Query 015291
Match_columns 409
No_of_seqs 243 out of 1843
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 10:01:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015291hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3doc_A Glyceraldehyde 3-phosph 100.0 6E-118 2E-122 886.9 29.9 321 85-409 1-321 (335)
2 4dib_A GAPDH, glyceraldehyde 3 100.0 2E-117 5E-122 885.5 28.9 319 86-409 4-322 (345)
3 3pym_A GAPDH 3, glyceraldehyde 100.0 1E-116 4E-121 876.6 30.8 316 87-409 2-319 (332)
4 3v1y_O PP38, glyceraldehyde-3- 100.0 4E-116 1E-120 874.2 30.1 318 86-409 3-323 (337)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 4E-116 1E-120 879.0 25.3 321 85-409 1-340 (359)
6 3h9e_O Glyceraldehyde-3-phosph 100.0 2E-114 6E-119 864.9 31.4 317 86-409 7-325 (346)
7 3lvf_P GAPDH 1, glyceraldehyde 100.0 1E-114 4E-119 863.6 27.2 316 84-409 2-323 (338)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 5E-115 2E-119 870.2 24.6 318 85-409 20-344 (356)
9 1obf_O Glyceraldehyde 3-phosph 100.0 2E-112 8E-117 849.1 30.0 318 87-409 2-321 (335)
10 2b4r_O Glyceraldehyde-3-phosph 100.0 4E-112 1E-116 849.2 27.9 318 86-409 11-332 (345)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 8E-112 3E-116 846.7 23.9 318 85-409 1-327 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 3E-105 1E-109 798.1 28.5 316 87-409 1-316 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 3E-104 1E-108 802.3 29.5 322 85-409 1-323 (380)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 1E-103 5E-108 787.7 29.7 320 86-409 1-321 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 9E-103 3E-107 782.9 30.9 322 85-409 1-323 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 1E-101 5E-106 772.7 29.0 318 87-409 2-319 (334)
17 1hdg_O Holo-D-glyceraldehyde-3 100.0 2E-100 9E-105 763.2 29.9 318 87-409 1-319 (332)
18 3cps_A Glyceraldehyde 3-phosph 100.0 2E-100 6E-105 769.8 27.5 321 84-409 15-339 (354)
19 1gad_O D-glyceraldehyde-3-phos 100.0 1.2E-99 4E-104 757.7 28.3 316 87-409 2-318 (330)
20 2x5j_O E4PDH, D-erythrose-4-ph 100.0 1.9E-99 7E-104 758.7 26.7 319 85-409 1-323 (339)
21 3e5r_O PP38, glyceraldehyde-3- 100.0 1.1E-98 4E-103 752.6 29.8 319 85-409 2-323 (337)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 3.1E-98 1E-102 748.6 27.7 318 85-409 2-321 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 7.7E-61 2.6E-65 480.1 14.3 242 85-356 1-253 (343)
