278 Sum_probs=165.9
Q ss_pred cccCCCcEEEEEECC--CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccc
Q 015290 28 ELQDVDIVSAIEFDK--TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFD 105 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~--~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 105 (409)
..+|.+.|++++|++ ++++||+|+.||+|+|||+.+++. ..+..+.+|.
T Consensus 49 l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~-------------------------~~~~~~~~h~---- 99 (297)
T 2pm7_B 49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW-------------------------SQIAVHAVHS---- 99 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB-------------------------CCCEEECCCS----
T ss_pred EccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce-------------------------EEEEEeecCC----
Confidence 346999999999986 489999999999999999987642 1345577888
Q ss_pred ccccceeccceEEEEEEecCC--CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCc
Q 015290 106 YLKSLEIEEKINRVRWCAAPN--GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA 183 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (409)
..|.+++| +|+ +.+|++++.|++|++||+.++.....
T Consensus 100 --------~~v~~v~~--~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~------------------------------- 138 (297)
T 2pm7_B 100 --------ASVNSVQW--APHEYGPMLLVASSDGKVSVVEFKENGTTSP------------------------------- 138 (297)
T ss_dssp --------SCEEEEEE--CCGGGCSEEEEEETTSEEEEEEBCSSSCBCC-------------------------------
T ss_pred --------CceeEEEe--CcCCCCcEEEEEECCCcEEEEEecCCCceee-------------------------------
Confidence 89999999 555 88999999999999999976521100
Q ss_pred eeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC-------------CCeEEEe-cCCeEEEEEccCC
Q 015290 184 HGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD-------------CETFVSA-DDLRINLWNLEIS 249 (409)
Q Consensus 184 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-------------~~~l~~~-~d~~i~lwd~~~~ 249 (409)
.. +.+|...|.+++|+|+ +++|++| .|++|++||++..
T Consensus 139 ---------------------------~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~ 190 (297)
T 2pm7_B 139 ---------------------------II-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD 190 (297)
T ss_dssp ---------------------------EE-EECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETT
T ss_pred ---------------------------ee-eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCC
Confidence 01 1578889999999997 5789999 9999999999833
Q ss_pred Cc---eeeeeecCCCcCcCccCceEEEEEeCCC--CCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccc
Q 015290 250 DQ---CFNIVDMKPSNMDDLTEVITSAEFHPIY--CNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFT 324 (409)
Q Consensus 250 ~~---~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (409)
.. .... +.+|...|.+++|+|++ ..+|++++.|++|++||++....... ...+. ..
T Consensus 191 ~~~~~~~~~-------l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~-~~~~~-----------~~ 251 (297)
T 2pm7_B 191 AQTYVLEST-------LEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWK-KTLLK-----------EE 251 (297)
T ss_dssp TTEEEEEEE-------ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCE-EEESS-----------SS
T ss_pred CceEEEEEE-------ecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccc-eeeee-----------cc
Confidence 32 2223 67899999999999984 37999999999999999876431000 01111 02
Q ss_pred ccccceeeeEeccCCCEEEEee-cCeEEEEEccC
Q 015290 325 EIIASISDIKFANDGQHLLSRD-YMNLKLWDIRM 357 (409)
Q Consensus 325 ~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~ 357 (409)
.|...|.+++|+|+|++||+++ |+.|+||+...
T Consensus 252 ~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 252 KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 3457899999999999999987 59999999864
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.7e-30 Score=235.10 Aligned_cols=255 Identities=16% Similarity=0.221 Sum_probs=189.8
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|.+.|++|+|+|+|++||+|+.||.|+|||+.+++ .+..+.+|.
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~---------------------------~~~~~~~h~-------- 189 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK---------------------------RLRNMTSHS-------- 189 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------------------------EEEEECCCS--------
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc---------------------------EEEEEeCCC--------
Confidence 478899999999999999999999999999998776 467889999
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
..+.++.| ++..|++++.|+.+++||............ ..........+.+.+..++++.
T Consensus 190 ----~~v~~~s~----~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~------------~h~~~~~~~~~~~~g~~l~s~~ 249 (420)
T 4gga_A 190 ----ARVGSLSW----NSYILSSGSRSGHIHHHDVRVAEHHVATLS------------GHSQEVCGLRWAPDGRHLASGG 249 (420)
T ss_dssp ----SCEEEEEE----ETTEEEEEETTSEEEEEETTSSSCEEEEEE------------CCSSCEEEEEECTTSSEEEEEE
T ss_pred ----CceEEEee----CCCEEEEEeCCCceeEeeecccceeeEEec------------ccccceeeeeecCCCCeeeeee
Confidence 88999888 467999999999999999876543221111 1112333444555666666665
Q ss_pred ccccceeEEEecCCcccce-eeeeeccccccceeEEEeCCCCC-eEEE--e-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 190 WTENMATKIANVGNSVHAR-CQKVYPHAHDFNINSISNNSDCE-TFVS--A-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~-~l~~--~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
. |+.+++|+........ .+... ..|...|.+++|+|.+. .+++ | .|++|++||+. ++.....+ .
T Consensus 250 ~--D~~v~i~~~~~~~~~~~~~~~~-~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~-t~~~~~~~-------~ 318 (420)
T 4gga_A 250 N--DNLVNVWPSAPGEGGWVPLQTF-TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC-SGACLSAV-------D 318 (420)
T ss_dssp T--TSCEEEEESSCCSSCSCCSEEE-CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT-TTEEEEEE-------E
T ss_pred c--cccceEEeeccccccceeeeee-cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC-ccccceee-------c
Confidence 5 8999999998754332 33333 78999999999999765 4444 4 79999999999 66666652 2
Q ss_pred CccCceEEEEEeCCCCCEEEEEe--CCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSS--SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 342 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 342 (409)
+...+.++.|+|++ ..+++++ .|+.|++||+++++. +.. +.+|...|++++|+|||++|
T Consensus 319 -~~~~v~~~~~~~~~-~~lv~~sg~~d~~I~iwd~~~~~~----v~~-------------l~gH~~~V~~l~~spdg~~l 379 (420)
T 4gga_A 319 -AHSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMAK----VAE-------------LKGHTSRVLSLTMSPDGATV 379 (420)
T ss_dssp -CSSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCCE----EEE-------------ECCCSSCEEEEEECTTSSCE
T ss_pred -cccceeeeeecCCC-CeEEEEEecCCCEEEEEECCCCcE----EEE-------------EcCCCCCEEEEEEcCCCCEE
Confidence 34578999999999 7776654 799999999988653 233 34567899999999999999
Q ss_pred EEee-cCeEEEEEccCCCcceEEEecccC
Q 015290 343 LSRD-YMNLKLWDIRMDSTPVATFKIHEH 370 (409)
Q Consensus 343 ~sg~-~~~v~iwd~~~~~~~~~~~~~~~~ 370 (409)
++|+ |++|+|||+.. ..+....+.+..
T Consensus 380 ~S~s~D~tvriWdv~~-~~~~~~~~~~~~ 407 (420)
T 4gga_A 380 ASAAADETLRLWRCFE-LDPARRREREKA 407 (420)
T ss_dssp EEEETTTEEEEECCSC-SSCC--------
T ss_pred EEEecCCeEEEEECCC-CCccchhhhccC
Confidence 9997 59999999974 555555444433
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.98 E-value=2.1e-30 Score=234.95 Aligned_cols=274 Identities=12% Similarity=0.090 Sum_probs=195.2
Q ss_pred ccCCCcEEEEEECCC----C---CEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCC
Q 015290 29 LQDVDIVSAIEFDKT----G---DYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHE 101 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~----~---~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 101 (409)
..|...|++++|+|+ + ++|++++.||.|++|++.+++.. .......+.+|.
T Consensus 59 ~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~----------------------~~~~~~~~~~~~ 116 (397)
T 1sq9_A 59 FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET----------------------KKVIFEKLDLLD 116 (397)
T ss_dssp ECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT----------------------CCEEEEEECCSC
T ss_pred ecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccc----------------------ccccceeecccc
Confidence 348999999999999 9 99999999999999999876620 111245666772
Q ss_pred ccccccccceeccceEEEEEEec--CCCCE-EEEEeCCCeEEEEEcCC------ceeee-----eeccCCCccccccccc
Q 015290 102 PEFDYLKSLEIEEKINRVRWCAA--PNGSM-FILSTNDKTIKLWKVRD------QKVKK-----IKEMDHFPFVSSENTL 167 (409)
Q Consensus 102 ~~~~~~~~~~~~~~v~~l~~~~s--~~~~~-l~s~~~d~~i~iwd~~~------~~~~~-----~~~~~~~~~~~~~~~~ 167 (409)
... ....|.+++|.+. |++++ |++++.|+.|++||+.+ ++... ..... .....
T Consensus 117 ~~~-------~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 183 (397)
T 1sq9_A 117 SDM-------KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGT------VESPM 183 (397)
T ss_dssp TTG-------GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEE------ECCSS
T ss_pred ccc-------CCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeee------ecccc
Confidence 000 0168999999311 78999 99999999999999987 44332 11100 00000
Q ss_pred ccccCceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccc---c---ccceeEEEeCCCCCeEEEe-cC--
Q 015290 168 LAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHA---H---DFNINSISNNSDCETFVSA-DD-- 238 (409)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~---~~~v~~l~~~~~~~~l~~~-~d-- 238 (409)
.....+..+.+++++ .++.+.. ++.+++||+.. .+++..+ .. | ...|.+++|+|++++|+++ .|
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~--dg~i~i~d~~~---~~~~~~~-~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~ 256 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFN--NGTVQISELST---LRPLYNF-ESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS 256 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECT--TSEEEEEETTT---TEEEEEE-ECCC---CCCCCEEEEEECSSTTEEEEEEEETT
T ss_pred CCCCCceEEEECCCc-eEEEEeC--CCcEEEEECCC---CceeEEE-eccccccccCCccceEEECCCCCEEEEEecCCC
Confidence 112334445556666 6666654 89999999986 3555555 55 8 8999999999999999999 88
Q ss_pred -CeEEEEEccCCCceeeeeecCCCcCcC-------------ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccc
Q 015290 239 -LRINLWNLEISDQCFNIVDMKPSNMDD-------------LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCD 304 (409)
Q Consensus 239 -~~i~lwd~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~ 304 (409)
+.|++||++ .+..+.. +.. |...|.+++|+|++ ++|++++.||.|++||+++++.
T Consensus 257 ~g~i~i~d~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~-- 325 (397)
T 1sq9_A 257 FGCITLYETE-FGERIGS-------LSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKTKER-- 325 (397)
T ss_dssp EEEEEEEETT-TCCEEEE-------ECBC--------CCBSBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE--
T ss_pred CceEEEEECC-CCcccce-------eccCcccccccccccccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCce--
Confidence 999999998 5666655 344 88999999999999 9999999999999999998764
Q ss_pred ccccccc------cccccc--CCcccccccccceeeeEeccCC----------CEEEEee-cCeEEEEEccC
Q 015290 305 HSARILR------DAAESH--GSKSFFTEIIASISDIKFANDG----------QHLLSRD-YMNLKLWDIRM 357 (409)
Q Consensus 305 ~~~~~~~------~~~~~~--~~~~~~~~~~~~i~~~~~s~~g----------~~l~sg~-~~~v~iwd~~~ 357 (409)
+..+. .|.+.. ........|...|.+++|+|+| ++|++++ |+.|++||+.+
T Consensus 326 --~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 326 --ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp --EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred --eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 23333 210000 0001123347899999999998 7999987 59999999975
No 93
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.1e-31 Score=234.82 Aligned_cols=238 Identities=14% Similarity=0.109 Sum_probs=176.7
Q ss_pred EEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccce
Q 015290 37 AIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKI 116 (409)
Q Consensus 37 ~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v 116 (409)
...+.+++.+||+|+.||.|++||+.+++. +..+. . ..|
T Consensus 41 ~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~---------------------------~~~~~--~------------~~v 79 (343)
T 3lrv_A 41 NKSMYYDKWVCMCRCEDGALHFTQLKDSKT---------------------------ITTIT--T------------PNP 79 (343)
T ss_dssp CSSSSEEEEEEEEEEETTEEEEEEESSSSC---------------------------EEEEE--E------------ECC
T ss_pred hhhhcCCCCEEEEECCCCcEEEEECCCCcE---------------------------EEEEe--c------------CCc
Confidence 344556889999999999999999998763 22232 2 578
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccccccee
Q 015290 117 NRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMAT 196 (409)
Q Consensus 117 ~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 196 (409)
.++.|+ |+ +++++.|++|++|+.... +
T Consensus 80 ~~~~~~--~~---~~s~s~D~~i~~w~~~~~------------------------------------------------~ 106 (343)
T 3lrv_A 80 RTGGEH--PA---IISRGPCNRLLLLYPGNQ------------------------------------------------I 106 (343)
T ss_dssp CTTCCC--CS---EEEECSTTEEEEEETTTE------------------------------------------------E
T ss_pred eeeeeC--Cc---eEEecCCCeEEEEEccCc------------------------------------------------e
Confidence 888884 55 999999999999998653 3
Q ss_pred EEEecCCcccceeeeeeccccccceeEEEeCC--CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEE
Q 015290 197 KIANVGNSVHARCQKVYPHAHDFNINSISNNS--DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSA 273 (409)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 273 (409)
.+|+..+ .+.++.+..+|...|.+++|+| ++++++++ .|++|++||++ .+...... ...+...++++
T Consensus 107 ~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~-~~~~~~~~------~~~~~~~i~~~ 176 (343)
T 3lrv_A 107 TILDSKT---NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE-DDSQYIVH------SAKSDVEYSSG 176 (343)
T ss_dssp EEEETTT---CCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS-SSCEEEEE------CCCSSCCCCEE
T ss_pred EEeecCC---cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC-CCcEEEEE------ecCCCCceEEE
Confidence 3444443 2323333356778999999999 99999999 99999999999 56555442 23456679999
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEEE
Q 015290 274 EFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLW 353 (409)
Q Consensus 274 ~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iw 353 (409)
+|+|++ .+|++|+.||.|++||+++++... ..+.. +|..+|.+++|+|+|.+|++++++.|++|
T Consensus 177 ~~~pdg-~~lasg~~dg~i~iwd~~~~~~~~---~~~~~------------~h~~~v~~l~fs~~g~~l~s~~~~~v~iw 240 (343)
T 3lrv_A 177 VLHKDS-LLLALYSPDGILDVYNLSSPDQAS---SRFPV------------DEEAKIKEVKFADNGYWMVVECDQTVVCF 240 (343)
T ss_dssp EECTTS-CEEEEECTTSCEEEEESSCTTSCC---EECCC------------CTTSCEEEEEECTTSSEEEEEESSBEEEE
T ss_pred EECCCC-CEEEEEcCCCEEEEEECCCCCCCc---cEEec------------cCCCCEEEEEEeCCCCEEEEEeCCeEEEE
Confidence 999999 999999999999999999875310 11221 25789999999999999999988899999
Q ss_pred EccCCCcceEEEec---ccCcccccccccCCCCccceeeEEEcCCCCeEEEccc-CCCC
Q 015290 354 DIRMDSTPVATFKI---HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY-RRDN 408 (409)
Q Consensus 354 d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~-dg~i 408 (409)
|+++ ++.+..+.. |...+. . .+++|+|+|++|++++. |+.|
T Consensus 241 d~~~-~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~g~~l~~~s~~d~~i 285 (343)
T 3lrv_A 241 DLRK-DVGTLAYPTYTIPEFKTG---------T----VTYDIDDSGKNMIAYSNESNSL 285 (343)
T ss_dssp ETTS-STTCBSSCCCBC-----C---------C----EEEEECTTSSEEEEEETTTTEE
T ss_pred EcCC-CCcceeeccccccccccc---------c----eEEEECCCCCEEEEecCCCCcE
Confidence 9986 555444333 222210 0 25999999999999887 6653
No 94
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=1.7e-30 Score=232.34 Aligned_cols=204 Identities=11% Similarity=0.168 Sum_probs=157.8
Q ss_pred CCCcEEEEEECCCCCEEEEE--ecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVG--DRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~--~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
+...+.+++|+|||++||++ +.|++|+|||+.+++. +..+. |.
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~---------------------------~~~~~-~~------- 176 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE---------------------------KFEIE-TR------- 176 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE---------------------------EEEEE-CS-------
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE---------------------------EEEeC-CC-------
Confidence 55679999999999998754 4789999999987763 33443 55
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..|.+|+| +|+|++|++++.++ +++|+..++......
T Consensus 177 -----~~V~~v~f--spdg~~l~s~s~~~-~~~~~~~~~~~~~~~----------------------------------- 213 (365)
T 4h5i_A 177 -----GEVKDLHF--STDGKVVAYITGSS-LEVISTVTGSCIARK----------------------------------- 213 (365)
T ss_dssp -----SCCCEEEE--CTTSSEEEEECSSC-EEEEETTTCCEEEEE-----------------------------------
T ss_pred -----CceEEEEE--ccCCceEEecccee-EEEEEeccCcceeee-----------------------------------
Confidence 68999999 89999999998655 666666655432211
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCC----eEEEEEccCCCceeeeeecCCCcC
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDL----RINLWNLEISDQCFNIVDMKPSNM 263 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~----~i~lwd~~~~~~~~~~~~~~~~~~ 263 (409)
....|...|.+++|+|+++.++++ .|+ .+++|++. ........ ...+
T Consensus 214 ------------------------~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~-~~~~~~~~---~~~~ 265 (365)
T 4h5i_A 214 ------------------------TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK-SGNTSVLR---SKQV 265 (365)
T ss_dssp ------------------------CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE-TTEEEEEE---EEEE
T ss_pred ------------------------ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc-cceeccee---eeee
Confidence 115688889999999999999998 666 67889887 33221110 0125
Q ss_pred cCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEE
Q 015290 264 DDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 343 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 343 (409)
.+|...|++++|+|+| ++||+|+.|+.|+|||+++++.. ..+ +.+|...|++++|+|||++||
T Consensus 266 ~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~~~~~----~~~------------~~gH~~~V~~v~fSpdg~~la 328 (365)
T 4h5i_A 266 TNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKDLSMS----KIF------------KQAHSFAITEVTISPDSTYVA 328 (365)
T ss_dssp ESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEE----EEE------------TTSSSSCEEEEEECTTSCEEE
T ss_pred cCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCCCcEE----EEe------------cCcccCCEEEEEECCCCCEEE
Confidence 7788999999999999 99999999999999999987631 221 235678999999999999999
Q ss_pred Eee-cCeEEEEEccC
Q 015290 344 SRD-YMNLKLWDIRM 357 (409)
Q Consensus 344 sg~-~~~v~iwd~~~ 357 (409)
+|+ |++|+|||+..
T Consensus 329 S~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 329 SVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTSEEEEEECCT
T ss_pred EEeCCCeEEEEEcCC
Confidence 998 59999999964
No 95
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=6.4e-30 Score=232.14 Aligned_cols=246 Identities=14% Similarity=0.178 Sum_probs=189.0
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
|...|++++|+|++++||+|+.||.|++||+.+++ .+..+.+|.
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~---------------------------~~~~~~~~~--------- 176 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT---------------------------KLRTMAGHQ--------- 176 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---------------------------EEEEECCCS---------
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe---------------------------EEEEecCCC---------
Confidence 78899999999999999999999999999998776 466788898
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCc-eeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQ-KVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
..|.+++| +++.|++++.|+.|++||+... ........ ..+.+....+++++.+++.++
T Consensus 177 ---~~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~s~~ 236 (401)
T 4aez_A 177 ---ARVGCLSW----NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG-------------HSSEVCGLAWRSDGLQLASGG 236 (401)
T ss_dssp ---SCEEEEEE----ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-------------CSSCEEEEEECTTSSEEEEEE
T ss_pred ---CceEEEEE----CCCEEEEEcCCCCEEEEecccCcceeeEEcC-------------CCCCeeEEEEcCCCCEEEEEe
Confidence 89999999 3469999999999999999843 33222221 123344455566667777766
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEE-E--e-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFV-S--A-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~--~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
. |+.|++||+.. .++...+ ..|...|.+++|+|++..++ + | .|+.|++||+. .+..+..+ .
T Consensus 237 ~--d~~v~iwd~~~---~~~~~~~-~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~-~~~~~~~~--------~ 301 (401)
T 4aez_A 237 N--DNVVQIWDARS---SIPKFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA-TGARVNTV--------D 301 (401)
T ss_dssp T--TSCEEEEETTC---SSEEEEE-CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT-TCCEEEEE--------E
T ss_pred C--CCeEEEccCCC---CCccEEe-cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC-CCCEEEEE--------e
Confidence 5 89999999986 3445554 68999999999999875554 4 3 59999999999 66666653 2
Q ss_pred ccCceEEEEEeCCCCCEEEE--EeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEE
Q 015290 266 LTEVITSAEFHPIYCNLLAY--SSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 343 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 343 (409)
+...+.+++|+|++ .++++ |+.||.|++||+++++.. .... +.+|...|.+++|+|+|++|+
T Consensus 302 ~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~----~~~~-----------~~~h~~~v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 302 AGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLT----KQVD-----------IPAHDTRVLYSALSPDGRILS 365 (401)
T ss_dssp CSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEE----EEEE-----------EECCSSCCCEEEECTTSSEEE
T ss_pred CCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccce----eEEE-----------ecCCCCCEEEEEECCCCCEEE
Confidence 55789999999999 88888 458999999999875431 1111 234578899999999999999
Q ss_pred Eee-cCeEEEEEccCCCcceEE
Q 015290 344 SRD-YMNLKLWDIRMDSTPVAT 364 (409)
Q Consensus 344 sg~-~~~v~iwd~~~~~~~~~~ 364 (409)
+++ |+.|++||+.. ++.+..
T Consensus 366 s~~~dg~i~iw~~~~-~~~~~~ 386 (401)
T 4aez_A 366 TAASDENLKFWRVYD-GDHVKR 386 (401)
T ss_dssp EECTTSEEEEEECCC-------
T ss_pred EEeCCCcEEEEECCC-Cccccc
Confidence 997 59999999986 555444
No 96
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.98 E-value=6.9e-30 Score=229.45 Aligned_cols=264 Identities=11% Similarity=0.107 Sum_probs=196.0
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|...|++++|+|++++|++|+.||.|++||+.+++. .....+.+|.
T Consensus 50 ~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-------------------------~~~~~~~~~~-------- 96 (372)
T 1k8k_C 50 EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW-------------------------KPTLVILRIN-------- 96 (372)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE-------------------------EEEEECCCCS--------
T ss_pred CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee-------------------------eeeEEeecCC--------
Confidence 4899999999999999999999999999999987642 1233446677
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceee---eeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVK---KIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
..|.+++| +|++++|++++.|+.|++||+..+... ...... ....+..+.+++++.+++
T Consensus 97 ----~~v~~~~~--~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 97 ----RAARCVRW--APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKP------------IRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp ----SCEEEEEE--CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTT------------CCSCEEEEEECTTSSEEE
T ss_pred ----CceeEEEE--CCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecc------------cCCCeeEEEEcCCCCEEE
Confidence 89999999 789999999999999999999876521 111111 123344455566666676
Q ss_pred cccccccceeEEEecCCc---------------ccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCC
Q 015290 187 HLEWTENMATKIANVGNS---------------VHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISD 250 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~ 250 (409)
.+.. ++.+++||+... ...+++..+ .+|...|.+++|+|++++|+++ .|+.|++||++ .+
T Consensus 159 ~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~ 234 (372)
T 1k8k_C 159 AGSC--DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD-KK 234 (372)
T ss_dssp EEET--TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG-GT
T ss_pred EEcC--CCCEEEEEcccccccccccccccccccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC-CC
Confidence 6654 899999997521 224555555 6899999999999999999999 99999999998 66
Q ss_pred ceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCC--ccccc-cc--------------ccccccc
Q 015290 251 QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQ--SALCD-HS--------------ARILRDA 313 (409)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~--~~~~~-~~--------------~~~~~~~ 313 (409)
..+.. +..|...|.+++|+|++ .+|++| .|+.|++||++. ++... .. ...+...
T Consensus 235 ~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (372)
T 1k8k_C 235 MAVAT-------LASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNL 305 (372)
T ss_dssp TEEEE-------EECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHC
T ss_pred ceeEE-------EccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhc
Confidence 66665 56788899999999998 888877 899999999987 42100 00 0111000
Q ss_pred -ccccCC------cccccccccceeeeEec-cCC---CEEEEeec-CeEEEEEccC
Q 015290 314 -AESHGS------KSFFTEIIASISDIKFA-NDG---QHLLSRDY-MNLKLWDIRM 357 (409)
Q Consensus 314 -~~~~~~------~~~~~~~~~~i~~~~~s-~~g---~~l~sg~~-~~v~iwd~~~ 357 (409)
...... .....+|...|++++|+ ++| ++|++|++ |.|++||+++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 306 DKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp CCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred ccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 000000 22234889999999966 666 99999984 9999999975
No 97
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=6.7e-30 Score=227.84 Aligned_cols=284 Identities=13% Similarity=0.104 Sum_probs=185.5
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|.+.|++++|+|||++||+|+.+| ++||++.+... .. ..+.
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~---------------------------~~--~~~~-------- 58 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAH---------------------------IM--SQEM-------- 58 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEE---------------------------EE--EEEC--------
T ss_pred cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcce---------------------------ee--eeec--------
Confidence 4899999999999999999998775 78999876542 11 1111
Q ss_pred ceeccceEEEEEEecCCCCEE-EEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 110 LEIEEKINRVRWCAAPNGSMF-ILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..+..+++ .++++.+ ++++.|++|++||+.+++....... ...+.++. .++....+.
T Consensus 59 ----~~~~~~~~--~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~--~~~v~~v~------------~~~~~~~~~-- 116 (355)
T 3vu4_A 59 ----RHLSKVRM--LHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKV--DAPVKDLF------------LSREFIVVS-- 116 (355)
T ss_dssp ----SCCCEEEE--CTTSSEEEEECSSTTEEEEEETTTTEEEEEEEC--SSCEEEEE------------ECSSEEEEE--
T ss_pred ----CCeEEEEE--cCCCCEEEEEECCccEEEEEECCCCcEEEEEEC--CCceEEEE------------EcCCEEEEE--
Confidence 24667778 4666676 5678889999999999887665442 22222222 222221111
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEE--e-cCCeEEEEEccCCCc--------------
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS--A-DDLRINLWNLEISDQ-------------- 251 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~--~-~d~~i~lwd~~~~~~-------------- 251 (409)
.++.+++||+.+.. +.+..+ .. +...+++++ ..+++ | .||.|++||+. .+.
T Consensus 117 ---~~~~i~i~d~~~~~--~~~~~~-~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~-~~~~~~~~~~~~~~~~~ 184 (355)
T 3vu4_A 117 ---YGDVISVFKFGNPW--KRITDD-IR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQ-SSGSATTQDQGVQQKAI 184 (355)
T ss_dssp ---ETTEEEEEESSTTC--CBSSCC-EE---EEEEEEEET--TEEEEEESSCTTCEEEEECC-C----------------
T ss_pred ---EcCEEEEEECCCCc--eeeEEe-cc---CCceEEEEc--cEEEEeCCCcCcEEEEEECC-CCCcccccccccccccc
Confidence 26789999998741 222322 12 334556666 55554 7 89999999998 332
Q ss_pred -e-eeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCe-EEEEeCCCccccccccccccccccccCCccccccccc
Q 015290 252 -C-FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGF-VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 252 -~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
+ +.. +.+|...|++++|+|++ ++|++|+.|++ |++||+++++. +..+.. ..|..
T Consensus 185 ~p~~~~-------~~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iwd~~~~~~----~~~~~~-----------g~h~~ 241 (355)
T 3vu4_A 185 LGKGVL-------IKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVFKTEDGVL----VREFRR-----------GLDRA 241 (355)
T ss_dssp --CCEE-------ECCCSSCEEEEEECTTS-SEEEEEETTCSEEEEEETTTCCE----EEEEEC-----------TTCCS
T ss_pred CcccEE-------EEccCCceEEEEECCCC-CEEEEEeCCCCEEEEEECCCCcE----EEEEEc-----------CCCCC
Confidence 0 232 68899999999999999 99999999998 99999998764 233321 01567
Q ss_pred ceeeeEeccCCCEEEEeec-CeEEEEEccCCC-cceEEEec-----ccCcccccccc-cCCCCccceeeEEEcCCCCeEE
Q 015290 329 SISDIKFANDGQHLLSRDY-MNLKLWDIRMDS-TPVATFKI-----HEHLRPKLCDL-YNNDSIFDKFECSVSGDGLHFA 400 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~-~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~v~~~~~spdg~~l~ 400 (409)
.|.+++|+|+|++|+++++ +.|++||++... .....+.. +.......+.. ...........++|+|||++|+
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~ 321 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVV 321 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEE
T ss_pred cEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEE
Confidence 8999999999999999985 999999997521 11111111 00000000000 0000011114799999999999
Q ss_pred EcccCCCC
Q 015290 401 TGSYRRDN 408 (409)
Q Consensus 401 s~s~dg~i 408 (409)
+++.||.+
T Consensus 322 ~~~~dg~~ 329 (355)
T 3vu4_A 322 VWPHTRMI 329 (355)
T ss_dssp EETTTTEE
T ss_pred EEeCCCeE
Confidence 99999864
No 98
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.98 E-value=3e-30 Score=232.88 Aligned_cols=252 Identities=15% Similarity=0.123 Sum_probs=182.5
Q ss_pred cCCCcEEEEEECC-CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 30 QDVDIVSAIEFDK-TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 30 ~h~~~v~~v~~~~-~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
+|...|.+++|+| ++++|++|+.||.|++||+.+... ..+....+|.
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-------------------------~~~~~~~~~~------- 163 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI-------------------------QVFAKTDSWD------- 163 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE-------------------------EEEECCCCSS-------
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce-------------------------EEEeccCCCC-------
Confidence 5899999999999 789999999999999999986431 1222223344
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCc-eeec
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA-HGYH 187 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 187 (409)
..|.+++| +|++++|++++.|+.|++||+... ....... ....+..+.+++.+. ++++
T Consensus 164 -----~~v~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~-------------h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 164 -----YWYCCVDV--SVSRQMLATGDSTGRLLLLGLDGH-EIFKEKL-------------HKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp -----CCEEEEEE--ETTTTEEEEEETTSEEEEEETTSC-EEEEEEC-------------SSSCEEEEEECSSCTTEEEE
T ss_pred -----CCeEEEEE--CCCCCEEEEECCCCCEEEEECCCC-EEEEecc-------------CCCcEEEEEECCCCCCEEEE
Confidence 78999999 689999999999999999999543 3332221 123344455566665 6666
Q ss_pred ccccccceeEEEecCCccc-ceeeeeeccccccceeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 188 LEWTENMATKIANVGNSVH-ARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
++. |+.|++||+..... ..++..+ +|...|.+++|+| ++++|+++ .|+.|++||++ .......+........
T Consensus 223 ~~~--d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 223 SSV--DATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY-DWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EET--TSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETT-BTTSCSEEEECCBCCC
T ss_pred EeC--CCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC-CCcccccccccccccc
Confidence 655 89999999986433 3344443 6899999999999 99999999 99999999998 4444433322111122
Q ss_pred Ccc----------CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeE
Q 015290 265 DLT----------EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIK 334 (409)
Q Consensus 265 ~~~----------~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 334 (409)
.|. ..+..++|+|++ ++ +++.|+.|++||+++++. +..+..| .|...+..++
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd~~~~~~----~~~l~~~-----------~~~~~~~~~~ 359 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYDANSGGL----VHQLRDP-----------NAAGIISLNK 359 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEETTTCCE----EEEECBT-----------TBCSCCCEEE
T ss_pred ccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEecCCCce----eeeecCC-----------CCCceEEEEE
Confidence 222 334456677776 55 778999999999988764 2333331 1345677789
Q ss_pred eccCCCEEEEeecCeEEEEEccC
Q 015290 335 FANDGQHLLSRDYMNLKLWDIRM 357 (409)
Q Consensus 335 ~s~~g~~l~sg~~~~v~iwd~~~ 357 (409)
|+|++++|++|+|+.|++||+++
T Consensus 360 ~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 360 FSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp ECTTSSEEEEEETTEEEEEECC-
T ss_pred EecCccEEEEecCCcEEEEecCC
Confidence 99999999999899999999863
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=2.4e-29 Score=231.60 Aligned_cols=265 Identities=16% Similarity=0.222 Sum_probs=205.0
Q ss_pred cccCCCcE-EEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 28 ELQDVDIV-SAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 28 ~~~h~~~v-~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
..+|.+.| .++. ++|++||+|+.||.|++||+.+++ .+..+.+|.
T Consensus 114 l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~---------------------------~~~~~~~h~----- 159 (445)
T 2ovr_B 114 LKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGK---------------------------CLRTLVGHT----- 159 (445)
T ss_dssp EECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCC---------------------------EEEECCCCS-----
T ss_pred ecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCc---------------------------EEEEEcCCC-----
Confidence 34587764 5554 468999999999999999998776 467788999
Q ss_pred cccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 107 LKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
+.|.+++| + +..+++++.|++|++||+.+++.......+ ...+.++.+ + ...++
T Consensus 160 -------~~v~~~~~--~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~------------~--~~~l~ 213 (445)
T 2ovr_B 160 -------GGVWSSQM--R--DNIIISGSTDRTLKVWNAETGECIHTLYGH-TSTVRCMHL------------H--EKRVV 213 (445)
T ss_dssp -------SCEEEEEE--E--TTEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEE------------E--TTEEE
T ss_pred -------CCEEEEEe--c--CCEEEEEeCCCeEEEEECCcCcEEEEECCC-CCcEEEEEe------------c--CCEEE
Confidence 89999999 3 569999999999999999988776554422 122222222 1 23344
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
.++. |+.+++||+.+ .+++..+ .+|...|.++++ +++++++| .|+.|++||++ .+..+.. +.+
T Consensus 214 s~s~--dg~i~~wd~~~---~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~-------~~~ 277 (445)
T 2ovr_B 214 SGSR--DATLRVWDIET---GQCLHVL-MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE-TETCLHT-------LQG 277 (445)
T ss_dssp EEET--TSEEEEEESSS---CCEEEEE-ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGG-GTEEEEE-------ECC
T ss_pred EEeC--CCEEEEEECCC---CcEEEEE-cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECC-CCcEeEE-------ecC
Confidence 4443 89999999976 4455555 789999999999 67889999 99999999998 6666665 578
Q ss_pred ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 266 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
|...|.+++| ++ .++++++.||.|++||+++++. ...+. +|...+.++.++ +++|++|
T Consensus 278 ~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~----~~~~~-------------~~~~~v~~~~~~--~~~l~~~ 335 (445)
T 2ovr_B 278 HTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNC----IHTLT-------------GHQSLTSGMELK--DNILVSG 335 (445)
T ss_dssp CSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCE----EEEEC-------------CCCSCEEEEEEE--TTEEEEE
T ss_pred CCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCE----EEEEc-------------CCcccEEEEEEe--CCEEEEE
Confidence 8999999999 66 8999999999999999988753 22333 345677777764 6799998
Q ss_pred e-cCeEEEEEccCCCcceEEEec---ccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 346 D-YMNLKLWDIRMDSTPVATFKI---HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 346 ~-~~~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+ |+.|++||+++ ++++..+.+ |...+ .+++|+ +++|++|+.||.|
T Consensus 336 ~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v---------------~~~~~~--~~~l~s~~~dg~v 384 (445)
T 2ovr_B 336 NADSTVKIWDIKT-GQCLQTLQGPNKHQSAV---------------TCLQFN--KNFVITSSDDGTV 384 (445)
T ss_dssp ETTSCEEEEETTT-CCEEEEECSTTSCSSCE---------------EEEEEC--SSEEEEEETTSEE
T ss_pred eCCCeEEEEECCC-CcEEEEEccCCCCCCCE---------------EEEEEC--CCEEEEEeCCCeE
Confidence 7 59999999986 888888886 44443 588885 6799999999975
No 100
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.6e-31 Score=240.64 Aligned_cols=252 Identities=10% Similarity=0.042 Sum_probs=181.1
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 193 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (409)
++|++++| +|++++|++++.|+.|++||+.++.......+. .....+..+.+++++.++++++. |
T Consensus 12 ~~v~~~~~--s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----------~h~~~v~~~~~s~~~~~l~s~s~--d 76 (377)
T 3dwl_C 12 KPSYEHAF--NSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-----------DHDKIVTCVDWAPKSNRIVTCSQ--D 76 (377)
T ss_dssp SCCSCCEE--CSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-----------CCSSCEEEEEECTTTCCEEEEET--T
T ss_pred CcEEEEEE--CCCCCEEEEecCCCEEEEEEccCCceEEEEEEe-----------cCCceEEEEEEeCCCCEEEEEeC--C
Confidence 78999999 789999999999999999999987322221111 11233445556666677777765 8
Q ss_pred ceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCc---eeeeeecCCCcCcC-ccC
Q 015290 194 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ---CFNIVDMKPSNMDD-LTE 268 (409)
Q Consensus 194 ~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~---~~~~~~~~~~~~~~-~~~ 268 (409)
+.|++||+.......+...+ .+|...|.+++|+|++++|+++ .|+.|++||++ .+. .... +.+ |..
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~-------~~~~h~~ 147 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFE-QENDWWVSKH-------LKRPLRS 147 (377)
T ss_dssp SSEEEC------CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEE-------ECSSCCS
T ss_pred CeEEEEEcCCCCceeeeeEe-cccCCceEEEEECCCCCEEEEEecCCeEEEEEEC-CcccceeeeE-------eecccCC
Confidence 99999999875433344444 7899999999999999999999 99999999998 443 2333 345 899
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcccccccccc-ccccccccCCcccccccccceeeeEeccCCCEEEEeec
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARI-LRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
.|++++|+|++ ++|++++.|+.|++||++........... +............+ +|...|.+++|+|+|++|++++.
T Consensus 148 ~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 148 TILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp CEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET
T ss_pred CeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC
Confidence 99999999999 99999999999999999754321110000 00000000011223 77889999999999999999975
Q ss_pred -CeEEEEEccCCCcc----eEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 348 -MNLKLWDIRMDSTP----VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 348 -~~v~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
+.|++||+.+ ++. +..+.+|...+ .+++|+|+|++|++|+.|+.
T Consensus 226 d~~i~iwd~~~-~~~~~~~~~~~~~~~~~v---------------~~~~~s~~~~~l~~~~~~~~ 274 (377)
T 3dwl_C 226 DSSVTIAYPSA-PEQPPRALITVKLSQLPL---------------RSLLWANESAIVAAGYNYSP 274 (377)
T ss_dssp TTEEC-CEECS-TTSCEEECCCEECSSSCE---------------EEEEEEETTEEEEEESSSSE
T ss_pred CCcEEEEECCC-CCCcceeeEeecCCCCce---------------EEEEEcCCCCEEEEEcCCcE
Confidence 9999999986 555 67788887765 69999999999999988764
No 101
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=5.9e-30 Score=232.53 Aligned_cols=244 Identities=14% Similarity=0.156 Sum_probs=185.1
Q ss_pred EEEEEECCCCCEE-EEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceec
Q 015290 35 VSAIEFDKTGDYL-AVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIE 113 (409)
Q Consensus 35 v~~v~~~~~~~~l-a~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 113 (409)
...++++|+...+ ++++.||.|+||++..... ....+..+.+|.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~-----------------------~~~~~~~~~~h~------------ 81 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGR-----------------------VDKNVPLVCGHT------------ 81 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE-----------------------CCTTCCCBCCCS------------
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCC-----------------------CCCCCceEecCC------------
Confidence 3468888876544 4578999999999865421 001234577888
Q ss_pred cceEEEEEEecC-CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 114 EKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 114 ~~v~~l~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
+.|.+++| +| ++++|++++.|++|++||+.++......
T Consensus 82 ~~V~~~~~--~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~--------------------------------------- 120 (402)
T 2aq5_A 82 APVLDIAW--CPHNDNVIASGSEDCTVMVWEIPDGGLVLPL--------------------------------------- 120 (402)
T ss_dssp SCEEEEEE--CTTCTTEEEEEETTSEEEEEECCTTCCSSCB---------------------------------------
T ss_pred CCEEEEEe--CCCCCCEEEEEeCCCeEEEEEccCCCCcccc---------------------------------------
Confidence 89999999 68 8999999999999999999876432110
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCC-CeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
..++..+ .+|...|.+++|+|++ .+|+++ .|+.|++||++ .+.....+. ...|...|
T Consensus 121 --------------~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-----~~~~~~~v 179 (402)
T 2aq5_A 121 --------------REPVITL-EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG-TGAAVLTLG-----PDVHPDTI 179 (402)
T ss_dssp --------------CSCSEEE-ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT-TTEEEEEEC-----TTTCCSCE
T ss_pred --------------CCceEEe-cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC-CCCccEEEe-----cCCCCCce
Confidence 0222223 6899999999999998 689998 99999999999 666665520 16789999
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccc-cccccccCCccccccccc-ceeeeEeccCCCEEEEe---
Q 015290 271 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARIL-RDAAESHGSKSFFTEIIA-SISDIKFANDGQHLLSR--- 345 (409)
Q Consensus 271 ~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~i~~~~~s~~g~~l~sg--- 345 (409)
.+++|+|++ .+|++++.||.|++||+++++. ...+ .. |.. .+.+++|+|++++|++|
T Consensus 180 ~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 180 YSVDWSRDG-ALICTSCRDKRVRVIEPRKGTV----VAEKDRP-------------HEGTRPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp EEEEECTTS-SCEEEEETTSEEEEEETTTTEE----EEEEECS-------------SCSSSCCEEEECSTTEEEEEEECT
T ss_pred EEEEECCCC-CEEEEEecCCcEEEEeCCCCce----eeeeccC-------------CCCCcceEEEEcCCCcEEEEeccC
Confidence 999999999 9999999999999999998764 2233 22 233 48899999999999998
Q ss_pred e-cCeEEEEEccCCCcceEEEe-cccCcccccccccCCCCccceeeEEEcCCCCeEE-EcccCCCC
Q 015290 346 D-YMNLKLWDIRMDSTPVATFK-IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA-TGSYRRDN 408 (409)
Q Consensus 346 ~-~~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-s~s~dg~i 408 (409)
+ ++.|++||++....++.... .+...+ .+++|+|++++|+ +|+.||.|
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v---------------~~~~~s~~~~~l~~~g~~dg~i 292 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDTSSGV---------------LLPFFDPDTNIVYLCGKGDSSI 292 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCCCSSC---------------EEEEEETTTTEEEEEETTCSCE
T ss_pred CCCceEEEEcCccccCCceEEeccCCCce---------------eEEEEcCCCCEEEEEEcCCCeE
Confidence 4 59999999986444444443 233333 6899999999986 56678875
No 102
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.5e-29 Score=224.39 Aligned_cols=254 Identities=11% Similarity=0.113 Sum_probs=194.1
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|...|.+++|+|++++|++++.||.|++||+.+++. +..+. |.
T Consensus 72 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---------------------------~~~~~-~~-------- 115 (369)
T 3zwl_B 72 GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC---------------------------VATWK-SP-------- 115 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE---------------------------EEEEE-CS--------
T ss_pred hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE---------------------------EEEee-cC--------
Confidence 4899999999999999999999999999999987763 34444 55
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCC-----CeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTND-----KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
..|.+++| +|++++|++++.+ +.|++||+..+.............+..+........+..+.+++++.+
T Consensus 116 ----~~v~~~~~--~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (369)
T 3zwl_B 116 ----VPVKRVEF--SPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY 189 (369)
T ss_dssp ----SCEEEEEE--CTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE
T ss_pred ----CCeEEEEE--ccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE
Confidence 78999999 7999999999999 999999997654322211111111111111111114445555666667
Q ss_pred eecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcC
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM 263 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 263 (409)
++.+.. ++.|++||+... ...+..+ ..|...|.+++|+|++++|+++ .|+.|++||++ .+.....+
T Consensus 190 l~~~~~--dg~i~i~d~~~~--~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~------- 256 (369)
T 3zwl_B 190 IIAGHK--DGKISKYDVSNN--YEYVDSI-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS-TLQVLKKY------- 256 (369)
T ss_dssp EEEEET--TSEEEEEETTTT--TEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEE-------
T ss_pred EEEEcC--CCEEEEEECCCC--cEeEEEE-ecCCCceeEEEECCCCCEEEEecCCceEEEEECC-CCceeeee-------
Confidence 766654 899999999763 2344444 6789999999999999999999 99999999999 66666553
Q ss_pred cCccCceEEEEEeCCCCCEEEEEeCCC--------------eEEEEeCCCccccccccccccccccccCCcccccccccc
Q 015290 264 DDLTEVITSAEFHPIYCNLLAYSSSRG--------------FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIAS 329 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~l~s~s~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (409)
. +...+.+++|+|++ .++++++.++ .+++||..+++. ... +.+|...
T Consensus 257 ~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~~-------------~~~~~~~ 317 (369)
T 3zwl_B 257 E-TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE----IGR-------------VQGHFGP 317 (369)
T ss_dssp E-CSSCEEEEEECSSS-SEEEEEECCC-------------CEEEEEETTTCCE----EEE-------------EECCSSC
T ss_pred c-CCCCceeEEecCCC-ceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc----hhh-------------eecccCc
Confidence 2 66789999999999 9999999888 789999887653 122 2345788
Q ss_pred eeeeEeccCCCEEEEee-cCeEEEEEccC
Q 015290 330 ISDIKFANDGQHLLSRD-YMNLKLWDIRM 357 (409)
Q Consensus 330 i~~~~~s~~g~~l~sg~-~~~v~iwd~~~ 357 (409)
|.+++|+|++++|++++ |+.|++|++..
T Consensus 318 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 318 LNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 99999999999999997 59999999975
No 103
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.5e-31 Score=240.53 Aligned_cols=263 Identities=13% Similarity=0.094 Sum_probs=189.5
Q ss_pred CccccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccc
Q 015290 26 DEELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFD 105 (409)
Q Consensus 26 ~~~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 105 (409)
...++|.+.|.+++|||||++||+++.||.|+|||.++ ++..+. |..
T Consensus 79 ~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----------------------------~l~~l~-~~~--- 125 (588)
T 2j04_A 79 LLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----------------------------MLTNLD-SKG--- 125 (588)
T ss_dssp SSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----------------------------EEEECC-CSS---
T ss_pred EeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----------------------------eeeecc-CCC---
Confidence 44456788999999999999999999999999999543 234455 551
Q ss_pred ccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCcee-------eeeeccCCCcccccccccccccCceeccC
Q 015290 106 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKV-------KKIKEMDHFPFVSSENTLLAEKNFMNEHN 178 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (409)
++.. ..|.+++| ||||++|++|+.||+|++||+.++.. ......+.. .....+..+.+
T Consensus 126 ~~~~----~sv~svaf--SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~---------gh~~~V~sVaw 190 (588)
T 2j04_A 126 NLSS----RTYHCFEW--NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA---------GSKDWVTHIVW 190 (588)
T ss_dssp CSTT----TCEEEEEE--CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT---------TCCCCEEEEEE
T ss_pred cccc----ccEEEEEE--cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccc---------cccccEEEEEE
Confidence 0000 35999999 89999999999999999999988753 122111110 01234555566
Q ss_pred CCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeec
Q 015290 179 PPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDM 258 (409)
Q Consensus 179 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~ 258 (409)
++++ ++.++. |+.+++|++.........+.+..+|...|.+++|+ ++.++++.+++|++||+. .+.....
T Consensus 191 SPdg--Laass~--D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~-~~~~~~~--- 260 (588)
T 2j04_A 191 YEDV--LVAALS--NNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLK-NYSISSL--- 260 (588)
T ss_dssp ETTE--EEEEET--TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETT-TTEEEEE---
T ss_pred cCCc--EEEEeC--CCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECC-CCeEEEE---
Confidence 6666 444433 89999999987543222333324788999999999 688988866999999998 4444232
Q ss_pred CCCcCcCccCceEEEEE--eCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEec
Q 015290 259 KPSNMDDLTEVITSAEF--HPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA 336 (409)
Q Consensus 259 ~~~~~~~~~~~v~~~~~--~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 336 (409)
..+|...+.+++| +|++ ..+++++.||+ ++|.... ++++
T Consensus 261 ----~~gh~~~V~~va~~~s~d~-~~La~a~edG~-klw~~d~---------------------------------~~~s 301 (588)
T 2j04_A 261 ----KTGSLENFHIIPLNHEKES-TILLMSNKTSY-KVLLEDE---------------------------------LHVT 301 (588)
T ss_dssp ----ECSCCSCCCEEEETTCSSC-EEEEECSSCEE-EEEESSS---------------------------------EEEE
T ss_pred ----EcCCCceEEEEEeeeCCCC-CEEEEEcCCCC-EEEeecc---------------------------------EEEC
Confidence 2379999999999 9999 99999999999 9998641 4578
Q ss_pred cCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEccc
Q 015290 337 NDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY 404 (409)
Q Consensus 337 ~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~ 404 (409)
||+..+++. |+++++|+.. ++.+..+.+ ... |.+++|||||+.+|+++.
T Consensus 302 pd~~l~a~~-d~~v~lW~~~--g~~l~~~~~-~~~---------------I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 302 ADNIIAPYL-EKKFKKWSTI--WNEFNNYET-TLV---------------IHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp CCCSSHHHH-HHHHHHTTTT--TTSSSSSCC-EEE---------------EEEEEECTTSSEEEEEEE
T ss_pred CCceEEEEc-CCEEEEEECC--CCceeeecc-ceE---------------EEEEEECCCCCEEEEEEe
Confidence 888877775 7888889875 343333322 222 368999999988888764
No 104
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=5.6e-30 Score=224.68 Aligned_cols=212 Identities=18% Similarity=0.293 Sum_probs=163.6
Q ss_pred ccCCCcEEEEEECC--CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 29 LQDVDIVSAIEFDK--TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 29 ~~h~~~v~~v~~~~--~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
.+|.+.|++++|+| ++++||+|+.|++|+|||+.++.. +....+.+|.
T Consensus 54 ~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~-------------------------~~~~~~~~h~----- 103 (316)
T 3bg1_A 54 RGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW-------------------------EKSHEHAGHD----- 103 (316)
T ss_dssp ECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC-------------------------CEEEEECCCS-----
T ss_pred cCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc-------------------------eEEEEccCCC-----
Confidence 35999999999986 489999999999999999987542 1355678898
Q ss_pred cccceeccceEEEEEEecCC--CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 107 LKSLEIEEKINRVRWCAAPN--GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
..|.+++| +|+ +.+|++++.|++|++||+..+.....
T Consensus 104 -------~~V~~v~~--~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~-------------------------------- 142 (316)
T 3bg1_A 104 -------SSVNSVCW--APHDYGLILACGSSDGAISLLTYTGEGQWEV-------------------------------- 142 (316)
T ss_dssp -------SCCCEEEE--CCTTTCSCEEEECSSSCEEEEEECSSSCEEE--------------------------------
T ss_pred -------CceEEEEE--CCCCCCcEEEEEcCCCCEEEEecCCCCCcce--------------------------------
Confidence 89999999 455 88999999999999999976521110
Q ss_pred eecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC-----------------CCeEEEe-cCCeEEEEEc
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD-----------------CETFVSA-DDLRINLWNL 246 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----------------~~~l~~~-~d~~i~lwd~ 246 (409)
... +.+|...+.+++|+|+ +++|++| .|+.|++||+
T Consensus 143 -------------------------~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~ 196 (316)
T 3bg1_A 143 -------------------------KKI-NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKE 196 (316)
T ss_dssp -------------------------CCB-TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEE
T ss_pred -------------------------eee-eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEe
Confidence 000 1467777778888776 4689999 9999999999
Q ss_pred cCCC--ceeeeeecCCCcCcCccCceEEEEEeCCC---CCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcc
Q 015290 247 EISD--QCFNIVDMKPSNMDDLTEVITSAEFHPIY---CNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKS 321 (409)
Q Consensus 247 ~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (409)
+..+ ..... +.+|...|.+++|+|++ ..+|++++.|++|++||++...........
T Consensus 197 ~~~~~~~~~~~-------l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~------------ 257 (316)
T 3bg1_A 197 EEDGQWKEEQK-------LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKL------------ 257 (316)
T ss_dssp CTTSCEEEEEC-------CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCE------------
T ss_pred CCCCccceeee-------cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhh------------
Confidence 7322 23333 68899999999999985 268999999999999998763210000011
Q ss_pred cccccccceeeeEeccCCCEEEEee-cCeEEEEEccC
Q 015290 322 FFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRM 357 (409)
Q Consensus 322 ~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~ 357 (409)
+..|...|.+++|+|+|++||+++ |+.|+||+...
T Consensus 258 -~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 258 -LHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp -EEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred -hhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 234567899999999999999987 59999999864
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1e-28 Score=210.92 Aligned_cols=269 Identities=11% Similarity=0.091 Sum_probs=182.6
Q ss_pred cEEEEEECCCCC---EEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc----
Q 015290 34 IVSAIEFDKTGD---YLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY---- 106 (409)
Q Consensus 34 ~v~~v~~~~~~~---~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~---- 106 (409)
.+.++-|-..|- -+++++. ..|++|+..+.. +++.+.++..|+....-
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~------------------------~~~~~~~~~~~~~~v~~~~~~ 95 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAW------------------------QWEKLYTWHFAEVPVLQIVPV 95 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSS------------------------BEEEEEEEECCSSCEEEECCC
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCc------------------------cceeeEEEeccCceeEEEEEc
Confidence 466777766443 5666764 689999999874 56677777777721110
Q ss_pred ----------cccceeccceEEEEEEecCC----CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccC
Q 015290 107 ----------LKSLEIEEKINRVRWCAAPN----GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKN 172 (409)
Q Consensus 107 ----------~~~~~~~~~v~~l~~~~s~~----~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (409)
+..|+. ..|++|+| +|+ ++.+++++. .+++|++.+++.....
T Consensus 96 ~~~~~~~~~~~~~~~~-~~v~sla~--spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss------------------- 151 (356)
T 2w18_A 96 PDVYNLVCVALGNLEI-REIRALFC--SSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSS------------------- 151 (356)
T ss_dssp TTCCSCEEEEECSSSE-EEEEEECC--------CCEEEEEEEE--EEEEEEETTTEEEEEE-------------------
T ss_pred Ccccceeeeeeccccc-cceEEEEE--CCCccccccEEEeCCC--eEEEEecCCCcEEEec-------------------
Confidence 111121 47888888 788 888888874 4888998776554331
Q ss_pred ceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC---CCCeEEEe-cCCeEEEEEccC
Q 015290 173 FMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS---DCETFVSA-DDLRINLWNLEI 248 (409)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~~~-~d~~i~lwd~~~ 248 (409)
....++.|++|++... ++.+... .+|...++.++|++ +++.|++| .|++|+|||+.
T Consensus 152 ----------------~~g~d~~V~~~~~s~d--G~~~~s~-~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~- 211 (356)
T 2w18_A 152 ----------------GTLSDQQVEVMTFAED--GGGKENQ-FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK- 211 (356)
T ss_dssp ----------------SSSTTCEEEEEEECTT--SCEEEEE-EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT-
T ss_pred ----------------ccCCCCcEEEEEECCC--Cceeeee-ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC-
Confidence 1112778999999432 3444444 67888999999999 77999999 99999999999
Q ss_pred CCceeeeeecCCCcCcCc---cCceEEEEEeCCCCCEE------------EEEeCCCeEEEEeCCCcccccccccccccc
Q 015290 249 SDQCFNIVDMKPSNMDDL---TEVITSAEFHPIYCNLL------------AYSSSRGFVRLVDMRQSALCDHSARILRDA 313 (409)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~---~~~v~~~~~~p~~~~~l------------~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 313 (409)
+++++.++ .+| ...+.+++|+|+| .++ ++|+.|++|++||..+++.. ..+..
T Consensus 212 TGk~l~tL-------~g~~~~v~~v~~vafSpdG-~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l----~v~~~- 278 (356)
T 2w18_A 212 TGQLLKKM-------HIDDSYQASVCHKAYSEMG-LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSV----GVMLY- 278 (356)
T ss_dssp TCCEEEEE-------ECCC---CCCEEEEEEETT-EEEEEEC------------CCEEEEEEETTTTEEE----EEEEE-
T ss_pred CCcEEEEE-------cCCCcceeeeEEEEECCCC-CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEE----EEEEe-
Confidence 78888774 333 3467888999999 765 66888999999999887642 22110
Q ss_pred ccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEE
Q 015290 314 AESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSV 392 (409)
Q Consensus 314 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 392 (409)
. .-.+|...+.+..++ +.++|+|+ |++|+|||+.+ ++++.++.+|...+. ..++|
T Consensus 279 ~-------~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vv--------------s~vaf 334 (356)
T 2w18_A 279 C-------LPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHW--------------SFVKW 334 (356)
T ss_dssp C-------CCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTT-CSEEEEECCC--CCC--------------CEEEE
T ss_pred e-------ccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeE--------------EEEEE
Confidence 0 001233334333443 78899997 59999999987 899999998877541 25899
Q ss_pred cCCCCeEEEcccCCCC
Q 015290 393 SGDGLHFATGSYRRDN 408 (409)
Q Consensus 393 spdg~~l~s~s~dg~i 408 (409)
||||++|++|+.|++|
T Consensus 335 SPDG~~LaSGS~D~TI 350 (356)
T 2w18_A 335 SGTDSHLLAGQKDGNI 350 (356)
T ss_dssp CSSSSEEEEECTTSCE
T ss_pred CCCCCEEEEEECCCcE
Confidence 9999999999999986
No 106
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-30 Score=235.28 Aligned_cols=281 Identities=13% Similarity=0.153 Sum_probs=201.2
Q ss_pred EECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeee-cCCCccccccccceeccceE
Q 015290 39 EFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEF-QSHEPEFDYLKSLEIEEKIN 117 (409)
Q Consensus 39 ~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~v~ 117 (409)
.|+|+++.+++++ .|+.... .+..+ .+|. +.|+
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g~----------------------------~~~~~~~~h~------------~~V~ 67 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRGK----------------------------LIATLMENEP------------NSIT 67 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCCC----------------------------EEEEECTTTT------------SCEE
T ss_pred hcCCccccccccc------cccccce----------------------------EEeeeccCCC------------CceE
Confidence 4788888888765 3764332 46667 8898 8999
Q ss_pred EEEEEecC-CCCEEEEEeCCCeEEEEEcCC---ceee-eeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 118 RVRWCAAP-NGSMFILSTNDKTIKLWKVRD---QKVK-KIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 118 ~l~~~~s~-~~~~l~s~~~d~~i~iwd~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
+++| +| ++++|++|+.|++|++||+.+ +... ....+. ....+..+.++++...+++++.
T Consensus 68 ~~~~--s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~~l~s~s~-- 131 (437)
T 3gre_A 68 SSAV--SPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD------------CSSTVTQITMIPNFDAFAVSSK-- 131 (437)
T ss_dssp EEEE--ECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE------------CSSCEEEEEECTTSSEEEEEET--
T ss_pred EEEE--CCCCCCEEEEecCCceEEEeECcccccCcccceeeecc------------CCCCEEEEEEeCCCCEEEEEeC--
Confidence 9999 68 999999999999999999876 3211 111111 1233445555566667776665
Q ss_pred cceeEEEecCCcccceeeeee---------ccc--cccceeEEE--eCCCCCeEEEe-cCCeEEEEEccCCCceeeeeec
Q 015290 193 NMATKIANVGNSVHARCQKVY---------PHA--HDFNINSIS--NNSDCETFVSA-DDLRINLWNLEISDQCFNIVDM 258 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~---------~~~--~~~~v~~l~--~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~ 258 (409)
|+.|++||++....++....+ +.. +...+.++. +++++.+|++| .|+.|++||++ .+..+..
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~--- 207 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR-TLERLQI--- 207 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT-TCCEEEE---
T ss_pred CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCeeeEE---
Confidence 899999999633222222221 011 455666666 56889999999 99999999998 6666665
Q ss_pred CCCcCcC--ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeee---
Q 015290 259 KPSNMDD--LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDI--- 333 (409)
Q Consensus 259 ~~~~~~~--~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--- 333 (409)
+.+ |...|++++|+|++ ++|++|+.||.|++||+++++. ...+.. .|...|.++
T Consensus 208 ----~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~----~~~~~~------------~~~~~v~~~~~~ 266 (437)
T 3gre_A 208 ----IENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVL----IRSWSF------------GDHAPITHVEVC 266 (437)
T ss_dssp ----EECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEE----EEEEBC------------TTCEEEEEEEEC
T ss_pred ----EccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccE----EEEEec------------CCCCceEEEEec
Confidence 344 88999999999999 9999999999999999998653 232221 234689999
Q ss_pred -EeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCccccccc-----------ccCCCCccceeeEEEcCCCCeEE
Q 015290 334 -KFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCD-----------LYNNDSIFDKFECSVSGDGLHFA 400 (409)
Q Consensus 334 -~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~spdg~~l~ 400 (409)
.|+|++++|++|+. +.|++||+++ ++++..+.+|...+....- +........|++++|+ ++++|+
T Consensus 267 ~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 267 QFYGKNSVIVVGGSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp TTTCTTEEEEEEESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred cccCCCccEEEEEcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 45567889999975 9999999986 8889999988765432110 0001122336799999 889999
Q ss_pred EcccCCCC
Q 015290 401 TGSYRRDN 408 (409)
Q Consensus 401 s~s~dg~i 408 (409)
+|+.||.|
T Consensus 345 s~~~d~~i 352 (437)
T 3gre_A 345 TDEATSSI 352 (437)
T ss_dssp EEGGGTEE
T ss_pred ecCCCCeE
Confidence 99999976
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-28 Score=216.31 Aligned_cols=244 Identities=12% Similarity=0.165 Sum_probs=184.4
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|...|.+++|+|++++|++|+.||.|++|++..... .+.+..+.+|.
T Consensus 57 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~------------------------~~~~~~~~~~~-------- 104 (313)
T 3odt_A 57 TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG------------------------EDPLYTLIGHQ-------- 104 (313)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT------------------------SCC-CEECCCS--------
T ss_pred cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC------------------------CCcccchhhcc--------
Confidence 4789999999999999999999999999999886542 12456678888
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCC-CCceeecc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP-SFAHGYHL 188 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 188 (409)
..|.++.| ++.+|++++.|+.|++|| .++.......+ .. .+....+.+ ....++.+
T Consensus 105 ----~~i~~~~~----~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~-~~------------~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 105 ----GNVCSLSF----QDGVVISGSWDKTAKVWK--EGSLVYNLQAH-NA------------SVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp ----SCEEEEEE----ETTEEEEEETTSEEEEEE--TTEEEEEEECC-SS------------CEEEEEEEETTTTEEEEE
T ss_pred ----cCEEEEEe----cCCEEEEEeCCCCEEEEc--CCcEEEecccC-CC------------ceeEEEEccCCCCEEEEE
Confidence 89999999 356999999999999999 33333332221 11 122222222 33445544
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
.. ++.+++||. .+....+...|...+.+++|+|++. ++++ .|+.|++||++ .++.+.. +.+|.
T Consensus 162 ~~--d~~i~i~d~-----~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~-~~~~~~~-------~~~~~ 225 (313)
T 3odt_A 162 SA--DKTIKLWQN-----DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMH-TGDVLRT-------YEGHE 225 (313)
T ss_dssp ET--TSCEEEEET-----TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETT-TCCEEEE-------EECCS
T ss_pred EC--CCCEEEEec-----CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECC-chhhhhh-------hhcCC
Confidence 43 889999994 3455555344899999999999998 7787 99999999998 6666665 57789
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec
Q 015290 268 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
..|++++|+|++ . |++++.||.|++||+++++. ...+.. |...|.+++|+|++++++++.|
T Consensus 226 ~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~~~----~~~~~~-------------~~~~i~~~~~~~~~~~~~~~~d 286 (313)
T 3odt_A 226 SFVYCIKLLPNG-D-IVSCGEDRTVRIWSKENGSL----KQVITL-------------PAISIWSVDCMSNGDIIVGSSD 286 (313)
T ss_dssp SCEEEEEECTTS-C-EEEEETTSEEEEECTTTCCE----EEEEEC-------------SSSCEEEEEECTTSCEEEEETT
T ss_pred ceEEEEEEecCC-C-EEEEecCCEEEEEECCCCce----eEEEec-------------cCceEEEEEEccCCCEEEEeCC
Confidence 999999999998 4 88999999999999988754 233333 3568999999999996665567
Q ss_pred CeEEEEEccCCCcceEE
Q 015290 348 MNLKLWDIRMDSTPVAT 364 (409)
Q Consensus 348 ~~v~iwd~~~~~~~~~~ 364 (409)
+.|++||++. ++....
T Consensus 287 g~i~iw~~~~-~~~~~~ 302 (313)
T 3odt_A 287 NLVRIFSQEK-SRWASE 302 (313)
T ss_dssp SCEEEEESCG-GGCCC-
T ss_pred CcEEEEeCCC-Cceeeh
Confidence 9999999985 554433
No 108
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=3.1e-29 Score=230.05 Aligned_cols=239 Identities=13% Similarity=0.131 Sum_probs=172.4
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeecc-CCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEM-DHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
..|++|+|+| .++.+|++|+.||+|+|||+.+++....... .+...|.++.|.+. +..++++++.
T Consensus 120 ~~V~~l~~~P-~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-----------~~~~l~s~s~-- 185 (435)
T 4e54_B 120 RRATSLAWHP-THPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-----------NTNQFYASSM-- 185 (435)
T ss_dssp SCEEEEEECS-SCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS-----------CTTEEEEECS--
T ss_pred CCEEEEEEeC-CCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC-----------CCCEEEEEeC--
Confidence 7899999953 2567999999999999999987765544432 23333444444322 3345555554
Q ss_pred cceeEEEecCCcccceeeeeec--cccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc
Q 015290 193 NMATKIANVGNSVHARCQKVYP--HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 269 (409)
|++|++||+++. ....+. ..+...+.+++|+|++++|++| .||.|++||++ +..+.. +.+|...
T Consensus 186 D~~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~--~~~~~~-------~~~h~~~ 252 (435)
T 4e54_B 186 EGTTRLQDFKGN----ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD--GKELWN-------LRMHKKK 252 (435)
T ss_dssp SSCEEEEETTSC----EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS--SCBCCC-------SBCCSSC
T ss_pred CCEEEEeeccCC----ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC--cceeEE-------Eecccce
Confidence 899999999752 222221 2344567899999999999999 99999999997 333333 6889999
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cC
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YM 348 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~ 348 (409)
|++++|+|+++.+|++|+.|+.|++||+++.+.. ..+. ...+|...|++++|+|+|++|++++ |+
T Consensus 253 v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~----~~~~----------~~~~h~~~v~~~~~spdg~~l~s~~~D~ 318 (435)
T 4e54_B 253 VTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK----ASFL----------YSLPHRHPVNAACFSPDGARLLTTDQKS 318 (435)
T ss_dssp EEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS----SCCS----------BCCBCSSCEEECCBCTTSSEEEEEESSS
T ss_pred EEeeeecCCCceEEEEecCcceeeEEeccccccc----ceEE----------EeeeccccccceeECCCCCeeEEEcCCC
Confidence 9999999998668999999999999999886531 1111 1245678999999999999999997 59
Q ss_pred eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 349 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 349 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
.|+|||+.. +.....+..|....... ..+..+.|+|++.++++++
T Consensus 319 ~i~iwd~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 363 (435)
T 4e54_B 319 EIRVYSASQ-WDCPLGLIPHPHRHFQH---------LTPIKAAWHPRYNLIVVGR 363 (435)
T ss_dssp CEEEEESSS-SSSEEEECCCCCCCCSS---------SCCCBCEECSSSSCEEEEC
T ss_pred EEEEEECCC-CccceEEeccccccccc---------ceeEEEEEcCCCCEEEEEE
Confidence 999999986 77777777665432110 0113567777777666554
No 109
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=3.2e-28 Score=213.69 Aligned_cols=244 Identities=17% Similarity=0.209 Sum_probs=184.7
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|...|++++|+|++++||+|+.||+|++|++.+++ .+..+.+|.
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~---------------------------~~~~~~~h~-------- 109 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK---------------------------RLRNMTSHS-------- 109 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---------------------------EEEEEECCS--------
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce---------------------------eEEEecCcc--------
Confidence 588899999999999999999999999999999876 467788998
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
..+.++.+ ++..+++++.++.+++|+............. ...........+.+..++++.
T Consensus 110 ----~~~~~~~~----~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~s~~ 169 (318)
T 4ggc_A 110 ----ARVGSLSW----NSYILSSGSRSGHIHHHDVRVAEHHVATLSG------------HSQEVCGLRWAPDGRHLASGG 169 (318)
T ss_dssp ----SCEEEEEE----ETTEEEEEETTSEEEEEETTSSSCEEEEEEC------------CSSCEEEEEECTTSSEEEEEE
T ss_pred ----ceEEEeec----CCCEEEEEecCCceEeeecCCCceeEEEEcC------------ccCceEEEEEcCCCCEEEEEe
Confidence 77777665 4679999999999999998766433221111 112233334445556666655
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEE---Ee-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFV---SA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~---~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
. |+.|++||+.+.............+.+.|.+++++|++..++ ++ .++.|++||.+ ....... ..
T Consensus 170 ~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~-~~~~~~~--------~~ 238 (318)
T 4ggc_A 170 N--DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC-SGACLSA--------VD 238 (318)
T ss_dssp T--TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT-TCCEEEE--------EE
T ss_pred c--CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc-ccccccc--------cc
Confidence 4 899999999875543333333367888999999999875443 46 78999999998 4444433 34
Q ss_pred ccCceEEEEEeCCCCCEEEEE--eCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEE
Q 015290 266 LTEVITSAEFHPIYCNLLAYS--SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 343 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 343 (409)
+...+..+.|+|++ ..++++ +.|+.|++||+++++. +..+ .+|...|++++|+|+|++|+
T Consensus 239 ~~~~v~~~~~~~~~-~~~~~~sg~~d~~i~iwd~~~~~~----~~~l-------------~gH~~~V~~l~~spdg~~l~ 300 (318)
T 4ggc_A 239 AHSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMAK----VAEL-------------KGHTSRVLSLTMSPDGATVA 300 (318)
T ss_dssp CSSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCCE----EEEE-------------CCCSSCEEEEEECTTSSCEE
T ss_pred ceeeeeeeeecccc-cceEEEEEcCCCEEEEEECCCCcE----EEEE-------------cCCCCCEEEEEEcCCCCEEE
Confidence 66779999999999 766654 4799999999998764 2333 45678999999999999999
Q ss_pred Eee-cCeEEEEEccC
Q 015290 344 SRD-YMNLKLWDIRM 357 (409)
Q Consensus 344 sg~-~~~v~iwd~~~ 357 (409)
+|+ |++|+|||+..
T Consensus 301 S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 301 SAAADETLRLWRCFE 315 (318)
T ss_dssp EEETTTEEEEECCSC
T ss_pred EEecCCeEEEEECCC
Confidence 997 59999999863
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=218.65 Aligned_cols=237 Identities=11% Similarity=0.031 Sum_probs=166.5
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeee-ecCCCccccccccce
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTE-FQSHEPEFDYLKSLE 111 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~~~~~~~~~ 111 (409)
..|.++.|+|+ +++|+.|++|++|+....... ..+ ...+.+.. ..+|.
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~-------~~~-----------~~~~~~~~~~~~~~---------- 125 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITI-------LDS-----------KTNKVLREIEVDSA---------- 125 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEE-------EET-----------TTCCEEEEEECCCS----------
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEE-------eec-----------CCcceeEEeecCCC----------
Confidence 55677778887 999999999999987643200 000 00011222 23555
Q ss_pred eccceEEEEEEecC--CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 112 IEEKINRVRWCAAP--NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 112 ~~~~v~~l~~~~s~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
+.|.+++| +| ++++|++++.|++|++||+.+++......
T Consensus 126 --~~v~~~~~--~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~----------------------------------- 166 (343)
T 3lrv_A 126 --NEIIYMYG--HNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS----------------------------------- 166 (343)
T ss_dssp --SCEEEEEC--CC---CCEEEEEETTCCEEEEESSSSCEEEEEC-----------------------------------
T ss_pred --CCEEEEEc--CCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-----------------------------------
Confidence 78999999 67 99999999999999999998876533211
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCcee-eeeecCCCcCcC-c
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCF-NIVDMKPSNMDD-L 266 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~-~~~~~~~~~~~~-~ 266 (409)
..+...+.+++|+|++.+|++| .||.|++||++ .+... .. +.. |
T Consensus 167 -------------------------~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~-~~~~~~~~-------~~~~h 213 (343)
T 3lrv_A 167 -------------------------AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS-SPDQASSR-------FPVDE 213 (343)
T ss_dssp -------------------------CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS-CTTSCCEE-------CCCCT
T ss_pred -------------------------cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC-CCCCCccE-------EeccC
Confidence 3455679999999999999999 99999999999 55544 44 455 9
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccce--eeeEeccCCCEEEE
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI--SDIKFANDGQHLLS 344 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~s~~g~~l~s 344 (409)
...|++++|+|++ .+|++++ ++.|++||+++++.. ..+.. +..|...+ .+++|+|+|++|++
T Consensus 214 ~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~~~~~----~~~~~----------~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 214 EAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRKDVGT----LAYPT----------YTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp TSCEEEEEECTTS-SEEEEEE-SSBEEEEETTSSTTC----BSSCC----------CBC-----CCEEEEECTTSSEEEE
T ss_pred CCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCCCCcc----eeecc----------cccccccccceEEEECCCCCEEEE
Confidence 9999999999999 9999999 559999999987531 22221 11122333 46999999999999
Q ss_pred ee--cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcC---CCCeEEEcccCCCC
Q 015290 345 RD--YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG---DGLHFATGSYRRDN 408 (409)
Q Consensus 345 g~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp---dg~~l~s~s~dg~i 408 (409)
++ ++.|++|++....+.... ..+ ..++|+| +++.|++++.||.+
T Consensus 278 ~s~~d~~i~v~~~~~~~~~~~~-----~~~---------------~~~~~~~~~~~~~~l~~~~~d~~~ 326 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTKNWTK-----DEE---------------SALCLQSDTADFTDMDVVCGDGGI 326 (343)
T ss_dssp EETTTTEEEEEEECTTTCSEEE-----EEE---------------EECCC----CCCCEEEEEEETTEE
T ss_pred ecCCCCcEEEEEEcccccceEe-----cCc---------------eeEecCccccccceeEEEecCCce
Confidence 64 699999999753332222 111 3677777 77788888777754
No 111
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.6e-28 Score=216.96 Aligned_cols=213 Identities=16% Similarity=0.310 Sum_probs=169.5
Q ss_pred cCCCcEEEEEECCC--CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 30 QDVDIVSAIEFDKT--GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 30 ~h~~~v~~v~~~~~--~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
.|...|++++|+++ +++|++|+.||.|++||+.+++. .....+.+|.
T Consensus 53 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-------------------------~~~~~~~~~~------ 101 (379)
T 3jrp_A 53 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW-------------------------SQIAVHAVHS------ 101 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE-------------------------EEEEEECCCS------
T ss_pred CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce-------------------------eEeeeecCCC------
Confidence 48999999999987 99999999999999999987642 2456677888
Q ss_pred ccceeccceEEEEEEecCC--CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 108 KSLEIEEKINRVRWCAAPN--GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..|.+++| +|+ +.+|++++.|+.|++||+..+......
T Consensus 102 ------~~v~~~~~--~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-------------------------------- 141 (379)
T 3jrp_A 102 ------ASVNSVQW--APHEYGPLLLVASSDGKVSVVEFKENGTTSPI-------------------------------- 141 (379)
T ss_dssp ------SCEEEEEE--CCGGGCSEEEEEETTSEEEEEECCTTSCCCEE--------------------------------
T ss_pred ------cceEEEEe--CCCCCCCEEEEecCCCcEEEEecCCCCceeeE--------------------------------
Confidence 89999999 677 899999999999999999876332110
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-------------CCCeEEEe-cCCeEEEEEccCCCc
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-------------DCETFVSA-DDLRINLWNLEISDQ 251 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-------------~~~~l~~~-~d~~i~lwd~~~~~~ 251 (409)
. +..|...|.+++|+| ++.+++++ .|+.|++||++....
T Consensus 142 --------------------------~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 194 (379)
T 3jrp_A 142 --------------------------I-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 194 (379)
T ss_dssp --------------------------E-EECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT
T ss_pred --------------------------E-ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 0 156888999999999 68999999 999999999983332
Q ss_pred eeeeeecCCCcCcCccCceEEEEEeCC---CCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccccc
Q 015290 252 CFNIVDMKPSNMDDLTEVITSAEFHPI---YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
..... ..+.+|...|.+++|+|+ + .+|++++.||.|++||++.+..... ..... ...|..
T Consensus 195 ~~~~~----~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~-----------~~~~~~ 257 (379)
T 3jrp_A 195 TYVLE----STLEGHSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQGPWK-KTLLK-----------EEKFPD 257 (379)
T ss_dssp EEEEE----EEECCCSSCEEEEEECCCCSSS-EEEEEEETTSCEEEEEESSTTSCCE-EEESS-----------SSCCSS
T ss_pred ceeeE----EEEecccCcEeEEEECCCCCCC-CeEEEEeCCCEEEEEeCCCCCccce-eeeec-----------cccCCC
Confidence 21111 125789999999999999 7 9999999999999999988642100 01111 123467
Q ss_pred ceeeeEeccCCCEEEEeec-CeEEEEEccC
Q 015290 329 SISDIKFANDGQHLLSRDY-MNLKLWDIRM 357 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~ 357 (409)
.|.+++|+|+|++|++++. +.|++||+..
T Consensus 258 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 258 VLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 8999999999999999874 9999999974
No 112
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=2.3e-27 Score=210.61 Aligned_cols=249 Identities=14% Similarity=0.153 Sum_probs=178.2
Q ss_pred cCCCcEEEEEECC--CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 30 QDVDIVSAIEFDK--TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 30 ~h~~~v~~v~~~~--~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
.|...|++++|+| ++++|++|+.||.|++||+.++... .....++.+..+.+|.
T Consensus 55 ~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~------------------~~~~~~~~~~~~~~~~------ 110 (351)
T 3f3f_A 55 AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEE------------------CSGRRWNKLCTLNDSK------ 110 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCT------------------TSSCSEEEEEEECCCS------
T ss_pred cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccc------------------ccccCcceeeeecccC------
Confidence 4899999999999 6999999999999999999876521 0111335677788888
Q ss_pred ccceeccceEEEEEEecCC--CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 108 KSLEIEEKINRVRWCAAPN--GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..|.+++| +|+ +.+|++++.|+.|++||+.+++..........
T Consensus 111 ------~~v~~~~~--~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------------------------- 155 (351)
T 3f3f_A 111 ------GSLYSVKF--APAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE--------------------------- 155 (351)
T ss_dssp ------SCEEEEEE--CCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE---------------------------
T ss_pred ------CceeEEEE--cCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc---------------------------
Confidence 89999999 677 99999999999999999987754332110000
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC---CCeEEEe-cCCeEEEEEccCCCceeeeeecCCC
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD---CETFVSA-DDLRINLWNLEISDQCFNIVDMKPS 261 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~ 261 (409)
..........|...+.+++|+|+ +..++++ .++.+.+|+.. .+..... .
T Consensus 156 ---------------------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~-----~ 208 (351)
T 3f3f_A 156 ---------------------MKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK-DGKLHVA-----A 208 (351)
T ss_dssp ---------------------EESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT-TSCEEEE-----E
T ss_pred ---------------------ccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC-CCceeee-----e
Confidence 00000111467888999999997 8999999 99999777776 4443211 1
Q ss_pred cCcCccCceEEEEEeCCCC---CEEEEEeCCCeEEEEeCCCccccccccccccc--------------------------
Q 015290 262 NMDDLTEVITSAEFHPIYC---NLLAYSSSRGFVRLVDMRQSALCDHSARILRD-------------------------- 312 (409)
Q Consensus 262 ~~~~~~~~v~~~~~~p~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-------------------------- 312 (409)
.+.+|...|++++|+|++. ++|++++.||.|++||++.+............
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 2678999999999999973 58999999999999999875321000000000
Q ss_pred ---cccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEE
Q 015290 313 ---AAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 313 ---~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~ 365 (409)
..........+.+|...|++++|+|++++|++|+ |+.|++||+.+ ++.+..+
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~-~~~~~~~ 344 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY-SNEFKCM 344 (351)
T ss_dssp --CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECT-TSCEEEE
T ss_pred eecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCc-Ccchhhe
Confidence 0000011223567889999999999999999997 59999999986 5444433
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2e-27 Score=218.00 Aligned_cols=279 Identities=7% Similarity=0.016 Sum_probs=201.8
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
....+.+++|+|++.++++++.++.|++||..+++.. + ......+.+|.
T Consensus 121 ~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~-------~---------------~~~~~~~~~~~--------- 169 (433)
T 3bws_A 121 TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTV-------R---------------LSPPEKYKKKL--------- 169 (433)
T ss_dssp CSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEE-------E---------------ECCCHHHHTTC---------
T ss_pred CCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEe-------e---------------ecCcccccccC---------
Confidence 3455679999998888888889999999999877631 0 00011345777
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
+.|.+++| ++++.++++++.|+.|++||+.+++.......+. .......+++++..++...
T Consensus 170 ---~~v~~~~~--~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~- 230 (433)
T 3bws_A 170 ---GFVETISI--PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG-------------KWSKILLYDPIRDLVYCSN- 230 (433)
T ss_dssp ---CEEEEEEE--GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS-------------SSEEEEEEETTTTEEEEEE-
T ss_pred ---CceeEEEE--cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC-------------CCeeEEEEcCCCCEEEEEe-
Confidence 79999999 7899999999999999999999877665443111 1122233344444443221
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-c--------CCeEEEEEccCCCceeeeeecCCC
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D--------DLRINLWNLEISDQCFNIVDMKPS 261 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~--------d~~i~lwd~~~~~~~~~~~~~~~~ 261 (409)
..++.|++||+.+. +.+..+ . ....+.+++|+|+++.++++ . |+.|++||+. .++....
T Consensus 231 ~~~~~i~~~d~~~~---~~~~~~-~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~-~~~~~~~------ 298 (433)
T 3bws_A 231 WISEDISVIDRKTK---LEIRKT-D-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD-KEKLIDT------ 298 (433)
T ss_dssp TTTTEEEEEETTTT---EEEEEC-C-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT-TTEEEEE------
T ss_pred cCCCcEEEEECCCC---cEEEEe-c-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC-CCcEEee------
Confidence 12789999999763 444443 3 34458999999999999887 4 6799999998 5655544
Q ss_pred cCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCE
Q 015290 262 NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH 341 (409)
Q Consensus 262 ~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 341 (409)
..|...+.+++|+|++..++++++.++.|++||+.+++.. ..+.. ...+.+++|+|+|++
T Consensus 299 --~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~----~~~~~--------------~~~~~~~~~s~dg~~ 358 (433)
T 3bws_A 299 --IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ----KSIPV--------------FDKPNTIALSPDGKY 358 (433)
T ss_dssp --EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE----EEEEC--------------SSSEEEEEECTTSSE
T ss_pred --ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE----EEecC--------------CCCCCeEEEcCCCCE
Confidence 2345678999999999345677789999999999876531 22222 356889999999998
Q ss_pred EEEeec----------------CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEccc-
Q 015290 342 LLSRDY----------------MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY- 404 (409)
Q Consensus 342 l~sg~~----------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~- 404 (409)
|++++. |.|++||+.+ ++.+..+..+... .+++|+|||++|++++.
T Consensus 359 l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-~~~~~~~~~~~~~----------------~~~~~s~dg~~l~~~~~~ 421 (433)
T 3bws_A 359 LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-DTVKEFWEAGNQP----------------TGLDVSPDNRYLVISDFL 421 (433)
T ss_dssp EEEEECCCCCTTTCTTSCCSSCCEEEEEETTT-TEEEEEEECSSSE----------------EEEEECTTSCEEEEEETT
T ss_pred EEEEecCCCccccccccccccceEEEEEECCC-CcEEEEecCCCCC----------------ceEEEcCCCCEEEEEECC
Confidence 887753 4999999986 7888887764432 58999999999987764
Q ss_pred CCCC
Q 015290 405 RRDN 408 (409)
Q Consensus 405 dg~i 408 (409)
|++|
T Consensus 422 d~~i 425 (433)
T 3bws_A 422 DHQI 425 (433)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 7765
No 114
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.7e-27 Score=218.57 Aligned_cols=240 Identities=15% Similarity=0.263 Sum_probs=181.3
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+|...|.+++| ++++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 171 ~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~---------------------------~~~~~~~h~-------- 213 (435)
T 1p22_A 171 GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE---------------------------MLNTLIHHC-------- 213 (435)
T ss_dssp CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC---------------------------EEEEECCCC--------
T ss_pred CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc---------------------------EEEEEcCCC--------
Confidence 48999999999 78899999999999999998776 467788898
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeee--ccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIK--EMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++| + +..+++++.|+.|++||+.++...... .......+.++.+ ++..++.
T Consensus 214 ----~~v~~l~~--~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--------------~~~~l~s 271 (435)
T 1p22_A 214 ----EAVLHLRF--N--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--------------DDKYIVS 271 (435)
T ss_dssp ----SCEEEEEC--C--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--------------ETTEEEE
T ss_pred ----CcEEEEEE--c--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--------------CCCEEEE
Confidence 89999999 3 459999999999999999877544211 1111122222221 2345555
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
++. |+.+++||+++ .+++..+ .+|...|.+++++ ++++++| .||.|++||++ .+..+.. +.+|
T Consensus 272 ~~~--dg~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~-~~~~~~~-------~~~h 335 (435)
T 1p22_A 272 ASG--DRTIKVWNTST---CEFVRTL-NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE-CGACLRV-------LEGH 335 (435)
T ss_dssp EET--TSEEEEEETTT---CCEEEEE-ECCSSCEEEEEEE--TTEEEEEETTSCEEEEETT-TCCEEEE-------ECCC
T ss_pred EeC--CCeEEEEECCc---CcEEEEE-cCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECC-CCCEEEE-------EeCC
Confidence 544 89999999976 4556665 7899999999994 6799999 99999999999 6666666 5789
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
...|.+++| ++ .+|++|+.||.|++||++++..... .........+.+|...|.+++| ++++|++|+
T Consensus 336 ~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~--------~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s 402 (435)
T 1p22_A 336 EELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRA--------PAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 402 (435)
T ss_dssp SSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTS--------CTTTTEEEEECCCSSCCCCEEE--CSSCEEECC
T ss_pred cCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCccc--------cccchheeeccCCCCCeEEEEe--CCCEEEEEe
Confidence 999999999 56 8999999999999999876542100 0000112234567889999999 678899987
Q ss_pred -cCeEEEEEccC
Q 015290 347 -YMNLKLWDIRM 357 (409)
Q Consensus 347 -~~~v~iwd~~~ 357 (409)
||.|++||+..
T Consensus 403 ~Dg~i~iwd~~~ 414 (435)
T 1p22_A 403 HDDTILIWDFLN 414 (435)
T ss_dssp SSSEEEEEC---
T ss_pred CCCEEEEEECCC
Confidence 59999999975
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=2.7e-27 Score=210.07 Aligned_cols=239 Identities=10% Similarity=0.053 Sum_probs=177.9
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCce----eeeeeccCCCcccccccccccccCceeccCCCCCc-eeecc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK----VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA-HGYHL 188 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 188 (409)
+.|.+++| +|++++|++++.|+.|++|++.++. ..... .. ...+..+.+++++. +++.+
T Consensus 12 ~~v~~~~~--s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~------------~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 12 DYISDIKI--IPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RY------------KHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp SCEEEEEE--EGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--EC------------SSCEEEEEEEESSSEEEEEE
T ss_pred CcEEEEEE--cCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--ec------------CCceEEEEECCCCCcEEEEE
Confidence 89999999 6899999999999999999998776 32222 11 22333444444555 66666
Q ss_pred cccccceeEEEec-CCcccceeeeeeccc--cccceeEEEeCCCCCeEEEe-cCCeEEEEEccCC--------Cceeeee
Q 015290 189 EWTENMATKIANV-GNSVHARCQKVYPHA--HDFNINSISNNSDCETFVSA-DDLRINLWNLEIS--------DQCFNIV 256 (409)
Q Consensus 189 ~~~~~~~i~~~~~-~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~--------~~~~~~~ 256 (409)
.. ++.|++|++ +.... ..+ .+ |...|.+++|+| ++.++++ .|+.|++||++.. ...+..