24 2hjs_A USG-1 protein homolog; 100.0 6.8E-50 2.3E-54 399.9 22.8 291 85-409 5-323 (340)
25 2yv3_A Aspartate-semialdehyde 100.0 1.3E-49 4.6E-54 396.6 20.7 281 87-408 1-316 (331)
26 2r00_A Aspartate-semialdehyde 100.0 6.7E-49 2.3E-53 392.2 25.3 286 86-405 3-316 (336)
27 1cf2_P Protein (glyceraldehyde 100.0 2.7E-49 9.3E-54 395.2 8.0 272 87-404 2-284 (337)
28 1b7g_O Protein (glyceraldehyde 100.0 6.1E-47 2.1E-51 378.7 12.8 227 87-355 2-245 (340)
29 1t4b_A Aspartate-semialdehyde 100.0 1.3E-46 4.5E-51 380.0 10.5 239 87-354 2-299 (367)
30 2czc_A Glyceraldehyde-3-phosph 100.0 2.3E-45 7.8E-50 365.7 12.2 236 85-356 1-244 (334)
31 1xyg_A Putative N-acetyl-gamma 100.0 2.5E-42 8.4E-47 347.7 13.0 279 86-408 16-332 (359)
32 2ep5_A 350AA long hypothetical 100.0 4.1E-42 1.4E-46 344.6 13.7 242 86-355 4-270 (350)
33 1ys4_A Aspartate-semialdehyde 100.0 5.5E-41 1.9E-45 336.5 14.9 253 84-363 6-284 (354)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 2.9E-40 9.8E-45 330.9 14.3 232 86-356 4-264 (345)
35 3pwk_A Aspartate-semialdehyde 100.0 1.1E-38 3.9E-43 322.0 19.4 239 85-354 1-277 (366)
36 4dpk_A Malonyl-COA/succinyl-CO 100.0 1.9E-39 6.5E-44 326.9 12.1 242 86-356 7-275 (359)
37 4dpl_A Malonyl-COA/succinyl-CO 100.0 7E-39 2.4E-43 322.8 15.1 242 86-356 7-275 (359)
38 3tz6_A Aspartate-semialdehyde 100.0 6.5E-38 2.2E-42 314.2 19.8 235 87-353 2-279 (344)
39 3uw3_A Aspartate-semialdehyde 100.0 9.6E-39 3.3E-43 323.7 11.0 238 86-353 4-306 (377)
40 3pzr_A Aspartate-semialdehyde 100.0 1.5E-38 5.2E-43 321.5 11.0 237 87-353 1-298 (370)
41 3hsk_A Aspartate-semialdehyde 100.0 5.2E-36 1.8E-40 304.1 15.9 244 84-355 17-300 (381)
42 3dr3_A N-acetyl-gamma-glutamyl 100.0 1.3E-35 4.6E-40 296.6 12.5 277 87-404 5-311 (337)
43 2nqt_A N-acetyl-gamma-glutamyl 100.0 1.2E-33 4E-38 284.1 15.6 239 86-354 9-273 (352)
44 1vkn_A N-acetyl-gamma-glutamyl 99.9 2.7E-28 9.2E-33 245.0 8.6 228 86-354 13-272 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.6 2.3E-08 7.9E-13 98.5 4.7 222 86-339 4-280 (312)
46 1f06_A MESO-diaminopimelate D- 97.6 5.7E-05 2E-09 74.0 6.4 89 85-209 2-90 (320)
47 3bio_A Oxidoreductase, GFO/IDH 97.4 0.00013 4.5E-09 70.9 5.6 86 86-206 9-94 (304)
48 3ohs_X Trans-1,2-dihydrobenzen 97.4 0.00021 7.3E-09 69.5 6.8 98 85-209 1-98 (334)
49 3ezy_A Dehydrogenase; structur 97.3 0.0003 1E-08 68.7 6.8 96 85-209 1-96 (344)
50 4hkt_A Inositol 2-dehydrogenas 97.3 0.0003 1E-08 68.3 6.7 94 85-209 2-95 (331)
51 3i23_A Oxidoreductase, GFO/IDH 97.2 0.00051 1.8E-08 67.4 7.6 96 85-209 1-97 (349)
52 3mz0_A Inositol 2-dehydrogenas 97.2 0.00058 2E-08 66.8 7.4 98 85-209 1-98 (344)
53 2ejw_A HDH, homoserine dehydro 97.1 0.00084 2.9E-08 66.7 7.4 88 86-208 3-97 (332)
54 3euw_A MYO-inositol dehydrogen 97.1 0.0012 4.1E-08 64.4 8.1 94 86-209 4-97 (344)
55 4had_A Probable oxidoreductase 97.1 0.00085 2.9E-08 65.4 7.0 95 86-209 23-118 (350)
56 3f4l_A Putative oxidoreductase 97.1 0.00078 2.7E-08 65.9 6.8 95 85-209 1-97 (345)
57 3ing_A Homoserine dehydrogenas 97.0 0.0016 5.6E-08 64.4 8.5 36 86-121 4-43 (325)
58 4f3y_A DHPR, dihydrodipicolina 97.0 0.00068 2.3E-08 65.5 5.5 146 86-268 7-161 (272)
59 3ijp_A DHPR, dihydrodipicolina 97.0 0.00015 5.3E-09 70.8 0.8 96 86-206 21-117 (288)
60 3db2_A Putative NADPH-dependen 97.0 0.00047 1.6E-08 67.6 4.2 95 85-209 4-98 (354)
61 3qy9_A DHPR, dihydrodipicolina 96.9 0.00064 2.2E-08 64.7 4.8 33 86-121 3-35 (243)
62 3kux_A Putative oxidoreductase 96.9 0.0017 5.7E-08 63.8 8.0 92 86-209 7-99 (352)
63 3e18_A Oxidoreductase; dehydro 96.9 0.0012 4E-08 65.3 6.8 93 86-209 5-97 (359)
64 3ec7_A Putative dehydrogenase; 96.9 0.001 3.4E-08 65.7 6.2 99 84-209 21-119 (357)
65 3rc1_A Sugar 3-ketoreductase; 96.9 0.00087 3E-08 66.0 5.6 94 86-209 27-121 (350)
66 3gdo_A Uncharacterized oxidore 96.9 0.0023 8E-08 63.0 8.6 92 86-209 5-97 (358)
67 4gqa_A NAD binding oxidoreduct 96.9 0.00099 3.4E-08 66.7 5.8 97 86-209 26-128 (412)
68 1p9l_A Dihydrodipicolinate red 96.8 0.0015 5.1E-08 62.2 6.5 122 87-268 1-133 (245)
69 2ho3_A Oxidoreductase, GFO/IDH 96.8 0.0025 8.5E-08 61.6 8.0 94 86-209 1-94 (325)
70 4h3v_A Oxidoreductase domain p 96.8 0.00077 2.6E-08 65.8 4.4 97 86-209 6-107 (390)
71 3c1a_A Putative oxidoreductase 96.8 0.0013 4.5E-08 63.4 5.9 93 85-209 9-101 (315)
72 3evn_A Oxidoreductase, GFO/IDH 96.8 0.0014 4.7E-08 63.8 6.0 95 86-209 5-99 (329)
73 3fhl_A Putative oxidoreductase 96.8 0.0022 7.6E-08 63.2 7.6 92 86-209 5-97 (362)
74 3do5_A HOM, homoserine dehydro 96.8 0.00085 2.9E-08 66.4 4.5 36 86-121 2-43 (327)
75 3cea_A MYO-inositol 2-dehydrog 96.8 0.0029 9.8E-08 61.4 8.1 92 86-206 8-100 (346)
76 3mtj_A Homoserine dehydrogenas 96.8 0.0025 8.5E-08 65.7 8.0 94 86-209 10-111 (444)
77 3ic5_A Putative saccharopine d 96.8 0.0018 6.3E-08 52.0 5.7 98 85-208 4-101 (118)
78 3e9m_A Oxidoreductase, GFO/IDH 96.7 0.0016 5.5E-08 63.4 6.1 96 85-209 4-99 (330)
79 2dc1_A L-aspartate dehydrogena 96.7 0.0016 5.4E-08 60.5 5.8 136 87-269 1-136 (236)