T Consensus 76 ~~--dg~i~~wd~~~~~~~----~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~- 146 (342)
T 1yfq_A 76 TV--QGEILKVDLIGSPSF----QAL-TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN- 146 (342)
T ss_dssp ET--TSCEEEECSSSSSSE----EEC-BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS-
T ss_pred cC--CCeEEEEEeccCCce----Eec-cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeE-
Confidence 54 899999999 76422 333 67 999999999999 9999999 9999999999820 333322
Q ss_pred ecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCC-ccccccccccccccccccCCcccccccccceeeeEe
Q 015290 257 DMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQ-SALCDHSARILRDAAESHGSKSFFTEIIASISDIKF 335 (409)
Q Consensus 257 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 335 (409)
+. |...+.+++|+|++ +++++.|+.|++||+++ +.... ... ...|...+.+++|
T Consensus 147 ------~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~---~~~------------~~~~~~~i~~i~~ 201 (342)
T 1yfq_A 147 ------TK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNG---TIE------------ESGLKYQIRDVAL 201 (342)
T ss_dssp ------SS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCC---EEE------------ECSCSSCEEEEEE
T ss_pred ------Ee-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccc---eee------------ecCCCCceeEEEE
Confidence 33 78899999999875 99999999999999987 43210 111 1223568999999
Q ss_pred cc-CCCEEEEeec-CeEEEEEccCC-----CcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 336 AN-DGQHLLSRDY-MNLKLWDIRMD-----STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 336 s~-~g~~l~sg~~-~~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+| +++++++++. +.|++|+++.. .+....+..|..... .......|.+++|+|++++|++++.||.|
T Consensus 202 ~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 275 (342)
T 1yfq_A 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK------DTNLAYPVNSIEFSPRHKFLYTAGSDGII 275 (342)
T ss_dssp CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT------CCSSCCCEEEEEECTTTCCEEEEETTSCE
T ss_pred CCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc------ccccceeEEEEEEcCCCCEEEEecCCceE
Confidence 99 9999999975 99999999864 278888888865210 00011123799999999999999999975
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.9e-27 Score=232.45 Aligned_cols=213 Identities=16% Similarity=0.299 Sum_probs=170.1
Q ss_pred cCCCcEEEEEECCC--CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 30 QDVDIVSAIEFDKT--GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 30 ~h~~~v~~v~~~~~--~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
+|.+.|++++|+|+ +++|++|+.||.|++||+.++.. .....+.+|.
T Consensus 51 ~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~-------------------------~~~~~~~~h~------ 99 (753)
T 3jro_A 51 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW-------------------------SQIAVHAVHS------ 99 (753)
T ss_dssp CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE-------------------------EEEEEECCCS------
T ss_pred CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc-------------------------cccccccCCC------
Confidence 48999999999998 99999999999999999987642 2456778888
Q ss_pred ccceeccceEEEEEEecCC--CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 108 KSLEIEEKINRVRWCAAPN--GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..|.+++| +|+ +..+++++.||.|++||+.++......
T Consensus 100 ------~~V~~v~~--sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-------------------------------- 139 (753)
T 3jro_A 100 ------ASVNSVQW--APHEYGPLLLVASSDGKVSVVEFKENGTTSPI-------------------------------- 139 (753)
T ss_dssp ------SCEEEEEE--CCGGGCSEEEEEETTSEEEEEECCSSSCCCCE--------------------------------
T ss_pred ------CCeEEEEE--CCCCCCCEEEEEeCCCcEEEEEeecCCCccee--------------------------------
Confidence 89999999 677 999999999999999999876332110
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-------------CCCeEEEe-cCCeEEEEEccCCCc
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-------------DCETFVSA-DDLRINLWNLEISDQ 251 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-------------~~~~l~~~-~d~~i~lwd~~~~~~ 251 (409)
. +.+|...|.+++|+| +++.+++| .||.|++||++....
T Consensus 140 --------------------------~-~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~ 192 (753)
T 3jro_A 140 --------------------------I-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 192 (753)
T ss_dssp --------------------------E-EECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT
T ss_pred --------------------------E-eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc
Confidence 0 157888999999999 58999999 999999999984332
Q ss_pred eeeeeecCCCcCcCccCceEEEEEeCC---CCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccccc
Q 015290 252 CFNIVDMKPSNMDDLTEVITSAEFHPI---YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
..... ..+.+|...|++++|+|+ + .+|++++.||.|++||++++..... ... .....|..
T Consensus 193 ~~~~~----~~~~~h~~~V~~l~~sp~~~~~-~~l~s~s~Dg~I~iwd~~~~~~~~~--~~~----------~~~~~~~~ 255 (753)
T 3jro_A 193 TYVLE----STLEGHSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQGPWK--KTL----------LKEEKFPD 255 (753)
T ss_dssp EEEEE----EEECCCSSCEEEEEECCCCSSS-EEEEEEESSSCEEEEEESSSSSCCB--CCB----------SSSSCCSS
T ss_pred cceee----eeecCCCCcEEEEEeccCCCCC-CEEEEEecCCEEEEecCCCCCCcce--eEE----------eccCCCCC
Confidence 21111 125789999999999999 7 9999999999999999988642100 000 11234567
Q ss_pred ceeeeEeccCCCEEEEee-cCeEEEEEccC
Q 015290 329 SISDIKFANDGQHLLSRD-YMNLKLWDIRM 357 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~ 357 (409)
.|++++|+|+|++|++|+ ||.|++||+..
T Consensus 256 ~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 256 VLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred ceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 899999999999999987 59999999874
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=3.9e-26 Score=206.53 Aligned_cols=257 Identities=9% Similarity=0.091 Sum_probs=191.8
Q ss_pred CEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccceEEEEEEec
Q 015290 45 DYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWCAA 124 (409)
Q Consensus 45 ~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~~s 124 (409)
.++++++.|+.|++||+.+++ .+..+..|. .+.+++| +
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~---------------------------~~~~~~~~~-------------~~~~~~~--s 40 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNK---------------------------VTATIPVGS-------------NPMGAVI--S 40 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE---------------------------EEEEEECSS-------------SEEEEEE--C
T ss_pred EEEEEcCCCCEEEEEECCCCe---------------------------EEEEeecCC-------------CcceEEE--C
Confidence 467889999999999998776 355666665 6899999 7
Q ss_pred CCCCEE-EEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecCC
Q 015290 125 PNGSMF-ILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGN 203 (409)
Q Consensus 125 ~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 203 (409)
|+++++ ++++.|+.|++||+.+++......... .+..+.+++++..++.+.. .++.|++||+.+
T Consensus 41 ~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--------------~v~~~~~spdg~~l~~~~~-~~~~v~v~d~~~ 105 (391)
T 1l0q_A 41 PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--------------SPQGVAVSPDGKQVYVTNM-ASSTLSVIDTTS 105 (391)
T ss_dssp TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--------------SEEEEEECTTSSEEEEEET-TTTEEEEEETTT
T ss_pred CCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--------------CccceEECCCCCEEEEEEC-CCCEEEEEECCC
Confidence 999877 566799999999999888766544221 2334444555554433321 268999999986
Q ss_pred cccceeeeeeccccccceeEEEeCCCCCeE-EEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCC
Q 015290 204 SVHARCQKVYPHAHDFNINSISNNSDCETF-VSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCN 281 (409)
Q Consensus 204 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 281 (409)
. +.+..+ . +...+.+++|+|+++.+ +++ .++.|++||+. .++....+ ..+ ..+.+++|+|++ +
T Consensus 106 ~---~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~~-------~~~-~~~~~~~~~~dg-~ 170 (391)
T 1l0q_A 106 N---TVAGTV-K-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV-TKAVINTV-------SVG-RSPKGIAVTPDG-T 170 (391)
T ss_dssp T---EEEEEE-E-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEE-------ECC-SSEEEEEECTTS-S
T ss_pred C---eEEEEE-e-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECC-CCcEEEEE-------ecC-CCcceEEECCCC-C
Confidence 3 444443 2 34568999999999987 567 89999999998 66666552 323 456899999999 6
Q ss_pred EE-EEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee----cCeEEEEEcc
Q 015290 282 LL-AYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD----YMNLKLWDIR 356 (409)
Q Consensus 282 ~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~----~~~v~iwd~~ 356 (409)
.+ ++++.++.|++||+++++. ...+.. ...+.+++|+|+|++|++++ ++.|++||+.
T Consensus 171 ~l~~~~~~~~~v~~~d~~~~~~----~~~~~~--------------~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 171 KVYVANFDSMSISVIDTVTNSV----IDTVKV--------------EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE----EEEEEC--------------SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred EEEEEeCCCCEEEEEECCCCeE----EEEEec--------------CCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 65 6778899999999988753 122222 34688999999999888775 3999999998
Q ss_pred CCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeE-EEcccCCCC
Q 015290 357 MDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHF-ATGSYRRDN 408 (409)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l-~s~s~dg~i 408 (409)
+ ++.+..+..+... .+++|+|||++| ++++.|+.|
T Consensus 233 ~-~~~~~~~~~~~~~----------------~~~~~s~dg~~l~~s~~~d~~v 268 (391)
T 1l0q_A 233 T-NKITARIPVGPDP----------------AGIAVTPDGKKVYVALSFXNTV 268 (391)
T ss_dssp T-TEEEEEEECCSSE----------------EEEEECTTSSEEEEEETTTTEE
T ss_pred C-CeEEEEEecCCCc----------------cEEEEccCCCEEEEEcCCCCEE
Confidence 6 7888888776653 489999999977 677778764
No 118
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=1.1e-26 Score=210.97 Aligned_cols=261 Identities=12% Similarity=0.130 Sum_probs=177.2
Q ss_pred cCCCcEEEEEECC-CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 30 QDVDIVSAIEFDK-TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 30 ~h~~~v~~v~~~~-~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.|...|.+++|+| ++.+|++++.||.|++||+.+++. ...+. +.
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---------------------------~~~~~-~~------- 141 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT---------------------------ADVFN-FE------- 141 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE---------------------------EEEEE-CS-------
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc---------------------------ceecc-CC-------
Confidence 4899999999999 788999999999999999987652 23333 34
Q ss_pred cceeccceEEEEEEe-cCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCc-eee
Q 015290 109 SLEIEEKINRVRWCA-APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA-HGY 186 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~-s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (409)
..+.++.|.| ++++.++++++.|+.|++||+.+++.......+ ...+..+.+++.+. +++
T Consensus 142 -----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~ll~ 203 (408)
T 4a11_B 142 -----ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH-------------RQEILAVSWSPRYDYILA 203 (408)
T ss_dssp -----SCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCC-------------CSCEEEEEECSSCTTEEE
T ss_pred -----CceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCC-------------CCcEEEEEECCCCCcEEE
Confidence 6899999953 225569999999999999999988765544321 22333444455554 355
Q ss_pred cccccccceeEEEecCCcccc------------eeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCcee
Q 015290 187 HLEWTENMATKIANVGNSVHA------------RCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCF 253 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~------------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~ 253 (409)
++.. ++.+++||+...... .........|...|.+++|+|++++|+++ .|+.|++||+. .+...
T Consensus 204 ~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~ 280 (408)
T 4a11_B 204 TASA--DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS-NGENT 280 (408)
T ss_dssp EEET--TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCBC
T ss_pred EEcC--CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC-CCccc
Confidence 5554 899999999764310 01111125788999999999999999999 99999999998 44433
Q ss_pred eeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeee
Q 015290 254 NIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDI 333 (409)
Q Consensus 254 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 333 (409)
....... .......+........+ ..+++++.++.|++||+.+++. +..+ .+|...|.++
T Consensus 281 ~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~d~~~~~~----~~~~-------------~~~~~~v~~~ 340 (408)
T 4a11_B 281 LVNYGKV--CNNSKKGLKFTVSCGCS-SEFVFVPYGSTIAVYTVYSGEQ----ITML-------------KGHYKTVDCC 340 (408)
T ss_dssp CCCCCCC--CCCCSSCCCCEECCSSS-SCEEEEEETTEEEEEETTTCCE----EEEE-------------CCCSSCEEEE
T ss_pred eeccccc--cccccccceeEEecCCC-ceEEEEecCCEEEEEECcCCcc----eeee-------------ccCCCeEEEE
Confidence 2211110 01111111122222333 6677778899999999988754 2333 3457789999
Q ss_pred EeccCCCEEEEee-cCeEEEEEccCCCcceEEEec
Q 015290 334 KFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKI 367 (409)
Q Consensus 334 ~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~ 367 (409)
+|+|++++|++|+ ||.|++||+.+ ++++.....
T Consensus 341 ~~s~~~~~l~s~~~dg~i~iw~~~~-~~~~~~~~~ 374 (408)
T 4a11_B 341 VFQSNFQELYSGSRDCNILAWVPSL-YEPVPDDDE 374 (408)
T ss_dssp EEETTTTEEEEEETTSCEEEEEECC----------
T ss_pred EEcCCCCEEEEECCCCeEEEEeCCC-CCccCCCCc
Confidence 9999999999997 49999999986 666554443
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.9e-27 Score=202.02 Aligned_cols=223 Identities=10% Similarity=0.041 Sum_probs=147.7
Q ss_pred CCCcEEEEEECCC----CCEEEEEecCCeEEEEeccCCcCCCCccchhhh-hhhccc--ccccCCCceeeeeeecCCCcc
Q 015290 31 DVDIVSAIEFDKT----GDYLAVGDRGGRVILFETVGGKNTPNQHISRSE-LEKQMD--FTSTSHPEYRYKTEFQSHEPE 103 (409)
Q Consensus 31 h~~~v~~v~~~~~----~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~h~~~ 103 (409)
|...|.+++|+|| ++++++++.+ +++|++.+++.. .. ..++.. ..+...|..+.+..+.+|.
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv-------~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~-- 178 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLV-------SSSGTLSDQQVEVMTFAEDGGGKENQFLMP-- 178 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEE-------EEESSSTTCEEEEEEECTTSCEEEEEEECC--
T ss_pred cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEE-------EecccCCCCcEEEEEECCCCceeeeeccCC--
Confidence 3458999999999 9999988753 666776554420 11 111111 1222334445666677777
Q ss_pred ccccccceeccceEEEEEEe-cCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC
Q 015290 104 FDYLKSLEIEEKINRVRWCA-APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 182 (409)
Q Consensus 104 ~~~~~~~~~~~~v~~l~~~~-s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (409)
..++.++|.| .-++..|++++.|++|+|||+.+++....+..+
T Consensus 179 ----------~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~-------------------------- 222 (356)
T 2w18_A 179 ----------PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID-------------------------- 222 (356)
T ss_dssp ----------CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC--------------------------
T ss_pred ----------CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC--------------------------
Confidence 6788888853 237799999999999999999998766553211
Q ss_pred ceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeE------------EEe-cCCeEEEEEccCC
Q 015290 183 AHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETF------------VSA-DDLRINLWNLEIS 249 (409)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l------------~~~-~d~~i~lwd~~~~ 249 (409)
..+...+.+++|+|+|+++ ++| .|++|++||.. +
T Consensus 223 --------------------------------~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~-t 269 (356)
T 2w18_A 223 --------------------------------DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK-T 269 (356)
T ss_dssp --------------------------------C---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT-T
T ss_pred --------------------------------CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC-C
Confidence 1122356677888888765 567 89999999998 6
Q ss_pred CceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccc
Q 015290 250 DQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIAS 329 (409)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (409)
+..+.++.... ..+|...+.+..++ + .++++++.|++|+|||+.+++. ...+.. |...
T Consensus 270 gk~l~v~~~~~--p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tGk~----l~tL~g-------------H~~~ 327 (356)
T 2w18_A 270 TLSVGVMLYCL--PPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLGQC----TALLPP-------------VSDQ 327 (356)
T ss_dssp TEEEEEEEECC--CTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTTCSE----EEEECC-------------C--C
T ss_pred CEEEEEEEeec--cCCCcceeEccccC--C-CEEEEEcCCCcEEEEECCCCcE----EEEecC-------------CCCC
Confidence 76665532110 13566655555554 6 8999999999999999999874 244443 3444
Q ss_pred e-eeeEeccCCCEEEEee-cCeEEEEEc
Q 015290 330 I-SDIKFANDGQHLLSRD-YMNLKLWDI 355 (409)
Q Consensus 330 i-~~~~~s~~g~~l~sg~-~~~v~iwd~ 355 (409)
+ ..++|+|||++|++|+ |++|+|||+
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 4 4689999999999998 499999996
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=3.7e-27 Score=211.13 Aligned_cols=242 Identities=13% Similarity=0.160 Sum_probs=174.0
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
...|...|++++|+|++++|++|+.||.|++||+.+++. ..+.+|.
T Consensus 82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----------------------------~~~~~~~------ 127 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA----------------------------IQIAQHD------ 127 (368)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----------------------------EEEEECS------
T ss_pred eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCc----------------------------eeecccc------
Confidence 344899999999999999999999999999999987752 2355677
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..|.+++|+|++++.+|++++.|+.|++||+.+++.......+. .......... .+..
T Consensus 128 ------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~~~~~~~--~~~~ 185 (368)
T 3mmy_A 128 ------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE--------------RCYCADVIYP--MAVV 185 (368)
T ss_dssp ------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS--------------CEEEEEEETT--EEEE
T ss_pred ------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC--------------CceEEEecCC--eeEE
Confidence 89999999877899999999999999999999887655544221 1111111111 2222
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCe----EEEe-cCCeEEEEEccCCC--ceeeeeecCC
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCET----FVSA-DDLRINLWNLEISD--QCFNIVDMKP 260 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~----l~~~-~d~~i~lwd~~~~~--~~~~~~~~~~ 260 (409)
+. .++.+++|++....... ......+...+.++++.++... ++++ .|+.|++||++... .....
T Consensus 186 ~~--~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~----- 256 (368)
T 3mmy_A 186 AT--AERGLIVYQLENQPSEF--RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT----- 256 (368)
T ss_dssp EE--GGGCEEEEECSSSCEEE--EECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE-----
T ss_pred Ee--CCCcEEEEEeccccchh--hhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee-----
Confidence 22 27789999997643222 2221334455566666555444 8888 99999999998332 22333
Q ss_pred CcCcCccC------------ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccccccc
Q 015290 261 SNMDDLTE------------VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 261 ~~~~~~~~------------~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
+.+|.. .|++++|+|++ ++|++++.||.|++||+++++. +..+ .+|..
T Consensus 257 --~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~~~~----~~~~-------------~~~~~ 316 (368)
T 3mmy_A 257 --FKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDARTK----LKTS-------------EQLDQ 316 (368)
T ss_dssp --EECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTTTEE----EEEC-------------CCCSS
T ss_pred --eeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCCCcE----EEEe-------------cCCCC
Confidence 334433 79999999999 9999999999999999998653 2223 33467
Q ss_pred ceeeeEeccCCCEEEEeec-CeEEEEE
Q 015290 329 SISDIKFANDGQHLLSRDY-MNLKLWD 354 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~sg~~-~~v~iwd 354 (409)
.|.+++|+|+|++|++++. +..+.|+
T Consensus 317 ~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 317 PISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp CEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred CceEEEECCCCCeEEEEeccccccccc
Confidence 8999999999999999863 5444333
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=4.7e-27 Score=215.12 Aligned_cols=227 Identities=16% Similarity=0.249 Sum_probs=171.5
Q ss_pred ccCCCcEEEEEECCCCC-EEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 29 LQDVDIVSAIEFDKTGD-YLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~-~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..|...|++++|+|++. +|++|+.||.|++|++...... .........+.+|.
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--------------------~~~~~~~~~~~~h~------ 231 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE--------------------HRVIDAKNIFTGHT------ 231 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBG--------------------GGEEECSEEECCCS------
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCC--------------------CceeccceeecCCC------
Confidence 45899999999999988 9999999999999999874320 00112245567888
Q ss_pred ccceeccceEEEEEEecC-CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 108 KSLEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
..|.+++| +| ++.+|++++.|+.|++||++++...
T Consensus 232 ------~~v~~v~~--~p~~~~~l~s~~~dg~i~i~d~~~~~~~------------------------------------ 267 (430)
T 2xyi_A 232 ------AVVEDVAW--HLLHESLFGSVADDQKLMIWDTRNNNTS------------------------------------ 267 (430)
T ss_dssp ------SCEEEEEE--CSSCTTEEEEEETTSEEEEEETTCSCSS------------------------------------
T ss_pred ------CCEeeeEE--eCCCCCEEEEEeCCCeEEEEECCCCCCC------------------------------------
Confidence 89999999 56 6789999999999999999875311
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCC-eEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
.++..+ ..|...|++++|+|+++ .+++| .||.|++||++.....+.. +.
T Consensus 268 ---------------------~~~~~~-~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~-------~~ 318 (430)
T 2xyi_A 268 ---------------------KPSHTV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS-------FE 318 (430)
T ss_dssp ---------------------SCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE-------EE
T ss_pred ---------------------cceeEe-ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE-------ee
Confidence 111111 56888999999999987 57788 9999999999944555555 56
Q ss_pred CccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC-EEE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLL 343 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~ 343 (409)
.|...|.+++|+|++..+|++++.||.|++||++...... .........+.....+.+|...|.+++|+|+++ +|+
T Consensus 319 ~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 395 (430)
T 2xyi_A 319 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ---STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIIC 395 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC---CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEE
T ss_pred cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc---CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEE
Confidence 7899999999999985689999999999999998732110 000000011122233456788999999999999 788
Q ss_pred Eeec-CeEEEEEccC
Q 015290 344 SRDY-MNLKLWDIRM 357 (409)
Q Consensus 344 sg~~-~~v~iwd~~~ 357 (409)
++++ +.|+||++..
T Consensus 396 s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 396 SVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEETTSEEEEEEECH
T ss_pred EEECCCCEEEeEccc
Confidence 8875 9999999863
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=2e-27 Score=214.91 Aligned_cols=227 Identities=13% Similarity=0.123 Sum_probs=147.9
Q ss_pred cccCCCcEEEEEECC--------CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecC
Q 015290 28 ELQDVDIVSAIEFDK--------TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQS 99 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~--------~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (409)
..+|.+.|++|+|+| |+++||+|+.|++|+|||+.++. ....+.+
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~---------------------------~~~~~~~ 184 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG---------------------------PILAGYP 184 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE---------------------------EEEEEEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc---------------------------eeeeecC
Confidence 346999999999998 88999999999999999998665 2445566
Q ss_pred CCccccccccceeccceEEEEEEecCCC-CEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccC
Q 015290 100 HEPEFDYLKSLEIEEKINRVRWCAAPNG-SMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHN 178 (409)
Q Consensus 100 h~~~~~~~~~~~~~~~v~~l~~~~s~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (409)
|. ..|.+++| +|++ .+|++++.|++|++||+.+++........... .....+....
T Consensus 185 ~~------------~~v~~v~~--~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~---------~~~~~~s~~~ 241 (393)
T 4gq1_A 185 LS------------SPGISVQF--RPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV---------KNPWLLTLNT 241 (393)
T ss_dssp CS------------SCEEEEEE--ETTEEEEEEEEETTSEEEEEETTCCC----------C---------SCCCSEEEES
T ss_pred CC------------CCcEEEEE--CCCCCceEEecCCCCEEEEEECCCCcccccccccCCc---------ccceEEeccc
Confidence 76 79999999 5766 47999999999999999887654332211000 0000000000
Q ss_pred CCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeC-CCCCeEEEe-cCCeEEEEEccCCCceeeee
Q 015290 179 PPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNN-SDCETFVSA-DDLRINLWNLEISDQCFNIV 256 (409)
Q Consensus 179 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~ 256 (409)
.. ...... ..+|...+.++.|+ |+++.++++ .|+++++||+. .+.....
T Consensus 242 --------------~~------------~~~~~~-~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~-~~~~~~~- 292 (393)
T 4gq1_A 242 --------------LP------------LVNTCH-SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF-ANNDYNE- 292 (393)
T ss_dssp --------------GG------------GC-------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------
T ss_pred --------------cc------------ceeeee-cccccccceeeeeecCCCCEEEEEeCCCCEEEEECc-cCCCCce-
Confidence 00 000000 15788889999986 799999999 99999999998 4333322
Q ss_pred ecCCCcCcCccCce------------------EEEEEeC-CCCCEEEEEeCCCeEEEEeCCCcccccccccccccccccc
Q 015290 257 DMKPSNMDDLTEVI------------------TSAEFHP-IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESH 317 (409)
Q Consensus 257 ~~~~~~~~~~~~~v------------------~~~~~~p-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 317 (409)
+..|...+ ....|+| .+..++++|+.||.|++||+.+++.. ...
T Consensus 293 ------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~----~~~------- 355 (393)
T 4gq1_A 293 ------ISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN----SIP------- 355 (393)
T ss_dssp -----------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC----EEE-------
T ss_pred ------EeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE----EEe-------
Confidence 12222222 2233443 23146778889999999999887532 111
Q ss_pred CCcccccccccceeeeEeccCCCEEEEeecCeEEEEEcc
Q 015290 318 GSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIR 356 (409)
Q Consensus 318 ~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~ 356 (409)
.+|..+|.+++|+|||++||+++++.+.+|.+.
T Consensus 356 ------~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 356 ------IQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp ------EECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred ------cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 234578999999999999999998778888764
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8e-26 Score=208.30 Aligned_cols=255 Identities=12% Similarity=0.110 Sum_probs=182.0
Q ss_pred cCCCcEEEEEECCCCCEE-EEEecCCeEEEEecc--CCcCCCCccchhhhhhhcccccccCCCceeeeeeec--CCCccc
Q 015290 30 QDVDIVSAIEFDKTGDYL-AVGDRGGRVILFETV--GGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQ--SHEPEF 104 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~l-a~~~~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~~ 104 (409)
.|.+.|++++|+|++++| |+|+.||.|+|||+. ++.. +..+. .|.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~---------------------------~~~~~~~~~~--- 149 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV---------------------------LKLRKRFCFS--- 149 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC---------------------------EEEEEEEECS---
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce---------------------------eeeeecccCC---
Confidence 467789999999999996 899999999999998 5542 33443 444
Q ss_pred cccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCC---
Q 015290 105 DYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPS--- 181 (409)
Q Consensus 105 ~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 181 (409)
..|.+++| +|++++|++++.|+.|++|++.++........ .+......+..+.++++
T Consensus 150 ---------~~v~~~~~--sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~---------~~~~h~~~v~~~~~sp~~~~ 209 (450)
T 2vdu_B 150 ---------KRPNAISI--AEDDTTVIIADKFGDVYSIDINSIPEEKFTQE---------PILGHVSMLTDVHLIKDSDG 209 (450)
T ss_dssp ---------SCEEEEEE--CTTSSEEEEEETTSEEEEEETTSCCCSSCCCC---------CSEECSSCEEEEEEEECTTS
T ss_pred ---------CCceEEEE--cCCCCEEEEEeCCCcEEEEecCCcccccccce---------eeecccCceEEEEEcCCCCC
Confidence 78999999 79999999999999999999987754320000 00011223334445555
Q ss_pred CceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCC
Q 015290 182 FAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 182 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
+.+++++.. |+.|++||+.+ .+++..++.+|...|.+++|+ ++++|+++ .|+.|++||++ .++.+..+....
T Consensus 210 ~~~l~s~~~--d~~i~vwd~~~---~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~-~~~~~~~~~~~~ 282 (450)
T 2vdu_B 210 HQFIITSDR--DEHIKISHYPQ---CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK-TGKNLSTFDYNS 282 (450)
T ss_dssp CEEEEEEET--TSCEEEEEESC---TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT-TCCEEEEEECHH
T ss_pred CcEEEEEcC--CCcEEEEECCC---CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC-CCcEeeeecchh
Confidence 667776665 89999999976 445555547899999999999 99999999 99999999999 666666643210
Q ss_pred ------------------CcCcCccCceEEEEEeCCCCCEEEEEe-CCCeEEEEeC--CCccccccccccccccccccCC
Q 015290 261 ------------------SNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDM--RQSALCDHSARILRDAAESHGS 319 (409)
Q Consensus 261 ------------------~~~~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~ 319 (409)
.........|.+++|+|++ ++|++++ .++.|++||+ ..+.. ......+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~-l~~~~~~~-------- 352 (450)
T 2vdu_B 283 LIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGD-LALKQIIT-------- 352 (450)
T ss_dssp HHGGGCCTTSBC----------CBCCCEEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTC-EEEEEEEE--------
T ss_pred hhhhhhhhcccccccccccccccceEEEEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCc-eeeccEec--------
Confidence 0001234578999999999 8898888 8999999999 43311 01112222
Q ss_pred cccccccccceeeeEeccCCCEEEEee-------cCeEEEEEccC
Q 015290 320 KSFFTEIIASISDIKFANDGQHLLSRD-------YMNLKLWDIRM 357 (409)
Q Consensus 320 ~~~~~~~~~~i~~~~~s~~g~~l~sg~-------~~~v~iwd~~~ 357 (409)
.| ..+.+++|+|++.++++++ +..|.+|.+..
T Consensus 353 -----~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 353 -----FP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp -----CS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred -----cC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 23 5799999999654444443 24488888764
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.4e-24 Score=196.39 Aligned_cols=250 Identities=11% Similarity=0.102 Sum_probs=184.1
Q ss_pred cCCCcEEEEEECCCCCEE-EEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYL-AVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~l-a~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+...+.+++|+|++++| ++++.|+.|++||..+++. +..+..+
T Consensus 29 ~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~---------------------------~~~~~~~-------- 73 (391)
T 1l0q_A 29 PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV---------------------------IATVPAG-------- 73 (391)
T ss_dssp ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE---------------------------EEEEECS--------
T ss_pred ecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE---------------------------EEEEECC--------
Confidence 344568999999999977 6777999999999987762 3444444
Q ss_pred cceeccceEEEEEEecCCCCEEEEE-eCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee-e
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILS-TNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG-Y 186 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 186 (409)
..+.+++| +|++++|+.+ +.++.|++||+.+++........ .......+++++..+ +
T Consensus 74 -----~~v~~~~~--spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 74 -----SSPQGVAV--SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG--------------KSPLGLALSPDGKKLYV 132 (391)
T ss_dssp -----SSEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--------------SSEEEEEECTTSSEEEE
T ss_pred -----CCccceEE--CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC--------------CCcceEEECCCCCEEEE
Confidence 47999999 7999988655 56799999999988776554321 123344455555544 3
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeE-EEe-cCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETF-VSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
.+. .++.|++||+.+ .+.+..+ ..+ ..+.+++|+|+++.+ +++ .++.|++||++ .+.....+
T Consensus 133 ~~~--~~~~v~~~d~~~---~~~~~~~-~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~~-------- 196 (391)
T 1l0q_A 133 TNN--GDKTVSVINTVT---KAVINTV-SVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTV-TNSVIDTV-------- 196 (391)
T ss_dssp EET--TTTEEEEEETTT---TEEEEEE-ECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEE--------
T ss_pred EeC--CCCEEEEEECCC---CcEEEEE-ecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECC-CCeEEEEE--------
Confidence 333 378999999976 3444444 333 457899999999888 566 89999999998 56655542
Q ss_pred CccCceEEEEEeCCCCCEEEEEe---CCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSS---SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH 341 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 341 (409)
.+...+.+++|+|++ ++|++++ .++.|++||+++++. ...+.. ...+.+++|+|+|++
T Consensus 197 ~~~~~~~~~~~~~~g-~~l~~~~~~~~~~~v~~~d~~~~~~----~~~~~~--------------~~~~~~~~~s~dg~~ 257 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEG-TKAYVTNVDKYFNTVSMIDTGTNKI----TARIPV--------------GPDPAGIAVTPDGKK 257 (391)
T ss_dssp ECSSEEEEEEECTTS-SEEEEEEECSSCCEEEEEETTTTEE----EEEEEC--------------CSSEEEEEECTTSSE
T ss_pred ecCCCccceEECCCC-CEEEEEecCcCCCcEEEEECCCCeE----EEEEec--------------CCCccEEEEccCCCE
Confidence 245678999999999 8888777 689999999988753 233333 135788999999998
Q ss_pred EE-Eee-cCeEEEEEccCCCcceEEEecccCc
Q 015290 342 LL-SRD-YMNLKLWDIRMDSTPVATFKIHEHL 371 (409)
Q Consensus 342 l~-sg~-~~~v~iwd~~~~~~~~~~~~~~~~~ 371 (409)
|+ +++ ++.|++||+.+ ++.+..+..+..+
T Consensus 258 l~~s~~~d~~v~v~d~~~-~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 258 VYVALSFXNTVSVIDTAT-NTITATMAVGKNP 288 (391)
T ss_dssp EEEEETTTTEEEEEETTT-TEEEEEEECSSSE
T ss_pred EEEEcCCCCEEEEEECCC-CcEEEEEECCcCC
Confidence 84 555 49999999986 8888888777654
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=3.3e-25 Score=197.49 Aligned_cols=239 Identities=11% Similarity=0.056 Sum_probs=159.9
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 193 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (409)
+.|++++| +|+|++|++|+.++ +++|++.+++........ .+. .+.... ........+.. +
T Consensus 20 ~~V~~v~f--s~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~---~~~----------~~~~~~-~~~~~~~~~~~--d 80 (355)
T 3vu4_A 20 NPVTDYEF--NQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR---HLS----------KVRMLH-RTNYVAFVTGV--K 80 (355)
T ss_dssp CCCCEEEE--CTTSSEEEEECSSE-EEEEEETTEEEEEEEECS---CCC----------EEEECT-TSSEEEEECSS--T
T ss_pred CceEEEEE--CCCCCEEEEEcCCE-EEEEecCCcceeeeeecC---CeE----------EEEEcC-CCCEEEEEECC--c
Confidence 89999999 89999999888765 789999877655433211 011 111111 11122222222 5
Q ss_pred ceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEE
Q 015290 194 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSA 273 (409)
Q Consensus 194 ~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 273 (409)
+.|++||..+ ++++..+ .+...|.+++++++. ++++.++.|++||+....+.+.. +.. ....+
T Consensus 81 ~~v~iWd~~~---~~~~~~~--~~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~-------~~~---~~~~~ 143 (355)
T 3vu4_A 81 EVVHIWDDVK---KQDVSRI--KVDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITD-------DIR---FGGVC 143 (355)
T ss_dssp TEEEEEETTT---TEEEEEE--ECSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSC-------CEE---EEEEE
T ss_pred cEEEEEECCC---CcEEEEE--ECCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEE-------ecc---CCceE
Confidence 7999999976 4455544 366789999998764 55557889999999833144433 222 34456
Q ss_pred EEeCCCCCEEEE-EeCCCeEEEEeCCCccccccccccccccccccCC-cccccccccceeeeEeccCCCEEEEeec-Ce-
Q 015290 274 EFHPIYCNLLAY-SSSRGFVRLVDMRQSALCDHSARILRDAAESHGS-KSFFTEIIASISDIKFANDGQHLLSRDY-MN- 349 (409)
Q Consensus 274 ~~~p~~~~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~- 349 (409)
++++ . .++++ |+.||.|++||+++++........... ....+ ...+.+|...|.+++|+|+|++||+|+. ++
T Consensus 144 ~~s~-~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~--~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 144 EFSN-G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQ--KAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTI 219 (355)
T ss_dssp EEET-T-EEEEEESSCTTCEEEEECCC--------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSE
T ss_pred EEEc-c-EEEEeCCCcCcEEEEEECCCCCccccccccccc--cccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCE
Confidence 6777 3 33333 689999999999875421000000000 00011 3446778999999999999999999985 98
Q ss_pred EEEEEccCCCcceEEEe-c-ccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 350 LKLWDIRMDSTPVATFK-I-HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 350 v~iwd~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
|++||+++ ++++..+. + |...+ .+++|+|||++|++++.|++|
T Consensus 220 v~iwd~~~-~~~~~~~~~g~h~~~v---------------~~~~~s~~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 220 IRVFKTED-GVLVREFRRGLDRADV---------------VDMKWSTDGSKLAVVSDKWTL 264 (355)
T ss_dssp EEEEETTT-CCEEEEEECTTCCSCE---------------EEEEECTTSCEEEEEETTCEE
T ss_pred EEEEECCC-CcEEEEEEcCCCCCcE---------------EEEEECCCCCEEEEEECCCEE
Confidence 99999986 88888888 5 77765 699999999999999999875
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=8.9e-24 Score=193.70 Aligned_cols=239 Identities=11% Similarity=0.087 Sum_probs=181.7
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.|...|.+++|+|+++++++++.|+.|++||+.+++ .+..+..|.
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~---------------------------~~~~~~~~~-------- 211 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA---------------------------YKATVDLTG-------- 211 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC---------------------------EEEEEECSS--------
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce---------------------------EEEEEcCCC--------
Confidence 578899999999999999999999999999998765 355666777
Q ss_pred ceeccceEEEEEEecCCCCEEEEE-eCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILS-TNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..+.+++| +|+++.++++ +.|+.|++||+.+++........ .....+.+++++..++.+
T Consensus 212 ----~~~~~~~~--~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--------------~~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 212 ----KWSKILLY--DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI--------------GLPRGLLLSKDGKELYIA 271 (433)
T ss_dssp ----SSEEEEEE--ETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC--------------SEEEEEEECTTSSEEEEE
T ss_pred ----CCeeEEEE--cCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC--------------CCceEEEEcCCCCEEEEE
Confidence 78999999 7899888655 57999999999988765543321 123344455566565555
Q ss_pred ccc------ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeE-EEe-cCCeEEEEEccCCCceeeeeecCC
Q 015290 189 EWT------ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETF-VSA-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 189 ~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
... .++.|++||+.+. +.+.. ..+...+.+++|+|+++.+ +++ .++.|++||+. .++....+
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~---~~~~~--~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~-~~~~~~~~---- 341 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKE---KLIDT--IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLK-EKKVQKSI---- 341 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTT---EEEEE--EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETT-TTEEEEEE----
T ss_pred ECCCCccccCCCeEEEEECCCC---cEEee--ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECC-CCcEEEEe----
Confidence 432 3789999999763 33333 2456688999999999755 556 89999999998 66665552
Q ss_pred CcCcCccCceEEEEEeCCCCCEEEEEeC---------------CCeEEEEeCCCccccccccccccccccccCCcccccc
Q 015290 261 SNMDDLTEVITSAEFHPIYCNLLAYSSS---------------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTE 325 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~~~~~l~s~s~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (409)
.+...+.+++|+|++ +++++++. ||.|++||+.+++. ...+..
T Consensus 342 ----~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~----~~~~~~------------- 399 (433)
T 3bws_A 342 ----PVFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV----KEFWEA------------- 399 (433)
T ss_dssp ----ECSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE----EEEEEC-------------
T ss_pred ----cCCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEEECCCCcE----EEEecC-------------
Confidence 255678999999999 88887765 57999999988764 223332
Q ss_pred cccceeeeEeccCCCEEEEee--cCeEEEEEcc
Q 015290 326 IIASISDIKFANDGQHLLSRD--YMNLKLWDIR 356 (409)
Q Consensus 326 ~~~~i~~~~~s~~g~~l~sg~--~~~v~iwd~~ 356 (409)
...+.+++|+|+|++|++++ ++.|++|++.
T Consensus 400 -~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 400 -GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp -SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred -CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 24689999999999998764 5999999985
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.3e-23 Score=191.09 Aligned_cols=221 Identities=10% Similarity=0.039 Sum_probs=170.1
Q ss_pred ccccCCCcEEEEEECCCCCEEEEEecCC---eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcc
Q 015290 27 EELQDVDIVSAIEFDKTGDYLAVGDRGG---RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPE 103 (409)
Q Consensus 27 ~~~~h~~~v~~v~~~~~~~~la~~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 103 (409)
....|...|.+++|+|||++||+++.++ .|++||+.+++. ..+..|.
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~----------------------------~~l~~~~-- 222 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV----------------------------RQVASFP-- 222 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE----------------------------EEEECCS--
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE----------------------------EEeecCC--
Confidence 3445889999999999999999999875 999999988762 2456666
Q ss_pred ccccccceeccceEEEEEEecCCCCEEE-EEeCCC--eEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCC
Q 015290 104 FDYLKSLEIEEKINRVRWCAAPNGSMFI-LSTNDK--TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP 180 (409)
Q Consensus 104 ~~~~~~~~~~~~v~~l~~~~s~~~~~l~-s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (409)
..+.+++| +|||+.|+ +++.|+ .|++||+.+++...+
T Consensus 223 ----------~~~~~~~~--spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l---------------------------- 262 (415)
T 2hqs_A 223 ----------RHNGAPAF--SPDGSKLAFALSKTGSLNLYVMDLASGQIRQV---------------------------- 262 (415)
T ss_dssp ----------SCEEEEEE--CTTSSEEEEEECTTSSCEEEEEETTTCCEEEC----------------------------
T ss_pred ----------CcccCEEE--cCCCCEEEEEEecCCCceEEEEECCCCCEEeC----------------------------
Confidence 78999999 89999888 566655 488899887654322
Q ss_pred CCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-c-CC--eEEEEEccCCCceeeee
Q 015290 181 SFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D-DL--RINLWNLEISDQCFNIV 256 (409)
Q Consensus 181 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~-d~--~i~lwd~~~~~~~~~~~ 256 (409)
..|...+.+++|+|+|++|+++ . ++ .|++||+. .+... .
T Consensus 263 ----------------------------------~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~-~~~~~-~- 305 (415)
T 2hqs_A 263 ----------------------------------TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN-GGAPQ-R- 305 (415)
T ss_dssp ----------------------------------CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-SSCCE-E-
T ss_pred ----------------------------------cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC-CCCEE-E-
Confidence 4566778999999999988876 4 55 67777887 44332 2
Q ss_pred ecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC---CeEEEEeCCCccccccccccccccccccCCcccccccccceeee
Q 015290 257 DMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR---GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDI 333 (409)
Q Consensus 257 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 333 (409)
+..+...+.+++|+|+| ++|++++.+ ..|.+||+.+++. ..+.. + ..+.++
T Consensus 306 ------l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~~~d~~~~~~-----~~l~~-------------~-~~~~~~ 359 (415)
T 2hqs_A 306 ------ITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIAKQDLATGGV-----QVLSS-------------T-FLDETP 359 (415)
T ss_dssp ------CCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEEEEETTTCCE-----EECCC-------------S-SSCEEE
T ss_pred ------EecCCCcccCeEECCCC-CEEEEEECcCCceEEEEEECCCCCE-----EEecC-------------C-CCcCCe
Confidence 34466788999999999 888887764 5899999988753 22222 1 268899
Q ss_pred EeccCCCEEEEee-cC---eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC
Q 015290 334 KFANDGQHLLSRD-YM---NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 397 (409)
Q Consensus 334 ~~s~~g~~l~sg~-~~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 397 (409)
+|+|||++|++++ ++ .|++||+. +.....+..|...+ .+++|+|...
T Consensus 360 ~~spdg~~l~~~s~~~~~~~l~~~d~~--g~~~~~l~~~~~~v---------------~~~~~~~~~~ 410 (415)
T 2hqs_A 360 SLAPNGTMVIYSSSQGMGSVLNLVSTD--GRFKARLPATDGQV---------------KFPAWSPYLH 410 (415)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEETT--SCCEEECCCSSSEE---------------EEEEECCCCC
T ss_pred EEcCCCCEEEEEEcCCCccEEEEEECC--CCcEEEeeCCCCCC---------------cCCccccccc
Confidence 9999999998875 33 79999986 67788888887765 6999999754
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=1.4e-22 Score=189.83 Aligned_cols=287 Identities=11% Similarity=0.056 Sum_probs=192.0
Q ss_pred cEEEEEECCCCCEEEEEecCCeEEEEec--cCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 34 IVSAIEFDKTGDYLAVGDRGGRVILFET--VGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~dg~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
.+..++|+|||++|++++.|+.|.+||+ .+++ .+..+..+
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~---------------------------~~~~i~~g----------- 221 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT---------------------------KVAEIKIG----------- 221 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE---------------------------EEEEEECC-----------
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCc---------------------------EEEEEecC-----------
Confidence 3889999999999999999999999999 5543 34445533
Q ss_pred eccceEEEEEEecC----CCCEEEEEe-CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC-cee
Q 015290 112 IEEKINRVRWCAAP----NGSMFILST-NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF-AHG 185 (409)
Q Consensus 112 ~~~~v~~l~~~~s~----~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (409)
..+..++| +| +|+++++++ .+++|.+||..+++........... +....+ .....+.....+++. .++
T Consensus 222 --~~p~~va~--sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~-~~~~~~-~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 222 --IEARSVES--SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT-VDTQTY-HPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp --SEEEEEEE--CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC-SSSCCE-ESCCCEEEEEECSSSSEEE
T ss_pred --CCcceEEe--CCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc-cCcccc-ccCCceEEEEECCCCCEEE
Confidence 46899999 78 999999887 5899999999988876655421100 000000 011122333334433 333
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcC
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNM 263 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~ 263 (409)
.+. ..++.|.+||........ +.. ..+...+..++|+|++++++++ .+++|.+||.. +++++..+... .
T Consensus 296 vs~--~~~g~i~vvd~~~~~~l~-~~~--i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~-tg~l~~~i~~g---~ 366 (543)
T 1nir_A 296 VNV--KETGKVLLVNYKDIDNLT-VTS--IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK-DRRLSALVDVG---K 366 (543)
T ss_dssp EEE--TTTTEEEEEECTTSSSCE-EEE--EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT-TTEEEEEEECS---S
T ss_pred EEE--CCCCeEEEEEecCCCcce-eEE--eccCcCccCceECCCCCEEEEEecCCCeEEEEECC-CCeEEEeeccC---C
Confidence 333 347899999997643222 112 2355667889999999987755 68999999999 77777765432 1
Q ss_pred cCccCceEEEEEeCCCCCEEEEEe-CCCeEEEEeCCCcccc---ccccccccccccccCCcccccccccceeeeEeccCC
Q 015290 264 DDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQSALC---DHSARILRDAAESHGSKSFFTEIIASISDIKFANDG 339 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 339 (409)
..|.+....+ ++|++..+++++. .|++|.+||+.+.... .+.++. +..|...+..++++|+|
T Consensus 367 ~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~-------------l~~~g~~~~~v~~~pdg 432 (543)
T 1nir_A 367 TPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE-------------LQGQGGGSLFIKTHPKS 432 (543)
T ss_dssp SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE-------------EECSCSCCCCEECCTTC
T ss_pred CCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE-------------EEcCCCCceEEEcCCCC
Confidence 2354443333 5787427777775 6899999999873210 111222 33345677889999999
Q ss_pred CEEEEee--------cCeEEEEEccCCCcce-EEEe--------cccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 340 QHLLSRD--------YMNLKLWDIRMDSTPV-ATFK--------IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 340 ~~l~sg~--------~~~v~iwd~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
++|++++ +++|.+||+.+ ++.. ..+. .+... +..++|+|||+.|+++
T Consensus 433 ~~l~v~~~~~~~~~~~~~v~v~d~~~-~~~~~~~~~v~~~~~~~~~~~~---------------~~~~~~~~~g~~~~~s 496 (543)
T 1nir_A 433 SHLYVDTTFNPDARISQSVAVFDLKN-LDAKYQVLPIAEWADLGEGAKR---------------VVQPEYNKRGDEVWFS 496 (543)
T ss_dssp CEEEECCTTCSSHHHHTCEEEEETTC-TTSCCEEECHHHHHCCCSSCCE---------------EEEEEECSSSSEEEEE
T ss_pred CcEEEecCCCCCcccCceEEEEECCC-CCCCeEEeechhhcccCCCCCc---------------eEeccCCCCCCEEEEE
Confidence 9999986 47999999987 5544 5542 12222 2699999999998866
Q ss_pred c
Q 015290 403 S 403 (409)
Q Consensus 403 s 403 (409)
.
T Consensus 497 ~ 497 (543)
T 1nir_A 497 V 497 (543)
T ss_dssp E
T ss_pred e
Confidence 3
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=8.7e-23 Score=176.81 Aligned_cols=236 Identities=12% Similarity=0.121 Sum_probs=167.5
Q ss_pred cccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccC-CcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 28 ELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVG-GKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 28 ~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
...|...|.+++|+|+|++|++++ ++.|.+||+.+ ++. .....+|..
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~---------------------------~~~~~~~~~---- 84 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP---------------------------EKVDTGFAT---- 84 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC---------------------------EECCCTTCC----
T ss_pred eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc---------------------------eEecccccc----
Confidence 445788999999999999999986 78999999988 653 223334421
Q ss_pred cccceeccceEEEEEEecCCCCEEEEEe--CCCeEEEEEcC--CceeeeeeccCCCcccccccccccccCceeccCCCCC
Q 015290 107 LKSLEIEEKINRVRWCAAPNGSMFILST--NDKTIKLWKVR--DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 182 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~~l~s~~--~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (409)
..|.+++| +|++++|++++ .++..+||.+. ++....+
T Consensus 85 -------~~~~~~~~--spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~------------------------------ 125 (297)
T 2ojh_A 85 -------ICNNDHGI--SPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM------------------------------ 125 (297)
T ss_dssp -------CBCSCCEE--CTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC------------------------------
T ss_pred -------ccccceEE--CCCCCEEEEEEeCCCCcceEEEEECCCCceEEe------------------------------
Confidence 57889999 79999999998 44556666553 3321111
Q ss_pred ceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEE-Ee-cCCeEEEEEccCCCceeeeeecCC
Q 015290 183 AHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFV-SA-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
..+ ..+..++|+|+++.|+ ++ .++.+.+|+++........
T Consensus 126 --------------------------------~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~----- 167 (297)
T 2ojh_A 126 --------------------------------TKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR----- 167 (297)
T ss_dssp --------------------------------CSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE-----
T ss_pred --------------------------------ecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE-----
Confidence 112 2378899999999887 56 8999999997633333333
Q ss_pred CcCcCccCceEEEEEeCCCCCEEEEEe-CCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCC
Q 015290 261 SNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG 339 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 339 (409)
+..+...+.+++|+|++ ++|+.++ .++.+++|++...... ...+. .|...+..++|+|+|
T Consensus 168 --~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~~~~~~~---~~~~~-------------~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 168 --LTHGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIWRVRVDGSS---VERIT-------------DSAYGDWFPHPSPSG 228 (297)
T ss_dssp --CCCSSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSSC---EEECC-------------CCSEEEEEEEECTTS
T ss_pred --cccCCCccccceECCCC-CEEEEEecCCCCccEEEECCCCCC---cEEEe-------------cCCcccCCeEECCCC
Confidence 45677889999999999 7766655 5889999987532111 12222 224578899999999
Q ss_pred CEEEEee-c-----------CeEEEEEccCCCcc--eEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 340 QHLLSRD-Y-----------MNLKLWDIRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 340 ~~l~sg~-~-----------~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
++|++++ + +.|++||+.. ++. +..+.+|...+ ..++|+|||++|++++.|
T Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~---------------~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 229 DKVVFVSYDADVFDHPRDLDVRVQLMDMDG-GNVETLFDLFGGQGTM---------------NSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp SEEEEEEEETTCCSCCSSEEEEEEEEETTS-CSCEEEEEEEESTTTS---------------CSCCBCTTSSEEEEEEEC
T ss_pred CEEEEEEcCCCCCcccccCceEEEEEecCC-CCceeeeccCCCCccc---------------ccceECCCCCEEEEEEec
Confidence 9998764 3 4699999975 544 33344555544 589999999999988877
Q ss_pred CC
Q 015290 406 RD 407 (409)
Q Consensus 406 g~ 407 (409)
..
T Consensus 293 ~~ 294 (297)
T 2ojh_A 293 PV 294 (297)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2.4e-22 Score=182.60 Aligned_cols=213 Identities=14% Similarity=0.125 Sum_probs=160.4
Q ss_pred CCEEEEEecC------CeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccceE
Q 015290 44 GDYLAVGDRG------GRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKIN 117 (409)
Q Consensus 44 ~~~la~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~ 117 (409)
+..++.++.+ +.|++||+++.. ...+.+|. ..|.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~----------------------------~~~l~~~~------------~~v~ 182 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN----------------------------QFVVHRSP------------QPLM 182 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS----------------------------CEEEEEES------------SCEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC----------------------------CEEEeCCC------------Ccce
Confidence 5667766654 799999997543 34566777 7999
Q ss_pred EEEEEecCCCCEEEEEeCCC---eEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccc
Q 015290 118 RVRWCAAPNGSMFILSTNDK---TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENM 194 (409)
Q Consensus 118 ~l~~~~s~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (409)
+++| +|+|++|++++.|+ .|++||+.+++...+
T Consensus 183 ~~~~--Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l------------------------------------------ 218 (415)
T 2hqs_A 183 SPAW--SPDGSKLAYVTFESGRSALVIQTLANGAVRQV------------------------------------------ 218 (415)
T ss_dssp EEEE--CTTSSEEEEEECTTSSCEEEEEETTTCCEEEE------------------------------------------
T ss_pred eeEE--cCCCCEEEEEEecCCCcEEEEEECCCCcEEEe------------------------------------------
Confidence 9999 89999999999885 999999988755332
Q ss_pred eeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEE-Ee-cCC--eEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 195 ATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFV-SA-DDL--RINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 195 ~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~-~d~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
..|...+.+++|+|+|+.|+ ++ .++ .|++||+. .+... . +..|...+
T Consensus 219 --------------------~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~~-~-------l~~~~~~~ 269 (415)
T 2hqs_A 219 --------------------ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQIR-Q-------VTDGRSNN 269 (415)
T ss_dssp --------------------ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEE-E-------CCCCSSCE
T ss_pred --------------------ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC-CCCEE-e-------CcCCCCcc
Confidence 34566789999999999888 55 554 49999998 44442 2 56677889
Q ss_pred EEEEEeCCCCCEEEEEeC-CC--eEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-
Q 015290 271 TSAEFHPIYCNLLAYSSS-RG--FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD- 346 (409)
Q Consensus 271 ~~~~~~p~~~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~- 346 (409)
.+++|+|+| ++|++++. ++ .|.+||+.+++. ..+.. +...+..++|+|||++|++++
T Consensus 270 ~~~~~spdg-~~l~~~s~~~g~~~i~~~d~~~~~~-----~~l~~-------------~~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 270 TEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGGAP-----QRITW-------------EGSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp EEEEECTTS-SEEEEEECTTSSCEEEEEETTSSCC-----EECCC-------------SSSEEEEEEECTTSSEEEEEEE
T ss_pred cceEECCCC-CEEEEEECCCCCcEEEEEECCCCCE-----EEEec-------------CCCcccCeEECCCCCEEEEEEC
Confidence 999999999 88887775 44 677889887652 22211 135688999999999999775
Q ss_pred c---CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCC
Q 015290 347 Y---MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRR 406 (409)
Q Consensus 347 ~---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg 406 (409)
+ ..|++||+.+ ++. ..+..+. .+ .+++|+|||++|++++.|+
T Consensus 331 ~~g~~~i~~~d~~~-~~~-~~l~~~~-~~---------------~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 331 NGGQQHIAKQDLAT-GGV-QVLSSTF-LD---------------ETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp CSSCEEEEEEETTT-CCE-EECCCSS-SC---------------EEEEECTTSSEEEEEEEET
T ss_pred cCCceEEEEEECCC-CCE-EEecCCC-Cc---------------CCeEEcCCCCEEEEEEcCC
Confidence 3 5899999985 444 3444443 22 5899999999999988776
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=7.5e-22 Score=175.70 Aligned_cols=284 Identities=10% Similarity=0.058 Sum_probs=194.9
Q ss_pred CCCcEEEEEECCCCCEEEEEec-------CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDR-------GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPE 103 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 103 (409)
....+..++|+|+++++++++. ++.|.+||..+++. +..+...
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~---------------------------~~~~~~~--- 88 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV---------------------------TQAIHND--- 88 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE---------------------------EEEEEES---
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE---------------------------EEEEecC---
Confidence 4567889999999999888874 56899999987763 2333222
Q ss_pred ccccccceeccceEEEEEEecCCCCEEEE-EeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC
Q 015290 104 FDYLKSLEIEEKINRVRWCAAPNGSMFIL-STNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 182 (409)
Q Consensus 104 ~~~~~~~~~~~~v~~l~~~~s~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (409)
..+..++| ++++++++. ...++.|.+||..+++............... ........+.+++++
T Consensus 89 ----------~~~~~~~~--s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~dg 152 (353)
T 3vgz_A 89 ----------LKPFGATI--NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEE----VRPLQPRELVADDAT 152 (353)
T ss_dssp ----------SCCCSEEE--ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSS----CCCCEEEEEEEETTT
T ss_pred ----------CCcceEEE--CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccc----cCCCCCceEEECCCC
Confidence 35678899 789986655 4567999999999888766544321110000 000012233445555
Q ss_pred ceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCC
Q 015290 183 AHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPS 261 (409)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~ 261 (409)
..++.+....++.|.+||..+ .+.+..+ ..+...+.+++|+|++++++++ .++.|.+||+. .++....+...
T Consensus 153 ~~l~~~~~~~~~~i~~~d~~~---~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~-- 225 (353)
T 3vgz_A 153 NTVYISGIGKESVIWVVDGGN---IKLKTAI-QNTGKMSTGLALDSEGKRLYTTNADGELITIDTA-DNKILSRKKLL-- 225 (353)
T ss_dssp TEEEEEEESSSCEEEEEETTT---TEEEEEE-CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETT-TTEEEEEEECC--
T ss_pred CEEEEEecCCCceEEEEcCCC---CceEEEe-cCCCCccceEEECCCCCEEEEEcCCCeEEEEECC-CCeEEEEEEcC--
Confidence 555555544577899999976 3444443 3345557889999999999998 99999999998 66666554321
Q ss_pred cCcCccCceEEEEEeCCCCCEEEEEe-CCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC
Q 015290 262 NMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 340 (409)
Q Consensus 262 ~~~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 340 (409)
..++...+..++|+|++ ++++.++ .++.|.+||..+++.. ..+.. .....++|+|+|+
T Consensus 226 -~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~---------------~~~~~~~~s~dg~ 284 (353)
T 3vgz_A 226 -DDGKEHFFINISLDTAR-QRAFITDSKAAEVLVVDTRNGNIL----AKVAA---------------PESLAVLFNPARN 284 (353)
T ss_dssp -CSSSCCCEEEEEEETTT-TEEEEEESSSSEEEEEETTTCCEE----EEEEC---------------SSCCCEEEETTTT
T ss_pred -CCCCCcccceEEECCCC-CEEEEEeCCCCEEEEEECCCCcEE----EEEEc---------------CCCceEEECCCCC
Confidence 12345678899999999 7555554 5599999999887641 22222 1125699999999
Q ss_pred EEEEee--cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 341 HLLSRD--YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 341 ~l~sg~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
+++.++ ++.|.+||..+ ++.+..+...... .+++|+|||++|+.+..+
T Consensus 285 ~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~----------------~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 285 EAYVTHRQAGKVSVIDAKS-YKVVKTFDTPTHP----------------NSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEETTTTEEEEEETTT-TEEEEEEECCSEE----------------EEEEECTTSCEEEEEEEC
T ss_pred EEEEEECCCCeEEEEECCC-CeEEEEEecCCCC----------------CeEEEcCCCCEEEEEEcc
Confidence 766554 49999999986 7777777655443 589999999977766655
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.5e-22 Score=198.37 Aligned_cols=287 Identities=10% Similarity=0.078 Sum_probs=187.4
Q ss_pred CCcEEEEEECCCCCEEEEEec-CC-----eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcc--
Q 015290 32 VDIVSAIEFDKTGDYLAVGDR-GG-----RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPE-- 103 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~-dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-- 103 (409)
...|.+++|+|||++||+++. |+ .|.+||+.+++.. ..+..+...
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~---------------------------~~~~~~~~~~~ 88 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR---------------------------LLVDSKVVLPG 88 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE---------------------------EEECGGGTC--
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee---------------------------Eccchhhcccc
Confidence 457999999999999999998 88 8999999887631 111111100
Q ss_pred ----------ccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCc---eeeeeeccCCCcccccccccccc
Q 015290 104 ----------FDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQ---KVKKIKEMDHFPFVSSENTLLAE 170 (409)
Q Consensus 104 ----------~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 170 (409)
......+.....|.+++| +|||++|++++. +.|++||+.++ ....+.. ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~--SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~--------------~~ 151 (741)
T 2ecf_A 89 TETLSDEEKARRERQRIAAMTGIVDYQW--SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH--------------GE 151 (741)
T ss_dssp ------------------CCEESCCCEE--CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC--------------SS
T ss_pred cccccchhhhhhhhhhhccccCcceeEE--CCCCCEEEEEeC-CcEEEEECCCCCcceEEEccc--------------CC
Confidence 000000000024788999 899999999987 99999999887 4433221 12
Q ss_pred cCceeccCCCCCceeecccccccceeEEEecCCcccceeeeeecccccc----------------ceeEEEeCCCCCeEE
Q 015290 171 KNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDF----------------NINSISNNSDCETFV 234 (409)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------------~v~~l~~~~~~~~l~ 234 (409)
.......+++++..++.+. ++.|++|++.+. +..+.. ..+.. .+..++|+|||++|+
T Consensus 152 ~~~~~~~~SPDG~~la~~~---~~~i~~~d~~~g---~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~ 224 (741)
T 2ecf_A 152 GFATDAKLSPKGGFVSFIR---GRNLWVIDLASG---RQMQLT-ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIA 224 (741)
T ss_dssp SCEEEEEECTTSSEEEEEE---TTEEEEEETTTT---EEEECC-CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEE
T ss_pred cccccccCCCCCCEEEEEe---CCcEEEEecCCC---CEEEec-cCCccceeccccceeeeeccccccceEECCCCCEEE
Confidence 3345566778888777765 568999999763 222222 22222 147799999999999
Q ss_pred Ee-cCC---------------------------------eEEEEEccCC-CceeeeeecCCCcCcCccCceEEEEEeCCC
Q 015290 235 SA-DDL---------------------------------RINLWNLEIS-DQCFNIVDMKPSNMDDLTEVITSAEFHPIY 279 (409)
Q Consensus 235 ~~-~d~---------------------------------~i~lwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 279 (409)
++ .|+ .|.+||+. . +...... . ...|...+..++| |+|
T Consensus 225 ~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~~~~-~----~~~~~~~~~~~~~-pDg 297 (741)
T 2ecf_A 225 YARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA-EQAQTQWID-L----GKEQDIYLARVNW-RDP 297 (741)
T ss_dssp EEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS-TTCCCEEEC-C----CSCSSEEEEEEEE-EET
T ss_pred EEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC-CCCceEEec-C----CCCcceEEEEEEe-CCC
Confidence 87 655 78888987 4 4443321 0 1247778999999 999
Q ss_pred CCEEEEEeC-----CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEE
Q 015290 280 CNLLAYSSS-----RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLW 353 (409)
Q Consensus 280 ~~~l~s~s~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iw 353 (409)
++|++++. +..|.+||+.+++.. ..+..+.. .....+..++|+|||+++++++. +.++||
T Consensus 298 -~~l~~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~~~~---------~~~~~~~~~~~spdg~~~~~~~~~g~~~l~ 363 (741)
T 2ecf_A 298 -QHLSFQRQSRDQKKLDLVEVTLASNQQR----VLAHETSP---------TWVPLHNSLRFLDDGSILWSSERTGFQHLY 363 (741)
T ss_dssp -TEEEEEEEETTSSEEEEEEEETTTCCEE----EEEEEECS---------SCCCCCSCCEECTTSCEEEEECTTSSCEEE
T ss_pred -CEEEEEEecccCCeEEEEEEECCCCceE----EEEEcCCC---------CcCCcCCceEECCCCeEEEEecCCCccEEE
Confidence 88886653 568999999887631 22222100 00013568999999998888764 777777
Q ss_pred EccCCCcceEEEecccCcccccccccCCCCccceeeE-EEcCCCCeEEE-cccCC
Q 015290 354 DIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFEC-SVSGDGLHFAT-GSYRR 406 (409)
Q Consensus 354 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~spdg~~l~s-~s~dg 406 (409)
.+...++ ...+..+...+ ..+ +|+|||+.|+. ++.|+
T Consensus 364 ~~~~~~~-~~~l~~~~~~v---------------~~~~~~s~dg~~l~~~~~~~~ 402 (741)
T 2ecf_A 364 RIDSKGK-AAALTHGNWSV---------------DELLAVDEKAGLAYFRAGIES 402 (741)
T ss_dssp EECSSSC-EEESCCSSSCE---------------EEEEEEETTTTEEEEEECSSC
T ss_pred EEcCCCC-eeeeeecceEE---------------EeEeEEeCCCCEEEEEEeCCC
Confidence 7654355 66666555433 355 69999987754 44443
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=9.7e-21 Score=167.01 Aligned_cols=278 Identities=8% Similarity=0.048 Sum_probs=174.2
Q ss_pred EEECCCCCE-EEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccce
Q 015290 38 IEFDKTGDY-LAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKI 116 (409)
Q Consensus 38 v~~~~~~~~-la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v 116 (409)
..|.+++.+ +++++.++.|.+||..+++. ...+..+. ..+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~---------------------------~~~~~~~~------------~~~ 43 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEI---------------------------LNQITLGY------------DFV 43 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCE---------------------------EEEEECCC------------CEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccce---------------------------eeeEEccC------------Ccc
Confidence 346665554 67788899999999988763 33333333 456
Q ss_pred EEEEEEecCCCCEEEEEeC-CCeEEEEEcCCcee-eeeeccCCCcccccccccccccCcee-ccCCCCCceeeccccccc
Q 015290 117 NRVRWCAAPNGSMFILSTN-DKTIKLWKVRDQKV-KKIKEMDHFPFVSSENTLLAEKNFMN-EHNPPSFAHGYHLEWTEN 193 (409)
Q Consensus 117 ~~l~~~~s~~~~~l~s~~~-d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 193 (409)
.++| +|+++++++++. ++.|.+||+.+++. ....... ..... ..+++++.+++ .....+
T Consensus 44 -~~~~--s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~s~dg~~l~-~~~~~~ 105 (331)
T 3u4y_A 44 -DTAI--TSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG--------------QSSMADVDITPDDQFAV-TVTGLN 105 (331)
T ss_dssp -EEEE--CSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC--------------SSCCCCEEECTTSSEEE-ECCCSS
T ss_pred -eEEE--cCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC--------------CCCccceEECCCCCEEE-EecCCC
Confidence 9999 799997776655 88999999998875 3332211 12222 44556666666 332222
Q ss_pred c--eeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe--cCCe-EEEEEccCCCceeeeeecCCCcCcCccC
Q 015290 194 M--ATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDLR-INLWNLEISDQCFNIVDMKPSNMDDLTE 268 (409)
Q Consensus 194 ~--~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~--~d~~-i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 268 (409)
+ .|.+||+++. +.+..+ . ....+.+++|+|+|++++++ .++. |.+|++...+.....- .. ......
T Consensus 106 ~~~~i~v~d~~~~---~~~~~~-~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~---~~~~~~ 176 (331)
T 3u4y_A 106 HPFNMQSYSFLKN---KFISTI-P-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QE---FISGGT 176 (331)
T ss_dssp SSCEEEEEETTTT---EEEEEE-E-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EE---EECSSS
T ss_pred CcccEEEEECCCC---CeEEEE-E-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-Cc---cccCCC
Confidence 3 8999999763 334433 2 33456899999999866654 5677 9999998433322110 00 112334
Q ss_pred ceEEEEEeCCCCCE-EEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-
Q 015290 269 VITSAEFHPIYCNL-LAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD- 346 (409)
Q Consensus 269 ~v~~~~~~p~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~- 346 (409)
.+..++|+|+| ++ ++++..++.|.+||+.+++.. .....+.. ...+..++|+|||++|+.++
T Consensus 177 ~~~~~~~spdg-~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~--------------~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 177 RPFNITFTPDG-NFAFVANLIGNSIGILETQNPENI-TLLNAVGT--------------NNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp SEEEEEECTTS-SEEEEEETTTTEEEEEECSSTTSC-EEEEEEEC--------------SSCCCCEEECTTSSEEEEECS
T ss_pred CccceEECCCC-CEEEEEeCCCCeEEEEECCCCccc-ceeeeccC--------------CCCCceEEECCCCCEEEEEEc
Confidence 57899999999 74 555567899999999876531 00122222 24678899999999877654
Q ss_pred -cCeEEEEEccCCCcc--eEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCC
Q 015290 347 -YMNLKLWDIRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRR 406 (409)
Q Consensus 347 -~~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg 406 (409)
++.|.+||+.+ ++. +..+..+.... .........++|+|||++|++++.++
T Consensus 241 ~~~~i~~~d~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 241 STVDVFNFNQLS-GTLSFVKSFGHGLLID--------PRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp SEEEEEEEETTT-TEEEEEEEEECCCCCC--------CGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred CCCEEEEEECCC-CceeeecccccccccC--------CCCcccccceEECCCCCEEEEecCCC
Confidence 38899999975 555 44433321000 00111113589999999887655543
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=3.3e-21 Score=180.50 Aligned_cols=268 Identities=9% Similarity=0.086 Sum_probs=187.0
Q ss_pred EECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccceEE
Q 015290 39 EFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKINR 118 (409)
Q Consensus 39 ~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~ 118 (409)
+|+|++.++++++.|++|.+||..+++ ++..+..+. .+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~---------------------------~~~~i~~g~-------------~~~~ 183 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK---------------------------IVKVIDTGY-------------AVHI 183 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC---------------------------EEEEEECST-------------TEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce---------------------------EEEEEecCc-------------ccce
Confidence 389999999999999999999998776 345555443 3788
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEEc--CCceeeeeeccCCCcccccccccccccCceeccCCC----CCceeecccccc
Q 015290 119 VRWCAAPNGSMFILSTNDKTIKLWKV--RDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP----SFAHGYHLEWTE 192 (409)
Q Consensus 119 l~~~~s~~~~~l~s~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 192 (409)
++| +|+|++|++++.|++|++||+ .+++....... ......+.+++ ++.+++.+.. .
T Consensus 184 v~~--spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~--------------g~~p~~va~sp~~~~dg~~l~v~~~-~ 246 (543)
T 1nir_A 184 SRM--SASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI--------------GIEARSVESSKFKGYEDRYTIAGAY-W 246 (543)
T ss_dssp EEE--CTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC--------------CSEEEEEEECCSTTCTTTEEEEEEE-E
T ss_pred EEE--CCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec--------------CCCcceEEeCCCcCCCCCEEEEEEc-c
Confidence 999 899999999999999999999 67665544331 12233444555 6666666542 2
Q ss_pred cceeEEEecCCcccceeeeeecc-c--------c-ccceeEEEeCCCCCeEEE-e-cCCeEEEEEccCCCceeeeeecCC
Q 015290 193 NMATKIANVGNSVHARCQKVYPH-A--------H-DFNINSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~-~--------~-~~~v~~l~~~~~~~~l~~-~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
+++|.+||..+. ++++.+.. + | ...+..+.++|++..++. . .++.|.+||+. ....+....
T Consensus 247 ~~~v~v~D~~t~---~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~-~~~~l~~~~--- 319 (543)
T 1nir_A 247 PPQFAIMDGETL---EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK-DIDNLTVTS--- 319 (543)
T ss_dssp SSEEEEEETTTC---CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECT-TSSSCEEEE---
T ss_pred CCeEEEEecccc---ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEec-CCCcceeEE---
Confidence 678999998763 34333311 1 2 236889999998766654 5 89999999998 433333110
Q ss_pred CcCcCccCceEEEEEeCCCCCEEE-EEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccC-
Q 015290 261 SNMDDLTEVITSAEFHPIYCNLLA-YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND- 338 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~- 338 (409)
+ .+...+..+.|+|+| ++|+ ++..+++|.+||..++++. ..+.. .. ..|......+ ++|+
T Consensus 320 --i-~~~~~~~~~~~spdg-~~l~va~~~~~~v~v~D~~tg~l~----~~i~~-g~--------~ph~g~g~~~-~~p~~ 381 (543)
T 1nir_A 320 --I-GAAPFLHDGGWDSSH-RYFMTAANNSNKVAVIDSKDRRLS----ALVDV-GK--------TPHPGRGANF-VHPKY 381 (543)
T ss_dssp --E-ECCSSCCCEEECTTS-CEEEEEEGGGTEEEEEETTTTEEE----EEEEC-SS--------SBCCTTCEEE-EETTT
T ss_pred --e-ccCcCccCceECCCC-CEEEEEecCCCeEEEEECCCCeEE----Eeecc-CC--------CCCCCCCccc-CCCCC
Confidence 1 244567889999999 7655 4556899999999998642 22322 00 1122222222 4777
Q ss_pred CCEEEEee--cCeEEEEEccCC------CcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 339 GQHLLSRD--YMNLKLWDIRMD------STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 339 g~~l~sg~--~~~v~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
|.+++++. +++|.+||+.+. .++++++.+|.... ..++++|||++|++++
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~---------------~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS---------------LFIKTHPKSSHLYVDT 439 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC---------------CCEECCTTCCEEEECC
T ss_pred ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCc---------------eEEEcCCCCCcEEEec
Confidence 66777764 499999999752 57889999887654 4799999999999987
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=1.4e-20 Score=166.62 Aligned_cols=281 Identities=12% Similarity=0.145 Sum_probs=175.0
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecC-CeEEEEecc--CCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRG-GRVILFETV--GGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFD 105 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~d-g~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 105 (409)
..|...+.+++|+|+|++|++++.+ +.|.+|++. ++.. +.+..+..+
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-------------------------~~~~~~~~~----- 83 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-------------------------TFAAESALP----- 83 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-------------------------EEEEEEECS-----
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce-------------------------eeccccccC-----
Confidence 4467789999999999999988876 999999997 3331 123333332
Q ss_pred ccccceeccceEEEEEEecCCCCEEEEEeC-CCeEEEEEcCCc---eeeeeeccCCCcccccccccccccCceeccCCCC
Q 015290 106 YLKSLEIEEKINRVRWCAAPNGSMFILSTN-DKTIKLWKVRDQ---KVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPS 181 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~-d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (409)
..+..++| +|++++|++++. ++.|.+||+..+ ....... .......+.++++
T Consensus 84 --------~~~~~~~~--s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~s~d 139 (343)
T 1ri6_A 84 --------GSLTHIST--DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--------------GLDGCHSANISPD 139 (343)
T ss_dssp --------SCCSEEEE--CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--------------CCTTBCCCEECTT
T ss_pred --------CCCcEEEE--cCCCCEEEEEecCCCeEEEEECCCCcccccccccc--------------CCCCceEEEECCC
Confidence 36789999 799998877664 889999999533 2222211 1112233344555
Q ss_pred CceeecccccccceeEEEecCCcccceeee--eeccccccceeEEEeCCCCCeEEE-e-cCCeEEEEEccC-CCce--ee
Q 015290 182 FAHGYHLEWTENMATKIANVGNSVHARCQK--VYPHAHDFNINSISNNSDCETFVS-A-DDLRINLWNLEI-SDQC--FN 254 (409)
Q Consensus 182 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~~-~-~d~~i~lwd~~~-~~~~--~~ 254 (409)
+..++.+. ..++.+.+|++.......... .........+..++|+|+++++++ + .++.|.+|++.. .+.. ..
T Consensus 140 g~~l~~~~-~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~ 218 (343)
T 1ri6_A 140 NRTLWVPA-LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQ 218 (343)
T ss_dssp SSEEEEEE-GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEE
T ss_pred CCEEEEec-CCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEe
Confidence 55554433 136789999997622222111 121233457889999999997754 5 789999999962 2222 22
Q ss_pred eeecCCCcCcCccCceEEEEEeCCCCCEEE-EEeCCCeEEEEeCCC--ccccccccccccccccccCCccccccccccee
Q 015290 255 IVDMKPSNMDDLTEVITSAEFHPIYCNLLA-YSSSRGFVRLVDMRQ--SALCDHSARILRDAAESHGSKSFFTEIIASIS 331 (409)
Q Consensus 255 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~s~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 331 (409)
.+...+.. ......+..++|+|++ ++|+ ++..++.|.+||+.. +.. .....+.. ...+.
T Consensus 219 ~~~~~~~~-~~~~~~~~~i~~s~dg-~~l~v~~~~~~~i~v~d~~~~~~~~--~~~~~~~~--------------~~~~~ 280 (343)
T 1ri6_A 219 TLDMMPEN-FSDTRWAADIHITPDG-RHLYACDRTASLITVFSVSEDGSVL--SKEGFQPT--------------ETQPR 280 (343)
T ss_dssp EEECSCTT-CCSCCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCCE--EEEEEEEC--------------SSSCC
T ss_pred eccccCcc-ccccCCccceEECCCC-CEEEEEecCCCEEEEEEEcCCCCce--EEeeeecC--------------CCccc
Confidence 21111000 0113467789999999 6665 556799999999983 221 11111221 12378
Q ss_pred eeEeccCCCEEEEee-c-CeEEEEEccCC-C--cceEEEecccCcccccccccCCCCccceeeEEEcCCCCe
Q 015290 332 DIKFANDGQHLLSRD-Y-MNLKLWDIRMD-S--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLH 398 (409)
Q Consensus 332 ~~~~s~~g~~l~sg~-~-~~v~iwd~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 398 (409)
.++|+|+|++|++++ + +.|.+|+++.. + +.+..+.....+ .+++|.|+.+.
T Consensus 281 ~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p----------------~~i~~~~~~~~ 336 (343)
T 1ri6_A 281 GFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGP----------------MWVVVNAHEGG 336 (343)
T ss_dssp CEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSC----------------CEEEEEEEC--
T ss_pred eEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCC----------------eeEEEEcccCC
Confidence 899999999888875 4 99999966521 3 234444443333 48888887553
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=6.4e-22 Score=193.27 Aligned_cols=282 Identities=10% Similarity=0.011 Sum_probs=180.1
Q ss_pred cEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceec
Q 015290 34 IVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIE 113 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 113 (409)
.+.+++|+|||+++++ +.||.|++||+.+++. ...+.+|... .
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~---------------------------~~~~~~~~~~---------~ 60 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS---------------------------TVLIEGKKIE---------S 60 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC---------------------------EEEECTTTTT---------T
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcE---------------------------EEEecccccc---------c
Confidence 4678999999998876 6899999999998763 3344555410 0
Q ss_pred cceEEEEEEecCCCCEEEEEeCC---------CeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 114 EKINRVRWCAAPNGSMFILSTND---------KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
..|.+++| ||||++|++++.+ +.+.+||+.+++...+.... .....+....+++++..
T Consensus 61 ~~v~~~~~--SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-----------~~~~~~~~~~~SPdG~~ 127 (723)
T 1xfd_A 61 LRAIRYEI--SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE-----------VSNAKLQYAGWGPKGQQ 127 (723)
T ss_dssp TTCSEEEE--CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT-----------CCSCCCSBCCBCSSTTC
T ss_pred cccceEEE--CCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc-----------cccccccccEECCCCCE
Confidence 14899999 8999999999764 78889999988763332110 01112445667778877
Q ss_pred eecccccccceeEEEecCCcccceeeeeecccccc------------------ceeEEEeCCCCCeEEEe-cCC------
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDF------------------NINSISNNSDCETFVSA-DDL------ 239 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~l~~~~~~~~l~~~-~d~------ 239 (409)
++.+. ++.|++|++.+.. ..+.. ..+.. .+.+++|+|||+.|+++ .++
T Consensus 128 la~~~---~~~i~~~~~~~g~---~~~~~-~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~ 200 (723)
T 1xfd_A 128 LIFIF---ENNIYYCAHVGKQ---AIRVV-STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIM 200 (723)
T ss_dssp EEEEE---TTEEEEESSSSSC---CEEEE-CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEE
T ss_pred EEEEE---CCeEEEEECCCCc---eEEEe-cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceE
Confidence 77766 3689999997633 33322 22222 23789999999999987 443
Q ss_pred ----------------------------eEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC---
Q 015290 240 ----------------------------RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS--- 288 (409)
Q Consensus 240 ----------------------------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~--- 288 (409)
.|++||+. .+.....+... .....+...+.+++|+||| +++++.+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~ 277 (723)
T 1xfd_A 201 ELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN-GPTHDLEMMPP-DDPRMREYYITMVKWATST-KVAVTWLNRAQ 277 (723)
T ss_dssp EECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS-SSCCCEECCCC-CCGGGSSEEEEEEEESSSS-EEEEEEEETTS
T ss_pred EeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC-CCceeEEeeCC-ccCCCccceeEEEEEeCCC-eEEEEEEcCCC
Confidence 78888887 44432332100 0112236678999999999 88876643
Q ss_pred -CCeEEEEeCCCccccccccccccccccccCCcccccccccce----eeeEeccCCCEEEEe-e-c-C------eEEEEE
Q 015290 289 -RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI----SDIKFANDGQHLLSR-D-Y-M------NLKLWD 354 (409)
Q Consensus 289 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~s~~g~~l~sg-~-~-~------~v~iwd 354 (409)
+..|.+||+.+++.. ..+..+ +...+ ..++|+|||+.|+.. + . + .|++||
T Consensus 278 ~~~~i~~~d~~~g~~~----~~~~~~------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 278 NVSILTLCDATTGVCT----KKHEDE------------SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CEEEEEEEETTTCCEE----EEEEEE------------CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CeEEEEEEeCCCCcce----EEEEec------------cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 357999999887631 222220 01223 378999999977754 3 2 6 567777
Q ss_pred ccCCCcc--eEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 355 IRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 355 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
+...+.. ...+..+...+. ..++|+|||+.|+..+.+
T Consensus 342 ~~~~~~~~~~~~l~~~~~~~~--------------~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 342 SQPNSSNDNIQSITSGDWDVT--------------KILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp SSCCSSSCCCCBSCCSSSCEE--------------EEEEEETTTTEEEEEESS
T ss_pred ccCCCCccceeEeecCCeEEE--------------eeeEEcCCCCEEEEEEcC
Confidence 3222331 333332221110 136999999999866554
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=4.9e-22 Score=181.19 Aligned_cols=229 Identities=10% Similarity=-0.012 Sum_probs=152.7
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...++.+++++++.++++++.++ ++||+..........+. ....+... .....+.
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~-----------------~~~~~~~~-------~~~~~~~ 90 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGD-----------------DPNKIVDK-------VQGLLVP 90 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTC-----------------CTTCEEEC-------CCCEEEC
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhccccc-----------------Cccccccc-------Ccccccc
Confidence 45689999999999999999887 89988653211000000 00000000 0011122
Q ss_pred eccceEEEEEEecCCCCEEE----EEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 112 IEEKINRVRWCAAPNGSMFI----LSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~----s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
+...|.+++| ++++++|+ +++.|++|++||+.++....... ..
T Consensus 91 ~~~~v~~l~~--spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~---~~---------------------------- 137 (434)
T 2oit_A 91 MKFPIHHLAL--SCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQ---KR---------------------------- 137 (434)
T ss_dssp CSSCEEEEEE--CTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSS---CC----------------------------
T ss_pred CCCcccEEEE--cCCCCEEEEEEeccCCCceEEEEEccccccCCcCC---cc----------------------------
Confidence 2378999999 79999999 78889999999987541100000 00
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC-CCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcC
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD-CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 265 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 265 (409)
. ...... +.+|...|.+++|+|+ +.+|+++ .||+|++||++ .+..... ..+
T Consensus 138 -------~-----------~~~~~~-~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~-~~~~~~~-------~~~ 190 (434)
T 2oit_A 138 -------P-----------FAYHKL-LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT-ETVKVCA-------TLP 190 (434)
T ss_dssp -------C-----------SEEEEC-CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEES-SSEEEEE-------EEC
T ss_pred -------e-----------eeeeec-cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcC-CCcceee-------ccC
Confidence 0 001111 2679999999999998 7889999 99999999999 4443322 355
Q ss_pred ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 266 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
|...|++++|+|+| ++|++|+.||.|++||++ ++.. ..+..|.. .-..|...+.+++|++++.++++.
T Consensus 191 ~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~-~~~~----~~~~~~~~------~~~~~~~~v~~v~w~~~~~~l~~~ 258 (434)
T 2oit_A 191 STVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT-LQEK----KVIPCPPF------YESDHPVRVLDVLWIGTYVFAIVY 258 (434)
T ss_dssp GGGCEEEEEECTTS-SCEEEEETTSCEEEECTT-CCEE----EEECCCTT------CCTTSCEEEEEEEEEETTEEEEEE
T ss_pred CCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC-Cccc----ccccCCcc------cCCCCceeEEEEEEecCceEEEEE
Confidence 88899999999999 999999999999999998 3221 22222100 001234589999999999888654
Q ss_pred e--cC------eEEEEEccC
Q 015290 346 D--YM------NLKLWDIRM 357 (409)
Q Consensus 346 ~--~~------~v~iwd~~~ 357 (409)
+ +| .+++|++++
T Consensus 259 ~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 259 AAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EETTCCSSSCCEEEEEECCC
T ss_pred ccCCCccCCCCceEEEEecc
Confidence 3 22 399999975
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.1e-20 Score=165.50 Aligned_cols=248 Identities=10% Similarity=0.071 Sum_probs=155.4
Q ss_pred cceEEEEEEecCCCCEEEEEeCC-CeEEEEEcC--CceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTND-KTIKLWKVR--DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d-~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
..+.+++| +|++++|++++.+ +.|++|++. ++.......... ......+.+++++..++.+..
T Consensus 38 ~~~~~~~~--spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 38 GQVQPMVV--SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL------------PGSLTHISTDHQGQFVFVGSY 103 (343)
T ss_dssp SCCCCEEE--CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC------------SSCCSEEEECTTSSEEEEEET
T ss_pred CCCceEEE--CCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc------------CCCCcEEEEcCCCCEEEEEec
Confidence 67889999 7999999988876 999999997 555443322111 112233344555555443332
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeee--ecCCCcCcCc
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIV--DMKPSNMDDL 266 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~--~~~~~~~~~~ 266 (409)
.++.+.+|++...........+ . ....+.+++|+|++++++++ .++.|.+||+...+...... .. ....
T Consensus 104 -~~~~i~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~----~~~~ 176 (343)
T 1ri6_A 104 -NAGNVSVTRLEDGLPVGVVDVV-E-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEV----TTVE 176 (343)
T ss_dssp -TTTEEEEEEEETTEEEEEEEEE-C-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEE----ECST
T ss_pred -CCCeEEEEECCCCccccccccc-c-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccc----ccCC
Confidence 2678999999533333444443 3 33458899999999877765 79999999998324432211 00 1112
Q ss_pred cCceEEEEEeCCCCCEEE-EEeCCCeEEEEeCCC--ccccccccccccccccccCCcccccccccceeeeEeccCCCEEE
Q 015290 267 TEVITSAEFHPIYCNLLA-YSSSRGFVRLVDMRQ--SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 343 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~-s~s~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 343 (409)
...+..++|+|++ ++++ ++..++.|.+||+.. ++.. ....... .+.. ......+..++|+|+|++|+
T Consensus 177 ~~~~~~~~~~pdg-~~l~~~~~~~~~i~~~~~~~~~g~~~--~~~~~~~---~~~~----~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 177 GAGPRHMVFHPNE-QYAYCVNELNSSVDVWELKDPHGNIE--CVQTLDM---MPEN----FSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp TCCEEEEEECTTS-SEEEEEETTTTEEEEEESSCTTSCCE--EEEEEEC---SCTT----CCSCCCEEEEEECTTSSEEE
T ss_pred CCCcceEEECCCC-CEEEEEeCCCCEEEEEEecCCCCcEE--EEeeccc---cCcc----ccccCCccceEECCCCCEEE
Confidence 3467899999999 7554 555889999999954 3210 0011110 0000 00123566899999999887
Q ss_pred Eee--cCeEEEEEccCC---CcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc-cCCCC
Q 015290 344 SRD--YMNLKLWDIRMD---STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YRRDN 408 (409)
Q Consensus 344 sg~--~~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s-~dg~i 408 (409)
++. ++.|++||+... .+.+..+..+... ..++|+|||++|++++ .|+.|
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~----------------~~~~~s~dg~~l~~~~~~~~~v 301 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPTETQP----------------RGFNVDHSGKYLIAAGQKSHHI 301 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEECSSSC----------------CCEEECTTSSEEEEECTTTCEE
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecCCCcc----------------ceEEECCCCCEEEEecCCCCeE
Confidence 543 499999999731 2334444443332 4899999999888776 45543
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=5e-21 Score=170.09 Aligned_cols=257 Identities=11% Similarity=0.107 Sum_probs=162.0
Q ss_pred cCCCcEEEEEECCCCCEEEEEec---CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDR---GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
.+...+..++|+|||+ |++++. ++.|.+|++.++.. +.+..+..+.
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~-------------------------~~~~~~~~~~----- 85 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA-------------------------HKLNTVVAPG----- 85 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE-------------------------EEEEEEEEES-----
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE-------------------------EEeeeeecCC-----
Confidence 3456678899999999 555544 68999999976542 2333334444
Q ss_pred cccceeccceEEEEEEecCCCCEEEEEe-CCCeEEEEEcC-CceeeeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 107 LKSLEIEEKINRVRWCAAPNGSMFILST-NDKTIKLWKVR-DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~~l~s~~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
..+..++| +|+|++|++++ .++.|.+|++. ++............