80 3q2i_A Dehydrogenase; rossmann 96.7 0.0019 6.6E-08 63.3 6.5 95 86-209 13-107 (354)
81 3e82_A Putative oxidoreductase 96.7 0.0034 1.2E-07 62.1 8.0 92 86-209 7-99 (364)
82 3moi_A Probable dehydrogenase; 96.7 0.0013 4.3E-08 65.6 4.8 94 85-209 1-96 (387)
83 1ydw_A AX110P-like protein; st 96.6 0.0029 9.9E-08 62.2 7.1 98 86-209 6-103 (362)
84 4fb5_A Probable oxidoreductase 96.6 0.0029 9.9E-08 61.8 6.8 97 86-209 25-126 (393)
85 3c8m_A Homoserine dehydrogenas 96.6 0.00096 3.3E-08 65.9 3.3 36 86-121 6-46 (331)
86 3upl_A Oxidoreductase; rossman 96.5 0.0035 1.2E-07 64.7 6.9 106 86-201 23-133 (446)
87 2ixa_A Alpha-N-acetylgalactosa 96.5 0.0047 1.6E-07 62.8 7.8 100 85-207 19-121 (444)
88 1j5p_A Aspartate dehydrogenase 96.5 0.0019 6.4E-08 62.0 4.4 135 86-271 12-148 (253)
89 4ew6_A D-galactose-1-dehydroge 96.5 0.0027 9.1E-08 62.1 5.5 87 86-209 25-113 (330)
90 1tlt_A Putative oxidoreductase 96.4 0.004 1.4E-07 60.0 6.4 92 86-209 5-97 (319)
91 1zh8_A Oxidoreductase; TM0312, 96.4 0.0055 1.9E-07 59.9 7.1 96 86-209 18-114 (340)
92 3m2t_A Probable dehydrogenase; 96.4 0.0042 1.4E-07 61.3 6.2 95 86-209 5-100 (359)
93 3uuw_A Putative oxidoreductase 96.3 0.0033 1.1E-07 60.3 5.2 93 85-209 5-98 (308)
94 1h6d_A Precursor form of gluco 96.3 0.0093 3.2E-07 60.5 8.6 99 86-209 83-182 (433)
95 1xea_A Oxidoreductase, GFO/IDH 96.2 0.012 4.1E-07 56.8 8.2 94 85-209 1-95 (323)
96 1ebf_A Homoserine dehydrogenas 96.1 0.011 3.9E-07 59.0 7.8 36 86-121 4-40 (358)
97 1dih_A Dihydrodipicolinate red 96.1 0.0028 9.5E-08 61.0 3.2 99 86-209 5-104 (273)
98 1lc0_A Biliverdin reductase A; 95.9 0.012 4E-07 56.6 6.7 90 86-209 7-97 (294)
99 3ip3_A Oxidoreductase, putativ 95.7 0.0024 8.1E-08 62.3 1.1 96 85-209 1-99 (337)
100 2glx_A 1,5-anhydro-D-fructose 95.6 0.013 4.4E-07 56.5 5.8 91 87-207 1-92 (332)
101 1r0k_A 1-deoxy-D-xylulose 5-ph 95.6 0.012 4.1E-07 59.7 5.5 109 87-206 5-122 (388)
102 3o9z_A Lipopolysaccaride biosy 95.5 0.022 7.6E-07 55.2 7.0 94 86-209 3-104 (312)
103 2dt5_A AT-rich DNA-binding pro 95.5 0.018 6.2E-07 53.5 5.9 95 86-210 80-174 (211)
104 3u3x_A Oxidoreductase; structu 95.4 0.017 5.7E-07 57.1 5.8 94 86-209 26-120 (361)
105 3oa2_A WBPB; oxidoreductase, s 95.1 0.031 1.1E-06 54.3 6.7 94 86-209 3-105 (318)
106 2p2s_A Putative oxidoreductase 95.1 0.037 1.3E-06 53.6 7.0 93 86-209 4-98 (336)
107 2nvw_A Galactose/lactose metab 94.8 0.043 1.5E-06 56.6 6.9 99 86-209 39-146 (479)