T Consensus 86 -------~~p~~~a~--spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~------------------------- 131 (347)
T 3hfq_A 86 -------TPPAYVAV--DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSG------------------------- 131 (347)
T ss_dssp -------CCCSEEEE--ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCC-------------------------
T ss_pred -------CCCEEEEE--CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCC-------------------------
Confidence 67889999 79999888887 78999999995 33322221100000
Q ss_pred eecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcC
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM 263 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 263 (409)
..+. ...+...+.+++|+|+++.+++. .++.|.+|++...+.........
T Consensus 132 ----------------------~~p~---~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~---- 182 (347)
T 3hfq_A 132 ----------------------HGPR---PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT---- 182 (347)
T ss_dssp ----------------------CCSS---TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE----
T ss_pred ----------------------CCCC---ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE----
Confidence 0000 01234467899999999966666 78999999998334322211000
Q ss_pred cCccCceEEEEEeCCCCCEE-EEEeCCCeEEEEeCCC--ccccccccccccccccccCCcccccccccceeeeEeccCCC
Q 015290 264 DDLTEVITSAEFHPIYCNLL-AYSSSRGFVRLVDMRQ--SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 340 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~l-~s~s~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 340 (409)
......+..++|+|+| +++ ++...++.|.+|++.. ++.. ....+...... +. ....+..++|+|||+
T Consensus 183 ~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~--~~~~~~~~~~~------~~-~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 183 MEAGFGPRHLVFSPDG-QYAFLAGELSSQIASLKYDTQTGAFT--QLGIVKTIPAD------YT-AHNGAAAIRLSHDGH 252 (347)
T ss_dssp CCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEEETTTTEEE--EEEEEESSCTT------CC-SCCEEEEEEECTTSC
T ss_pred cCCCCCCceEEECCCC-CEEEEEeCCCCEEEEEEecCCCCceE--EeeeeeecCCC------CC-CCCcceeEEECCCCC
Confidence 1122357789999999 754 4466789999999874 3311 01111110000 00 013578899999999
Q ss_pred EEEEe-e-cCeEEEEEccCCC--cceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 341 HLLSR-D-YMNLKLWDIRMDS--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 341 ~l~sg-~-~~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
+|+++ . ++.|.+|++...+ +.+..+..+.... ..++|+|||++|++++.+
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~---------------~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFP---------------RDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCC---------------CEEEECTTSSEEEEEETT
T ss_pred EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCc---------------CeEEECCCCCEEEEEEcC
Confidence 88654 4 4999999996423 3344444433322 589999999998887755
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=5.3e-21 Score=181.95 Aligned_cols=260 Identities=11% Similarity=0.037 Sum_probs=171.1
Q ss_pred CCcEEEEEECCCCCEEEEEec-CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 32 VDIVSAIEFDKTGDYLAVGDR-GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
..+|++++|+|||++||+++. ||+++||++++++. ..+..|..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~----------------------------~~lt~~~~-------- 64 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET----------------------------VKLNREPI-------- 64 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE----------------------------EECCSSCC--------
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc----------------------------Eeeecccc--------
Confidence 567999999999999999887 99999999866542 23333330
Q ss_pred eeccceEEEEEEecCCCCEEEEEeC---CCeEEEEEcCC---ceeeeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTN---DKTIKLWKVRD---QKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~---d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
..+..++| +|| +.+++++. +...++|.+.. +........ . .........++....
T Consensus 65 ---~~~~~~~~--spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~---~----------~~~~~~~s~dg~~~~ 125 (582)
T 3o4h_A 65 ---NSVLDPHY--GVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV---K----------PMRILSGVDTGEAVV 125 (582)
T ss_dssp ---SEECEECT--TCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTS---C----------SBEEEEEEECSSCEE
T ss_pred ---cccccccC--CCC-eEEEEeccCCCCcceEEEEEeccCCCccccccCC---C----------CceeeeeCCCCCeEE
Confidence 47899999 788 67777765 55566765543 222211110 0 000111111122222
Q ss_pred eecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC----CeEEEEEccCCCceeeeeecC
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD----LRINLWNLEISDQCFNIVDMK 259 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d----~~i~lwd~~~~~~~~~~~~~~ 259 (409)
+..+. ++.+.+||+++. ++.+.. . +.. .+++|+|||++++++ .+ +.|++||+. +++.. .
T Consensus 126 ~~s~~---~~~~~l~d~~~g---~~~~l~-~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~-~g~~~-~---- 189 (582)
T 3o4h_A 126 FTGAT---EDRVALYALDGG---GLRELA-R-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS-SGGLR-V---- 189 (582)
T ss_dssp EEEEC---SSCEEEEEEETT---EEEEEE-E-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETT-TCCCE-E----
T ss_pred EEecC---CCCceEEEccCC---cEEEee-c-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCC-CCCce-E----
Confidence 22222 334459998763 332322 2 222 789999999999976 55 789999988 45443 2
Q ss_pred CCcCcCccCceEEEEEeCCCCCEEEEEeCCC--eEEEEeCCCccccccccccccccccccCCcccccccccceeeeE---
Q 015290 260 PSNMDDLTEVITSAEFHPIYCNLLAYSSSRG--FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIK--- 334 (409)
Q Consensus 260 ~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--- 334 (409)
+..|...+..++|+||| +.|+++..++ .|++||+.+++. ..+.. |...+..++
T Consensus 190 ---l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~d~~~~~~-----~~~~~-------------~~~~~~~~~~~~ 247 (582)
T 3o4h_A 190 ---FDSGEGSFSSASISPGM-KVTAGLETAREARLVTVDPRDGSV-----EDLEL-------------PSKDFSSYRPTA 247 (582)
T ss_dssp ---ECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEECTTTCCE-----EECCC-------------SCSHHHHHCCSE
T ss_pred ---eecCCCccccceECCCC-CEEEEccCCCeeEEEEEcCCCCcE-----EEccC-------------CCcChhhhhhcc
Confidence 46677889999999999 9999888888 899999988763 22222 233455556
Q ss_pred -----eccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCC
Q 015290 335 -----FANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRR 406 (409)
Q Consensus 335 -----~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg 406 (409)
|+|||.++++++. +.+++|++ ++... .....+ .+++|+ ||+++++++.+.
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~~---g~~~~---~~~~~v---------------~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFID---GERVE---APQGNH---------------GRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEET---TEEEC---CCSSEE---------------EEEEEE-TTEEEEEEEETT
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEEE---CCeec---cCCCce---------------EEEEec-CCEEEEEEcCCC
Confidence 9999988888865 99999998 44332 122222 589999 999999888764
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=7.4e-21 Score=186.28 Aligned_cols=281 Identities=9% Similarity=0.056 Sum_probs=184.9
Q ss_pred cEEEEEECCCCCEEEEEecCCeEEEEeccCC---cCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 34 IVSAIEFDKTGDYLAVGDRGGRVILFETVGG---KNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
.|.+++|+|||++|++++. +.|.+||+.++ .. ..+..|.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~----------------------------~~l~~~~--------- 151 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV----------------------------RQLTHGE--------- 151 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC----------------------------CBCCCSS---------
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE----------------------------EEcccCC---------
Confidence 4789999999999999986 89999999887 42 2355665
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccc---cccccccCceeccCCCCCceeec
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSE---NTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..+..++| +|||++|++++. +.|++||+.+++...+............ .............+++++..++.
T Consensus 152 ---~~~~~~~~--SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~ 225 (741)
T 2ecf_A 152 ---GFATDAKL--SPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAY 225 (741)
T ss_dssp ---SCEEEEEE--CTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEE
T ss_pred ---cccccccC--CCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEE
Confidence 78999999 899999998874 6899999998876654332111000000 00000011234455666666655
Q ss_pred ccccc-------------------------------cceeEEEecCC-cccceeeeeecc-ccccceeEEEeCCCCCeEE
Q 015290 188 LEWTE-------------------------------NMATKIANVGN-SVHARCQKVYPH-AHDFNINSISNNSDCETFV 234 (409)
Q Consensus 188 ~~~~~-------------------------------~~~i~~~~~~~-~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~ 234 (409)
+.... ...+.+||+.+ ... ...... .|...+..++| |||++|+
T Consensus 226 ~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~ 301 (741)
T 2ecf_A 226 ARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLS 301 (741)
T ss_dssp EEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC---EEECCCSCSSEEEEEEEE-EETTEEE
T ss_pred EEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce---EEecCCCCcceEEEEEEe-CCCCEEE
Confidence 54311 11677888765 432 222111 47788999999 9999998
Q ss_pred Ee-c-----CCeEEEEEccCCCceeeeeecCCCcCcCccC----ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccc
Q 015290 235 SA-D-----DLRINLWNLEISDQCFNIVDMKPSNMDDLTE----VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCD 304 (409)
Q Consensus 235 ~~-~-----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~ 304 (409)
++ . +..|++||+. ++.....+ ..+.. .+.+++|+|+| +++++++.||.++||.+.....
T Consensus 302 ~~~~~~~~~~~~i~~~d~~-~g~~~~~~-------~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~~~~~~-- 370 (741)
T 2ecf_A 302 FQRQSRDQKKLDLVEVTLA-SNQQRVLA-------HETSPTWVPLHNSLRFLDDG-SILWSSERTGFQHLYRIDSKGK-- 370 (741)
T ss_dssp EEEEETTSSEEEEEEEETT-TCCEEEEE-------EEECSSCCCCCSCCEECTTS-CEEEEECTTSSCEEEEECSSSC--
T ss_pred EEEecccCCeEEEEEEECC-CCceEEEE-------EcCCCCcCCcCCceEECCCC-eEEEEecCCCccEEEEEcCCCC--
Confidence 75 3 5679999998 55555442 22221 34688999999 8999999999888887653110
Q ss_pred cccccccccccccCCcccccccccceeee-EeccCCCEEEE-eec-C--eEEEEEccCCCcceEEEecccCccccccccc
Q 015290 305 HSARILRDAAESHGSKSFFTEIIASISDI-KFANDGQHLLS-RDY-M--NLKLWDIRMDSTPVATFKIHEHLRPKLCDLY 379 (409)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~g~~l~s-g~~-~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (409)
...+.. |...+..+ .|+|+|+.|+. +++ + .++||++...+.....+.. ...+
T Consensus 371 --~~~l~~-------------~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~------- 427 (741)
T 2ecf_A 371 --AAALTH-------------GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGM------- 427 (741)
T ss_dssp --EEESCC-------------SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSE-------
T ss_pred --eeeeee-------------cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCc-------
Confidence 122222 24467776 59999997764 443 4 8999998754555666654 2222
Q ss_pred CCCCccceeeEEEcCCCCeEEEccc
Q 015290 380 NNDSIFDKFECSVSGDGLHFATGSY 404 (409)
Q Consensus 380 ~~~~~~~v~~~~~spdg~~l~s~s~ 404 (409)
..++|||||++|+....
T Consensus 428 --------~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 428 --------HSASFARNASVYVDSWS 444 (741)
T ss_dssp --------EEEEECTTSSEEEEEEE
T ss_pred --------eEEEECCCCCEEEEEec
Confidence 58999999998886543
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=2.3e-20 Score=189.07 Aligned_cols=280 Identities=11% Similarity=0.074 Sum_probs=195.6
Q ss_pred ccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
.+|...+.++.|+++ .++++++.|+.++||.+..... ....+..|.
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~--------------------------~~~~l~~~~------- 245 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGK--------------------------DLRKHTSFT------- 245 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSC--------------------------SCEECCCCC-------
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCC--------------------------cceEecCCC-------
Confidence 358889999999998 6777888889999998764221 123344444
Q ss_pred cceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCC-CCCceeec
Q 015290 109 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNP-PSFAHGYH 187 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 187 (409)
.+..++| +|+|+.|+++. ++.|.+|++...... ..... ..............+....++ +++..++.
T Consensus 246 ------~~~~~~~--SpDG~~la~~~-~~~i~~~d~~~~~l~-~l~~~--~~~~~~~~~~~~~~v~~~~~S~pdG~~la~ 313 (1045)
T 1k32_A 246 ------DYYPRHL--NTDGRRILFSK-GGSIYIFNPDTEKIE-KIEIG--DLESPEDRIISIPSKFAEDFSPLDGDLIAF 313 (1045)
T ss_dssp ------SSCEEEE--EESSSCEEEEE-TTEEEEECTTTCCEE-ECCCC--CCCBCCSEEEECGGGGEEEEEECGGGCEEE
T ss_pred ------CcceeeE--cCCCCEEEEEe-CCEEEEecCCceEee-eeccC--cccccccccccccccceeeecCCCCCEEEE
Confidence 3566788 78999888874 899999999554433 11110 000000001112234445556 66666666
Q ss_pred ccccccceeEEEecCCcccceeeeeecccccc-ceeEEEeCCCCCeEEEe-cCCeEE-EEEccCCCceeeeeecCCCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDF-NINSISNNSDCETFVSA-DDLRIN-LWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~~~-~d~~i~-lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
+. ++.+.+|+..... ... + ..|.. .+..++|+ +|+.++++ .++.+. +||+. .+.... +.
T Consensus 314 ~~---~~~i~~~~~~~~~---~~~-~-~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~-~~~~~~--------l~ 375 (1045)
T 1k32_A 314 VS---RGQAFIQDVSGTY---VLK-V-PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR-TGKAEK--------FE 375 (1045)
T ss_dssp EE---TTEEEEECTTSSB---EEE-C-SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT-TCCEEE--------CC
T ss_pred EE---cCEEEEEcCCCCc---eEE-c-cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC-CCCceE--------ec
Confidence 55 6789999987532 222 2 45666 88999999 99999988 877888 88987 444332 33
Q ss_pred CccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEE
Q 015290 265 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 344 (409)
Q Consensus 265 ~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 344 (409)
+|...+..++|+|+| ++|++++.++.|++||+.+++.. ..... |...+..++|+|||++|++
T Consensus 376 ~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~~----~~~~~-------------~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPT----VIERS-------------REAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp CCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE----EEEEC-------------SSSCCCCEEECTTSCEEEE
T ss_pred CCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCceE----EeccC-------------CCCCccceEECCCCCeEEE
Confidence 677889999999999 99999999999999999887641 22222 3567899999999999987
Q ss_pred eec-C----------eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 345 RDY-M----------NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 345 g~~-~----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
++. + .|++||+.. ++ ...+..|.... ..++|+|||++|++++.++.
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~-g~-~~~l~~~~~~~---------------~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEG-RK-IFAATTENSHD---------------YAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTT-TE-EEECSCSSSBE---------------EEEEECTTSCEEEEEESCCC
T ss_pred EecCccccccCCCCCeEEEEECCC-Cc-EEEeeCCCccc---------------CCceEcCCCCEEEEEecccC
Confidence 753 3 899999975 54 55666565443 58999999999998887553
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=8.3e-20 Score=166.47 Aligned_cols=229 Identities=9% Similarity=0.085 Sum_probs=147.5
Q ss_pred ccCCCcEEEEEECCCCCEEE----EEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccc
Q 015290 29 LQDVDIVSAIEFDKTGDYLA----VGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEF 104 (409)
Q Consensus 29 ~~h~~~v~~v~~~~~~~~la----~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 104 (409)
+.+...|++++|+|+|++|| +|+.|+.|+|||+.+..... .. .......+..+.+|.
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~----~~------------~~~~~~~~~~~~~h~--- 149 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEA----KQ------------QKRPFAYHKLLKDAG--- 149 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTT----CS------------SCCCSEEEECCCSGG---
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCC----cC------------CcceeeeeeccCCCC---
Confidence 34667899999999999999 78899999999987641000 00 000111245567788
Q ss_pred cccccceeccceEEEEEEecCC-CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCc
Q 015290 105 DYLKSLEIEEKINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA 183 (409)
Q Consensus 105 ~~~~~~~~~~~v~~l~~~~s~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (409)
..|.+++| +|+ +.+|++++.||+|++||++++.....
T Consensus 150 ---------~~V~~v~~--~p~~~~~las~s~Dg~v~iwD~~~~~~~~~------------------------------- 187 (434)
T 2oit_A 150 ---------GMVIDMKW--NPTVPSMVAVCLADGSIAVLQVTETVKVCA------------------------------- 187 (434)
T ss_dssp ---------GSEEEEEE--CSSCTTEEEEEETTSCEEEEEESSSEEEEE-------------------------------
T ss_pred ---------CceEEEEE--CCCCCCEEEEEECCCeEEEEEcCCCcceee-------------------------------
Confidence 89999999 576 78999999999999999987633211
Q ss_pred eeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCc
Q 015290 184 HGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSN 262 (409)
Q Consensus 184 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~ 262 (409)
..+|...|.+++|+|+|++|++| .||.|++||.+ +.....+......
T Consensus 188 ------------------------------~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~--~~~~~~~~~~~~~ 235 (434)
T 2oit_A 188 ------------------------------TLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT--LQEKKVIPCPPFY 235 (434)
T ss_dssp ------------------------------EECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT--CCEEEEECCCTTC
T ss_pred ------------------------------ccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC--CcccccccCCccc
Confidence 14578899999999999999999 99999999998 3333333222111
Q ss_pred CcCccCceEEEEEeCCCCCEEEE-EeCCC------eEEEEeCCCccccccccccccccccccCCcccccccccceeeeEe
Q 015290 263 MDDLTEVITSAEFHPIYCNLLAY-SSSRG------FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKF 335 (409)
Q Consensus 263 ~~~~~~~v~~~~~~p~~~~~l~s-~s~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 335 (409)
...|...+.+++|++++ .++++ .+.+| .+++|+++..+... ...+... ..+ ...+.+.+.+-..+.+
T Consensus 236 ~~~~~~~v~~v~w~~~~-~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~--~~~~~~~-~~~--~~~~~~~r~~~~~~~~ 309 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTY-VFAIVYAAADGTLETSPDVVMALLPKKEEKH--PEIFVNF-MEP--CYGSCTERQHHYYLSY 309 (434)
T ss_dssp CTTSCEEEEEEEEEETT-EEEEEEEETTCCSSSCCEEEEEECCCTTTCC--CCEEEEC-CCS--SCCCCSSSCCCEEEEE
T ss_pred CCCCceeEEEEEEecCc-eEEEEEccCCCccCCCCceEEEEeccCCCCC--CcceEec-ccC--CCCCCCCcCcceeeeh
Confidence 12344589999999987 65544 33443 38999998653110 0111110 000 0001111222223444
Q ss_pred ccCCCEEEEee-c-CeEEEEEcc
Q 015290 336 ANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 336 s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
-++.+++++++ . ..|.|....
T Consensus 310 l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 310 IEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EGGGTEEEEEETTCSBCEEEEEC
T ss_pred hccCCEEEEecCCCCceeEEEec
Confidence 47777777664 2 667777654
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=5.2e-20 Score=186.46 Aligned_cols=285 Identities=9% Similarity=0.060 Sum_probs=191.4
Q ss_pred ccccCCCcEEEEEECCCCCEEEEEecC------CeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCC
Q 015290 27 EELQDVDIVSAIEFDKTGDYLAVGDRG------GRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSH 100 (409)
Q Consensus 27 ~~~~h~~~v~~v~~~~~~~~la~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 100 (409)
....|...+.+++|||||++||+++.+ ..|.+|++.+++ ...+..|
T Consensus 47 ~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~----------------------------~~~lt~~ 98 (1045)
T 1k32_A 47 KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE----------------------------IKRITYF 98 (1045)
T ss_dssp EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE----------------------------EEECCCC
T ss_pred EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC----------------------------eEEcccC
Confidence 344588999999999999999988654 378999988765 3456777
Q ss_pred Cccccccccceeccce-------EEEEEEecCCCCEEEEEeCC------CeEEEEEcCCceeeeeeccCCC---------
Q 015290 101 EPEFDYLKSLEIEEKI-------NRVRWCAAPNGSMFILSTND------KTIKLWKVRDQKVKKIKEMDHF--------- 158 (409)
Q Consensus 101 ~~~~~~~~~~~~~~~v-------~~l~~~~s~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~--------- 158 (409)
. ..+ .+++| +|||+.+++++.+ ..|.+|++.++....+......
T Consensus 99 ~------------~~~~~~~~~~~~~~~--SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l 164 (1045)
T 1k32_A 99 S------------GKSTGRRMFTDVAGF--DPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRR 164 (1045)
T ss_dssp C------------EEEETTEECSEEEEE--CTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEE
T ss_pred C------------CcccccccccccccC--CCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEE
Confidence 7 566 89999 8999977777654 3578888877654432211000
Q ss_pred ---------------------------------------ccccccccccc--------cc--Cce---------------
Q 015290 159 ---------------------------------------PFVSSENTLLA--------EK--NFM--------------- 174 (409)
Q Consensus 159 ---------------------------------------~~~~~~~~~~~--------~~--~~~--------------- 174 (409)
..+.+..+... ++ .+.
T Consensus 165 ~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~ 244 (1045)
T 1k32_A 165 VIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSF 244 (1045)
T ss_dssp EEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCC
T ss_pred EEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCC
Confidence 00000000000 00 000
Q ss_pred ----eccCCCCCceeecccccccceeEEEecCCcccceeeeeeccc-----------cccceeEEEeC-CCCCeEEEecC
Q 015290 175 ----NEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHA-----------HDFNINSISNN-SDCETFVSADD 238 (409)
Q Consensus 175 ----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~l~~~-~~~~~l~~~~d 238 (409)
...+++++..++.+ .++.+.+|+++. ..+..+ .. |...+.+++|+ |+|+.|+++.+
T Consensus 245 ~~~~~~~~SpDG~~la~~---~~~~i~~~d~~~----~~l~~l-~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~ 316 (1045)
T 1k32_A 245 TDYYPRHLNTDGRRILFS---KGGSIYIFNPDT----EKIEKI-EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR 316 (1045)
T ss_dssp CSSCEEEEEESSSCEEEE---ETTEEEEECTTT----CCEEEC-CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEET
T ss_pred CCcceeeEcCCCCEEEEE---eCCEEEEecCCc----eEeeee-ccCcccccccccccccccceeeecCCCCCEEEEEEc
Confidence 00111122222222 356788888732 122222 22 34578999999 99999998877
Q ss_pred CeEEEEEccCCCceeeeeecCCCcCcCccC-ceEEEEEeCCCCCEEEEEeCCCeEE-EEeCCCccccccccccccccccc
Q 015290 239 LRINLWNLEISDQCFNIVDMKPSNMDDLTE-VITSAEFHPIYCNLLAYSSSRGFVR-LVDMRQSALCDHSARILRDAAES 316 (409)
Q Consensus 239 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~s~s~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~ 316 (409)
+.|.+|++. .+.... +..|.. .+..++|+ +| +.|++++.++.+. +||+..++. ..+..
T Consensus 317 ~~i~~~~~~-~~~~~~--------~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~-----~~l~~---- 376 (1045)
T 1k32_A 317 GQAFIQDVS-GTYVLK--------VPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKA-----EKFEE---- 376 (1045)
T ss_dssp TEEEEECTT-SSBEEE--------CSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCE-----EECCC----
T ss_pred CEEEEEcCC-CCceEE--------ccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCc-----eEecC----
Confidence 899999988 444332 345666 89999999 98 8899888888888 899877542 11112
Q ss_pred cCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCC
Q 015290 317 HGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD 395 (409)
Q Consensus 317 ~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd 395 (409)
|...+..++|+|||++|++++. +.|++||+.+ ++....+.+|...+ .+++||||
T Consensus 377 ---------~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v---------------~~~~~SpD 431 (1045)
T 1k32_A 377 ---------NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKPTVIERSREAMI---------------TDFTISDN 431 (1045)
T ss_dssp ---------CCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECSSSCC---------------CCEEECTT
T ss_pred ---------CccceeeeEECCCCCEEEEECCCCeEEEEECCC-CceEEeccCCCCCc---------------cceEECCC
Confidence 2457899999999999999875 9999999985 77776776776654 48999999
Q ss_pred CCeEEEcccCC
Q 015290 396 GLHFATGSYRR 406 (409)
Q Consensus 396 g~~l~s~s~dg 406 (409)
|++|++++.++
T Consensus 432 G~~la~~~~~~ 442 (1045)
T 1k32_A 432 SRFIAYGFPLK 442 (1045)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEEecCc
Confidence 99999887653
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=4.9e-19 Score=156.04 Aligned_cols=259 Identities=9% Similarity=0.012 Sum_probs=164.7
Q ss_pred CCcEEEEEECCCCCEEEEEec-CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 32 VDIVSAIEFDKTGDYLAVGDR-GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
...+ .++|+|+|+++++++. ++.|.+||..+++. ....+..+.
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--------------------------~~~~~~~~~--------- 83 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP--------------------------KVVAIQEGQ--------- 83 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC--------------------------EEEEEEECS---------
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce--------------------------eEEecccCC---------
Confidence 4556 9999999997766665 88999999987762 133344444
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCC---eEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDK---TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
.+..+++| +|++++++++..++ .|.+||+.+++........ .....+.+++++.+++.
T Consensus 84 ---~~~~~~~~--s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--------------~~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 84 ---SSMADVDI--TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP--------------YDAVGIAISPNGNGLIL 144 (331)
T ss_dssp ---SCCCCEEE--CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC--------------TTEEEEEECTTSSCEEE
T ss_pred ---CCccceEE--CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC--------------CCccceEECCCCCEEEE
Confidence 44555999 79999999555442 8999999988776554321 11234445566655544
Q ss_pred ccccccce-eEEEecCCcccceee-eeeccccccceeEEEeCCCCCeEEE-e-cCCeEEEEEccCCCce---eeeeecCC
Q 015290 188 LEWTENMA-TKIANVGNSVHARCQ-KVYPHAHDFNINSISNNSDCETFVS-A-DDLRINLWNLEISDQC---FNIVDMKP 260 (409)
Q Consensus 188 ~~~~~~~~-i~~~~~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~-~-~d~~i~lwd~~~~~~~---~~~~~~~~ 260 (409)
.... ++. +.+|++......... ... ......+..++|+|++++++. + .++.|.+||+. .+.. +..+
T Consensus 145 ~~~~-~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~-~~~~~~~~~~~---- 217 (331)
T 3u4y_A 145 IDRS-SANTVRRFKIDADGVLFDTGQEF-ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ-NPENITLLNAV---- 217 (331)
T ss_dssp EEET-TTTEEEEEEECTTCCEEEEEEEE-ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS-STTSCEEEEEE----
T ss_pred EecC-CCceEEEEEECCCCcEeecCCcc-ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECC-CCcccceeeec----
Confidence 4332 355 999998752211111 111 133455789999999996655 5 78999999998 5555 4442
Q ss_pred CcCcCccCceEEEEEeCCCCCEEEEE-eCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCC
Q 015290 261 SNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG 339 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 339 (409)
. ....+..++|+|+| ++++.+ ..++.|.+||+.+++... +..+.. . .............++|+|||
T Consensus 218 ---~-~~~~~~~~~~spdg-~~l~v~~~~~~~i~~~d~~~~~~~~--~~~~~~---~---~~~~~~~~~~~~~~~~spdg 284 (331)
T 3u4y_A 218 ---G-TNNLPGTIVVSRDG-STVYVLTESTVDVFNFNQLSGTLSF--VKSFGH---G---LLIDPRPLFGANQMALNKTE 284 (331)
T ss_dssp ---E-CSSCCCCEEECTTS-SEEEEECSSEEEEEEEETTTTEEEE--EEEEEC---C---CCCCCGGGTTCCCEEECTTS
T ss_pred ---c-CCCCCceEEECCCC-CEEEEEEcCCCEEEEEECCCCceee--eccccc---c---cccCCCCcccccceEECCCC
Confidence 2 23556789999999 755544 457889999998876411 011111 0 00000011223568999999
Q ss_pred CEEEEee-c-CeEEEEEccCCCcceEEEec
Q 015290 340 QHLLSRD-Y-MNLKLWDIRMDSTPVATFKI 367 (409)
Q Consensus 340 ~~l~sg~-~-~~v~iwd~~~~~~~~~~~~~ 367 (409)
++|++++ + +.|.+||+. .+.+..+.+
T Consensus 285 ~~l~v~~~~~~~v~v~d~~--~~~~~~~~~ 312 (331)
T 3u4y_A 285 TKLFISANISRELKVFTIS--GKVVGYVAG 312 (331)
T ss_dssp SEEEEEETTTTEEEEEETT--SCEEEECTT
T ss_pred CEEEEecCCCCcEEEEEec--CCcccceec
Confidence 9887654 4 899999997 344444433
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=3.6e-20 Score=160.22 Aligned_cols=215 Identities=12% Similarity=0.125 Sum_probs=150.5
Q ss_pred EEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccceEEEEEEecCCCC
Q 015290 49 VGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWCAAPNGS 128 (409)
Q Consensus 49 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~~s~~~~ 128 (409)
.++.|+.|++||+.+++. ..+..|. ..|.+++| +|+++
T Consensus 17 ~~~~~~~i~~~d~~~~~~----------------------------~~~~~~~------------~~v~~~~~--spdg~ 54 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM----------------------------RVVWQTP------------ELFEAPNW--SPDGK 54 (297)
T ss_dssp -CCCCEEEEEEETTTTEE----------------------------EEEEEES------------SCCEEEEE--CTTSS
T ss_pred CCCcceeEEEEeCCCCce----------------------------eeeccCC------------cceEeeEE--CCCCC
Confidence 356789999999987752 2344566 78999999 89999
Q ss_pred EEEEEeCCCeEEEEEcCC-ceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecCCcccc
Q 015290 129 MFILSTNDKTIKLWKVRD-QKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHA 207 (409)
Q Consensus 129 ~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 207 (409)
+|++++ ++.|++||+.+ ++......
T Consensus 55 ~l~~~~-~~~i~~~d~~~~~~~~~~~~----------------------------------------------------- 80 (297)
T 2ojh_A 55 YLLLNS-EGLLYRLSLAGDPSPEKVDT----------------------------------------------------- 80 (297)
T ss_dssp EEEEEE-TTEEEEEESSSCCSCEECCC-----------------------------------------------------
T ss_pred EEEEEc-CCeEEEEeCCCCCCceEecc-----------------------------------------------------
Confidence 999887 78999999988 65433211
Q ss_pred eeeeeeccccccceeEEEeCCCCCeEEEe-cC--CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEE
Q 015290 208 RCQKVYPHAHDFNINSISNNSDCETFVSA-DD--LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA 284 (409)
Q Consensus 208 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d--~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 284 (409)
..+...+.+++|+|++++|+++ .+ +...||.+......... +..+ ..+..++|+|++ +.|+
T Consensus 81 -------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~-~~~~~~~~spdg-~~l~ 144 (297)
T 2ojh_A 81 -------GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRL-------MTKN-LPSYWHGWSPDG-KSFT 144 (297)
T ss_dssp -------TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEE-------CCSS-SSEEEEEECTTS-SEEE
T ss_pred -------ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEE-------eecC-CCccceEECCCC-CEEE
Confidence 1223567889999999999987 33 45666655422222322 2223 348899999999 7666
Q ss_pred -EEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee--cCeEEEEEccCCCcc
Q 015290 285 -YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--YMNLKLWDIRMDSTP 361 (409)
Q Consensus 285 -s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~--~~~v~iwd~~~~~~~ 361 (409)
+++.++.+++|+++..... ...+. .+...+.+++|+|+|++|+.++ ++.++||++...+..
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~---~~~~~-------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~ 208 (297)
T 2ojh_A 145 YCGIRDQVFDIYSMDIDSGV---ETRLT-------------HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS 208 (297)
T ss_dssp EEEEETTEEEEEEEETTTCC---EEECC-------------CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EEECCCCceEEEEEECCCCc---ceEcc-------------cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCC
Confidence 7888999999986432111 11111 2245789999999999888664 488999998744566
Q ss_pred eEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCC
Q 015290 362 VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRR 406 (409)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg 406 (409)
+..+..+...+ ..++|+|||++|++++.++
T Consensus 209 ~~~~~~~~~~~---------------~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 209 VERITDSAYGD---------------WFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp EEECCCCSEEE---------------EEEEECTTSSEEEEEEEET
T ss_pred cEEEecCCccc---------------CCeEECCCCCEEEEEEcCC
Confidence 66666555433 5899999999999888763
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=7.2e-20 Score=178.25 Aligned_cols=285 Identities=11% Similarity=0.061 Sum_probs=181.0
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
..|.+++|+|| ++++.+. ++.|++||+.+++. ..+..+.
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~----------------------------~~l~~~~----------- 120 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKV----------------------------TYLFDTN----------- 120 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEE----------------------------EEEECCT-----------
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCce----------------------------EEccCCc-----------
Confidence 56999999999 6666554 59999999987652 2334444
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCC-----ceeeeeeccCCCccccccc-ccccccCceeccCCCCCceee
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRD-----QKVKKIKEMDHFPFVSSEN-TLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 186 (409)
..+.+++| +|||+.|+++ .|+.|++||+.+ ++................. ............+++++..++
T Consensus 121 -~~~~~~~~--SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 121 -EETASLDF--SPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp -TCCTTCEE--CTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred -ccccCCcC--CCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 57888999 8999999985 679999999988 7655433221111000000 000011134455667777666
Q ss_pred cccc-------------------------------cccceeEEEecCCcccceeeeeec-cccccceeEEEeCCCCCeEE
Q 015290 187 HLEW-------------------------------TENMATKIANVGNSVHARCQKVYP-HAHDFNINSISNNSDCETFV 234 (409)
Q Consensus 187 ~~~~-------------------------------~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~ 234 (409)
.+.. ..+..+.+||+.+.. ...... ..+...+.+++|+|||+.|+
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK---TVYLQTGEPKEKFLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE---EEECCCCSCTTCEEEEEEECTTSSEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc---eEeeccCCCCceeEeeEEEECCCCEEE
Confidence 6542 134589999997643 222221 25667899999999999998
Q ss_pred Ee-cCC-----eEEEEEccCCC-ceeeeeecCCCcCcCccCceEEEEEeC--CCCCEEEEEeCCCeEEEEeCC-Cccccc
Q 015290 235 SA-DDL-----RINLWNLEISD-QCFNIVDMKPSNMDDLTEVITSAEFHP--IYCNLLAYSSSRGFVRLVDMR-QSALCD 304 (409)
Q Consensus 235 ~~-~d~-----~i~lwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~s~dg~i~iwd~~-~~~~~~ 304 (409)
++ .++ .|.+||+. ++ ......... .......+.+++|+| +| +++++++.|+.+++|++. .++.
T Consensus 274 ~~~~~~~~~~~~v~~~d~~-~g~~~~~~~~~~---~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~~~~-- 346 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAE-TGRFVRTLFVET---DKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTTGRL-- 346 (706)
T ss_dssp EEEECTTSCEEEEEEEETT-TCCEEEEEEEEE---CSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEETTSCE--
T ss_pred EEEeCCCCCeeEEEEEECC-CCceeeEEEEcc---CCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEECCCCE--
Confidence 86 654 89999998 55 332221100 011112246789999 99 899999999999999875 3221
Q ss_pred cccccccccccccCCcccccccccceee-eEeccCCCEEEEee-c-C----eEEEEEccCCCcceEEEecccCccccccc
Q 015290 305 HSARILRDAAESHGSKSFFTEIIASISD-IKFANDGQHLLSRD-Y-M----NLKLWDIRMDSTPVATFKIHEHLRPKLCD 377 (409)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~sg~-~-~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 377 (409)
...+.. +...+.. ++|+|+|+.|+.++ + + .|..||+.. ++ ...+. +...+
T Consensus 347 --~~~l~~-------------~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~-~~~~~----- 403 (706)
T 2z3z_A 347 --IRQVTK-------------GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG-GK-TKDLT-PESGM----- 403 (706)
T ss_dssp --EEECCC-------------SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC-CC-CEESC-CSSSE-----
T ss_pred --EEecCC-------------CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC-CC-ceecc-CCCce-----
Confidence 122222 2345665 79999999887553 3 4 566667653 33 33333 33222
Q ss_pred ccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 378 LYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 378 ~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
.+++|||||++|+..+.+
T Consensus 404 ----------~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 404 ----------HRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp ----------EEEEECTTSSEEEEEEEC
T ss_pred ----------EEEEECCCCCEEEEEecC
Confidence 589999999988876443
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.86 E-value=2.7e-19 Score=157.91 Aligned_cols=265 Identities=10% Similarity=0.075 Sum_probs=175.0
Q ss_pred CEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeec-CCCccccccccceecc-ceEEEEEE
Q 015290 45 DYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQ-SHEPEFDYLKSLEIEE-KINRVRWC 122 (409)
Q Consensus 45 ~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~-~v~~l~~~ 122 (409)
++|++++.++.|.+||..+++. +..+. ++. . .+..++|
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~---------------------------~~~~~~~~~------------~~~~~~~~~- 41 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV---------------------------DKVITIADA------------GPTPMVPMV- 41 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE---------------------------EEEEECTTC------------TTCCCCEEE-
T ss_pred cEEEEcCCCCeEEEEECCCCcE---------------------------EEEEEcCCC------------CCCccceEE-
Confidence 5789999999999999987652 23332 221 1 4778999
Q ss_pred ecCCCCEEE-EEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc----------
Q 015290 123 AAPNGSMFI-LSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT---------- 191 (409)
Q Consensus 123 ~s~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 191 (409)
+|+++.++ ++..++.|.+||+.+++........... ........+.+++++..++.+...
T Consensus 42 -s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 42 -APGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE--------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp -CTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT--------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred -cCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc--------cccccccceEECCCCCEEEEEecccccccccccc
Confidence 79997765 5566789999999988766544321100 000122233445555555555311
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceE
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 271 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 271 (409)
.++.|.+||+.+. +....+ . ....+.+++|+|++++++++ ++.|.+||+. .++....+... .....
T Consensus 113 ~~~~i~v~d~~~~---~~~~~~-~-~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~-~~~~~~~~~~~-----~~~~~-- 178 (337)
T 1pby_B 113 QPTRVALYDAETL---SRRKAF-E-APRQITMLAWARDGSKLYGL-GRDLHVMDPE-AGTLVEDKPIQ-----SWEAE-- 178 (337)
T ss_dssp CCCEEEEEETTTT---EEEEEE-E-CCSSCCCEEECTTSSCEEEE-SSSEEEEETT-TTEEEEEECST-----TTTTT--
T ss_pred cCceEEEEECCCC---cEEEEE-e-CCCCcceeEECCCCCEEEEe-CCeEEEEECC-CCcEeeeeecc-----ccCCC--
Confidence 3689999999763 333333 2 23457889999999988887 6789999998 66655543211 11122
Q ss_pred EEEEeCCCCCEEEEEe-CCC-----------------------eEEEEeCCCccccccccccccccccccCCcccccccc
Q 015290 272 SAEFHPIYCNLLAYSS-SRG-----------------------FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 327 (409)
Q Consensus 272 ~~~~~p~~~~~l~s~s-~dg-----------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (409)
+.|+|++ ..++..+ .++ .|.+||+.+++.. .... ..+.
T Consensus 179 -~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-----~~~~-----------~~~~ 240 (337)
T 1pby_B 179 -TYAQPDV-LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-----MREV-----------RIMD 240 (337)
T ss_dssp -TBCCCBC-CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-----EEEE-----------EECS
T ss_pred -ceeCCCc-cEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-----Eeec-----------CCCC
Confidence 2678988 5444333 333 4689998886531 1111 1223
Q ss_pred cceeeeEeccCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 328 ASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 328 ~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
..+..++|+|||++|+++ ++.|++||+.+ ++.+..+..+... .+++|+|||++|++++.++.
T Consensus 241 ~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~-~~~~~~~~~~~~~----------------~~~~~s~dg~~l~~~~~~~~ 302 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGA-YNVLESFDLEK-NASIKRVPLPHSY----------------YSVNVSTDGSTVWLGGALGD 302 (337)
T ss_dssp SCEEEEEECTTSSEEEEE-ESEEEEEETTT-TEEEEEEECSSCC----------------CEEEECTTSCEEEEESBSSE
T ss_pred CceeeEEECCCCCEEEEe-CCeEEEEECCC-CcCcceecCCCce----------------eeEEECCCCCEEEEEcCCCc
Confidence 467789999999999988 79999999985 7777777654433 48999999999998887775
Q ss_pred C
Q 015290 408 N 408 (409)
Q Consensus 408 i 408 (409)
|
T Consensus 303 i 303 (337)
T 1pby_B 303 L 303 (337)
T ss_dssp E
T ss_pred E
Confidence 4
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=1.2e-19 Score=177.13 Aligned_cols=291 Identities=10% Similarity=0.106 Sum_probs=174.5
Q ss_pred cEEEEEECCCCCEEEEEecC---------CeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccc
Q 015290 34 IVSAIEFDKTGDYLAVGDRG---------GRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEF 104 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~d---------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 104 (409)
.|.+++|||||++||+++.+ +.|.+||+.+++. +.+....+|.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------------------------~~l~~~~~~~--- 113 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-------------------------QSLDPPEVSN--- 113 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-------------------------EECCCTTCCS---
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-------------------------EeccCCcccc---
Confidence 48999999999999999764 7888999988763 1122233444
Q ss_pred cccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCccccc-cc----ccccccCceeccCC
Q 015290 105 DYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSS-EN----TLLAEKNFMNEHNP 179 (409)
Q Consensus 105 ~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~ 179 (409)
..+..++| ||||+.|++++. +.|++||+.+++...+........+.. .. .....+......++
T Consensus 114 ---------~~~~~~~~--SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~S 181 (723)
T 1xfd_A 114 ---------AKLQYAGW--GPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWS 181 (723)
T ss_dssp ---------CCCSBCCB--CSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEEC
T ss_pred ---------ccccccEE--CCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEEC
Confidence 56888999 899999999886 789999999887665543221110000 00 00000111334455
Q ss_pred CCCceeeccccc--------------------------------ccceeEEEecCCcccceeeee--eccccccceeEEE
Q 015290 180 PSFAHGYHLEWT--------------------------------ENMATKIANVGNSVHARCQKV--YPHAHDFNINSIS 225 (409)
Q Consensus 180 ~~~~~~~~~~~~--------------------------------~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~v~~l~ 225 (409)
+++..++.+... .+..+++||+.+......+.. ....+...+..++
T Consensus 182 pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~ 261 (723)
T 1xfd_A 182 PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVK 261 (723)
T ss_dssp TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEE
T ss_pred CCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEE
Confidence 555555544321 123799999976432111110 0012367789999
Q ss_pred eCCCCCeEEEe-c----CCeEEEEEccCCCceeeeeecCCCcCcCccCce----EEEEEeCCCCCEEEE--EeCCC----
Q 015290 226 NNSDCETFVSA-D----DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI----TSAEFHPIYCNLLAY--SSSRG---- 290 (409)
Q Consensus 226 ~~~~~~~l~~~-~----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~p~~~~~l~s--~s~dg---- 290 (409)
|+|||+++++. . +..|++||+. +++....+. ..+...+ ..++|+|+| +.|+. +..++
T Consensus 262 ~SpDg~~l~~~~~~~~~~~~i~~~d~~-~g~~~~~~~------~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~ 333 (723)
T 1xfd_A 262 WATSTKVAVTWLNRAQNVSILTLCDAT-TGVCTKKHE------DESEAWLHRQNEEPVFSKDG-RKFFFIRAIPQGGRGK 333 (723)
T ss_dssp ESSSSEEEEEEEETTSCEEEEEEEETT-TCCEEEEEE------EECSSCCCCCCCCCEECTTS-CSEEEEEEECCSSSSC
T ss_pred EeCCCeEEEEEEcCCCCeEEEEEEeCC-CCcceEEEE------eccCCEEeccCCCceEcCCC-CeEEEEEecccCCCcc
Confidence 99999988765 3 3579999998 555544421 1122333 378999999 65554 45666
Q ss_pred --eEEEEe-CCCccccccccccccccccccCCccccccccccee-eeEeccCCCEEEEe-ec---CeEEEEEccCCCc-c
Q 015290 291 --FVRLVD-MRQSALCDHSARILRDAAESHGSKSFFTEIIASIS-DIKFANDGQHLLSR-DY---MNLKLWDIRMDST-P 361 (409)
Q Consensus 291 --~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~~g~~l~sg-~~---~~v~iwd~~~~~~-~ 361 (409)
.|.+|| ...+.. . ....+.. +...+. .++|+|||++|+.. .+ +.++||++...+. .
T Consensus 334 ~~~l~~~d~~~~~~~-~-~~~~l~~-------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 398 (723)
T 1xfd_A 334 FYHITVSSSQPNSSN-D-NIQSITS-------------GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN 398 (723)
T ss_dssp EEEEEEECSSCCSSS-C-CCCBSCC-------------SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC
T ss_pred eeEEEEEeccCCCCc-c-ceeEeec-------------CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCC
Confidence 566677 333320 0 0011111 012333 36999999998754 33 7899999875332 2
Q ss_pred eEEEec---ccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 362 VATFKI---HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 362 ~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
...+.. +...+ ..++|+|||++|+..
T Consensus 399 ~~~l~~~~~~~~~~---------------~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 399 RQCLSCDLVENCTY---------------FSASFSHSMDFFLLK 427 (723)
T ss_dssp CBCSSTTSSSSCCC---------------CEEEECTTSSEEEEE
T ss_pred cceecccccCCCCe---------------EEEEECCCCCEEEEE
Confidence 222322 22222 489999999988764
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=2.6e-19 Score=158.86 Aligned_cols=245 Identities=9% Similarity=0.049 Sum_probs=161.3
Q ss_pred EEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccce
Q 015290 37 AIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKI 116 (409)
Q Consensus 37 ~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v 116 (409)
.++++++++++++++.++.|.+||..+++. +..+..+.. ..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~---------------------------~~~~~~~~~-----------~~~ 45 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV---------------------------YKSCVMPDK-----------FGP 45 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEE---------------------------EEEEECSSC-----------CSS
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcE---------------------------EEEEecCCC-----------CCC
Confidence 456888999999999999999999987652 333332210 257
Q ss_pred EEEEEEecCCCCEEE-EEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccce
Q 015290 117 NRVRWCAAPNGSMFI-LSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMA 195 (409)
Q Consensus 117 ~~l~~~~s~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (409)
..++| +|++++++ ++..++.|.+||+.+++..........+
T Consensus 46 ~~~~~--s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~------------------------------------ 87 (349)
T 1jmx_B 46 GTAMM--APDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP------------------------------------ 87 (349)
T ss_dssp CEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST------------------------------------
T ss_pred ceeEE--CCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc------------------------------------
Confidence 78999 79998665 4557899999999887655432210000
Q ss_pred eEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC------------CeEEEEEccCCCceeeeeecCCCc
Q 015290 196 TKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD------------LRINLWNLEISDQCFNIVDMKPSN 262 (409)
Q Consensus 196 i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d------------~~i~lwd~~~~~~~~~~~~~~~~~ 262 (409)
......+..++|+|+|++++++ .+ +.|.+||+. ++.....+.
T Consensus 88 -------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~----- 142 (349)
T 1jmx_B 88 -------------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA-DGLEAKPVR----- 142 (349)
T ss_dssp -------------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG-GGGGBCCSE-----
T ss_pred -------------------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC-Cccccceee-----
Confidence 0012346789999999999988 55 999999998 433222110
Q ss_pred CcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcccccccccccccccc-cc--------------CCcc------
Q 015290 263 MDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAE-SH--------------GSKS------ 321 (409)
Q Consensus 263 ~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~--------------~~~~------ 321 (409)
...+...+.+++|+|+| + +++++. .|.+||+.+++.. ..+..+.. .+ ....
T Consensus 143 ~~~~~~~~~~~~~s~dg-~-l~~~~~--~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (349)
T 1jmx_B 143 TFPMPRQVYLMRAADDG-S-LYVAGP--DIYKMDVKTGKYT----VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLY 214 (349)
T ss_dssp EEECCSSCCCEEECTTS-C-EEEESS--SEEEECTTTCCEE----EEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEE
T ss_pred eccCCCcccceeECCCC-c-EEEccC--cEEEEeCCCCcee----ccccccccCCccccCccceeeecCCCcceeEEeee
Confidence 11123357889999999 7 444443 4999999887642 11111000 00 0000
Q ss_pred ----------------------------------cccccccceeeeEecc-CCCEEEEeecCeEEEEEccCCCcceEEEe
Q 015290 322 ----------------------------------FFTEIIASISDIKFAN-DGQHLLSRDYMNLKLWDIRMDSTPVATFK 366 (409)
Q Consensus 322 ----------------------------------~~~~~~~~i~~~~~s~-~g~~l~sg~~~~v~iwd~~~~~~~~~~~~ 366 (409)
.+..+...+..++|+| +|++|+++ ++.|.+||+.+ ++.+..+.
T Consensus 215 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~-~~~~~~~~ 292 (349)
T 1jmx_B 215 TIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQ-RKLIKAAN 292 (349)
T ss_dssp EEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTT-TEEEEEEE
T ss_pred eeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECcc-CeEEEEEc
Confidence 0001123466788999 99999988 89999999986 77777776
Q ss_pred cccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 367 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
..... .+++|+|||++|++++.++.|
T Consensus 293 ~~~~~----------------~~~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 293 LDHTY----------------YCVAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp CSSCC----------------CEEEECSSSSCEEEESBSSEE
T ss_pred CCCCc----------------cceEECCCCCEEEEecCCCeE
Confidence 44333 489999999999888777654
No 151
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=3.2e-19 Score=160.92 Aligned_cols=288 Identities=11% Similarity=0.038 Sum_probs=169.5
Q ss_pred CCCcEEE-----EEECCCCCEEEEEec-CCe--EEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCc
Q 015290 31 DVDIVSA-----IEFDKTGDYLAVGDR-GGR--VILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEP 102 (409)
Q Consensus 31 h~~~v~~-----v~~~~~~~~la~~~~-dg~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 102 (409)
|...... .+|+|||++||.++. +|. |.+||+.+++. .....++.
T Consensus 29 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~---------------------------~~lt~~~~- 80 (388)
T 3pe7_A 29 PDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA---------------------------TQLTEGRG- 80 (388)
T ss_dssp TTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEE---------------------------EECCCSSC-
T ss_pred CcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCce---------------------------EEeeeCCC-
Confidence 4444555 889999999999887 674 77778877652 23334444
Q ss_pred cccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC
Q 015290 103 EFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 182 (409)
Q Consensus 103 ~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (409)
..+..+.| +|||+.|+.++.++.|++||+.+++...+....... +.. .....++++
T Consensus 81 -----------~~~~~~~~--spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~-~~~----------~~~~~~~dg 136 (388)
T 3pe7_A 81 -----------DNTFGGFL--SPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEW-VGY----------GTWVANSDC 136 (388)
T ss_dssp -----------BCSSSCEE--CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE-EEE----------EEEEECTTS
T ss_pred -----------CCccceEE--cCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhc-ccc----------cceeECCCC
Confidence 44556779 899999999999999999999988766554322110 000 000112222
Q ss_pred ceeec--------------------ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-CCCeEEEe-cC--
Q 015290 183 AHGYH--------------------LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DD-- 238 (409)
Q Consensus 183 ~~~~~--------------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~-~d-- 238 (409)
..++. .....+..|.+||+.+.. ... + ..+...+..++|+| +|+.|+.. .+
T Consensus 137 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~---~~~-l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~ 211 (388)
T 3pe7_A 137 TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE---STV-I-LQENQWLGHPIYRPYDDSTVAFCHEGPH 211 (388)
T ss_dssp SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC---EEE-E-EEESSCEEEEEEETTEEEEEEEEECSCT
T ss_pred CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc---eEE-e-ecCCccccccEECCCCCCEEEEEEecCC
Confidence 22221 011234578999987642 222 2 34556788999999 99988876 42
Q ss_pred ----CeEEEEEccCCCceeeeeecCCCcCcCcc--CceEEEEEeCCCCCEEEEEeC-CC----eEEEEeCCCcccccccc
Q 015290 239 ----LRINLWNLEISDQCFNIVDMKPSNMDDLT--EVITSAEFHPIYCNLLAYSSS-RG----FVRLVDMRQSALCDHSA 307 (409)
Q Consensus 239 ----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~s~s~-dg----~i~iwd~~~~~~~~~~~ 307 (409)
..|.++|.. .+.. .. +..+. ..+..++|+|+| +.|+..+. ++ .|.+||+.+++.
T Consensus 212 ~~~~~~l~~~d~~-~~~~-~~-------l~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~~----- 276 (388)
T 3pe7_A 212 DLVDARMWLINED-GTNM-RK-------VKTHAEGESCTHEFWVPDG-SALVYVSYLKGSPDRFIYSADPETLEN----- 276 (388)
T ss_dssp TTSSCSEEEEETT-SCCC-EE-------SCCCCTTEEEEEEEECTTS-SCEEEEEEETTCCCEEEEEECTTTCCE-----
T ss_pred CCCcceEEEEeCC-CCce-EE-------eeeCCCCcccccceECCCC-CEEEEEecCCCCCcceEEEEecCCCce-----
Confidence 367777776 3332 22 22233 357789999999 76655432 22 399999988763
Q ss_pred ccccccccccCCcccccccc-cceeeeEeccCCCEEEEe---------e-cCeEEEEEccCCCcceEEEecccCcccccc
Q 015290 308 RILRDAAESHGSKSFFTEII-ASISDIKFANDGQHLLSR---------D-YMNLKLWDIRMDSTPVATFKIHEHLRPKLC 376 (409)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~-~~i~~~~~s~~g~~l~sg---------~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 376 (409)
+.+..... ..|. .....++|+|||+.|+.. . +..|++||+.. ++ +..+..+......
T Consensus 277 ~~l~~~~~--------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~-~~~l~~~~~~~~~-- 344 (388)
T 3pe7_A 277 RQLTSMPA--------CSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN-GT-QHRVARHDTSWKV-- 344 (388)
T ss_dssp EEEEEECC--------EEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT-TE-EEEEEECCCCCCC--
T ss_pred EEEEcCCC--------ceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC-Cc-eEEeccccCcccc--
Confidence 11111000 0000 012334799999988743 2 37899999974 44 4455555431000
Q ss_pred cccCCCCccceeeEEEcCCCCeEEEccc
Q 015290 377 DLYNNDSIFDKFECSVSGDGLHFATGSY 404 (409)
Q Consensus 377 ~~~~~~~~~~v~~~~~spdg~~l~s~s~ 404 (409)
++ .+....+..++|+|||+.|+..+.
T Consensus 345 -~~-~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 345 -FE-GDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp -BT-TBSSTTCCCCEECTTSSEEEEEEC
T ss_pred -cc-cccccCCCCccCCCCCCEEEEEec
Confidence 00 000001148999999998887664
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=2.5e-20 Score=181.83 Aligned_cols=236 Identities=13% Similarity=0.087 Sum_probs=154.3
Q ss_pred EEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccce
Q 015290 37 AIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKI 116 (409)
Q Consensus 37 ~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v 116 (409)
+++|+|||++++++ .|+.|++||+.+++. ...+.+|.. . ...+
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~---------------------------~~~~~~~~~-----~----~~~~ 62 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQS---------------------------YTILSNRTM-----K----SVNA 62 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCE---------------------------EEEECHHHH-----H----TTTC
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcE---------------------------EEEEccccc-----c----ccce
Confidence 78999999766655 699999999998763 223333330 0 0148
Q ss_pred EEEEEEecCCCCEEEEEeC---------CCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 117 NRVRWCAAPNGSMFILSTN---------DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 117 ~~l~~~~s~~~~~l~s~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
.+++| ||||++|++++. ++.|++||+.+++.....
T Consensus 63 ~~~~~--SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~---------------------------------- 106 (719)
T 1z68_A 63 SNYGL--SPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN---------------------------------- 106 (719)
T ss_dssp SEEEE--CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS----------------------------------
T ss_pred eeEEE--CCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce----------------------------------
Confidence 89999 899999998876 688999998877552100
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
.....+..++|+|||+.|+++.++.|++|++. .+...... ..++.
T Consensus 107 ----------------------------~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~-~g~~~~l~------~~~~~ 151 (719)
T 1z68_A 107 ----------------------------ELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRP-GDPPFQIT------FNGRE 151 (719)
T ss_dssp ----------------------------CCCSSBCCEEECSSTTCEEEEETTEEEEESST-TSCCEECC------CCCBT
T ss_pred ----------------------------ecCcccccceECCCCCEEEEEECCeEEEEeCC-CCCcEEEe------cCCCc
Confidence 00134677999999999999977899999998 45444321 12222
Q ss_pred Cce-----------------EEEEEeCCCCCEEEEEeCCC----------------------------------eEEEEe
Q 015290 268 EVI-----------------TSAEFHPIYCNLLAYSSSRG----------------------------------FVRLVD 296 (409)
Q Consensus 268 ~~v-----------------~~~~~~p~~~~~l~s~s~dg----------------------------------~i~iwd 296 (409)
..+ .+++|+||| ++|++++.|. .|++||
T Consensus 152 ~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d 230 (719)
T 1z68_A 152 NKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIID 230 (719)
T ss_dssp TTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred CCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEE
Confidence 212 489999999 9999887652 788899
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-----CeEEEEE----ccCCCcceEEE--
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-----MNLKLWD----IRMDSTPVATF-- 365 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-----~~v~iwd----~~~~~~~~~~~-- 365 (409)
+.+++.. ..+.. .....+.+|...+..++|+||++++++..+ ..|.+|| +.+ +++...+
T Consensus 231 ~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~ 300 (719)
T 1z68_A 231 TTYPAYV----GPQEV-----PVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEH 300 (719)
T ss_dssp SSCHHHH----CCEEC-----CCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEE
T ss_pred CCCCCcc----ceeEc-----cCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEec
Confidence 8876421 00000 000113345678999999999988777432 3588899 654 4443333
Q ss_pred --ecccCcccccccccCCCCccceeeEEEcCCCCeEEE
Q 015290 366 --KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT 401 (409)
Q Consensus 366 --~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 401 (409)
.+|...+... ....++|+|||+.|+.
T Consensus 301 ~~~~~~~~~~~~----------~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 301 IEESRTGWAGGF----------FVSTPVFSYDAISYYK 328 (719)
T ss_dssp EEECSSSCSSSS----------SCCCCEECTTSSCEEE
T ss_pred ccccCCceEccc----------cCCccEECCCCCeEEE
Confidence 3444433100 0016899999996654
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.83 E-value=1.5e-17 Score=148.52 Aligned_cols=265 Identities=9% Similarity=-0.007 Sum_probs=159.8
Q ss_pred CCCcEEEEEECCCCCEEEEEecC----CeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRG----GRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
+...+..++|+|||++|++++.+ +.|.+|+++.... ..+.+.....+.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g-----------------------~~~~~~~~~~~~----- 99 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG-----------------------TLHLLNTQKTMG----- 99 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT-----------------------EEEEEEEEECSS-----
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC-----------------------cEEEeeEeccCC-----
Confidence 45677789999999999999875 7999999876311 112233333333
Q ss_pred cccceeccceEEEEEEecCCCCEEEEEe-CCCeEEEEEcCCceeeeee-cc-CCCcccccccccccccCceeccCCCCCc
Q 015290 107 LKSLEIEEKINRVRWCAAPNGSMFILST-NDKTIKLWKVRDQKVKKIK-EM-DHFPFVSSENTLLAEKNFMNEHNPPSFA 183 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (409)
.....+++ ++++|++++ .++.|.+|++......... .. .... ...............+.+++++.
T Consensus 100 -------~~p~~~~~----dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 100 -------ADPCYLTT----NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKG-SGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp -------SCEEEEEE----CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCC-CCSCTTTCSSCCEEEEEECTTSS
T ss_pred -------CCcEEEEE----CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccC-CCCCccccCCCcceEEEECCCCC
Confidence 45666665 677777765 6889999999754322111 00 0000 00000000011223345566666
Q ss_pred eeecccccccceeEEEecCCccc------ceee---eeeccccccceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCce
Q 015290 184 HGYHLEWTENMATKIANVGNSVH------ARCQ---KVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQC 252 (409)
Q Consensus 184 ~~~~~~~~~~~~i~~~~~~~~~~------~~~~---~~~~~~~~~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~ 252 (409)
+++.... .++.+++|++..... .... ..........+..++|+|+|++++++ .++.|.+|++. .+..
T Consensus 168 ~l~~~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~-~g~~ 245 (361)
T 3scy_A 168 YLLADDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA-DGML 245 (361)
T ss_dssp EEEEEET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE-TTEE
T ss_pred EEEEEeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec-CCce
Confidence 5544332 356899998875432 1110 11113345567899999999987765 68999999998 5543
Q ss_pred eeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC--CCeEEEEeCC--CccccccccccccccccccCCccccccccc
Q 015290 253 FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS--RGFVRLVDMR--QSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~--dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
....... ....+......++|+|+| ++|+++.. ++.|.+|++. +++. ..... +.. ..
T Consensus 246 ~~~~~~~--~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~~i~v~~~~~~~g~~-----~~~~~----------~~~-g~ 306 (361)
T 3scy_A 246 DEIQTVA--ADTVNAQGSGDIHLSPDG-KYLYASNRLKADGVAIFKVDETNGTL-----TKVGY----------QLT-GI 306 (361)
T ss_dssp EEEEEEE--SCSSCCCCEEEEEECTTS-SEEEEEECSSSCEEEEEEECTTTCCE-----EEEEE----------EEC-SS
T ss_pred EEeEEEe--cCCCCCCCcccEEECCCC-CEEEEECCCCCCEEEEEEEcCCCCcE-----EEeeE----------ecC-CC
Confidence 2221111 123344557899999999 87766554 5899999986 3331 11111 000 23
Q ss_pred ceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 329 SISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
.+..++|+|||++|++++ + +.|.+|++.
T Consensus 307 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 307 HPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 577899999999998876 4 999997665
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=5.8e-19 Score=172.43 Aligned_cols=243 Identities=12% Similarity=0.105 Sum_probs=155.1
Q ss_pred cEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceec
Q 015290 34 IVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIE 113 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 113 (409)
...++.|+|||++++++ ||.|++||+.+++. ...+.+|... . ..
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~---------------------------~~~~~~~~~~-----~--~~ 61 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNS---------------------------SVFLENSTFD-----E--FG 61 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCE---------------------------EEEECTTTTT-----T--CC
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCce---------------------------EEEEechhhh-----h--hc
Confidence 45689999999999886 89999999998763 3445666511 0 00
Q ss_pred cceEEEEEEecCCCCEEEEEeCC---------CeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 114 EKINRVRWCAAPNGSMFILSTND---------KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
....++.| ||||++|+.++.+ +.+.+||+.+++...+
T Consensus 62 ~~~~~~~~--Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l-------------------------------- 107 (740)
T 4a5s_A 62 HSINDYSI--SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE-------------------------------- 107 (740)
T ss_dssp SCCCEEEE--CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS--------------------------------
T ss_pred ccccceEE--CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEc--------------------------------
Confidence 23345888 8999999998876 3455777776654321
Q ss_pred eecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCc
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMD 264 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 264 (409)
..+...+...+|||||+.|+.+.++.|++|++. .+...+.. ..
T Consensus 108 ------------------------------~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~-~~~~~~lt------~~ 150 (740)
T 4a5s_A 108 ------------------------------ERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP-NLPSYRIT------WT 150 (740)
T ss_dssp ------------------------------SCCCTTEEEEEECSSTTCEEEEETTEEEEESST-TSCCEECC------SC
T ss_pred ------------------------------ccCCCcceeeEECCCCCEEEEEECCeEEEEECC-CCceEEEc------CC
Confidence 345667899999999999999877899999998 44443321 22
Q ss_pred CccCc-----------------eEEEEEeCCCCCEEEEEeCCC------------------------------------e
Q 015290 265 DLTEV-----------------ITSAEFHPIYCNLLAYSSSRG------------------------------------F 291 (409)
Q Consensus 265 ~~~~~-----------------v~~~~~~p~~~~~l~s~s~dg------------------------------------~ 291 (409)
++... ..++.||||| +.||.++.|. .
T Consensus 151 g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~ 229 (740)
T 4a5s_A 151 GKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK 229 (740)
T ss_dssp CBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE
T ss_pred CCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE
Confidence 22222 2358999999 9888876432 2
Q ss_pred EEEEeCCC---ccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee----c-CeEEEEEccCCCc---
Q 015290 292 VRLVDMRQ---SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD----Y-MNLKLWDIRMDST--- 360 (409)
Q Consensus 292 i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~----~-~~v~iwd~~~~~~--- 360 (409)
|++||+.+ ++.. . ...+.. ...+.+|...+..++|+|||++++... . ..|++||+.+ ++
T Consensus 230 l~v~d~~~~~~~~~~-~-~~~l~~-------~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t-g~~~~ 299 (740)
T 4a5s_A 230 FFVVNTDSLSSVTNA-T-SIQITA-------PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE-SSGRW 299 (740)
T ss_dssp EEEEETTSCCSSSCC-C-EEEECC-------CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET-TTTEE
T ss_pred EEEEECCCCCCCCcc-e-EEEecC-------CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC-Ccccc
Confidence 44555544 3100 0 000000 000113567899999999999776542 2 4799999986 54
Q ss_pred -c--eEEE--ecccCcccccccccCCCCccceeeEEEcCCCCeEE-Eccc
Q 015290 361 -P--VATF--KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA-TGSY 404 (409)
Q Consensus 361 -~--~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-s~s~ 404 (409)
+ +..+ .++...+.. ......+|+|||+.|+ ..+.
T Consensus 300 ~~~~~~~l~~~~~~~~v~~----------~~~~~p~fspDG~~l~~~~s~ 339 (740)
T 4a5s_A 300 NCLVARQHIEMSTTGWVGR----------FRPSEPHFTLDGNSFYKIISN 339 (740)
T ss_dssp EECGGGCEEEECSSSCSSS----------SSCCCCEECTTSSEEEEEEEC
T ss_pred ceeEEEEeeeccCCceEcc----------CcCCCceEcCCCCEEEEEEEc
Confidence 1 1122 345444310 0013689999999877 5553
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.83 E-value=1.2e-17 Score=148.98 Aligned_cols=245 Identities=8% Similarity=0.009 Sum_probs=145.5
Q ss_pred cceEEEEEEecCCCCEEEEEeCC----CeEEEEEcCC--ceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 114 EKINRVRWCAAPNGSMFILSTND----KTIKLWKVRD--QKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d----~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..+..++| +|+|++|++++.+ +.|.+|++.. +........... ......... ++.+++.
T Consensus 50 ~~p~~l~~--spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~-----------~~~p~~~~~--dg~~l~~ 114 (361)
T 3scy_A 50 ANPSYLIP--SADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM-----------GADPCYLTT--NGKNIVT 114 (361)
T ss_dssp SCCCSEEE--CTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS-----------SSCEEEEEE--CSSEEEE
T ss_pred CCCceEEE--CCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC-----------CCCcEEEEE--CCCEEEE
Confidence 57788999 8999999999876 7999999875 444433221100 001111111 2233332
Q ss_pred ccccccceeEEEecCCcccceee-eee-cc--------ccccceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCc----
Q 015290 188 LEWTENMATKIANVGNSVHARCQ-KVY-PH--------AHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQ---- 251 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~-~~~-~~--------~~~~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~---- 251 (409)
+. ..++.+.+|++........+ ... .. .+...+.+++|+|+|++++++ .++.|.+|++.....
T Consensus 115 ~~-~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~ 193 (361)
T 3scy_A 115 AN-YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNK 193 (361)
T ss_dssp EE-TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred EE-CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccc
Confidence 22 13678999998753221111 111 01 122345789999999977665 689999999873331
Q ss_pred e-eeee-ecCCCcCcCccCceEEEEEeCCCCCEEEEEe-CCCeEEEEeCCCccccccccccccccccccCCccccccccc
Q 015290 252 C-FNIV-DMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 252 ~-~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
. +... ..... ...+...+..++|+|+| +++++++ .++.|.+||+.+++... ...+.. ...+..
T Consensus 194 ~~l~~~~~~~~~-~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~~~g~~~~--~~~~~~----------~~~~~~ 259 (361)
T 3scy_A 194 EKFLTKGTPEAF-KVAPGSGPRHLIFNSDG-KFAYLINEIGGTVIAFRYADGMLDE--IQTVAA----------DTVNAQ 259 (361)
T ss_dssp CCCEEEEEEEEE-ECCTTCCEEEEEECTTS-SEEEEEETTTCEEEEEEEETTEEEE--EEEEES----------CSSCCC
T ss_pred cceeecccccce-ecCCCCCCeEEEEcCCC-CEEEEEcCCCCeEEEEEecCCceEE--eEEEec----------CCCCCC
Confidence 1 1100 00000 12234557899999999 8776666 68999999998654210 111111 011123
Q ss_pred ceeeeEeccCCCEEEEee---cCeEEEEEccC-CCc--ceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 329 SISDIKFANDGQHLLSRD---YMNLKLWDIRM-DST--PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~sg~---~~~v~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
....++|+|||++|+++. ++.|.+|++.. .++ .+..+.. .... ..++|+|||++|+++
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~---------------~~~~~spdg~~l~~~ 323 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHP---------------RNFIITPNGKYLLVA 323 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCC---------------CEEEECTTSCEEEEE
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCC---------------ceEEECCCCCEEEEE
Confidence 457899999999887653 37899999962 133 3333433 2221 589999999988887
Q ss_pred cc
Q 015290 403 SY 404 (409)
Q Consensus 403 s~ 404 (409)
+.
T Consensus 324 ~~ 325 (361)
T 3scy_A 324 CR 325 (361)
T ss_dssp ET
T ss_pred EC
Confidence 73
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=6.1e-17 Score=144.65 Aligned_cols=252 Identities=9% Similarity=-0.024 Sum_probs=154.0
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcC-CceeeeeeccCCCcccccccccccccCceeccCCCCCc--eeeccc-
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVR-DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA--HGYHLE- 189 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 189 (409)
..+..++| +|+|++|++++.+ .|.+|++. +++......... .+.......++++. +++.+.
T Consensus 40 ~~~~~~a~--spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~------------~g~~~~~~~spdg~~l~~~~~~~ 104 (365)
T 1jof_A 40 EPISWMTF--DHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI------------GGHPRANDADTNTRAIFLLAAKQ 104 (365)
T ss_dssp CCCSEEEE--CTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC------------CSSGGGGCTTSCCEEEEEEECSS
T ss_pred CCCcEEEE--CCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeec------------CCCCccEEECCCCCEEEEEEecC
Confidence 36788999 7999999998887 99999997 666543322110 01122244455555 233332
Q ss_pred -----cc-----ccceeEEEecCCc-ccceeeeeeccccccceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeee
Q 015290 190 -----WT-----ENMATKIANVGNS-VHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIV 256 (409)
Q Consensus 190 -----~~-----~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~ 256 (409)
.. .++.+.+|++... .....+..+...+...+.+++|+|+|++++++ .++.|.+|++...++.....
T Consensus 105 ~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~ 184 (365)
T 1jof_A 105 PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVG 184 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred CcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEee
Confidence 11 4778999999642 21122222211245678999999999988876 57899999997223322111
Q ss_pred ecCCCcCcCccCceEEEEEeCCCCCEEEEEe-CCCeEEEEeCC--Cccccc--cccccccccccccCCccccccccc---
Q 015290 257 DMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMR--QSALCD--HSARILRDAAESHGSKSFFTEIIA--- 328 (409)
Q Consensus 257 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i~iwd~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--- 328 (409)
.. ....|...+..++|+|+| +++++++ .++.|.+|++. +++... ..+..+.. .+.+|..
T Consensus 185 ~~---~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~---------~~~g~~~~~~ 251 (365)
T 1jof_A 185 SV---DAPDPGDHPRWVAMHPTG-NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP---------GIPDRDPETG 251 (365)
T ss_dssp EE---ECSSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT---------TCCCBCTTTS
T ss_pred eE---ecCCCCCCCCEeEECCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC---------CcCCcccccc
Confidence 00 012235668999999999 8877766 47899999875 343210 00111111 0112222
Q ss_pred ---ceeeeE-eccCCCEEEEee-c-C-----eEEEEEccCCCcceEE---EecccCcccccccccCCCCccceeeEEEcC
Q 015290 329 ---SISDIK-FANDGQHLLSRD-Y-M-----NLKLWDIRMDSTPVAT---FKIHEHLRPKLCDLYNNDSIFDKFECSVSG 394 (409)
Q Consensus 329 ---~i~~~~-~s~~g~~l~sg~-~-~-----~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 394 (409)
.+..++ |+|||++|++++ . + .|.+|++...++.... ...+.... ..++|+|
T Consensus 252 ~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~---------------~~~a~sp 316 (365)
T 1jof_A 252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGG---------------HSNAVSP 316 (365)
T ss_dssp SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCT---------------TCCCEEE
T ss_pred cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCc---------------ccceecC
Confidence 578899 999999988764 2 4 8999999633554332 22222222 4799999
Q ss_pred ---CCCeEEEcccC-CCC
Q 015290 395 ---DGLHFATGSYR-RDN 408 (409)
Q Consensus 395 ---dg~~l~s~s~d-g~i 408 (409)
||++|++++.+ ++|
T Consensus 317 ~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 317 CPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp CTTCTTEEEEECSSSCEE
T ss_pred CCcCCCEEEEEEcCCCeE
Confidence 89999988765 543
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=6e-18 Score=149.25 Aligned_cols=248 Identities=10% Similarity=0.073 Sum_probs=165.4
Q ss_pred cEEEEEECCCCCEEE-EEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeec-CCCccccccccce
Q 015290 34 IVSAIEFDKTGDYLA-VGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQ-SHEPEFDYLKSLE 111 (409)
Q Consensus 34 ~v~~v~~~~~~~~la-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~ 111 (409)
.+..++|+|+|++++ ++..++.|.+||+.+++. +..+. ++.. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~---------------------------~~~~~~~~~~--------~ 79 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET---------------------------LGRIDLSTPE--------E 79 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE---------------------------EEEEECCBTT--------E
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe---------------------------EeeEEcCCcc--------c
Confidence 478899999998664 555678999999987663 22222 1100 0
Q ss_pred eccceEEEEEEecCCCCEEEEEe------------CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCC
Q 015290 112 IEEKINRVRWCAAPNGSMFILST------------NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNP 179 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (409)
+...+.+++| +|+|+++++++ .++.|.+||+.+++........ .......++
T Consensus 80 ~~~~~~~~~~--s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--------------~~~~~~~~s 143 (337)
T 1pby_B 80 RVKSLFGAAL--SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--------------RQITMLAWA 143 (337)
T ss_dssp EEECTTCEEE--CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--------------SSCCCEEEC
T ss_pred ccccccceEE--CCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--------------CCcceeEEC
Confidence 0135678999 79999998886 6799999999988765544321 112222344
Q ss_pred CCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe--cCC------------------
Q 015290 180 PSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDL------------------ 239 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~--~d~------------------ 239 (409)
+++..++.+ ++.+.+||+.+. +....+ ..+.. ...+.|+|+++.++.+ .++
T Consensus 144 ~dg~~l~~~----~~~i~~~d~~~~---~~~~~~-~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1pby_B 144 RDGSKLYGL----GRDLHVMDPEAG---TLVEDK-PIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214 (337)
T ss_dssp TTSSCEEEE----SSSEEEEETTTT---EEEEEE-CSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred CCCCEEEEe----CCeEEEEECCCC---cEeeee-ecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccc
Confidence 455544444 468999999763 333333 22210 1123789998877654 333
Q ss_pred -----eEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccc
Q 015290 240 -----RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAA 314 (409)
Q Consensus 240 -----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 314 (409)
.|.+||+. .++.. .+. +..+...+.+++|+|++ ++++++ ++.|.+||+.+++.. ..+..
T Consensus 215 ~~~~~~v~~~d~~-~~~~~-~~~-----~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~~~~~----~~~~~-- 278 (337)
T 1pby_B 215 TAYRTGLLTMDLE-TGEMA-MRE-----VRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEKNASI----KRVPL-- 278 (337)
T ss_dssp GGEEEEEEEEETT-TCCEE-EEE-----EEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTTTEEE----EEEEC--
T ss_pred cccccceEEEeCC-CCCce-Eee-----cCCCCCceeeEEECCCC-CEEEEe--CCeEEEEECCCCcCc----ceecC--
Confidence 46889988 44443 221 34455678899999999 888877 789999999886541 22222
Q ss_pred cccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccC
Q 015290 315 ESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEH 370 (409)
Q Consensus 315 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~ 370 (409)
...+.+++|+|+|++|++++. +.|++||+.+ ++.+..+..+..
T Consensus 279 ------------~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~-~~~~~~~~~~~~ 322 (337)
T 1pby_B 279 ------------PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET-LEKKGQVDLPGN 322 (337)
T ss_dssp ------------SSCCCEEEECTTSCEEEEESBSSEEEEEETTT-CCEEEEEECGGG
T ss_pred ------------CCceeeEEECCCCCEEEEEcCCCcEEEEECcC-CcEEEEEEcCCC
Confidence 235788999999998888764 9999999986 788888876544
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=6.6e-18 Score=164.43 Aligned_cols=259 Identities=12% Similarity=0.142 Sum_probs=166.7
Q ss_pred cCCCcEEEEEECCCCCEEEEEecCCeEEEEeccC-----CcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVG-----GKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEF 104 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 104 (409)
.+...+.+++|+|||++||++ .++.|.+|++.+ ++. ......+...+
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~---------------------------~~~~~~~~~~~ 169 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA---------------------------IAVTIDGTETL 169 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC---------------------------EESCSCCBTTE
T ss_pred CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc---------------------------EEeccCCCCCe
Confidence 356678889999999999985 689999999987 542 11111111000
Q ss_pred c---ccccceeccceEEEEEEecCCCCEEEEEe---------------------------------CCCeEEEEEcCCce
Q 015290 105 D---YLKSLEIEEKINRVRWCAAPNGSMFILST---------------------------------NDKTIKLWKVRDQK 148 (409)
Q Consensus 105 ~---~~~~~~~~~~v~~l~~~~s~~~~~l~s~~---------------------------------~d~~i~iwd~~~~~ 148 (409)
. .+.. +....+.++.| +|||++|++++ .+..|.+||+.+++
T Consensus 170 ~~g~~~~~-ee~~~~~~~~~--SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~ 246 (706)
T 2z3z_A 170 VYGQAVHQ-REFGIEKGTFW--SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK 246 (706)
T ss_dssp EESSCCGG-GCTTCCCSEEE--CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred Ecccchhh-hhcCCCceEEE--CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence 0 0000 00034688999 89999999987 45789999999887
Q ss_pred eeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc---ccceeEEEecCCcccceeeeeecccccc---cee
Q 015290 149 VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT---ENMATKIANVGNSVHARCQKVYPHAHDF---NIN 222 (409)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~v~ 222 (409)
........ .....+..+.+++++..++.+... ....+.+||+.+......+.. ..+.. .+.
T Consensus 247 ~~~~~~~~-----------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~--~~~~~~~~~~~ 313 (706)
T 2z3z_A 247 TVYLQTGE-----------PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV--ETDKHYVEPLH 313 (706)
T ss_dssp EEECCCCS-----------CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE--EECSSCCCCCS
T ss_pred eEeeccCC-----------CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE--ccCCCeECccC
Confidence 65432110 112234556677777766665431 224899999987422121111 11221 246
Q ss_pred EEEeCC--CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEE-EEEeCCCCCEEEEE-eCCC----eEE
Q 015290 223 SISNNS--DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS-AEFHPIYCNLLAYS-SSRG----FVR 293 (409)
Q Consensus 223 ~l~~~~--~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~s~-s~dg----~i~ 293 (409)
.++|+| +|++++++ .++.+.||++...+..... +..+...+.. ++|+|++ +.|+.+ +.++ .|.
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~-------l~~~~~~v~~~~~~spdg-~~l~~~~~~~~~~~~~l~ 385 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQ-------VTKGEWEVTNFAGFDPKG-TRLYFESTEASPLERHFY 385 (706)
T ss_dssp CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEE-------CCCSSSCEEEEEEECTTS-SEEEEEESSSCTTCBEEE
T ss_pred CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEe-------cCCCCeEEEeeeEEcCCC-CEEEEEecCCCCceEEEE
Confidence 789999 99999888 8999999988744554544 4556666776 7999999 666554 4444 677
Q ss_pred EEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe-ec----CeEEEEEccCCCc
Q 015290 294 LVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY----MNLKLWDIRMDST 360 (409)
Q Consensus 294 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg-~~----~~v~iwd~~~~~~ 360 (409)
.||+.+++. ..+.. ...+..++|+|||++|+.. ++ +.|++||+.. ++
T Consensus 386 ~~d~~~~~~-----~~l~~--------------~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~-~~ 437 (706)
T 2z3z_A 386 CIDIKGGKT-----KDLTP--------------ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK-GS 437 (706)
T ss_dssp EEETTCCCC-----EESCC--------------SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS-CE
T ss_pred EEEcCCCCc-----eeccC--------------CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC-Ce
Confidence 777766542 22222 3468899999999988865 32 5699999975 44
No 159
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=4.7e-16 Score=133.94 Aligned_cols=255 Identities=12% Similarity=0.156 Sum_probs=172.6
Q ss_pred cccceeeehhccCCCCCccccCCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCC
Q 015290 10 ASLEWKCSQAFGERNPDEELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHP 89 (409)
Q Consensus 10 ~~~~w~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (409)
....|.+...|+.+ ....++-..+.+++++++|+++++...++.|.+||.....
T Consensus 9 ~~~~~~~~~~~g~~--g~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~------------------------ 62 (286)
T 1q7f_A 9 KRQRMIYHCKFGEF--GVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRF------------------------ 62 (286)
T ss_dssp CCEEECEEEEECCB--SSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCE------------------------
T ss_pred ccceeEEEEeccCC--CCCCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcE------------------------
Confidence 33456676677664 3334567789999999999988888889999999976432
Q ss_pred ceeeeeeec------CCCccccccccceeccceEEEEEEecCCCCEEEEEeC-CCeEEEEEcCCceeeeeeccCCCcccc
Q 015290 90 EYRYKTEFQ------SHEPEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTN-DKTIKLWKVRDQKVKKIKEMDHFPFVS 162 (409)
Q Consensus 90 ~~~~~~~~~------~h~~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~ 162 (409)
+..+. +|. ..+..+++. .+++.++++... ++.|.+||. +++......
T Consensus 63 ----~~~~~~~~~~~~~~------------~~p~~i~~~-~~~g~l~v~~~~~~~~i~~~d~-~g~~~~~~~-------- 116 (286)
T 1q7f_A 63 ----KFQFGECGKRDSQL------------LYPNRVAVV-RNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFG-------- 116 (286)
T ss_dssp ----EEEECCBSSSTTCB------------SSEEEEEEE-TTTTEEEEEECGGGCEEEEECT-TSCEEEEEC--------
T ss_pred ----EEEecccCCCcccc------------cCceEEEEE-cCCCeEEEEcCCCCCEEEEECC-CCcEEEEec--------
Confidence 12221 222 468889983 256655555533 789999994 443322111
Q ss_pred cccccccccCceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeE
Q 015290 163 SENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRI 241 (409)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i 241 (409)
..+...+..++++|+++.+++. .++.|
T Consensus 117 ----------------------------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i 144 (286)
T 1q7f_A 117 ----------------------------------------------------ATILQHPRGVTVDNKGRIIVVECKVMRV 144 (286)
T ss_dssp ----------------------------------------------------TTTCSCEEEEEECTTSCEEEEETTTTEE
T ss_pred ----------------------------------------------------CccCCCceEEEEeCCCCEEEEECCCCEE
Confidence 1233457889999999988887 78999
Q ss_pred EEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcc
Q 015290 242 NLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKS 321 (409)
Q Consensus 242 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (409)
.+||.. +..+..+. ...+...+..++++|+| +++++.+.++.|++||...... ..+..
T Consensus 145 ~~~~~~--g~~~~~~~-----~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~~-----~~~~~--------- 202 (286)
T 1q7f_A 145 IIFDQN--GNVLHKFG-----CSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYEGQYL-----RQIGG--------- 202 (286)
T ss_dssp EEECTT--SCEEEEEE-----CTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETTCCEE-----EEESC---------
T ss_pred EEEcCC--CCEEEEeC-----CCCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCCCCEE-----EEEcc---------
Confidence 999975 44444421 12344568999999999 8888888899999999754321 22222
Q ss_pred cccccccceeeeEeccCCCEEEEeec-C-eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeE
Q 015290 322 FFTEIIASISDIKFANDGQHLLSRDY-M-NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHF 399 (409)
Q Consensus 322 ~~~~~~~~i~~~~~s~~g~~l~sg~~-~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 399 (409)
.++...+..++++++|+++++... + .|.+||.. ++.+..+..+.... .+.+++++|+|+++
T Consensus 203 --~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~--g~~~~~~~~~~~~~-------------~~~~i~~~~~g~l~ 265 (286)
T 1q7f_A 203 --EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD--GQLISALESKVKHA-------------QCFDVALMDDGSVV 265 (286)
T ss_dssp --TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--SCEEEEEEESSCCS-------------CEEEEEEETTTEEE
T ss_pred --CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC--CCEEEEEcccCCCC-------------cceeEEECCCCcEE
Confidence 011245788999999998887754 5 99999964 67777776554321 01589999999877
Q ss_pred EEcccCCCC
Q 015290 400 ATGSYRRDN 408 (409)
Q Consensus 400 ~s~s~dg~i 408 (409)
++ +.|++|
T Consensus 266 vs-~~~~~v 273 (286)
T 1q7f_A 266 LA-SKDYRL 273 (286)
T ss_dssp EE-ETTTEE
T ss_pred EE-CCCCeE
Confidence 77 456654
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=5e-18 Score=161.44 Aligned_cols=229 Identities=11% Similarity=0.036 Sum_probs=151.3
Q ss_pred cceEEEEEEecCCCCEEEEEeC-CCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc-c
Q 015290 114 EKINRVRWCAAPNGSMFILSTN-DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW-T 191 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 191 (409)
.+|.+++| +|||+.|++++. |++++||++.+++...+.... ........++++ .+++.... .
T Consensus 22 ~~~~~~~~--~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~-------------~~~~~~~~~spd-~~l~~~~~~~ 85 (582)
T 3o4h_A 22 VEKYSLQG--VVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREP-------------INSVLDPHYGVG-RVILVRDVSK 85 (582)
T ss_dssp SCEEEEEE--EETTTEEEEEEEETTEEEEEEEETTEEEECCSSC-------------CSEECEECTTCS-EEEEEEECST
T ss_pred cchheeec--CCCCCeEEEEEccCCceeEEEEcCCCcEeeeccc-------------ccccccccCCCC-eEEEEeccCC
Confidence 57999999 789999999876 999999999777665543211 112344556666 55554443 2
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCe--EEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCc
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCET--FVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~--l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 269 (409)
.+...++|.+.....+...+ + ... ..+...+|+|+++. ++++.++.+.+||+. ++...... .+..
T Consensus 86 g~~~~~l~~~~~~~~g~~~~-l-~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~-~g~~~~l~--------~~~~- 152 (582)
T 3o4h_A 86 GAEQHALFKVNTSRPGEEQR-L-EAV-KPMRILSGVDTGEAVVFTGATEDRVALYALD-GGGLRELA--------RLPG- 152 (582)
T ss_dssp TSCCEEEEEEETTSTTCCEE-C-TTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEE-TTEEEEEE--------EESS-
T ss_pred CCcceEEEEEeccCCCcccc-c-cCC-CCceeeeeCCCCCeEEEEecCCCCceEEEcc-CCcEEEee--------cCCC-
Confidence 24455666554311111112 1 111 22345678888754 334455555699998 55544431 1222
Q ss_pred eEEEEEeCCCCCEEEEEeCC----CeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 270 ITSAEFHPIYCNLLAYSSSR----GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
.+++|+||| ++|++++.+ +.|++||+.+++. ..+.. |...+..++|||||++|+++
T Consensus 153 -~~~~~spDG-~~la~~~~~~~~~~~i~~~d~~~g~~-----~~l~~-------------~~~~~~~~~~SpDG~~l~~~ 212 (582)
T 3o4h_A 153 -FGFVSDIRG-DLIAGLGFFGGGRVSLFTSNLSSGGL-----RVFDS-------------GEGSFSSASISPGMKVTAGL 212 (582)
T ss_dssp -CEEEEEEET-TEEEEEEEEETTEEEEEEEETTTCCC-----EEECC-------------SSCEEEEEEECTTSCEEEEE
T ss_pred -ceEEECCCC-CEEEEEEEcCCCCeEEEEEcCCCCCc-----eEeec-------------CCCccccceECCCCCEEEEc
Confidence 789999999 999988776 7899999988763 22222 24678999999999999966
Q ss_pred ec-C--eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEE--------EcCCCCeEEEcccCCCC
Q 015290 346 DY-M--NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECS--------VSGDGLHFATGSYRRDN 408 (409)
Q Consensus 346 ~~-~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~spdg~~l~s~s~dg~i 408 (409)
+. + .|++||+.+ ++.. .+.++...+ ..++ |+|||.++++++.||++
T Consensus 213 ~~~~~~~i~~~d~~~-~~~~-~~~~~~~~~---------------~~~~~~~~~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 213 ETAREARLVTVDPRD-GSVE-DLELPSKDF---------------SSYRPTAITWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp ECSSCEEEEEECTTT-CCEE-ECCCSCSHH---------------HHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred cCCCeeEEEEEcCCC-CcEE-EccCCCcCh---------------hhhhhccccceeEcCCCcEEEEEEcCCcE
Confidence 54 6 899999985 5555 555555443 2455 99999888999988864
No 161
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=9.1e-17 Score=142.70 Aligned_cols=235 Identities=8% Similarity=-0.020 Sum_probs=159.5
Q ss_pred cceEEEEEEecCCCCEEEEEeC-------CCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 114 EKINRVRWCAAPNGSMFILSTN-------DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
..+..++| +|+++++++++. ++.|.+||..+++......... .......++++..++
T Consensus 41 ~~~~~~~~--s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--------------~~~~~~~s~dg~~l~ 104 (353)
T 3vgz_A 41 KGAYEMAY--SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--------------KPFGATINNTTQTLW 104 (353)
T ss_dssp SSEEEEEE--ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--------------CCCSEEEETTTTEEE
T ss_pred cCccceEE--CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--------------CcceEEECCCCCEEE
Confidence 67889999 789998888764 5689999999887766544221 112222333333332
Q ss_pred cccccccceeEEEecCCcccceeeeeecccccc--------ceeEEEeCCCCCeEEEe---cCCeEEEEEccCCCceeee
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDF--------NINSISNNSDCETFVSA---DDLRINLWNLEISDQCFNI 255 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------~v~~l~~~~~~~~l~~~---~d~~i~lwd~~~~~~~~~~ 255 (409)
.... .++.+.+||.++.. .+..+...... .+.+++|+|++++++++ .++.|.+||.. .++....
T Consensus 105 v~~~-~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~-~~~~~~~ 179 (353)
T 3vgz_A 105 FGNT-VNSAVTAIDAKTGE---VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG-NIKLKTA 179 (353)
T ss_dssp EEET-TTTEEEEEETTTCC---EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT-TTEEEEE
T ss_pred EEec-CCCEEEEEeCCCCe---eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC-CCceEEE
Confidence 2221 25689999997643 33332111111 26889999999987765 37889999998 6666655
Q ss_pred eecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEe
Q 015290 256 VDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKF 335 (409)
Q Consensus 256 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 335 (409)
+ ..+...+..++|+|++ +++++++.++.|.+||..+++.. ..+.... .++...+..++|
T Consensus 180 ~-------~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~~~----~~~~~~~---------~~~~~~~~~~~~ 238 (353)
T 3vgz_A 180 I-------QNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNKIL----SRKKLLD---------DGKEHFFINISL 238 (353)
T ss_dssp E-------CCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTEEE----EEEECCC---------SSSCCCEEEEEE
T ss_pred e-------cCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCeEE----EEEEcCC---------CCCCcccceEEE
Confidence 3 3334457889999999 88998999999999999887642 2222100 112346788999
Q ss_pred ccCCCEEEEee-c-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc-cCCCC
Q 015290 336 ANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YRRDN 408 (409)
Q Consensus 336 s~~g~~l~sg~-~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s-~dg~i 408 (409)
+|+|+++++++ + +.|.+||+.+ ++.+..+..... ..++|+|||++|+.++ .++.|
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~-----------------~~~~~s~dg~~l~v~~~~~~~v 296 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRN-GNILAKVAAPES-----------------LAVLFNPARNEAYVTHRQAGKV 296 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTT-CCEEEEEECSSC-----------------CCEEEETTTTEEEEEETTTTEE
T ss_pred CCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEEcCCC-----------------ceEEECCCCCEEEEEECCCCeE
Confidence 99999887664 4 9999999986 777777765443 2799999999665544 55543
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=2.4e-16 Score=139.77 Aligned_cols=223 Identities=7% Similarity=0.080 Sum_probs=139.0
Q ss_pred CCCcEEEEEECCCCCEEEEEe-cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGD-RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+...+..++|+|||++|++++ .++.|.+|++..... .+.+..+...... +. .
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~------------------------~~~~~~~~~~~~~--p~-~ 136 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA------------------------LTLTDTVQHSGHG--PR-P 136 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC------------------------EEEEEEEECCCCC--SS-T
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC------------------------eeecceeecCCCC--CC-c
Confidence 566788999999999998888 779999999963221 0112222111000 00 0
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcC-CceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVR-DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
......+.+++| +|+|+++++...++.|.+|++. +++......
T Consensus 137 ~~~~~~~~~~~~--spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~---------------------------------- 180 (347)
T 3hfq_A 137 EQDGSHIHYTDL--TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSV---------------------------------- 180 (347)
T ss_dssp TCSSCCEEEEEE--CTTSCEEEEETTTTEEEEEEECTTSCEEEEEE----------------------------------
T ss_pred cccCCCceEEEE--CCCCcEEEEeCCCCEEEEEEECCCCcEEEeee----------------------------------
Confidence 000145889999 7999966666778899999998 443322110
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEE-e-cCCeEEEEEccC-CCce--eeeeecCCCcC
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS-A-DDLRINLWNLEI-SDQC--FNIVDMKPSNM 263 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~-~d~~i~lwd~~~-~~~~--~~~~~~~~~~~ 263 (409)
+.......+..++|+|+|+++++ + .++.|.+|++.. .+.. ...+...+...
T Consensus 181 ------------------------~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 181 ------------------------LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp ------------------------EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred ------------------------EEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 00112234678999999997666 4 789999999883 1322 11211111001
Q ss_pred cCccCceEEEEEeCCCCCEE-EEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEE
Q 015290 264 DDLTEVITSAEFHPIYCNLL-AYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 342 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 342 (409)
. ....+..++|+|+| ++| ++...++.|.+||+..... ...... +..+...+..++|+|||++|
T Consensus 237 ~-~~~~~~~i~~spdG-~~l~v~~~~~~~v~v~~~~~~g~----~~~~~~----------~~~~~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 237 T-AHNGAAAIRLSHDG-HFLYVSNRGYNTLAVFAVTADGH----LTLIQQ----------ISTEGDFPRDFDLDPTEAFV 300 (347)
T ss_dssp C-SCCEEEEEEECTTS-CEEEEEEETTTEEEEEEECGGGC----EEEEEE----------EECSSSCCCEEEECTTSSEE
T ss_pred C-CCCcceeEEECCCC-CEEEEEeCCCCEEEEEEECCCCc----EEEeEE----------EecCCCCcCeEEECCCCCEE
Confidence 1 12458899999999 766 5666789999999874211 111111 11123457899999999998
Q ss_pred EEee-c-CeEEEEEcc
Q 015290 343 LSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 343 ~sg~-~-~~v~iwd~~ 356 (409)
++++ + +.|.+|+++
T Consensus 301 ~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 301 VVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEETTTTEEEEEEEC
T ss_pred EEEEcCCCcEEEEEEe
Confidence 8875 4 999999654
No 163
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=2.9e-17 Score=148.33 Aligned_cols=291 Identities=11% Similarity=0.030 Sum_probs=169.3
Q ss_pred cEEEEEECCCCCEEEEEecC---CeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 34 IVSAIEFDKTGDYLAVGDRG---GRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
.+.+++|+|||++||..... ..|.+||+.+++. ..+..+..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~----------------------------~~l~~~~~-------- 80 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA----------------------------VQLTEGKG-------- 80 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE----------------------------EECCCSSC--------
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE----------------------------EEeecCCC--------
Confidence 36788999999998877543 3688888877652 12222220
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCc--ccccccccccccC----ceeccCCCCCce
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFP--FVSSENTLLAEKN----FMNEHNPPSFAH 184 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~ 184 (409)
.....+.| +|||+.|+.++.++.|.+||+.+++...+....... .-..+.+...... .....+++++..
T Consensus 81 ---~~~~~~~~--spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~ 155 (396)
T 3c5m_A 81 ---DNTFGGFI--STDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSW 155 (396)
T ss_dssp ---BCTTTCEE--CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred ---CccccceE--CCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcc
Confidence 12233778 899999999999999999999988765554322110 0000000000000 000233444444
Q ss_pred eecccc---cccceeEEEecCCcccceeeeeeccccccceeEEEeCC-CCCeEEEe-cC------CeEEEEEccCCCcee
Q 015290 185 GYHLEW---TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DD------LRINLWNLEISDQCF 253 (409)
Q Consensus 185 ~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~-~d------~~i~lwd~~~~~~~~ 253 (409)
++.... ..+..+.+||+.+.. .... ..+...+..+.|+| +++.|+.. .+ ..|.+||+. .+...
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~---~~~~--~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-~~~~~ 229 (396)
T 3c5m_A 156 EKFAEFYHTNPTCRLIKVDIETGE---LEVI--HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED-GSNVR 229 (396)
T ss_dssp HHHHHHHHTCCCEEEEEEETTTCC---EEEE--EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT-SCCCE
T ss_pred eeeeeeccCCCcceEEEEECCCCc---EEee--ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC-CCcee
Confidence 443321 235588999987632 2222 24566788999999 78777664 32 468888886 33322
Q ss_pred eeeecCCCcCcCc-cCceEEEEEeCCCCCEEEEEeCC-----CeEEEEeCCCccccccccccccccccccCCcccccccc
Q 015290 254 NIVDMKPSNMDDL-TEVITSAEFHPIYCNLLAYSSSR-----GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 327 (409)
Q Consensus 254 ~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (409)
.. .... ...+..++|+|+| +.|+.++.+ +.|.+||+.+++. ..+.. .
T Consensus 230 ~l-------~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~~-----~~l~~--------------~ 282 (396)
T 3c5m_A 230 KI-------KEHAEGESCTHEFWIPDG-SAMAYVSYFKGQTDRVIYKANPETLEN-----EEVMV--------------M 282 (396)
T ss_dssp ES-------SCCCTTEEEEEEEECTTS-SCEEEEEEETTTCCEEEEEECTTTCCE-----EEEEE--------------C
T ss_pred Ee-------eccCCCccccceEECCCC-CEEEEEecCCCCccceEEEEECCCCCe-----EEeee--------------C
Confidence 22 1211 2357889999999 776666543 4599999987653 11111 0
Q ss_pred cceeeeEecc-CCCEEEEee-----------------cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceee
Q 015290 328 ASISDIKFAN-DGQHLLSRD-----------------YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFE 389 (409)
Q Consensus 328 ~~i~~~~~s~-~g~~l~sg~-----------------~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 389 (409)
.... +.|+| ||+++++++ +..|++||+.. ++. ..+..+...... +..++...+..
T Consensus 283 ~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~-~~~-~~l~~~~~~~~~----~~~~~~~~~~~ 355 (396)
T 3c5m_A 283 PPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA-KSA-QKLCKHSTSWDV----LDGDRQITHPH 355 (396)
T ss_dssp CSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT-TBC-CEEEECCCCCCC----BTTBSSTTCCC
T ss_pred CCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc-Cce-EEccCCCCcccc----ccccccCCCCC
Confidence 0122 88999 999888642 27899999975 443 344444331000 00000001147
Q ss_pred EEEcCCCCeEEEcccC
Q 015290 390 CSVSGDGLHFATGSYR 405 (409)
Q Consensus 390 ~~~spdg~~l~s~s~d 405 (409)
++|+|||+.|+.++.+
T Consensus 356 ~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 356 PSFTPNDDGVLFTSDF 371 (396)
T ss_dssp CEECTTSSEEEEEECT
T ss_pred ceEccCCCeEEEEecC
Confidence 8999999998877653
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=4.2e-17 Score=159.10 Aligned_cols=243 Identities=9% Similarity=0.045 Sum_probs=151.3
Q ss_pred EEEEEECCCCCEEEEEec---------CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccc
Q 015290 35 VSAIEFDKTGDYLAVGDR---------GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFD 105 (409)
Q Consensus 35 v~~v~~~~~~~~la~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 105 (409)
|.+++|||||++||+++. ++.|++||+.+++.. ....+ .
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~-------------------------~~~~l---~---- 109 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV-------------------------RGNEL---P---- 109 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-------------------------CSSCC---C----
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc-------------------------cceec---C----
Confidence 889999999999999876 789999999887620 00011 1
Q ss_pred ccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 106 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..+..++| ||||+.|+++. |+.|++|++.+++...+......
T Consensus 110 --------~~~~~~~~--SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~--------------------------- 151 (719)
T 1z68_A 110 --------RPIQYLCW--SPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRE--------------------------- 151 (719)
T ss_dssp --------SSBCCEEE--CSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBT---------------------------
T ss_pred --------cccccceE--CCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCc---------------------------
Confidence 46788999 89999999886 78999999988765443210000
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccc---------cceeEEEeCCCCCeEEEe-cCC----------------
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHD---------FNINSISNNSDCETFVSA-DDL---------------- 239 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~v~~l~~~~~~~~l~~~-~d~---------------- 239 (409)
...+ .++. ....+++|+|||++|+++ .|.
T Consensus 152 ------------------------~~v~-~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~ 206 (719)
T 1z68_A 152 ------------------------NKIF-NGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQY 206 (719)
T ss_dssp ------------------------TTEE-ESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSS
T ss_pred ------------------------CCeE-cccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 0000 1221 223579999999999987 442
Q ss_pred ------------------eEEEEEccCCCceeeeeecC-CCcCcCccCceEEEEEeCCCCCEEEEEeCC----CeEEEEe
Q 015290 240 ------------------RINLWNLEISDQCFNIVDMK-PSNMDDLTEVITSAEFHPIYCNLLAYSSSR----GFVRLVD 296 (409)
Q Consensus 240 ------------------~i~lwd~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d----g~i~iwd 296 (409)
.|++||+. .+.....+.+. +..+.+|...+.+++|+||+ +++++.... ..|.+||
T Consensus 207 ~~~~~~~yp~~g~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 207 PRTINIPYPKAGAKNPVVRIFIIDTT-YPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp CEEEEEECCBTTSCCCEEEEEEEESS-CHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEE
T ss_pred ccceeecCCCCCCCCCeeEEEEEECC-CCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEc
Confidence 78889988 44432000111 01134677889999999998 877774432 2488899
Q ss_pred ----CCCccccccccccccccccccCCccccccccccee-----eeEeccCCCEEEE--ee-c--CeEEEEEccCCCcce
Q 015290 297 ----MRQSALCDHSARILRDAAESHGSKSFFTEIIASIS-----DIKFANDGQHLLS--RD-Y--MNLKLWDIRMDSTPV 362 (409)
Q Consensus 297 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~s~~g~~l~s--g~-~--~~v~iwd~~~~~~~~ 362 (409)
..+++. ..++.. ...+|...+. .+.|+|||+.|+. .. + ..|.+||+.. ++ .
T Consensus 285 ~~~~~~~g~~----~~~~~~---------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~-~~-~ 349 (719)
T 1z68_A 285 FREDWQTWDC----PKTQEH---------IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV-EN-A 349 (719)
T ss_dssp ECSSSSSEEC----CGGGEE---------EEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS-TT-C
T ss_pred ccCCCCCCce----EEEEec---------ccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC-Cc-e
Confidence 766653 122210 0011234455 7899999996654 32 2 4677888763 33 4
Q ss_pred EEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 363 ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
..+..+...+ ..+.++ +++.|+..+.+
T Consensus 350 ~~lt~~~~~v---------------~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 350 IQITSGKWEA---------------INIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp EECSCSSSCE---------------EEEEEE-CSSEEEEEESC
T ss_pred EecccCceEE---------------EEEEEE-eCCEEEEEEec
Confidence 4444333222 355666 77766655543
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=4.3e-16 Score=139.13 Aligned_cols=258 Identities=7% Similarity=-0.032 Sum_probs=157.0
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEecc-CCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETV-GGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
..+..++|+|||++|++++.+ .|.+|++. +++.. .+.....+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~-------------------------~~~~~~~~----------- 82 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIV-------------------------HEASHPIG----------- 82 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEE-------------------------EEEEEECC-----------
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEE-------------------------EeeEeecC-----------
Confidence 467889999999999999887 99999987 55420 01111111
Q ss_pred eccceEEEEEEecCCCCE--EEEEe-------------CCCeEEEEEcC-CceeeeeeccCCCcccccccccccccCcee
Q 015290 112 IEEKINRVRWCAAPNGSM--FILST-------------NDKTIKLWKVR-DQKVKKIKEMDHFPFVSSENTLLAEKNFMN 175 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~--l~s~~-------------~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (409)
+.+..++| +|+|++ ++++. .++++.+|++. .++......... .........
T Consensus 83 --g~~~~~~~--spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~---------~~~~~~~~~ 149 (365)
T 1jof_A 83 --GHPRANDA--DTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE---------YQENTGIHG 149 (365)
T ss_dssp --SSGGGGCT--TSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE---------CCTTCCEEE
T ss_pred --CCCccEEE--CCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE---------eCCCCcceE
Confidence 12345778 799984 44543 68999999997 354432211000 001123344
Q ss_pred ccCCCCCceeecccccccceeEEEecC-Ccccceeeeeec-cccccceeEEEeCCCCCeEEEe--cCCeEEEEEccC-CC
Q 015290 176 EHNPPSFAHGYHLEWTENMATKIANVG-NSVHARCQKVYP-HAHDFNINSISNNSDCETFVSA--DDLRINLWNLEI-SD 250 (409)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~-~~ 250 (409)
..+++++.+++.... .++.|++|+++ +... ..+..+. ..+...+..++|+|+|++++++ .++.|.+|++.. .+
T Consensus 150 ~~~spdG~~l~~~~~-~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 227 (365)
T 1jof_A 150 MVFDPTETYLYSADL-TANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH 227 (365)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EEECCCCCEEEEEcC-CCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCC
Confidence 455666666654432 24689999997 3221 1122220 1235668999999999998876 578999998762 23
Q ss_pred cee---eeeecCCCcCcCccC------ceEEEE-EeCCCCCEEEEEeCC-C-----eEEEEeCC-Ccccccccccccccc
Q 015290 251 QCF---NIVDMKPSNMDDLTE------VITSAE-FHPIYCNLLAYSSSR-G-----FVRLVDMR-QSALCDHSARILRDA 313 (409)
Q Consensus 251 ~~~---~~~~~~~~~~~~~~~------~v~~~~-~~p~~~~~l~s~s~d-g-----~i~iwd~~-~~~~~~~~~~~~~~~ 313 (409)
... ..+..-+..+.+|.. .+..++ |+|+| ++|++++.+ + .|.+|++. ++++.. .......
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~-~~~~~~~- 304 (365)
T 1jof_A 228 MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRANKFELQGYIAGFKLRDCGSIEK-QLFLSPT- 304 (365)
T ss_dssp CEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEESSTTSCCEEEEEEECTTSCEEE-EEEEEEC-
T ss_pred cEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CEEEEECCCCCCCCCCeEEEEEECCCCCEEE-eeeeeec-
Confidence 321 122111111223333 588999 99999 877766543 2 89999986 443210 0001111
Q ss_pred ccccCCcccccccccceeeeEecc---CCCEEEEee-c-CeEEEEEccC
Q 015290 314 AESHGSKSFFTEIIASISDIKFAN---DGQHLLSRD-Y-MNLKLWDIRM 357 (409)
Q Consensus 314 ~~~~~~~~~~~~~~~~i~~~~~s~---~g~~l~sg~-~-~~v~iwd~~~ 357 (409)
+......++|+| ||++|++++ + +.|++|++..
T Consensus 305 ------------~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 305 ------------PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp ------------SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred ------------CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 123467789999 899999885 4 8999999974
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=3.8e-16 Score=138.39 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=60.9
Q ss_pred CceEEEEEeC-CCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 268 EVITSAEFHP-IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 268 ~~v~~~~~~p-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
..+.+++|+| ++ ++++++ ++.|.+||+.+++.. ..+.. ...+.+++|+|+|++|++++
T Consensus 255 ~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~~----~~~~~--------------~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 255 ELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKLI----KAANL--------------DHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp SCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTEEE----EEEEC--------------SSCCCEEEECSSSSCEEEES
T ss_pred CcceeeEecCCCC-CEEEEE--cCeEEEEECccCeEE----EEEcC--------------CCCccceEECCCCCEEEEec
Confidence 3567888999 98 888877 889999999887541 22222 23467899999999888775
Q ss_pred c-CeEEEEEccCCCcceEEEecc
Q 015290 347 Y-MNLKLWDIRMDSTPVATFKIH 368 (409)
Q Consensus 347 ~-~~v~iwd~~~~~~~~~~~~~~ 368 (409)
. +.|++||+.+ ++.+..++..
T Consensus 314 ~~~~v~v~d~~~-~~~~~~~~~~ 335 (349)
T 1jmx_B 314 TFNDLAVFNPDT-LEKVKNIKLP 335 (349)
T ss_dssp BSSEEEEEETTT-TEEEEEEECS
T ss_pred CCCeEEEEeccc-cceeeeeecC
Confidence 4 9999999986 7778777655
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=2.3e-15 Score=132.29 Aligned_cols=252 Identities=10% Similarity=0.075 Sum_probs=163.7
Q ss_pred CCcEEEEEECCCCCEEEEEecC------------------------CeEEEEeccCCcCCCCccchhhhhhhcccccccC
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRG------------------------GRVILFETVGGKNTPNQHISRSELEKQMDFTSTS 87 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~d------------------------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (409)
-+.+.+|+++|+|+++++...+ +.|.+||..+++.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--------------------- 81 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI--------------------- 81 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE---------------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE---------------------
Confidence 3579999999999999888777 3678888766552
Q ss_pred CCceeeeeeec-CCCccccccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCce-eeeeeccCCCccccccc
Q 015290 88 HPEYRYKTEFQ-SHEPEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK-VKKIKEMDHFPFVSSEN 165 (409)
Q Consensus 88 ~~~~~~~~~~~-~h~~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~ 165 (409)
+..+. ++- ..+..|++ +++|+++++...++.|++|+..... ...........
T Consensus 82 ------~~~~~~~~~------------~~p~gia~--d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~------ 135 (329)
T 3fvz_A 82 ------LQSSGKNLF------------YLPHGLSI--DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQP------ 135 (329)
T ss_dssp ------EEEECTTTC------------SSEEEEEE--CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBC------
T ss_pred ------EeccCCCcc------------CCceEEEE--CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCC------
Confidence 22222 222 47889999 7899988888889999999986542 11111000000
Q ss_pred ccccccCceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCC-CCCeEEEe--cCCeEE
Q 015290 166 TLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA--DDLRIN 242 (409)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~--~d~~i~ 242 (409)
+ .-.++...+..++++| ++..+++. .++.|+
T Consensus 136 -----------------------------------------g-----~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 136 -----------------------------------------G-----SDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp -----------------------------------------C-----CSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred -----------------------------------------C-----CCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 0 0023344678999999 78777776 489999
Q ss_pred EEEccCCCceeeeeecCCCc---CcCccCceEEEEEeCC-CCCEEEEEeCCCeEEEEeCCCccccccccccccccccccC
Q 015290 243 LWNLEISDQCFNIVDMKPSN---MDDLTEVITSAEFHPI-YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHG 318 (409)
Q Consensus 243 lwd~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~p~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 318 (409)
+|+.. +..+..+...... ..++-.....++++|+ + .++++...++.|++||..+++. +..+..
T Consensus 170 ~~~~~--g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g-~l~v~d~~~~~I~~~~~~~G~~----~~~~~~------ 236 (329)
T 3fvz_A 170 QFSPS--GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD-QLCVADRENGRIQCFKTDTKEF----VREIKH------ 236 (329)
T ss_dssp EECTT--SCEEEEECEECCSSSCCTTEESCEEEEEEETTTT-EEEEEETTTTEEEEEETTTCCE----EEEECC------
T ss_pred EEcCC--CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC-EEEEEECCCCEEEEEECCCCcE----EEEEec------
Confidence 99954 5555543211000 0123345899999998 6 8888888899999999986653 222222
Q ss_pred CcccccccccceeeeEeccCCCEEEE-------eec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeE
Q 015290 319 SKSFFTEIIASISDIKFANDGQHLLS-------RDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFEC 390 (409)
Q Consensus 319 ~~~~~~~~~~~i~~~~~s~~g~~l~s-------g~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 390 (409)
..+...+..++|+| +..+++ ... ..|++||+.+ ++.+..+...... ...+..+
T Consensus 237 -----~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~------------~~~p~~i 297 (329)
T 3fvz_A 237 -----ASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKH------------FDMPHDI 297 (329)
T ss_dssp -----TTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSSC------------CSSEEEE
T ss_pred -----cccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCCc------------cCCeeEE
Confidence 11234677888998 433332 222 5899999986 7888777421111 0112689
Q ss_pred EEcCCCCeEEEcccCCCC
Q 015290 391 SVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 391 ~~spdg~~l~s~s~dg~i 408 (409)
+++|||.++++...++.|
T Consensus 298 a~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 298 VASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp EECTTSEEEEEESSSCCE
T ss_pred EECCCCCEEEEECCCCEE
Confidence 999999888888777765
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=3e-15 Score=129.60 Aligned_cols=231 Identities=8% Similarity=-0.003 Sum_probs=161.0
Q ss_pred CCCcEEEEEECCCCC-EEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 31 DVDIVSAIEFDKTGD-YLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 31 h~~~v~~v~~~~~~~-~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
+.....+++|+|+|+ +++++..++.|..|+..++ . ..+..+.
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~----------------------------~~~~~~~-------- 68 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L----------------------------SPEMHPS-------- 68 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E----------------------------EEEESSC--------
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e----------------------------EEEECCC--------
Confidence 456778999999998 7788888999999998765 2 2334444
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
..+.++++ +++|+++++...++.|.+||..+++.......
T Consensus 69 ----~~~~~l~~--~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~---------------------------------- 108 (296)
T 3e5z_A 69 ----HHQNGHCL--NKQGHLIACSHGLRRLERQREPGGEWESIADS---------------------------------- 108 (296)
T ss_dssp ----SSEEEEEE--CTTCCEEEEETTTTEEEEECSTTCCEEEEECE----------------------------------
T ss_pred ----CCcceeeE--CCCCcEEEEecCCCeEEEEcCCCCcEEEEeec----------------------------------
Confidence 67899999 78998877777778999999977765433110
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEE----e-c-------------CCeEEEEEccCCCc
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS----A-D-------------DLRINLWNLEISDQ 251 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~----~-~-------------d~~i~lwd~~~~~~ 251 (409)
........+..++++|+|+++++ | . .+.|..++.. +.
T Consensus 109 -----------------------~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~ 163 (296)
T 3e5z_A 109 -----------------------FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GT 163 (296)
T ss_dssp -----------------------ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SC
T ss_pred -----------------------cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CC
Confidence 00111234567899999998887 3 1 2344444433 33
Q ss_pred eeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCC-Cccc-cccccccccccccccCCcccccccccc
Q 015290 252 CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMR-QSAL-CDHSARILRDAAESHGSKSFFTEIIAS 329 (409)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (409)
. .. +..+......++|+|++ +.+++.+.++.|.+||+. .++. .. ...+.. +...
T Consensus 164 ~-~~-------~~~~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~~g~~~~~--~~~~~~-------------~~~~ 219 (296)
T 3e5z_A 164 L-SA-------PIRDRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLNARGETEYQ--GVHFTV-------------EPGK 219 (296)
T ss_dssp E-EE-------EECCCSSEEEEEECTTS-CEEEEETTTTEEEEEEECSSSCEEEE--EEEECC-------------SSSC
T ss_pred E-EE-------eecCCCCCccEEECCCC-CEEEEeCCCCeEEEEEECCCCcCcCC--CeEeeC-------------CCCC
Confidence 2 22 23344567899999999 877777888999999987 3332 00 111211 1245
Q ss_pred eeeeEeccCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEE-cCCCCeEEEcccCC
Q 015290 330 ISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSV-SGDGLHFATGSYRR 406 (409)
Q Consensus 330 i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-spdg~~l~s~s~dg 406 (409)
+..++++++|+++++. ++.|.+||.. ++.+..+..+.. + .+++| +|+++.|++++.++
T Consensus 220 p~~i~~d~~G~l~v~~-~~~v~~~~~~--g~~~~~~~~~~~-~---------------~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 220 TDGLRVDAGGLIWASA-GDGVHVLTPD--GDELGRVLTPQT-T---------------SNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp CCSEEEBTTSCEEEEE-TTEEEEECTT--SCEEEEEECSSC-C---------------CEEEEESTTSCEEEEEETTE
T ss_pred CCeEEECCCCCEEEEc-CCeEEEECCC--CCEEEEEECCCC-c---------------eeEEEECCCCCEEEEEcCCe
Confidence 6789999999977776 7899999985 778888876665 3 58999 68999888887765
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=1.6e-15 Score=146.53 Aligned_cols=250 Identities=10% Similarity=0.051 Sum_probs=155.1
Q ss_pred cCCCcEEEEEECCCCCEEEEE--ecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 30 QDVDIVSAIEFDKTGDYLAVG--DRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 30 ~h~~~v~~v~~~~~~~~la~~--~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
.|...|..++|++++-++++. +.++...||....+.. ...+..|.
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~---------------------------~~~l~~~~------ 67 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA---------------------------EESALPAP------ 67 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC---------------------------EEESSCTT------
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC---------------------------cceeCCCC------
Confidence 378899999999887777777 5688999999643321 23344444
Q ss_pred ccceeccceE---------EEEEEecCCCCE-EEEEeC-CCeEEEEEcC--C-ceeeeeeccCCCcccccccccccccCc
Q 015290 108 KSLEIEEKIN---------RVRWCAAPNGSM-FILSTN-DKTIKLWKVR--D-QKVKKIKEMDHFPFVSSENTLLAEKNF 173 (409)
Q Consensus 108 ~~~~~~~~v~---------~l~~~~s~~~~~-l~s~~~-d~~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (409)
..+. ...|..||||+. |+.++. +..|.++++. + +....+....
T Consensus 68 ------~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~----------------- 124 (662)
T 3azo_A 68 ------WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVS----------------- 124 (662)
T ss_dssp ------CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCC-----------------
T ss_pred ------ccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCc-----------------
Confidence 2333 455632489998 776654 4556666654 2 3322211000
Q ss_pred eeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC----------CeEE
Q 015290 174 MNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD----------LRIN 242 (409)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d----------~~i~ 242 (409)
...|...+..++|+|||+.|+++ .+ ..|+
T Consensus 125 ----------------------------------------~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 125 ----------------------------------------AVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp ----------------------------------------CSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred ----------------------------------------cCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 01155677899999999999987 65 5899
Q ss_pred EEEccCC-----CceeeeeecCCCcCc-CccCceEEEEEeCCCCCEEEEEeCC--------CeEEEEeCC-Ccccccccc
Q 015290 243 LWNLEIS-----DQCFNIVDMKPSNMD-DLTEVITSAEFHPIYCNLLAYSSSR--------GFVRLVDMR-QSALCDHSA 307 (409)
Q Consensus 243 lwd~~~~-----~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~s~s~d--------g~i~iwd~~-~~~~~~~~~ 307 (409)
+||+... +.. .. +. .+...+..++|+||| ++|+.++.+ ..|.+||+. ++... . .
T Consensus 165 ~~~~~~~~~~~~~~~-~~-------l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~-~-~ 233 (662)
T 3azo_A 165 AVPLDGSAAADRSAV-RE-------LSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDGRFA-D-T 233 (662)
T ss_dssp EEETTSTTTTCGGGS-EE-------SSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTSCEE-E-E
T ss_pred EEECCCCccccCCce-eE-------EEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCCccc-c-c
Confidence 9999821 333 22 33 455678889999999 988877754 379999998 45110 0 1
Q ss_pred ccccccccccCCcccccccccceeeeEeccCCCEEEEeec-C--eEEEEEccCCCcceEEEecccCcccccccccCCCCc
Q 015290 308 RILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M--NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSI 384 (409)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (409)
..+. .+|...+..++|+|||+++++++. + .|.+||+.. ++.......+.... .....
T Consensus 234 ~~l~------------~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~-------~p~w~ 293 (662)
T 3azo_A 234 RTLL------------GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFA-------GPLWT 293 (662)
T ss_dssp EEEE------------EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSS-------CCCCS
T ss_pred EEeC------------CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC-Cceeeccccccccc-------Ccccc
Confidence 1111 112457889999999997777654 6 677777653 44333222222110 00111
Q ss_pred cceeeEEEcCCCCeEEEcccCCC
Q 015290 385 FDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 385 ~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
.++..++|+|+++++++++. +.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~-~~ 315 (662)
T 3azo_A 294 PGMRWFAPLANGLIAVVHGK-GA 315 (662)
T ss_dssp TTCCSEEECTTSCEEEEEBS-SS
T ss_pred ccCceEeEeCCCEEEEEEEc-Cc
Confidence 12357999999999998876 54
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=2.7e-15 Score=146.52 Aligned_cols=74 Identities=9% Similarity=0.140 Sum_probs=59.4
Q ss_pred EEEEECCCCCEEEEEecC---------CeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 36 SAIEFDKTGDYLAVGDRG---------GRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 36 ~~v~~~~~~~~la~~~~d---------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
..++|||||++||.++.+ +.+.+||+.+++. ..+..|.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~----------------------------~~l~~~~----- 111 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL----------------------------ITEERIP----- 111 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE----------------------------CCSSCCC-----
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE----------------------------EEcccCC-----
Confidence 458999999999999876 5667999998763 2355565
Q ss_pred cccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeee
Q 015290 107 LKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKI 152 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 152 (409)
+.+...+| ||||+.|+.+. |+.|++|++.+++...+
T Consensus 112 -------~~~~~~~~--SPdG~~la~~~-~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 112 -------NNTQWVTW--SPVGHKLAYVW-NNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp -------TTEEEEEE--CSSTTCEEEEE-TTEEEEESSTTSCCEEC
T ss_pred -------CcceeeEE--CCCCCEEEEEE-CCeEEEEECCCCceEEE
Confidence 68999999 89999999885 68999999988765543
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=5.2e-14 Score=123.93 Aligned_cols=244 Identities=11% Similarity=0.100 Sum_probs=155.3
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
+...+.+++|+|+|++++++..++.|.+||..+++. ......+.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~---------------------------~~~~~~~~--------- 86 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI---------------------------KRPFVSHK--------- 86 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE---------------------------EEEEECSS---------
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE---------------------------EEEeeCCC---------
Confidence 455678999999999888888899999999887652 11122333
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCC----CeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTND----KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
..+.+++| +++|+++++...+ +.|.+||..++........
T Consensus 87 ---~~~~~i~~--~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~------------------------------- 130 (333)
T 2dg1_A 87 ---ANPAAIKI--HKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED------------------------------- 130 (333)
T ss_dssp ---SSEEEEEE--CTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS-------------------------------
T ss_pred ---CCcceEEE--CCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc-------------------------------
Confidence 67999999 7899877777666 6899999877654322110
Q ss_pred cccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-c------CCeEEEEEccCCCceeeeeecC
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D------DLRINLWNLEISDQCFNIVDMK 259 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~------d~~i~lwd~~~~~~~~~~~~~~ 259 (409)
..+...+..++++|+++.+++. . .+.|..+|.. .+.....
T Consensus 131 ----------------------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~-~~~~~~~---- 177 (333)
T 2dg1_A 131 ----------------------------LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD-FRTVTPI---- 177 (333)
T ss_dssp ----------------------------SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT-SCCEEEE----
T ss_pred ----------------------------CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC-CCEEEEe----
Confidence 1123467889999999877776 3 2455555544 2232221
Q ss_pred CCcCcCccCceEEEEEeCCCCCEE-EEEeCCCeEEEEeCCC-ccccccccccccccccccCCcccccccccceeeeEecc
Q 015290 260 PSNMDDLTEVITSAEFHPIYCNLL-AYSSSRGFVRLVDMRQ-SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN 337 (409)
Q Consensus 260 ~~~~~~~~~~v~~~~~~p~~~~~l-~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 337 (409)
......+..++|+|++ +.| ++.+.++.|.+||+.. +... ..+.... ...+.++ ..+..+++++
T Consensus 178 ----~~~~~~~~~i~~~~dg-~~l~v~~~~~~~i~~~d~~~~g~~~----~~~~~~~-----~~~~~~~-~~~~~i~~d~ 242 (333)
T 2dg1_A 178 ----IQNISVANGIALSTDE-KVLWVTETTANRLHRIALEDDGVTI----QPFGATI-----PYYFTGH-EGPDSCCIDS 242 (333)
T ss_dssp ----EEEESSEEEEEECTTS-SEEEEEEGGGTEEEEEEECTTSSSE----EEEEEEE-----EEECCSS-SEEEEEEEBT
T ss_pred ----ecCCCcccceEECCCC-CEEEEEeCCCCeEEEEEecCCCcCc----ccccceE-----EEecCCC-CCCCceEECC
Confidence 1223457899999998 744 5556688999999864 2211 1110000 0000111 3567899999
Q ss_pred CCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 338 DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 338 ~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
+|+++++... +.|.+||.. ++.+..+..+..... ....+.+++|+||++.|+.++.+
T Consensus 243 ~G~l~v~~~~~~~v~~~d~~--g~~~~~~~~~~~~~g---------~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 243 DDNLYVAMYGQGRVLVFNKR--GYPIGQILIPGRDEG---------HMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TCCEEEEEETTTEEEEECTT--SCEEEEEECTTGGGT---------CSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEEcCCCEEEEECCC--CCEEEEEEcCCCccc---------cccCcceEEECCCCCEEEEEeCc
Confidence 9997777654 899999984 666777654432000 00001589999998777665554
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=1.3e-13 Score=122.61 Aligned_cols=263 Identities=11% Similarity=0.054 Sum_probs=152.6
Q ss_pred CCCEEEEEe------cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccce
Q 015290 43 TGDYLAVGD------RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKI 116 (409)
Q Consensus 43 ~~~~la~~~------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v 116 (409)
+++++++.. .|+.|.+||..+++. +..+..+. .+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~---------------------------~~~i~~g~------------~p- 53 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKF---------------------------LGMVPTAF------------NG- 53 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCE---------------------------EEEEECCE------------EE-
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeE---------------------------EEEecCCC------------CC-
Confidence 566665543 478999999887663 33444443 34
Q ss_pred EEEEEEecCCCCEEEEEe----------CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceee
Q 015290 117 NRVRWCAAPNGSMFILST----------NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 186 (409)
Q Consensus 117 ~~l~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
.++| +||+++++++. .+++|.+||..+.+........... ............++++.+++
T Consensus 54 -~i~~--spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~-------~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 54 -HVQV--SNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR-------VQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp -EEEE--CTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB-------CCBCCCGGGEEECTTSSEEE
T ss_pred -ceEE--CCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc-------cccCCCcceEEECCCCCEEE
Confidence 8899 89999999886 3678999999887765544321100 00011233344566777777
Q ss_pred cccccccceeEEEecCCcccceeeee-eccccccceeEEEeCCCC-CeEEEe-cCCeEEEEEccCCCcee----------
Q 015290 187 HLEWTENMATKIANVGNSVHARCQKV-YPHAHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQCF---------- 253 (409)
Q Consensus 187 ~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~-~~l~~~-~d~~i~lwd~~~~~~~~---------- 253 (409)
.+....++.|.+||+.+. +.+.. + .. .. ...+.+.|++ ..+++. .||.+.+|++...+...
T Consensus 124 v~n~~~~~~v~v~d~~~~---~~~~~~i-~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 124 LQNASPATSIGIVDVAKG---DYVEDVT-AA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp EEEESSSEEEEEEETTTT---EEEEEEG-GG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred EECCCCCCeEEEEECCCC---cEEEEEe-cC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 776544678999999864 33332 1 11 01 1112333433 222333 44444444443112111
Q ss_pred --------------------------eeeecCCCc--------CcC----c----cCceEEEEEeCCCCCEEEEEeC---
Q 015290 254 --------------------------NIVDMKPSN--------MDD----L----TEVITSAEFHPIYCNLLAYSSS--- 288 (409)
Q Consensus 254 --------------------------~~~~~~~~~--------~~~----~----~~~v~~~~~~p~~~~~l~s~s~--- 288 (409)
..++..... +.. + ......++|+|++ ..++.+..
T Consensus 198 ~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg-~~lyv~~~~~~ 276 (361)
T 2oiz_A 198 VKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS-GRMYVFMHPDG 276 (361)
T ss_dssp TTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT-TEEEEEEESSC
T ss_pred CCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC-CeEEEEEccCC
Confidence 000000000 000 0 0111126889998 55554432
Q ss_pred --------CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEEEEccCCC-
Q 015290 289 --------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDS- 359 (409)
Q Consensus 289 --------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~- 359 (409)
.+.|.+||+.+++. +..+.. .. ...++|+|||++|++++.+.|.+||..+ +
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~----v~~i~~--------------~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t-~~ 336 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQR----VARIPG--------------RD-ALSMTIDQQRNLMLTLDGGNVNVYDISQ-PE 336 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEE----EEEEEC--------------TT-CCEEEEETTTTEEEEECSSCEEEEECSS-SS
T ss_pred CcccccCCCceEEEEECCCCcE----EEEEec--------------CC-eeEEEECCCCCEEEEeCCCeEEEEECCC-Cc
Confidence 34899999988764 233443 13 8899999999999987669999999986 7
Q ss_pred -cceEEEecccCcccccccccCCCCccceeeEEEcCCCC
Q 015290 360 -TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 397 (409)
Q Consensus 360 -~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 397 (409)
+.+..+....... ..++++|||+
T Consensus 337 l~~~~~i~~~G~~P---------------~~~~~~p~G~ 360 (361)
T 2oiz_A 337 PKLLRTIEGAAEAS---------------LQVQFHPVGG 360 (361)
T ss_dssp CEEEEEETTSCSSE---------------EEEEECCCSC
T ss_pred ceeeEEeccCCCCc---------------EEEEecCCCC
Confidence 7887874433321 5899999986
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=8.6e-15 Score=141.40 Aligned_cols=138 Identities=12% Similarity=0.007 Sum_probs=86.4
Q ss_pred cccceeEEEeCCCCCeEEEe-cC--------CeEEEEEccCCC---ceeeeeecCCCcCcCccCceEEEEEeCCCCCEEE
Q 015290 217 HDFNINSISNNSDCETFVSA-DD--------LRINLWNLEISD---QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA 284 (409)
Q Consensus 217 ~~~~v~~l~~~~~~~~l~~~-~d--------~~i~lwd~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 284 (409)
+...+..++|+|||++|+.+ .+ ..|++||+...+ ..... ..++...+..+.|+|+| ++++
T Consensus 186 ~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l-------~~~~~~~~~~~~~spdg-~l~~ 257 (662)
T 3azo_A 186 AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL-------LGGPEEAIAQAEWAPDG-SLIV 257 (662)
T ss_dssp CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE-------EEETTBCEEEEEECTTS-CEEE
T ss_pred CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe-------CCCCCceEcceEECCCC-eEEE
Confidence 34566778999999999876 44 379999998323 33332 23456788999999999 7888
Q ss_pred EEeCCC--eEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEEEEccCCCcce
Q 015290 285 YSSSRG--FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPV 362 (409)
Q Consensus 285 s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~ 362 (409)
+++.++ .|.+||+.+++.. .+...+. ... . ..-...+..++|+|+++++++++.+.++||.+...+..+
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~~----~l~~~~~-~~~-~---p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 258 ATDRTGWWNLHRVDPATGAAT----QLCRREE-EFA-G---PLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGEL 328 (662)
T ss_dssp EECTTSSCEEEEECTTTCCEE----ESSCCSS-BSS-C---CCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEE
T ss_pred EECCCCCeEEEEEECCCCcee----ecccccc-ccc-C---ccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcE
Confidence 888888 5666676555421 1111110 000 0 000012567899999999888755778888443323446
Q ss_pred EEEecccCc
Q 015290 363 ATFKIHEHL 371 (409)
Q Consensus 363 ~~~~~~~~~ 371 (409)
..+..+...
T Consensus 329 ~~l~~~~~~ 337 (662)
T 3azo_A 329 VDAAGPWTE 337 (662)
T ss_dssp EECCSSCCE
T ss_pred EEecCCCCe
Confidence 666665443
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=6.6e-14 Score=136.12 Aligned_cols=249 Identities=11% Similarity=0.081 Sum_probs=146.5
Q ss_pred CCCcEEEEEECCCCCEEEEEecCC-----eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGG-----RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFD 105 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 105 (409)
|...+..++|||||++||.++.++ .|++||+.+++. ......+
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~---------------------------~~~~~~~----- 170 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE---------------------------LPDVLER----- 170 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE---------------------------EEEEEEE-----
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC---------------------------CcccccC-----
Confidence 344688999999999999876543 899999998763 1111111
Q ss_pred ccccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 106 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..+..++| +|||+.|+.++.++. .........
T Consensus 171 --------~~~~~~~w--spDg~~l~~~~~~~~-------~~~~~~~~~------------------------------- 202 (710)
T 2xdw_A 171 --------VKFSCMAW--THDGKGMFYNAYPQQ-------DGKSDGTET------------------------------- 202 (710)
T ss_dssp --------ECSCCEEE--CTTSSEEEEEECCCC-------SSCCSSSCC-------------------------------
T ss_pred --------cccceEEE--EeCCCEEEEEEECCc-------ccccccccc-------------------------------
Confidence 23567999 899999999887764 000000000
Q ss_pred ecccccccceeEEEecCCcccc-eeeeeeccccccceeEEEeCCCCCeEEEe-c-----CCeEEEEEccCC-----Cc-e
Q 015290 186 YHLEWTENMATKIANVGNSVHA-RCQKVYPHAHDFNINSISNNSDCETFVSA-D-----DLRINLWNLEIS-----DQ-C 252 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~-----d~~i~lwd~~~~-----~~-~ 252 (409)
.......|++|++.+.... ..+... ..+...+..+.|+|||++|+.+ . +..|++||+... +. .
T Consensus 203 ---~~~~~~~v~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 203 ---STNLHQKLYYHVLGTDQSEDILCAEF-PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp ---CCCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ---ccCCCCEEEEEECCCCcccceEEecc-CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 0000113444444332111 111110 2245557789999999999875 4 568999999730 21 2
Q ss_pred eeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC----CeEEEEeCCCccccccccccccccccccCCccccccccc
Q 015290 253 FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR----GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
... +..+...+.. .|+|+| ..|+..+.. +.|.+||+.++... ..+.+..|. ...
T Consensus 279 ~~~-------l~~~~~~~~~-~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~--~~~~l~~~~-----------~~~ 336 (710)
T 2xdw_A 279 WVK-------LIDNFEGEYD-YVTNEG-TVFTFKTNRHSPNYRLINIDFTDPEES--KWKVLVPEH-----------EKD 336 (710)
T ss_dssp CEE-------EECSSSSCEE-EEEEET-TEEEEEECTTCTTCEEEEEETTSCCGG--GCEEEECCC-----------SSC
T ss_pred eEE-------eeCCCCcEEE-EEeccC-CEEEEEECCCCCCCEEEEEeCCCCCcc--cceeccCCC-----------CCC
Confidence 333 2334444444 488888 666555432 36999998775310 001111100 012
Q ss_pred ceeeeEeccCCCEEEEee-cC--eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEE
Q 015290 329 SISDIKFANDGQHLLSRD-YM--NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT 401 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~sg~-~~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 401 (409)
.+..++|++++.++++.. ++ .|++||+.. ++.+..+..+...+ ..++++|++..|+.
T Consensus 337 ~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v---------------~~~~~s~d~~~l~~ 396 (710)
T 2xdw_A 337 VLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSV---------------VGYSGQKKDTEIFY 396 (710)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEE---------------EEEECCTTCSEEEE
T ss_pred eEEEEEEEcCCEEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceE---------------EEEecCCCCCEEEE
Confidence 577889997777777775 34 577778754 66667776664432 47889999876653
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.62 E-value=3.6e-13 Score=114.74 Aligned_cols=229 Identities=8% Similarity=0.006 Sum_probs=149.3
Q ss_pred cEEEEEECCCCCEEE-EEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 34 IVSAIEFDKTGDYLA-VGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 34 ~v~~v~~~~~~~~la-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
...+++++++|++++ +...++.|.+|+..+... ......+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~----------- 66 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT---------------------------TVLPFNGL----------- 66 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC--------------------------------EECCCCSC-----------
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc---------------------------ceEeeCCc-----------
Confidence 788999999999777 546788999998765432 00011121
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
..+.++++ ++++.++++.. ++.|.+||..+.......
T Consensus 67 -~~p~~i~~--~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~--------------------------------------- 103 (270)
T 1rwi_B 67 -YQPQGLAV--DGAGTVYVTDF-NNRVVTLAAGSNNQTVLP--------------------------------------- 103 (270)
T ss_dssp -CSCCCEEE--CTTCCEEEEET-TTEEEEECTTCSCCEECC---------------------------------------
T ss_pred -CCcceeEE--CCCCCEEEEcC-CCEEEEEeCCCceEeeee---------------------------------------
Confidence 36778999 78888665555 889999997655332110
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceE
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 271 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 271 (409)
......+..++++++++.+++. .++.|.+|+.. ....... .......+.
T Consensus 104 ----------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-~~~~~~~-------~~~~~~~p~ 153 (270)
T 1rwi_B 104 ----------------------FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAG-SKTQTVL-------PFTGLNDPD 153 (270)
T ss_dssp ----------------------CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTT-CCSCEEC-------CCCSCCSCC
T ss_pred ----------------------cCCcCCCcceEECCCCCEEEEECCCCEEEEEECC-CceeEee-------ccccCCCce
Confidence 1122456889999999877777 78899999765 2222111 112224568
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeE
Q 015290 272 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNL 350 (409)
Q Consensus 272 ~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v 350 (409)
.++++|+| +++++...++.|.+||....... ..... +...+..++++++|.++++.. ++.|
T Consensus 154 ~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~----~~~~~-------------~~~~p~~i~~d~~g~l~v~~~~~~~v 215 (270)
T 1rwi_B 154 GVAVDNSG-NVYVTDTDNNRVVKLEAESNNQV----VLPFT-------------DITAPWGIAVDEAGTVYVTEHNTNQV 215 (270)
T ss_dssp CEEECTTC-CEEEEEGGGTEEEEECTTTCCEE----ECCCS-------------SCCSEEEEEECTTCCEEEEETTTSCE
T ss_pred eEEEeCCC-CEEEEECCCCEEEEEecCCCceE----eeccc-------------CCCCceEEEECCCCCEEEEECCCCcE
Confidence 89999999 88887777889999998765421 11001 013578899999997666665 4899
Q ss_pred EEEEccCCCcceEEEec-ccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 351 KLWDIRMDSTPVATFKI-HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 351 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
.+||... ........ +... +.+++++|+|+++++...++.|
T Consensus 216 ~~~~~~~--~~~~~~~~~~~~~---------------p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 216 VKLLAGS--TTSTVLPFTGLNT---------------PLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp EEECTTC--SCCEECCCCSCSC---------------EEEEEECTTCCEEEEEGGGTEE
T ss_pred EEEcCCC--CcceeeccCCCCC---------------ceeEEECCCCCEEEEECCCCEE
Confidence 9999863 33322211 1111 2589999999988888877765
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.61 E-value=4.4e-14 Score=127.15 Aligned_cols=253 Identities=10% Similarity=0.002 Sum_probs=146.2
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...+..+.|+|||++|+.++.++.|.+||+.+++. ...+..+.
T Consensus 80 ~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~---------------------------~~~~~~~~---------- 122 (388)
T 3pe7_A 80 GDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEE---------------------------NVVYQVPA---------- 122 (388)
T ss_dssp CBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCE---------------------------EEEEECCT----------
T ss_pred CCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcc---------------------------eeeeechh----------
Confidence 33444678999999999999999999999998763 12233333
Q ss_pred eccceEEEEEEecCCCCEEEEE----------------------eCCCeEEEEEcCCceeeeeeccCCCccccccccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILS----------------------TNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLA 169 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~----------------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (409)
..+....|..++++++++.. ..+..|.+||+.+++...+...
T Consensus 123 --~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-------------- 186 (388)
T 3pe7_A 123 --EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-------------- 186 (388)
T ss_dssp --TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE--------------
T ss_pred --hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC--------------
Confidence 34444555437899888743 2447899999998876554321
Q ss_pred ccCceeccCCC-CCceeecccccc----cceeEEEecCCcccceeeeeeccccc--cceeEEEeCCCCCeEEEe--cCC-
Q 015290 170 EKNFMNEHNPP-SFAHGYHLEWTE----NMATKIANVGNSVHARCQKVYPHAHD--FNINSISNNSDCETFVSA--DDL- 239 (409)
Q Consensus 170 ~~~~~~~~~~~-~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~~~--~d~- 239 (409)
........+++ ++..++...... ...+.+++..... .+.+ ..+. ..+..++|+|+|+.|+.. .++
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (388)
T 3pe7_A 187 NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN----MRKV-KTHAEGESCTHEFWVPDGSALVYVSYLKGS 261 (388)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC----CEES-CCCCTTEEEEEEEECTTSSCEEEEEEETTC
T ss_pred CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc----eEEe-eeCCCCcccccceECCCCCEEEEEecCCCC
Confidence 11223334455 555544433311 2367777765422 2222 2232 357788999999988653 322
Q ss_pred ---eEEEEEccCCCceeeeeecCCCcCcCccCc---eEEEEEeCCCCCEEEEE---------eCCCeEEEEeCCCccccc
Q 015290 240 ---RINLWNLEISDQCFNIVDMKPSNMDDLTEV---ITSAEFHPIYCNLLAYS---------SSRGFVRLVDMRQSALCD 304 (409)
Q Consensus 240 ---~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~p~~~~~l~s~---------s~dg~i~iwd~~~~~~~~ 304 (409)
.|++||+. +++...... +.++... ...+.|+|+| +.|+.. ..+..|.+||+.+++.
T Consensus 262 ~~~~l~~~d~~-~g~~~~l~~-----~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-- 332 (388)
T 3pe7_A 262 PDRFIYSADPE-TLENRQLTS-----MPACSHLMSNYDGSLMVGDG-SDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-- 332 (388)
T ss_dssp CCEEEEEECTT-TCCEEEEEE-----ECCEEEEEECTTSSEEEEEE-CCC------------CCCCEEEEEETTTTEE--
T ss_pred CcceEEEEecC-CCceEEEEc-----CCCceeeeecCCCCeEccCC-CcceeEeeeccccccCCCCEEEEEeccCCce--
Confidence 39999998 554332211 1211000 1123799999 666643 4567899999988753
Q ss_pred cccccccccccccCCcccccccccceeeeEeccCCCEEEEeec--CeEEEEEcc
Q 015290 305 HSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY--MNLKLWDIR 356 (409)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~--~~v~iwd~~ 356 (409)
..+..+.... .....+....+..++|+|||++|+..++ +...||.+.
T Consensus 333 ---~~l~~~~~~~--~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 333 ---HRVARHDTSW--KVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp ---EEEEECCCCC--CCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ---EEeccccCcc--cccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 2222211000 0000011114678899999999887653 655666544
No 177
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.61 E-value=5e-13 Score=113.86 Aligned_cols=224 Identities=11% Similarity=0.056 Sum_probs=154.8
Q ss_pred CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccceEEEEEE
Q 015290 43 TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWC 122 (409)
Q Consensus 43 ~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~ 122 (409)
.+++|++++.++.|.+||.++++. +..+..+.. ..+.++.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~---------------------------~w~~~~~~~-----------~~~~~~~~- 44 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI---------------------------VWEYPLEKG-----------WECNSVAA- 44 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE---------------------------EEEEECCTT-----------CCCCEEEE-
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE---------------------------EEEeCCCcc-----------CCCcCeEE-
Confidence 467899999999999999988773 444444430 25778888
Q ss_pred ecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecC
Q 015290 123 AAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVG 202 (409)
Q Consensus 123 ~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 202 (409)
+|+|++++ +.++.|..||. +++......
T Consensus 45 -~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~------------------------------------------------ 72 (276)
T 3no2_A 45 -TKAGEILF--SYSKGAKMITR-DGRELWNIA------------------------------------------------ 72 (276)
T ss_dssp -CTTSCEEE--ECBSEEEEECT-TSCEEEEEE------------------------------------------------
T ss_pred -CCCCCEEE--eCCCCEEEECC-CCCEEEEEc------------------------------------------------
Confidence 78998888 45788999998 666544322
Q ss_pred CcccceeeeeeccccccceeEEEeCCCCCeEEEe-c-CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCC
Q 015290 203 NSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D-DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYC 280 (409)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 280 (409)
......+.++.+.++|+.+++. . ++.+..+|.. ++.+..+.+... ...+......+++.++|
T Consensus 73 ------------~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~-~~~~~~~~~~v~~~~~G- 136 (276)
T 3no2_A 73 ------------APAGCEMQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEFETG-IERPHAQFRQINKNKKG- 136 (276)
T ss_dssp ------------CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEECCS-CSSGGGSCSCCEECTTS-
T ss_pred ------------CCCCccccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEeccCC-CCcccccccCceECCCC-
Confidence 1122356788899999999987 6 7777777754 666655543321 12222345567789999
Q ss_pred CEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCC
Q 015290 281 NLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDS 359 (409)
Q Consensus 281 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~ 359 (409)
+++++...++.|..||.. ++. +..+.. .....++.+.++|++++++.+ +.|..+|..+ +
T Consensus 137 ~~lv~~~~~~~v~~~d~~-G~~----~w~~~~--------------~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t-G 196 (276)
T 3no2_A 137 NYLVPLFATSEVREIAPN-GQL----LNSVKL--------------SGTPFSSAFLDNGDCLVACGDAHCFVQLNLES-N 196 (276)
T ss_dssp CEEEEETTTTEEEEECTT-SCE----EEEEEC--------------SSCCCEEEECTTSCEEEECBTTSEEEEECTTT-C
T ss_pred CEEEEecCCCEEEEECCC-CCE----EEEEEC--------------CCCccceeEcCCCCEEEEeCCCCeEEEEeCcC-C
Confidence 999999999999999987 654 233333 124556778899999998876 7899999886 8
Q ss_pred cceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 360 TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
+.+-.+........ ....+..++..++|.++++.
T Consensus 197 ~~~w~~~~~~~~~~---------~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 197 RIVRRVNANDIEGV---------QLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CEEEEEEGGGSBSC---------CCSEEEEEEECTTSCEEEEE
T ss_pred cEEEEecCCCCCCc---------cccccccceEcCCCCEEEEe
Confidence 88888875432100 11123577888888877765
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=2.8e-13 Score=119.95 Aligned_cols=241 Identities=8% Similarity=0.023 Sum_probs=136.5
Q ss_pred CcEEEEEECCCCCEEEEEecC---Ce--EEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 33 DIVSAIEFDKTGDYLAVGDRG---GR--VILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~d---g~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..+..++|+|||++||.++.+ +. |.+|++.+++. ..+..+.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~----------------------------~~l~~~~------ 104 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS----------------------------KKILEAK------ 104 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE----------------------------EEEEEES------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce----------------------------EEEEcCC------
Confidence 457889999999999988754 34 66777766542 1222223
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
. +..+.| +|+|+.|+.++.+.. ............ ...++.-..
T Consensus 105 ------~-~~~~~w--spdg~~l~~~~~~~~------~~~~~~~~~~~~---------------------~~~~g~~~~- 147 (347)
T 2gop_A 105 ------N-IRSLEW--NEDSRKLLIVGFKRR------EDEDFIFEDDVP---------------------AWFDDLGFF- 147 (347)
T ss_dssp ------E-EEEEEE--CTTSSEEEEEEECCC------C---------CC---------------------CC--------
T ss_pred ------C-ccceeE--CCCCCEEEEEEccCC------CcCCcEEEcccc---------------------eeecCcccc-
Confidence 4 889999 899999988875420 000000000000 000000000
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC------C-eEEEEEccCCCceeeeeecC
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD------L-RINLWNLEISDQCFNIVDMK 259 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d------~-~i~lwd~~~~~~~~~~~~~~ 259 (409)
......+.+|++.+. +.++.+ .. . .+..++|+|+| .++++ .+ . ...||.+. .+.....
T Consensus 148 --~~~~~~l~~~d~~~~---~~~~~l-~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l---- 213 (347)
T 2gop_A 148 --DGEKTTFWIFDTESE---EVIEEF-EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKM---- 213 (347)
T ss_dssp ----CEEEEEEEETTTT---EEEEEE-EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEE----
T ss_pred --cCccceEEEEECCCC---eEEeee-cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCceEEe----
Confidence 001235777777653 221222 22 3 67889999999 77776 43 2 44566555 4543332
Q ss_pred CCcCcCccCceEEEEEeCCCCCEEEEEeCC--------CeEEEEeCCCccccccccccccccccccCCccccccccccee
Q 015290 260 PSNMDDLTEVITSAEFHPIYCNLLAYSSSR--------GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASIS 331 (409)
Q Consensus 260 ~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 331 (409)
..+ ..+..+ +|+| +.|+.++.+ ..|.+|| +++. ..+... +...+.
T Consensus 214 ----~~~-~~~~~~--spdg-~~l~~~~~~~~~~~~~~~~l~~~d--~~~~----~~l~~~-------------~~~~~~ 266 (347)
T 2gop_A 214 ----FEK-VSFYAV--DSDG-ERILLYGKPEKKYMSEHNKLYIYD--GKEV----MGILDE-------------VDRGVG 266 (347)
T ss_dssp ----EEE-ESEEEE--EECS-SCEEEEECCSSSCCCSSCEEEEEC--SSCE----EESSTT-------------CCSEEE
T ss_pred ----ccC-cceeeE--CCCC-CEEEEEEccccCCccccceEEEEC--CCce----Eecccc-------------CCcccC
Confidence 223 344444 9999 777766643 3688888 4332 111111 234677
Q ss_pred e-eEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 332 D-IKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 332 ~-~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
. +.|+ || +++++++ +.++|| +. .++....+. +...+ .+++|+| .++++++.++.
T Consensus 267 ~~~~~s-dg-~~~~~~~~~~~~l~-~~-~g~~~~~~~-~~~~v---------------~~~~~s~--~~~~~~~~~~~ 322 (347)
T 2gop_A 267 QAKIKD-GK-VYFTLFEEGSVNLY-IW-DGEIKPIAK-GRHWI---------------MGFDVDE--IVVYLKETATR 322 (347)
T ss_dssp EEEEET-TE-EEEEEEETTEEEEE-EE-SSSEEEEEC-SSSEE---------------EEEEESS--SEEEEEECSSS
T ss_pred CccEEc-Cc-EEEEEecCCcEEEE-Ec-CCceEEEec-CCCeE---------------EeeeeeC--cEEEEEcCCCC
Confidence 5 8999 88 7777765 999999 87 465544333 33332 5899999 67777766654
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=9.5e-14 Score=134.64 Aligned_cols=232 Identities=10% Similarity=0.003 Sum_probs=140.2
Q ss_pred CCCcEEEEEECCCCCEEEE-----EecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccc
Q 015290 31 DVDIVSAIEFDKTGDYLAV-----GDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFD 105 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~-----~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 105 (409)
|...+.+++|||||++||. |+.+..|++||+.+++. +. ..+...
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~---------------------------~~--~~~~~~-- 167 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW---------------------------SK--VDVIEG-- 167 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCB---------------------------CS--SCCBSC--
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCC---------------------------cC--CcccCc--
Confidence 4557999999999999994 44457899999998763 00 111100
Q ss_pred ccccceeccceEEEEEEecCCCCEEEEEeCCCe-------------EEEEEcCCceeeeeeccCCCcccccccccccccC
Q 015290 106 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKT-------------IKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKN 172 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (409)
.....++| +|||+.|+.++.|.. |++|++.++....
T Consensus 168 --------~~~~~~~w--spDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~--------------------- 216 (695)
T 2bkl_A 168 --------GKYATPKW--TPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD--------------------- 216 (695)
T ss_dssp --------CTTCCCEE--CTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC---------------------
T ss_pred --------ccccceEE--ecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc---------------------
Confidence 11257899 899999999988765 6666655443110
Q ss_pred ceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCC----eEEEEEcc
Q 015290 173 FMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDL----RINLWNLE 247 (409)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~----~i~lwd~~ 247 (409)
..+... ..+...+..+.|+|||++|+.+ .++ .|.+|+..
T Consensus 217 -----------------------------------~lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~ 260 (695)
T 2bkl_A 217 -----------------------------------TVVHER-TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG 260 (695)
T ss_dssp -----------------------------------EEEECC-CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT
T ss_pred -----------------------------------eEEEec-CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC
Confidence 111111 3355677899999999999876 554 56666554
Q ss_pred CCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEe---CCCeEEEEeCCCccccccccccccccccccCCccccc
Q 015290 248 ISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS---SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFT 324 (409)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (409)
.+... . +..+...+....+ ++| .+++... .++.|.+||+.++... ....++..+
T Consensus 261 -~~~~~-~-------l~~~~~~~~~~~~-~~g-~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~----------- 317 (695)
T 2bkl_A 261 -EKDFR-L-------LVKGVGAKYEVHA-WKD-RFYVLTDEGAPRQRVFEVDPAKPARA-SWKEIVPED----------- 317 (695)
T ss_dssp -CSSCE-E-------EEECSSCCEEEEE-ETT-EEEEEECTTCTTCEEEEEBTTBCSGG-GCEEEECCC-----------
T ss_pred -CCceE-E-------eecCCCceEEEEe-cCC-cEEEEECCCCCCCEEEEEeCCCCCcc-CCeEEecCC-----------
Confidence 23322 2 2334445556666 677 5444443 2578999998775420 000111110
Q ss_pred ccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEecc-cCcccccccccCCCCccceeeEEEcCCCCeEE
Q 015290 325 EIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIH-EHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA 400 (409)
Q Consensus 325 ~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 400 (409)
....+..++|+ ++.++++.. ++..+||.+...++....+..+ ...+ ..++++||++.|+
T Consensus 318 -~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v---------------~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 318 -SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAA---------------SNLMGLEDLDDAY 378 (695)
T ss_dssp -SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEE---------------CCCBSCTTCSEEE
T ss_pred -CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEE---------------EEeecCCCCCEEE
Confidence 02357778888 667777776 4777777655335555555443 2221 4678889887766
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.60 E-value=1.1e-12 Score=112.85 Aligned_cols=201 Identities=12% Similarity=0.178 Sum_probs=137.4
Q ss_pred CCCcEEEEEE-CCCCCEEEEEec-CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeec-CCCcccccc
Q 015290 31 DVDIVSAIEF-DKTGDYLAVGDR-GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQ-SHEPEFDYL 107 (409)
Q Consensus 31 h~~~v~~v~~-~~~~~~la~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~ 107 (409)
|...+..+++ .++++++++... ++.|.+|+.. ++ .+..+. .+.
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~---------------------------~~~~~~~~~~------ 120 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQ---------------------------FVRKFGATIL------ 120 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SC---------------------------EEEEECTTTC------
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-Cc---------------------------EEEEecCccC------
Confidence 4467899999 578877766643 7899999943 33 122232 222
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..+.++++ +++|+++++...++.|.+||.... ......
T Consensus 121 ------~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~--------------------------------- 158 (286)
T 1q7f_A 121 ------QHPRGVTV--DNKGRIIVVECKVMRVIIFDQNGN-VLHKFG--------------------------------- 158 (286)
T ss_dssp ------SCEEEEEE--CTTSCEEEEETTTTEEEEECTTSC-EEEEEE---------------------------------
T ss_pred ------CCceEEEE--eCCCCEEEEECCCCEEEEEcCCCC-EEEEeC---------------------------------
Confidence 46889999 789988777778899999996533 221110
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
...+...+..++++++++.+++. .++.|.+||.. +..+..+. ..++
T Consensus 159 --------------------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~-----~~g~ 205 (286)
T 1q7f_A 159 --------------------------CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQYLRQIG-----GEGI 205 (286)
T ss_dssp --------------------------CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT--CCEEEEES-----CTTT
T ss_pred --------------------------CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC--CCEEEEEc-----cCCc
Confidence 01233457899999999877777 89999999986 44444421 1223
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCC-eEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRG-FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
...+..++++|+| +++++...++ .|.+||..... +..+..+. ....+.+++++|+|+++++.
T Consensus 206 ~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~g~~-----~~~~~~~~-----------~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 206 TNYPIGVGINSNG-EILIADNHNNFNLTIFTQDGQL-----ISALESKV-----------KHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp SCSEEEEEECTTC-CEEEEECSSSCEEEEECTTSCE-----EEEEEESS-----------CCSCEEEEEEETTTEEEEEE
T ss_pred cCCCcEEEECCCC-CEEEEeCCCCEEEEEECCCCCE-----EEEEcccC-----------CCCcceeEEECCCCcEEEEC
Confidence 3568999999999 8888888776 99999965422 12232210 01246789999999887775
Q ss_pred ecCeEEEEEccC
Q 015290 346 DYMNLKLWDIRM 357 (409)
Q Consensus 346 ~~~~v~iwd~~~ 357 (409)
.++.|++|++..
T Consensus 269 ~~~~v~v~~~~~ 280 (286)
T 1q7f_A 269 KDYRLYIYRYVQ 280 (286)
T ss_dssp TTTEEEEEECSC
T ss_pred CCCeEEEEEccc
Confidence 469999999863
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=1.3e-13 Score=121.39 Aligned_cols=237 Identities=13% Similarity=0.078 Sum_probs=153.4
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
..|.++.|++++..++..+.++.++.|.-. ....+..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~----------- 44 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE------------------------------PWLEISKKG----------- 44 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE------------------------------EEEEEESSC-----------
T ss_pred cccceeeecCCccceeEEeecccCcccccc------------------------------eeEEEeccC-----------
Confidence 457788999988888777778888888321 233445555
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
..+.+++| ++++++++++..++.|.+||..+++.....
T Consensus 45 -~~~~~~~~--~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~--------------------------------------- 82 (333)
T 2dg1_A 45 -LQLEGLNF--DRQGQLFLLDVFEGNIFKINPETKEIKRPF--------------------------------------- 82 (333)
T ss_dssp -CCEEEEEE--CTTSCEEEEETTTCEEEEECTTTCCEEEEE---------------------------------------
T ss_pred -ccccCcEE--CCCCCEEEEECCCCEEEEEeCCCCcEEEEe---------------------------------------
Confidence 56789999 789987778888999999998877543321
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC----CeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD----LRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
..+...+.+++++|+++++++. .+ +.|.+||.. .+.....+. ...+.
T Consensus 83 ----------------------~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~-~~~~~~~~~-----~~~~~ 134 (333)
T 2dg1_A 83 ----------------------VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN-GDNLQDIIE-----DLSTA 134 (333)
T ss_dssp ----------------------ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-SCSCEEEEC-----SSSSC
T ss_pred ----------------------eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC-CCEEEEEEc-----cCccC
Confidence 1234568899999999888877 55 689999987 443332211 01234
Q ss_pred CceEEEEEeCCCCCEEEEEeC------CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCE
Q 015290 268 EVITSAEFHPIYCNLLAYSSS------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH 341 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 341 (409)
..+..++++|+| +++++... .+.|..+|..+++. ..+.. ....+..++|+|+|++
T Consensus 135 ~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~-------------~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 135 YCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTV-----TPIIQ-------------NISVANGIALSTDEKV 195 (333)
T ss_dssp CCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCE-----EEEEE-------------EESSEEEEEECTTSSE
T ss_pred CcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEE-----EEeec-------------CCCcccceEECCCCCE
Confidence 578999999999 87776653 35566666654432 11111 0234678999999987
Q ss_pred EEEe-ec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 342 LLSR-DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 342 l~sg-~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
|+.+ +. +.|.+||+...+..+..+...... .... ...+..++++++|+++++...++.
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~-----~~~~---~~~~~~i~~d~~G~l~v~~~~~~~ 255 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPY-----YFTG---HEGPDSCCIDSDDNLYVAMYGQGR 255 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE-----ECCS---SSEEEEEEEBTTCCEEEEEETTTE
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEE-----ecCC---CCCCCceEECCCCCEEEEEcCCCE
Confidence 6655 33 899999996434443322100000 0000 001157999999987777655543
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=7.5e-12 Score=117.02 Aligned_cols=299 Identities=12% Similarity=0.052 Sum_probs=174.5
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEecc--CCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETV--GGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK 108 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 108 (409)
....+..+.|+|||+++++++.|+.|.+||+. +.+ .+..+...
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~---------------------------~v~~i~~G-------- 239 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT---------------------------TVAEIKIG-------- 239 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC---------------------------EEEEEECC--------
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc---------------------------EeEEEecC--------
Confidence 34467799999999999999999999999985 443 23333332
Q ss_pred cceeccceEEEEEEec----CCCCEEEEEe-CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC-
Q 015290 109 SLEIEEKINRVRWCAA----PNGSMFILST-NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF- 182 (409)
Q Consensus 109 ~~~~~~~v~~l~~~~s----~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 182 (409)
.....++| + |||++++++. .+++|.++|..+.+........... +....+. ....+.....++..
T Consensus 240 -----~~P~~ia~--s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~-~~~~~~~-p~~rva~i~~s~~~~ 310 (567)
T 1qks_A 240 -----SEARSIET--SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT-YDEQEYH-PEPRVAAILASHYRP 310 (567)
T ss_dssp -----SEEEEEEE--CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC-TTTCCEE-SCCCEEEEEECSSSS
T ss_pred -----CCCceeEE--ccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc-ccccccc-CCCceEEEEEcCCCC
Confidence 34678999 7 6999888764 5599999999888776654321100 0000000 00011112212221
Q ss_pred ceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeec-C
Q 015290 183 AHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDM-K 259 (409)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~-~ 259 (409)
.++.. ....+.|.++|........ +..+ ........+.|+|++++++++ .++.|.++|+. +++....+.+ .
T Consensus 311 ~~vv~--~~~~g~v~~vd~~~~~~~~-v~~i--~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~-t~kl~~~i~vgg 384 (567)
T 1qks_A 311 EFIVN--VKETGKILLVDYTDLNNLK-TTEI--SAERFLHDGGLDGSHRYFITAANARNKLVVIDTK-EGKLVAIEDTGG 384 (567)
T ss_dssp EEEEE--ETTTTEEEEEETTCSSEEE-EEEE--ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT-TTEEEEEEECSS
T ss_pred EEEEE--ecCCCeEEEEecCCCccce-eeee--eccccccCceECCCCCEEEEEeCCCCeEEEEECC-CCcEEEEEeccC
Confidence 22222 2346788888876533211 1111 233456688999999998775 78999999999 6777666544 2
Q ss_pred CCcCcCccCceEEEEEeCCCCCEEEEEe-CCCeEEEEeCCCcccc---ccccccccccccccCCcccccccccceeeeEe
Q 015290 260 PSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQSALC---DHSARILRDAAESHGSKSFFTEIIASISDIKF 335 (409)
Q Consensus 260 ~~~~~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 335 (409)
-..|.+.--.+ ++|++..+++++. .++.|.++|....+.. .+.++.+.. ....-..+..
T Consensus 385 ---~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~-------------~g~g~~~i~~ 447 (567)
T 1qks_A 385 ---QTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA-------------LGGGSLFIKT 447 (567)
T ss_dssp ---SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC-------------SCSCCCCEEC
T ss_pred ---cCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec-------------CCCCCEEEEe
Confidence 12343322222 6887525555554 4689999998873311 111122222 0112244778
Q ss_pred ccCCCEEEEee--------cCeEEEEEccCC-----CcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 336 ANDGQHLLSRD--------YMNLKLWDIRMD-----STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 336 s~~g~~l~sg~--------~~~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
+|++++|.+.. .++|.++|+.+. .+.+..+...+- ..+.+ ..-.+..+.|+|+|+++..+
T Consensus 448 ~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 448 HPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEW-----AGITE--GQPRVVQGEFNKDGTEVWFS 520 (567)
T ss_dssp CTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHH-----HTCCS--SCCEEEEEEECTTSSEEEEE
T ss_pred CCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccc-----cccCC--CCcceEeeeECCCCCEEEEE
Confidence 99999888754 259999999863 222244431100 00000 00112689999999987765
Q ss_pred c
Q 015290 403 S 403 (409)
Q Consensus 403 s 403 (409)
.
T Consensus 521 ~ 521 (567)
T 1qks_A 521 V 521 (567)
T ss_dssp E
T ss_pred e
Confidence 3
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.56 E-value=1.4e-13 Score=124.10 Aligned_cols=252 Identities=8% Similarity=-0.038 Sum_probs=137.6
Q ss_pred EEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccc-cceec--
Q 015290 37 AIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLK-SLEIE-- 113 (409)
Q Consensus 37 ~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~-~~~~~-- 113 (409)
.+.|+|||++||.++.++.|.+|++.+++. ......+.. +.+-. .+...
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~---------------------------~~~~~~~~~-~~~~g~~l~~~~~ 136 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEE---------------------------QVIYTVDEE-WKGYGTWVANSDC 136 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCE---------------------------EEEEECCTT-EEEEEEEEECTTS
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCc---------------------------EEEEecccc-cCCCCCEEEeccC
Confidence 378999999999999999999999987652 111111110 00000 00000
Q ss_pred c-----ceEEEEEEecCCCCEEEEE-----eCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCC-CC
Q 015290 114 E-----KINRVRWCAAPNGSMFILS-----TNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP-SF 182 (409)
Q Consensus 114 ~-----~v~~l~~~~s~~~~~l~s~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (409)
. ....+.| +|+++.++.+ ..+..|.+||+.+++...+... ........+++ ++
T Consensus 137 ~~~~~~~~~~~~~--spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~--------------~~~~~~~~~sp~dg 200 (396)
T 3c5m_A 137 TKLVGIEILKRDW--QPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD--------------TAWLGHPIYRPFDD 200 (396)
T ss_dssp SEEEEEEEEGGGC--CCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE--------------SSCEEEEEEETTEE
T ss_pred Ccccccccccccc--CCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC--------------CcccccceECCCCC
Confidence 0 0001345 6788777654 4667899999988776554321 11122223333 33
Q ss_pred ceeeccccccc----ceeEEEecCCcccceeeeeecccc-ccceeEEEeCCCCCeEEEe-cC-----CeEEEEEccCCCc
Q 015290 183 AHGYHLEWTEN----MATKIANVGNSVHARCQKVYPHAH-DFNINSISNNSDCETFVSA-DD-----LRINLWNLEISDQ 251 (409)
Q Consensus 183 ~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~-~d-----~~i~lwd~~~~~~ 251 (409)
..++....... ..|.+|++.... .+.+.... ...+..++|+|+|+.|+.+ .+ +.|++||+. .+.
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~-~g~ 275 (396)
T 3c5m_A 201 STVGFCHEGPHDLVDARMWLVNEDGSN----VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE-TLE 275 (396)
T ss_dssp EEEEEEECSCSSSCSCCCEEEETTSCC----CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT-TCC
T ss_pred CEEEEEecCCCCCCCceEEEEECCCCc----eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC-CCC
Confidence 33333222112 467888875422 12221211 3357889999999987765 33 449999998 454
Q ss_pred eeeeeecCCCcCcCccCceEEEEEeC-CCCCEEEEEe----------------CCCeEEEEeCCCccccccccccccccc
Q 015290 252 CFNIVDMKPSNMDDLTEVITSAEFHP-IYCNLLAYSS----------------SRGFVRLVDMRQSALCDHSARILRDAA 314 (409)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~s----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 314 (409)
...... ..+ .. +.|+| +| +++++++ .++.|.+||+.+++. ..+..+.
T Consensus 276 ~~~l~~-----~~~----~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l~~~~ 339 (396)
T 3c5m_A 276 NEEVMV-----MPP----CS-HLMSNFDG-SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-----QKLCKHS 339 (396)
T ss_dssp EEEEEE-----CCS----EE-EEEECSSS-SEEEEEECCC----------CCCCCCEEEEEETTTTBC-----CEEEECC
T ss_pred eEEeee-----CCC----CC-CCccCCCC-ceEEEecCCcceeeccccccccCCCCcEEEEecccCce-----EEccCCC
Confidence 333211 111 22 89999 99 7777654 347899999987653 2222211
Q ss_pred cccCCccccc-ccccceeeeEeccCCCEEEEeec--CeEEEEEcc
Q 015290 315 ESHGSKSFFT-EIIASISDIKFANDGQHLLSRDY--MNLKLWDIR 356 (409)
Q Consensus 315 ~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~sg~~--~~v~iwd~~ 356 (409)
... ..+. .-...+..++|+|||++|+..++ +...||.+.
T Consensus 340 ~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 340 TSW---DVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCC---CCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred Ccc---ccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 000 0000 00012566899999998887653 544454443
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.55 E-value=1.8e-11 Score=107.32 Aligned_cols=254 Identities=7% Similarity=0.027 Sum_probs=158.3
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
.....+.+. +++++++...++.|.+||..+++. +..+...
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~---------------------------~~~i~~~------------ 83 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE---------------------------VGRITGF------------ 83 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE---------------------------EEEEECC------------
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE---------------------------EEEcCCC------------
Confidence 456777775 355556666789999999988763 3334322
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
.....+++ +++++.+++...++.|.+||..+++............ ....+.+ +.. ....++.+....
T Consensus 84 -~~p~~i~~--~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~----~~~~p~~--i~~----~~~~lyv~~~~~ 150 (328)
T 3dsm_A 84 -TSPRYIHF--LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDM----ESGSTEQ--MVQ----YGKYVYVNCWSY 150 (328)
T ss_dssp -SSEEEEEE--EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCT----TTCBCCC--EEE----ETTEEEEEECTT
T ss_pred -CCCcEEEE--eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccc----cCCCcce--EEE----ECCEEEEEcCCC
Confidence 46788999 5778444444489999999999988765544222000 0000011 111 112222222223
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC----------CeEEEEEccCCCceeeeeecCCC
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD----------LRINLWNLEISDQCFNIVDMKPS 261 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d----------~~i~lwd~~~~~~~~~~~~~~~~ 261 (409)
++.|.++|..+.. .+..+ .. ......++++|+|++++++ .+ +.|.++|.. +++....+.+.
T Consensus 151 ~~~v~viD~~t~~---~~~~i-~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~-t~~v~~~~~~~-- 222 (328)
T 3dsm_A 151 QNRILKIDTETDK---VVDEL-TI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE-TFTVEKQFKFK-- 222 (328)
T ss_dssp CCEEEEEETTTTE---EEEEE-EC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT-TTEEEEEEECC--
T ss_pred CCEEEEEECCCCe---EEEEE-Ec-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC-CCeEEEEEecC--
Confidence 6789999987643 33332 11 2345678999999987777 54 789999998 56655553221
Q ss_pred cCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccC-CC
Q 015290 262 NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND-GQ 340 (409)
Q Consensus 262 ~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-g~ 340 (409)
.......++|+|++ +.|+.+.. .|.+||..+++... ...... .......++++|+ +.
T Consensus 223 ----~g~~p~~la~~~d~-~~lyv~~~--~v~~~d~~t~~~~~--~~~~~~-------------~~~~p~gi~vdp~~g~ 280 (328)
T 3dsm_A 223 ----LGDWPSEVQLNGTR-DTLYWINN--DIWRMPVEADRVPV--RPFLEF-------------RDTKYYGLTVNPNNGE 280 (328)
T ss_dssp ----TTCCCEEEEECTTS-CEEEEESS--SEEEEETTCSSCCS--SCSBCC-------------CSSCEEEEEECTTTCC
T ss_pred ----CCCCceeEEEecCC-CEEEEEcc--EEEEEECCCCceee--eeeecC-------------CCCceEEEEEcCCCCe
Confidence 12357899999998 77776654 89999998876421 011110 0245788999994 55
Q ss_pred EEEEe----ec-CeEEEEEccCCCcceEEEecccCc
Q 015290 341 HLLSR----DY-MNLKLWDIRMDSTPVATFKIHEHL 371 (409)
Q Consensus 341 ~l~sg----~~-~~v~iwd~~~~~~~~~~~~~~~~~ 371 (409)
+.++. .. +.|.+||.. ++.+..+.....+
T Consensus 281 lyva~~~~y~~~~~V~v~d~~--g~~~~~i~~G~~P 314 (328)
T 3dsm_A 281 VYVADAIDYQQQGIVYRYSPQ--GKLIDEFYVGIIP 314 (328)
T ss_dssp EEEEECTTSSSEEEEEEECTT--CCEEEEEEEEESE
T ss_pred EEEEcccccccCCEEEEECCC--CCEEEEEEeccCc
Confidence 55555 44 999999986 7888888765554
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.55 E-value=1.7e-12 Score=113.88 Aligned_cols=212 Identities=11% Similarity=0.102 Sum_probs=140.3
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeee---------cCCC
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEF---------QSHE 101 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~ 101 (409)
+......++++|+|+++++...++.|++|+..+... .+..+ .++-
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~--------------------------~~~~~~~~~~~g~~~~~~ 142 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEG--------------------------PLLILGRSMQPGSDQNHF 142 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSC--------------------------CSEEESBTTBCCCSTTCC
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeE--------------------------EEEEecccCCCCCCcccc
Confidence 345788999999999888888899999999865421 01112 1222
Q ss_pred ccccccccceeccceEEEEEEecC-CCCEEEEEe-CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCC
Q 015290 102 PEFDYLKSLEIEEKINRVRWCAAP-NGSMFILST-NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNP 179 (409)
Q Consensus 102 ~~~~~~~~~~~~~~v~~l~~~~s~-~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (409)
.....|++ ++ ++.++++.+ .++.|++|+.. +............
T Consensus 143 ------------~~P~~ia~--~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~~~~~g~~-------------------- 187 (329)
T 3fvz_A 143 ------------CQPTDVAV--EPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQWGEESSG-------------------- 187 (329)
T ss_dssp ------------SSEEEEEE--CTTTCCEEEEECSSCCEEEEECTT-SCEEEEECEECCS--------------------
T ss_pred ------------CCCcEEEE--eCCCCeEEEEeCCCCCeEEEEcCC-CCEEEEeccCCCC--------------------
Confidence 46889999 78 787777776 68999999954 4333221100000
Q ss_pred CCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCC-CCeEEEe-cCCeEEEEEccCCCceeeeee
Q 015290 180 PSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD-CETFVSA-DDLRINLWNLEISDQCFNIVD 257 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~-~d~~i~lwd~~~~~~~~~~~~ 257 (409)
.. ...++-..+..++++|+ +..+++. .++.|++|+.. +++.+..+.
T Consensus 188 ----------------------------~~---~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~-~G~~~~~~~ 235 (329)
T 3fvz_A 188 ----------------------------SS---PRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD-TKEFVREIK 235 (329)
T ss_dssp ----------------------------SS---CCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT-TCCEEEEEC
T ss_pred ----------------------------CC---CCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC-CCcEEEEEe
Confidence 00 00122345688999998 6666666 89999999998 666666542
Q ss_pred cCCCcCcCccCceEEEEEeCCCCCEEEEE-------eCCCeEEEEeCCCccccccccccccccccccCCcccccccccce
Q 015290 258 MKPSNMDDLTEVITSAEFHPIYCNLLAYS-------SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 330 (409)
Q Consensus 258 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-------s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 330 (409)
...+...+.+++|+| + ..+++. ..+..|++||..+++.. ..+.. ..++...+
T Consensus 236 -----~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~----~~~~~----------~~~~~~~p 294 (329)
T 3fvz_A 236 -----HASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEII----DVFKP----------VRKHFDMP 294 (329)
T ss_dssp -----CTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEE----EEECC----------SSSCCSSE
T ss_pred -----ccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEE----EEEcC----------CCCccCCe
Confidence 234556788999999 4 444433 34558999999887642 22221 01223568
Q ss_pred eeeEeccCCCEEEEeec-CeEEEEEcc
Q 015290 331 SDIKFANDGQHLLSRDY-MNLKLWDIR 356 (409)
Q Consensus 331 ~~~~~s~~g~~l~sg~~-~~v~iwd~~ 356 (409)
..++++|+|.++++... +.|++|++.
T Consensus 295 ~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 295 HDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 89999999976666654 999999986
No 186
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=1.1e-11 Score=107.12 Aligned_cols=232 Identities=9% Similarity=0.069 Sum_probs=149.1
Q ss_pred cEEEEEECCC-CCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 34 IVSAIEFDKT-GDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 34 ~v~~v~~~~~-~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
---...|+|+ +.++++...++.|..||..++.. ..+. ..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~----------------------------~~~~-~~----------- 53 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV----------------------------QRVT-MD----------- 53 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE----------------------------EEEE-CS-----------
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE----------------------------EEEe-CC-----------
Confidence 4457889995 55666666788999999887652 1111 12
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
..+.++++ +++|+++++ . ++.|.+||..+++...+.....
T Consensus 54 -~~~~~i~~--~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~----------------------------------- 93 (297)
T 3g4e_A 54 -APVSSVAL--RQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDN----------------------------------- 93 (297)
T ss_dssp -SCEEEEEE--BTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCT-----------------------------------
T ss_pred -CceEEEEE--CCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCC-----------------------------------
Confidence 57889999 789985444 4 5679999998776544321000
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC---------CeEEEEEccCCCceeeeeecCCCc
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD---------LRINLWNLEISDQCFNIVDMKPSN 262 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d---------~~i~lwd~~~~~~~~~~~~~~~~~ 262 (409)
......++.++++|+|+++++. .. ....+|.+...+.....
T Consensus 94 ----------------------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~------- 144 (297)
T 3g4e_A 94 ----------------------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY------- 144 (297)
T ss_dssp ----------------------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE-------
T ss_pred ----------------------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEE-------
Confidence 1122346789999999977764 32 33466666533332222
Q ss_pred CcCccCceEEEEEeCCCCCEE-EEEeCCCeEEEEeCC--CccccccccccccccccccCCcccccccccceeeeEeccCC
Q 015290 263 MDDLTEVITSAEFHPIYCNLL-AYSSSRGFVRLVDMR--QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG 339 (409)
Q Consensus 263 ~~~~~~~v~~~~~~p~~~~~l-~s~s~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 339 (409)
.........++|+|++ +.| ++.+.++.|.+||+. ++.+.. .+.+.. +..+......++++++|
T Consensus 145 -~~~~~~pngi~~spdg-~~lyv~~~~~~~i~~~~~d~~~G~~~~--~~~~~~----------~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 145 -FDQVDISNGLDWSLDH-KIFYYIDSLSYSVDAFDYDLQTGQISN--RRSVYK----------LEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp -EEEESBEEEEEECTTS-CEEEEEEGGGTEEEEEEECTTTCCEEE--EEEEEE----------CCGGGCEEEEEEEBTTS
T ss_pred -eeccccccceEEcCCC-CEEEEecCCCCcEEEEeccCCCCcccC--cEEEEE----------CCCCCCCCCeeEECCCC
Confidence 1223456899999999 655 556678899999873 443210 011111 11112457789999999
Q ss_pred CEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEc-CCCCeEEEccc
Q 015290 340 QHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVS-GDGLHFATGSY 404 (409)
Q Consensus 340 ~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-pdg~~l~s~s~ 404 (409)
++.++... +.|..||..+ ++.+..+..+...+ ++++|. ||++.|..++.
T Consensus 211 ~lwva~~~~~~v~~~d~~t-G~~~~~i~~p~~~~---------------t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLDPVT-GKRLQTVKLPVDKT---------------TSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEETTTEEEEECTTT-CCEEEEEECSSSBE---------------EEEEEESGGGCEEEEEEB
T ss_pred CEEEEEcCCCEEEEEcCCC-ceEEEEEECCCCCc---------------eEEEEeCCCCCEEEEEcC
Confidence 87777655 8899999875 78888887664433 699998 88887665443
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=1.1e-10 Score=100.80 Aligned_cols=272 Identities=7% Similarity=-0.027 Sum_probs=166.9
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 31 DVDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
+...+.+++++++|+++++...++.|.+||.. +... ...+..+.
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~--------------------------~~~~~~~~--------- 56 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT--------------------------EYPLPTPD--------- 56 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE--------------------------EEECSSTT---------
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE--------------------------EecCCccc---------
Confidence 34679999999999987776667899999987 4310 01111222
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
..+.++++ +++|..+++...++.|..|+.. ++..... ... .......+...+++.+......
T Consensus 57 ---~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~-----------~~~~~~~i~~~~~g~l~v~~~~ 118 (299)
T 2z2n_A 57 ---AKVMCLTI--SSDGEVWFTENAANKIGRITKK-GIIKEYT-LPN-----------PDSAPYGITEGPNGDIWFTEMN 118 (299)
T ss_dssp ---CCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCEEEEE-CSS-----------TTCCEEEEEECTTSCEEEEETT
T ss_pred ---CceeeEEE--CCCCCEEEeCCCCCeEEEECCC-CcEEEEe-CCC-----------cCCCceeeEECCCCCEEEEecC
Confidence 57889999 7899887777778889999986 3332221 100 0011112222223332222211
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 269 (409)
++.+..++... .............+..+++.++++.+++. .++.|..||.. +..... . .......
T Consensus 119 --~~~i~~~d~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~-~-----~~~~~~~ 184 (299)
T 2z2n_A 119 --GNRIGRITDDG----KIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITES--GDITEF-K-----IPTPASG 184 (299)
T ss_dssp --TTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--CCEEEE-E-----CSSTTCC
T ss_pred --CceEEEECCCC----CEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCC--CcEEEe-e-----CCCCCCc
Confidence 45677777622 11111112344568899999999888777 78899999983 333222 1 2233456
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cC
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YM 348 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~ 348 (409)
+..++++++| .++++...++.|.+||. +++. ..+.. ..+...+.+++++++|++.++.. ++
T Consensus 185 ~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~-----~~~~~-----------~~~~~~~~~i~~~~~g~l~v~~~~~~ 246 (299)
T 2z2n_A 185 PVGITKGNDD-ALWFVEIIGNKIGRITT-SGEI-----TEFKI-----------PTPNARPHAITAGAGIDLWFTEWGAN 246 (299)
T ss_dssp EEEEEECTTS-SEEEEETTTTEEEEECT-TCCE-----EEEEC-----------SSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred ceeEEECCCC-CEEEEccCCceEEEECC-CCcE-----EEEEC-----------CCCCCCceeEEECCCCCEEEeccCCc
Confidence 8899999998 87777777889999998 5542 11111 01134688999999998766654 48
Q ss_pred eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 349 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 349 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
.|..||.. ++ +..+...... ..+.++++ ++|.+.++.+.+
T Consensus 247 ~i~~~d~~--g~-~~~~~~~~~~-------------~~~~~i~~-~~g~l~v~~~~~ 286 (299)
T 2z2n_A 247 KIGRLTSN--NI-IEEYPIQIKS-------------AEPHGICF-DGETIWFAMECD 286 (299)
T ss_dssp EEEEEETT--TE-EEEEECSSSS-------------CCEEEEEE-CSSCEEEEETTT
T ss_pred eEEEECCC--Cc-eEEEeCCCCC-------------CccceEEe-cCCCEEEEecCC
Confidence 99999983 43 3333211110 01258889 899877775544
No 188
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=1.5e-11 Score=107.15 Aligned_cols=234 Identities=10% Similarity=0.113 Sum_probs=146.0
Q ss_pred CcEEEEEECCCCCEEEE-------EecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeee--ecCCCcc
Q 015290 33 DIVSAIEFDKTGDYLAV-------GDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTE--FQSHEPE 103 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~-------~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~ 103 (409)
....+++|+++|+++++ +..++.|.+||..+++.. .+.. ..++.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-------------------------~~~~~~~~~~~-- 70 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-------------------------VICKPEVNGYG-- 70 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-------------------------EEECCEETTEE--
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-------------------------EEEecccCCCC--
Confidence 34679999999988887 677899999998766520 0000 01122
Q ss_pred ccccccceeccceEEEEEEecCC-CCEEEEEeCCCeEEEEEcCCceeeee-eccCCCcccccccccccccCceeccCCCC
Q 015290 104 FDYLKSLEIEEKINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQKVKKI-KEMDHFPFVSSENTLLAEKNFMNEHNPPS 181 (409)
Q Consensus 104 ~~~~~~~~~~~~v~~l~~~~s~~-~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (409)
..+.++.+ +++ ++ |..++..+.|.+||.. ++.... ....
T Consensus 71 ----------~~~~~i~~--~~~~g~-l~v~~~~~~l~~~d~~-g~~~~~~~~~~------------------------- 111 (314)
T 1pjx_A 71 ----------GIPAGCQC--DRDANQ-LFVADMRLGLLVVQTD-GTFEEIAKKDS------------------------- 111 (314)
T ss_dssp ----------CCEEEEEE--CSSSSE-EEEEETTTEEEEEETT-SCEEECCSBCT-------------------------
T ss_pred ----------CCCceEEE--ecCCCc-EEEEECCCCEEEEeCC-CCEEEEEeccC-------------------------
Confidence 57889999 688 65 4444444578889987 554322 1100
Q ss_pred CceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC---------------CeEEEEE
Q 015290 182 FAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD---------------LRINLWN 245 (409)
Q Consensus 182 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d---------------~~i~lwd 245 (409)
.......+.+++++++|+.+++. .+ +.|..|+
T Consensus 112 --------------------------------~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (314)
T 1pjx_A 112 --------------------------------EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFT 159 (314)
T ss_dssp --------------------------------TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred --------------------------------CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEEC
Confidence 01122356789999999887776 54 4566666
Q ss_pred ccCCCceeeeeecCCCcCcCccCceEEEEEe----CCCCCEEE-EEeCCCeEEEEeCC-CccccccccccccccccccCC
Q 015290 246 LEISDQCFNIVDMKPSNMDDLTEVITSAEFH----PIYCNLLA-YSSSRGFVRLVDMR-QSALCDHSARILRDAAESHGS 319 (409)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----p~~~~~l~-s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~ 319 (409)
.. +..... ..+......++|+ |++ +.++ +...++.|.+||.. .++... ...+..
T Consensus 160 ~~--g~~~~~--------~~~~~~~~~i~~~~~~d~dg-~~l~v~~~~~~~i~~~~~~~~g~~~~--~~~~~~------- 219 (314)
T 1pjx_A 160 TD--GQMIQV--------DTAFQFPNGIAVRHMNDGRP-YQLIVAETPTKKLWSYDIKGPAKIEN--KKVWGH------- 219 (314)
T ss_dssp TT--SCEEEE--------EEEESSEEEEEEEECTTSCE-EEEEEEETTTTEEEEEEEEETTEEEE--EEEEEE-------
T ss_pred CC--CCEEEe--------ccCCCCcceEEEecccCCCC-CEEEEEECCCCeEEEEECCCCCcccc--ceEEEE-------
Confidence 54 332222 1223456889999 998 6554 44567899999976 332110 011111
Q ss_pred cccccccc-cceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC
Q 015290 320 KSFFTEII-ASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 397 (409)
Q Consensus 320 ~~~~~~~~-~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 397 (409)
+.++. ..+..++++++|+++++.. ++.|.+||..+ ++.+..+..+...+ .+++|+|+|+
T Consensus 220 ---~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~---------------~~i~~~~dg~ 280 (314)
T 1pjx_A 220 ---IPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKP---------------SNLHFKPQTK 280 (314)
T ss_dssp ---CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC-BSCSEEEECSSSCE---------------EEEEECTTSS
T ss_pred ---CCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCc---------------eeEEECCCCC
Confidence 11112 3567899999998887765 48999999874 66666665543322 5899999999
Q ss_pred eEEEcc
Q 015290 398 HFATGS 403 (409)
Q Consensus 398 ~l~s~s 403 (409)
.|..++
T Consensus 281 ~l~v~~ 286 (314)
T 1pjx_A 281 TIFVTE 286 (314)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555443
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.52 E-value=1.7e-12 Score=114.85 Aligned_cols=213 Identities=14% Similarity=0.116 Sum_probs=133.3
Q ss_pred CCCcEEEEEECCCCCEEEEEe---------cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCC
Q 015290 31 DVDIVSAIEFDKTGDYLAVGD---------RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHE 101 (409)
Q Consensus 31 h~~~v~~v~~~~~~~~la~~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 101 (409)
....+..+++ ||+++|... .++.|.+|++.+++. ..+
T Consensus 13 ~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~----------------------------~~l---- 58 (347)
T 2gop_A 13 KFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR----------------------------RFI---- 58 (347)
T ss_dssp CSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE----------------------------EEE----
T ss_pred eeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce----------------------------EEc----
Confidence 3467888888 899887653 256788999887652 111
Q ss_pred ccccccccceeccceEEEEEEecCCCCEEEEEeCC---C--eEEEEEcCCceeeeeeccCCCcccccccccccccCceec
Q 015290 102 PEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTND---K--TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNE 176 (409)
Q Consensus 102 ~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d---~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (409)
..+..++| +|||+.|+.++.+ + .|.+|++.+++.....
T Consensus 59 ------------~~~~~~~~--SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~----------------------- 101 (347)
T 2gop_A 59 ------------ENATMPRI--SPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL----------------------- 101 (347)
T ss_dssp ------------ESCEEEEE--CTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE-----------------------
T ss_pred ------------ccCCCeEE--CCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE-----------------------
Confidence 25778899 8999999887643 2 3666777666543321
Q ss_pred cCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC-----------------
Q 015290 177 HNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD----------------- 238 (409)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d----------------- 238 (409)
.+.. +..++|+|+|+.|+.+ .+
T Consensus 102 ---------------------------------------~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 102 ---------------------------------------EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp ---------------------------------------EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred ---------------------------------------cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 1223 7889999999988876 42
Q ss_pred ----------CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCC-------eEEEEeCCCcc
Q 015290 239 ----------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG-------FVRLVDMRQSA 301 (409)
Q Consensus 239 ----------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg-------~i~iwd~~~~~ 301 (409)
..|.+||+. .+..+..+ .. . .+..+.|+|+| ++++++.++ ...+|.+.+++
T Consensus 142 ~g~~~~~~~~~~l~~~d~~-~~~~~~~l-------~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTE-SEEVIEEF-------EK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp --------CEEEEEEEETT-TTEEEEEE-------EE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTE
T ss_pred cCcccccCccceEEEEECC-CCeEEeee-------cC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCc
Confidence 568899987 55542332 22 2 67889999998 666665432 33444433332
Q ss_pred ccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c--------CeEEEEEccCCCcceEEEecccCcc
Q 015290 302 LCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y--------MNLKLWDIRMDSTPVATFKIHEHLR 372 (409)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~--------~~v~iwd~~~~~~~~~~~~~~~~~~ 372 (409)
. ..+.. + ..+..+ +|||++|+.++ + ..|.+|| . ++.......+...+
T Consensus 210 ~-----~~l~~-------------~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~ 265 (347)
T 2gop_A 210 E-----EKMFE-------------K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGV 265 (347)
T ss_dssp E-----EEEEE-------------E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEE
T ss_pred e-----EEecc-------------C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCccc
Confidence 1 22211 1 233333 99999888664 2 3677787 2 44433333333332
Q ss_pred cccccccCCCCccceee-EEEcCCCCeEEEcccCCC
Q 015290 373 PKLCDLYNNDSIFDKFE-CSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 373 ~~~~~~~~~~~~~~v~~-~~~spdg~~l~s~s~dg~ 407 (409)
.. +.|+ || ++++++.++.
T Consensus 266 ---------------~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 266 ---------------GQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp ---------------EEEEEET-TE-EEEEEEETTE
T ss_pred ---------------CCccEEc-Cc-EEEEEecCCc
Confidence 34 8899 88 8888888764
No 190
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.51 E-value=4.6e-12 Score=112.56 Aligned_cols=237 Identities=11% Similarity=0.062 Sum_probs=136.8
Q ss_pred EEEECCCCCEEEEEe----------cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 37 AIEFDKTGDYLAVGD----------RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 37 ~v~~~~~~~~la~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
.++|+|||++++++. .++.|.+||..+.+. +..+......
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~---------------------------~~~i~~~~~~--- 103 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF---------------------------EKEISLPPKR--- 103 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE---------------------------EEEEEECTTB---
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE---------------------------EEEEEcCccc---
Confidence 899999999999886 367899999886652 2222211000
Q ss_pred cccceeccceEEEEEEecCCCCEEEEEeC--CCeEEEEEcCCceeeee-eccCCCccc-------ccccccccccCceec
Q 015290 107 LKSLEIEEKINRVRWCAAPNGSMFILSTN--DKTIKLWKVRDQKVKKI-KEMDHFPFV-------SSENTLLAEKNFMNE 176 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~~l~s~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~ 176 (409)
.........+++ +|+|++|+++.. +++|.+||+.+++.... ........+ ........++.....
T Consensus 104 ---~~~g~~p~~i~~--spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v 178 (361)
T 2oiz_A 104 ---VQGLNYDGLFRQ--TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTI 178 (361)
T ss_dssp ---CCBCCCGGGEEE--CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEE
T ss_pred ---cccCCCcceEEE--CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEE
Confidence 000034667889 899999998863 68999999998876654 332110000 000000011111110
Q ss_pred cCCC---------------------------CCceeecccccccceeEEEecCCcccceeeeee-ccc----c----ccc
Q 015290 177 HNPP---------------------------SFAHGYHLEWTENMATKIANVGNSVHARCQKVY-PHA----H----DFN 220 (409)
Q Consensus 177 ~~~~---------------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~----~----~~~ 220 (409)
.... ....++.. ..++.+.++|+..... .....+ ... + ...
T Consensus 179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~v~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~p~g 255 (361)
T 2oiz_A 179 NLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFV--SYYGNVYSADFSGDEV-KVDGPWSLLNDEDKAKNWVPGG 255 (361)
T ss_dssp EECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEE--BTTSEEEEEECSSSSC-EEEEEEESCCHHHHHTTCEECC
T ss_pred EECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEE--eCCCeEEEEEecCCCc-eecccccccCccccccccccCC
Confidence 0000 00011111 1245677777753211 111110 000 0 011
Q ss_pred eeEEEeCCCCCeEEEe-c-----------CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC
Q 015290 221 INSISNNSDCETFVSA-D-----------DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS 288 (409)
Q Consensus 221 v~~l~~~~~~~~l~~~-~-----------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~ 288 (409)
...++++|+++.++++ . .+.|.+||+. +.+.+..+ ..+. +.+++|+|+| ++|++++.
T Consensus 256 ~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~-t~~~v~~i-------~~~~--p~~ia~spdg-~~l~v~n~ 324 (361)
T 2oiz_A 256 YNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTK-TKQRVARI-------PGRD--ALSMTIDQQR-NLMLTLDG 324 (361)
T ss_dssp SSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETT-TTEEEEEE-------ECTT--CCEEEEETTT-TEEEEECS
T ss_pred eeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECC-CCcEEEEE-------ecCC--eeEEEECCCC-CEEEEeCC
Confidence 1237899998888776 4 3479999998 67777663 3343 8899999999 88888876
Q ss_pred CCeEEEEeCCCc--cccccccccccccccccCCcccccccccceeeeEeccCCC
Q 015290 289 RGFVRLVDMRQS--ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 340 (409)
Q Consensus 289 dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 340 (409)
+.|.+||..++ +. +..+.. +......++++|+|+
T Consensus 325 -~~v~v~D~~t~~l~~----~~~i~~-------------~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 325 -GNVNVYDISQPEPKL----LRTIEG-------------AAEASLQVQFHPVGG 360 (361)
T ss_dssp -SCEEEEECSSSSCEE----EEEETT-------------SCSSEEEEEECCCSC
T ss_pred -CeEEEEECCCCccee----eEEecc-------------CCCCcEEEEecCCCC
Confidence 99999999998 53 222211 124567899999985
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.51 E-value=2.9e-11 Score=113.05 Aligned_cols=204 Identities=11% Similarity=0.051 Sum_probs=142.9
Q ss_pred CCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccceEEEEE
Q 015290 42 KTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRW 121 (409)
Q Consensus 42 ~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~ 121 (409)
|.+.++++...++.|.++|..+++. +..+... ..+..+.|
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v---------------------------~~~i~~g-------------~~p~~v~~ 204 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEI---------------------------KTVLDTG-------------YAVHISRL 204 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCE---------------------------EEEEECS-------------SCEEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeE---------------------------EEEEeCC-------------CCccceEE
Confidence 4456677777899999999988763 3334332 35678999
Q ss_pred EecCCCCEEEEEeCCCeEEEEEcC--CceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEE
Q 015290 122 CAAPNGSMFILSTNDKTIKLWKVR--DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIA 199 (409)
Q Consensus 122 ~~s~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 199 (409)
+|||+++++++.|+.|.+||+. +.+......
T Consensus 205 --SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~--------------------------------------------- 237 (567)
T 1qks_A 205 --SASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK--------------------------------------------- 237 (567)
T ss_dssp --CTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE---------------------------------------------
T ss_pred --CCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe---------------------------------------------
Confidence 8999999999999999999995 443322211
Q ss_pred ecCCcccceeeeeeccccccceeEEEeC----CCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCc---CccC-c
Q 015290 200 NVGNSVHARCQKVYPHAHDFNINSISNN----SDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMD---DLTE-V 269 (409)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~---~~~~-~ 269 (409)
. ......++|+ |+|++++++ .++++.++|.. +.+.+..+........ .|.. .
T Consensus 238 ---------------~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~-t~~~~~~i~~~~~~~~~~~~~p~~r 299 (567)
T 1qks_A 238 ---------------I--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE-TLEPKKIQSTRGMTYDEQEYHPEPR 299 (567)
T ss_dssp ---------------C--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT-TCCEEEEEECCEECTTTCCEESCCC
T ss_pred ---------------c--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC-CCcEEEEEeccccccccccccCCCc
Confidence 1 1234689999 699999887 68999999988 6777776544321111 1222 6
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y- 347 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~- 347 (409)
+..+..+++++.+++....+|.|.++|....+.. .+..+.. ......+.|+|+|+++++++ .
T Consensus 300 va~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~--~v~~i~~--------------~~~~~d~~~~pdgr~~~va~~~s 363 (567)
T 1qks_A 300 VAAILASHYRPEFIVNVKETGKILLVDYTDLNNL--KTTEISA--------------ERFLHDGGLDGSHRYFITAANAR 363 (567)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE--EEEEEEC--------------CSSEEEEEECTTSCEEEEEEGGG
T ss_pred eEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc--eeeeeec--------------cccccCceECCCCCEEEEEeCCC
Confidence 7889999988566666777899999998764310 0111111 23466789999999988775 3
Q ss_pred CeEEEEEccCCCcceEEEec
Q 015290 348 MNLKLWDIRMDSTPVATFKI 367 (409)
Q Consensus 348 ~~v~iwd~~~~~~~~~~~~~ 367 (409)
+.|.++|+.+ ++.+..+..
T Consensus 364 n~V~ViD~~t-~kl~~~i~v 382 (567)
T 1qks_A 364 NKLVVIDTKE-GKLVAIEDT 382 (567)
T ss_dssp TEEEEEETTT-TEEEEEEEC
T ss_pred CeEEEEECCC-CcEEEEEec
Confidence 9999999986 777766654
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.46 E-value=1e-11 Score=121.28 Aligned_cols=240 Identities=13% Similarity=0.059 Sum_probs=134.8
Q ss_pred CcEEEEEECCCCCEEEEEecC-----CeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccc
Q 015290 33 DIVSAIEFDKTGDYLAVGDRG-----GRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYL 107 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 107 (409)
..+..++|||||++||.++.+ ..|++||+.+++. +. ...+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~---------------------------~~-~~~~~------ 208 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP---------------------------LA-DELKW------ 208 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE---------------------------EE-EEEEE------
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC---------------------------CC-ccCCC------
Confidence 478899999999999987654 3699999998763 11 01111
Q ss_pred ccceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 108 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 108 ~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
..+..++| +|| +.|+.++.|+..+ .+.....
T Consensus 209 ------~~~~~~~w--spD-~~l~~~~~~~~~~-----~~~~~~~----------------------------------- 239 (741)
T 1yr2_A 209 ------VKFSGLAW--LGN-DALLYSRFAEPKE-----GQAFQAL----------------------------------- 239 (741)
T ss_dssp ------EESCCCEE--STT-SEEEEEECCCC-------------C-----------------------------------
T ss_pred ------ceeccEEE--ECC-CEEEEEEecCccc-----ccccccC-----------------------------------
Confidence 22357889 789 8998887765410 0000000
Q ss_pred ccccccceeEEEecCCcccce-eeeeeccccccceeEEEeCCCCCeEEEe-cCC-----eEEEEEccCCC--ceeeeeec
Q 015290 188 LEWTENMATKIANVGNSVHAR-CQKVYPHAHDFNINSISNNSDCETFVSA-DDL-----RINLWNLEISD--QCFNIVDM 258 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~-----~i~lwd~~~~~--~~~~~~~~ 258 (409)
.....|++|++.+..... .+... ..+...+..+.|+|||++|+.. .++ .|++||+. .+ .....
T Consensus 240 ---~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~-~~~~~~~~~--- 311 (741)
T 1yr2_A 240 ---NYNQTVWLHRLGTPQSADQPVFAT-PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT-NGKIGPVTA--- 311 (741)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE-TTEECCCEE---
T ss_pred ---CCCCEEEEEECCCCchhCEEEecc-CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC-CCCCcccEE---
Confidence 001124444443322111 11110 2233357889999999998876 543 89999997 33 21233
Q ss_pred CCCcCcCccCceEEEEEeCCCCCEEEEEeC----CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeE
Q 015290 259 KPSNMDDLTEVITSAEFHPIYCNLLAYSSS----RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIK 334 (409)
Q Consensus 259 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 334 (409)
+..+...+... ++|+| ..|+..+. ++.|.+||+.++. .....++.. +...+..++
T Consensus 312 ----l~~~~~~~~~~-~~~dg-~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~~l~~~-------------~~~~l~~~~ 370 (741)
T 1yr2_A 312 ----LIPDLKAQWDF-VDGVG-DQLWFVSGDGAPLKKIVRVDLSGST--PRFDTVVPE-------------SKDNLESVG 370 (741)
T ss_dssp ----EECSSSSCEEE-EEEET-TEEEEEECTTCTTCEEEEEECSSSS--CEEEEEECC-------------CSSEEEEEE
T ss_pred ----ecCCCCceEEE-EeccC-CEEEEEECCCCCCCEEEEEeCCCCc--cccEEEecC-------------CCCeEEEEE
Confidence 22233334444 34888 77776664 3459999987642 000112211 123466777
Q ss_pred eccCCCEEEEee-cCeEEEEEccCCCcceEEEecc-cCcccccccccCCCCccceeeEEEcCCCCeEE
Q 015290 335 FANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIH-EHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA 400 (409)
Q Consensus 335 ~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 400 (409)
|+ ++.++++.. ++..+||.+...++....+..+ ...+ ..++++||++.|+
T Consensus 371 ~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v---------------~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 371 IA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSA---------------SGLSGRPGDRHAY 422 (741)
T ss_dssp EE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEE---------------EEEECCBTCSCEE
T ss_pred EE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEE---------------EEeecCCCCCEEE
Confidence 77 456666665 4666666554335555555432 2221 4788999988666
No 193
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=8e-11 Score=102.09 Aligned_cols=231 Identities=9% Similarity=-0.001 Sum_probs=147.7
Q ss_pred CCCcEEEEEECCCCC-EEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 31 DVDIVSAIEFDKTGD-YLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 31 h~~~v~~v~~~~~~~-~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
.........|+|+|+ +++++..++.|..|+.. +. ...+..+.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~----------------------------~~~~~~~~-------- 85 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT----------------------------VDVLLDAT-------- 85 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC----------------------------EEEEEESC--------
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC----------------------------EEEEeCCC--------
Confidence 455677899999998 56677778899999873 32 12233333
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
..+..+++ +++|+++++...++.|.+|+.. ++.......
T Consensus 86 ----~~~~gl~~--d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~---------------------------------- 124 (305)
T 3dr2_A 86 ----AFTNGNAV--DAQQRLVHCEHGRRAITRSDAD-GQAHLLVGR---------------------------------- 124 (305)
T ss_dssp ----SCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCEEEEECE----------------------------------
T ss_pred ----CccceeeE--CCCCCEEEEECCCCEEEEECCC-CCEEEEEec----------------------------------
Confidence 57889999 7899866665666889999875 443222110
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEE----e-c-------------CCeEEEEEccCCCc
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS----A-D-------------DLRINLWNLEISDQ 251 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~----~-~-------------d~~i~lwd~~~~~~ 251 (409)
........++.++++|+|+++++ | . .+.|..||.. .+.
T Consensus 125 -----------------------~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-~g~ 180 (305)
T 3dr2_A 125 -----------------------YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-GSP 180 (305)
T ss_dssp -----------------------ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-SCC
T ss_pred -----------------------cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC-CCc
Confidence 00011234567899999988886 4 2 2456666654 333
Q ss_pred eeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC------CeEEEEeCCCccccccccccccccccccCCcccccc
Q 015290 252 CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR------GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTE 325 (409)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (409)
.... . .......++|+|++ +.|+.+... +.|.+||+..+.+. ....+.. .
T Consensus 181 ~~~~--------~-~~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l~--~~~~~~~------------~ 236 (305)
T 3dr2_A 181 LQRM--------A-DLDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGALH--DRRHFAS------------V 236 (305)
T ss_dssp CEEE--------E-EESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTEEE--EEEEEEC------------C
T ss_pred EEEE--------e-cCCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCCcc--CCeEEEE------------C
Confidence 3222 1 22356789999999 866666554 78999998754311 0111111 0
Q ss_pred cccceeeeEeccCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccC
Q 015290 326 IIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYR 405 (409)
Q Consensus 326 ~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~d 405 (409)
.......++++++|++.++. .+.|.+|+.. ++.+..+..+... .+++|+|+++.|..++.+
T Consensus 237 ~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~--g~~~~~~~~~~~~----------------~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 237 PDGLPDGFCVDRGGWLWSSS-GTGVCVFDSD--GQLLGHIPTPGTA----------------SNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp SSSCCCSEEECTTSCEEECC-SSEEEEECTT--SCEEEEEECSSCC----------------CEEEECTTSCEEEEEETT
T ss_pred CCCCCCeEEECCCCCEEEec-CCcEEEECCC--CCEEEEEECCCce----------------eEEEEeCCCCEEEEEcCC
Confidence 01345678999999955544 4559999974 7777777765532 489999999888877665
Q ss_pred C
Q 015290 406 R 406 (409)
Q Consensus 406 g 406 (409)
+
T Consensus 298 ~ 298 (305)
T 3dr2_A 298 C 298 (305)
T ss_dssp E
T ss_pred e
Confidence 4
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.44 E-value=4.6e-11 Score=105.01 Aligned_cols=271 Identities=11% Similarity=0.091 Sum_probs=156.0
Q ss_pred EEEECCCCCEEEEEe----------cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccc
Q 015290 37 AIEFDKTGDYLAVGD----------RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDY 106 (409)
Q Consensus 37 ~v~~~~~~~~la~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 106 (409)
.++++|||++++++. .++.|.+||..+.+. +.++.-...
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v---------------------------~~~I~v~~g---- 130 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP---------------------------TADIELPDA---- 130 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE---------------------------EEEEEETTC----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE---------------------------EEEEECCCc----
Confidence 499999999888775 367899999988763 222210000
Q ss_pred cccceeccceEEEEEEecCCCCEEEEEeC--CCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCce
Q 015290 107 LKSLEIEEKINRVRWCAAPNGSMFILSTN--DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 184 (409)
Q Consensus 107 ~~~~~~~~~v~~l~~~~s~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (409)
...........+.+ +|||++++++.. ++.|.++|+.+++.......... ....+..... +
T Consensus 131 -~r~~~g~~P~~~a~--spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-----~~~~P~g~~~----------~ 192 (386)
T 3sjl_D 131 -PRFLVGTYPWMTSL--TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-----YHIFPTAPDT----------F 192 (386)
T ss_dssp -CCCCBSCCGGGEEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EEEEEEETTE----------E
T ss_pred -cccccCCCCceEEE--cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-----ceeecCCCce----------e
Confidence 00000023456888 899999988864 68999999999988766542110 0000100000 0
Q ss_pred eecccccccceeEEEecCCcccceeee-eeccccccce-eEEEe-CCCCCeEEEecCCeEEEEEccCCC-ceeeeeecCC
Q 015290 185 GYHLEWTENMATKIANVGNSVHARCQK-VYPHAHDFNI-NSISN-NSDCETFVSADDLRINLWNLEISD-QCFNIVDMKP 260 (409)
Q Consensus 185 ~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~v-~~l~~-~~~~~~l~~~~d~~i~lwd~~~~~-~~~~~~~~~~ 260 (409)
. ....||.+-+.++.......... ..+.....++ ...+| .++|++++...+|.+.+.|+.... .....+.+-.
T Consensus 193 ~---~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~ 269 (386)
T 3sjl_D 193 F---MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALT 269 (386)
T ss_dssp E---EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSC
T ss_pred E---EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccc
Confidence 0 11225555555554311110000 0111111222 12355 467766666678999999997222 1222221000
Q ss_pred C---cCcCccCceEEEEEeCCCCCEEEEEeC----------CCeEEEEeCCCccccccccccccccccccCCcccccccc
Q 015290 261 S---NMDDLTEVITSAEFHPIYCNLLAYSSS----------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 327 (409)
Q Consensus 261 ~---~~~~~~~~v~~~~~~p~~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (409)
. ......+....++++|++ +.++.... .+.|.+.|+.+++. ++.+.. .
T Consensus 270 ~~~~~~g~~p~g~q~~a~~~~~-~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv----~~~i~v--------------g 330 (386)
T 3sjl_D 270 EAERADGWRPGGWQQVAYHRAL-DRIYLLVDQRDEWRHKTASRFVVVLDAKTGER----LAKFEM--------------G 330 (386)
T ss_dssp HHHHHTTEEECSSSCEEEETTT-TEEEEEEEECCTTCTTSCEEEEEEEETTTCCE----EEEEEE--------------E
T ss_pred cccccccccCCCcceeeECCCC-CeEEEEeccccccccCCCCCEEEEEECCCCeE----EEEEEC--------------C
Confidence 0 000012233457779998 65555432 25799999999775 244443 2
Q ss_pred cceeeeEeccCCC-EEEEee--cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCC
Q 015290 328 ASISDIKFANDGQ-HLLSRD--YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD 395 (409)
Q Consensus 328 ~~i~~~~~s~~g~-~l~sg~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd 395 (409)
..++.+++++|++ +|++.. ++.|.++|..+ ++.+.++.....+. .+.+++|
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t-~k~~~~i~~~~~p~----------------~l~~s~d 384 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES-GEELRSVNQLGHGP----------------QVITTAD 384 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTT-CCEEEEECCCCSSC----------------CEEEECC
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC-CcEEEEecCCCCCc----------------eeEECCc
Confidence 4688999999997 666653 49999999987 89999998776663 6888777
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=1.7e-09 Score=93.18 Aligned_cols=270 Identities=6% Similarity=-0.060 Sum_probs=164.3
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...+.+++++++|++.++...++.|.+|+.. ++. .. ..+..+.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-------------------------~~-~~~~~~~---------- 61 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-------------------------KE-FEVPTPD---------- 61 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-------------------------EE-EECSSTT----------
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-------------------------EE-EECCCCC----------
Confidence 4578999999999988777678999999977 432 00 1112222
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
..+.++++ ++++.++++...++.|..+|.. ++.......... .........+.+.+.....
T Consensus 62 --~~~~~i~~--~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~------------~~~~~i~~~~~g~l~v~~~-- 122 (300)
T 2qc5_A 62 --AKVMCLIV--SSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD------------SGPYGITEGLNGDIWFTQL-- 122 (300)
T ss_dssp --CCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT------------CCEEEEEECSTTCEEEEET--
T ss_pred --CcceeEEE--CCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC------------CCCccceECCCCCEEEEcc--
Confidence 57889999 7888877777768889999987 544322110000 1111111122222222211
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
.++.+..++.+. +............+..+++.++++.+++. .++.|..+|.. +..... . .......+
T Consensus 123 ~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~--g~~~~~-~-----~~~~~~~~ 190 (300)
T 2qc5_A 123 NGDRIGKLTADG----TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT--GKLEEY-P-----LPTNAAAP 190 (300)
T ss_dssp TTTEEEEECTTS----CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT--CCEEEE-E-----CSSTTCCE
T ss_pred CCCeEEEECCCC----CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC--CcEEEe-e-----CCCCCCCc
Confidence 144666676642 11111112344568899999999866666 68899999874 333222 1 22334568
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-Ce
Q 015290 271 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MN 349 (409)
Q Consensus 271 ~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~ 349 (409)
..++++++| +++++....+.|.+||. +++. ..+.. ......+.+++++++|++.++... +.
T Consensus 191 ~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~-----~~~~~-----------~~~~~~~~~i~~d~~g~l~v~~~~~~~ 252 (300)
T 2qc5_A 191 VGITSGNDG-ALWFVEIMGNKIGRITT-TGEI-----SEYDI-----------PTPNARPHAITAGKNSEIWFTEWGANQ 252 (300)
T ss_dssp EEEEECTTS-SEEEEETTTTEEEEECT-TCCE-----EEEEC-----------SSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred ceEEECCCC-CEEEEccCCCEEEEEcC-CCcE-----EEEEC-----------CCCCCCceEEEECCCCCEEEeccCCCe
Confidence 899999998 88877777788999998 4332 11111 001245788999999986666644 89
Q ss_pred EEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 350 LKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 350 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
|..||.. ++.. .+...... ..+.+++++++|++.++..
T Consensus 253 i~~~~~~--g~~~-~~~~~~~~-------------~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 253 IGRITND--NTIQ-EYQLQTEN-------------AEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EEEECTT--SCEE-EEECCSTT-------------CCCCCEEECTTSCEEEECS
T ss_pred EEEECCC--CcEE-EEECCccC-------------CccceeEeCCCCCEEEEcc
Confidence 9999973 4332 33221110 0115899999998776654
No 196
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.42 E-value=3.4e-10 Score=99.00 Aligned_cols=230 Identities=10% Similarity=0.030 Sum_probs=142.7
Q ss_pred cEEEEEECCCC-CEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 34 IVSAIEFDKTG-DYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 34 ~v~~v~~~~~~-~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
-.....|+|++ .++++...++.|..||..+++. ..+. ..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~----------------------------~~~~-~~----------- 89 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK----------------------------TVHA-LP----------- 89 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE----------------------------EEEE-CS-----------
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE----------------------------EEEE-CC-----------
Confidence 35678999974 5566666788999999887642 1111 12
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
..+.++.| +++|+++++. .+ .|.+||..+++........ .
T Consensus 90 -~~v~~i~~--~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~--~--------------------------------- 129 (326)
T 2ghs_A 90 -FMGSALAK--ISDSKQLIAS-DD-GLFLRDTATGVLTLHAELE--S--------------------------------- 129 (326)
T ss_dssp -SCEEEEEE--EETTEEEEEE-TT-EEEEEETTTCCEEEEECSS--T---------------------------------
T ss_pred -CcceEEEE--eCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCC--C---------------------------------
Confidence 57899999 6788766654 44 4889998877654321100 0
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cC----CeEEEEEccCCCceeeeeecCCCcCcCcc
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD----LRINLWNLEISDQCFNIVDMKPSNMDDLT 267 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 267 (409)
......++.++++|+|+++++. .+ +...||.+. .+..... ....
T Consensus 130 ----------------------~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~--------~~~~ 178 (326)
T 2ghs_A 130 ----------------------DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKL--------FADI 178 (326)
T ss_dssp ----------------------TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEE--------EEEE
T ss_pred ----------------------CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEe--------eCCC
Confidence 0112357889999999877655 32 234444444 3433222 1122
Q ss_pred CceEEEEEeCCCCCEEE-EEeCCCeEEEEeCC--Cc-cccccccccccccccccCCcccccccccceeeeEeccCCCEEE
Q 015290 268 EVITSAEFHPIYCNLLA-YSSSRGFVRLVDMR--QS-ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 343 (409)
Q Consensus 268 ~~v~~~~~~p~~~~~l~-s~s~dg~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 343 (409)
.....++|+|++ +.++ +.+.++.|.+||+. ++ .... ...+.. +.........++++++|.+.+
T Consensus 179 ~~~~~i~~s~dg-~~lyv~~~~~~~I~~~d~~~~~Gl~~~~--~~~~~~----------~~~~~~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 179 SIPNSICFSPDG-TTGYFVDTKVNRLMRVPLDARTGLPTGK--AEVFID----------STGIKGGMDGSVCDAEGHIWN 245 (326)
T ss_dssp SSEEEEEECTTS-CEEEEEETTTCEEEEEEBCTTTCCBSSC--CEEEEE----------CTTSSSEEEEEEECTTSCEEE
T ss_pred cccCCeEEcCCC-CEEEEEECCCCEEEEEEcccccCCcccC--ceEEEE----------CCCCCCCCCeeEECCCCCEEE
Confidence 356789999999 7554 44567899999986 44 3211 011111 001123467899999998777
Q ss_pred Eeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEc-CCCCeEEEccc
Q 015290 344 SRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVS-GDGLHFATGSY 404 (409)
Q Consensus 344 sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-pdg~~l~s~s~ 404 (409)
+... +.|.+||.. ++.+..+..+...+ ++++|+ ||++.|+.++.
T Consensus 246 a~~~~~~v~~~d~~--g~~~~~i~~~~~~~---------------~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 246 ARWGEGAVDRYDTD--GNHIARYEVPGKQT---------------TCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEETTTEEEEECTT--CCEEEEEECSCSBE---------------EEEEEESTTSCEEEEEEB
T ss_pred EEeCCCEEEEECCC--CCEEEEEECCCCCc---------------EEEEEecCCCCEEEEEec
Confidence 6644 899999984 67777776554332 689998 89887655443
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.41 E-value=5e-11 Score=115.91 Aligned_cols=192 Identities=14% Similarity=0.031 Sum_probs=124.5
Q ss_pred cceEEEEEEecCCCCEEEEEeCCC-----eEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDK-----TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..+..++| ||||++|+.++.++ .|++||+.+++.....
T Consensus 125 ~~~~~~~~--SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~----------------------------------- 167 (710)
T 2xdw_A 125 VALRGYAF--SEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV----------------------------------- 167 (710)
T ss_dssp EEEEEEEE--CTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-----------------------------------
T ss_pred EEEEEEEE--CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-----------------------------------
Confidence 46888999 89999998775443 8999999888654321
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCe----------------EEEEEccCCCc
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLR----------------INLWNLEISDQ 251 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~----------------i~lwd~~~~~~ 251 (409)
. ....+..++|+|||+.|+.+ .++. |++|++. ++.
T Consensus 168 --------------------------~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~-t~~ 219 (710)
T 2xdw_A 168 --------------------------L-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLG-TDQ 219 (710)
T ss_dssp --------------------------E-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETT-SCG
T ss_pred --------------------------c-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECC-CCc
Confidence 0 11125678999999999887 6654 9999998 443
Q ss_pred ee--eeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC-----CCeEEEEeCCC------ccccccccccccccccccC
Q 015290 252 CF--NIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-----RGFVRLVDMRQ------SALCDHSARILRDAAESHG 318 (409)
Q Consensus 252 ~~--~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~-----dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~ 318 (409)
.. .++ ....+...+..+.|+|+| ++|+..+. +..|.+||+.+ +... ...+..
T Consensus 220 ~~~~~v~-----~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~---~~~l~~------ 284 (710)
T 2xdw_A 220 SEDILCA-----EFPDEPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQESNGITGILK---WVKLID------ 284 (710)
T ss_dssp GGCEEEE-----CCTTCTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC---CEEEEC------
T ss_pred ccceEEe-----ccCCCCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECcccccccCCccc---eEEeeC------
Confidence 21 111 123355668899999999 88777654 56899999876 3211 122222
Q ss_pred CcccccccccceeeeEeccCCCEEEEeec-----CeEEEEEccCCCc--ceEEEecccCcccccccccCCCCccceeeEE
Q 015290 319 SKSFFTEIIASISDIKFANDGQHLLSRDY-----MNLKLWDIRMDST--PVATFKIHEHLRPKLCDLYNNDSIFDKFECS 391 (409)
Q Consensus 319 ~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-----~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 391 (409)
+...+.. .|+|+|+.|+..++ ..|.+||+.. +. ....+..+.... .+..++
T Consensus 285 -------~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~-------------~~~~~~ 342 (710)
T 2xdw_A 285 -------NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTD-PEESKWKVLVPEHEKD-------------VLEWVA 342 (710)
T ss_dssp -------SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTS-CCGGGCEEEECCCSSC-------------EEEEEE
T ss_pred -------CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCC-CCcccceeccCCCCCC-------------eEEEEE
Confidence 1223333 58899987775532 4699999875 32 234444443310 014788
Q ss_pred EcCCCCeEEEcccCCC
Q 015290 392 VSGDGLHFATGSYRRD 407 (409)
Q Consensus 392 ~spdg~~l~s~s~dg~ 407 (409)
|++++.++++...|+.
T Consensus 343 ~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 343 CVRSNFLVLCYLHDVK 358 (710)
T ss_dssp EETTTEEEEEEEETTE
T ss_pred EEcCCEEEEEEEECCE
Confidence 8888888888877763
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.41 E-value=8.8e-11 Score=101.36 Aligned_cols=112 Identities=10% Similarity=-0.024 Sum_probs=77.6
Q ss_pred cccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCce---eeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeE
Q 015290 217 HDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQC---FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFV 292 (409)
Q Consensus 217 ~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i 292 (409)
+......++|+|+++.+++. .++.|.+|++...+.. ...+ ..+...+..++++++| +++++. ++.|
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-------~~~~~~p~~i~~d~~G-~l~v~~--~~~v 239 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-------TVEPGKTDGLRVDAGG-LIWASA--GDGV 239 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-------CCSSSCCCSEEEBTTS-CEEEEE--TTEE
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-------eCCCCCCCeEEECCCC-CEEEEc--CCeE
Confidence 34456789999999998666 7899999998633333 2221 1234456789999999 877666 7889
Q ss_pred EEEeCCCccccccccccccccccccCCcccccccccceeeeEe-ccCCCEEEEeecCeEEEEEccC
Q 015290 293 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKF-ANDGQHLLSRDYMNLKLWDIRM 357 (409)
Q Consensus 293 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~g~~l~sg~~~~v~iwd~~~ 357 (409)
.+||... +. ...+.. +.. +.+++| +|+++.|++++.+.+.-++..+
T Consensus 240 ~~~~~~g-~~----~~~~~~-------------~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 240 HVLTPDG-DE----LGRVLT-------------PQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNV 286 (296)
T ss_dssp EEECTTS-CE----EEEEEC-------------SSC-CCEEEEESTTSCEEEEEETTEEEEEECSC
T ss_pred EEECCCC-CE----EEEEEC-------------CCC-ceeEEEECCCCCEEEEEcCCeEEEEEccc
Confidence 9999863 32 133332 123 788999 6899988888776666666653
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.40 E-value=2.7e-10 Score=102.68 Aligned_cols=265 Identities=9% Similarity=0.033 Sum_probs=154.5
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
-.....|+|+++++++++...++.|++||..++.. ...... .
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~---------------------------~~~~~~-~---------- 171 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV---------------------------TTVHPG-F---------- 171 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEE---------------------------EEEEET-C----------
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEE---------------------------EEeecc-C----------
Confidence 34688999999999888777789999999987652 111222 1
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCC--eEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDK--TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
.... ++| +++++.|+++..++ .|.+|+..++.......
T Consensus 172 --~~~~-ia~--~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g----------------------------------- 211 (409)
T 3hrp_A 172 --KGGK-PAV--TKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIG----------------------------------- 211 (409)
T ss_dssp --CBCB-CEE--CTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEE-----------------------------------
T ss_pred --CCCc-eeE--ecCCCcEEEEecCCCceEEEEEcCCCceeEEee-----------------------------------
Confidence 2334 888 78999998888766 78888776543211100
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccC
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 268 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 268 (409)
.........+.+++++|++..|+.+ .++.|+.||.. .+.. ..+... ...++..
T Consensus 212 ----------------------~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~-~~~~-~~~~~~--~~~g~~~ 265 (409)
T 3hrp_A 212 ----------------------QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVK-TQEV-TLIKQL--ELSGSLG 265 (409)
T ss_dssp ----------------------ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETT-TCCE-EEEEEC--CCCSCCC
T ss_pred ----------------------eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECC-CCCE-EEEecc--cccCCCC
Confidence 0001133456788999955556667 88899999987 3332 221000 0111212
Q ss_pred ce-E-EEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcc--cccccccceeeeEeccCCCEEEE
Q 015290 269 VI-T-SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKS--FFTEIIASISDIKFANDGQHLLS 344 (409)
Q Consensus 269 ~v-~-~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~s~~g~~l~s 344 (409)
.- . .++|+|++..++++-..++.|+.|+..... ..+..+........ .....-.....++++|+|+++++
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~------~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC------EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE------EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE------EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 21 3 999999542777777778999999976531 12211000000000 00000134688999999997777
Q ss_pred ee-c-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 345 RD-Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 345 g~-~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
-. . +.|+.||+.. +. +..+.++..........-..........++++|+|.++++...++.|
T Consensus 340 d~~~~~~I~~~~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~I 403 (409)
T 3hrp_A 340 DGFKGYCLRKLDILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAI 403 (409)
T ss_dssp ETTTTCEEEEEETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEE
T ss_pred eCCCCCEEEEEECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeE
Confidence 66 5 9999999753 54 44554441110000000000011224699999999888877766554
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=1e-10 Score=99.35 Aligned_cols=195 Identities=7% Similarity=0.017 Sum_probs=133.6
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeec-CCCccccccccce
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQ-SHEPEFDYLKSLE 111 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~ 111 (409)
..+.+++++++|+++++.. ++.|.+||..+... ..+. ...
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~----------------------------~~~~~~~~---------- 107 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ----------------------------TVLPFDGL---------- 107 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC----------------------------EECCCCSC----------
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE----------------------------eeeecCCc----------
Confidence 4678899999999666655 88999999876542 1111 111
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
..+.++++ +++|.++++...++.|.+|+..+.......
T Consensus 108 --~~p~~i~~--~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-------------------------------------- 145 (270)
T 1rwi_B 108 --NYPEGLAV--DTQGAVYVADRGNNRVVKLAAGSKTQTVLP-------------------------------------- 145 (270)
T ss_dssp --SSEEEEEE--CTTCCEEEEEGGGTEEEEECTTCCSCEECC--------------------------------------
T ss_pred --CCCcceEE--CCCCCEEEEECCCCEEEEEECCCceeEeec--------------------------------------
Confidence 46889999 788987777777888988865433211100
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
......+..++++++++.+++. .++.|.+||.. ....... ...+...+
T Consensus 146 -----------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-~~~~~~~-------~~~~~~~p 194 (270)
T 1rwi_B 146 -----------------------FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE-SNNQVVL-------PFTDITAP 194 (270)
T ss_dssp -----------------------CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT-TCCEEEC-------CCSSCCSE
T ss_pred -----------------------cccCCCceeEEEeCCCCEEEEECCCCEEEEEecC-CCceEee-------cccCCCCc
Confidence 1122345789999999877777 78899999987 3332221 12223568
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-Ce
Q 015290 271 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MN 349 (409)
Q Consensus 271 ~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~ 349 (409)
..++++++| .++++...++.|.+||...... ..... .+...+.+++++++|+++++... +.
T Consensus 195 ~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~-----~~~~~------------~~~~~p~~i~~~~~g~l~v~~~~~~~ 256 (270)
T 1rwi_B 195 WGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS-----TVLPF------------TGLNTPLAVAVDSDRTVYVADRGNDR 256 (270)
T ss_dssp EEEEECTTC-CEEEEETTTSCEEEECTTCSCC-----EECCC------------CSCSCEEEEEECTTCCEEEEEGGGTE
T ss_pred eEEEECCCC-CEEEEECCCCcEEEEcCCCCcc-----eeecc------------CCCCCceeEEECCCCCEEEEECCCCE
Confidence 899999999 8888888888999999866432 11111 01235789999999987777654 99
Q ss_pred EEEEEccC
Q 015290 350 LKLWDIRM 357 (409)
Q Consensus 350 v~iwd~~~ 357 (409)
|+++++..
T Consensus 257 v~~~~~~~ 264 (270)
T 1rwi_B 257 VVKLTSLE 264 (270)
T ss_dssp EEEECCCG
T ss_pred EEEEcCCC
Confidence 99999874
No 201
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=5e-10 Score=98.75 Aligned_cols=257 Identities=8% Similarity=-0.001 Sum_probs=144.9
Q ss_pred CcEEEEEECCCCCEEEEEe--cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 33 DIVSAIEFDKTGDYLAVGD--RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
..+..|+++|+|+++++.. .++.++||.+.+++.. . .|... ....+|-
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~--------~-----------~p~~~--~~~~~~~--------- 66 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI--------P-----------FPPQS--GNAIITF--------- 66 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE--------E-----------SCCCC--SSCCCCC---------
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee--------c-----------CCCcc--cCcccce---------
Confidence 5789999999999988864 2343666666533210 0 00000 0011222
Q ss_pred eeccceEEEEEEecCCCCEEEEEeC-----CCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCcee
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTN-----DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
..+.+|++ +++++++++-.. ++.|.+||+.+++...........
T Consensus 67 ---~~p~gv~~--d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~-------------------------- 115 (343)
T 2qe8_A 67 ---DTVLGIKS--DGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI-------------------------- 115 (343)
T ss_dssp ---SCEEEEEE--CSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT--------------------------
T ss_pred ---eEeeEEEE--cCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh--------------------------
Confidence 57999999 788865555433 578999999888754433211000
Q ss_pred ecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-c----CCeEEEEEccCCCceeeeeecCC
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D----DLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~----d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
..+...+..+++++++..++.+ . ++.|.+||+. .+.....+....
T Consensus 116 -----------------------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~-~g~~~r~~~~~~ 165 (343)
T 2qe8_A 116 -----------------------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ-TGLAARVLQGYP 165 (343)
T ss_dssp -----------------------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT-TCCEEEECTTCT
T ss_pred -----------------------------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC-CCCEEEEecCCC
Confidence 1123345788888765555444 3 6789999987 555444431100
Q ss_pred C--------cCcC--------------ccCceEEEEEeCCCCCEEEEEeCCC-eEEEEeCC---Cccccccccccccccc
Q 015290 261 S--------NMDD--------------LTEVITSAEFHPIYCNLLAYSSSRG-FVRLVDMR---QSALCDHSARILRDAA 314 (409)
Q Consensus 261 ~--------~~~~--------------~~~~v~~~~~~p~~~~~l~s~s~dg-~i~iwd~~---~~~~~~~~~~~~~~~~ 314 (409)
. ...+ ....+..++|+|++ +.|+.+..++ .+..++.. .+.... ......
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg-~~ly~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~-- 240 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN-EWLYLSPMHSTSMYRIKSADLSNLQLTD--AELGSK-- 240 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS-CEEEEEESSCSEEEEEEHHHHTCTTCCH--HHHHTT--
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEeccCC-CEEEEEeCCCCeEEEEEHHHhcCCCCCh--hhhhcc--
Confidence 0 0000 01246889999999 8888777665 44444421 110000 000000
Q ss_pred cccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEc
Q 015290 315 ESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVS 393 (409)
Q Consensus 315 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 393 (409)
. ...++......++++++|.++++... +.|.+||... ++........... .+.+++|.
T Consensus 241 -----~-~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~-G~~~~~~~~~~~~--------------~p~~va~~ 299 (343)
T 2qe8_A 241 -----I-ERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSAD-RAYKLLVTDEKLS--------------WTDSFNFG 299 (343)
T ss_dssp -----C-EEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTT-TEEEEEEECGGGS--------------CEEEEEEC
T ss_pred -----e-EecccCCCCceEEECCCCCEEEEccCCCeEEEEECCC-CCEEEEEECCcee--------------cCCeeEEC
Confidence 0 00112335678999999988887765 9999999833 5533222211111 12589999
Q ss_pred CCCCeEEEcccCC
Q 015290 394 GDGLHFATGSYRR 406 (409)
Q Consensus 394 pdg~~l~s~s~dg 406 (409)
++|+++++.+..+
T Consensus 300 ~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 300 SDGYLYFDCNQLH 312 (343)
T ss_dssp TTSCEEEEECCGG
T ss_pred CCCcEEEEeCccc
Confidence 9998887766443
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=1.9e-11 Score=107.83 Aligned_cols=189 Identities=8% Similarity=0.047 Sum_probs=123.0
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 193 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (409)
..++.+++ ++...++++|+.++ +++|++...+...... .. +
T Consensus 38 ~~~nlLai--s~~~gll~a~~~~~-l~v~~~~~l~~~~~~~---~~---------------------------------~ 78 (388)
T 1xip_A 38 ASLQNLDI--SNSKSLFVAASGSK-AVVGELQLLRDHITSD---ST---------------------------------P 78 (388)
T ss_dssp SCCBCEEE--ETTTTEEEEEETTE-EEEEEHHHHHHHHHSS---SC---------------------------------C
T ss_pred ccccEEEE--cCCCCEEEEeCCCE-EEEEEhhHhhhhhccc---cc---------------------------------c
Confidence 46889999 68888999999985 6669876443100000 00 0
Q ss_pred ceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEE
Q 015290 194 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSA 273 (409)
Q Consensus 194 ~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 273 (409)
.++... ..+.. |+.|+| ++.+|+++.++.|++||++... .... ...|...+.++
T Consensus 79 -------------~~~~~~--~~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~sl~-~~~~-------~~~~~~~v~~i 132 (388)
T 1xip_A 79 -------------LTFKWE--KEIPD-VIFVCF--HGDQVLVSTRNALYSLDLEELS-EFRT-------VTSFEKPVFQL 132 (388)
T ss_dssp -------------CCCSEE--EECTT-EEEEEE--ETTEEEEEESSEEEEEESSSTT-CEEE-------EEECSSCEEEE
T ss_pred -------------ccceEE--eeCCC-eeEEEE--CCCEEEEEcCCcEEEEEchhhh-ccCc-------cceeecceeeE
Confidence 011111 23455 999999 8999999977999999998333 2222 23455667777
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe-ecCeEEE
Q 015290 274 EFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DYMNLKL 352 (409)
Q Consensus 274 ~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg-~~~~v~i 352 (409)
.+.+. .+++++.||.|.+||+.++... . . ...|++++|||+| ++.| .+|.+++
T Consensus 133 ~~~~p---~~av~~~dG~L~v~dl~~~~~~----~---~--------------~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 133 KNVNN---TLVILNSVNDLSALDLRTKSTK----Q---L--------------AQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp EECSS---EEEEEETTSEEEEEETTTCCEE----E---E--------------EESEEEEEECSSE--EEEEETTSCEEE
T ss_pred EecCC---CEEEEECCCCEEEEEccCCccc----c---c--------------cCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 76653 3888899999999999876531 1 1 3479999999999 4445 4699999
Q ss_pred EEccCCCcc--eEEEecccCccccccccc-CCCCccceeeEEEcCCCCeEEE
Q 015290 353 WDIRMDSTP--VATFKIHEHLRPKLCDLY-NNDSIFDKFECSVSGDGLHFAT 401 (409)
Q Consensus 353 wd~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~spdg~~l~s 401 (409)
|+... +.. ..++..... +. +.+.-+.|.++.|.+++.+|++
T Consensus 187 ~~~~~-~~~~~k~~I~~Pp~-------~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRN-GEMEKQFEFSLPSE-------LEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEET-TEEEEEEEECCCHH-------HHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCC-ccccccceecCCcc-------cccccCCCeeEEEEEEecCCeEEEE
Confidence 98874 343 445522110 00 0001133479999999998886
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.37 E-value=6e-11 Score=115.03 Aligned_cols=189 Identities=9% Similarity=0.014 Sum_probs=117.2
Q ss_pred cceEEEEEEecCCCCEEEEE-----eCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 114 EKINRVRWCAAPNGSMFILS-----TNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..+.+++| ||||++|+.+ +.+.+|++||+.+++......
T Consensus 121 ~~~~~~~~--SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~---------------------------------- 164 (695)
T 2bkl_A 121 VSLGTWAV--SWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV---------------------------------- 164 (695)
T ss_dssp EEEEEEEE--CTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC----------------------------------
T ss_pred EEEEEEEE--CCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc----------------------------------
Confidence 57889999 8999999843 334689999998876431000
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCe-------------EEEEEccCCCce--
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLR-------------INLWNLEISDQC-- 252 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~-------------i~lwd~~~~~~~-- 252 (409)
+... ....++|+|||+.|+.+ .+.. |++|++. ++..
T Consensus 165 -------------------------~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~-t~~~~~ 216 (695)
T 2bkl_A 165 -------------------------IEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLG-TEPSKD 216 (695)
T ss_dssp -------------------------BSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETT-SCGGGC
T ss_pred -------------------------cCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECC-CCchhc
Confidence 0111 11468999999999987 7665 9999998 4431
Q ss_pred eeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCC----eEEEEeCCCccccccccccccccccccCCccccccccc
Q 015290 253 FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG----FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
..++ ....+...+.++.|+|+| ++|+..+.++ .|.+||..+++. ..+.. +..
T Consensus 217 ~lv~-----~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~l~~-------------~~~ 272 (695)
T 2bkl_A 217 TVVH-----ERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEKDF-----RLLVK-------------GVG 272 (695)
T ss_dssp EEEE-----CCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCSSC-----EEEEE-------------CSS
T ss_pred eEEE-----ecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCCce-----EEeec-------------CCC
Confidence 1121 134455678999999999 8777776555 677776544432 22222 123
Q ss_pred ceeeeEeccCCCEEEEee----cCeEEEEEccCCCcc--eEEEeccc-CcccccccccCCCCccceeeEEEcCCCCeEEE
Q 015290 329 SISDIKFANDGQHLLSRD----YMNLKLWDIRMDSTP--VATFKIHE-HLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT 401 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~sg~----~~~v~iwd~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 401 (409)
.+....+ ++|.+++... ++.|.+||+.. +.. ...+..+. ... +..++|+ ++.++++
T Consensus 273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~--------------l~~~~~~-~~~lv~~ 335 (695)
T 2bkl_A 273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAK-PARASWKEIVPEDSSAS--------------LLSVSIV-GGHLSLE 335 (695)
T ss_dssp CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTB-CSGGGCEEEECCCSSCE--------------EEEEEEE-TTEEEEE
T ss_pred ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCC-CCccCCeEEecCCCCCe--------------EEEEEEE-CCEEEEE
Confidence 3445555 6666444443 27899999875 332 23333332 211 1467777 6777778
Q ss_pred cccCCC
Q 015290 402 GSYRRD 407 (409)
Q Consensus 402 ~s~dg~ 407 (409)
...|+.
T Consensus 336 ~~~dg~ 341 (695)
T 2bkl_A 336 YLKDAT 341 (695)
T ss_dssp EEETTE
T ss_pred EEECCE
Confidence 777764
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.35 E-value=2e-11 Score=107.78 Aligned_cols=189 Identities=11% Similarity=0.081 Sum_probs=124.3
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
..++.+++++...++++|+.++ +++|+.+.... .+ ..-..++......++
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~---------~~--------------------~~~~~~~~~~~~~~l 87 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRD---------HI--------------------TSDSTPLTFKWEKEI 87 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHH---------HH--------------------HSSSCCCCCSEEEEC
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhh---------hh--------------------ccccccccceEEeeC
Confidence 4799999999999999999875 66799764331 00 000000111112223
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
.. |+.|+| ++..|+++ .++.|++||+.+.......
T Consensus 88 p~-V~~l~f----d~~~L~v~-~~~~l~v~dv~sl~~~~~~--------------------------------------- 122 (388)
T 1xip_A 88 PD-VIFVCF----HGDQVLVS-TRNALYSLDLEELSEFRTV--------------------------------------- 122 (388)
T ss_dssp TT-EEEEEE----ETTEEEEE-ESSEEEEEESSSTTCEEEE---------------------------------------
T ss_pred CC-eeEEEE----CCCEEEEE-cCCcEEEEEchhhhccCcc---------------------------------------
Confidence 36 999999 77899888 8899999999765422110
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceE
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 271 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 271 (409)
..+...+.++.+.+. .++++ .||.+.+||+. .+.... +...|+
T Consensus 123 ----------------------~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~-~~~~~~-----------~~~~Vs 166 (388)
T 1xip_A 123 ----------------------TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLR-TKSTKQ-----------LAQNVT 166 (388)
T ss_dssp ----------------------EECSSCEEEEEECSS--EEEEEETTSEEEEEETT-TCCEEE-----------EEESEE
T ss_pred ----------------------ceeecceeeEEecCC--CEEEEECCCCEEEEEcc-CCcccc-----------ccCCce
Confidence 123344566666543 27777 99999999998 444332 335799
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCccccc---ccccceeeeEeccCCCEEEE
Q 015290 272 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFT---EIIASISDIKFANDGQHLLS 344 (409)
Q Consensus 272 ~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~s~~g~~l~s 344 (409)
+++|+|+| ++.|..||.+++|+...+.... .+.+.. + ..+. +|...|.++.|.++++++++
T Consensus 167 ~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~--k~~I~~------P-p~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 167 SFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEK--QFEFSL------P-SELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEECSSE---EEEEETTSCEEEEEEETTEEEE--EEEECC------C-HHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCc---eEEEEcCCcEEEEcCCCccccc--cceecC------C-cccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999998 5778899999999887654200 011211 0 0011 24678999999999999986
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.34 E-value=1.3e-10 Score=112.57 Aligned_cols=145 Identities=10% Similarity=-0.006 Sum_probs=83.5
Q ss_pred cccceeEEEeCCCCCeEEEe-c----CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC--
Q 015290 217 HDFNINSISNNSDCETFVSA-D----DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-- 289 (409)
Q Consensus 217 ~~~~v~~l~~~~~~~~l~~~-~----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-- 289 (409)
+...+..+.|+|||++|+.. . .+.|+++|+......... +..+....... ++++|..+++....+
T Consensus 232 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~-------l~~~~~~~~~~-~~~~g~~l~~~t~~~~~ 303 (693)
T 3iuj_A 232 QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT-------VQGDLDADVSL-VDNKGSTLYLLTNRDAP 303 (693)
T ss_dssp GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE-------EECSSSSCEEE-EEEETTEEEEEECTTCT
T ss_pred CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE-------EeCCCCceEEE-EeccCCEEEEEECCCCC
Confidence 34456789999999988753 2 358999998733223333 23344444444 666663455555443
Q ss_pred -CeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee--c--CeEEEEEccCCCcceEE
Q 015290 290 -GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--Y--MNLKLWDIRMDSTPVAT 364 (409)
Q Consensus 290 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~--~--~~v~iwd~~~~~~~~~~ 364 (409)
+.|..+|+.++... ..+.+.. |...+. .|++++++|+... + ..|++||+. +.....
T Consensus 304 ~~~l~~~d~~~~~~~--~~~~l~~-------------~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~--g~~~~~ 364 (693)
T 3iuj_A 304 NRRLVTVDAANPGPA--HWRDLIP-------------ERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE--GKRVRE 364 (693)
T ss_dssp TCEEEEEETTSCCGG--GCEEEEC-------------CCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT--SCEEEE
T ss_pred CCEEEEEeCCCCCcc--ccEEEec-------------CCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC--CCeeEE
Confidence 57889998875420 0011111 223333 8999999887653 3 378999986 444444
Q ss_pred EecccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 365 FKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
+....... +..+.++|++..|+..
T Consensus 365 l~~p~~~~--------------~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 365 VALPGLGS--------------VSGFNGKHDDPALYFG 388 (693)
T ss_dssp ECCSSSSE--------------EEECCCCTTCSCEEEE
T ss_pred eecCCCce--------------EEeeecCCCCCEEEEE
Confidence 43222110 1356667777765543
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.33 E-value=8.5e-09 Score=91.61 Aligned_cols=286 Identities=8% Similarity=-0.001 Sum_probs=161.9
Q ss_pred EECCCCCEEEEEec--CC---eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceec
Q 015290 39 EFDKTGDYLAVGDR--GG---RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIE 113 (409)
Q Consensus 39 ~~~~~~~~la~~~~--dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 113 (409)
...|+++++.+... .. .|.+||..+++. +..+....
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~---------------------------~~~i~~g~------------ 67 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSI---------------------------LGHVNGGF------------ 67 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeE---------------------------EEEecCCC------------
Confidence 44578887777653 22 889999987663 33333222
Q ss_pred cceEEEEEEecCCCCEEEEEe----------CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCc
Q 015290 114 EKINRVRWCAAPNGSMFILST----------NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA 183 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (409)
.+ .+.+ +|||+.++.+. .++.|.+||..+.+............ +. ..........++++.
T Consensus 68 ~p--~i~~--spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~-----~~-~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 68 LP--NPVA--AHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR-----FD-VGPYSWMNANTPNNA 137 (373)
T ss_pred CC--CeEE--CCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc-----cc-cCCCccceEECCCCC
Confidence 23 7889 89999998885 36789999998776655433210000 00 001122445567777
Q ss_pred eeecccccccceeEEEecCCcccceeeee-eccccccceeEEEeCCCCCe-EEEe-cCCeEEEEEccCCCceeeeeecCC
Q 015290 184 HGYHLEWTENMATKIANVGNSVHARCQKV-YPHAHDFNINSISNNSDCET-FVSA-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 184 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~-l~~~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
+++......++.|.++| .+. +.+.. + .. . .++.+.|+++. +++. .||.+.++|. . +..........
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~---~~~~~~i-~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~-g~~~~~~~~~~ 206 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGG---SSDDQLL-SS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-A-GGAAGAGLVGA 206 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCC---CEEeEEc-CC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC-C-CcEEEEEeccc
Confidence 77776654457888888 763 33333 2 11 1 12455566543 3444 8999999999 3 33332221110
Q ss_pred CcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC
Q 015290 261 SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 340 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 340 (409)
. +.+.........+.+++ ..++..+.++.+.+.|+....... ...+....... ....+ .......++++||++
T Consensus 207 ~-~~~~~p~~~~~~~~~~~-~~~~~~~~~~~v~vid~~~~~~~v--~~~~~~~~~~~-~~~~~--~p~g~~~~~~s~d~~ 279 (373)
T 2mad_H 207 M-LTAAQNLLTQPAQANKS-GRIVWPVYSGKILQADISAAGATN--KAPIDALSGGR-KADTW--RPGGWQQVAYLKSSD 279 (373)
T ss_pred c-ccCCcceeecceeEecC-CEEEEEcCCceEEEEeccCCcceE--eeeeeecCCcc-cccce--ecCceEeEEECCCCC
Confidence 0 11111112335667776 444444477899999987643210 11111100000 00000 012244578999998
Q ss_pred EEEEeec-----------CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC-eEEEccc-CCC
Q 015290 341 HLLSRDY-----------MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGSY-RRD 407 (409)
Q Consensus 341 ~l~sg~~-----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~s~s~-dg~ 407 (409)
.|..+.+ +.|.++|..+ .+.+..+...... ..++|+|||+ +|+++.. ++.
T Consensus 280 ~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~g~~p----------------~~i~~s~Dg~~~l~v~~~~~~~ 342 (373)
T 2mad_H 280 GIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISLGHDV----------------DAISVAQDGGPDLYALSAGTEV 342 (373)
T ss_pred EEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEECCCCc----------------CeEEECCCCCeEEEEEcCCCCe
Confidence 7776431 5799999986 7888888655443 4899999999 6777663 554
Q ss_pred C
Q 015290 408 N 408 (409)
Q Consensus 408 i 408 (409)
|
T Consensus 343 V 343 (373)
T 2mad_H 343 L 343 (373)
T ss_pred E
Confidence 3
No 207
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=3.1e-10 Score=96.58 Aligned_cols=182 Identities=9% Similarity=0.032 Sum_probs=126.7
Q ss_pred CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecCCcc
Q 015290 126 NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSV 205 (409)
Q Consensus 126 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 205 (409)
.++.|++++.|+.|.+||..+++......
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~--------------------------------------------------- 32 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYP--------------------------------------------------- 32 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEE---------------------------------------------------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeC---------------------------------------------------
Confidence 45689999999999999998887765432
Q ss_pred cceeeeeeccccc-cceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEE
Q 015290 206 HARCQKVYPHAHD-FNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA 284 (409)
Q Consensus 206 ~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 284 (409)
.+. ..+.++++.|+|++++ +.++.|..||.. ++.+..+.. +....+.++.+.|+| ++++
T Consensus 33 ----------~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~--G~~~W~~~~------~~~~~~~~~~~~~dG-~~lv 92 (276)
T 3no2_A 33 ----------LEKGWECNSVAATKAGEILF-SYSKGAKMITRD--GRELWNIAA------PAGCEMQTARILPDG-NALV 92 (276)
T ss_dssp ----------CCTTCCCCEEEECTTSCEEE-ECBSEEEEECTT--SCEEEEEEC------CTTCEEEEEEECTTS-CEEE
T ss_pred ----------CCccCCCcCeEECCCCCEEE-eCCCCEEEECCC--CCEEEEEcC------CCCccccccEECCCC-CEEE
Confidence 122 3467889999999888 546679999984 555555321 123467899999999 9998
Q ss_pred EEeC-CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcce
Q 015290 285 YSSS-RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPV 362 (409)
Q Consensus 285 s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~ 362 (409)
+.+. ++.+..+|. +++.. ..+.. ... ...+......+++.++|+++++... +.|..||.. ++.+
T Consensus 93 ~~~~~~~~v~~vd~-~Gk~l----~~~~~-~~~------~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~--G~~~ 158 (276)
T 3no2_A 93 AWCGHPSTILEVNM-KGEVL----SKTEF-ETG------IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN--GQLL 158 (276)
T ss_dssp EEESTTEEEEEECT-TSCEE----EEEEE-CCS------CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT--SCEE
T ss_pred EecCCCCEEEEEeC-CCCEE----EEEec-cCC------CCcccccccCceECCCCCEEEEecCCCEEEEECCC--CCEE
Confidence 8877 778888886 44431 22221 000 0111124556788999999998875 999999985 8888
Q ss_pred EEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 363 ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
..+.....+ .++...++|.++++++.++.|
T Consensus 159 w~~~~~~~~----------------~~~~~~~~g~~~v~~~~~~~v 188 (276)
T 3no2_A 159 NSVKLSGTP----------------FSSAFLDNGDCLVACGDAHCF 188 (276)
T ss_dssp EEEECSSCC----------------CEEEECTTSCEEEECBTTSEE
T ss_pred EEEECCCCc----------------cceeEcCCCCEEEEeCCCCeE
Confidence 888765433 367778888888877766543
No 208
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.32 E-value=4.7e-10 Score=98.24 Aligned_cols=187 Identities=14% Similarity=0.001 Sum_probs=121.9
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 193 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (409)
.....+.+ .+++.+++...++.|.+||..+++......
T Consensus 44 ~~~~~i~~---~~~~lyv~~~~~~~v~viD~~t~~~~~~i~--------------------------------------- 81 (328)
T 3dsm_A 44 DVAQSMVI---RDGIGWIVVNNSHVIFAIDINTFKEVGRIT--------------------------------------- 81 (328)
T ss_dssp SCEEEEEE---ETTEEEEEEGGGTEEEEEETTTCCEEEEEE---------------------------------------
T ss_pred ccceEEEE---ECCEEEEEEcCCCEEEEEECcccEEEEEcC---------------------------------------
Confidence 34667777 345566666778999999999886644321
Q ss_pred ceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEE
Q 015290 194 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS 272 (409)
Q Consensus 194 ~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 272 (409)
.......++++++++.+++. .++.|.+||.. +.+....+.... ..+.......
T Consensus 82 -----------------------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~-t~~~~~~i~~g~--~~~~~~~p~~ 135 (328)
T 3dsm_A 82 -----------------------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPK-TYEITGYIECPD--MDMESGSTEQ 135 (328)
T ss_dssp -----------------------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETT-TTEEEEEEECTT--CCTTTCBCCC
T ss_pred -----------------------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECC-CCeEEEEEEcCC--ccccCCCcce
Confidence 12346788998888655666 79999999998 666655543221 0111124456
Q ss_pred EEEeCCCCCEEEEEe-CCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c---
Q 015290 273 AEFHPIYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y--- 347 (409)
Q Consensus 273 ~~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~--- 347 (409)
+++ .++ .++++.. .++.|.++|..+++.. ..+.. ......++++|+|+++++.. +
T Consensus 136 i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~~----~~i~~--------------g~~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 136 MVQ-YGK-YVYVNCWSYQNRILKIDTETDKVV----DELTI--------------GIQPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp EEE-ETT-EEEEEECTTCCEEEEEETTTTEEE----EEEEC--------------SSCBCCCEECTTSEEEEEBCCBCTT
T ss_pred EEE-ECC-EEEEEcCCCCCEEEEEECCCCeEE----EEEEc--------------CCCccceEEcCCCCEEEEECCCccC
Confidence 677 344 5555544 4889999999987642 22222 12356789999999777663 3
Q ss_pred -------CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 348 -------MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 348 -------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
+.|.++|..+ ++....+.......+ ..++|+||+++|..+.
T Consensus 196 ~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p--------------~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWP--------------SEVQLNGTRDTLYWIN 243 (328)
T ss_dssp CSSCBCCCEEEEEETTT-TEEEEEEECCTTCCC--------------EEEEECTTSCEEEEES
T ss_pred CccccCCceEEEEECCC-CeEEEEEecCCCCCc--------------eeEEEecCCCEEEEEc
Confidence 6899999875 666666653221111 5899999999887654
No 209
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.32 E-value=9.9e-09 Score=88.29 Aligned_cols=239 Identities=8% Similarity=-0.009 Sum_probs=147.2
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...+.+++++++|.++++...++.|..|+... +. +.+ .+....
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~-------------------------~~~-~~~~~~---------- 98 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKG-II-------------------------KEY-TLPNPD---------- 98 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-CE-------------------------EEE-ECSSTT----------
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCC-cE-------------------------EEE-eCCCcC----------
Confidence 46789999999999888777688899998752 21 001 111122
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
..+.++++ ++++.++++...++.|..||. +++......... ..........+++.+.....
T Consensus 99 --~~~~~i~~--~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~------------~~~~~~i~~~~~g~l~v~~~-- 159 (299)
T 2z2n_A 99 --SAPYGITE--GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK------------GSYPSFITLGSDNALWFTEN-- 159 (299)
T ss_dssp --CCEEEEEE--CTTSCEEEEETTTTEEEEECT-TCCEEEEECSST------------TCCEEEEEECTTSCEEEEET--
T ss_pred --CCceeeEE--CCCCCEEEEecCCceEEEECC-CCCEEEecCCCC------------CCCCceEEEcCCCCEEEEeC--
Confidence 57889999 688888777777889999998 554433211000 01111122222222222211
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
.++.+..++. + ++............+..++++++++.+++. .++.|..||.. +.... +. ...+...+
T Consensus 160 ~~~~i~~~~~-~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~-~~-----~~~~~~~~ 227 (299)
T 2z2n_A 160 QNNAIGRITE-S---GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTS--GEITE-FK-----IPTPNARP 227 (299)
T ss_dssp TTTEEEEECT-T---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT--CCEEE-EE-----CSSTTCCE
T ss_pred CCCEEEEEcC-C---CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCC--CcEEE-EE-----CCCCCCCc
Confidence 1456777776 2 122221113344567899999999877777 78899999983 33222 11 23345678
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeE
Q 015290 271 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNL 350 (409)
Q Consensus 271 ~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v 350 (409)
.+++++++| +++++...++.|..||. ++.. ..+.. ..+...+.++++ ++|++.++...+.|
T Consensus 228 ~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~-----~~~~~-----------~~~~~~~~~i~~-~~g~l~v~~~~~~l 288 (299)
T 2z2n_A 228 HAITAGAGI-DLWFTEWGANKIGRLTS-NNII-----EEYPI-----------QIKSAEPHGICF-DGETIWFAMECDKI 288 (299)
T ss_dssp EEEEECSTT-CEEEEETTTTEEEEEET-TTEE-----EEEEC-----------SSSSCCEEEEEE-CSSCEEEEETTTEE
T ss_pred eeEEECCCC-CEEEeccCCceEEEECC-CCce-----EEEeC-----------CCCCCccceEEe-cCCCEEEEecCCcE
Confidence 999999999 87777667889999998 3332 22211 011246788999 88887776655777
Q ss_pred EEEEccC
Q 015290 351 KLWDIRM 357 (409)
Q Consensus 351 ~iwd~~~ 357 (409)
..++.++
T Consensus 289 ~~~~~~~ 295 (299)
T 2z2n_A 289 GKLTLIK 295 (299)
T ss_dssp EEEEEC-
T ss_pred EEEEcCc
Confidence 7788763
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.31 E-value=4.7e-09 Score=93.31 Aligned_cols=254 Identities=10% Similarity=-0.007 Sum_probs=143.1
Q ss_pred EEEECCCCCEEEEEe----------cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCC-Ccccc
Q 015290 37 AIEFDKTGDYLAVGD----------RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSH-EPEFD 105 (409)
Q Consensus 37 ~v~~~~~~~~la~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~~~ 105 (409)
.++|+|||++++++. .++.|.+||..+.+. +..+.-. ..+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~---------------------------~~~i~~~~~~~-- 120 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP---------------------------IADIELPDAPR-- 120 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE---------------------------EEEEECCCccc--
Confidence 899999999998885 367899999987653 1211110 000
Q ss_pred ccccceeccceEEEEEEecCCCCEEEEEeC--CCeEEEEEcCCceeeee-eccCCCcccccccccccccCceeccCCCCC
Q 015290 106 YLKSLEIEEKINRVRWCAAPNGSMFILSTN--DKTIKLWKVRDQKVKKI-KEMDHFPFVSSENTLLAEKNFMNEHNPPSF 182 (409)
Q Consensus 106 ~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (409)
.........+.| +|||++|+++.. ++.|.++| .+++.... ..... + ......+..
T Consensus 121 ----~~~g~~p~~~~~--spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-----~----------~~~~~~~~~ 178 (373)
T 2mad_H 121 ----FDVGPYSWMNAN--TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-----C----------YHIHPGAPS 178 (373)
T ss_pred ----cccCCCccceEE--CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-----e----------EEEEeCCCc
Confidence 000023457888 899999998864 57899999 88876544 32110 0 000001111
Q ss_pred ceeecccccccceeEEEecCCcccceeee--eeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCC-ceeeeeec
Q 015290 183 AHGYHLEWTENMATKIANVGNSVHARCQK--VYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISD-QCFNIVDM 258 (409)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~-~~~~~~~~ 258 (409)
.+. ....++.+.+++. +........ ..+.+.........+.+++..++.. ..+.+.+.|+.... .....+++
T Consensus 179 ~~~---~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 179 TFY---LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred eEE---EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeee
Confidence 111 1223677777777 422221111 0001111111234556665555444 77889999986221 12222211
Q ss_pred CCCc---CcCccCceEEEEEeCCCCCEEEEEeC----------CCeEEEEeCCCccccccccccccccccccCCcccccc
Q 015290 259 KPSN---MDDLTEVITSAEFHPIYCNLLAYSSS----------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTE 325 (409)
Q Consensus 259 ~~~~---~~~~~~~v~~~~~~p~~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (409)
.... ..........+.++|++ +.++.+.. .+.|.++|..+++. +..+..
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~-~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v----v~~i~~------------- 316 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSS-DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT----SSQISL------------- 316 (373)
T ss_pred cCCcccccceecCceEeEEECCCC-CEEEEEeccCCcccccCCCCeEEEEECCCCEE----EEEEEC-------------
Confidence 1100 00012334457899998 65555432 35799999988764 233333
Q ss_pred cccceeeeEeccCCC-EEEEee--cCeEEEEEccCCCcceEEE
Q 015290 326 IIASISDIKFANDGQ-HLLSRD--YMNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 326 ~~~~i~~~~~s~~g~-~l~sg~--~~~v~iwd~~~~~~~~~~~ 365 (409)
......++|+|||+ +++++. ++.|.+||..+ ++.+..+
T Consensus 317 -g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t-~~vv~~i 357 (373)
T 2mad_H 317 -GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA-GDQDQST 357 (373)
T ss_pred -CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC-CCEEeee
Confidence 23578999999999 677765 49999999986 7777763
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.26 E-value=7.1e-10 Score=108.28 Aligned_cols=190 Identities=12% Similarity=0.060 Sum_probs=114.2
Q ss_pred cceEEEEEEecCCCCEEEEEeCC-----CeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 114 EKINRVRWCAAPNGSMFILSTND-----KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..+..++| ||||++|+.++.+ ..|++||+.+++.....
T Consensus 163 ~~~~~~~~--SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~----------------------------------- 205 (741)
T 1yr2_A 163 TALDAWAA--SDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE----------------------------------- 205 (741)
T ss_dssp EEEEEEEE--CTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-----------------------------------
T ss_pred EEEEeEEE--CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-----------------------------------
Confidence 36888999 8999999887543 46999999887653210
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCC--------------eEEEEEccCCCce-
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDL--------------RINLWNLEISDQC- 252 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~--------------~i~lwd~~~~~~~- 252 (409)
.+...+..++|+|| +.|+.+ .++ .|++|++. ++..
T Consensus 206 ---------------------------~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lg-t~~~~ 256 (741)
T 1yr2_A 206 ---------------------------LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLG-TPQSA 256 (741)
T ss_dssp ---------------------------EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETT-SCGGG
T ss_pred ---------------------------CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECC-CCchh
Confidence 01111346789999 888876 544 38899987 3331
Q ss_pred -eeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC-----CeEEEEeCCCccccccccccccccccccCCccccccc
Q 015290 253 -FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-----GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI 326 (409)
Q Consensus 253 -~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (409)
..++ ....+...+..+.|+|+| ++|+..+.+ ..|.+||+.++... ....+.. +
T Consensus 257 ~~lv~-----~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~~~~~--~~~~l~~-------------~ 315 (741)
T 1yr2_A 257 DQPVF-----ATPELPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTNGKIG--PVTALIP-------------D 315 (741)
T ss_dssp CEEEE-----CCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEETTEEC--CCEEEEC-------------S
T ss_pred CEEEe-----ccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCCCCCc--ccEEecC-------------C
Confidence 1121 023344468899999999 888777654 38999998765210 0022221 0
Q ss_pred ccceeeeEeccCCCEEEEeec-----CeEEEEEccCC-CcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEE
Q 015290 327 IASISDIKFANDGQHLLSRDY-----MNLKLWDIRMD-STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA 400 (409)
Q Consensus 327 ~~~i~~~~~s~~g~~l~sg~~-----~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 400 (409)
....... ++|+|+.|+..++ +.|.+||+... ++....+..+...+ ..++|+ ++.+++
T Consensus 316 ~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l---------------~~~~~~-~~~lv~ 378 (741)
T 1yr2_A 316 LKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNL---------------ESVGIA-GNRLFA 378 (741)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEE---------------EEEEEE-BTEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeE---------------EEEEEE-CCEEEE
Confidence 1223333 3488988876542 56999998742 12333333333221 356666 556666
Q ss_pred EcccCCC
Q 015290 401 TGSYRRD 407 (409)
Q Consensus 401 s~s~dg~ 407 (409)
+...|+.
T Consensus 379 ~~~~dg~ 385 (741)
T 1yr2_A 379 SYIHDAK 385 (741)
T ss_dssp EEEETTE
T ss_pred EEEECCE
Confidence 7666653
No 212
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.25 E-value=6.9e-09 Score=91.90 Aligned_cols=171 Identities=12% Similarity=0.099 Sum_probs=97.1
Q ss_pred eEEEeCCCCCeEEEec--------------------CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEE--eCCC
Q 015290 222 NSISNNSDCETFVSAD--------------------DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEF--HPIY 279 (409)
Q Consensus 222 ~~l~~~~~~~~l~~~~--------------------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~ 279 (409)
..+.|+|+++.++++. +.+|.+||+. .++.+..+++. ........+.| +|++
T Consensus 191 Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~-~~k~~~tI~vg-----~~g~~P~~i~f~~~Pdg 264 (462)
T 2ece_A 191 YDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR-KRKRIHSLTLG-----EENRMALELRPLHDPTK 264 (462)
T ss_dssp CCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT-TTEEEEEEESC-----TTEEEEEEEEECSSTTC
T ss_pred ceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC-CCcEeeEEecC-----CCCCccceeEeeECCCC
Confidence 3577899999888873 6899999999 56666665432 11223456656 9999
Q ss_pred CCEEEEEe------CCCeEEEEeCCCccccccccccccccccccCC--c----ccccccccceeeeEeccCCCEEEEeec
Q 015290 280 CNLLAYSS------SRGFVRLVDMRQSALCDHSARILRDAAESHGS--K----SFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 280 ~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
++++.++ .+++|.+|....++.. ..+.+.. ...+.. . ..|.+-......+.+||||++|.++..
T Consensus 265 -~~aYV~~e~~~~~Lss~V~v~~~d~g~~~--~~~vIdi-~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr 340 (462)
T 2ece_A 265 -LMGFINMVVSLKDLSSSIWLWFYEDGKWN--AEKVIEI-PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW 340 (462)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEETTEEE--EEEEEEE-CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET
T ss_pred -CEEEEEEeeeccCCCceEEEEEecCCcee--EEEEEeC-CCccccccccccccccccCCCceeEEEECCCCCEEEEEeC
Confidence 6666555 5678888776544321 1111111 000000 0 001111235788999999999998863
Q ss_pred --CeEEEEEccCCC--cceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 348 --MNLKLWDIRMDS--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 348 --~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
+.|.+||+...+ +.+..+...... ..........-......++++|||++|+++.
T Consensus 341 g~d~VavfdV~d~~~~~lv~~I~tGG~~-~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 341 GIGEVRQYDISNPFKPVLTGKVKLGGIF-HRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTEEEEEECSSTTSCEEEEEEECBTTT-TCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEEecCCCCcEEEEEEEeCCee-ccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999986322 344444432110 0000000000000014899999999998876
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.24 E-value=6.5e-09 Score=90.25 Aligned_cols=116 Identities=9% Similarity=0.063 Sum_probs=79.1
Q ss_pred ceeEEEeC----CCCCeEEEe--cCCeEEEEEccCCCcee--eeeecCCCcCcCcc-CceEEEEEeCCCCCEEEEEeCCC
Q 015290 220 NINSISNN----SDCETFVSA--DDLRINLWNLEISDQCF--NIVDMKPSNMDDLT-EVITSAEFHPIYCNLLAYSSSRG 290 (409)
Q Consensus 220 ~v~~l~~~----~~~~~l~~~--~d~~i~lwd~~~~~~~~--~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~s~dg 290 (409)
....++++ |+++.++.+ .++.|.+||....+... ..+ ..+..+. ..+..++++++| +++++...++
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~----~~~~~~~~~~p~~i~~d~~G-~l~v~~~~~~ 247 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVW----GHIPGTHEGGADGMDFDEDN-NLLVANWGSS 247 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEE----EECCCCSSCEEEEEEEBTTC-CEEEEEETTT
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEE----EECCCCCCCCCCceEECCCC-CEEEEEcCCC
Confidence 35678899 998766544 68899999976223211 111 0123333 567889999999 8888887888
Q ss_pred eEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEccC
Q 015290 291 FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRM 357 (409)
Q Consensus 291 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~~ 357 (409)
.|.+||..+++.. ..+.. +...+.+++|+|+|++|..++ . +.|..|++..
T Consensus 248 ~i~~~d~~~g~~~----~~~~~-------------~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 HIEVFGPDGGQPK----MRIRC-------------PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCBSCS----EEEEC-------------SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEEcCCCCcEe----EEEeC-------------CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999998755431 22222 124688999999999666554 3 7999999864
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.24 E-value=1.3e-08 Score=89.40 Aligned_cols=288 Identities=9% Similarity=0.015 Sum_probs=162.3
Q ss_pred EEEECCCCCEEEEEec-----CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 37 AIEFDKTGDYLAVGDR-----GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 37 ~v~~~~~~~~la~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
.....|+++.+++... ++.|.++|..+.+. +..+....
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v---------------------------~~~I~vG~---------- 79 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV---------------------------IGMIDGGF---------- 79 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE---------------------------EEEEEECS----------
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE---------------------------EEEEECCC----------
Confidence 3456789998888765 67999999987763 34443322
Q ss_pred eccceEEEEEEecCCCCEEEEEe----------CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCC
Q 015290 112 IEEKINRVRWCAAPNGSMFILST----------NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPS 181 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (409)
.+ . +.+ +|||+.++++. .++.|.+||..+.+............ ............+++
T Consensus 80 --~P-~-va~--spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r------~~~g~~P~~~a~spD 147 (386)
T 3sjl_D 80 --LP-N-PVV--ADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPR------FLVGTYPWMTSLTPD 147 (386)
T ss_dssp --SC-E-EEE--CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC------CCBSCCGGGEEECTT
T ss_pred --CC-c-EEE--CCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccc------cccCCCCceEEEcCC
Confidence 33 3 888 89999988775 36789999999988766543211000 000112333445566
Q ss_pred CceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCC
Q 015290 182 FAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 182 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
+.+++......++.|.++|+.+.. .+..+ ... + . ...+....+.+++. .||.+.+.++...+...... .+
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~~---vv~tI-~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~-~~- 218 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGKA---FKRML-DVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH-TE- 218 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTE---EEEEE-ECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEE-CC-
T ss_pred CCEEEEEEcCCCCeEEEEECCCCc---EEEEE-ECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEee-cc-
Confidence 677776655456789999998743 33322 110 1 0 11222223444444 77777777776323332211 00
Q ss_pred CcCcCccCceE-EEEEe-CCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccC
Q 015290 261 SNMDDLTEVIT-SAEFH-PIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND 338 (409)
Q Consensus 261 ~~~~~~~~~v~-~~~~~-p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 338 (409)
.+..-...+. ...|. ++| ++++ .+.+|.+.+.|+.+..... ...+..-.... ... .-.......++++++
T Consensus 219 -~~~~~~~~~~~~~~~~~~dG-~~~~-vs~~g~V~v~d~~~~~~~v--~~~~~~~~~~~-~~~--g~~p~g~q~~a~~~~ 290 (386)
T 3sjl_D 219 -VFHPEDEFLINHPAYSQKAG-RLVW-PTYTGKIHQIDLSSGDAKF--LPAVEALTEAE-RAD--GWRPGGWQQVAYHRA 290 (386)
T ss_dssp -CCSCTTSCBCSCCEEETTTT-EEEE-EBTTSEEEEEECTTSSCEE--CCCEESSCHHH-HHT--TEEECSSSCEEEETT
T ss_pred -eeccccccccccceeEcCCC-cEEE-EeCCCEEEEEECCCCccee--ecceecccccc-ccc--cccCCCcceeeECCC
Confidence 0111112221 23665 666 5444 5668999999997654210 11111000000 000 000123456788999
Q ss_pred CCEEEEee-----------cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC-eEEEc-ccC
Q 015290 339 GQHLLSRD-----------YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATG-SYR 405 (409)
Q Consensus 339 g~~l~sg~-----------~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~s~-s~d 405 (409)
++.+.... .+.|.+.|+.+ ++.+..+...... ++++++||++ +|+++ ..+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~vg~~~----------------~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEMGHEI----------------DSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEEEEE----------------CEEEECSSSSCEEEEEETTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEECCCCc----------------ceEEECCCCCeEEEEEcCCC
Confidence 98777642 15799999987 8888888765443 4899999997 66554 335
Q ss_pred CC
Q 015290 406 RD 407 (409)
Q Consensus 406 g~ 407 (409)
++
T Consensus 354 ~~ 355 (386)
T 3sjl_D 354 KT 355 (386)
T ss_dssp TE
T ss_pred Ce
Confidence 54
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=2.2e-08 Score=89.65 Aligned_cols=253 Identities=11% Similarity=0.076 Sum_probs=139.1
Q ss_pred CCCCEEEEEecC-----CeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccce
Q 015290 42 KTGDYLAVGDRG-----GRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKI 116 (409)
Q Consensus 42 ~~~~~la~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v 116 (409)
++++.+++.... +.|.++|..+.+. +..+..-. .+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~v---------------------------v~~I~vG~------------~P- 121 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRI---------------------------LGMTDGGF------------LP- 121 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEE---------------------------EEEEEECS------------SC-
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEE---------------------------EEEEECCC------------CC-
Confidence 477766666542 6999999988763 33333222 34
Q ss_pred EEEEEEecCCCCEEEEEe----------CCCeEEEEEcCCceeeeeeccC-CCcccccccccccccCceeccCCCCCcee
Q 015290 117 NRVRWCAAPNGSMFILST----------NDKTIKLWKVRDQKVKKIKEMD-HFPFVSSENTLLAEKNFMNEHNPPSFAHG 185 (409)
Q Consensus 117 ~~l~~~~s~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (409)
.+.+ +||++.++++. .++.|.++|..+.+........ .... ...........++++.++
T Consensus 122 -gia~--SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~-------~~g~~P~~~~~spDGk~l 191 (426)
T 3c75_H 122 -HPVA--AEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRF-------LVGTYQWMNALTPDNKNL 191 (426)
T ss_dssp -EEEE--CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC-------CBSCCGGGSEECTTSSEE
T ss_pred -ceEE--CCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccc-------ccCCCcceEEEcCCCCEE
Confidence 7899 89999988875 4678999999998876654422 0000 000111223334455555
Q ss_pred ecccccccceeEEEecCCcccceeeeee------ccc--------cc----------cce----------------eEEE
Q 015290 186 YHLEWTENMATKIANVGNSVHARCQKVY------PHA--------HD----------FNI----------------NSIS 225 (409)
Q Consensus 186 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~------~~~--------~~----------~~v----------------~~l~ 225 (409)
+......++.|.+.|+.+......+..- ..+ .. ..+ ..+.
T Consensus 192 yV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~ 271 (426)
T 3c75_H 192 LFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPA 271 (426)
T ss_dssp EEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCE
T ss_pred EEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEee
Confidence 5544333456666666653322111110 000 00 000 0123
Q ss_pred eCCCCCeEEEe-cCCeEEEEEccCCCce--eeeeecCCCcC---cCccCceEEEEEeCCCCCEEEEEeC----------C
Q 015290 226 NNSDCETFVSA-DDLRINLWNLEISDQC--FNIVDMKPSNM---DDLTEVITSAEFHPIYCNLLAYSSS----------R 289 (409)
Q Consensus 226 ~~~~~~~l~~~-~d~~i~lwd~~~~~~~--~~~~~~~~~~~---~~~~~~v~~~~~~p~~~~~l~s~s~----------d 289 (409)
+.+++..++.. ..+.+.+.|+. .... +..+.+..... .........++++|++ ..++.... +
T Consensus 272 ~~~dg~~~~~~s~~g~V~ViD~~-~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg-~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 272 FSLRSGRLVWPTYTGKIFQADLT-AEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS-DRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp ECTTTCEEEEEBTTSEEEEEEEC-SSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG-TEEEEEEEECCTTCTTSCE
T ss_pred ecCCCCEEEEEeCCCcEEEEecc-CCceEEeeeeeeccccccccccccCCceeeEEcCCC-CEEEEEecccccccccCCC
Confidence 34444444443 45566666664 2111 01110000000 0011112236899998 55444421 3
Q ss_pred CeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC-EEEEee--cCeEEEEEccCCCcceEEE
Q 015290 290 GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLLSRD--YMNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 290 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~sg~--~~~v~iwd~~~~~~~~~~~ 365 (409)
+.|.++|..+.+. +..+.. ......++|+|||+ ++++.. ++.|.++|+.+ .+.+..+
T Consensus 350 ~~VsVID~~T~kv----v~~I~v--------------g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t-~kvv~tI 409 (426)
T 3c75_H 350 RFVVVLNAETGER----INKIEL--------------GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT-GEELRSV 409 (426)
T ss_dssp EEEEEEETTTCCE----EEEEEE--------------EEEECEEEECCSSSCEEEEEETTTTEEEEEETTT-CCEEEEE
T ss_pred CEEEEEECCCCeE----EEEEEC--------------CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC-CCEEEEe
Confidence 5799999998764 233433 23578999999999 888776 39999999987 8888887
No 216
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.17 E-value=1.3e-07 Score=81.31 Aligned_cols=237 Identities=8% Similarity=-0.011 Sum_probs=144.0
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...+.+++++++|+++++...++.|..||.. ++. ....+....
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~--------------------------~~~~~~~~~---------- 103 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF--------------------------TEYPLPQPD---------- 103 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE--------------------------EEEECSSTT----------
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe--------------------------EEecCCCCC----------
Confidence 3678999999999887776667889999977 331 001111122
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
..+.++++ ++++.++++...++.|..++.. ++...... .. ...........+.+.+.....
T Consensus 104 --~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~-~~-----------~~~~~~~i~~d~~g~l~v~~~-- 164 (300)
T 2qc5_A 104 --SGPYGITE--GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL-PN-----------KGSYPAFITLGSDNALWFTEN-- 164 (300)
T ss_dssp --CCEEEEEE--CSTTCEEEEETTTTEEEEECTT-SCEEEEEC-SS-----------TTCCEEEEEECTTSSEEEEET--
T ss_pred --CCCccceE--CCCCCEEEEccCCCeEEEECCC-CCEEEccC-CC-----------CCCCceeEEECCCCCEEEEec--
Confidence 46889999 6888877777778899999987 54432211 00 001111122222222222111
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
.++.|..++... +............+..++++++++.+++. ..+.|..|+.. +...... .......+
T Consensus 165 ~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~--g~~~~~~------~~~~~~~~ 232 (300)
T 2qc5_A 165 QNNSIGRITNTG----KLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT--GEISEYD------IPTPNARP 232 (300)
T ss_dssp TTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT--CCEEEEE------CSSTTCCE
T ss_pred CCCeEEEECCCC----cEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC--CcEEEEE------CCCCCCCc
Confidence 134677776632 11111112344568899999999877777 77889999984 3332221 22344568
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeE
Q 015290 271 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNL 350 (409)
Q Consensus 271 ~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v 350 (409)
.+++++++| +++++...++.|..||.. +.. ..+.. ......+.+++++++|++.++.. +.|
T Consensus 233 ~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~-----~~~~~-----------~~~~~~~~~i~~~~~g~l~v~~~-~~i 293 (300)
T 2qc5_A 233 HAITAGKNS-EIWFTEWGANQIGRITND-NTI-----QEYQL-----------QTENAEPHGITFGKDGSVWFALK-CKI 293 (300)
T ss_dssp EEEEECSTT-CEEEEETTTTEEEEECTT-SCE-----EEEEC-----------CSTTCCCCCEEECTTSCEEEECS-SEE
T ss_pred eEEEECCCC-CEEEeccCCCeEEEECCC-CcE-----EEEEC-----------CccCCccceeEeCCCCCEEEEcc-Cce
Confidence 899999999 877777677899999983 332 11211 00123578899999998776665 366
Q ss_pred EEEEc
Q 015290 351 KLWDI 355 (409)
Q Consensus 351 ~iwd~ 355 (409)
..+|.
T Consensus 294 ~~~~p 298 (300)
T 2qc5_A 294 GKLNL 298 (300)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 66664
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.12 E-value=3e-08 Score=85.39 Aligned_cols=104 Identities=10% Similarity=0.064 Sum_probs=71.5
Q ss_pred ceeEEEeCCCCCeEEEe--cCCeEEEEEcc-CCCcee--eeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEE
Q 015290 220 NINSISNNSDCETFVSA--DDLRINLWNLE-ISDQCF--NIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRL 294 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~--~d~~i~lwd~~-~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~i 294 (409)
..+.++|+|+++.|+.+ .++.|.+|++. ..+... ..+ ..+..+...+..++++++| ++.++...++.|..
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~----~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSV----YKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIR 224 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEE----EECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEE
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEE----EECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEE
Confidence 45789999999877655 68899999974 233321 111 0123344567899999999 88888888889999
Q ss_pred EeCCCccccccccccccccccccCCcccccccccceeeeEec-cCCCEEEEe
Q 015290 295 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA-NDGQHLLSR 345 (409)
Q Consensus 295 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~sg 345 (409)
||..+++.. ..+.. +...+++++|. |+++.|...
T Consensus 225 ~d~~tG~~~----~~i~~-------------p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 225 LDPVTGKRL----QTVKL-------------PVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp ECTTTCCEE----EEEEC-------------SSSBEEEEEEESGGGCEEEEE
T ss_pred EcCCCceEE----EEEEC-------------CCCCceEEEEeCCCCCEEEEE
Confidence 999876542 22322 12468999998 888766544
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.03 E-value=9e-08 Score=86.24 Aligned_cols=215 Identities=11% Similarity=0.101 Sum_probs=125.5
Q ss_pred EEECCCCCEEEEEecCC--eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecC-CCccccccccceecc
Q 015290 38 IEFDKTGDYLAVGDRGG--RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQS-HEPEFDYLKSLEIEE 114 (409)
Q Consensus 38 v~~~~~~~~la~~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~ 114 (409)
++|+|+++.|+++..++ .|.+|+..++... +.+..+.. .. .
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~------------------------~~~g~~~~~~~------------~ 219 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP------------------------TRIGQLGSTFS------------G 219 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE------------------------EEEEECCTTSC------------S
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCcee------------------------EEeeeccchhc------------C
Confidence 89999999988888766 7888887654320 01111111 22 4
Q ss_pred ceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccc
Q 015290 115 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENM 194 (409)
Q Consensus 115 ~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (409)
.+.++++ +|++..|+.+..++.|+.||..++..........
T Consensus 220 ~p~~iav--~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~------------------------------------- 260 (409)
T 3hrp_A 220 KIGAVAL--DETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLEL------------------------------------- 260 (409)
T ss_dssp CCCBCEE--CTTSSEEEEECTTCEEEEEETTTCCEEEEEECCC-------------------------------------
T ss_pred CcEEEEE--eCCCCeEEEEECCCcEEEEECCCCCEEEEecccc-------------------------------------
Confidence 6778999 6744566667778899999988765332211000
Q ss_pred eeEEEecCCcccceeeeeecccccc--ceeEEEeCCC-CCeEEEe-cCCeEEEEEccCCCceeeeeecC-CCcC------
Q 015290 195 ATKIANVGNSVHARCQKVYPHAHDF--NINSISNNSD-CETFVSA-DDLRINLWNLEISDQCFNIVDMK-PSNM------ 263 (409)
Q Consensus 195 ~i~~~~~~~~~~~~~~~~~~~~~~~--~v~~l~~~~~-~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~-~~~~------ 263 (409)
.+... +...++|+|+ +.++++- .++.|+.|+.. +......... ....
T Consensus 261 --------------------~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~--g~~~~~~g~~~~~g~~dg~~~ 318 (409)
T 3hrp_A 261 --------------------SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD--GECEWFCGSATQKTVQDGLRE 318 (409)
T ss_dssp --------------------CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT--CCEEEEEECTTCCSCBCEEGG
T ss_pred --------------------cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC--CCEEEEEeCCCCCCcCCCccc
Confidence 11111 1138999996 4444455 78899999877 3222221110 0000
Q ss_pred cCccCceEEEEEeCCCCCEEEEEe-CCCeEEEEeCCCccccccccccccccccccCCc--ccccccccceeeeEeccCCC
Q 015290 264 DDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSK--SFFTEIIASISDIKFANDGQ 340 (409)
Q Consensus 264 ~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~s~~g~ 340 (409)
...-.....++++|+| +++++-+ .++.|+.||+.++.. ..+..+....... ......-.....++++++|.
T Consensus 319 ~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~~~~G~v-----~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~ 392 (409)
T 3hrp_A 319 EALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLDILDGYV-----STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG 392 (409)
T ss_dssp GCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEETTTTEE-----EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE
T ss_pred ccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEECCCCEE-----EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC
Confidence 0012347899999999 8888877 889999999777653 2222210000000 00000123578899999987
Q ss_pred EEEEeec-CeEEEEEc
Q 015290 341 HLLSRDY-MNLKLWDI 355 (409)
Q Consensus 341 ~l~sg~~-~~v~iwd~ 355 (409)
++++-.. +.|+.+++
T Consensus 393 lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 393 YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEESTTCEEEEEEE
T ss_pred EEEEECCCCeEEEEEe
Confidence 6666654 88887765
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.98 E-value=7.7e-10 Score=98.41 Aligned_cols=188 Identities=9% Similarity=-0.009 Sum_probs=95.2
Q ss_pred CCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceeccceEEEEEE
Q 015290 43 TGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWC 122 (409)
Q Consensus 43 ~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~ 122 (409)
++..+++++.||.|..||..+++. +-.+.. . .+.+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~---------------------------~W~~~~-~-------------~~~s~p~- 45 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI---------------------------KWTLKE-D-------------PVLQVPT- 45 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE---------------------------EEEEEC-C-------------CSCCCC--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE---------------------------EEEecC-C-------------Cceecce-
Confidence 577889999999999999988874 222222 1 2222333
Q ss_pred ecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecC
Q 015290 123 AAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVG 202 (409)
Q Consensus 123 ~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 202 (409)
..++..+++++.|+.|+.||..+++...........
T Consensus 46 -~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~------------------------------------------- 81 (369)
T 2hz6_A 46 -HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE------------------------------------------- 81 (369)
T ss_dssp -----CCEEECTTTCCEEEC-----CCSEECSCCHHH-------------------------------------------
T ss_pred -EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc-------------------------------------------
Confidence 256667777789999999999887654432210000
Q ss_pred CcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCC
Q 015290 203 NSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCN 281 (409)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 281 (409)
.....+ .+. .+..++++ .++.++.||.. +++.+..+ ..+. ...++|++ .
T Consensus 82 ------------~~~~sp----~~~-~~~~v~~g~~dg~v~a~D~~-tG~~~w~~-------~~~~----~~~~~p~~-~ 131 (369)
T 2hz6_A 82 ------------LVQASP----CRS-SDGILYMGKKQDIWYVIDLL-TGEKQQTL-------SSAF----ADSLSPST-S 131 (369)
T ss_dssp ------------HHTTCS----CC------CCCCEEEEEEEEECCC----------------------------------
T ss_pred ------------ccccCc----eEe-cCCEEEEEeCCCEEEEEECC-CCcEEEEe-------cCCC----cccccccC-C
Confidence 000011 111 23456667 88999999998 66655442 2221 23456777 8
Q ss_pred EEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCC---CEEEEee-cCeEEEEEccC
Q 015290 282 LLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG---QHLLSRD-YMNLKLWDIRM 357 (409)
Q Consensus 282 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g---~~l~sg~-~~~v~iwd~~~ 357 (409)
.+++++.|+.|+.||.++++.. ..+.. ......+++++. ..+++++ ++.|+.||.++
T Consensus 132 ~v~~~~~dg~v~a~d~~tG~~~----W~~~~---------------~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 132 LLYLGRTEYTITMYDTKTRELR----WNATY---------------FDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp -EEEEEEEEEEECCCSSSSSCC----CEEEE---------------EEECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred EEEEEecCCEEEEEECCCCCEE----EeEec---------------ccccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 8888999999999999988742 11111 011223344431 3444454 59999999986
Q ss_pred CCcceEEEe
Q 015290 358 DSTPVATFK 366 (409)
Q Consensus 358 ~~~~~~~~~ 366 (409)
++.+-.+.
T Consensus 193 -G~~~W~~~ 200 (369)
T 2hz6_A 193 -GDVLWIQN 200 (369)
T ss_dssp -CCEEEEEE
T ss_pred -CcEEEEec
Confidence 77766665
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.97 E-value=9.3e-08 Score=84.13 Aligned_cols=79 Identities=9% Similarity=-0.010 Sum_probs=56.8
Q ss_pred EEEeCCCCCEEEEE-e---C-----CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCE-E
Q 015290 273 AEFHPIYCNLLAYS-S---S-----RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH-L 342 (409)
Q Consensus 273 ~~~~p~~~~~l~s~-s---~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~-l 342 (409)
+.++|++ +.++.+ . . ++.+.++|+.+.+. +..+.. ......++|+|||++ +
T Consensus 269 v~~s~dg-~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v----v~~i~v--------------g~~p~gi~~s~Dg~~l~ 329 (368)
T 1mda_H 269 VAKLKNT-DGIMILTVEHSRSCLAAAENTSSVTASVGQT----SGPISN--------------GHDSDAIIAAQDGASDN 329 (368)
T ss_dssp EEEETTT-TEEEEEEEECSSCTTSCEEEEEEEESSSCCE----EECCEE--------------EEEECEEEECCSSSCEE
T ss_pred eEEcCCC-CEEEEEeccccCcccccCCCEEEEECCCCeE----EEEEEC--------------CCCcceEEECCCCCEEE
Confidence 6899999 655544 3 2 23566999998764 233333 235789999999984 4
Q ss_pred EEee--cCeEEEEEccCCCcceEEEecccCc
Q 015290 343 LSRD--YMNLKLWDIRMDSTPVATFKIHEHL 371 (409)
Q Consensus 343 ~sg~--~~~v~iwd~~~~~~~~~~~~~~~~~ 371 (409)
++.. ++.|.++|+.+ .+.+..+.....+
T Consensus 330 va~~~~~~~VsVID~~t-~kvv~~I~vg~~P 359 (368)
T 1mda_H 330 YANSAGTEVLDIYDAAS-DQDQSSVELDKGP 359 (368)
T ss_dssp EEEETTTTEEEEEESSS-CEEEEECCCCSCC
T ss_pred EEccCCCCeEEEEECCC-CcEEEEEECCCCC
Confidence 4444 49999999987 8888888877665
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=6.5e-07 Score=78.08 Aligned_cols=104 Identities=13% Similarity=-0.022 Sum_probs=67.5
Q ss_pred ceeEEEeCCCCCeEEEe--cCCeEEEEEcc-CCC-cee--eeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEE
Q 015290 220 NINSISNNSDCETFVSA--DDLRINLWNLE-ISD-QCF--NIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVR 293 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~--~d~~i~lwd~~-~~~-~~~--~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~ 293 (409)
....++|+|+++.++.+ .++.|.+|++. ..+ ... ..+. .+......+..++++++| ++.++...++.|.
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~----~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~ 254 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFI----DSTGIKGGMDGSVCDAEG-HIWNARWGEGAVD 254 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEE----ECTTSSSEEEEEEECTTS-CEEEEEETTTEEE
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEE----ECCCCCCCCCeeEECCCC-CEEEEEeCCCEEE
Confidence 35689999999877655 67899999985 123 211 1110 022233557889999999 8877776778899
Q ss_pred EEeCCCccccccccccccccccccCCcccccccccceeeeEec-cCCCEEEEee
Q 015290 294 LVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA-NDGQHLLSRD 346 (409)
Q Consensus 294 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~sg~ 346 (409)
+||.. ++. ...+.. +...+.+++|+ ++++.|+.++
T Consensus 255 ~~d~~-g~~----~~~i~~-------------~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 255 RYDTD-GNH----IARYEV-------------PGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EECTT-CCE----EEEEEC-------------SCSBEEEEEEESTTSCEEEEEE
T ss_pred EECCC-CCE----EEEEEC-------------CCCCcEEEEEecCCCCEEEEEe
Confidence 99984 332 122222 12368999998 8887665543
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.93 E-value=2.2e-07 Score=80.22 Aligned_cols=108 Identities=12% Similarity=-0.002 Sum_probs=67.0
Q ss_pred ceeEEEeCCCCCeEEEe-cC------CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeE
Q 015290 220 NINSISNNSDCETFVSA-DD------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFV 292 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~-~d------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i 292 (409)
..+.++|+|+++.|+.+ .. +.|..|++. ... +.....- ..........++++++| ++.++ ..+ .|
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~-~~~-l~~~~~~---~~~~~~~pdgi~~d~~G-~lwv~-~~~-gv 260 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR-DGA-LHDRRHF---ASVPDGLPDGFCVDRGG-WLWSS-SGT-GV 260 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE-TTE-EEEEEEE---ECCSSSCCCSEEECTTS-CEEEC-CSS-EE
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec-CCC-ccCCeEE---EECCCCCCCeEEECCCC-CEEEe-cCC-cE
Confidence 35679999999988776 54 789999987 332 2110000 11122345678999999 75544 344 49
Q ss_pred EEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEEEE
Q 015290 293 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWD 354 (409)
Q Consensus 293 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd 354 (409)
.+||..... ...+.. ...+..++|+|+++.|..++.+.+..++
T Consensus 261 ~~~~~~g~~-----~~~~~~--------------~~~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 261 CVFDSDGQL-----LGHIPT--------------PGTASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp EEECTTSCE-----EEEEEC--------------SSCCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred EEECCCCCE-----EEEEEC--------------CCceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 999985432 122322 1247889999999888877665554444
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.90 E-value=5.1e-07 Score=80.81 Aligned_cols=119 Identities=6% Similarity=-0.066 Sum_probs=76.5
Q ss_pred EecCCCCEEEEEeC-C----CeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc------
Q 015290 122 CAAPNGSMFILSTN-D----KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW------ 190 (409)
Q Consensus 122 ~~s~~~~~l~s~~~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 190 (409)
.|.++++.++++.. + +.|.++|..+++......... .. ....++++..++.+..
T Consensus 79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~--------------~P-gia~SpDgk~lyVan~~~~~~~ 143 (426)
T 3c75_H 79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF--------------LP-HPVAAEDGSFFAQASTVFERIA 143 (426)
T ss_dssp CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS--------------SC-EEEECTTSSCEEEEEEEEEETT
T ss_pred cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC--------------CC-ceEECCCCCEEEEEeccccccc
Confidence 44577777776644 2 699999999998876654321 12 3344555665555543
Q ss_pred --cccceeEEEecCCcccceeeeeecc-c----cccceeEEEeCCCCCeEEEe-c--CCeEEEEEccCCCceeeeeec
Q 015290 191 --TENMATKIANVGNSVHARCQKVYPH-A----HDFNINSISNNSDCETFVSA-D--DLRINLWNLEISDQCFNIVDM 258 (409)
Q Consensus 191 --~~~~~i~~~~~~~~~~~~~~~~~~~-~----~~~~v~~l~~~~~~~~l~~~-~--d~~i~lwd~~~~~~~~~~~~~ 258 (409)
..++.|.++|..+......+.. . . .......++++|||++++++ . ++.|.+.|+. +.+.+..+.+
T Consensus 144 ~G~~~~~VsviD~~t~~vv~~I~v--~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~-t~kvv~~I~v 218 (426)
T 3c75_H 144 RGKRTDYVEVFDPVTFLPIADIEL--PDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE-GKTFDRMLDV 218 (426)
T ss_dssp EEEEEEEEEEECTTTCCEEEEEEE--TTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT-TTEEEEEEEC
T ss_pred cCCCCCEEEEEECCCCcEEEEEEC--CCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC-CCeEEEEEEc
Confidence 1356899999987443332221 1 0 11234578999999999986 3 5789999999 6666666543
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=3.2e-07 Score=80.68 Aligned_cols=171 Identities=8% Similarity=0.069 Sum_probs=100.0
Q ss_pred ccccceeEEEeCCCCCeEEEe-c-----CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEe--
Q 015290 216 AHDFNINSISNNSDCETFVSA-D-----DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-- 287 (409)
Q Consensus 216 ~~~~~v~~l~~~~~~~~l~~~-~-----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s-- 287 (409)
.+...+..++++++++++++- . +..|.+||+. +++.+..+.+... ...+...+..++++|++...+++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~-tg~~~~~~~~~~~-~~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL-NNQLSRVIYLPPP-ITLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT-TTEEEEEEECCTT-TSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC-CCeEEEEEECChh-hcccccccceEEEecCCCEEEEEcCcc
Confidence 355678899999998766654 3 5899999998 6666666544311 1223456789999986525556655
Q ss_pred -CCCeEEEEeCCCcccccccccccccccc-ccCCc-ccccc--------------cccceeeeEeccCCCEEEEeec--C
Q 015290 288 -SRGFVRLVDMRQSALCDHSARILRDAAE-SHGSK-SFFTE--------------IIASISDIKFANDGQHLLSRDY--M 348 (409)
Q Consensus 288 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~--------------~~~~i~~~~~s~~g~~l~sg~~--~ 348 (409)
.++.|.+||+.+++.. +.+..|.. .+... -...+ ....+..++|+|||+.|+.+.. .
T Consensus 142 ~~~~~i~v~d~~~g~~~----r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~ 217 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAA----RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST 217 (343)
T ss_dssp GGGCEEEEEETTTCCEE----EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS
T ss_pred CCCCeEEEEECCCCCEE----EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC
Confidence 6789999999876531 22221100 00000 00000 0123678999999998887753 5
Q ss_pred eEEEEEccC--CCc--------ceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 349 NLKLWDIRM--DST--------PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 349 ~v~iwd~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
.|..++... .+. .+..+ ++.... ..++++++|.++++...++.|
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~p---------------dgia~d~~G~l~va~~~~~~V 271 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELGSKIERY-SEKPIC---------------DGISIDKDHNIYVGDLAHSAI 271 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSC---------------SCEEECTTCCEEEEEGGGTEE
T ss_pred eEEEEEHHHhcCCCCChhhhhcceEec-ccCCCC---------------ceEEECCCCCEEEEccCCCeE
Confidence 555555321 010 01111 111111 378999999888877766554
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.86 E-value=7.8e-06 Score=68.93 Aligned_cols=220 Identities=12% Similarity=0.116 Sum_probs=131.0
Q ss_pred CcEEEEEECCCCCEEEEE-ecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 33 DIVSAIEFDKTGDYLAVG-DRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
..+..++|++++..|..+ ..++.|..++..+... ...+...-
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~---------------------------~~~~~~~~---------- 78 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP---------------------------TTIIRQDL---------- 78 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC---------------------------EEEECTTC----------
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc---------------------------EEEEECCC----------
Confidence 356799999976655554 4568999999876542 11111111
Q ss_pred eccceEEEEEEecCCCCEEEEE-eCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILS-TNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
.....+++ ++++..|+.+ ...+.|.++++.........
T Consensus 79 --~~p~~ia~--d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~------------------------------------- 117 (267)
T 1npe_A 79 --GSPEGIAL--DHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF------------------------------------- 117 (267)
T ss_dssp --CCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEE-------------------------------------
T ss_pred --CCccEEEE--EecCCeEEEEECCCCEEEEEEcCCCCEEEEE-------------------------------------
Confidence 35788999 5765555544 55678888887643221110
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe--c--CCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA--D--DLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~--~--d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
.........++++|++..|+.+ . .+.|..+++. +.....+ ....
T Consensus 118 ------------------------~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d--g~~~~~~------~~~~ 165 (267)
T 1npe_A 118 ------------------------DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD--GTNRRIL------AQDN 165 (267)
T ss_dssp ------------------------CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT--SCCCEEE------ECTT
T ss_pred ------------------------ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC--CCCcEEE------EECC
Confidence 1111345789999976665554 3 4688888876 3222221 1112
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
......++++|++..++++-...+.|.++|....... ..... ......++.. +..|..+.
T Consensus 166 ~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~----~~~~~--------------~~~P~gi~~d--~~~lyva~ 225 (267)
T 1npe_A 166 LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR----KVLEG--------------LQYPFAVTSY--GKNLYYTD 225 (267)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE----EEEEC--------------CCSEEEEEEE--TTEEEEEE
T ss_pred CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE----EEecC--------------CCCceEEEEe--CCEEEEEE
Confidence 2457899999987245555566789999998754321 11111 1123455554 45555553
Q ss_pred -c-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC
Q 015290 347 -Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 397 (409)
Q Consensus 347 -~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 397 (409)
. +.|..+|..+ ++.+..+.......+ ..+++.|++.
T Consensus 226 ~~~~~v~~~d~~~-g~~~~~i~~g~~~~p--------------~gi~~~~~~~ 263 (267)
T 1npe_A 226 WKTNSVIAMDLAI-SKEMDTFHPHKQTRL--------------YGITIALSQC 263 (267)
T ss_dssp TTTTEEEEEETTT-TEEEEEECCSSCCCC--------------CCEEEECSCC
T ss_pred CCCCeEEEEeCCC-CCceEEEcccccccc--------------ceeeecCccC
Confidence 4 8999999875 787888764432111 4788888875
No 226
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.84 E-value=2.5e-07 Score=85.04 Aligned_cols=110 Identities=10% Similarity=0.030 Sum_probs=67.9
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcccc------cc--ccccccccccccCCcccccccccceeeeEeccCCC
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALC------DH--SARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 340 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 340 (409)
...++.++|||...++++..+.+|.++|+.+.+.. .. ....... ......++|+|+|
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v--------------G~gP~h~aF~~dG- 342 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL--------------GLGPLHTAFDGRG- 342 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC--------------CSCEEEEEECTTS-
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC--------------CCCcceEEECCCC-
Confidence 45689999999334445557889999999864210 00 0011111 2356789999999
Q ss_pred EEEEee--cCeEEEEEccCC---------CcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 341 HLLSRD--YMNLKLWDIRMD---------STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 341 ~l~sg~--~~~v~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
++.+.. +++|.+||+... .+.+..+..|-.+.- .. .. ....++|||++|+++.
T Consensus 343 ~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh-~~------~~---~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 343 NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGH-LK------TV---MGETLDATNDWLVCLS 406 (595)
T ss_dssp EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEE-EE------ET---TTTSTTCCSSEEEEEE
T ss_pred eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccccc-ce------ec---cceEeCCCCCEEEEcC
Confidence 666654 499999998741 345666665543210 00 00 1456789999998764
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.82 E-value=1.9e-07 Score=90.41 Aligned_cols=186 Identities=13% Similarity=0.086 Sum_probs=111.7
Q ss_pred cceEEEEEEecCCCCEEEEEe-----CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 114 EKINRVRWCAAPNGSMFILST-----NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~-----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
..+..++| ||||++|+.+. .+..|++||+.+++......
T Consensus 129 ~~l~~~~~--SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~---------------------------------- 172 (693)
T 3iuj_A 129 TALDQLSF--SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL---------------------------------- 172 (693)
T ss_dssp CEEEEEEE--CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE----------------------------------
T ss_pred EEEEEEEE--CCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc----------------------------------
Confidence 46888899 89999888542 22578999998876432200
Q ss_pred cccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCC-------------eEEEEEccCCCce-e
Q 015290 189 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDL-------------RINLWNLEISDQC-F 253 (409)
Q Consensus 189 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~-------------~i~lwd~~~~~~~-~ 253 (409)
.. .....++|+ |++.|+.+ .+. .|++|++.+.... .
T Consensus 173 --------------------------~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 223 (693)
T 3iuj_A 173 --------------------------KD--VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDR 223 (693)
T ss_dssp --------------------------EE--EESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCE
T ss_pred --------------------------CC--ceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccce
Confidence 00 112456899 99888877 553 4899998733221 2
Q ss_pred eeeecCCCcCcC-ccCceEEEEEeCCCCCEEEEEe----CCCeEEEEeCCCccccccccccccccccccCCccccccccc
Q 015290 254 NIVDMKPSNMDD-LTEVITSAEFHPIYCNLLAYSS----SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 328 (409)
Q Consensus 254 ~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~s----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
.++ .... |...+.++.|+|+| ++|+... .++.|.++|+.++... ...+.. +..
T Consensus 224 ~v~-----~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~~~~~---~~~l~~-------------~~~ 281 (693)
T 3iuj_A 224 LVF-----GAIPAQHHRYVGATVTEDD-RFLLISAANSTSGNRLYVKDLSQENAP---LLTVQG-------------DLD 281 (693)
T ss_dssp EEE-----SCSGGGCCSEEEEEECTTS-CEEEEEEESSSSCCEEEEEETTSTTCC---CEEEEC-------------SSS
T ss_pred EEE-----ecCCCCCeEEEEEEEcCCC-CEEEEEEccCCCCcEEEEEECCCCCCc---eEEEeC-------------CCC
Confidence 221 1233 45567899999999 7665433 2358999998775321 122222 122
Q ss_pred ceeeeEeccCCCEEE-Eee-c---CeEEEEEccCCCcc--eEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEE
Q 015290 329 SISDIKFANDGQHLL-SRD-Y---MNLKLWDIRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT 401 (409)
Q Consensus 329 ~i~~~~~s~~g~~l~-sg~-~---~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 401 (409)
..... |+++|..|+ ... + +.|..+|+.. +.. ...+..+...+ +.|+++++.|+.
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~-----------------~~~s~~g~~lv~ 342 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN-PGPAHWRDLIPERQQV-----------------LTVHSGSGYLFA 342 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS-CCGGGCEEEECCCSSC-----------------EEEEEETTEEEE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC-CCccccEEEecCCCCE-----------------EEEEEECCEEEE
Confidence 23333 667776555 332 2 6799999875 333 34555555432 288888887776
Q ss_pred cccC
Q 015290 402 GSYR 405 (409)
Q Consensus 402 ~s~d 405 (409)
...+
T Consensus 343 ~~~~ 346 (693)
T 3iuj_A 343 EYMV 346 (693)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 228
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.81 E-value=9e-06 Score=70.10 Aligned_cols=236 Identities=11% Similarity=0.121 Sum_probs=129.1
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
.....++|+++|+++++-..++.|..||..+... ..+. -.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~----------------------------~~~~-~~----------- 71 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ----------------------------IHAT-VE----------- 71 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE----------------------------EEEE-CS-----------
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE----------------------------EEEe-CC-----------
Confidence 4577899999999777766788999998765321 1111 11
Q ss_pred ccceEEEEEEecCCCCEEEEEeCC-C-eEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTND-K-TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d-~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
..+..+++ +++|+++++.... + .|..++..+++.......
T Consensus 72 -~~p~gia~--~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~----------------------------------- 113 (306)
T 2p4o_A 72 -GKVSGLAF--TSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL----------------------------------- 113 (306)
T ss_dssp -SEEEEEEE--CTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC-----------------------------------
T ss_pred -CCceeEEE--cCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC-----------------------------------
Confidence 46788999 7889866655433 2 355566666654332110
Q ss_pred cccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCc-eeeeeec--CCCcCcCc
Q 015290 191 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ-CFNIVDM--KPSNMDDL 266 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~-~~~~~~~--~~~~~~~~ 266 (409)
........++..+++..+++- .++.|..+|.. .+. .+..... ........
T Consensus 114 -------------------------~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~-~~~~~v~~~~~~~~~~~~~~~ 167 (306)
T 2p4o_A 114 -------------------------PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV-QPSGSIWLEHPMLARSNSESV 167 (306)
T ss_dssp -------------------------TTCSCEEEEEESSSSEEEEEETTTTEEEEEETT-TTEEEEEEECGGGSCSSTTCC
T ss_pred -------------------------CCccccCcccccCCCcEEEEECCCCeEEEEeCC-CCcEeEEEECCccccccccCC
Confidence 000112233444444444444 57888888876 221 1111000 00001111
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCC-ccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQ-SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
-.....+ +|++..++++-...+.|..||+.. ++.. ....+.. ......++++++|++.++.
T Consensus 168 ~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~--~~~~~~~--------------~~~P~gi~vd~dG~l~va~ 229 (306)
T 2p4o_A 168 FPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG--EPEIFVE--------------QTNIDDFAFDVEGNLYGAT 229 (306)
T ss_dssp SCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC--CCEEEEE--------------SCCCSSEEEBTTCCEEEEC
T ss_pred CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC--ccEEEec--------------cCCCCCeEECCCCCEEEEe
Confidence 1234555 788723445556678999999875 3211 0111111 1245778999999876665
Q ss_pred ec-CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEc---CCCCeEEEcccC
Q 015290 346 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVS---GDGLHFATGSYR 405 (409)
Q Consensus 346 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---pdg~~l~s~s~d 405 (409)
.. +.|.++|.. ++........... ...++++|. ||++.|..++..
T Consensus 230 ~~~~~V~~~~~~--G~~~~~~~~~~~~-------------~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 230 HIYNSVVRIAPD--RSTTIIAQAEQGV-------------IGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp BTTCCEEEECTT--CCEEEEECGGGTC-------------TTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCCCeEEEECCC--CCEEEEeeccccc-------------CCceEEEEecccCCCCEEEEECCC
Confidence 54 899999964 5543221111110 012689999 898777655543
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.78 E-value=2.5e-06 Score=81.97 Aligned_cols=140 Identities=9% Similarity=0.041 Sum_probs=90.0
Q ss_pred eCCCC---CeEEEe-cCCeEEEEEccCCCceeeeeecCCCcC-----------------------------cCccCceEE
Q 015290 226 NNSDC---ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM-----------------------------DDLTEVITS 272 (409)
Q Consensus 226 ~~~~~---~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~v~~ 272 (409)
...+| +.++.+ .+|.++++|.. +++.+..+...+... .+... -..
T Consensus 320 ~~~dG~~~~~l~~~~~~G~l~~lD~~-tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~-w~~ 397 (677)
T 1kb0_A 320 IKIAGKPRKVILHAPKNGFFFVLDRT-NGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN-WHP 397 (677)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETT-TCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC-SSC
T ss_pred cccCCcEeeEEEEECCCCEEEEEECC-CCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC-CCC
Confidence 33466 577788 99999999998 677665544322110 00000 125
Q ss_pred EEEeCCCCCEEEEEeC-------------------------------------------CCeEEEEeCCCcccccccccc
Q 015290 273 AEFHPIYCNLLAYSSS-------------------------------------------RGFVRLVDMRQSALCDHSARI 309 (409)
Q Consensus 273 ~~~~p~~~~~l~s~s~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~ 309 (409)
++++|++ .++++... .|.|..||+.+++. .
T Consensus 398 ~a~dp~~-~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~------~ 470 (677)
T 1kb0_A 398 MSFNPQT-GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA------A 470 (677)
T ss_dssp CEEETTT-TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE------E
T ss_pred ceEcCCC-CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE------E
Confidence 7889987 77766532 27799999988864 2
Q ss_pred ccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCcccee
Q 015290 310 LRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKF 388 (409)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 388 (409)
|.. . +..++....+..++.+++.++ ++.+++||.++ ++.+..+........ .
T Consensus 471 W~~-~-----------~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t-G~~lw~~~~~~~~~~--------------~ 523 (677)
T 1kb0_A 471 WSV-E-----------HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT-GEKLWEAPTGTGVVA--------------A 523 (677)
T ss_dssp EEE-E-----------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT-CCEEEEEECSSCCCS--------------C
T ss_pred eec-C-----------CCCCCcCcceEeCCCEEEEECCCCcEEEEECCC-CceeeeeeCCCCccc--------------C
Confidence 222 0 012345556777788888886 49999999987 899988875543321 2
Q ss_pred eEEEcCCCCeEEE
Q 015290 389 ECSVSGDGLHFAT 401 (409)
Q Consensus 389 ~~~~spdg~~l~s 401 (409)
-+.|.++|+.++.
T Consensus 524 p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 524 PSTYMVDGRQYVS 536 (677)
T ss_dssp CEEEEETTEEEEE
T ss_pred CEEEEeCCEEEEE
Confidence 4677788875443
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.76 E-value=6.1e-06 Score=68.63 Aligned_cols=209 Identities=7% Similarity=-0.021 Sum_probs=125.8
Q ss_pred cEEEEEECCCCCEEEEEec--CCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeec--CCCcccccccc
Q 015290 34 IVSAIEFDKTGDYLAVGDR--GGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQ--SHEPEFDYLKS 109 (409)
Q Consensus 34 ~v~~v~~~~~~~~la~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~~~~~~~ 109 (409)
....+.|++|+.++++.+. ++.|.++|..+++. +..+. .+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v---------------------------~~~i~l~~~~-------- 66 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKV---------------------------ENIHKMDDSY-------- 66 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCE---------------------------EEEEECCTTC--------
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE---------------------------EEEEecCCCc--------
Confidence 4678999998765555443 57999999998874 22221 221
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
....+++ . .++..++.-.++.+.++|..+.+.......
T Consensus 67 -----fgeGi~~--~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~---------------------------------- 104 (266)
T 2iwa_A 67 -----FGEGLTL--L-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTH---------------------------------- 104 (266)
T ss_dssp -----CEEEEEE--E-TTEEEEEETTCSEEEEEETTTTEEEEEEEC----------------------------------
T ss_pred -----ceEEEEE--e-CCEEEEEEecCCEEEEEECCCCcEEEEEEC----------------------------------
Confidence 2234555 2 233444556778999999988776554321
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccC
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 268 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 268 (409)
+ ... ...+++|++.++.+ .++.|.++|.. +.+....+.+... ...-.
T Consensus 105 --------------------------g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~-t~~v~~~I~Vg~~--~~p~~ 152 (266)
T 2iwa_A 105 --------------------------Q-MKD--GWGLATDGKILYGSDGTSILYEIDPH-TFKLIKKHNVKYN--GHRVI 152 (266)
T ss_dssp --------------------------C-SSS--CCEEEECSSSEEEECSSSEEEEECTT-TCCEEEEEECEET--TEECC
T ss_pred --------------------------C-CCC--eEEEEECCCEEEEECCCCeEEEEECC-CCcEEEEEEECCC--Ccccc
Confidence 1 011 12345578888888 88899999998 5555555432210 01112
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEE-eec
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS-RDY 347 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s-g~~ 347 (409)
.++.+.|. +| .+++....++.|.+.|..+++.. ..+......+.....-..-....+.++|+|+++.++. +..
T Consensus 153 ~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~----~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 153 RLNELEYI-NG-EVWANIWQTDCIARISAKDGTLL----GWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp CEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEE----EEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred cceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEE----EEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 46788888 66 66666667889999999998752 2222100000000000000135689999999876655 444
Q ss_pred -CeEEEEEccC
Q 015290 348 -MNLKLWDIRM 357 (409)
Q Consensus 348 -~~v~iwd~~~ 357 (409)
+.|...++..
T Consensus 227 ~~~v~~i~l~~ 237 (266)
T 2iwa_A 227 WPKLFEIKLHL 237 (266)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEec
Confidence 8888888864
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.76 E-value=5.7e-07 Score=82.67 Aligned_cols=141 Identities=11% Similarity=0.031 Sum_probs=88.3
Q ss_pred eeEEEecCCccccee-eeeeccccccceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCc-----------eeeeeecCC
Q 015290 195 ATKIANVGNSVHARC-QKVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQ-----------CFNIVDMKP 260 (409)
Q Consensus 195 ~i~~~~~~~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~-----------~~~~~~~~~ 260 (409)
.|.+.|..+.. ... +... .-.....++.++|||++++++ .+.+|.++|+..... ....
T Consensus 255 ~V~VID~~~~~-~~~~~~~I--pvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~----- 326 (595)
T 1fwx_A 255 GVKVVDGRKEA-SSLFTRYI--PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE----- 326 (595)
T ss_dssp TEEEEECSGGG-CCSSEEEE--EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC-----
T ss_pred cEEEEeCcccC-CceeEEEE--ecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE-----
Confidence 47777776521 112 1221 122345789999999988876 789999999983210 1111
Q ss_pred CcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcc------ccccccccccccccccCCccccc-ccccceeee
Q 015290 261 SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSA------LCDHSARILRDAAESHGSKSFFT-EIIASISDI 333 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 333 (409)
. .-......++|+|+| ...++.-.|+.|.+||+.... .....+..+..| +. +|...-..+
T Consensus 327 --v-~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~---------yqpGh~~~~~g~ 393 (595)
T 1fwx_A 327 --P-ELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH---------YQPGHLKTVMGE 393 (595)
T ss_dssp --C-BCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS---------SCEEEEEETTTT
T ss_pred --c-CCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc---------cccccceeccce
Confidence 1 122457899999999 877788889999999987621 001111222221 11 344444566
Q ss_pred EeccCCCEEEEeec---CeE-----------EEEEcc
Q 015290 334 KFANDGQHLLSRDY---MNL-----------KLWDIR 356 (409)
Q Consensus 334 ~~s~~g~~l~sg~~---~~v-----------~iwd~~ 356 (409)
+++|||++|++... .++ .++|+.
T Consensus 394 t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis 430 (595)
T 1fwx_A 394 TLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDIS 430 (595)
T ss_dssp STTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECS
T ss_pred EeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcC
Confidence 88999999998753 444 889995
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.72 E-value=8.6e-07 Score=77.99 Aligned_cols=70 Identities=4% Similarity=-0.136 Sum_probs=52.8
Q ss_pred EEeCCCCCeEEEe-c-C--------CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEe-CCCeE
Q 015290 224 ISNNSDCETFVSA-D-D--------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFV 292 (409)
Q Consensus 224 l~~~~~~~~l~~~-~-d--------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s-~dg~i 292 (409)
++++|+++.++.+ . . +.+.++|+. +.+.+..+ ... .....++|+|+|..++++.. .++.|
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~-t~~vv~~i-------~vg-~~p~gi~~s~Dg~~l~va~~~~~~~V 339 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS-VGQTSGPI-------SNG-HDSDAIIAAQDGASDNYANSAGTEVL 339 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS-SCCEEECC-------EEE-EEECEEEECCSSSCEEEEEETTTTEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECC-CCeEEEEE-------ECC-CCcceEEECCCCCEEEEEccCCCCeE
Confidence 7899999988876 5 3 367799998 66666553 211 25789999999934667777 59999
Q ss_pred EEEeCCCccc
Q 015290 293 RLVDMRQSAL 302 (409)
Q Consensus 293 ~iwd~~~~~~ 302 (409)
.++|+.+++.
T Consensus 340 sVID~~t~kv 349 (368)
T 1mda_H 340 DIYDAASDQD 349 (368)
T ss_dssp EEEESSSCEE
T ss_pred EEEECCCCcE
Confidence 9999999875
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.72 E-value=6.7e-06 Score=79.16 Aligned_cols=79 Identities=8% Similarity=0.020 Sum_probs=52.6
Q ss_pred CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEec
Q 015290 289 RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKI 367 (409)
Q Consensus 289 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~ 367 (409)
+|.|..||+.+++.. |.. .. ..+.....+...+.+++.|+ |+.|+.||.++ ++.+-.++.
T Consensus 454 ~g~l~A~D~~tG~~~------W~~-~~-----------~~~~~~g~~~tagglvf~gt~dg~l~a~D~~t-G~~lw~~~~ 514 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAA------WEV-PY-----------VTIFNGGTLSTAGNLVFEGSADGRVIAYAADT-GEKLWEQPA 514 (689)
T ss_dssp EEEEEEEETTTTEEE------EEE-EE-----------SSSCCCCEEEETTTEEEEECTTSEEEEEETTT-CCEEEEEEC
T ss_pred ceeEEEEECCCCCeE------eEc-cC-----------CCCccCccceECCCEEEEECCCCcEEEEECCC-CccceeeeC
Confidence 377888999888742 222 00 12233445666778888887 59999999987 898888876
Q ss_pred ccCcccccccccCCCCccceeeEEEcCCCCeEE
Q 015290 368 HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA 400 (409)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 400 (409)
...... .-+.|..||+..+
T Consensus 515 ~~~~~~--------------~p~ty~~~G~qyv 533 (689)
T 1yiq_A 515 ASGVMA--------------APVTYSVDGEQYV 533 (689)
T ss_dssp SSCCCS--------------CCEEEEETTEEEE
T ss_pred CCCccc--------------CceEEEECCEEEE
Confidence 544321 2477788887443
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.71 E-value=4.1e-06 Score=69.67 Aligned_cols=198 Identities=8% Similarity=-0.004 Sum_probs=113.9
Q ss_pred ceEEEEEEecCCCCEEEEEeC--CCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 115 KINRVRWCAAPNGSMFILSTN--DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 115 ~v~~l~~~~s~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
....+.| ++++.++++.+. ++.|.+.|+.+++........
T Consensus 22 f~~Gl~~--~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~------------------------------------ 63 (266)
T 2iwa_A 22 FTQGLVY--AENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD------------------------------------ 63 (266)
T ss_dssp CEEEEEE--CSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC------------------------------------
T ss_pred CcccEEE--eCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC------------------------------------
Confidence 3678999 677754444443 579999999998876543211
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEE-Ee-cCCeEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFV-SA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
.+ .....+++. ++.|. +. .++.+.++|.. +.+.+..+... .++
T Consensus 64 -----------------------~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~-t~~v~~~i~~g----~~~---- 108 (266)
T 2iwa_A 64 -----------------------DS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRR-TLSNIKNFTHQ----MKD---- 108 (266)
T ss_dssp -----------------------TT-CCEEEEEEE--TTEEEEEETTCSEEEEEETT-TTEEEEEEECC----SSS----
T ss_pred -----------------------CC-cceEEEEEe--CCEEEEEEecCCEEEEEECC-CCcEEEEEECC----CCC----
Confidence 11 111234554 44554 45 89999999998 67777765322 011
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-Ce
Q 015290 271 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MN 349 (409)
Q Consensus 271 ~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~ 349 (409)
...++++| +.++.+..++.|.++|..+.+.. ..+.. ...+ ..-..++.+.|. +|+..+.... +.
T Consensus 109 -g~glt~Dg-~~l~vs~gs~~l~viD~~t~~v~----~~I~V-g~~~-------~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 109 -GWGLATDG-KILYGSDGTSILYEIDPHTFKLI----KKHNV-KYNG-------HRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp -CCEEEECS-SSEEEECSSSEEEEECTTTCCEE----EEEEC-EETT-------EECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred -eEEEEECC-CEEEEECCCCeEEEEECCCCcEE----EEEEE-CCCC-------cccccceeEEEE-CCEEEEecCCCCe
Confidence 12355677 54555556889999999886542 22222 0000 001236678888 6755444434 99
Q ss_pred EEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 350 LKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 350 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
|.+-|..+ ++.+..+............ ..........++|+|+++.|+.++
T Consensus 174 V~vID~~t-g~V~~~I~~~g~~~~~~~~--~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 174 IARISAKD-GTLLGWILLPNLRKKLIDE--GFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEEEETTT-CCEEEEEECHHHHHHHHHT--TCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCC-CcEEEEEECCCcccccccc--cccccCceEEEEEcCCCCEEEEEC
Confidence 99999986 8888888743100000000 000000015899999987655433
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.69 E-value=5.7e-09 Score=92.82 Aligned_cols=148 Identities=10% Similarity=0.106 Sum_probs=74.9
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecCCc
Q 015290 125 PNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNS 204 (409)
Q Consensus 125 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 204 (409)
-++..+++++.|+.|..||..+++.......
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~------------------------------------------------- 37 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE------------------------------------------------- 37 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC-------------------------------------------------
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC-------------------------------------------------
Confidence 3577999999999999999999987655321
Q ss_pred ccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceE-EEEEeCCCCCE
Q 015290 205 VHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT-SAEFHPIYCNL 282 (409)
Q Consensus 205 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~ 282 (409)
..+.+..+..++..++++ .|+.|+.||.. +++.+..+... ....+. +..+. .+ ..
T Consensus 38 --------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~-tG~~~w~~~~~------~~~~~~~sp~~~-~~-~~ 94 (369)
T 2hz6_A 38 --------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK-NNEGLTKLPFT------IPELVQASPCRS-SD-GI 94 (369)
T ss_dssp --------------CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSCC------HHHHHTTCSCC-------
T ss_pred --------------CCceecceEcCCCEEEEeCCCCEEEEEECC-CCceeeeeecc------CccccccCceEe-cC-CE
Confidence 112222233567777887 99999999997 55544332111 000010 01111 23 56
Q ss_pred EEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcc
Q 015290 283 LAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTP 361 (409)
Q Consensus 283 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~ 361 (409)
+++++.++.|+.||.++++.. ..+..+ . ...++|++..|++++ ++.|+.||.++ ++.
T Consensus 95 v~~g~~dg~v~a~D~~tG~~~----w~~~~~--------------~---~~~~~p~~~~v~~~~~dg~v~a~d~~t-G~~ 152 (369)
T 2hz6_A 95 LYMGKKQDIWYVIDLLTGEKQ----QTLSSA--------------F---ADSLSPSTSLLYLGRTEYTITMYDTKT-REL 152 (369)
T ss_dssp CCCCEEEEEEEEECCC-------------------------------------------EEEEEEEEEEECCCSSS-SSC
T ss_pred EEEEeCCCEEEEEECCCCcEE----EEecCC--------------C---cccccccCCEEEEEecCCEEEEEECCC-CCE
Confidence 777888999999999998742 222220 0 134566778888876 49999999986 666
Q ss_pred eEEEe
Q 015290 362 VATFK 366 (409)
Q Consensus 362 ~~~~~ 366 (409)
+-.+.
T Consensus 153 ~W~~~ 157 (369)
T 2hz6_A 153 RWNAT 157 (369)
T ss_dssp CCEEE
T ss_pred EEeEe
Confidence 55544
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.67 E-value=4.5e-05 Score=64.24 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=70.2
Q ss_pred ceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC--CCeEEEE
Q 015290 220 NINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS--RGFVRLV 295 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~--dg~i~iw 295 (409)
....+++++++..|+.+ ..+.|.++++. ... ...+ ..........++++|++..++++... .+.|..+
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~-g~~-~~~~------~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMD-GTQ-RRVL------FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCS-CEEE------ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcC-CCC-EEEE------EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 45789999976666554 67899999987 322 2221 11112456899999965144444433 4688888
Q ss_pred eCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 296 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 296 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
++..... ..+.. ........++++|++..|..+. . +.|.++|+.
T Consensus 152 ~~dg~~~-----~~~~~------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 152 HMDGTNR-----RILAQ------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp ETTSCCC-----EEEEC------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ecCCCCc-----EEEEE------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 8764321 11111 0013467899999988777664 3 899999986
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.66 E-value=1.6e-05 Score=69.11 Aligned_cols=121 Identities=11% Similarity=0.046 Sum_probs=72.9
Q ss_pred ceeEEEeCC-CCCeEEEe-c-----------------CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCC
Q 015290 220 NINSISNNS-DCETFVSA-D-----------------DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYC 280 (409)
Q Consensus 220 ~v~~l~~~~-~~~~l~~~-~-----------------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 280 (409)
....+++.+ +|+..++. . ++.|..||.. .+...... . .-.....++++|++
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~~~-------~-~~~~p~gia~~~dg- 196 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS-TKETTLLL-------K-ELHVPGGAEVSADS- 196 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT-TTEEEEEE-------E-EESCCCEEEECTTS-
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC-CCEEEEec-------c-CCccCcceEECCCC-
Confidence 356788888 88766654 2 2667778875 33322111 1 11234679999998
Q ss_pred CEEE-EEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe-e----------cC
Q 015290 281 NLLA-YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-D----------YM 348 (409)
Q Consensus 281 ~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg-~----------~~ 348 (409)
+.|+ +-...+.|.+|++...... ....+.. ..+ ...++++++|++.++. . .+
T Consensus 197 ~~lyv~d~~~~~I~~~~~~~~~~~--~~~~~~~-------------~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~ 260 (322)
T 2fp8_A 197 SFVLVAEFLSHQIVKYWLEGPKKG--TAEVLVK-------------IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDP 260 (322)
T ss_dssp SEEEEEEGGGTEEEEEESSSTTTT--CEEEEEE-------------CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcCC--ccceEEe-------------CCC-CCCeEECCCCCEEEEecCcccccccCCCcc
Confidence 7554 4456789999998753210 0111111 012 5678999999866654 3 25
Q ss_pred eEEEEEccCCCcceEEEecc
Q 015290 349 NLKLWDIRMDSTPVATFKIH 368 (409)
Q Consensus 349 ~v~iwd~~~~~~~~~~~~~~ 368 (409)
.|..+|.. ++.+..+...
T Consensus 261 ~v~~~d~~--G~~~~~~~~~ 278 (322)
T 2fp8_A 261 KGIKFDEF--GNILEVIPLP 278 (322)
T ss_dssp EEEEECTT--SCEEEEEECC
T ss_pred EEEEECCC--CCEEEEEECC
Confidence 67788864 7777777654
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.63 E-value=7.5e-06 Score=67.31 Aligned_cols=196 Identities=11% Similarity=0.091 Sum_probs=113.7
Q ss_pred cceEEEEEEecCCCCEEEEEeCCC--eEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDK--TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
.-...|.| + ++.++.+.+.+| .|+.+|+.+++........
T Consensus 43 ~ftqGL~~--~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~----------------------------------- 84 (262)
T 3nol_A 43 AFTEGFFY--R-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG----------------------------------- 84 (262)
T ss_dssp CEEEEEEE--E-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-----------------------------------
T ss_pred cccceEEE--E-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-----------------------------------
Confidence 34578899 4 666666777766 8999999999876553311
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEE-e-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 269 (409)
....--.+++ +++.|.. . .++.+.+||.. +.+.+..+... + .
T Consensus 85 -------------------------~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~-t~~~~~ti~~~-----~-e-- 128 (262)
T 3nol_A 85 -------------------------KRYFGEGISD--WKDKIVGLTWKNGLGFVWNIR-NLRQVRSFNYD-----G-E-- 128 (262)
T ss_dssp -------------------------TTCCEEEEEE--ETTEEEEEESSSSEEEEEETT-TCCEEEEEECS-----S-C--
T ss_pred -------------------------CccceeEEEE--eCCEEEEEEeeCCEEEEEECc-cCcEEEEEECC-----C-C--
Confidence 0001112333 3444544 4 79999999998 77777775432 1 1
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-C
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M 348 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~ 348 (409)
...+++++ ..|+....++.|.++|..+.+.. ..+.. .... ..-..++.+.|. +|+..+..-. +
T Consensus 129 --G~glt~dg-~~L~~SdGs~~i~~iDp~T~~v~----~~I~V-~~~g-------~~~~~lNELe~~-~G~lyan~w~~~ 192 (262)
T 3nol_A 129 --GWGLTHND-QYLIMSDGTPVLRFLDPESLTPV----RTITV-TAHG-------EELPELNELEWV-DGEIFANVWQTN 192 (262)
T ss_dssp --CCCEEECS-SCEEECCSSSEEEEECTTTCSEE----EEEEC-EETT-------EECCCEEEEEEE-TTEEEEEETTSS
T ss_pred --ceEEecCC-CEEEEECCCCeEEEEcCCCCeEE----EEEEe-ccCC-------ccccccceeEEE-CCEEEEEEccCC
Confidence 12333566 55555555788999999886642 22221 0000 001234557776 6765544433 9
Q ss_pred eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 349 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 349 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
.|.+.|..+ ++.+..+....-... .......... ...+||+|+++.|...+
T Consensus 193 ~I~vIDp~t-G~V~~~Id~~~L~~~-~~~~~~~~~v--lNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 193 KIVRIDPET-GKVTGIIDLNGILAE-AGPLPSPIDV--LNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEECTTT-CBEEEEEECTTGGGG-SCSCCSSCCC--EEEEEEETTTTEEEEEE
T ss_pred eEEEEECCC-CcEEEEEECCcCccc-cccccCcCCc--eEEEEEcCCCCEEEEEC
Confidence 999999987 888888875321100 0000000011 15899999987766554
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.61 E-value=4.5e-05 Score=73.46 Aligned_cols=165 Identities=10% Similarity=-0.014 Sum_probs=90.1
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeeeeccC-CCcccccccccccccCceeccCCCCCceeeccc---ccccceeEEEecC
Q 015290 127 GSMFILSTNDKTIKLWKVRDQKVKKIKEMD-HFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE---WTENMATKIANVG 202 (409)
Q Consensus 127 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~ 202 (409)
+..+++++.|+.|..+|..+++........ .......+. ...+. . .+.++.... ...++.+..+|.+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~-----~sP~v---~-~g~v~vg~~~~~~~~~g~v~a~D~~ 191 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTIT-----GAPRV---V-NGKVVIGNGGAEFGVRGYVTAYDAE 191 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCC-----SCCEE---E-TTEEEECCBCTTTCCBCEEEEEETT
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCcccc-----CCcEE---E-CCEEEEEeCCCccCCCCEEEEEECC
Confidence 458888899999999999999988766542 110000000 00000 0 111111111 1135678888877
Q ss_pred Ccccceeeeeecc---------------------------ccccceeEEEeCCCCCeEEEe-cCC---------------
Q 015290 203 NSVHARCQKVYPH---------------------------AHDFNINSISNNSDCETFVSA-DDL--------------- 239 (409)
Q Consensus 203 ~~~~~~~~~~~~~---------------------------~~~~~v~~l~~~~~~~~l~~~-~d~--------------- 239 (409)
+............ +.......++++|+...++.+ .++
T Consensus 192 tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~ 271 (689)
T 1yiq_A 192 TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDN 271 (689)
T ss_dssp TCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCC
T ss_pred CCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCc
Confidence 6432221111000 011111357888888888888 665
Q ss_pred ----eEEEEEccCCCceeeeeecCCCcCcC--ccCceEEEEEeCCCCC---EEEEEeCCCeEEEEeCCCccc
Q 015290 240 ----RINLWNLEISDQCFNIVDMKPSNMDD--LTEVITSAEFHPIYCN---LLAYSSSRGFVRLVDMRQSAL 302 (409)
Q Consensus 240 ----~i~lwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~---~l~s~s~dg~i~iwd~~~~~~ 302 (409)
.|..+|.. +++.+..+.......-. ....+.......+| + .++.++.+|.++++|.+++++
T Consensus 272 ~y~~~v~AlD~~-TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G-~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 272 LFLSSIVAVNAD-TGEYVWHYQTTPGDAWDYTATQHMILAELPIDG-KPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp TTTTEEEEEETT-TCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT-EEEEEEEECCTTSEEEEEETTTCCE
T ss_pred eeeeeEEEEEcc-CCceeEeeecCCcccccccCCCCcEEEeeccCC-cEEEEEEEECCCCeEEEEECCCCCE
Confidence 38999998 67666554322110000 11222222333355 4 788999999999999999875
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.61 E-value=1e-05 Score=71.94 Aligned_cols=117 Identities=11% Similarity=0.119 Sum_probs=63.1
Q ss_pred EeCCCCCeEEEe-c------CCeEEEEEccCCCc--eeeeeecCCCcCcC-----------ccCceEEEEEeCCCCCEEE
Q 015290 225 SNNSDCETFVSA-D------DLRINLWNLEISDQ--CFNIVDMKPSNMDD-----------LTEVITSAEFHPIYCNLLA 284 (409)
Q Consensus 225 ~~~~~~~~l~~~-~------d~~i~lwd~~~~~~--~~~~~~~~~~~~~~-----------~~~~v~~~~~~p~~~~~l~ 284 (409)
+|+|++++++.+ . +++|.+|... .+. ..+++++......+ -......+.++||| ++|.
T Consensus 259 ~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d-~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG-rfLY 336 (462)
T 2ece_A 259 LHDPTKLMGFINMVVSLKDLSSSIWLWFYE-DGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD-KFLY 336 (462)
T ss_dssp CSSTTCCEEEEEEEEETTTCCEEEEEEEEE-TTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS-CEEE
T ss_pred eECCCCCEEEEEEeeeccCCCceEEEEEec-CCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC-CEEE
Confidence 449999988876 5 4577777665 232 12223222211111 02457889999999 7666
Q ss_pred EEe-CCCeEEEEeCCCccccccccccccccccccCCc-ccccc--cccceeeeEeccCCCEEEEee
Q 015290 285 YSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSK-SFFTE--IIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 285 s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~i~~~~~s~~g~~l~sg~ 346 (409)
.+. ..+.|.+||+..... .+....... .+...+ ....+ -......++++|||++|+++.
T Consensus 337 VSnrg~d~VavfdV~d~~~-~~lv~~I~t--GG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 337 LSLWGIGEVRQYDISNPFK-PVLTGKVKL--GGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEETTTTEEEEEECSSTTS-CEEEEEEEC--BTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCCCEEEEEEecCCCC-cEEEEEEEe--CCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 655 468999999864311 111111111 000000 00000 012357899999999998876
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.60 E-value=2.1e-05 Score=64.63 Aligned_cols=194 Identities=8% Similarity=0.100 Sum_probs=116.5
Q ss_pred CcEEEEEECCCCCEEEEEecCC--eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGG--RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
.....+.|+ ++.++.+.+.+| .|+++|+.+++. +..+.-.
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv---------------------------~~~~~l~---------- 84 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT---------------------------LQQIELG---------- 84 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE---------------------------EEEEECC----------
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE---------------------------EEEEecC----------
Confidence 345788998 677777777776 899999998874 2222211
Q ss_pred eeccceE--EEEEEecCCCCEEE-EEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 111 EIEEKIN--RVRWCAAPNGSMFI-LSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 111 ~~~~~v~--~l~~~~s~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
.... .++. ++..|. +.-.++.+.++|..+.+....+..
T Consensus 85 ---~~~FgeGit~----~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~-------------------------------- 125 (262)
T 3nol_A 85 ---KRYFGEGISD----WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNY-------------------------------- 125 (262)
T ss_dssp ---TTCCEEEEEE----ETTEEEEEESSSSEEEEEETTTCCEEEEEEC--------------------------------
T ss_pred ---CccceeEEEE----eCCEEEEEEeeCCEEEEEECccCcEEEEEEC--------------------------------
Confidence 2232 3444 333444 445688999999988876654331
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
.++ + ..+ +++++.|+.+ .++.|.++|.. +.+.+..+.+. ..+.
T Consensus 126 ---------------------------~~e-G--~gl--t~dg~~L~~SdGs~~i~~iDp~-T~~v~~~I~V~---~~g~ 169 (262)
T 3nol_A 126 ---------------------------DGE-G--WGL--THNDQYLIMSDGTPVLRFLDPE-SLTPVRTITVT---AHGE 169 (262)
T ss_dssp ---------------------------SSC-C--CCE--EECSSCEEECCSSSEEEEECTT-TCSEEEEEECE---ETTE
T ss_pred ---------------------------CCC-c--eEE--ecCCCEEEEECCCCeEEEEcCC-CCeEEEEEEec---cCCc
Confidence 111 1 223 3567788887 78889999998 56666654332 1111
Q ss_pred c-CceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 267 T-EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 267 ~-~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
. ..++.+.|. +| .+++..-.++.|.+.|.++++.. ..+....-.+.... ...-....+.++|+|+++.|...
T Consensus 170 ~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~V~----~~Id~~~L~~~~~~-~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 170 ELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGKVT----GIIDLNGILAEAGP-LPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp ECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCBEE----EEEECTTGGGGSCS-CCSSCCCEEEEEEETTTTEEEEE
T ss_pred cccccceeEEE-CC-EEEEEEccCCeEEEEECCCCcEE----EEEECCcCcccccc-ccCcCCceEEEEEcCCCCEEEEE
Confidence 1 345667887 67 77766667889999999998752 22222000000000 00112467899999988766655
Q ss_pred e
Q 015290 346 D 346 (409)
Q Consensus 346 ~ 346 (409)
+
T Consensus 243 G 243 (262)
T 3nol_A 243 G 243 (262)
T ss_dssp E
T ss_pred C
Confidence 4
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.57 E-value=3.6e-05 Score=73.93 Aligned_cols=166 Identities=7% Similarity=-0.112 Sum_probs=90.2
Q ss_pred CCCEEEEEeCCCeEEEEEcCCceeeeeeccC-CCcccccccccccccCceeccCCCCCceeecccc----cccceeEEEe
Q 015290 126 NGSMFILSTNDKTIKLWKVRDQKVKKIKEMD-HFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW----TENMATKIAN 200 (409)
Q Consensus 126 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~ 200 (409)
++..++.++.|+.+..+|..+++........ .......+ ....+. . .+. ++.+.. ..++.|+.+|
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~-----~~~p~v---~-~~~-v~v~~~~~~~~~~g~v~a~D 196 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTI-----TGAPRV---F-KGK-VIIGNGGAEYGVRGYITAYD 196 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBC-----CSCCEE---E-TTE-EEECCBCTTTCCBCEEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCccc-----ccCcEE---E-CCE-EEEEecccccCCCCEEEEEE
Confidence 3558888899999999999999988776543 10000000 000000 0 111 111111 1256788888
Q ss_pred cCCcccceeeeeecc----------------------------ccccceeEEEeCCCCCeEEEe-cCC------------
Q 015290 201 VGNSVHARCQKVYPH----------------------------AHDFNINSISNNSDCETFVSA-DDL------------ 239 (409)
Q Consensus 201 ~~~~~~~~~~~~~~~----------------------------~~~~~v~~l~~~~~~~~l~~~-~d~------------ 239 (409)
..+..........-. +.......++++|++..++.+ .++
T Consensus 197 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~ 276 (677)
T 1kb0_A 197 AETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKG 276 (677)
T ss_dssp TTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTC
T ss_pred CCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccC
Confidence 766432221111000 111112357888888888877 553
Q ss_pred -------eEEEEEccCCCceeeeeecCCCcCc--CccCceEEEEEeCCCC--CEEEEEeCCCeEEEEeCCCccc
Q 015290 240 -------RINLWNLEISDQCFNIVDMKPSNMD--DLTEVITSAEFHPIYC--NLLAYSSSRGFVRLVDMRQSAL 302 (409)
Q Consensus 240 -------~i~lwd~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~--~~l~s~s~dg~i~iwd~~~~~~ 302 (409)
.|..+|.. +++.+..+.......- .......-+....+|. ..++.++.+|.++++|.+++++
T Consensus 277 gd~~~~~sv~AlD~~-TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~ 349 (677)
T 1kb0_A 277 GDNLYLASIVALDPD-TGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF 349 (677)
T ss_dssp CCCTTTTEEEEECTT-TCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCeeeEEEEEEECC-CCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE
Confidence 48889988 6666655432211000 0012223334444552 4788899999999999999875
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.54 E-value=3e-05 Score=63.80 Aligned_cols=197 Identities=9% Similarity=0.024 Sum_probs=114.4
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 193 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (409)
.-...|.| + ++.++++.+.++.|+.+|+.+++..... ..
T Consensus 55 ~ftqGL~~--~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~------------------------------------- 93 (268)
T 3nok_A 55 AFTQGLVF--H-QGHFFESTGHQGTLRQLSLESAQPVWME-RL------------------------------------- 93 (268)
T ss_dssp CCEEEEEE--E-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-------------------------------------
T ss_pred cccceEEE--E-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-------------------------------------
Confidence 34578888 3 4666777788899999999998765542 11
Q ss_pred ceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEE
Q 015290 194 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS 272 (409)
Q Consensus 194 ~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 272 (409)
.. ..--.+++.. ++..+.. .++.+.+||.. +.+.+..+... +. + ..
T Consensus 94 ----------------------~~-~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~-Tl~~~~ti~~~-----~e-G--wG 140 (268)
T 3nok_A 94 ----------------------GN-IFAEGLASDG-ERLYQLTWTEGLLFTWSGM-PPQRERTTRYS-----GE-G--WG 140 (268)
T ss_dssp ----------------------TT-CCEEEEEECS-SCEEEEESSSCEEEEEETT-TTEEEEEEECS-----SC-C--CC
T ss_pred ----------------------CC-cceeEEEEeC-CEEEEEEccCCEEEEEECC-cCcEEEEEeCC-----Cc-e--eE
Confidence 00 0012244432 2333344 89999999998 77777775432 11 1 23
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEE
Q 015290 273 AEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLK 351 (409)
Q Consensus 273 ~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~ 351 (409)
++ +++ +.|+.+..++.|.++|..+.+.. ..+.. ...+ ..-..++.+.|. +|+..+..-. +.|.
T Consensus 141 Lt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~----~~I~V-~~~g-------~~v~~lNeLe~~-dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 141 LC--YWN-GKLVRSDGGTMLTFHEPDGFALV----GAVQV-KLRG-------QPVELINELECA-NGVIYANIWHSSDVL 204 (268)
T ss_dssp EE--EET-TEEEEECSSSEEEEECTTTCCEE----EEEEC-EETT-------EECCCEEEEEEE-TTEEEEEETTCSEEE
T ss_pred Ee--cCC-CEEEEECCCCEEEEEcCCCCeEE----EEEEe-CCCC-------cccccccccEEe-CCEEEEEECCCCeEE
Confidence 44 556 66666666889999999887642 22222 0000 001235667777 7765544434 8999
Q ss_pred EEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcc
Q 015290 352 LWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 352 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
+-|..+ ++.+..+....-...........+... ..+||+|+++.|...+
T Consensus 205 vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vl--NGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 205 EIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVL--NGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCE--EEEEECTTTCCEEEEE
T ss_pred EEeCCC-CcEEEEEECCCCcccccccccCcCCce--EEEEEcCCCCEEEEeC
Confidence 999986 888888875421000000000001111 5899999876555443
No 244
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.52 E-value=0.0002 Score=59.21 Aligned_cols=208 Identities=11% Similarity=0.145 Sum_probs=118.0
Q ss_pred cceEEEEEEecCCCCEE-EEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccc
Q 015290 114 EKINRVRWCAAPNGSMF-ILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 192 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (409)
+.+..++| +|++..| ++...++.|...|.. ++.......
T Consensus 27 ~~lSGla~--~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l------------------------------------- 66 (255)
T 3qqz_A 27 NNISSLTW--SAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL------------------------------------- 66 (255)
T ss_dssp SCEEEEEE--ETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-------------------------------------
T ss_pred cCcceeEE--eCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-------------------------------------
Confidence 67999999 5665555 456778888888887 554433210
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCc--eeeeeecCCCcCcCccCc
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ--CFNIVDMKPSNMDDLTEV 269 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~--~~~~~~~~~~~~~~~~~~ 269 (409)
.+ ....-.+++.+++.++++. .++.+.++++...+. .......+.. .......
T Consensus 67 ----------------------~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~-~~~~N~g 122 (255)
T 3qqz_A 67 ----------------------DF-VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQ-ESPTNCG 122 (255)
T ss_dssp ----------------------SS-CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCS-SCCCSSC
T ss_pred ----------------------CC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccc-cccccCC
Confidence 11 1345678888888877777 788999999874443 2233222110 1223456
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-
Q 015290 270 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y- 347 (409)
Q Consensus 270 v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~- 347 (409)
...++|+|.+ +.|.++.......+|.++ +................. ..+...+.+++++|....|..-+ .
T Consensus 123 ~EGLA~d~~~-~~L~va~E~~p~~i~~~~-g~~~~~~l~i~~~~~~~~------~~~~~d~S~l~~dp~tg~lliLS~~s 194 (255)
T 3qqz_A 123 FEGLAYSRQD-HTFWFFKEKNPIEVYKVN-GLLSSNELHISKDKALQR------QFTLDDVSGAEFNQQKNTLLVLSHES 194 (255)
T ss_dssp CEEEEEETTT-TEEEEEEESSSEEEEEEE-STTCSSCCEEEECHHHHH------TCCSSCCCEEEEETTTTEEEEEETTT
T ss_pred cceEEEeCCC-CEEEEEECcCCceEEEEc-ccccCCceeeecchhhcc------ccccCCceeEEEcCCCCeEEEEECCC
Confidence 7999999998 666666655444555543 111100011111000000 00123578999999865555544 4
Q ss_pred CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEE
Q 015290 348 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT 401 (409)
Q Consensus 348 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 401 (409)
..|..+|.+ ++.+..+.-..+.-. + ...+-..-.++|.++|+..++
T Consensus 195 ~~L~~~d~~--g~~~~~~~L~~g~~~----l--~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 195 RALQEVTLV--GEVIGEMSLTKGSRG----L--SHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp TEEEEECTT--CCEEEEEECSTTGGG----C--SSCCCSEEEEEECTTCCEEEE
T ss_pred CeEEEEcCC--CCEEEEEEcCCccCC----c--ccccCCCCeeEECCCCCEEEE
Confidence 899999976 677666654322100 0 000111148999999985555
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.52 E-value=5.9e-05 Score=61.43 Aligned_cols=209 Identities=8% Similarity=0.084 Sum_probs=118.7
Q ss_pred ceeeeeeecCCCccccccccceeccceEEEEEEecCCCCEEEEEeCCC--eEEEEEcCCceeeeeeccCCCccccccccc
Q 015290 90 EYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDK--TIKLWKVRDQKVKKIKEMDHFPFVSSENTL 167 (409)
Q Consensus 90 ~~~~~~~~~~h~~~~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 167 (409)
.++.+.++ .|... .-...+.| +. +.++.+.+.+| .|+.+|+.+++.........
T Consensus 8 ~~~v~~~~-phd~~----------~ftqGL~~--~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~---------- 63 (243)
T 3mbr_X 8 GYRVVKRY-PHDTT----------AFTEGLFY--LR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP---------- 63 (243)
T ss_dssp CEEEEEEE-ECCTT----------CCEEEEEE--ET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT----------
T ss_pred ceEEEEEc-CCCCc----------cccccEEE--EC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC----------
Confidence 34556666 45432 55778999 33 55556666654 89999999998766533211
Q ss_pred ccccCceeccCCCCCceeecccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEE-Ee-cCCeEEEEE
Q 015290 168 LAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFV-SA-DDLRINLWN 245 (409)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~-~d~~i~lwd 245 (409)
+ ..--.+++. ++.|. .. .++.+.+||
T Consensus 64 -------------------------------------------------~-~fgeGi~~~--~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 64 -------------------------------------------------P-YFGAGIVAW--RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp -------------------------------------------------T-CCEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred -------------------------------------------------C-cceeEEEEe--CCEEEEEEeeCCEEEEEE
Confidence 0 001123333 34444 44 899999999
Q ss_pred ccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccc
Q 015290 246 LEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTE 325 (409)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (409)
.. +.+.+..+... + .+ ..++ +++ ..|+.+..++.|.++|..+.+.. ..+.. ...+.
T Consensus 92 ~~-tl~~~~ti~~~-----~-~G--wglt--~dg-~~L~vSdgs~~l~~iDp~t~~~~----~~I~V-~~~g~------- 147 (243)
T 3mbr_X 92 LA-TLTPRARFRYP-----G-EG--WALT--SDD-SHLYMSDGTAVIRKLDPDTLQQV----GSIKV-TAGGR------- 147 (243)
T ss_dssp TT-TTEEEEEEECS-----S-CC--CEEE--ECS-SCEEEECSSSEEEEECTTTCCEE----EEEEC-EETTE-------
T ss_pred CC-cCcEEEEEeCC-----C-Cc--eEEe--eCC-CEEEEECCCCeEEEEeCCCCeEE----EEEEE-ccCCc-------
Confidence 98 77777775432 1 11 3444 556 44554456889999999886542 22222 00000
Q ss_pred cccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcccccccc-cCCCCccceeeEEEcCCCCeEEEcc
Q 015290 326 IIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDL-YNNDSIFDKFECSVSGDGLHFATGS 403 (409)
Q Consensus 326 ~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~spdg~~l~s~s 403 (409)
.-..++.+.+. +|+..+..-. ..|.+.|..+ ++.+..+....-... .... ....... ..+|++|+++.|...+
T Consensus 148 ~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~-~~~~~~~~~~vl--NGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 148 PLDNLNELEWV-NGELLANVWLTSRIARIDPAS-GKVVAWIDLQALVPD-ADALTDSTNDVL--NGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT-CBEEEEEECGGGSTT-TTSCCCTTSSCE--EEEEEETTTTEEEEEE
T ss_pred ccccceeeEEe-CCEEEEEECCCCeEEEEECCC-CCEEEEEECCcCccc-cccccCCcCCce--EEEEEcCCCCEEEEEC
Confidence 01234556665 6665544433 8999999987 888888874421100 0000 0001111 5899999877665543
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.46 E-value=5.8e-05 Score=62.07 Aligned_cols=196 Identities=9% Similarity=0.059 Sum_probs=117.8
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeee-ecCCCccccccccce
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTE-FQSHEPEFDYLKSLE 111 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~~~~~~~~~ 111 (409)
.....+.|+ ++.++.+.+.+|.|+++|+++++.. .. +...
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~---------------------------~~~l~~~----------- 95 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPV---------------------------WMERLGN----------- 95 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCS---------------------------EEEECTT-----------
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEE---------------------------eEECCCC-----------
Confidence 345688887 4667777888899999999998852 11 2111
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
.--..++. ..++..++.-.++.+.++|..+.+....+..
T Consensus 96 --~FgeGit~---~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~------------------------------------ 134 (268)
T 3nok_A 96 --IFAEGLAS---DGERLYQLTWTEGLLFTWSGMPPQRERTTRY------------------------------------ 134 (268)
T ss_dssp --CCEEEEEE---CSSCEEEEESSSCEEEEEETTTTEEEEEEEC------------------------------------
T ss_pred --cceeEEEE---eCCEEEEEEccCCEEEEEECCcCcEEEEEeC------------------------------------
Confidence 11123555 2344555556788999999998877655431
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCce
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 270 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 270 (409)
.++ + ..++ ++++.|+.+ .++.|.++|.. +.+.+..+.+.. -...-..+
T Consensus 135 -----------------------~~e-G--wGLt--~Dg~~L~vSdGs~~l~~iDp~-T~~v~~~I~V~~--~g~~v~~l 183 (268)
T 3nok_A 135 -----------------------SGE-G--WGLC--YWNGKLVRSDGGTMLTFHEPD-GFALVGAVQVKL--RGQPVELI 183 (268)
T ss_dssp -----------------------SSC-C--CCEE--EETTEEEEECSSSEEEEECTT-TCCEEEEEECEE--TTEECCCE
T ss_pred -----------------------CCc-e--eEEe--cCCCEEEEECCCCEEEEEcCC-CCeEEEEEEeCC--CCcccccc
Confidence 111 1 2333 567888888 78999999988 666666553321 01112345
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCC-EEEEe
Q 015290 271 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLLSR 345 (409)
Q Consensus 271 ~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~sg 345 (409)
+.+.|. +| .+++..-.++.|.+.|.++++.. ..+....-.+........-....+.++++|+++ +++||
T Consensus 184 NeLe~~-dG-~lyanvw~s~~I~vIDp~TG~V~----~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 184 NELECA-NG-VIYANIWHSSDVLEIDPATGTVV----GVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEE-TT-EEEEEETTCSEEEEECTTTCBEE----EEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccEEe-CC-EEEEEECCCCeEEEEeCCCCcEE----EEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 778887 66 76766667889999999998752 222220000000000001124678999999865 55555
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.41 E-value=5e-05 Score=66.00 Aligned_cols=162 Identities=9% Similarity=-0.044 Sum_probs=91.7
Q ss_pred cceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEE
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS 272 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 272 (409)
++.+..+|.+ . +....+ ......+.++...+++..++.. +.+..+| . .+...... ......+.+
T Consensus 156 ~~~l~~~d~~-g---~~~~~~-~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~-~g~~~~~~-------~~~~~~~~~ 219 (330)
T 3hxj_A 156 DNYLYAINPD-G---TEKWRF-KTNDAITSAASIGKDGTIYFGS--DKVYAIN-P-DGTEKWNF-------YAGYWTVTR 219 (330)
T ss_dssp TSEEEEECTT-S---CEEEEE-ECSSCCCSCCEECTTCCEEEES--SSEEEEC-T-TSCEEEEE-------CCSSCCCSC
T ss_pred CCEEEEECCC-C---CEeEEE-ecCCCceeeeEEcCCCEEEEEe--CEEEEEC-C-CCcEEEEE-------ccCCcceec
Confidence 4566666664 1 222222 2233456667777777755555 8889999 4 45444332 222345778
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEE
Q 015290 273 AEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKL 352 (409)
Q Consensus 273 ~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~i 352 (409)
+..+++| .+ ..++.++.|..+|... +.. ..+.. . ...+..+.+.+++.+.+...++.|..
T Consensus 220 ~~~~~~g-~l-~v~t~~~gl~~~~~~g-~~~----~~~~~---~----------~~~~~~~~~~~~g~l~v~t~~ggl~~ 279 (330)
T 3hxj_A 220 PAISEDG-TI-YVTSLDGHLYAINPDG-TEK----WRFKT---G----------KRIESSPVIGNTDTIYFGSYDGHLYA 279 (330)
T ss_dssp CEECTTS-CE-EEEETTTEEEEECTTS-CEE----EEEEC---S----------SCCCSCCEECTTSCEEEECTTCEEEE
T ss_pred eEECCCC-eE-EEEcCCCeEEEECCCC-CEe----EEeeC---C----------CCccccceEcCCCeEEEecCCCCEEE
Confidence 8888887 54 4456677888887533 221 11111 0 12234456666675554444588999
Q ss_pred EEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 353 WDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 353 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
+|. + ++.+..+......+ .++...++|++. .++.+|.+
T Consensus 280 ~d~-~-g~~~~~~~~~~~~~---------------~~~~~d~~g~l~-~gt~~G~~ 317 (330)
T 3hxj_A 280 INP-D-GTEKWNFETGSWII---------------ATPVIDENGTIY-FGTRNGKF 317 (330)
T ss_dssp ECT-T-SCEEEEEECSSCCC---------------SCCEECTTCCEE-EECTTSCE
T ss_pred ECC-C-CcEEEEEEcCCccc---------------cceEEcCCCEEE-EEcCCCeE
Confidence 996 3 66666665433322 467777888654 56667654
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.35 E-value=0.00022 Score=63.29 Aligned_cols=194 Identities=10% Similarity=0.005 Sum_probs=101.4
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecCCccc
Q 015290 127 GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVH 206 (409)
Q Consensus 127 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 206 (409)
+..++.++.++.|..+|..+++............ .. ......... . ..++.+. .++.+..+|..+..
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~--~~---~~~~~~~~~----~-~~v~~g~--~~g~l~~~d~~tG~- 209 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL--SL---RGESAPTTA----F-GAAVVGG--DNGRVSAVLMEQGQ- 209 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC----------CCCCCCEEE----T-TEEEECC--TTTEEEEEETTTCC-
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce--ee---cCCCCcEEE----C-CEEEEEc--CCCEEEEEECCCCc-
Confidence 3478888889999999999998776654321110 00 000000000 0 1122221 25567777765532
Q ss_pred ceeeeeeccccc-c-----ceeEEEeCC--CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeC
Q 015290 207 ARCQKVYPHAHD-F-----NINSISNNS--DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHP 277 (409)
Q Consensus 207 ~~~~~~~~~~~~-~-----~v~~l~~~~--~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 277 (409)
.+..+..... . .+..+...| .+..++.+ .++.+..+|.. +++.+.... ......+...
T Consensus 210 --~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~-tG~~~w~~~---------~~~~~~~~~~- 276 (376)
T 3q7m_A 210 --MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLR-SGQIMWKRE---------LGSVNDFIVD- 276 (376)
T ss_dssp --EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETT-TCCEEEEEC---------CCCEEEEEEE-
T ss_pred --EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECC-CCcEEeecc---------CCCCCCceEE-
Confidence 2211100000 0 000011111 24566666 88999999998 565554321 1123344443
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEcc
Q 015290 278 IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIR 356 (409)
Q Consensus 278 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~ 356 (409)
+ ..++.++.++.|..+|..+++.. +.. .... ...+...... +..|+.++ ++.|.++|..
T Consensus 277 -~-~~l~~~~~~g~l~~~d~~tG~~~------w~~-~~~~---------~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~ 336 (376)
T 3q7m_A 277 -G-NRIYLVDQNDRVMALTIDGGVTL------WTQ-SDLL---------HRLLTSPVLY--NGNLVVGDSEGYLHWINVE 336 (376)
T ss_dssp -T-TEEEEEETTCCEEEEETTTCCEE------EEE-CTTT---------TSCCCCCEEE--TTEEEEECTTSEEEEEETT
T ss_pred -C-CEEEEEcCCCeEEEEECCCCcEE------Eee-cccC---------CCcccCCEEE--CCEEEEEeCCCeEEEEECC
Confidence 4 56777788999999999988642 222 0000 0112222222 45666666 4999999998
Q ss_pred CCCcceEEEec
Q 015290 357 MDSTPVATFKI 367 (409)
Q Consensus 357 ~~~~~~~~~~~ 367 (409)
+ ++.+..+..
T Consensus 337 t-G~~~~~~~~ 346 (376)
T 3q7m_A 337 D-GRFVAQQKV 346 (376)
T ss_dssp T-CCEEEEEEC
T ss_pred C-CcEEEEEec
Confidence 6 787777665
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.35 E-value=0.00062 Score=56.22 Aligned_cols=218 Identities=11% Similarity=0.143 Sum_probs=122.3
Q ss_pred CcEEEEEECCCCCE-EEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeee--cCCCcccccccc
Q 015290 33 DIVSAIEFDKTGDY-LAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEF--QSHEPEFDYLKS 109 (409)
Q Consensus 33 ~~v~~v~~~~~~~~-la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~~~~~~~ 109 (409)
+.+..++|+|++.. +++...++.|...|.. ++. ...+ .+.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v---------------------------~~~i~l~g~--------- 69 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL---------------------------IRTIPLDFV--------- 69 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE---------------------------EEEEECSSC---------
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE---------------------------EEEEecCCC---------
Confidence 46999999997654 4556677888888877 432 2222 222
Q ss_pred ceeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 110 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 110 ~~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
...-.|++ .+++.++++.-.++.+.++++..........
T Consensus 70 ----~D~EGIa~--~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~----------------------------------- 108 (255)
T 3qqz_A 70 ----KDLETIEY--IGDNQFVISDERDYAIYVISLTPNSEVKILK----------------------------------- 108 (255)
T ss_dssp ----SSEEEEEE--CSTTEEEEEETTTTEEEEEEECTTCCEEEEE-----------------------------------
T ss_pred ----CChHHeEE--eCCCEEEEEECCCCcEEEEEcCCCCeeeeee-----------------------------------
Confidence 35677888 5777766776677888888876543211100
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEcc--CCCceeeeeecCCCcCcCc
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLE--ISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~--~~~~~~~~~~~~~~~~~~~ 266 (409)
...+ ... ..........|+|+|.++.|.++ ......+|.+. .....+.....+...-..+
T Consensus 109 --------~~~~-------~~~--~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 109 --------KIKI-------PLQ--ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp --------EEEC-------CCS--SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred --------eecc-------ccc--cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc
Confidence 0000 000 01234457889999999878777 54444555553 1111222221100000112
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
...+.+++++|...++++.....+.|.++|.... . ...+.. ..+ ...+..--.....++|.++|++.++ +
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~----~~~~~L-~~g---~~~l~~~~~qpEGia~d~~G~lyIv-s 241 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-V----IGEMSL-TKG---SRGLSHNIKQAEGVAMDASGNIYIV-S 241 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-E----EEEEEC-STT---GGGCSSCCCSEEEEEECTTCCEEEE-E
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-E----EEEEEc-CCc---cCCcccccCCCCeeEECCCCCEEEE-c
Confidence 3356899999987567777777888999997653 2 122222 000 0000000135678999999985555 5
Q ss_pred c-CeEEEEEc
Q 015290 347 Y-MNLKLWDI 355 (409)
Q Consensus 347 ~-~~v~iwd~ 355 (409)
+ +.++.+.-
T Consensus 242 E~n~~y~f~~ 251 (255)
T 3qqz_A 242 EPNRFYRFTP 251 (255)
T ss_dssp TTTEEEEEEC
T ss_pred CCceEEEEEe
Confidence 5 76666653
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.34 E-value=0.00042 Score=56.47 Aligned_cols=198 Identities=9% Similarity=0.047 Sum_probs=116.1
Q ss_pred CCcEEEEEECCCCCEEEEEecCC--eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccc
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGG--RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKS 109 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 109 (409)
......+.|++ +.++.+.+.+| .|+.+|+.+++. +....-.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv---------------------------~~~~~l~--------- 62 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI---------------------------LQRAEVP--------- 62 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE---------------------------EEEEECC---------
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCE---------------------------EEEEeCC---------
Confidence 34577899986 56666666654 899999998874 2222111
Q ss_pred ceeccce--EEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeec
Q 015290 110 LEIEEKI--NRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 187 (409)
Q Consensus 110 ~~~~~~v--~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
... -.++. .+++..+..-.++.+.++|..+.+....+..
T Consensus 63 ----~~~fgeGi~~---~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~-------------------------------- 103 (243)
T 3mbr_X 63 ----PPYFGAGIVA---WRDRLIQLTWRNHEGFVYDLATLTPRARFRY-------------------------------- 103 (243)
T ss_dssp ----TTCCEEEEEE---ETTEEEEEESSSSEEEEEETTTTEEEEEEEC--------------------------------
T ss_pred ----CCcceeEEEE---eCCEEEEEEeeCCEEEEEECCcCcEEEEEeC--------------------------------
Confidence 122 23444 2333444556788999999988876655331
Q ss_pred ccccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 188 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 188 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
.++ + ..++ ++++.|+.+ .++.|.++|.. +.+.+..+.+... ...
T Consensus 104 ---------------------------~~~-G--wglt--~dg~~L~vSdgs~~l~~iDp~-t~~~~~~I~V~~~--g~~ 148 (243)
T 3mbr_X 104 ---------------------------PGE-G--WALT--SDDSHLYMSDGTAVIRKLDPD-TLQQVGSIKVTAG--GRP 148 (243)
T ss_dssp ---------------------------SSC-C--CEEE--ECSSCEEEECSSSEEEEECTT-TCCEEEEEECEET--TEE
T ss_pred ---------------------------CCC-c--eEEe--eCCCEEEEECCCCeEEEEeCC-CCeEEEEEEEccC--Ccc
Confidence 111 1 3343 467778887 88899999998 5666665533210 001
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
-..++.+.+. +| .+++..-.+..|.+.|.++++.. ..+....-.+.....-..-....+.++++|+++.|...+
T Consensus 149 ~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~V~----~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 149 LDNLNELEWV-NG-ELLANVWLTSRIARIDPASGKVV----AWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCBEE----EEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cccceeeEEe-CC-EEEEEECCCCeEEEEECCCCCEE----EEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 1345677776 56 66666656889999999998752 333220000000000001124678999999876555443
No 251
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.33 E-value=0.0004 Score=61.57 Aligned_cols=191 Identities=11% Similarity=0.076 Sum_probs=99.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecCCcc
Q 015290 126 NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSV 205 (409)
Q Consensus 126 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 205 (409)
++..++.++.++.|..+|..+++........... .+. ... . . ..++.+. .++.+..+|..+..
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~--~~~--------p~~---~-~-~~v~v~~--~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA--LSR--------PVV---S-D-GLVLIHT--SNGQLQALNEADGA 164 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCC--CSC--------CEE---E-T-TEEEEEC--TTSEEEEEETTTCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce--EcC--------CEE---E-C-CEEEEEc--CCCeEEEEECCCCc
Confidence 4558888899999999999999887655432110 000 000 0 1 1122222 25677777776532
Q ss_pred cceeeeeeccccccce------eEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCc---e-EEEE
Q 015290 206 HARCQKVYPHAHDFNI------NSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV---I-TSAE 274 (409)
Q Consensus 206 ~~~~~~~~~~~~~~~v------~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~---v-~~~~ 274 (409)
.+..+ ... ..+ ...... +..++.+ .++.+..+|.. +++.+................ + ....
T Consensus 165 ---~~W~~-~~~-~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~ 236 (376)
T 3q7m_A 165 ---VKWTV-NLD-MPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME-QGQMIWQQRISQATGSTEIDRLSDVDTTPV 236 (376)
T ss_dssp ---EEEEE-ECC-C-----CCCCCCEEE--TTEEEECCTTTEEEEEETT-TCCEEEEEECCC-----------CCCCCCE
T ss_pred ---EEEEE-eCC-CCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC-CCcEEEEEecccCCCCcccccccccCCCcE
Confidence 22211 111 111 111111 4467777 89999999998 566554432211000000000 0 0111
Q ss_pred EeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEE
Q 015290 275 FHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLW 353 (409)
Q Consensus 275 ~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iw 353 (409)
.. + ..++.++.++.+..+|.++++.. +.. . ......+... +..|..++ ++.|..+
T Consensus 237 ~~--~-~~v~~~~~~g~l~~~d~~tG~~~------w~~-~------------~~~~~~~~~~--~~~l~~~~~~g~l~~~ 292 (376)
T 3q7m_A 237 VV--N-GVVFALAYNGNLTALDLRSGQIM------WKR-E------------LGSVNDFIVD--GNRIYLVDQNDRVMAL 292 (376)
T ss_dssp EE--T-TEEEEECTTSCEEEEETTTCCEE------EEE-C------------CCCEEEEEEE--TTEEEEEETTCCEEEE
T ss_pred EE--C-CEEEEEecCcEEEEEECCCCcEE------eec-c------------CCCCCCceEE--CCEEEEEcCCCeEEEE
Confidence 11 3 46777788999999999988642 222 0 0112233332 45566555 4899999
Q ss_pred EccCCCcceEEEe
Q 015290 354 DIRMDSTPVATFK 366 (409)
Q Consensus 354 d~~~~~~~~~~~~ 366 (409)
|..+ ++.+-...
T Consensus 293 d~~t-G~~~w~~~ 304 (376)
T 3q7m_A 293 TIDG-GVTLWTQS 304 (376)
T ss_dssp ETTT-CCEEEEEC
T ss_pred ECCC-CcEEEeec
Confidence 9986 66665554
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.29 E-value=0.00075 Score=65.76 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=25.0
Q ss_pred cEEEEEEC-CCCCEEEEEec-CC----eEEEEeccCC
Q 015290 34 IVSAIEFD-KTGDYLAVGDR-GG----RVILFETVGG 64 (409)
Q Consensus 34 ~v~~v~~~-~~~~~la~~~~-dg----~i~iw~~~~~ 64 (409)
.+...+|| |||++||.+.. +| .|.++|+.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g 211 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDP 211 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCC
Confidence 68889999 99999986643 22 5999999887
No 253
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=0.00067 Score=61.28 Aligned_cols=71 Identities=10% Similarity=0.165 Sum_probs=47.9
Q ss_pred eeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCC-EEEEEeCCCeEEEEeC
Q 015290 221 INSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCN-LLAYSSSRGFVRLVDM 297 (409)
Q Consensus 221 v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~s~dg~i~iwd~ 297 (409)
...++++| ++..+++- .++.|..++.. .+....... .. .......++|+|+| + ++++-...+.|..++.
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~-~~~~~~~~~-----~~-~~~~P~gia~~pdG-~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFT-TQETTPLFT-----IQ-DSGWEFHIQFHPSG-NYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETT-TTEEEEEEE-----CS-SSSCCEEEEECTTS-SEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECC-CCcEEEEEE-----cC-CCCcceeEEEcCCC-CEEEEEECCCCEEEEEeC
Confidence 46788999 66666666 78899999987 443322211 11 12456899999999 7 5555567788999876
Q ss_pred CC
Q 015290 298 RQ 299 (409)
Q Consensus 298 ~~ 299 (409)
..
T Consensus 300 d~ 301 (430)
T 3tc9_A 300 DW 301 (430)
T ss_dssp ET
T ss_pred Cc
Confidence 53
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.26 E-value=0.0018 Score=56.63 Aligned_cols=111 Identities=13% Similarity=0.116 Sum_probs=70.2
Q ss_pred eeEEEeCCCCCeEEE-e-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC-CeEEEEeC
Q 015290 221 INSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-GFVRLVDM 297 (409)
Q Consensus 221 v~~l~~~~~~~~l~~-~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-g~i~iwd~ 297 (409)
...+++.+.+..|+. - ..+.|.+.++. ... ...+ ....-.....++++|.+..++.+-... +.|..+++
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~-~~~l------~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAH-RKVL------LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETT-SCS-CEEE------ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCC-CCc-eEEE------EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 467888876555554 4 67889999987 322 2221 122234568999999662555554445 78888887
Q ss_pred CCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 298 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
..... ..+-. ......+.++++|++..|..+. . +.|..+|+.
T Consensus 190 dG~~~-----~~~~~------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 190 DGSGR-----RIIAD------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp TSCSC-----EESCC------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCc-----EEEEE------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 65321 11111 0023568899999888777765 3 889999986
No 255
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.23 E-value=0.00076 Score=64.71 Aligned_cols=282 Identities=11% Similarity=0.064 Sum_probs=137.4
Q ss_pred EEEECC-CCCEEEEEecCC-----------eEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecC-CCcc
Q 015290 37 AIEFDK-TGDYLAVGDRGG-----------RVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQS-HEPE 103 (409)
Q Consensus 37 ~v~~~~-~~~~la~~~~dg-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~ 103 (409)
++++.+ ++++++.|+.+. .+.+||..+++-. .+..+.. +.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~-------------------------~~~~~~~~~~-- 242 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS-------------------------DRTVTVTKHD-- 242 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBC-------------------------CCEEEECSCC--
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEE-------------------------eCcccCCCCC--
Confidence 556667 888888887543 5788888776531 1111211 11
Q ss_pred ccccccceeccceEEEEEEecCCCCEEEEEe-CCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCC
Q 015290 104 FDYLKSLEIEEKINRVRWCAAPNGSMFILST-NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 182 (409)
Q Consensus 104 ~~~~~~~~~~~~v~~l~~~~s~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (409)
....++++ ..+++.++.|+ .+..+.+||..+++......+.... ....+...+++
T Consensus 243 ----------~~~~~~~~--~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R------------~~~s~~~~~dg 298 (656)
T 1k3i_A 243 ----------MFCPGISM--DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVAR------------GYQSSATMSDG 298 (656)
T ss_dssp ----------CSSCEEEE--CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCC------------SSCEEEECTTS
T ss_pred ----------CccccccC--CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccc------------cccceEEecCC
Confidence 22334566 47898888887 4468999999988766543222111 00111111223
Q ss_pred ceeeccc-cc---ccceeEEEecCCcccceee-----eeeccccccceeEEEeCCCCCeEEEe-cC---------CeEEE
Q 015290 183 AHGYHLE-WT---ENMATKIANVGNSVHARCQ-----KVYPHAHDFNINSISNNSDCETFVSA-DD---------LRINL 243 (409)
Q Consensus 183 ~~~~~~~-~~---~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~v~~l~~~~~~~~l~~~-~d---------~~i~l 243 (409)
.++..|+ .. ....+.+||..+..= ..+ .-.... .. ...+..++..++.| .+ ..+..
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~~t~~W-~~~~~~~~~p~~~~-~~---~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~ 373 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSPSSKTW-TSLPNAKVNPMLTA-DK---QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNW 373 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETTTTEE-EEETTSCSGGGCCC-CT---TGGGTTTCSCCEEECGGGCEEECCSSSEEEE
T ss_pred eEEEEeCcccCCcccccceEeCCCCCcc-eeCCCccccccccc-cc---cceeecCCceEEEECCCCcEEEecCccceee
Confidence 3333333 11 123688888865321 111 000000 00 01122344444444 44 35677
Q ss_pred EEccCCCceeeeeecCCCc--CcCccCceEEEEEeC-CCCCEEEEEeCCC-----------eEEEEeCCCcccccccccc
Q 015290 244 WNLEISDQCFNIVDMKPSN--MDDLTEVITSAEFHP-IYCNLLAYSSSRG-----------FVRLVDMRQSALCDHSARI 309 (409)
Q Consensus 244 wd~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~p-~~~~~l~s~s~dg-----------~i~iwd~~~~~~~~~~~~~ 309 (409)
||.. .............. .......-.++.|.. ++ ++++.|+.++ .+.+||..+.... .
T Consensus 374 yd~~-~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~-----~ 446 (656)
T 1k3i_A 374 YYTS-GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG-KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT-----V 446 (656)
T ss_dssp EECS-TTCEEEEEEECEETTEECCCCBTCEEEEEETTTT-EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE-----E
T ss_pred eecC-CcceeecCCccccccccCCCCCCCceEeccCCCC-eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee-----E
Confidence 8877 33322221111000 000011224555554 55 8888887543 5777777664321 1
Q ss_pred ccccccccCCcccccccccceeeeEeccCCCEEEEee-c-----------CeEEEEEccCCCcceEEEecccCccccccc
Q 015290 310 LRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-----------MNLKLWDIRMDSTPVATFKIHEHLRPKLCD 377 (409)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 377 (409)
... ...+. ...-.+++..|+|++++.|+ + ..+.+||..+ .+ -..+..........
T Consensus 447 ~~~-~~mp~--------~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t-~~-W~~~~~~~~~R~~h-- 513 (656)
T 1k3i_A 447 FAS-NGLYF--------ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ-DT-FYKQNPNSIVRVYH-- 513 (656)
T ss_dssp ECT-TCCSS--------CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG-TE-EEECCCCSSCCCTT--
T ss_pred Ecc-CCCCC--------CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC-Cc-eeecCCCCCccccc--
Confidence 110 00000 11223456678999998875 2 4689999875 32 22222111111000
Q ss_pred ccCCCCccceeeEEEcCCCCeEEEccc
Q 015290 378 LYNNDSIFDKFECSVSGDGLHFATGSY 404 (409)
Q Consensus 378 ~~~~~~~~~v~~~~~spdg~~l~s~s~ 404 (409)
..+.+.|||+.++.|+.
T Consensus 514 ----------s~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 514 ----------SISLLLPDGRVFNGGGG 530 (656)
T ss_dssp ----------EEEEECTTSCEEEEECC
T ss_pred ----------cHhhcCCCcEEEecCCC
Confidence 24556799999999885
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.22 E-value=0.002 Score=55.27 Aligned_cols=154 Identities=11% Similarity=0.102 Sum_probs=79.5
Q ss_pred ceeEEEeCCCCCeEEEe-cCC--eEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 015290 220 NINSISNNSDCETFVSA-DDL--RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 296 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~-~d~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd 296 (409)
.+..+++.++++++++. ... .|..+|.. .+......... .......++..+++ ..+++-..++.|.++|
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~~~~~~~~~------~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d 144 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGTVETLLTLP------DAIFLNGITPLSDT-QYLTADSYRGAIWLID 144 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSCEEEEEECT------TCSCEEEEEESSSS-EEEEEETTTTEEEEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCeEEEEEeCC------CccccCcccccCCC-cEEEEECCCCeEEEEe
Confidence 46789999999866665 332 46666765 44443332211 11223455555655 5555555688899999
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEccCCCcc--eEEEecccCcc
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTP--VATFKIHEHLR 372 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~~~~~~--~~~~~~~~~~~ 372 (409)
...++. ..+....... .....+.-...+.+ +|++++|..+. . +.|..|++...++. ...+.....+
T Consensus 145 ~~~~~~-----~v~~~~~~~~--~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P- 214 (306)
T 2p4o_A 145 VVQPSG-----SIWLEHPMLA--RSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNI- 214 (306)
T ss_dssp TTTTEE-----EEEEECGGGS--CSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCC-
T ss_pred CCCCcE-----eEEEECCccc--cccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCC-
Confidence 765421 1100000000 00000001123344 88888777764 3 89999998632221 1222111111
Q ss_pred cccccccCCCCccceeeEEEcCCCCeEEEcccCC
Q 015290 373 PKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRR 406 (409)
Q Consensus 373 ~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg 406 (409)
..++++++|++.++....+
T Consensus 215 ---------------~gi~vd~dG~l~va~~~~~ 233 (306)
T 2p4o_A 215 ---------------DDFAFDVEGNLYGATHIYN 233 (306)
T ss_dssp ---------------SSEEEBTTCCEEEECBTTC
T ss_pred ---------------CCeEECCCCCEEEEeCCCC
Confidence 3688888887666554443
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.18 E-value=0.0016 Score=58.00 Aligned_cols=111 Identities=13% Similarity=0.119 Sum_probs=68.5
Q ss_pred eeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC-CeEEEEeC
Q 015290 221 INSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-GFVRLVDM 297 (409)
Q Consensus 221 v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-g~i~iwd~ 297 (409)
...+++.+.+..|+.+ ..+.|.+.++. ... ...+ +...-.....++++|.+..++.+-... +.|..+++
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~d-g~~-~~~l------~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAH-RKVL------LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTT-SCS-CEEE------ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCC-CCc-eEEe------ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 3567888765555544 67788888876 222 2221 122234578999998762444444444 77888887
Q ss_pred CCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 298 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
..... ..+.. ......+.++|+|++..|..+. . +.|..+|+.
T Consensus 233 dG~~~-----~~~~~------------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 233 DGSGR-----RIIAD------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp TSCSC-----EEEEC------------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CCCCc-----EEEEE------------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 65321 11111 0023467899999888777764 3 889999986
No 258
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.17 E-value=0.0038 Score=56.37 Aligned_cols=173 Identities=9% Similarity=0.041 Sum_probs=86.7
Q ss_pred eeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCce-eeeeecCCCcCcCccCceEEEEEeCCCCC-EEEEEeCCCeEEEEe
Q 015290 221 INSISNNS-DCETFVSA-DDLRINLWNLEISDQC-FNIVDMKPSNMDDLTEVITSAEFHPIYCN-LLAYSSSRGFVRLVD 296 (409)
Q Consensus 221 v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~s~dg~i~iwd 296 (409)
...++++| ++.++++- .++.|+.+|.. .+.. ...+.. +.......++|+|++ + ++++-...+.|..++
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~-~g~~~~~~~~~------~~~~~~~~ia~dpdG-~~LYvad~~~~~I~~~~ 301 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPA-TGTLTEEEVMM------DTKGSNFHIVWHPTG-DWAYIIYNGKHCIYRVD 301 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTT-TCCEEEEEEEC------SCCSSCEEEEECTTS-SEEEEEETTTTEEEEEE
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECC-CCeEEEEEecc------CCCCCcccEEEeCCC-CEEEEEeCCCCEEEEEe
Confidence 45688999 56655555 78889999886 4443 222111 111233579999999 7 555555678899988
Q ss_pred CCC--ccccccccccccccccccCCcc--cccccccceeeeEe---------ccCCCEEEEeec-CeEEEEEccCCCcce
Q 015290 297 MRQ--SALCDHSARILRDAAESHGSKS--FFTEIIASISDIKF---------ANDGQHLLSRDY-MNLKLWDIRMDSTPV 362 (409)
Q Consensus 297 ~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~---------s~~g~~l~sg~~-~~v~iwd~~~~~~~~ 362 (409)
... +... ....+........... .....-.....+++ .++|.+.++-.. +.|+.++.. +. +
T Consensus 302 ~d~~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~--G~-v 376 (433)
T 4hw6_A 302 YNRETGKLA--VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE--GR-V 376 (433)
T ss_dssp BCTTTCCBC--CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT--SE-E
T ss_pred CCCCCcccC--cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC--CC-E
Confidence 653 2210 0011111000000000 00000123567888 666665555444 889999853 54 3
Q ss_pred EEEecccC---ccccccc-ccCCCCccceeeEEEc-CCCCeEEEcccCCC
Q 015290 363 ATFKIHEH---LRPKLCD-LYNNDSIFDKFECSVS-GDGLHFATGSYRRD 407 (409)
Q Consensus 363 ~~~~~~~~---~~~~~~~-~~~~~~~~~v~~~~~s-pdg~~l~s~s~dg~ 407 (409)
..+-+... .-. ... +-..........++++ ++|.++++-..++.
T Consensus 377 ~t~~G~g~~~~~G~-~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r 425 (433)
T 4hw6_A 377 TTYAGRGNSREWGY-VDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHR 425 (433)
T ss_dssp EEEECCCTTCSSCC-BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred EEEEeCCCCCcccc-CCCccccccEeCCCcEEEEECCCCEEEEEeCCCCE
Confidence 34433211 000 000 0001111224689999 67776666544443
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.11 E-value=0.0089 Score=58.74 Aligned_cols=247 Identities=9% Similarity=0.112 Sum_probs=141.9
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...|.++...++|++|..|+.++-|.+||..+++. ..+...... +
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~----------------------------~~~~~~~~~------l- 449 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV----------------------------ENFNQRNSQ------L- 449 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE----------------------------EEECTTTSC------C-
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE----------------------------EEeecCCCC------c-
Confidence 36799999988888566787777799999876642 111110000 0
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
....|.++.. .++|.+.+ |+.+ -+.+||..+++........ .+
T Consensus 450 ~~~~v~~i~~--d~~g~lwi-gt~~-Gl~~~~~~~~~~~~~~~~~-~~-------------------------------- 492 (795)
T 4a2l_A 450 VNENVYAILP--DGEGNLWL-GTLS-ALVRFNPEQRSFTTIEKEK-DG-------------------------------- 492 (795)
T ss_dssp SCSCEEEEEE--CSSSCEEE-EESS-CEEEEETTTTEEEECCBCT-TC--------------------------------
T ss_pred CCCeeEEEEE--CCCCCEEE-EecC-ceeEEeCCCCeEEEccccc-cc--------------------------------
Confidence 0157888887 67776554 4444 4888898776554321100 00
Q ss_pred ccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceE
Q 015290 192 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 271 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 271 (409)
. .-....|.++...++|...+... +-+..||.. .+.. .+.............|.
T Consensus 493 ----------------~------~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~-~~~~--~~~~~~~~~~l~~~~i~ 546 (795)
T 4a2l_A 493 ----------------T------PVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQE-GLDI--QKASILPVSNVTKLFTN 546 (795)
T ss_dssp ----------------C------BCCCCCEEEEEECTTCCEEEEES-SCEEEEEEE-TTEE--EECCCSCSCGGGGSCEE
T ss_pred ----------------c------ccCCceEEEEEECCCCCEEEEeC-CceEEEeCC-CCeE--EEecCCCCCCCCCCeeE
Confidence 0 11235688888888887555446 568888887 3433 22110000112346789
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEE
Q 015290 272 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLK 351 (409)
Q Consensus 272 ~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~ 351 (409)
++..+++| .+.++.. . -|..||..+++. ..+.. ..+ + ....|.++...++|++.+++ .+.|.
T Consensus 547 ~i~~d~~g-~lWigT~-~-Gl~~~d~~~~~~-----~~~~~-~~g------l--~~~~i~~i~~d~~g~lWi~t-~~Gl~ 608 (795)
T 4a2l_A 547 CIYEASNG-IIWVGTR-E-GFYCFNEKDKQI-----KRYNT-TNG------L--PNNVVYGILEDSFGRLWLST-NRGIS 608 (795)
T ss_dssp EEEECTTS-CEEEEES-S-CEEEEETTTTEE-----EEECG-GGT------C--SCSCEEEEEECTTSCEEEEE-TTEEE
T ss_pred EEEECCCC-CEEEEeC-C-CceeECCCCCcE-----EEeCC-CCC------C--chhheEEEEECCCCCEEEEc-CCceE
Confidence 99999998 7655443 4 478899876542 22221 000 0 02358888899999876666 46678
Q ss_pred EEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCC
Q 015290 352 LWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRR 406 (409)
Q Consensus 352 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg 406 (409)
.||..+ ..+..+....+... ..+...++...++|.+++. +.+|
T Consensus 609 ~~~~~~--~~~~~~~~~dGl~~---------~~f~~~~~~~~~~G~l~~g-~~~G 651 (795)
T 4a2l_A 609 CFNPET--EKFRNFTESDGLQS---------NQFNTASYCRTSVGQMYFG-GING 651 (795)
T ss_dssp EEETTT--TEEEEECGGGTCSC---------SCEEEEEEEECTTSCEEEE-ETTE
T ss_pred EEcCCC--CcEEEcCCcCCCcc---------ccCccCceeECCCCeEEEe-cCCc
Confidence 888763 44556654444321 0111135677788875554 4344
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.09 E-value=0.0015 Score=56.56 Aligned_cols=112 Identities=10% Similarity=-0.003 Sum_probs=65.1
Q ss_pred eeEEEeCCCCCeEEEe--cCCeEEEEEccCCC-ceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC---------
Q 015290 221 INSISNNSDCETFVSA--DDLRINLWNLEISD-QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS--------- 288 (409)
Q Consensus 221 v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~--------- 288 (409)
...++++|+++.|+.+ ..+.|..|++.... .....+ ....+ ...++++++| ++.++...
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~-------~~~~g-P~gi~~d~~G-~l~va~~~~~~~~~~~~ 257 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL-------VKIPN-PGNIKRNADG-HFWVSSSEELDGNMHGR 257 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE-------EECSS-EEEEEECTTS-CEEEEEEEETTSSTTSC
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE-------EeCCC-CCCeEECCCC-CEEEEecCcccccccCC
Confidence 4679999999877665 57899999987211 111221 01112 6789999999 77666544
Q ss_pred -CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEcc
Q 015290 289 -RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIR 356 (409)
Q Consensus 289 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~ 356 (409)
.+.|..+|.. ++. ...+.. ..+. ....+..+++ .++++.++... +.|..+++.
T Consensus 258 ~~~~v~~~d~~-G~~----~~~~~~-~~g~--------~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 258 VDPKGIKFDEF-GNI----LEVIPL-PPPF--------AGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEEEEEECTT-SCE----EEEEEC-CTTT--------TTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred CccEEEEECCC-CCE----EEEEEC-CCCC--------ccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 4668888864 332 122222 0000 0123555665 35555555444 889999876
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.08 E-value=0.0033 Score=60.26 Aligned_cols=166 Identities=13% Similarity=0.013 Sum_probs=88.6
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc---ccccceeEEEecCC
Q 015290 127 GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE---WTENMATKIANVGN 203 (409)
Q Consensus 127 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~ 203 (409)
+..++.++.|+.|..+|..+++...............+.. ...+ . .+.++.... ...++.+..+|.++
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~----~P~v----~-~~~v~vg~~~~~~~~~g~v~a~D~~t 187 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITG----APRV----V-KGKVIIGNGGAEYGVRGFVSAYDADT 187 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCS----CCEE----E-TTEEEECCBCTTTCCBCEEEEEETTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecC----CCEE----E-CCEEEEeCCCCCcCCCCEEEEEECCC
Confidence 4578888899999999999999887765421110000000 0000 0 111111110 11256777777765
Q ss_pred cccceeeeeecc---------------------------ccccceeEEEeCCCCCeEEEe-cCC----------------
Q 015290 204 SVHARCQKVYPH---------------------------AHDFNINSISNNSDCETFVSA-DDL---------------- 239 (409)
Q Consensus 204 ~~~~~~~~~~~~---------------------------~~~~~v~~l~~~~~~~~l~~~-~d~---------------- 239 (409)
..........-. +.......+++.|+...++.+ .++
T Consensus 188 G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l 267 (668)
T 1kv9_A 188 GKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNL 267 (668)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred CcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCce
Confidence 332221111000 011112346788888888877 665
Q ss_pred ---eEEEEEccCCCceeeeeecCCCcCcC--ccCceEEEEEeCCCCC---EEEEEeCCCeEEEEeCCCcccc
Q 015290 240 ---RINLWNLEISDQCFNIVDMKPSNMDD--LTEVITSAEFHPIYCN---LLAYSSSRGFVRLVDMRQSALC 303 (409)
Q Consensus 240 ---~i~lwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~---~l~s~s~dg~i~iwd~~~~~~~ 303 (409)
.|..+|.. +++.+..+.......-. .........+..+| + .++.++.+|.+.++|..++++.
T Consensus 268 ~~~~v~AlD~~-tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G-~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 268 YLSSILAIRPD-TGKLAWHYQVTPGDSWDFTATQQITLAELNIDG-KPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp TTTEEEEECTT-TCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT-EEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eeeeEEEEcCC-CCceeeEeecCCCccccccCCCCcEEEEeccCC-cEEEEEEEECCCCEEEEEECCCCCEe
Confidence 38889988 66666554322110000 01223333334456 4 6889999999999999998753
No 262
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.08 E-value=0.00017 Score=62.57 Aligned_cols=115 Identities=10% Similarity=-0.063 Sum_probs=70.1
Q ss_pred ceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCC
Q 015290 220 NINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMR 298 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~ 298 (409)
.+.++...+++. +..+ .++.|..+|.. +.....+. .....+.++...+++ .+++. + +.|..+| .
T Consensus 138 ~~~~~~~~~~g~-l~vgt~~~~l~~~d~~--g~~~~~~~-------~~~~~~~~~~~d~~g-~l~v~-t--~~l~~~d-~ 202 (330)
T 3hxj_A 138 IYATPIVSEDGT-IYVGSNDNYLYAINPD--GTEKWRFK-------TNDAITSAASIGKDG-TIYFG-S--DKVYAIN-P 202 (330)
T ss_dssp CCSCCEECTTSC-EEEECTTSEEEEECTT--SCEEEEEE-------CSSCCCSCCEECTTC-CEEEE-S--SSEEEEC-T
T ss_pred eeeeeEEcCCCE-EEEEcCCCEEEEECCC--CCEeEEEe-------cCCCceeeeEEcCCC-EEEEE-e--CEEEEEC-C
Confidence 355566677776 4455 88999999987 44433321 123345667777777 65544 4 7789999 5
Q ss_pred CccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEEEEccCCCcceEEEecc
Q 015290 299 QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIH 368 (409)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~ 368 (409)
+++. .+.. . .....+.++...++|.+.+...++.|..+|.. ++.+..+...
T Consensus 203 ~g~~------~~~~-~----------~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~--g~~~~~~~~~ 253 (330)
T 3hxj_A 203 DGTE------KWNF-Y----------AGYWTVTRPAISEDGTIYVTSLDGHLYAINPD--GTEKWRFKTG 253 (330)
T ss_dssp TSCE------EEEE-C----------CSSCCCSCCEECTTSCEEEEETTTEEEEECTT--SCEEEEEECS
T ss_pred CCcE------EEEE-c----------cCCcceeceEECCCCeEEEEcCCCeEEEECCC--CCEeEEeeCC
Confidence 5442 1211 0 00235778888888876665556888888853 5666555543
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.06 E-value=0.0037 Score=58.66 Aligned_cols=80 Identities=15% Similarity=0.027 Sum_probs=47.7
Q ss_pred CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEec
Q 015290 289 RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKI 367 (409)
Q Consensus 289 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~ 367 (409)
+|.|..||..+++.. +.. .. ...+....+...+..++.++ ++.|+.||.++ ++.+..+..
T Consensus 443 ~g~l~a~D~~tG~~~------W~~-~~-----------~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t-G~~lw~~~~ 503 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAK------WTK-WE-----------KFAAWGGTLYTKGGLVWYATLDGYLKALDNKD-GKELWNFKM 503 (571)
T ss_dssp CEEEEEECTTTCCEE------EEE-EE-----------SSCCCSBCEEETTTEEEEECTTSEEEEEETTT-CCEEEEEEC
T ss_pred CCeEEEEECCCCCEE------EEe-cC-----------CCCccceeEEECCCEEEEEcCCCeEEEEECCC-CCEEEEEeC
Confidence 477888888887642 222 00 11222333333455666676 59999999987 888888875
Q ss_pred ccCcccccccccCCCCccceeeEEEcCCCCeEEE
Q 015290 368 HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT 401 (409)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 401 (409)
...... .-+.+..+|+.++.
T Consensus 504 ~~~~~~--------------~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 504 PSGGIG--------------SPMTYSFKGKQYIG 523 (571)
T ss_dssp SSCCCS--------------CCEEEEETTEEEEE
T ss_pred CCCcEe--------------eeEEEEECCEEEEE
Confidence 543221 23556678875443
No 264
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.03 E-value=0.013 Score=57.55 Aligned_cols=290 Identities=9% Similarity=0.034 Sum_probs=151.8
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccce
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLE 111 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 111 (409)
...|.++...++|.+.+ |+.+| |.+|+..++.. ..+...... ...+.
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~----------------------------~~~~~~~~~---~~~l~ 308 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFND-LNIYHEGTDSF----------------------------ASYSSNPVE---NGSLS 308 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESSC-EEEEETTTTEE----------------------------EEECCCTTS---TTSCS
T ss_pred CCeEEEEEEcCCCCEEE-EeCCh-hheEcCCCCeE----------------------------EEEecCCCC---CCCCC
Confidence 46799999999887544 55554 88888765542 111100000 00000
Q ss_pred eccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccccc
Q 015290 112 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 112 ~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
...|.++.. +++|. |-.|+.++-|..|+..++............ ......+.+......+.+. .|..
T Consensus 309 -~~~i~~i~~--D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~-------~l~~~~V~~i~~d~~g~lW-iGt~- 375 (795)
T 4a2l_A 309 -QRSVRSIFM--DSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKN-------SLSDNVVSCIVEDKDKNLW-IGTN- 375 (795)
T ss_dssp -SSCEEEEEE--CTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSS-------SCSCSSEEEEEECTTSCEE-EEES-
T ss_pred -CCcEEEEEE--eCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCC-------CCCCCeeEEEEECCCCCEE-EEEC-
Confidence 157999988 67774 556777677888887766543332111000 0011112222222222211 1211
Q ss_pred ccceeEEEecCCcccceeeeeecc--------ccccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCc
Q 015290 192 ENMATKIANVGNSVHARCQKVYPH--------AHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSN 262 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~ 262 (409)
++-+..++..+.. ...+.. -....|.++...++++.|..| .++-|..||.. .+..... ....
T Consensus 376 -~~Gl~~~~~~~~~----~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~-~~~~~~~-~~~~-- 446 (795)
T 4a2l_A 376 -DGGLNLYNPITQR----FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN-SGQVENF-NQRN-- 446 (795)
T ss_dssp -SSCEEEECTTTCC----EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT-TCCEEEE-CTTT--
T ss_pred -CCCeEEEcCCCCc----EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC-CCcEEEe-ecCC--
Confidence 3356666655421 111100 123568899988888845556 76779999987 4433222 1110
Q ss_pred CcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEE
Q 015290 263 MDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 342 (409)
Q Consensus 263 ~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 342 (409)
-......|.++...++| .+.+.. .+| |.+||..+++. ..+.. ...+. .-....|.++...++|++.
T Consensus 447 ~~l~~~~v~~i~~d~~g-~lwigt-~~G-l~~~~~~~~~~-----~~~~~-~~~~~-----~~~~~~i~~i~~d~~g~lW 512 (795)
T 4a2l_A 447 SQLVNENVYAILPDGEG-NLWLGT-LSA-LVRFNPEQRSF-----TTIEK-EKDGT-----PVVSKQITTLFRDSHKRLW 512 (795)
T ss_dssp SCCSCSCEEEEEECSSS-CEEEEE-SSC-EEEEETTTTEE-----EECCB-CTTCC-----BCCCCCEEEEEECTTCCEE
T ss_pred CCcCCCeeEEEEECCCC-CEEEEe-cCc-eeEEeCCCCeE-----EEccc-ccccc-----ccCCceEEEEEECCCCCEE
Confidence 01234578999999888 655544 444 88899877543 11111 00000 0012468899999999876
Q ss_pred EEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 343 LSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 343 ~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
+... +.|..||..+ ++. .+...... ..+ ....|.++..+++|.+.++.
T Consensus 513 igt~-~Gl~~~~~~~-~~~--~~~~~~~~-~~l-------~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 513 IGGE-EGLSVFKQEG-LDI--QKASILPV-SNV-------TKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp EEES-SCEEEEEEET-TEE--EECCCSCS-CGG-------GGSCEEEEEECTTSCEEEEE
T ss_pred EEeC-CceEEEeCCC-CeE--EEecCCCC-CCC-------CCCeeEEEEECCCCCEEEEe
Confidence 6555 6788899864 333 33211000 000 00123578888888755443
No 265
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.99 E-value=0.0013 Score=63.19 Aligned_cols=63 Identities=6% Similarity=0.041 Sum_probs=42.5
Q ss_pred CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEec
Q 015290 289 RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKI 367 (409)
Q Consensus 289 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~ 367 (409)
+|.|..||+.+++.. |.. .. ..+.....+...+.+++.++ ++.|+.||.++ ++.+..+..
T Consensus 437 ~g~l~A~D~~tG~~~------W~~-~~-----------~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t-G~~l~~~~~ 497 (668)
T 1kv9_A 437 SGALLAWDPVKQKAA------WKV-PY-----------PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADK-GEALWQFEA 497 (668)
T ss_dssp EEEEEEEETTTTEEE------EEE-EE-----------SSSCCCCEEEETTTEEEEECTTSEEEEEETTT-CCEEEEEEC
T ss_pred cceEEEEeCCCCcEE------EEc-cC-----------CCCCcCceeEeCCCEEEEECCcccchhhhhhc-ChhheEecC
Confidence 478999999888742 222 00 11233344555677888887 49999999986 888888876
Q ss_pred ccC
Q 015290 368 HEH 370 (409)
Q Consensus 368 ~~~ 370 (409)
...
T Consensus 498 ~~~ 500 (668)
T 1kv9_A 498 QSG 500 (668)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.97 E-value=0.0082 Score=53.33 Aligned_cols=121 Identities=7% Similarity=-0.047 Sum_probs=69.9
Q ss_pred cceeEEEeCCCCCeEEEe--cC-CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEE
Q 015290 219 FNINSISNNSDCETFVSA--DD-LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLV 295 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~--~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 295 (409)
.....++++|.+..|+.+ .. +.|..+++. +.....+ ....-.....|+++|++..++++-+..+.|..+
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~------~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRRII------ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEE------ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC--CCCcEEE------EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 345789999877666655 44 678888876 3322221 122234578999998763455555567889999
Q ss_pred eCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEe
Q 015290 296 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFK 366 (409)
Q Consensus 296 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~ 366 (409)
|+..... ...... .......+++. .+.++.+-.. +.|..+|..+ ++.+..+.
T Consensus 274 d~dG~~~----~~~~~~-------------~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~-G~~~~~i~ 326 (386)
T 3v65_B 274 NLDGSHR----KAVISQ-------------GLPHPFAITVF-EDSLYWTDWHTKSINSANKFT-GKNQEIIR 326 (386)
T ss_dssp CTTSCSC----EEEECS-------------SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTT-CCSCEEEE
T ss_pred eCCCCee----EEEEEC-------------CCCCceEEEEE-CCEEEEeeCCCCeEEEEECCC-CcceEEEc
Confidence 9865321 011111 01245667773 3333334333 8888888543 55555544
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.94 E-value=0.0031 Score=60.48 Aligned_cols=242 Identities=10% Similarity=0.031 Sum_probs=120.2
Q ss_pred EEEEECCCCCEEEEEe-cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccceecc
Q 015290 36 SAIEFDKTGDYLAVGD-RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEE 114 (409)
Q Consensus 36 ~~v~~~~~~~~la~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 114 (409)
.++++.+++++++.|+ .+..+.+||..+.+- ..+..+.... .
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W-------------------------~~~~~~~~~R------------~ 288 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW-------------------------IPGPDMQVAR------------G 288 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEE-------------------------EECCCCSSCC------------S
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCce-------------------------eECCCCCccc------------c
Confidence 3567788999999998 445899999876542 1111111111 1
Q ss_pred ceEEEEEEecCCCCEEEEEe-CC-----CeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecc
Q 015290 115 KINRVRWCAAPNGSMFILST-ND-----KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 188 (409)
Q Consensus 115 ~v~~l~~~~s~~~~~l~s~~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
. .++.. -++++.++.|+ .+ ..+.+||..++...........+ ....... .+.......++..+
T Consensus 289 ~-~s~~~--~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p-------~~~~~~~-~~~~~~~~iyv~Gg 357 (656)
T 1k3i_A 289 Y-QSSAT--MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP-------MLTADKQ-GLYRSDNHAWLFGW 357 (656)
T ss_dssp S-CEEEE--CTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGG-------GCCCCTT-GGGTTTCSCCEEEC
T ss_pred c-cceEE--ecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccc-------ccccccc-ceeecCCceEEEEC
Confidence 1 22334 26888888888 44 57899999988766542111000 0000000 00001111111111
Q ss_pred cc------cccceeEEEecCCcccceeeeeeccc------cccceeEEEeC-CCCCeEEEe-cCC-----------eEEE
Q 015290 189 EW------TENMATKIANVGNSVHARCQKVYPHA------HDFNINSISNN-SDCETFVSA-DDL-----------RINL 243 (409)
Q Consensus 189 ~~------~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~v~~l~~~-~~~~~l~~~-~d~-----------~i~l 243 (409)
.. .....+..||..+..-....... .. ....-.++.+. .+++.++.| .++ .+.+
T Consensus 358 ~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~-~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~ 436 (656)
T 1k3i_A 358 KKGSVFQAGPSTAMNWYYTSGSGDVKSAGKR-QSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITL 436 (656)
T ss_dssp GGGCEEECCSSSEEEEEECSTTCEEEEEEEC-EETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEEC
T ss_pred CCCcEEEecCccceeeeecCCcceeecCCcc-ccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEc
Confidence 10 11336778887764322211111 00 01112344443 367777777 532 5777
Q ss_pred EEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC-----------CeEEEEeCCCccccccccccccc
Q 015290 244 WNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-----------GFVRLVDMRQSALCDHSARILRD 312 (409)
Q Consensus 244 wd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-----------g~i~iwd~~~~~~~~~~~~~~~~ 312 (409)
||.. ........ . ..+... ..-.++...|++ ++++.|+.+ ..+.+||..+++. ..+..
T Consensus 437 yd~~-~~~W~~~~-~--~~mp~~-R~~~~~~~l~~g-~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W-----~~~~~ 505 (656)
T 1k3i_A 437 GEPG-TSPNTVFA-S--NGLYFA-RTFHTSVVLPDG-STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF-----YKQNP 505 (656)
T ss_dssp CSTT-SCCEEEEC-T--TCCSSC-CBSCEEEECTTS-CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE-----EECCC
T ss_pred CCCC-CCCeeEEc-c--CCCCCC-cccCCeEECCCC-CEEEECCcccCcCcCCCCcccceEEEcCCCCce-----eecCC
Confidence 8876 33322221 0 011111 112355667888 999998854 4688999876542 11111
Q ss_pred cccccCCcccccccccceeeeEeccCCCEEEEeec
Q 015290 313 AAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 347 (409)
Q Consensus 313 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~ 347 (409)
.+. .........+.|+|+.++.|+.
T Consensus 506 ---~~~-------~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 506 ---NSI-------VRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp ---CSS-------CCCTTEEEEECTTSCEEEEECC
T ss_pred ---CCC-------ccccccHhhcCCCcEEEecCCC
Confidence 000 0112234456799999998863
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=0.023 Score=55.75 Aligned_cols=284 Identities=12% Similarity=0.084 Sum_probs=150.5
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeee-ecCCCccccccccc
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTE-FQSHEPEFDYLKSL 110 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~~~~~~~~ 110 (409)
...|.++...++|.+ ..|+.++-|..|+..++... .+.. -....
T Consensus 362 ~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~-------------------------~~~~~~~~~~--------- 406 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVAI-------------------------YNKENRELLS--------- 406 (781)
T ss_dssp SSCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEEE-------------------------CC-----CCC---------
T ss_pred CcceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeEE-------------------------EccCCCCCCC---------
Confidence 357999999988874 45665566888887654310 0000 00111
Q ss_pred eeccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 190 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (409)
..|.++.. .+++. |..|+.++-+..++..+++........ .....+......+.+.+. .+.
T Consensus 407 ---~~v~~i~~--d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~-----------~~~~~v~~i~~d~~g~lw-igt- 467 (781)
T 3v9f_A 407 ---NSVLCSLK--DSEGN-LWFGTYLGNISYYNTRLKKFQIIELEK-----------NELLDVRVFYEDKNKKIW-IGT- 467 (781)
T ss_dssp ---SBEEEEEE--CTTSC-EEEEETTEEEEEECSSSCEEEECCSTT-----------TCCCCEEEEEECTTSEEE-EEE-
T ss_pred ---cceEEEEE--CCCCC-EEEEeccCCEEEEcCCCCcEEEeccCC-----------CCCCeEEEEEECCCCCEE-EEE-
Confidence 57888887 56665 555776667888888777654432100 011112222222222221 111
Q ss_pred cccceeEEEecCCcccceeeeeec--cccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccC
Q 015290 191 TENMATKIANVGNSVHARCQKVYP--HAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 268 (409)
Q Consensus 191 ~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 268 (409)
.+-+..++..+..-.. ..... ......|.++...++|...+...++-+..||.. .+. +..+... . .-...
T Consensus 468 --~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~-~~~-~~~~~~~-~--~l~~~ 539 (781)
T 3v9f_A 468 --HAGVFVIDLASKKVIH-HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPD-MQL-VRKFNQY-E--GFCSN 539 (781)
T ss_dssp --TTEEEEEESSSSSCCE-EECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTT-CCE-EEEECTT-T--TCSCS
T ss_pred --CCceEEEeCCCCeEEe-cccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCC-CCe-EEEccCC-C--CCCCC
Confidence 1235566654421111 00000 011357889999988876665554447778876 333 3322111 0 11245
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecC
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYM 348 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~ 348 (409)
.|.++..+++| .+.++. .+|.+..||..+++. ..+.. ..+. ....|.++...++|++.+++. +
T Consensus 540 ~i~~i~~d~~g-~lWi~T-~~Glv~~~d~~~~~~-----~~~~~-~~gl--------~~~~i~~i~~d~~g~lW~~t~-~ 602 (781)
T 3v9f_A 540 TINQIYRSSKG-QMWLAT-GEGLVCFPSARNFDY-----QVFQR-KEGL--------PNTHIRAISEDKNGNIWASTN-T 602 (781)
T ss_dssp CEEEEEECTTS-CEEEEE-TTEEEEESCTTTCCC-----EEECG-GGTC--------SCCCCCEEEECSSSCEEEECS-S
T ss_pred eeEEEEECCCC-CEEEEE-CCCceEEECCCCCcE-----EEccc-cCCC--------CCceEEEEEECCCCCEEEEcC-C
Confidence 78999999988 665544 466558888876542 22222 0000 023577888899998776654 4
Q ss_pred eEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCC
Q 015290 349 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRR 406 (409)
Q Consensus 349 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg 406 (409)
.|..+|.. ...+..+....+... ..+...++...++|.+++. +.+|
T Consensus 603 Gl~~~~~~--~~~~~~~~~~dGl~~---------~~f~~~~~~~~~~G~l~~g-~~~G 648 (781)
T 3v9f_A 603 GISCYITS--KKCFYTYDHSNNIPQ---------GSFISGCVTKDHNGLIYFG-SING 648 (781)
T ss_dssp CEEEEETT--TTEEEEECGGGTCCS---------SCEEEEEEEECTTSCEEEE-ETTE
T ss_pred ceEEEECC--CCceEEecccCCccc---------cccccCceEECCCCEEEEE-CCCc
Confidence 47778876 345556654433211 1111135667788876554 4444
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.79 E-value=0.00024 Score=69.28 Aligned_cols=113 Identities=12% Similarity=0.044 Sum_probs=71.3
Q ss_pred ceeEEEeC-CCCCeEEEe--cCC----eEEEEEccCCC-ceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC--
Q 015290 220 NINSISNN-SDCETFVSA--DDL----RINLWNLEISD-QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-- 289 (409)
Q Consensus 220 ~v~~l~~~-~~~~~l~~~--~d~----~i~lwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-- 289 (409)
.+...+|| |||++|+.+ .+| .|+++|+. ++ +.+.. .+. ....+++|+||| +.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~-~g~~~l~~------~~~---~~~~~~~WspDg-~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRIS-DPSQTIAD------KVS---GTNGEIVWGPDH-TSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETT-CTTCCCCC------CEE---EECSCCEECSST-TEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECC-CCCEeCCc------ccc---CceeeEEEecCC-CEEEEEEECCC
Confidence 56788999 999999865 233 49999998 44 32110 011 123468999999 777766654
Q ss_pred ---CeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee---c-CeEEEEEccC
Q 015290 290 ---GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD---Y-MNLKLWDIRM 357 (409)
Q Consensus 290 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~---~-~~v~iwd~~~ 357 (409)
..|.++++.++.... ..++.. ........+.|||||++|+... . ..|+++|+..
T Consensus 244 ~~~~~v~~~~lgt~~~~~--~lv~~~------------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQSED--VCLYEE------------HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CCEEEEEEEETTSCGGGC--EEEEEC------------CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred CCCCEEEEEECCCCchhc--EEEEec------------CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 257778876643210 111211 0012356789999999988543 2 6788899875
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.78 E-value=0.016 Score=50.64 Aligned_cols=121 Identities=7% Similarity=-0.047 Sum_probs=68.9
Q ss_pred cceeEEEeCCCCCeEEEe--cC-CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEE
Q 015290 219 FNINSISNNSDCETFVSA--DD-LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLV 295 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~--~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 295 (409)
.....++++|.+..|+.+ .. +.|..+++. +.....+ ....-.....++++|++..++++-...+.|..+
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~------~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRRII------ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEES------CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCC--CCCcEEE------EECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 345789999976666654 44 778888876 3322221 122234578999998762455555567889999
Q ss_pred eCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEe
Q 015290 296 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFK 366 (409)
Q Consensus 296 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~ 366 (409)
|+..... ...... .......+++. .+.+..+-.. +.|..+|..+ ++....+.
T Consensus 231 ~~dG~~~----~~~~~~-------------~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~-G~~~~~i~ 283 (349)
T 3v64_C 231 NLDGSHR----KAVISQ-------------GLPHPFAITVF-EDSLYWTDWHTKSINSANKFT-GKNQEIIR 283 (349)
T ss_dssp ETTSCSC----EEEECS-------------SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTT-CCSCEEEE
T ss_pred eCCCCce----EEEEeC-------------CCCCceEEEEE-CCEEEEecCCCCeEEEEEccC-CCccEEec
Confidence 9865321 011111 01235667773 3333333333 8888888543 55444443
No 271
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.69 E-value=0.024 Score=53.28 Aligned_cols=79 Identities=14% Similarity=0.149 Sum_probs=48.6
Q ss_pred CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-cCeEEEEEccCCCcceEEEec
Q 015290 289 RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKI 367 (409)
Q Consensus 289 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~ 367 (409)
+|.|..||+.+++.. |+. .. ..++..-.....+.+++.|+ |+.++.||.++ ++.+-.++.
T Consensus 465 ~G~l~A~D~~tG~~~------W~~-~~-----------~~~~~~g~~~tagglvf~g~~dg~l~A~D~~t-G~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVV------WEH-KE-----------HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKS-GKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEE------EEE-EE-----------SSCCCSCCEEETTTEEEEECTTSEEEEEETTT-CCEEEEEEC
T ss_pred cceEEEEECCCCCEE------EEe-cC-----------CCCCcccceEeCCCEEEEECCCCcEEEEECCC-CCEEEEecC
Confidence 578889999888642 322 10 01222222222456777776 59999999987 898888876
Q ss_pred ccCcccccccccCCCCccceeeEEEcCCCCeEE
Q 015290 368 HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA 400 (409)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 400 (409)
...... .-+.|..||+..+
T Consensus 526 ~~g~~a--------------~P~~y~~~G~qYv 544 (582)
T 1flg_A 526 GSGIVS--------------PPITWEQDGEQYL 544 (582)
T ss_dssp SSCCCS--------------CCEEEEETTEEEE
T ss_pred CCCccc--------------CceEEEECCEEEE
Confidence 554321 1367777887433
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.66 E-value=0.0073 Score=54.53 Aligned_cols=113 Identities=12% Similarity=-0.006 Sum_probs=64.7
Q ss_pred cceeEEEeCCCCCeEEEecCC-----eEEEEEccCCCcee-eeeecCCCcCcCccCceEEEEEeC-CCCCEEEEEeCCCe
Q 015290 219 FNINSISNNSDCETFVSADDL-----RINLWNLEISDQCF-NIVDMKPSNMDDLTEVITSAEFHP-IYCNLLAYSSSRGF 291 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~~d~-----~i~lwd~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~s~dg~ 291 (409)
.....++++++++++++...+ .+...+.. ..... .. +. .-.....++++| ++ .++++-..++.
T Consensus 182 ~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~-~~~~~~~~-------~~-~~~~P~giavd~~~G-~lyv~d~~~~~ 251 (433)
T 4hw6_A 182 GQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA-SGFTERLS-------LC-NARGAKTCAVHPQNG-KIYYTRYHHAM 251 (433)
T ss_dssp SCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG-GTTCCEEE-------EE-ECSSBCCCEECTTTC-CEEECBTTCSE
T ss_pred CCccEEEECCCCCEEEEcCCCCcccceEEEEECC-CCeecccc-------cc-ccCCCCEEEEeCCCC-eEEEEECCCCE
Confidence 346789999999944443321 13333322 11110 11 11 123456788999 66 76666667788
Q ss_pred EEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 292 VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 292 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
|+.+|..++.... ..+.. .. ...-..++|+|+|++|..+. . +.|+.+++.
T Consensus 252 V~~~d~~~g~~~~---~~~~~---~~---------~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 252 ISSYDPATGTLTE---EEVMM---DT---------KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEECTTTCCEEE---EEEEC---SC---------CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEEECCCCeEEE---EEecc---CC---------CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 9999987654210 11111 00 11234699999999776664 3 899998865
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.65 E-value=0.023 Score=48.83 Aligned_cols=122 Identities=7% Similarity=-0.025 Sum_probs=69.4
Q ss_pred ceeEEEeCCCCCeEEEe--cC-CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 015290 220 NINSISNNSDCETFVSA--DD-LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 296 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~--~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd 296 (409)
....++++|.+..|+.+ .. +.|...++. +.....+ ....-.....++++|++..++++-+..+.|..+|
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--G~~~~~~------~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d 192 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSL------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 192 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCCEEEE------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCC--CCCeEEE------EECCCCCceEEEEeccCCEEEEEECCCCeEEEEe
Confidence 45789999876666554 33 688888876 3333322 1112346789999988724445555667899999
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEEe
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFK 366 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~ 366 (409)
+..... +.+.. . . ........+++.. +.++.+-.. +.|..+|..+ ++.+..+.
T Consensus 193 ~dg~~~-----~~~~~-~-~--------~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~-g~~~~~i~ 246 (316)
T 1ijq_A 193 VNGGNR-----KTILE-D-E--------KRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLT-GSDVNLLA 246 (316)
T ss_dssp TTSCSC-----EEEEE-C-T--------TTTSSEEEEEEET-TEEEEEETTTTEEEEEETTT-CCCCEEEE
T ss_pred cCCCce-----EEEee-c-C--------CccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCC-CcceEEEe
Confidence 875321 22211 0 0 0012345677753 333333334 8999998754 55444443
No 274
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.64 E-value=0.025 Score=48.89 Aligned_cols=153 Identities=9% Similarity=0.015 Sum_probs=82.6
Q ss_pred ccceeEEEeCCCCCeEEEecCCeEE-EEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 015290 218 DFNINSISNNSDCETFVSADDLRIN-LWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 296 (409)
Q Consensus 218 ~~~v~~l~~~~~~~~l~~~~d~~i~-lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd 296 (409)
...+..+++.+++.+++.+.++.+. -+|-. +.....+. ......+..+.+.+++ .+++ ++.+|.+.+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g--G~tW~~~~------~~~~~~~~~~~~~~~g-~~~~-~~~~G~~~~s~ 231 (327)
T 2xbg_A 162 IGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG--QTAWEPHN------RTTSRRLHNMGFTPDG-RLWM-IVNGGKIAFSD 231 (327)
T ss_dssp CCCEEEEEECTTSCEEEEETTSSEEEEECTT--CSSCEEEE------CCSSSCEEEEEECTTS-CEEE-EETTTEEEEEE
T ss_pred CcceEEEEEcCCCcEEEEECCCcEEEEeCCC--CCceeECC------CCCCCccceeEECCCC-CEEE-EeCCceEEEec
Confidence 3457788999998888888444443 33421 22222221 1234568899999988 6554 45678777764
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccc
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLC 376 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 376 (409)
...++ .|.. ...+.. .....+..+++.+++.+++++.++.| ++..+ .++.-..+........
T Consensus 232 ~D~G~-------tW~~-~~~~~~-----~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~D-gG~tW~~~~~~~~~~~--- 293 (327)
T 2xbg_A 232 PDNSE-------NWGE-LLSPLR-----RNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQD-GGQTWQQDVDVKKVPS--- 293 (327)
T ss_dssp TTEEE-------EECC-CBCTTS-----SCCSCEEEEEESSSSCEEEEESTTCE-EEESS-TTSSCEECGGGTTSSS---
T ss_pred CCCCC-------eeEe-ccCCcc-----cCCcceEEEEecCCCEEEEEeCCCeE-EEeCC-CCcccEEcCccCCCCC---
Confidence 33232 1211 000000 00135788899998888888877766 34433 2544444432211000
Q ss_pred cccCCCCccceeeEEEcCCCCeEEEcccCCCC
Q 015290 377 DLYNNDSIFDKFECSVSGDGLHFATGSYRRDN 408 (409)
Q Consensus 377 ~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~i 408 (409)
. +.++.|.++++.+ .++.+|.|
T Consensus 294 ------~---~~~v~~~~~~~~~-~~G~~G~i 315 (327)
T 2xbg_A 294 ------N---FYKILFFSPDQGF-ILGQKGIL 315 (327)
T ss_dssp ------C---CCEEEEEETTEEE-EECSTTEE
T ss_pred ------C---eEEEEEECCCceE-EEcCCceE
Confidence 0 1478887666544 44556643
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.63 E-value=0.025 Score=48.58 Aligned_cols=110 Identities=12% Similarity=0.088 Sum_probs=69.0
Q ss_pred eeEEEeCCCCCeEEE-e-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEe--CCCeEEEEe
Q 015290 221 INSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS--SRGFVRLVD 296 (409)
Q Consensus 221 v~~l~~~~~~~~l~~-~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s--~dg~i~iwd 296 (409)
...+++.+.+..|+. - ..+.|.++++. . .....+ ..........++++|.+ ..|+... ..+.|...+
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~d-G-~~~~~l------~~~~~~~P~giavdp~~-g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLD-G-SLRKVL------FWQELDQPRAIALDPSS-GFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETT-S-CSCEEE------ECSSCSSEEEEEEEGGG-TEEEEEECSSSCEEEEEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECC-C-CcEEEE------EeCCCCCccEEEEeCCC-CEEEEEecCCCCEEEEEE
Confidence 467888875555544 4 67899999987 3 222222 12233456899999976 4444443 357788888
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
+..... ..+-. ..-...+.++++|++..|..+. . +.|..+|+.
T Consensus 152 ~dG~~~-----~~~~~------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 152 MDGSSR-----FIIIN------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp TTSCSC-----EEEEC------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCCCCe-----EEEEE------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 764321 11111 0013467899999888777765 4 899999986
No 276
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.61 E-value=0.029 Score=48.78 Aligned_cols=145 Identities=12% Similarity=0.147 Sum_probs=80.6
Q ss_pred ceeEEEeCC--CCC-eE-EEe-c--CCeEEEEEccCCCceeeeeecCCCcCcC-ccCceEEEEEeCCCCCEEEEEeC---
Q 015290 220 NINSISNNS--DCE-TF-VSA-D--DLRINLWNLEISDQCFNIVDMKPSNMDD-LTEVITSAEFHPIYCNLLAYSSS--- 288 (409)
Q Consensus 220 ~v~~l~~~~--~~~-~l-~~~-~--d~~i~lwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~s~--- 288 (409)
....+.+.+ ++. +| ++- . +.+|.+|++...+.....+. ++.+ .-...+.+.+.++| .+.++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~----~~~g~~~~~pND~~v~~~G-~fyvt~~~~ft 187 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLK----TIRHKLLPSVNDIVAVGPE-HFYATNDHYFI 187 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEE----EECCTTCSSEEEEEEEETT-EEEEEESCSCS
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEe----ccccCCCCCCceEEEeCCC-CEEecCCcEeC
Confidence 445566544 343 34 332 3 67888988874333322211 0111 22457899999999 76666531
Q ss_pred --------------CCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEE
Q 015290 289 --------------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKL 352 (409)
Q Consensus 289 --------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~i 352 (409)
.|.|..+|. ++. +.+.. .-...+.++|+||++.|..+. . +.|..
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~--~~~-----~~~~~-------------~l~~pNGia~spDg~~lYvadt~~~~I~~ 247 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSP--NDV-----RVVAE-------------GFDFANGINISPDGKYVYIAELLAHKIHV 247 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECT--TCC-----EEEEE-------------EESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred CcccccchhhccCCccEEEEEEC--CeE-----EEeec-------------CCcccCcceECCCCCEEEEEeCCCCeEEE
Confidence 233444443 211 11111 123568899999999888775 3 99999
Q ss_pred EEccCCCcce--EEEecccCcccccccccCCCCccceeeEEEcC-CCCeEEEcccC
Q 015290 353 WDIRMDSTPV--ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFATGSYR 405 (409)
Q Consensus 353 wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~s~s~d 405 (409)
|++..+++.. ..+.....+ -.+++.+ +|.+.+++..+
T Consensus 248 ~~~~~~g~l~~~~~~~~~g~P----------------DGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 248 YEKHANWTLTPLRVLSFDTLV----------------DNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEECTTSCEEEEEEEECSSEE----------------EEEEECTTTCCEEEEEESC
T ss_pred EEECCCCcEecCEEEeCCCCC----------------ceEEEeCCCCcEEEEecCC
Confidence 9987434321 223111111 3788888 58877655433
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.59 E-value=0.029 Score=48.22 Aligned_cols=118 Identities=8% Similarity=-0.039 Sum_probs=72.1
Q ss_pred eeEEEeCCCCCeEE-Ee-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC-CeEEEEeC
Q 015290 221 INSISNNSDCETFV-SA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-GFVRLVDM 297 (409)
Q Consensus 221 v~~l~~~~~~~~l~-~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-g~i~iwd~ 297 (409)
...+++.+.+..|+ +- ..+.|.+.++. ....... ..........++++|.+..++.+.... +.|...++
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~-------~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTL-------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEE-------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCC-CCceEEE-------EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 46788887555554 44 78899999987 3322222 111224568999999662444444333 67888887
Q ss_pred CCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEccCCCcceEEE
Q 015290 298 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~~~~~~~~~~ 365 (409)
..... +.+.. ..-.....++++|++..|..+. . +.|..+|+. +.....+
T Consensus 151 dG~~~-----~~~~~------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d--g~~~~~~ 201 (316)
T 1ijq_A 151 NGVDI-----YSLVT------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTI 201 (316)
T ss_dssp TSCCE-----EEEEC------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEE
T ss_pred CCCCe-----EEEEE------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecC--CCceEEE
Confidence 54321 11111 0023578899999888877765 3 899999986 4444444
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.59 E-value=0.045 Score=51.51 Aligned_cols=49 Identities=18% Similarity=0.146 Sum_probs=33.0
Q ss_pred CCCEEEEee-cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCe-EEE
Q 015290 338 DGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLH-FAT 401 (409)
Q Consensus 338 ~g~~l~sg~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~s 401 (409)
.+.+++.++ |+.++.||.++ ++.+-.++....... .-+.|..||+. +++
T Consensus 483 agg~vf~gt~dg~l~A~D~~t-G~~lW~~~l~~g~~~--------------~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDT-GDLLWKFKIPSGAIG--------------YPMTYTHKGTQYVAI 533 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTT-CCEEEEEECSSCCCS--------------CCEEEEETTEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCC-CCEEEEeeCCCCcEe--------------ccEEEEeCCEEEEEE
Confidence 456677776 59999999987 888888765443321 23666678874 443
No 279
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=0.069 Score=52.31 Aligned_cols=296 Identities=9% Similarity=0.073 Sum_probs=141.9
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCcccccccccee
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEI 112 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 112 (409)
..|.++...++|.+.+ |+.+ -+.+||..++.. ..+...... ...+ .
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~----------------------------~~~~~~~~~---~~~l-~ 256 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNANTETF----------------------------TNFHNNPGN---IHGA-L 256 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETTTTEE----------------------------EC---------------C
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCCCCcE----------------------------EEEEcCCCc---cccc-c
Confidence 5689999988887655 4445 588888765542 001000000 0000 0
Q ss_pred ccceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcc-cccccccccccCceeccCCCCCceeeccccc
Q 015290 113 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPF-VSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 113 ~~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
...|.++.. ..+| .|..|+..+-|.+++..++.........+... ............+.+......+.+ -.+..
T Consensus 257 ~~~i~~i~~--d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~l-Wigt~- 331 (781)
T 3v9f_A 257 SSYIFSIKQ--LKDN-KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNI-WIGTW- 331 (781)
T ss_dssp CCCEEEEEE--CTTS-EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCE-EEEEB-
T ss_pred CceEEEEEE--CCCC-CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCE-EEEec-
Confidence 157888887 5666 55566664558888887765433221000000 000000011111222222222211 11111
Q ss_pred ccceeEEEecCCcccceeeee-----eccccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 192 ENMATKIANVGNSVHARCQKV-----YPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 192 ~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
++-+..++.....-...... ...-....|.++...+++...+...++-|..||.. .+. ...+. .+ ....
T Consensus 332 -~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~-~~~-~~~~~-~~--~~~~ 405 (781)
T 3v9f_A 332 -GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENG-KRV-AIYNK-EN--RELL 405 (781)
T ss_dssp -SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETT-EEE-EECC--------CC
T ss_pred -CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECC-CCe-EEEcc-CC--CCCC
Confidence 33455555443111000000 00112356889998888865544466678888876 322 22110 00 1123
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
...|.++...+++ .+.+ |+.++-|..+|..+++. ..+.. . ......|.++...++|.+.+...
T Consensus 406 ~~~v~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~~~~-----~~~~~-~---------~~~~~~v~~i~~d~~g~lwigt~ 468 (781)
T 3v9f_A 406 SNSVLCSLKDSEG-NLWF-GTYLGNISYYNTRLKKF-----QIIEL-E---------KNELLDVRVFYEDKNKKIWIGTH 468 (781)
T ss_dssp CSBEEEEEECTTS-CEEE-EETTEEEEEECSSSCEE-----EECCS-T---------TTCCCCEEEEEECTTSEEEEEET
T ss_pred CcceEEEEECCCC-CEEE-EeccCCEEEEcCCCCcE-----EEecc-C---------CCCCCeEEEEEECCCCCEEEEEC
Confidence 4678999988887 6555 56666788999876543 11111 0 00124688888888887655444
Q ss_pred cCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 347 YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 347 ~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
+.|..||..+ ++............ ....|.++...++|.+.+..
T Consensus 469 -~Gl~~~~~~~-~~~~~~~~~~~~~~----------~~~~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 469 -AGVFVIDLAS-KKVIHHYDTSNSQL----------LENFVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp -TEEEEEESSS-SSCCEEECTTTSSC----------SCSCEEEEEECTTCCEEEEE
T ss_pred -CceEEEeCCC-CeEEecccCccccc----------ccceeEEEEEcCCCCEEEEE
Confidence 6789999864 33322221110000 00113578888888765543
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.56 E-value=0.033 Score=48.12 Aligned_cols=117 Identities=7% Similarity=0.053 Sum_probs=66.2
Q ss_pred ccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeC
Q 015290 218 DFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDM 297 (409)
Q Consensus 218 ~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~ 297 (409)
...+..+++.++++.++.+.+|.+++.+.. .+.....+... .+ .....+.++.+.+++ .+++.+. +|.| .+..
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D-~G~tW~~~~~~--~~-~~~~~~~~v~~~~~~-~~~~~g~-~g~i-~~S~ 276 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNGGKIAFSDPD-NSENWGELLSP--LR-RNSVGFLDLAYRTPN-EVWLAGG-AGAL-LCSQ 276 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEEETT-EEEEECCCBCT--TS-SCCSCEEEEEESSSS-CEEEEES-TTCE-EEES
T ss_pred CCccceeEECCCCCEEEEeCCceEEEecCC-CCCeeEeccCC--cc-cCCcceEEEEecCCC-EEEEEeC-CCeE-EEeC
Confidence 345678888898887766677887776422 23332221100 00 122358899999877 7666654 6655 3344
Q ss_pred CCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEEEEc
Q 015290 298 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDI 355 (409)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~ 355 (409)
..++ .|..-... ......+.++.|.+++++++.|.+|.|.-++-
T Consensus 277 DgG~-------tW~~~~~~-------~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 277 DGGQ-------TWQQDVDV-------KKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp STTS-------SCEECGGG-------TTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCCc-------ccEEcCcc-------CCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 4442 12210000 00123577888887777777777787776653
No 281
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.56 E-value=0.036 Score=48.46 Aligned_cols=27 Identities=33% Similarity=0.589 Sum_probs=21.4
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEe
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFE 60 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~ 60 (409)
..-..|+|.|+|++++ +..+|.|.+++
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~ 57 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR 57 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE
Confidence 3567999999998555 55679999988
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.55 E-value=0.033 Score=47.88 Aligned_cols=120 Identities=5% Similarity=-0.046 Sum_probs=68.2
Q ss_pred cceeEEEeCCCCCeEEEe-c--CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEE
Q 015290 219 FNINSISNNSDCETFVSA-D--DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLV 295 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~-~--d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 295 (409)
.....++++|.+..|+.+ . .+.|...++. +.....+ ....-.....++++|++..++.+=+..+.|..+
T Consensus 122 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~------~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~ 193 (318)
T 3sov_A 122 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFII------INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 193 (318)
T ss_dssp SSEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SCSCEEE------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CCCeEEE------EECCCCCccEEEEeccCCEEEEEECCCCEEEEE
Confidence 345788999876666554 2 5678777776 3322221 112234568999999762455555567889999
Q ss_pred eCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEccCCCcceEEE
Q 015290 296 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 296 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~ 365 (409)
|+...... ..... .......+++..+ .++.+-.. +.|..+|..+ ++....+
T Consensus 194 d~dG~~~~----~~~~~-------------~~~~P~glav~~~-~lywtd~~~~~V~~~~~~~-G~~~~~i 245 (318)
T 3sov_A 194 NLDGTNRQ----AVVKG-------------SLPHPFALTLFED-ILYWTDWSTHSILACNKYT-GEGLREI 245 (318)
T ss_dssp ETTSCSCE----EEECS-------------CCSCEEEEEEETT-EEEEEETTTTEEEEEETTT-CCSCEEE
T ss_pred cCCCCceE----EEecC-------------CCCCceEEEEeCC-EEEEEecCCCeEEEEECCC-CCceEEE
Confidence 98753210 11111 0123456676533 33333333 8899999864 5544444
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.48 E-value=0.089 Score=51.22 Aligned_cols=120 Identities=8% Similarity=-0.068 Sum_probs=74.8
Q ss_pred cceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC-CCeEEEE
Q 015290 219 FNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-RGFVRLV 295 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~-dg~i~iw 295 (409)
.....|++.+.++.|+.+ ..+.|.+.++. .. ...++ +.........|+++|.+..++.+-.. .+.|...
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~-~~~~l------~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~ 542 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GV-KRKTL------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 542 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETT-SS-SEEEE------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCC-CC-eEEEE------EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEE
Confidence 345678898877666655 78899999987 33 33332 22223457899999975244444322 3678888
Q ss_pred eCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEccCCCcceEEE
Q 015290 296 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 296 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~~~~~~~~~~ 365 (409)
++..... ..+-. ..-.....|++++.+..|+.+. . +.|...++. +.....+
T Consensus 543 ~~dG~~~-----~~lv~------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d--G~~~~~v 595 (791)
T 3m0c_C 543 GLNGVDI-----YSLVT------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTI 595 (791)
T ss_dssp ETTSCCE-----EEEEC------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEE
T ss_pred ecCCCce-----EEEEe------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC--CCceEEE
Confidence 8865432 11111 0023578899998888777775 3 889999986 4444444
No 284
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.47 E-value=0.038 Score=46.80 Aligned_cols=160 Identities=7% Similarity=0.075 Sum_probs=89.3
Q ss_pred cceeEEEecCCcccceeeeeecccc----ccceeEEEeCCCCCeEEE-e---c----CCeEEEEEccCCCceeeeeecCC
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAH----DFNINSISNNSDCETFVS-A---D----DLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~~l~~-~---~----d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
+..|.-|+++. ...+.+.| ..| ...|..-..+++.++++. | . .|.+.||..+ +...+.
T Consensus 125 ~taVyHWs~~~--~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~----- 194 (365)
T 2xzh_A 125 DNAVYHWSMEG--ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQP----- 194 (365)
T ss_dssp SSEEEEEESST--TCCCEEEE-ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT--TTEEEE-----
T ss_pred CCcEEEEcccC--CCCCceee-ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec--ccccce-----
Confidence 45677788765 23455444 333 345667777899998874 3 2 3677899988 333333
Q ss_pred CcCcCccCceEEEEEeCC--CCCEEEEEeC---CCeEEEEeCCCcc-cc-ccccccccccccccCCcccccccccceeee
Q 015290 261 SNMDDLTEVITSAEFHPI--YCNLLAYSSS---RGFVRLVDMRQSA-LC-DHSARILRDAAESHGSKSFFTEIIASISDI 333 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~p~--~~~~l~s~s~---dg~i~iwd~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 333 (409)
+.+|......+.+.-+ ..++|+.+.. .+.++|-++.... .. .-..+..+. ...|. .-.+-..++
T Consensus 195 --ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi-~fppe------a~~DFPVam 265 (365)
T 2xzh_A 195 --IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV-FFPPE------AQNDFPVAM 265 (365)
T ss_dssp --ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEE-CCCTT------CTTCCEEEE
T ss_pred --eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCccccccee-eCCcc------ccCCceEEE
Confidence 5777665444433211 1134444433 2588999885431 00 000011111 00000 012334567
Q ss_pred EeccCCCEEEEeec-CeEEEEEccCCCcceEEEecccCcc
Q 015290 334 KFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLR 372 (409)
Q Consensus 334 ~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 372 (409)
..|+.-..+..-+. |.|++||+.+ +.++..-+-....+
T Consensus 266 qvs~kygviyviTK~G~ihlyDleT-gt~i~~nrIS~d~i 304 (365)
T 2xzh_A 266 QISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETI 304 (365)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCE
T ss_pred EecccCCEEEEEeCCcEEEEEEccc-CcEEEEeccCCCce
Confidence 88887777777776 9999999997 77776655444443
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.46 E-value=0.0044 Score=55.96 Aligned_cols=141 Identities=9% Similarity=0.039 Sum_probs=79.2
Q ss_pred ceeEEEeCC-CCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC-CC----eE
Q 015290 220 NINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-RG----FV 292 (409)
Q Consensus 220 ~v~~l~~~~-~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~-dg----~i 292 (409)
....|+++| ++..|+.+ ..+.|+.+|+. .+...... . .......++|++++ ++|+.+.. ++ .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~-~~~v~~~~-------~-~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v 207 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFE-KEYVSTVY-------S-GLSKVRTICWTHEA-DSMIITNDQNNNDRPNN 207 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETT-TTEEEEEE-------C-CCSCEEEEEECTTS-SEEEEEECCSCTTSEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECC-CCEEEEEe-------c-CCCCcceEEEeCCC-CEEEEEeCCCCcccceE
Confidence 457899998 45566666 44888899987 44333321 1 33457899999999 74444443 22 23
Q ss_pred EEEeCCCccccccccccccccccccCCcccccccccceeeeEecc-CCCEEEEeec-CeEEEEEccCCCcceEEEecccC
Q 015290 293 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEH 370 (409)
Q Consensus 293 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~~~~ 370 (409)
.+++ ..+.... ...+.. ......++++| +|.++++-.. +.|..++... +...........
T Consensus 208 ~~~~-~~g~~~~--~~~l~~--------------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~-~~~~~~~~~~~~ 269 (430)
T 3tc9_A 208 YILT-RESGFKV--ITELTK--------------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT-QETTPLFTIQDS 269 (430)
T ss_dssp EEEE-GGGTSCS--EEEEEE--------------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT-TEEEEEEECSSS
T ss_pred EEEe-CCCceee--eeeecc--------------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC-CcEEEEEEcCCC
Confidence 3333 2222110 011111 12467789999 5655555434 8999999863 332122221111
Q ss_pred cccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 371 LRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 371 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
..+ ..++|+|+|++|..+
T Consensus 270 ~~P--------------~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 270 GWE--------------FHIQFHPSGNYAYIV 287 (430)
T ss_dssp SCC--------------EEEEECTTSSEEEEE
T ss_pred Ccc--------------eeEEEcCCCCEEEEE
Confidence 111 589999999955443
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.46 E-value=0.0014 Score=63.16 Aligned_cols=120 Identities=8% Similarity=-0.019 Sum_probs=67.3
Q ss_pred eeEEEeCCCCCeEEEe--cC-CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeC
Q 015290 221 INSISNNSDCETFVSA--DD-LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDM 297 (409)
Q Consensus 221 v~~l~~~~~~~~l~~~--~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~ 297 (409)
...++++|.+.+|+.+ .. +.|..+++. +....++ ....-.....|+|+|++..++++-+..+.|..+|+
T Consensus 498 P~giavDp~~g~ly~td~~~~~~I~~~~~d--G~~~~~l------~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 498 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSL------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp CCCEECCSSSSCCEECCCSSSCCEEBCCSS--SCCCCEE------SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred cceEEEccCCCcEEEcccCCCCeEEEEeCC--CCCeeEE------EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 4678899876666554 23 677777765 3222221 11122345789999986356666667788999998
Q ss_pred CCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe-ec-CeEEEEEccCCCcceEEEe
Q 015290 298 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMDSTPVATFK 366 (409)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg-~~-~~v~iwd~~~~~~~~~~~~ 366 (409)
..... +.+.. . .........+++..+ .|+.. .. +.|..+|..+ ++.+..+.
T Consensus 570 dG~~~-----~~~~~-~---------~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~-G~~~~~i~ 622 (699)
T 1n7d_A 570 NGGNR-----KTILE-D---------EKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLT-GSDVNLLA 622 (699)
T ss_dssp SSSCC-----EEECC-C---------SSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTT-EEEEECCC
T ss_pred CCCce-----EEEEe-c---------CCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccC-CCceEEee
Confidence 65321 11111 0 000122345666544 44433 34 8999999764 55555553
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.44 E-value=0.057 Score=48.08 Aligned_cols=120 Identities=8% Similarity=-0.059 Sum_probs=73.3
Q ss_pred cceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC-CCeEEEE
Q 015290 219 FNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-RGFVRLV 295 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~-dg~i~iw 295 (409)
.....+++.+.+..|+.+ ..+.|.+.++. ....... +...-.....++++|.+..++.+-.. .+.|...
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~-g~~~~~l-------~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTL-------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTT-TCSEEEE-------EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCC-CCceEEE-------EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEE
Confidence 345788888755555544 67889999887 3332222 12223457899999976244444322 4678888
Q ss_pred eCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEccCCCcceEEE
Q 015290 296 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 296 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~~~~~~~~~~ 365 (409)
++..... ..+-. ..-.....+++++++..|..+. . +.|..+|+. +.....+
T Consensus 231 ~~dG~~~-----~~~~~------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d--G~~~~~~ 283 (400)
T 3p5b_L 231 GLNGVDI-----YSLVT------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTI 283 (400)
T ss_dssp ETTSCSC-----EEEEC------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCCCEEE
T ss_pred eCCCCcc-----EEEEE------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC--CCccEEE
Confidence 8765331 11111 0013578899999888888775 3 889999986 4444333
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.42 E-value=0.018 Score=49.03 Aligned_cols=76 Identities=11% Similarity=0.094 Sum_probs=52.4
Q ss_pred ceeEEEeCCCCCeEEEe-cC-CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeC
Q 015290 220 NINSISNNSDCETFVSA-DD-LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDM 297 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~-~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~ 297 (409)
....++..++|+..+++ .. +.|...+.. +.....+..... ........+.++++|+| ++|+.....|.|..+|+
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pd--G~~~~~~~~~~~-~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSAD--GKTVSTFAWESG-NGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDV 213 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTT--SCCEEEEEECCC-CSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEEC
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCC--CCEEeeeeecCC-CcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcC
Confidence 46889999999999988 66 777666665 333333322211 11223346799999999 77777766999999998
Q ss_pred CC
Q 015290 298 RQ 299 (409)
Q Consensus 298 ~~ 299 (409)
+.
T Consensus 214 ~~ 215 (334)
T 2p9w_A 214 SK 215 (334)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.35 E-value=0.13 Score=50.13 Aligned_cols=120 Identities=10% Similarity=0.007 Sum_probs=68.2
Q ss_pred ceeEEEeCCCCCeEEEe--cC-CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 015290 220 NINSISNNSDCETFVSA--DD-LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 296 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~--~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd 296 (409)
....|+++|.+.+|+.+ .. +.|...++. +....++ +...-.....|++++.+..++++-...+.|...+
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G~~~~~l------v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSL------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 586 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCCEEEE------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecC--CCceEEE------EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 46789999976666654 33 678888887 3333332 2223356789999987624444445567899999
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEccCCCcceEEE
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~~~~~~~~~~ 365 (409)
+...... .+... . ..-....+|++. +.+|+... . +.|...|..+ ++.+..+
T Consensus 587 ~dG~~~~----~v~~~-~----------~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~t-G~~~~~l 639 (791)
T 3m0c_C 587 VNGGNRK----TILED-E----------KRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLT-GSDVNLL 639 (791)
T ss_dssp TTSCSCE----EEEEC-T----------TTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTT-CCCCEEE
T ss_pred cCCCceE----EEecC-C----------CccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCC-CcceEEe
Confidence 8654321 11111 0 001123456654 34555554 3 8888888654 5544444
No 290
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.35 E-value=0.066 Score=46.77 Aligned_cols=27 Identities=30% Similarity=0.496 Sum_probs=21.2
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEe
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFE 60 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~ 60 (409)
.....|+|.|+|++++ +..+|.|.+++
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d 55 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS 55 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe
Confidence 4568999999998554 56679999887
No 291
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.31 E-value=0.082 Score=47.07 Aligned_cols=121 Identities=7% Similarity=-0.021 Sum_probs=67.8
Q ss_pred ceeEEEeCCCCCeEEEe--c-CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 015290 220 NINSISNNSDCETFVSA--D-DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 296 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~--~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd 296 (409)
....|+++|.+..|+.+ . .+.|...++. +.....+ ....-.....|+++|++..++.+-...+.|..+|
T Consensus 203 ~P~~iavdp~~g~ly~td~~~~~~I~~~~~d--G~~~~~~------~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d 274 (400)
T 3p5b_L 203 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSL------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 274 (400)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCCEEEEETT--SCSCEEE------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcceEEEecccCeEEEEeCCCCCEEEEEeCC--CCccEEE------EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEe
Confidence 45789999976666654 2 4678888877 3322221 1222346789999988724444445567899999
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEE-Eeec-CeEEEEEccCCCcceEEEe
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL-SRDY-MNLKLWDIRMDSTPVATFK 366 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-sg~~-~~v~iwd~~~~~~~~~~~~ 366 (409)
+..... +.+.. . .+.......+++. +..|. +-.. +.|..+|..+ ++.+..+.
T Consensus 275 ~dG~~~-----~~~~~-~---------~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~-G~~~~~i~ 328 (400)
T 3p5b_L 275 VNGGNR-----KTILE-D---------EKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLT-GSDVNLLA 328 (400)
T ss_dssp TTSCCC-----EEEEE-C---------SSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSS-CCCCEEEE
T ss_pred CCCCcc-----EEEEe-C---------CCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCC-CCceEEEe
Confidence 865432 11111 0 0001234466663 33444 3334 8888888654 54444443
No 292
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.29 E-value=0.2 Score=51.09 Aligned_cols=34 Identities=9% Similarity=0.027 Sum_probs=28.0
Q ss_pred CCcEEEEEECCC------CCEEEEEec-CCeEEEEeccCCc
Q 015290 32 VDIVSAIEFDKT------GDYLAVGDR-GGRVILFETVGGK 65 (409)
Q Consensus 32 ~~~v~~v~~~~~------~~~la~~~~-dg~i~iw~~~~~~ 65 (409)
.+.|.|+++.|. ++++|+|.. |++|+|+++.+.+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 457999999873 479999996 9999999998643
No 293
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.28 E-value=0.049 Score=47.98 Aligned_cols=125 Identities=12% Similarity=0.143 Sum_probs=77.4
Q ss_pred ceeEEEeCCCCCeEEEecCCeEEEEEccCCCc-----------eeeeeecCCCcCcCccCceEEEEEeCCCC--CEEEEE
Q 015290 220 NINSISNNSDCETFVSADDLRINLWNLEISDQ-----------CFNIVDMKPSNMDDLTEVITSAEFHPIYC--NLLAYS 286 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~l~s~ 286 (409)
.|..+..+|+|++||...+..|.|-.+..... ..+.+.+.+.+ ......|..+.|+|-+. ..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~-~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEE-VGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC---CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcc-cCCCCceeEEEeccccCCCCeEEEE
Confidence 56779999999999988777899888872110 01123222211 11357899999999863 388889
Q ss_pred eCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEE--eec-CeEEE
Q 015290 287 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS--RDY-MNLKL 352 (409)
Q Consensus 287 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s--g~~-~~v~i 352 (409)
..|+.|++||+...... +. .+.. .. ..-.+......|.+++|.+++-.|.. .+. |.|+-
T Consensus 146 tsD~~Ir~yDl~~s~~~--P~-~L~k-~~---~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEK--PI-VLNK-PN---NSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTSC--CE-EESC-CC---SEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCCC--Cc-chhc-cc---cccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999863211 11 2221 00 00011223367889999998765544 334 77654
No 294
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.28 E-value=0.086 Score=46.59 Aligned_cols=210 Identities=8% Similarity=0.108 Sum_probs=114.3
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeecccccccceeEEEecCC
Q 015290 124 APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGN 203 (409)
Q Consensus 124 s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 203 (409)
+|..+.++.-. ..++.|+|+++....+...+.- ..++.-..++..- ....+..|.-|+++.
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~~~e-------------~VvfWkWis~~~l-----~lVT~taVyHWsi~~ 134 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-------------DVTFWKWISLNTV-----ALVTDNAVYHWSMEG 134 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-------------CCCEEEEEETTEE-----EEECSSEEEEEESSS
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-------------CceEEEecCCCeE-----EEEcCCeeEEecccC
Confidence 35555665554 5788888888876655433211 0111000000000 112255788888875
Q ss_pred cccceeeeeecccc----ccceeEEEeCCCCCeEEE-e---c----CCeEEEEEccCCCceeeeeecCCCcCcCccCceE
Q 015290 204 SVHARCQKVYPHAH----DFNINSISNNSDCETFVS-A---D----DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 271 (409)
Q Consensus 204 ~~~~~~~~~~~~~~----~~~v~~l~~~~~~~~l~~-~---~----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 271 (409)
...+.+.| ..| ...|..-..+++.++++. | . .|.+.+|..+ +...+. +.+|.....
T Consensus 135 --~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~-------ieGhaa~F~ 202 (494)
T 1bpo_A 135 --ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQP-------IEGHAASFA 202 (494)
T ss_dssp --SCCCEEEE-ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST--TCCEEE-------ECCSEEEEE
T ss_pred --CCCchhhe-ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc--ccccch-------heeeeeeeE
Confidence 23455554 333 345667777899998874 3 2 4677899988 333333 578876655
Q ss_pred EEEEeCCC--CCEEEEEeC---CCeEEEEeCCCccccc--cccccccccccccCCcccccccccceeeeEeccCCCEEEE
Q 015290 272 SAEFHPIY--CNLLAYSSS---RGFVRLVDMRQSALCD--HSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 344 (409)
Q Consensus 272 ~~~~~p~~--~~~l~s~s~---dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 344 (409)
.+.+.-+. .++|+.+.. .+.++|.++....... -..+..+. ...|. .-.+-..++..|+.-..+..
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv-~fppe------~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV-FFPPE------AQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEEC-CCCTT------STTCCEEEEEEETTTTEEEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeee-eCCcc------cccCceeEEEecccCCEEEE
Confidence 54443211 134555544 3789999985431000 00011111 00000 01233456888888777777
Q ss_pred eec-CeEEEEEccCCCcceEEEecccCcc
Q 015290 345 RDY-MNLKLWDIRMDSTPVATFKIHEHLR 372 (409)
Q Consensus 345 g~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 372 (409)
-+. |.|++||+.+ +.++..-+-....+
T Consensus 276 iTK~G~i~lyDleT-gt~i~~nrIs~~~i 303 (494)
T 1bpo_A 276 ITKYGYIHLYDLET-GTCIYMNRISGETI 303 (494)
T ss_dssp EETTSEEEEEETTT-CCEEEEEECCSSCE
T ss_pred EecCceEEEEeccc-ceeeeeecccCCce
Confidence 776 9999999997 77776655444443
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.24 E-value=0.0075 Score=58.07 Aligned_cols=111 Identities=7% Similarity=-0.045 Sum_probs=64.9
Q ss_pred eeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC-CeEEEEeC
Q 015290 221 INSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-GFVRLVDM 297 (409)
Q Consensus 221 v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-g~i~iwd~ 297 (409)
...|++.+.+..|+.+ ..+.|.++++. ... ..++ +.........++++|.+..++++-... +.|.++++
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~d-g~~-~~~l------~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~ 526 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVK-RKTL------FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 526 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSS-SCC-EEEE------CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecC-CCc-eEEE------EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence 3567888655555544 67889999887 332 2222 121223457889998762444443222 67777776
Q ss_pred CCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 298 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
..... +.+.. ..-...+.|+|+|++..|..+. . +.|..+++.
T Consensus 527 dG~~~-----~~l~~------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 527 NGVDI-----YSLVT------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp SSCCC-----CEESC------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred CCCCe-----eEEEe------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 54321 11111 0013467899999877776664 3 889999986
No 296
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.22 E-value=0.14 Score=47.96 Aligned_cols=29 Identities=7% Similarity=0.094 Sum_probs=23.8
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeeeecc
Q 015290 127 GSMFILSTNDKTIKLWKVRDQKVKKIKEM 155 (409)
Q Consensus 127 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 155 (409)
+..++.++.|+.+..+|..+++.......
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 143 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEV 143 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecC
Confidence 45788888899999999999988776543
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.22 E-value=0.1 Score=47.51 Aligned_cols=124 Identities=16% Similarity=0.084 Sum_probs=68.1
Q ss_pred ceeEEEe-------CCCCCeEEEe-cCC-------eEEEEEccCCCcee-----eeeecCCCcCcCccCceEEEEEeCCC
Q 015290 220 NINSISN-------NSDCETFVSA-DDL-------RINLWNLEISDQCF-----NIVDMKPSNMDDLTEVITSAEFHPIY 279 (409)
Q Consensus 220 ~v~~l~~-------~~~~~~l~~~-~d~-------~i~lwd~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~p~~ 279 (409)
....++| +++++.|+++ ..+ .|.+.+....+... ..+ ... .....++++|++
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v-------~~~-~~p~giavdp~~ 258 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLI-------AAY-KQCNGATIHPIN 258 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEE-------EEE-SCCCCEEECTTT
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceee-------ccC-CCceEEEEcCCC
Confidence 4678999 9999977666 332 25566544212221 121 111 234577889955
Q ss_pred CCEEEEEeCCCeEEEEeCC-------CccccccccccccccccccCCcccc-cccccceeeeEeccCCCEEEEee-c-Ce
Q 015290 280 CNLLAYSSSRGFVRLVDMR-------QSALCDHSARILRDAAESHGSKSFF-TEIIASISDIKFANDGQHLLSRD-Y-MN 349 (409)
Q Consensus 280 ~~~l~s~s~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~g~~l~sg~-~-~~ 349 (409)
..++++-..++.|..+|+. ++... .+...... . .....+ .+.......++|+|+|++|..+. . ..
T Consensus 259 g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~-tp~~~~~~---g-~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~ 333 (496)
T 3kya_A 259 GELYFNSYEKGQVFRLDLVDYFKTIKNGGSW-DPIVKNNP---N-TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHY 333 (496)
T ss_dssp CCEEEEETTTTEEEEECHHHHHHHHHTTCCC-CCBGGGCT---T-TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred CeEEEEECCCCEEEEEecccccccccCceee-cccccccc---c-ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCE
Confidence 3667777788889999987 43320 00000000 0 000000 00123457899999999766664 3 88
Q ss_pred EEEEEcc
Q 015290 350 LKLWDIR 356 (409)
Q Consensus 350 v~iwd~~ 356 (409)
|+.++..
T Consensus 334 I~kid~d 340 (496)
T 3kya_A 334 FMRSDYD 340 (496)
T ss_dssp EEEEEEE
T ss_pred EEEEecC
Confidence 9887764
No 298
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.20 E-value=0.036 Score=47.22 Aligned_cols=173 Identities=9% Similarity=0.006 Sum_probs=94.5
Q ss_pred ccccceeEEEeCCC-CCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCc-cCceEEEEE---eCCCCCEEEEEe--
Q 015290 216 AHDFNINSISNNSD-CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL-TEVITSAEF---HPIYCNLLAYSS-- 287 (409)
Q Consensus 216 ~~~~~v~~l~~~~~-~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~---~p~~~~~l~s~s-- 287 (409)
.......+++|++. +.++++. ..++|..||.. .+....+ ........+- ...+..+.| .|++ .++++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~-~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~ 86 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPK-TQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNA 86 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTT-TCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEET
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCC-CCeEEEE-ecCCccccCCCcceeeEEEEeccCCCC-cEEEEEccc
Confidence 33444567899875 4455555 89999999987 3433332 1111000011 124579999 6887 7777543
Q ss_pred -----------CCCeEEEEeCC---CccccccccccccccccccCCcccccc-cccceeeeEeccCCCEEEEee-c-CeE
Q 015290 288 -----------SRGFVRLVDMR---QSALCDHSARILRDAAESHGSKSFFTE-IIASISDIKFANDGQHLLSRD-Y-MNL 350 (409)
Q Consensus 288 -----------~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~s~~g~~l~sg~-~-~~v 350 (409)
.+..|..||+. +++.. ........... .....+ -......++..++|+.-++++ . +.|
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~----~~~dL~~~~~~-~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I 161 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPV----WSVNFEKVQDE-FEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI 161 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCS----EEEESHHHHHH-HHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEE----EEecCcccccc-ccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence 26789999998 55432 11111000000 000000 012478999999999888776 4 555
Q ss_pred EEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEcccCCC
Q 015290 351 KLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYRRD 407 (409)
Q Consensus 351 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~s~dg~ 407 (409)
...+. +++.+..+........ .......++++|||..|+....+|.
T Consensus 162 ~rV~p--dG~~~~~~~~~~~~~~---------~~~G~nGIv~~pdg~~Liv~~~~g~ 207 (334)
T 2p9w_A 162 ARVSA--DGKTVSTFAWESGNGG---------QRPGYSGITFDPHSNKLIAFGGPRA 207 (334)
T ss_dssp EEECT--TSCCEEEEEECCCCSS---------SCCSCSEEEEETTTTEEEEESSSSS
T ss_pred EEEeC--CCCEEeeeeecCCCcc---------cccCcceEEEeCCCCEEEEEcCCCe
Confidence 55554 3665544432221100 0111258999999988877655654
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.14 E-value=0.18 Score=47.72 Aligned_cols=111 Identities=8% Similarity=0.032 Sum_probs=69.9
Q ss_pred ceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEE-eCCCeEEEEe
Q 015290 220 NINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLVD 296 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-s~dg~i~iwd 296 (409)
....+++.+.+..|+.+ ..+.|.+.++. .. ...++ ....-.....++++|....++.+- +..+.|...+
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~-~~~~l------~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~ 152 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLD-GQ-HRQVL------VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAA 152 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETT-ST-TCEEE------ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecC-CC-cEEEE------EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEe
Confidence 35678888766666554 67889999987 32 22222 112234568999998651444443 2356777777
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
+...... .+... -.....++++++++.|..+. . +.|...|+.
T Consensus 153 ~dG~~~~----~l~~~--------------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 153 MDGSERT----TLVPN--------------VGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp TTSCSCE----EEECS--------------CSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCceE----EEECC--------------CCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 7654321 11111 24578899999888888775 3 899999986
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.10 E-value=0.16 Score=46.27 Aligned_cols=71 Identities=8% Similarity=0.003 Sum_probs=44.4
Q ss_pred eeEEEeCCCCCeEE-Ee-cCCeEEEEEccC------CCce-----------e-eeeecCCCcCcCccCceEEEEEeCCCC
Q 015290 221 INSISNNSDCETFV-SA-DDLRINLWNLEI------SDQC-----------F-NIVDMKPSNMDDLTEVITSAEFHPIYC 280 (409)
Q Consensus 221 v~~l~~~~~~~~l~-~~-~d~~i~lwd~~~------~~~~-----------~-~~~~~~~~~~~~~~~~v~~~~~~p~~~ 280 (409)
...++++|++..|+ +- .++.|..+|+.. .+.. . ..+. . +.....+.++|+|+|
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~-----~-~~~~~p~~ia~~p~G- 321 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFT-----I-ADPSWEFQIFIHPTG- 321 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEE-----C-SSSSCCEEEEECTTS-
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEe-----c-CCCCCceEEEEcCCC-
Confidence 35678999655555 55 788999999861 1221 1 1110 1 123456899999999
Q ss_pred CE-EEEEeCCCeEEEEeCC
Q 015290 281 NL-LAYSSSRGFVRLVDMR 298 (409)
Q Consensus 281 ~~-l~s~s~dg~i~iwd~~ 298 (409)
++ +++-+....|+.++..
T Consensus 322 ~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 322 KYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp SEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEeCCCCEEEEEecC
Confidence 74 5555567788886653
No 301
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.06 E-value=0.21 Score=46.96 Aligned_cols=78 Identities=13% Similarity=0.108 Sum_probs=45.8
Q ss_pred EEeCCCCCeEEEe-cC----------------CeEEEEEccCCCceeeeeecCCCc---CcCccCceEEEEEe-CCCC--
Q 015290 224 ISNNSDCETFVSA-DD----------------LRINLWNLEISDQCFNIVDMKPSN---MDDLTEVITSAEFH-PIYC-- 280 (409)
Q Consensus 224 l~~~~~~~~l~~~-~d----------------~~i~lwd~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~-p~~~-- 280 (409)
+++.++...++.+ .+ +.|.-+|.. +++.+-.+...... +.....++ -+... .+|.
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~-TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~ 323 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDAD-TGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKAR 323 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETT-TCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCC-CCceeeEeecCCCccccccCCCccE-EEeccccCCcEE
Confidence 4556667777776 44 378889988 66665544322110 01111222 12222 4552
Q ss_pred CEEEEEeCCCeEEEEeCCCcccc
Q 015290 281 NLLAYSSSRGFVRLVDMRQSALC 303 (409)
Q Consensus 281 ~~l~s~s~dg~i~iwd~~~~~~~ 303 (409)
..++.++.+|.+.++|.+++++.
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEEECCCcEEEEEECCCCCEe
Confidence 35777889999999999998753
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.06 E-value=0.11 Score=44.60 Aligned_cols=105 Identities=4% Similarity=0.058 Sum_probs=61.1
Q ss_pred CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEE--eCCCCC-EEEEEeCCCeEEEEeCC---Ccccccccccccc
Q 015290 238 DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEF--HPIYCN-LLAYSSSRGFVRLVDMR---QSALCDHSARILR 311 (409)
Q Consensus 238 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~-~l~s~s~dg~i~iwd~~---~~~~~~~~~~~~~ 311 (409)
+++|.+|++......+..+......+..-...++.+++ +|.+.. +++....+|.+..|++. .+....+.++.+.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 68999998741222343321000000011145667777 775423 67777888999999884 3322222234444
Q ss_pred ccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEcc
Q 015290 312 DAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIR 356 (409)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~ 356 (409)
. .+.+..+...+....|..+.+ ..|..++.+
T Consensus 178 l--------------gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 178 M--------------NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp C--------------SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred C--------------CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 4 346788999998888888875 446666654
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.99 E-value=0.091 Score=46.32 Aligned_cols=164 Identities=12% Similarity=0.077 Sum_probs=95.7
Q ss_pred EeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccc
Q 015290 225 SNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCD 304 (409)
Q Consensus 225 ~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~ 304 (409)
....++..++.+.++.||.-++. .+..++.+..+.. ---..+..+..+|+| .+||..+. ..|.|-.+..+....
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~-~~~~Yk~L~~~~~---i~f~~i~qlvlSpsG-~lLAl~g~-~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVL-TDSLYHSLNFSRH---LVLDDTFHVISSTSG-DLLCLFND-NEIFVMEVPWGYSNV 100 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETT-TCSSCEEEECTTT---CCCCTTCEEEECTTS-SEEEEECS-SEEEEEECCTTCSCC
T ss_pred EEEcCCCEEEEEECCEEEEEECC-CCCcceEEecCcc---cccCceeEEEECCCC-CEEEEecC-CeEEEEEecCccccC
Confidence 34567888888878899988887 3444555432210 011246789999999 98888754 478998887432111
Q ss_pred cc------c--ccccccccccCCcccccccccceeeeEeccCC---CEEEEe-ecCeEEEEEccCC-CcceEEEecccCc
Q 015290 305 HS------A--RILRDAAESHGSKSFFTEIIASISDIKFANDG---QHLLSR-DYMNLKLWDIRMD-STPVATFKIHEHL 371 (409)
Q Consensus 305 ~~------~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g---~~l~sg-~~~~v~iwd~~~~-~~~~~~~~~~~~~ 371 (409)
.. + +.+.. ++. -.....+|.++.|+|-| ..|++- +|+.||+||+... .++. .++.....
T Consensus 101 ~~~~~~~~~q~~ty~l---~~~----~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~ 172 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSI---DEE----EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNS 172 (452)
T ss_dssp CCHHHHHTTEEEEEEG---GGC----C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSE
T ss_pred cccccccccceeEEEc---CCc----ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccc
Confidence 00 0 11111 000 01124689999999964 356665 5699999999852 2333 44421110
Q ss_pred ccccccccCCCCccceeeEEEcCCCCeEEE--cccCCCC
Q 015290 372 RPKLCDLYNNDSIFDKFECSVSGDGLHFAT--GSYRRDN 408 (409)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~s--~s~dg~i 408 (409)
+......-.|.+++|.++|-.|.. .+.+|.|
T Consensus 173 ------fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 173 ------FGLDARVNDITDLEFSKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp ------EESCSSCCCEEEEEECTTSSCEEEEECTTSCEE
T ss_pred ------cCCCcccceEEEEEEcCCCcEEEEEecCCCCCE
Confidence 011122234579999998876665 4466654
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.92 E-value=0.28 Score=46.10 Aligned_cols=29 Identities=21% Similarity=0.205 Sum_probs=23.8
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeeeecc
Q 015290 127 GSMFILSTNDKTIKLWKVRDQKVKKIKEM 155 (409)
Q Consensus 127 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 155 (409)
+..++.++.|+.|..+|..+++.......
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 44788888999999999999998876553
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.88 E-value=0.19 Score=43.61 Aligned_cols=111 Identities=11% Similarity=0.129 Sum_probs=63.7
Q ss_pred ceeEEEeCCCCCeEEEec----C------------CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEE
Q 015290 220 NINSISNNSDCETFVSAD----D------------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLL 283 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~~----d------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 283 (409)
..+.+.+.++|.++++.. | ..=.+|.+. .+. ... +...-...+.++|+||+ +.|
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d-~~~-~~~-------~~~~l~~pNGia~spDg-~~l 235 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS-PND-VRV-------VAEGFDFANGINISPDG-KYV 235 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC-TTC-CEE-------EEEEESSEEEEEECTTS-SEE
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE-CCe-EEE-------eecCCcccCcceECCCC-CEE
Confidence 467888888888776641 1 122344443 222 222 11122456899999999 655
Q ss_pred EEE-eCCCeEEEEeCCC-ccccccccccccccccccCCcccccccccceeeeEecc-CCCEEEEee-c-CeEEEEEcc
Q 015290 284 AYS-SSRGFVRLVDMRQ-SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 284 ~s~-s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~sg~-~-~~v~iwd~~ 356 (409)
+.+ +..+.|..|++.. +++.. .+.+.. ....-.+++.+ +|++.+++. + +.|..|+..
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~--~~~~~~--------------~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTP--LRVLSF--------------DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEE--EEEEEC--------------SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEeCCCCeEEEEEECCCCcEec--CEEEeC--------------CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 554 5678999999864 22211 122211 24567789999 598777653 4 555555543
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.87 E-value=0.06 Score=47.00 Aligned_cols=113 Identities=14% Similarity=0.072 Sum_probs=61.2
Q ss_pred ceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCC---CCCEEEEEeCC-----Ce
Q 015290 220 NINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI---YCNLLAYSSSR-----GF 291 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~s~d-----g~ 291 (409)
....++|.|+|+++++-.++.|.+++ . +.......++ ...........++++|+ +..++++-... +.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~-~--g~~~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR-E--GRLSTYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE-T--TEEEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE-C--CCccEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 46789999999865555669999998 3 2222111111 11222356789999998 41444443332 56
Q ss_pred EEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 292 VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 292 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
|..|+...+... ....++.. -+.. .-..| ....++|.|||.+.++-
T Consensus 107 v~r~~~~~~~~~-~~~~l~~~---~p~~--~~~~h--~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 107 VVRLRHLGERGV-LDRVVLDG---IPAR--PHGLH--SGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEECSSCEE-EEEEEEEE---ECCC--TTCCC--CCCCEEECTTSCEEEEC
T ss_pred EEEEEeCCCCcC-ceEEEEEe---CCCC--CCCCc--CCceEEECCCCCEEEEE
Confidence 778887643210 00011111 0000 00112 24689999999766664
No 307
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.80 E-value=0.36 Score=45.64 Aligned_cols=113 Identities=12% Similarity=0.049 Sum_probs=69.8
Q ss_pred cceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEE-eCCCeEEEE
Q 015290 219 FNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLV 295 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-s~dg~i~iw 295 (409)
.....+++.+.+..|+.+ ..+.|.+.++. +....++ ....-.....|+++|.+..++.+- +..+.|...
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d--G~~~~~l------~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~ 155 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLD--GSLRKVL------FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERA 155 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEE------ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECC--CCCEEEE------EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEE
Confidence 346789999866666655 78899999988 3333232 112234467899999752444443 224567666
Q ss_pred eCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEcc
Q 015290 296 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIR 356 (409)
Q Consensus 296 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~ 356 (409)
++..... ..+-. ..-.....+++++++..|..+. . +.|...|+.
T Consensus 156 ~~dG~~~-----~~l~~------------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 156 GMDGSSR-----FIIIN------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp ETTSCSC-----EEEEC------------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred ECCCCce-----EEEEe------------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 7654321 11111 0023568899999888777775 3 888888886
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.75 E-value=0.39 Score=45.40 Aligned_cols=204 Identities=8% Similarity=-0.009 Sum_probs=112.0
Q ss_pred CCcEEEEEECCCCCEEEEEe-cCCeEEEEeccCCcCCCCccchhhhhhhcccccccCCCceeeeeeecCCCccccccccc
Q 015290 32 VDIVSAIEFDKTGDYLAVGD-RGGRVILFETVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSL 110 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 110 (409)
......|+|++.+..|..+. ..+.|..++.++... ....+...-
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~--------------------------~~~v~~~~~--------- 83 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES--------------------------VQNVVVSGL--------- 83 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------------------CEEEECSSC---------
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc--------------------------eEEEEeCCC---------
Confidence 45678999999666666554 457788888765421 011122111
Q ss_pred eeccceEEEEEEecCCCCEEEEE-eCCCeEEEEEcCCceeeeeeccCCCcccccccccccccCceeccCCCCCceeeccc
Q 015290 111 EIEEKINRVRWCAAPNGSMFILS-TNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 189 (409)
Q Consensus 111 ~~~~~v~~l~~~~s~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
.....|++ ++.+..|+.+ ...+.|.+.++.+.....+.
T Consensus 84 ---~~P~GlAv--D~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~------------------------------------ 122 (619)
T 3s94_A 84 ---LSPDGLAC--DWLGEKLYWTDSETNRIEVSNLDGSLRKVLF------------------------------------ 122 (619)
T ss_dssp ---SCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEE------------------------------------
T ss_pred ---CCcCeEEE--EecCCEEEEEeCCCCEEEEEECCCCCEEEEE------------------------------------
Confidence 35778888 5655555544 56688888888754322221
Q ss_pred ccccceeEEEecCCcccceeeeeeccccccceeEEEeCCCCCeEEEe-c--CCeEEEEEccCCCceeeeeecCCCcCcCc
Q 015290 190 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D--DLRINLWNLEISDQCFNIVDMKPSNMDDL 266 (409)
Q Consensus 190 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~--d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 266 (409)
...-.....|++.|.+..|+.+ . .+.|...++. +.....+ ....
T Consensus 123 -------------------------~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d--G~~~~~l------~~~~ 169 (619)
T 3s94_A 123 -------------------------WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFII------INSE 169 (619)
T ss_dssp -------------------------CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEE------ECSS
T ss_pred -------------------------eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC--CCceEEE------EeCC
Confidence 1112235678999875555554 2 4566666665 3333222 1222
Q ss_pred cCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 267 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 267 ~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
-.....+++++++.+++.+-...+.|...|+...... ..... .......+++..+ .|....
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~----~~~~~-------------~~~~P~gi~~~~~--~ly~td 230 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ----AVVKG-------------SLPHPFALTLFED--ILYWTD 230 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC--------------------------CCCEEESSS--EEEEEC
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccE----EEEeC-------------CCCCceEEEEeCC--EEEEec
Confidence 3467899999976244445456678888888654321 11111 0112346777655 555543
Q ss_pred -c-CeEEEEEccCCCcceEE
Q 015290 347 -Y-MNLKLWDIRMDSTPVAT 364 (409)
Q Consensus 347 -~-~~v~iwd~~~~~~~~~~ 364 (409)
. +.|...|..+ ++....
T Consensus 231 ~~~~~V~~~d~~t-g~~~~~ 249 (619)
T 3s94_A 231 WSTHSILACNKYT-GEGLRE 249 (619)
T ss_dssp TTTCSEEEEESSS-CCCCEE
T ss_pred CCCCEEEEEECCC-CcccEE
Confidence 3 8888888765 443333
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.73 E-value=0.07 Score=46.60 Aligned_cols=113 Identities=14% Similarity=0.062 Sum_probs=60.9
Q ss_pred cceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCC---CCCEEEEEeC---C---
Q 015290 219 FNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI---YCNLLAYSSS---R--- 289 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~s~---d--- 289 (409)
.....|+|.|+|+++++-.++.|.+++.. +. .....++ ...........|+++|+ +..++++-+. +
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~--G~-~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISPS--GK-KLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECSS--CE-EEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeCC--Cc-eEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 44678999999985555566999988743 43 2111111 01122345789999997 4144444332 3
Q ss_pred -CeEEEEeCCCccccccccc-cccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 290 -GFVRLVDMRQSALCDHSAR-ILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 290 -g~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
+.|..|+...........+ ++.. -+. -..| ....++|.|||.+.++-
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~---~~~----~~~h--~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDG---IPG----AYIH--NGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEE---EEC----CSSC--CCCCEEECTTSCEEEEC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEc---CCC----CCCc--CCceEEECCCCcEEEEE
Confidence 5677777654310000001 1111 000 0112 34679999999877664
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.63 E-value=0.3 Score=42.52 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=22.8
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEecc
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETV 62 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~ 62 (409)
.....|+|.|+|++|+++...|.|++++..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence 346899999999834455678999998854
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.47 E-value=0.37 Score=41.65 Aligned_cols=116 Identities=10% Similarity=0.001 Sum_probs=63.7
Q ss_pred ccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCC----CCCEEEEE--eCCC
Q 015290 218 DFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI----YCNLLAYS--SSRG 290 (409)
Q Consensus 218 ~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~~l~s~--s~dg 290 (409)
-.....|+|.|+|..+++- ..|.|++++.. .+.......+.. ...........|+++|+ + .+.++- ..++
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~-~g~~~~v~~~~~-v~~~g~~GllGia~~Pdf~~~g-~lYv~yt~~~~~ 107 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAK-TGRKTELGEVPG-VSPSGEGGLLGIALSPDYASDH-MVYAYFTSASDN 107 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEEECTT-CCCBTTBSEEEEEECTTHHHHC-EEEEEEECSSSE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECC-CCcEeeecccCc-eeecCCCCceeeEeccccccCC-EEEEEEecCCCC
Confidence 3456899999999987777 59999999865 333222211111 12223456789999995 4 343332 2345
Q ss_pred eEEEEeCCCccc----cccccccccccccccCCcccccccccceeeeEeccCCCEEEEe
Q 015290 291 FVRLVDMRQSAL----CDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 345 (409)
Q Consensus 291 ~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg 345 (409)
.|.-|....+.. ......++.. .+. -..| .-..++|.|||.+.++.
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~---~p~----~~~H--~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRG---IPK----GVIH--NGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEE---ECC----CSSC--CCCCEEECTTSCEEEEC
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEc---CCC----CCCc--cCccccCCCCCCEEEEE
Confidence 566666554211 0000111111 000 0122 35679999999877664
No 312
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.46 E-value=0.37 Score=41.48 Aligned_cols=128 Identities=11% Similarity=0.147 Sum_probs=75.4
Q ss_pred ceeEEEe--CCC-CC-eEEEe-cCCeEEEEEccC------CCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC
Q 015290 220 NINSISN--NSD-CE-TFVSA-DDLRINLWNLEI------SDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS 288 (409)
Q Consensus 220 ~v~~l~~--~~~-~~-~l~~~-~d~~i~lwd~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~ 288 (409)
.+..+++ +|. ++ +++.. .+|.+..|++.. ..+.++.+. ..+.+..+..++.. ..|+.+-.
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~--------lgsq~EgcvvDd~~-g~Lyv~eE 199 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK--------MNSQTEGMAADDEY-GRLYIAEE 199 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE--------CSSCEEEEEEETTT-TEEEEEET
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec--------CCCCcceEEEcCCC-CeEEEecc
Confidence 3455666 664 44 45555 889999999842 123334332 12467889999887 78888888
Q ss_pred CCeEEEEeCCCcccc-ccccccccccccccCCcccccccccceeeeEe--ccCCC-EEEEee--cCeEEEEEccCCCcce
Q 015290 289 RGFVRLVDMRQSALC-DHSARILRDAAESHGSKSFFTEIIASISDIKF--ANDGQ-HLLSRD--YMNLKLWDIRMDSTPV 362 (409)
Q Consensus 289 dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~g~-~l~sg~--~~~v~iwd~~~~~~~~ 362 (409)
+.-|..+|.+..... ...+..+.. ..-...+..|++ .++++ ||++.+ +++..+||.....+.+
T Consensus 200 d~GIw~~da~p~~~~~~~~v~~~~~-----------g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 200 DEAIWKFSAEPDGGSNGTVIDRADG-----------RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV 268 (355)
T ss_dssp TTEEEEEECSTTSCSCCEEEEEBSS-----------SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred cceEEEEeCCcCCCCCceEEEEecC-----------CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence 876666665422100 000111111 001235777777 56666 677665 3899999996336777
Q ss_pred EEEec
Q 015290 363 ATFKI 367 (409)
Q Consensus 363 ~~~~~ 367 (409)
..|.-
T Consensus 269 g~f~I 273 (355)
T 3amr_A 269 ADFRI 273 (355)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77753
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.45 E-value=0.9 Score=46.37 Aligned_cols=113 Identities=9% Similarity=0.127 Sum_probs=64.0
Q ss_pred ccccceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEE
Q 015290 216 AHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLV 295 (409)
Q Consensus 216 ~~~~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 295 (409)
..++.+++++-- +| +|++|....|++|++. .++.+.. + .... ..+..+.....+ ++++.|..-..+.++
T Consensus 883 ~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~-~~~~L~~-~-----~~~~-~~i~~~~l~~~~-~~I~vgD~~~Sv~~~ 951 (1158)
T 3ei3_A 883 EVKGAVYSMVEF-NG-KLLASINSTVRLYEWT-TEKELRT-E-----CNHY-NNIMALYLKTKG-DFILVGDLMRSVLLL 951 (1158)
T ss_dssp EESSCEEEEEEE-TT-EEEEEETTEEEEEEEC-TTSCEEE-E-----EEEC-CCSCEEEEEEET-TEEEEEESSBCEEEE
T ss_pred EcCCcCEEEeee-CC-EEEEEcCCEEEEEECC-CCceEEE-E-----eecc-ccEEEEEEeccC-CEEEEEEhhheEEEE
Confidence 345678877643 24 7888877899999998 3333321 0 0111 112233333345 788888776666665
Q ss_pred eCC--CccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec-CeEEEEEcc
Q 015290 296 DMR--QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIR 356 (409)
Q Consensus 296 d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~-~~v~iwd~~ 356 (409)
..+ .+++ ..+.. + .+..+++++.|-.++ .++.++. |.+.+....
T Consensus 952 ~y~~~~~~L-----~~~a~---D--------~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~ 998 (1158)
T 3ei3_A 952 AYKPMEGNF-----EEIAR---D--------FNPNWMSAVEILDDD-NFLGAENAFNLFVCQKD 998 (1158)
T ss_dssp EEETTTTEE-----EEEEE---C--------CSCBCEEEEEEEETT-EEEEEETTSEEEEEEEC
T ss_pred EEEcCCCeE-----EEEEe---e--------cccccEEEEEEEccC-cEEEEcCCCcEEEEecC
Confidence 433 3221 22222 0 113478888887654 5556664 999998765
No 314
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.45 E-value=0.15 Score=44.56 Aligned_cols=78 Identities=6% Similarity=-0.037 Sum_probs=43.8
Q ss_pred cceeEEEeCCCCC-eEEEecCCeEEEEEccCCCceeeee-ecCCCcCcCccCceEEEEEeCC---CCCEEEEEeC-----
Q 015290 219 FNINSISNNSDCE-TFVSADDLRINLWNLEISDQCFNIV-DMKPSNMDDLTEVITSAEFHPI---YCNLLAYSSS----- 288 (409)
Q Consensus 219 ~~v~~l~~~~~~~-~l~~~~d~~i~lwd~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~s~----- 288 (409)
.....|+|.|+|+ ++++-..|.|++++.. +.....+ .++ ............++++|+ +..+.++-+.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~-~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG--KGLSAPLSGVP-DVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT--TEECCCCBSCC-CCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC--CceeeEecCCc-ccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 3467899999998 5554477999998854 3221111 111 001122345789999995 3144444332
Q ss_pred --CCeEEEEeCCC
Q 015290 289 --RGFVRLVDMRQ 299 (409)
Q Consensus 289 --dg~i~iwd~~~ 299 (409)
...|..|++..
T Consensus 95 ~~~~~v~r~~~~~ 107 (353)
T 2g8s_A 95 KAGTAVGYGRLSD 107 (353)
T ss_dssp CEEEEEEEEEECT
T ss_pred CceeEEEEEEECC
Confidence 23566666643
No 315
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.40 E-value=0.19 Score=51.44 Aligned_cols=153 Identities=7% Similarity=0.118 Sum_probs=82.9
Q ss_pred cceeEEEecCCcccceeeeeecccc----ccceeEEEeCCCCCeEEE-e-------cCCeEEEEEccCCCceeeeeecCC
Q 015290 193 NMATKIANVGNSVHARCQKVYPHAH----DFNINSISNNSDCETFVS-A-------DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 193 ~~~i~~~~~~~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~~l~~-~-------~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
+..|.-|+++. ...+.+.| ..| ...|..-..+++.++++. | -.|.+.+|..+ . ...+.
T Consensus 124 ~~aVyHW~~~~--~s~P~k~f-dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e-r-~~sQ~----- 193 (1630)
T 1xi4_A 124 DNAVYHWSMEG--ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-R-KVSQP----- 193 (1630)
T ss_pred CCeEEEeccCC--CCccHHHH-hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc-c-ccchh-----
Confidence 44577777754 22444433 333 355666777888888873 3 24778899887 2 22222
Q ss_pred CcCcCccCceEEEEEe--CCCCCEEEEEeC---CCeEEEEeCCCccccccccccccccccccCCccc-cc--ccccceee
Q 015290 261 SNMDDLTEVITSAEFH--PIYCNLLAYSSS---RGFVRLVDMRQSALCDHSARILRDAAESHGSKSF-FT--EIIASISD 332 (409)
Q Consensus 261 ~~~~~~~~~v~~~~~~--p~~~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~i~~ 332 (409)
+.||.+....+... +....+|+.+.. .+.++|-++....... ..+.. ..... |. .-..-..+
T Consensus 194 --iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~---~~f~k-----k~~~~~~~~~~~~Dfpv~ 263 (1630)
T 1xi4_A 194 --IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN---QPFPK-----KAVDVFFPPEAQNDFPVA 263 (1630)
T ss_pred --hhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC---CCCcc-----ccccccCCcccccCcceE
Confidence 57776655544443 222134444332 3689998885430000 11110 00000 00 01223446
Q ss_pred eEeccCCCEEEEeec-CeEEEEEccCCCcceEEEe
Q 015290 333 IKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFK 366 (409)
Q Consensus 333 ~~~s~~g~~l~sg~~-~~v~iwd~~~~~~~~~~~~ 366 (409)
+..|+.-..+..-+. |.|.+||+.+ +.++..-+
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t-~~~i~~~r 297 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNR 297 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEeccc-chhhhhcc
Confidence 777877667776666 9999999987 66554433
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.34 E-value=0.4 Score=43.36 Aligned_cols=118 Identities=11% Similarity=0.074 Sum_probs=61.4
Q ss_pred cceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcC-cCccCceEEEEEeCC---CCCEEEEEeC-----
Q 015290 219 FNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM-DDLTEVITSAEFHPI---YCNLLAYSSS----- 288 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~---~~~~l~s~s~----- 288 (409)
.....|+|.|+|+++++- ..+.|++++.. .+.......+..... .........|+|+|+ +..+.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~-~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPE-SGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECC-CCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 356799999999977777 44578888764 333322222221100 112456789999995 4144444332
Q ss_pred -------CCeEEEEeCCCcccc-ccccccccccccccCCcccccccccceeeeEeccCCCEEEEee
Q 015290 289 -------RGFVRLVDMRQSALC-DHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 346 (409)
Q Consensus 289 -------dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~ 346 (409)
...|.-|+...+... .....++.. .+. -.. .....++|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~---~p~----~~~--H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAG---LPS----SKD--HQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEE---ECC----CSS--CCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEc---CCC----CCC--CCCCeEeECCCCeEEEEEC
Confidence 234555554332100 000111211 000 011 2468899999998766643
No 317
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.15 E-value=0.93 Score=42.92 Aligned_cols=116 Identities=4% Similarity=-0.066 Sum_probs=67.7
Q ss_pred ceeEEEeCCCCCeEEEe-c--CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 015290 220 NINSISNNSDCETFVSA-D--DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 296 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~-~--d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd 296 (409)
....|+++|....|+.+ . .+.|...++. +.....+ .. .-.....+++++++.+++.+-...+.|..+|
T Consensus 124 ~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--G~~~~~l------~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d 194 (628)
T 4a0p_A 124 SPRALALDPAEGFMYWTEWGGKPKIDRAAMD--GSERTTL------VP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSN 194 (628)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEE------EC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcccEEEccCCCeEEEeCCCCCCEEEEEeCC--CCceEEE------EC-CCCCcceEEEccccCEEEEEECCCCEEEEEc
Confidence 45789999865555554 2 5677777776 3333332 11 2346789999998724444445678899999
Q ss_pred CCCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee-c-CeEEEEEccCCCcceEEE
Q 015290 297 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~-~-~~v~iwd~~~~~~~~~~~ 365 (409)
+..... +.+.. .......+++.. ..|...+ . +.|...|..+ ++....+
T Consensus 195 ~dG~~~-----~v~~~-------------~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~t-g~~~~~l 244 (628)
T 4a0p_A 195 MLGLNR-----EVIAD-------------DLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTS-GQNRTII 244 (628)
T ss_dssp TTSCSC-----EEEEE-------------CCSCEEEEEEET--TEEEEEETTTTEEEEEETTT-CCSCEEE
T ss_pred CCCCce-----EEeec-------------cCCCceEEEEEC--CEEEEecCCCCEEEEEECCC-CCceEEE
Confidence 876432 12211 012345677764 3444443 3 8888888654 4444444
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.10 E-value=0.2 Score=39.91 Aligned_cols=114 Identities=11% Similarity=-0.030 Sum_probs=62.1
Q ss_pred ceeEEEeCCCCCeEEEecCCeEEEEEccCCCceeeeeecCCCcC--cCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeC
Q 015290 220 NINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNM--DDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDM 297 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~ 297 (409)
.+..++|+|+|.+.++ .+|.+.-.+.. +.....-+.. ...+ .+-.. ..++.|.|+| .+.++ .||.|.-++.
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~-t~~~~~W~~s-~t~IG~~Gw~~-F~a~~fD~~G-~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPP-THDNDNWMGR-AKKIGNGGWNQ-FQFLFFDPNG-YLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCC-CSTTCCHHHH-CEEEECSCGGG-CSEEEECTTS-CEEEE--ETTEEEEESC
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCC-CCCccccccc-ccEeccccccc-ceEEEECCCC-CEEEe--CCCEEEEeCC
Confidence 5679999999986666 77765554443 2111000000 0000 01111 4789999999 66665 5698887775
Q ss_pred CCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEE
Q 015290 298 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLK 351 (409)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~ 351 (409)
.+.. . ..+-. . .. .+-..--..+..+.|.|+|.+-+.. ++.++
T Consensus 115 P~~~-~----~~Wl~-~-a~---~vg~~gw~~~~~lff~p~G~Lyav~-dg~ly 157 (236)
T 1tl2_A 115 PQSD-T----DNWIA-R-AT---EVGSGGWSGFKFLFFHPNGYLYAVH-GQQFY 157 (236)
T ss_dssp CCST-T----CCHHH-H-SE---EEECSSGGGEEEEEECTTSCEEEEE-TTEEE
T ss_pred CcCC-C----Cceec-c-cc---EeccCCCCceEEEEECCCceEEEEe-CCcEE
Confidence 4322 1 11111 0 00 0000001357899999999988888 77654
No 319
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.76 E-value=0.16 Score=40.47 Aligned_cols=63 Identities=8% Similarity=-0.049 Sum_probs=35.3
Q ss_pred cceeEEEeCCCCCeEEEecCCeEEEEEccCCCc-----eeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCe
Q 015290 219 FNINSISNNSDCETFVSADDLRINLWNLEISDQ-----CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGF 291 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~~d~~i~lwd~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~ 291 (409)
..+..|.+.|+|.+.+.. |+.++-+....... ....+ ....-...+.+.|.|++ .+.+.. ++.
T Consensus 135 ~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~------g~~g~~~yr~l~f~~~G-~l~~v~--~g~ 202 (236)
T 1tl2_A 135 SGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKI------GQGGWDTFKFLFFSSVG-TLFGVQ--GGK 202 (236)
T ss_dssp GGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEE------ESSSGGGEEEEEECTTS-CEEEEE--TTE
T ss_pred CceEEEEECCCceEEEEe-CCcEEecCCCCCCCccccccccee------ccCCcceEEEEEECCCC-cEEEEe--CCe
Confidence 456899999999888877 77754322221110 00110 11222344567799988 666554 663
No 320
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.65 E-value=0.86 Score=38.58 Aligned_cols=106 Identities=8% Similarity=-0.001 Sum_probs=55.2
Q ss_pred EeCCCCCeEEEec---CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeC-CCeEEEEeCCCc
Q 015290 225 SNNSDCETFVSAD---DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-RGFVRLVDMRQS 300 (409)
Q Consensus 225 ~~~~~~~~l~~~~---d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~-dg~i~iwd~~~~ 300 (409)
.|++++++|+-.. ++.-.||.+...+.....+ ..+.. ..++|++ +.|+-.+. ...|.+.++..+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~l-------t~~~~----~~~~~~g-~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKI-------KNHYL----FTCNTSD-RYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEE-------ESSCC----CCSEEET-TEEEEECTTTCCEEEEETTTT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEE-------eCCCc----eEeeEEC-CEEEEEeCCCceEEEEECCCC
Confidence 5667888877552 4444555544334333332 22211 3467778 66665554 567888887665
Q ss_pred cccccccccccccccccCCcccccccccceeeeEeccCCCEEEEee--c-CeEEEEEccCCCcceEEE
Q 015290 301 ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--Y-MNLKLWDIRMDSTPVATF 365 (409)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~--~-~~v~iwd~~~~~~~~~~~ 365 (409)
... .++.. ... ..++|++.+|+-.. + ..|..-++. +.....+
T Consensus 178 ~~~----~l~~~----------------~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ld--G~~~~~L 222 (302)
T 3s25_A 178 SEA----LFYDC----------------NCY-KPVVLDDTNVYYMDVNRDNAIVHVNIN--NPNPVVL 222 (302)
T ss_dssp EEE----EEECS----------------CEE-EEEEEETTEEEEEEGGGTTEEEEECSS--SCCCEEC
T ss_pred CEE----EEeCC----------------Ccc-ceeeecCCEEEEEEcCCCcEEEEEECC--CCCeEEE
Confidence 421 11211 111 23568888888654 2 345555554 4444443
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.08 E-value=1.9 Score=39.00 Aligned_cols=32 Identities=9% Similarity=0.197 Sum_probs=23.0
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEeccCC
Q 015290 33 DIVSAIEFDKTGDYLAVGDRGGRVILFETVGG 64 (409)
Q Consensus 33 ~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~ 64 (409)
...+.|+|.|+|+++++-...+.|.+++..++
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g 58 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESG 58 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCC
Confidence 45679999999997776544457888875544
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.36 E-value=2 Score=36.06 Aligned_cols=23 Identities=9% Similarity=-0.076 Sum_probs=16.2
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCcc
Q 015290 278 IYCNLLAYSSSR-----GFVRLVDMRQSA 301 (409)
Q Consensus 278 ~~~~~l~s~s~d-----g~i~iwd~~~~~ 301 (409)
++ ++++.|+.+ ..+.+||+.+.+
T Consensus 159 ~~-~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 159 SG-VIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp TT-EEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred CC-EEEEECCCCCCcccceEEEEeCCCCc
Confidence 55 777777754 458889987754
No 323
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.20 E-value=3.1 Score=37.61 Aligned_cols=60 Identities=12% Similarity=-0.009 Sum_probs=35.0
Q ss_pred cceeEEEeCCCCC-eEEEe-cCCeEEEEEccCCCceeeeeecCCCcCc----CccCceEEEEEeCC
Q 015290 219 FNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD----DLTEVITSAEFHPI 278 (409)
Q Consensus 219 ~~v~~l~~~~~~~-~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~p~ 278 (409)
.....|+|.|++. .|+++ ..|.|++++.........+.+++..... ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3457899999985 45555 8899999975411111111222211111 12456789999996
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.03 E-value=4.8 Score=33.75 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=15.9
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCcc
Q 015290 278 IYCNLLAYSSSR-----GFVRLVDMRQSA 301 (409)
Q Consensus 278 ~~~~~l~s~s~d-----g~i~iwd~~~~~ 301 (409)
++ ++++.|+.+ ..+.+||+.+.+
T Consensus 200 ~~-~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 200 KD-KIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp TT-EEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CC-EEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 45 777777653 358889988754
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.32 E-value=6.6 Score=33.86 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=26.0
Q ss_pred CCcEEEEEECCCCCEEEEEecCCeEEEEeccCCc
Q 015290 32 VDIVSAIEFDKTGDYLAVGDRGGRVILFETVGGK 65 (409)
Q Consensus 32 ~~~v~~v~~~~~~~~la~~~~dg~i~iw~~~~~~ 65 (409)
-..-+.|+|.|||+++++-...|.|++++..++.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 3567899999999977766558999998765443
No 326
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.82 E-value=0.84 Score=41.82 Aligned_cols=80 Identities=15% Similarity=0.070 Sum_probs=52.5
Q ss_pred cceeEEEeCCCCCeEEEe--cCCeEEEEEccCCCceee--eeecCC--CcCcCccCceEEEEEeCCCCCEEEEEeCCCeE
Q 015290 219 FNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFN--IVDMKP--SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFV 292 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~--~~~~~~--~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i 292 (409)
.....+.++|||++++.+ .+.++.++|++.-...+. .++.+. ..-..-.-.....+|+++| +...+.--|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceE
Confidence 345678899999999875 799999999983111000 000000 0001123456789999999 777777789999
Q ss_pred EEEeCCC
Q 015290 293 RLVDMRQ 299 (409)
Q Consensus 293 ~iwd~~~ 299 (409)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999865
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.46 E-value=7 Score=32.67 Aligned_cols=23 Identities=13% Similarity=-0.084 Sum_probs=15.3
Q ss_pred CCCCEEEEEeCC-------CeEEEEeCCCcc
Q 015290 278 IYCNLLAYSSSR-------GFVRLVDMRQSA 301 (409)
Q Consensus 278 ~~~~~l~s~s~d-------g~i~iwd~~~~~ 301 (409)
++ ++++.|+.+ ..+.+||+.+++
T Consensus 155 ~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 155 GG-LLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TT-EEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CC-EEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 45 677777642 358889987754
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.20 E-value=7.5 Score=32.64 Aligned_cols=64 Identities=11% Similarity=0.037 Sum_probs=33.9
Q ss_pred CCCeEEEe-cC-----CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC-----CeEEEEeC
Q 015290 229 DCETFVSA-DD-----LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-----GFVRLVDM 297 (409)
Q Consensus 229 ~~~~l~~~-~d-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-----g~i~iwd~ 297 (409)
+++.++.| .+ ..+.+||+. ...-...-. +.........+.+ ++ ++++.|+.+ ..+.+||+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~-----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPE-RNEWRMITA-----MNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETT-TTEEEECCC-----CSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEET
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCC-CCeEeeCCC-----CCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeC
Confidence 45555655 33 457888887 333222211 1111122222333 45 777887764 46889998
Q ss_pred CCcc
Q 015290 298 RQSA 301 (409)
Q Consensus 298 ~~~~ 301 (409)
.+.+
T Consensus 239 ~~~~ 242 (308)
T 1zgk_A 239 ETET 242 (308)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8754
No 329
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.12 E-value=7.7 Score=32.68 Aligned_cols=105 Identities=11% Similarity=0.059 Sum_probs=56.0
Q ss_pred EeCCCCCeEEEe--cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC--CeEEEEeCCCc
Q 015290 225 SNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR--GFVRLVDMRQS 300 (409)
Q Consensus 225 ~~~~~~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d--g~i~iwd~~~~ 300 (409)
+++++++.|+-. ....|..-++. .+. .+.+ +. +.. ...+.|++ .+|+-...+ ..|..-++...
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~-g~~-~~~l------~~---~~~-~~~~~P~g-~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTA-SQS-EALF------YD---CNC-YKPVVLDD-TNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETT-TTE-EEEE------EC---SCE-EEEEEEET-TEEEEEEGGGTTEEEEECSSSC
T ss_pred EeeEECCEEEEEeCCCceEEEEECC-CCC-EEEE------eC---CCc-cceeeecC-CEEEEEEcCCCcEEEEEECCCC
Confidence 456777777755 35677777766 333 2222 11 112 23456888 666655433 35555566554
Q ss_pred cccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeec---CeEEEEEccCCCcceEEEe
Q 015290 301 ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY---MNLKLWDIRMDSTPVATFK 366 (409)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~---~~v~iwd~~~~~~~~~~~~ 366 (409)
.. ..+.. ..+ ..|+|++++|.-+++ +.|..-++. |...+.+.
T Consensus 218 ~~-----~~Lt~---------------~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D--G~~r~~l~ 262 (302)
T 3s25_A 218 NP-----VVLTE---------------ANI--EHYNVYGSLIFYQRGGDNPALCVVKND--GTGFKELA 262 (302)
T ss_dssp CC-----EECSC---------------SCE--EEEEEETTEEEEEECSSSCEEEEEETT--SCCCEEEE
T ss_pred Ce-----EEEeC---------------CCc--ceEEECCCEEEEEECCCCcEEEEEECC--CCccEEee
Confidence 32 22222 122 347888988876533 556666654 55444443
No 330
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=89.54 E-value=8.3 Score=32.16 Aligned_cols=64 Identities=9% Similarity=0.069 Sum_probs=34.0
Q ss_pred CCCeEEEe-cC-----CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCC-----CeEEEEeC
Q 015290 229 DCETFVSA-DD-----LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-----GFVRLVDM 297 (409)
Q Consensus 229 ~~~~l~~~-~d-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~d-----g~i~iwd~ 297 (409)
+++.++.| .+ ..+..||+. ...-...-. +.........+.+ ++ ++++.|+.+ ..+.+||+
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~-----~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPH-TGHWTNVTP-----MATKRSGAGVALL--ND-HIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETT-TTEEEEECC-----CSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEET
T ss_pred CCEEEEECCCCCCcccceEEEEeCC-CCcEEeCCC-----CCcccccceEEEE--CC-EEEEEeCCCCCcccceEEEEeC
Confidence 45566665 33 457888887 333322211 1111111122222 45 777877764 46889998
Q ss_pred CCcc
Q 015290 298 RQSA 301 (409)
Q Consensus 298 ~~~~ 301 (409)
.+.+
T Consensus 230 ~~~~ 233 (301)
T 2vpj_A 230 RTDS 233 (301)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8754
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.54 E-value=8.4 Score=32.24 Aligned_cols=27 Identities=15% Similarity=0.286 Sum_probs=16.8
Q ss_pred CCCEEEEEeCC----CeEEEEEcCCceeeee
Q 015290 126 NGSMFILSTND----KTIKLWKVRDQKVKKI 152 (409)
Q Consensus 126 ~~~~l~s~~~d----~~i~iwd~~~~~~~~~ 152 (409)
++..++.|+.+ ..+.+||+.+++....
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC
Confidence 55566666644 4577777777665443
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.52 E-value=9.4 Score=32.80 Aligned_cols=21 Identities=5% Similarity=-0.148 Sum_probs=14.0
Q ss_pred CCCEEEEEecC-CeEEEEeccC
Q 015290 43 TGDYLAVGDRG-GRVILFETVG 63 (409)
Q Consensus 43 ~~~~la~~~~d-g~i~iw~~~~ 63 (409)
++++++.|+.+ ..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~ 40 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQA 40 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTS
T ss_pred CCEEEEEeCcCCCeEEEEcccc
Confidence 56777777643 4677788764
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.51 E-value=8.3 Score=32.17 Aligned_cols=23 Identities=22% Similarity=0.066 Sum_probs=16.5
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCcc
Q 015290 278 IYCNLLAYSSSR-----GFVRLVDMRQSA 301 (409)
Q Consensus 278 ~~~~~l~s~s~d-----g~i~iwd~~~~~ 301 (409)
++ ++++.|+.+ ..+.+||+.+++
T Consensus 204 ~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 204 NN-LLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TT-EEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CC-EEEEECCCCCCcccceEEEEeCCCCC
Confidence 45 778887764 368899988754
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.01 E-value=7.1 Score=33.52 Aligned_cols=26 Identities=8% Similarity=-0.009 Sum_probs=19.5
Q ss_pred CCeEEEe-cCCeEEEEEccCCCceeeee
Q 015290 230 CETFVSA-DDLRINLWNLEISDQCFNIV 256 (409)
Q Consensus 230 ~~~l~~~-~d~~i~lwd~~~~~~~~~~~ 256 (409)
+..+++| .++++...|++ +++.+..+
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~-tG~~~W~~ 137 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINML-NGEIISAF 137 (339)
T ss_dssp CEEEEECEEEEEEEEEETT-TCCEEEEE
T ss_pred CCEEEEEecCCEEEEEECC-CCcEEEEE
Confidence 4467777 88899888888 67776664
No 335
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.39 E-value=12 Score=31.38 Aligned_cols=23 Identities=9% Similarity=-0.164 Sum_probs=16.1
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCcc
Q 015290 278 IYCNLLAYSSSR-----GFVRLVDMRQSA 301 (409)
Q Consensus 278 ~~~~~l~s~s~d-----g~i~iwd~~~~~ 301 (409)
++ ++++.|+.+ ..+.+||+.+.+
T Consensus 168 ~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 168 NR-LLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp TT-EEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred CC-EEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 45 777777754 458889987754
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.08 E-value=25 Score=33.72 Aligned_cols=28 Identities=25% Similarity=0.590 Sum_probs=19.6
Q ss_pred CCCCEEEEEeCCC--eEEEEEcCCceeeee
Q 015290 125 PNGSMFILSTNDK--TIKLWKVRDQKVKKI 152 (409)
Q Consensus 125 ~~~~~l~s~~~d~--~i~iwd~~~~~~~~~ 152 (409)
.+++.++.|+.++ .+.+||+.++.....
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEEC
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEc
Confidence 4777778876554 688888887766543
No 337
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=85.90 E-value=16 Score=32.88 Aligned_cols=29 Identities=14% Similarity=0.059 Sum_probs=22.0
Q ss_pred ceEEEEEeCCCCC-EEEEEeCCCeEEEEeCC
Q 015290 269 VITSAEFHPIYCN-LLAYSSSRGFVRLVDMR 298 (409)
Q Consensus 269 ~v~~~~~~p~~~~-~l~s~s~dg~i~iwd~~ 298 (409)
..+.|+|.|+| . .|+.+...|.|++++..
T Consensus 15 ~P~~~a~~pdG-~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDG-SQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSS-SCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCC-CeEEEEEeCCceEEEEeCC
Confidence 45799999998 5 34445678999999754
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.21 E-value=8.8 Score=35.36 Aligned_cols=77 Identities=5% Similarity=0.009 Sum_probs=45.8
Q ss_pred ceEEEEEeCCCCCEEEE-EeCCCeEEEEeCCCccccc-----cccccccccccccCCcccccccccceeeeEeccCCCEE
Q 015290 269 VITSAEFHPIYCNLLAY-SSSRGFVRLVDMRQSALCD-----HSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 342 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s-~s~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 342 (409)
....+.++||| ++++. |-.+.++.++|++.-.... ........ +.+ -.-.....+|.++| ..
T Consensus 324 sPHGv~vsPDG-kyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~a--e~e--------~GlGPlHt~Fd~~G-~a 391 (638)
T 3sbq_A 324 NPHGCNTSSDG-KYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVG--EPE--------LGLGPLHTTFDGRG-NA 391 (638)
T ss_dssp SCCCEEECTTS-CEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEE--CCB--------CCSCEEEEEECSSS-EE
T ss_pred CCcceeeCCCC-CEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEe--ecc--------CCCcccEEEECCCC-ce
Confidence 34678899999 65555 4568899999987521100 00000000 000 01245678999999 44
Q ss_pred EEe-e-cCeEEEEEccC
Q 015290 343 LSR-D-YMNLKLWDIRM 357 (409)
Q Consensus 343 ~sg-~-~~~v~iwd~~~ 357 (409)
.+. - |.+|.-|++..
T Consensus 392 YTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEETTTTEEEEEEHHH
T ss_pred EeeeeecceEEEEeccH
Confidence 444 2 68999999974
No 339
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.11 E-value=16 Score=30.67 Aligned_cols=26 Identities=4% Similarity=0.230 Sum_probs=15.2
Q ss_pred CCCEEEEEeC-C-----CeEEEEEcCCceeee
Q 015290 126 NGSMFILSTN-D-----KTIKLWKVRDQKVKK 151 (409)
Q Consensus 126 ~~~~l~s~~~-d-----~~i~iwd~~~~~~~~ 151 (409)
+++.++.|+. + ..+.+||+.+.+...
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 179 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE 179 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEE
Confidence 4556666654 1 356777777665543
No 340
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.84 E-value=7.3 Score=37.08 Aligned_cols=83 Identities=13% Similarity=0.070 Sum_probs=48.7
Q ss_pred cceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeeccCCCcccccccccc--cccCceeccCCCCCceeeccccc
Q 015290 114 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLL--AEKNFMNEHNPPSFAHGYHLEWT 191 (409)
Q Consensus 114 ~~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 191 (409)
..|.++.+ +..++++-+.|+++|+|++.++++.........+....-...+ ..+..+.... .++..-...
T Consensus 222 ~~Is~~~~----~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~----~~lv~y~P~ 293 (729)
T 3f7f_A 222 SVISCKLF----HERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYN----NTLVTLLPL 293 (729)
T ss_dssp CEEEEEEE----TTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESS----SEEEEEETT
T ss_pred ceEEEecc----CCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhhee----eEEEEEecC
Confidence 35666665 3669999999999999999999988776653221100001111 3344444332 333322224
Q ss_pred ccceeEEEecCCc
Q 015290 192 ENMATKIANVGNS 204 (409)
Q Consensus 192 ~~~~i~~~~~~~~ 204 (409)
.+|..++|.+...
T Consensus 294 ~~G~Fk~~~l~~~ 306 (729)
T 3f7f_A 294 ENGLFQMGTLLVD 306 (729)
T ss_dssp TTCEEEEEEEEC-
T ss_pred CCCeEEEEEEEEc
Confidence 4678899988543
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.90 E-value=40 Score=32.25 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=37.8
Q ss_pred CCCeEEEe-cCC--eEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCC-CCCEEEEEeC--C-----CeEEEEeC
Q 015290 229 DCETFVSA-DDL--RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI-YCNLLAYSSS--R-----GFVRLVDM 297 (409)
Q Consensus 229 ~~~~l~~~-~d~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~s~s~--d-----g~i~iwd~ 297 (409)
+++.++.| .++ .+.+||.. ...- ..+... ..++.......++.+..+ + ++++.|+. + +.+.+||+
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~-t~~W-~~~~~~-g~~p~~r~~~~a~v~~~~~~-~iyv~GG~~~~~~~~~~~v~~yd~ 575 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVT-EEIF-KDVTPK-DEFFQNSLVSAGLEFDPVSK-QGIILGGGFMDQTTVSDKAIIFKY 575 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETT-TTEE-EECCCS-SGGGGSCCBSCEEEEETTTT-EEEEECCBCTTSSCBCCEEEEEEE
T ss_pred CCEEEEECCCCCCCCEEEEECC-CCce-EEccCC-CCCCCcccceeEEEEeCCCC-EEEEECCcCCCCCeeeCcEEEEEc
Confidence 67777776 433 68889987 3332 221110 001111222234555655 5 77888775 2 45888998
Q ss_pred CCcc
Q 015290 298 RQSA 301 (409)
Q Consensus 298 ~~~~ 301 (409)
.+..
T Consensus 576 ~~~~ 579 (695)
T 2zwa_A 576 DAEN 579 (695)
T ss_dssp CTTC
T ss_pred cCCc
Confidence 8765
No 342
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.69 E-value=38 Score=33.83 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=28.4
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccc
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSAL 302 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~ 302 (409)
.+.+++..++. .++++-+.|+++|+|++.+++.
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCe
Confidence 46777788877 8999999999999999999864
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.45 E-value=70 Score=32.00 Aligned_cols=39 Identities=21% Similarity=0.389 Sum_probs=31.9
Q ss_pred ceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecC
Q 015290 220 NINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMK 259 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~ 259 (409)
.+.+++..++..++++- .|+++++|++. +++++.+.++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~-t~~~v~t~dL~ 276 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLS-TNQCVETIELS 276 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETT-TTEEEEEEECC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECC-CCCeEeeeccc
Confidence 45677777788888887 99999999999 78888877664
No 344
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=75.44 E-value=41 Score=29.33 Aligned_cols=109 Identities=10% Similarity=0.069 Sum_probs=60.5
Q ss_pred eEEEEEccCCC--ceeeeeecCCCcCcCccCceEEEEEe---CC---CCCEE-EEEeCCCeEEEEeCCCccccccccccc
Q 015290 240 RINLWNLEISD--QCFNIVDMKPSNMDDLTEVITSAEFH---PI---YCNLL-AYSSSRGFVRLVDMRQSALCDHSARIL 310 (409)
Q Consensus 240 ~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~---p~---~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~ 310 (409)
.|.+||+. +. +.++.+.++..... ....+..+++. |. +..++ ++=+..+.|.++|+.+++.. +..
T Consensus 124 kLv~~DL~-t~~~~li~~y~~p~~~~~-~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw----Rv~ 197 (381)
T 3q6k_A 124 AIVAYDLK-QPNYPEVVRYYFPTRLVE-KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW----NVT 197 (381)
T ss_dssp EEEEEESS-STTCCEEEEEECCGGGCC-CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE----EEE
T ss_pred eEEEEECC-CCCceeEEEEECCHHhcc-cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE----EEc
Confidence 56677887 55 66777665543333 24678889888 22 11233 33335678999999987642 222
Q ss_pred cccccccCCcccc--ccc----ccceeeeEeccC----CCEEEEeecCeEEEEEc
Q 015290 311 RDAAESHGSKSFF--TEI----IASISDIKFAND----GQHLLSRDYMNLKLWDI 355 (409)
Q Consensus 311 ~~~~~~~~~~~~~--~~~----~~~i~~~~~s~~----g~~l~sg~~~~v~iwd~ 355 (409)
.. ...+.....+ .+. ...+..++++|+ +++|.-..-..-++|-+
T Consensus 198 ~~-~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V 251 (381)
T 3q6k_A 198 HP-TFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSV 251 (381)
T ss_dssp CG-GGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEE
T ss_pred cC-CCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEE
Confidence 11 2222211111 111 247889999998 77777654333344433
No 345
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=74.72 E-value=47 Score=29.71 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=48.1
Q ss_pred ccceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEe
Q 015290 218 DFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 296 (409)
Q Consensus 218 ~~~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd 296 (409)
.+...++..++.-..+..- .-|.|.+||++ ++.++..-++ ..+.|...+-+... .=++.....|.|.--.
T Consensus 258 ~DFPvamqvs~kygviyviTK~G~i~lyDle-Tgt~i~~nrI-------s~~~iF~t~~~~~~-~Gi~~Vnr~GqVl~v~ 328 (494)
T 1bpo_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLE-TGTCIYMNRI-------SGETIFVTAPHEAT-AGIIGVNRKGQVLSVC 328 (494)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETT-TCCEEEEEEC-------CSSCEEEEEEETTT-TEEEEEETTCEEEEEE
T ss_pred cCceeEEEecccCCEEEEEecCceEEEEecc-cceeeeeecc-------cCCceEEecccCCC-CcEEEEccCceEEEEE
Confidence 3445678888877777766 99999999999 7777655221 23344444444444 4455555777766666
Q ss_pred CCCcc
Q 015290 297 MRQSA 301 (409)
Q Consensus 297 ~~~~~ 301 (409)
+....
T Consensus 329 v~e~~ 333 (494)
T 1bpo_A 329 VEEEN 333 (494)
T ss_dssp ECTTT
T ss_pred Ecccc
Confidence 65543
No 346
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=74.49 E-value=43 Score=29.18 Aligned_cols=157 Identities=6% Similarity=0.074 Sum_probs=79.0
Q ss_pred cceeEEEeC---CC----CCeEEEe--cCCeEEEEEccCCCceeeeeecC--CC-----cCcCc----cCceEEEEEeCC
Q 015290 219 FNINSISNN---SD----CETFVSA--DDLRINLWNLEISDQCFNIVDMK--PS-----NMDDL----TEVITSAEFHPI 278 (409)
Q Consensus 219 ~~v~~l~~~---~~----~~~l~~~--~d~~i~lwd~~~~~~~~~~~~~~--~~-----~~~~~----~~~v~~~~~~p~ 278 (409)
..+..+++. |+ +.++..+ ....|.++|+. +++..++.+.. +. ...+. ...+..++++|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~-~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHK-KQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETT-TTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECC-CCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 456677776 32 3344444 57789999998 66655554211 10 00111 246888999997
Q ss_pred ----CCCEEEEEeCCCeEEEEeCCCcccccc----ccccccccccccCCcccccccccceeeeEec-cCCCEEEEeec-C
Q 015290 279 ----YCNLLAYSSSRGFVRLVDMRQSALCDH----SARILRDAAESHGSKSFFTEIIASISDIKFA-NDGQHLLSRDY-M 348 (409)
Q Consensus 279 ----~~~~l~s~s~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~sg~~-~ 348 (409)
+ +.|+.....+. ++|-+.+.-+... .++.+.. .+....-..+++. .+|.+.++--. +
T Consensus 231 ~~~~~-~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~-----------kg~~s~~~~~~~D~~~G~ly~~~~~~~ 297 (381)
T 3q6k_A 231 DSEGN-RPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGN-----------RGKYNDAIALAYDPKTKVIFFAEANTK 297 (381)
T ss_dssp CTTSC-CEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEE-----------CCTTCCEEEEEECTTTCEEEEEESSSS
T ss_pred cCCCC-eEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeee-----------cCCCCCcceEEEeCCCCeEEEEeccCC
Confidence 5 66666655442 4554443211100 0111111 0001223345675 56765555544 9
Q ss_pred eEEEEEccC-CC--cceEEEecccCcccccccccCCCCccceeeEEEcCCCCeEEEc
Q 015290 349 NLKLWDIRM-DS--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 402 (409)
Q Consensus 349 ~v~iwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s~ 402 (409)
.|..|+... .- .....+-..... .-+..+++.++|.+.+..
T Consensus 298 aI~~w~~~~~~~~~~n~~~l~~d~~l-------------~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 298 QVSCWNTQKMPLRMKNTDVVYTSSRF-------------VFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EEEEEETTSCSBCGGGEEEEEECTTC-------------CSEEEEEECTTSCEEEEE
T ss_pred eEEEEeCCCCccccCceEEEEECCCc-------------cccCeEEECCCCeEEEEE
Confidence 999999763 11 223333322221 112477887788655443
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=72.25 E-value=45 Score=28.39 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=15.0
Q ss_pred CCCEEEEEec-C---------CeEEEEeccCCc
Q 015290 43 TGDYLAVGDR-G---------GRVILFETVGGK 65 (409)
Q Consensus 43 ~~~~la~~~~-d---------g~i~iw~~~~~~ 65 (409)
++++++.|+. + ..+.+||..+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 5677777775 2 357777776653
No 348
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=71.98 E-value=47 Score=28.44 Aligned_cols=35 Identities=9% Similarity=0.248 Sum_probs=29.3
Q ss_pred ccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcc
Q 015290 266 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSA 301 (409)
Q Consensus 266 ~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 301 (409)
-.+...++..++.. ..++.-..-|.|++||+.++.
T Consensus 258 ~~DFPVamqvs~ky-gviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 258 QNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp TTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCC
T ss_pred cCCceEEEEecccC-CEEEEEeCCcEEEEEEcccCc
Confidence 34566788888877 788888999999999999975
No 349
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=70.09 E-value=47 Score=27.69 Aligned_cols=23 Identities=4% Similarity=-0.005 Sum_probs=15.9
Q ss_pred CCCCEEEEEeC-C-----CeEEEEeCCCcc
Q 015290 278 IYCNLLAYSSS-R-----GFVRLVDMRQSA 301 (409)
Q Consensus 278 ~~~~~l~s~s~-d-----g~i~iwd~~~~~ 301 (409)
++ ++++.|+. + ..+.+||..+.+
T Consensus 148 ~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 148 MD-LVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TT-EEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CC-EEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 45 67777775 2 468889988754
No 350
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=65.86 E-value=58 Score=27.16 Aligned_cols=24 Identities=4% Similarity=-0.038 Sum_probs=15.9
Q ss_pred CCCCCEEEEEeC------CCeEEEEeCCCcc
Q 015290 277 PIYCNLLAYSSS------RGFVRLVDMRQSA 301 (409)
Q Consensus 277 p~~~~~l~s~s~------dg~i~iwd~~~~~ 301 (409)
.++ ++++.|+. -..+.+||+.+.+
T Consensus 157 ~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 157 HNG-MIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp ETT-EEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred ECC-EEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 345 67777764 2358899988754
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=59.51 E-value=39 Score=31.31 Aligned_cols=60 Identities=15% Similarity=-0.000 Sum_probs=37.5
Q ss_pred cceeeeEeccCCCEEEEeec-------------CeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcC
Q 015290 328 ASISDIKFANDGQHLLSRDY-------------MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG 394 (409)
Q Consensus 328 ~~i~~~~~s~~g~~l~sg~~-------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 394 (409)
.....|.|+++|.+.++-+. +.|..++..+ ++....+.+.... .++.++|+|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-Gel~~fl~~P~~a--------------EpnGiafSP 540 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGC--------------EVTGISFSP 540 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTT-CCEEEEEECCTTC--------------EEEEEEECT
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCC-CeEEEEEeCCCCc--------------cccCCEECC
Confidence 35677999999987763211 2566666653 5544444332211 016999999
Q ss_pred CCCeEEEc
Q 015290 395 DGLHFATG 402 (409)
Q Consensus 395 dg~~l~s~ 402 (409)
|++.|..+
T Consensus 541 D~ktLfV~ 548 (592)
T 4a9v_A 541 DQKTLFVG 548 (592)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 99988764
No 352
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=55.47 E-value=1.1e+02 Score=32.24 Aligned_cols=122 Identities=10% Similarity=0.118 Sum_probs=74.7
Q ss_pred CCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCcccccccccccccccccc
Q 015290 238 DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESH 317 (409)
Q Consensus 238 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 317 (409)
..+|.|.|+.......+. .-..-+.-++|.. +.+|.-. ..++.|||+.+.+. ++.+..
T Consensus 47 ~~~vvIidl~~~~~~~rr-----------pi~AdsAIMnP~~-~iiALra-g~~lQiFnl~~k~k----lks~~~----- 104 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR-----------PISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSK----MKAHTM----- 104 (1630)
T ss_pred CceEEEEECCCCCCcccc-----------cccchhhccCCCc-ceEEEec-CCeEEEeehHHhhh----hccccc-----
Confidence 347888888833332211 1122356678887 7666554 78899999987542 233222
Q ss_pred CCcccccccccceeeeEeccCCCEEEEeecCeEEEEEccCCCcceEEEecccCcccccccccCCCCccceeeEEEcCCCC
Q 015290 318 GSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 397 (409)
Q Consensus 318 ~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 397 (409)
..+|.--.|-.+ +.|+-.++..|+-|++..+..|.+.+..|.... ...|.+-.-+++.+
T Consensus 105 ---------~e~VvfWkWis~-~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~-----------~~QIinY~~d~~~k 163 (1630)
T 1xi4_A 105 ---------TDDVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA-----------GCQIINYRTDAKQK 163 (1630)
T ss_pred ---------CCCceEEEecCC-CeeEEEcCCeEEEeccCCCCccHHHHhcchhcc-----------cCeeEEeeeCCCCC
Confidence 234554556543 466666778999999964356777776665542 12235778888888
Q ss_pred eEEEc
Q 015290 398 HFATG 402 (409)
Q Consensus 398 ~l~s~ 402 (409)
+++..
T Consensus 164 W~~l~ 168 (1630)
T 1xi4_A 164 WLLLT 168 (1630)
T ss_pred eEEEE
Confidence 87743
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=53.86 E-value=1.6e+02 Score=28.28 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=24.2
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEeCCCccc
Q 015290 269 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSAL 302 (409)
Q Consensus 269 ~v~~~~~~p~~~~~l~s~s~dg~i~iwd~~~~~~ 302 (409)
.|.++.+ +. .++++-+.|.++|+|++++++.
T Consensus 223 ~Is~~~~--~~-~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 223 VISCKLF--HE-RYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp EEEEEEE--TT-TEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEecc--CC-cEEEEEEcCCeEEEEEcCCCce
Confidence 3444444 34 7999999999999999999864
No 354
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=52.70 E-value=99 Score=25.66 Aligned_cols=23 Identities=9% Similarity=0.104 Sum_probs=15.1
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCcc
Q 015290 278 IYCNLLAYSSSR-----GFVRLVDMRQSA 301 (409)
Q Consensus 278 ~~~~~l~s~s~d-----g~i~iwd~~~~~ 301 (409)
++ ++++.|+.+ ..+.+||+.+.+
T Consensus 206 ~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 206 KG-KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TT-EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CC-EEEEEcCcCCCCccceEEEEECCCCe
Confidence 45 777777643 346788887754
No 355
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=51.50 E-value=1.7e+02 Score=28.07 Aligned_cols=114 Identities=12% Similarity=0.050 Sum_probs=62.3
Q ss_pred cceeEEEeCCCCCeEEE-ecCCeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEEEeCCCeEEEEeC
Q 015290 219 FNINSISNNSDCETFVS-ADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDM 297 (409)
Q Consensus 219 ~~v~~l~~~~~~~~l~~-~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~s~dg~i~iwd~ 297 (409)
..|.++...++|...+. +..+-+..+|.. .+... .+.. ..+. ....+.++....+| .+.+. +..| |..||.
T Consensus 472 ~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~-~~~~~-~~~~--~~~~-~~~~~~~i~~d~~g-~lWig-t~~G-l~~~~~ 543 (758)
T 3ott_A 472 MFINQIIPDNEGNVWVLLYNNKGIDKINPR-TREVT-KLFA--DELT-GEKSPNYLLCDEDG-LLWVG-FHGG-VMRINP 543 (758)
T ss_dssp SCEEEEEECTTSCEEEEETTCSSEEEEETT-TTEEE-EECT--TTSC-GGGCEEEEEECTTS-CEEEE-ETTE-EEEECC
T ss_pred ceeeeEEEcCCCCEEEEccCCCCcEEEeCC-CCceE-EecC--CCcC-CCcccceEEECCCC-CEEEE-ecCc-eEEEec
Confidence 35788888888886653 533457788886 44332 2211 0111 13467888888888 66554 4444 888887
Q ss_pred CCccccccccccccccccccCCcccccccccceeeeEeccCCCEEEEeecCeEEEEEccC
Q 015290 298 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRM 357 (409)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~sg~~~~v~iwd~~~ 357 (409)
.+++. ..+.. .. +. ...|.++... +|++.++. .+.|..+|..+
T Consensus 544 ~~~~~-----~~~~~-~g-------l~--~~~i~~i~~~-~g~lWi~t-~~Gl~~~~~~~ 586 (758)
T 3ott_A 544 KDESQ-----QSISF-GS-------FS--NNEILSMTCV-KNSIWVST-TNGLWIIDRKT 586 (758)
T ss_dssp --CCC-----CBCCC-CC------------CCEEEEEEE-TTEEEEEE-SSCEEEEETTT
T ss_pred CCCce-----EEecc-cC-------CC--ccceEEEEEC-CCCEEEEC-CCCeEEEcCCC
Confidence 66542 11111 00 00 2356777654 66555444 55577888764
No 356
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=45.89 E-value=1e+02 Score=26.36 Aligned_cols=28 Identities=4% Similarity=0.065 Sum_probs=20.5
Q ss_pred CCEEEEeec-CeEEEEEccCCCcceEEEec
Q 015290 339 GQHLLSRDY-MNLKLWDIRMDSTPVATFKI 367 (409)
Q Consensus 339 g~~l~sg~~-~~v~iwd~~~~~~~~~~~~~ 367 (409)
+..+++|+. +.+...|+.+ |+.+-.+..
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~t-G~~~W~~~~ 139 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLN-GEIISAFGP 139 (339)
T ss_dssp CEEEEECEEEEEEEEEETTT-CCEEEEEST
T ss_pred CCEEEEEecCCEEEEEECCC-CcEEEEEec
Confidence 446667764 9999999886 777777754
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=43.00 E-value=1.3e+02 Score=30.90 Aligned_cols=40 Identities=20% Similarity=0.378 Sum_probs=31.2
Q ss_pred ceeEEEeCCCCCeEEEe-cCCeEEEEEccCCCceeeeeecCC
Q 015290 220 NINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKP 260 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~ 260 (409)
.+.+++..++..++++- .|+++++|++. ++.++.+.++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~-t~~~v~t~DL~~ 279 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS-TNQCVETIELSQ 279 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT-TTEEEEEEECCC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC-CCCeEEeechhh
Confidence 34455566777888887 99999999999 788888877654
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=40.74 E-value=24 Score=36.11 Aligned_cols=39 Identities=10% Similarity=0.204 Sum_probs=30.9
Q ss_pred ceEEEEEEecCCCCEEEEEeCCCeEEEEEcCCceeeeeecc
Q 015290 115 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEM 155 (409)
Q Consensus 115 ~v~~l~~~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 155 (409)
.+.++.. .++..++++-+.|+++|+|++.++++.....+
T Consensus 239 ~~vs~~~--~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIF--LSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEE--ETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeec--cCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 4445555 47778999999999999999999988776554
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=36.37 E-value=1.4e+02 Score=27.95 Aligned_cols=57 Identities=11% Similarity=0.097 Sum_probs=34.0
Q ss_pred eeEEEeCCCCCeEEEec-C------------CeEEEEEccCCCceeeeeecCCCcCcCccCceEEEEEeCCCCCEEEE
Q 015290 221 INSISNNSDCETFVSAD-D------------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAY 285 (409)
Q Consensus 221 v~~l~~~~~~~~l~~~~-d------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s 285 (409)
.-.|+|+|.|.+++.-+ + ..+.+.+.. .++..+.+. ......++.++|+||+ +.|+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~-~g~~~rf~~------~P~gaE~TG~~fspDg-~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-TGEIRRFMV------GPIGCEVTGISFSPDQ-KTLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT-TCCEEEEEE------CCTTCEEEEEEECTTS-SEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCC-CCeEEEEEe------CCCCccCcCeeECCCC-CEEEE
Confidence 35689999998555432 1 123444444 455444431 1134678999999999 65544
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=36.34 E-value=1.3e+02 Score=28.00 Aligned_cols=20 Identities=20% Similarity=0.235 Sum_probs=16.4
Q ss_pred cccceeEEEeCCCCCeEEEe
Q 015290 217 HDFNINSISNNSDCETFVSA 236 (409)
Q Consensus 217 ~~~~v~~l~~~~~~~~l~~~ 236 (409)
....++.++|+||++.|+..
T Consensus 529 ~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 529 IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TTCEEEEEEECTTSSEEEEE
T ss_pred CCccCcCeeECCCCCEEEEE
Confidence 45688999999999888765
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=31.92 E-value=2.5e+02 Score=26.06 Aligned_cols=58 Identities=7% Similarity=0.066 Sum_probs=35.1
Q ss_pred ceeEEEeCCCCCeEEEe-c------------CCeEEEEEccCCCceeeeeecCCCcCcC-ccCceEEEEEeCCCCCEEEE
Q 015290 220 NINSISNNSDCETFVSA-D------------DLRINLWNLEISDQCFNIVDMKPSNMDD-LTEVITSAEFHPIYCNLLAY 285 (409)
Q Consensus 220 ~v~~l~~~~~~~~l~~~-~------------d~~i~lwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s 285 (409)
....|.|.++|.+.+.. . ...+..++.. .++....+ .. ....++.++|+||+ +.|+.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~-tGel~~fl-------~~P~~aEpnGiafSPD~-ktLfV 547 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-TGEIRRFM-------VGPIGCEVTGISFSPDQ-KTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT-TCCEEEEE-------ECCTTCEEEEEEECTTS-SEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC-CCeEEEEE-------eCCCCccccCCEECCCC-CEEEE
Confidence 45679999999877733 1 1144445544 34444432 21 23568999999999 65554
Q ss_pred E
Q 015290 286 S 286 (409)
Q Consensus 286 ~ 286 (409)
.
T Consensus 548 ~ 548 (592)
T 4a9v_A 548 G 548 (592)
T ss_dssp E
T ss_pred E
Confidence 4
No 362
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.70 E-value=3.5e+02 Score=23.19 Aligned_cols=74 Identities=9% Similarity=0.004 Sum_probs=36.0
Q ss_pred cceeEEEeCCC-CCeEEEe-cCCeEEEEEccCCCceeeeeecCCC--cCcC----ccCceEEEEEeCCCCCEEEEEeCCC
Q 015290 219 FNINSISNNSD-CETFVSA-DDLRINLWNLEISDQCFNIVDMKPS--NMDD----LTEVITSAEFHPIYCNLLAYSSSRG 290 (409)
Q Consensus 219 ~~v~~l~~~~~-~~~l~~~-~d~~i~lwd~~~~~~~~~~~~~~~~--~~~~----~~~~v~~~~~~p~~~~~l~s~s~dg 290 (409)
..+.+|.++|. ...+..+ .++.|... ...+.....+..... .+.. ....+.++.++|..+..|..+...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s--~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFES--TDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEE--SSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEE--CCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 35778888874 3445555 54444333 212333333211000 0000 0134889999997435666666554
Q ss_pred eEEEE
Q 015290 291 FVRLV 295 (409)
Q Consensus 291 ~i~iw 295 (409)
|...
T Consensus 255 -l~~s 258 (394)
T 3b7f_A 255 -IYRM 258 (394)
T ss_dssp -EEEE
T ss_pred -EEEe
Confidence 4433
Done!