108 3keo_A Redox-sensing transcrip 94.6 0.024 8.3E-07 52.9 4.1 99 86-210 84-182 (212)
109 3oqb_A Oxidoreductase; structu 94.6 0.026 8.8E-07 55.7 4.5 30 176-206 83-112 (383)
110 2vt3_A REX, redox-sensing tran 94.5 0.046 1.6E-06 50.9 5.9 95 86-210 85-179 (215)
111 3btv_A Galactose/lactose metab 94.5 0.021 7.1E-07 58.0 3.7 99 86-209 20-127 (438)
112 1y81_A Conserved hypothetical 94.4 0.12 4E-06 44.6 7.8 84 86-208 14-101 (138)
113 4gmf_A Yersiniabactin biosynth 94.4 0.11 3.8E-06 51.9 8.7 92 86-209 7-102 (372)
114 3ius_A Uncharacterized conserv 94.2 0.39 1.3E-05 44.3 11.6 33 85-120 4-36 (286)
115 3v5n_A Oxidoreductase; structu 94.1 0.06 2.1E-06 54.1 6.2 97 86-209 37-142 (417)
116 3dqp_A Oxidoreductase YLBE; al 94.1 0.088 3E-06 47.0 6.6 31 87-120 1-32 (219)
117 3a06_A 1-deoxy-D-xylulose 5-ph 93.8 0.17 5.9E-06 51.0 8.7 108 87-207 4-115 (376)
118 2duw_A Putative COA-binding pr 93.6 0.21 7.2E-06 43.1 7.9 86 86-208 13-102 (145)
119 3abi_A Putative uncharacterize 93.5 0.023 7.8E-07 56.1 1.8 92 86-208 16-107 (365)
120 3dty_A Oxidoreductase, GFO/IDH 93.5 0.057 2E-06 53.8 4.6 97 86-209 12-117 (398)
121 2d59_A Hypothetical protein PH 93.4 0.21 7.1E-06 43.1 7.5 82 87-207 23-108 (144)
122 1iuk_A Hypothetical protein TT 93.3 0.18 6.2E-06 43.4 6.9 86 87-209 14-103 (140)
123 3m2p_A UDP-N-acetylglucosamine 93.3 0.18 6.2E-06 47.4 7.6 33 85-120 1-34 (311)
124 3ff4_A Uncharacterized protein 93.2 0.21 7.3E-06 42.3 7.0 81 88-208 6-90 (122)
125 2bma_A Glutamate dehydrogenase 93.0 0.42 1.5E-05 49.5 10.2 102 87-206 253-365 (470)
126 2hmt_A YUAA protein; RCK, KTN, 92.8 0.21 7.2E-06 41.0 6.5 30 88-120 8-37 (144)
127 3fwz_A Inner membrane protein 92.8 0.12 4E-06 43.7 4.9 35 83-120 4-38 (140)
128 2nu8_A Succinyl-COA ligase [AD 92.6 0.16 5.3E-06 49.0 6.1 87 86-206 7-94 (288)
129 3ew7_A LMO0794 protein; Q8Y8U8 92.4 0.27 9.3E-06 43.3 6.9 31 87-120 1-32 (221)
130 3c1o_A Eugenol synthase; pheny 92.3 0.19 6.5E-06 47.4 6.2 32 86-120 4-36 (321)
131 1qyd_A Pinoresinol-lariciresin 92.3 0.19 6.4E-06 47.1 6.1 31 87-120 5-36 (313)
132 3e48_A Putative nucleoside-dip 92.1 0.1 3.5E-06 48.5 4.0 32 87-120 1-33 (289)
133 2r6j_A Eugenol synthase 1; phe 92.0 0.19 6.6E-06 47.4 5.8 33 85-120 10-43 (318)
134 3dhn_A NAD-dependent epimerase 91.7 0.18 6.2E-06 45.0 5.0 31 87-120 5-36 (227)
135 1hdo_A Biliverdin IX beta redu 91.7 0.19 6.6E-06 43.6 5.1 31 87-120 4-35 (206)
136 3i6i_A Putative leucoanthocyan 91.2 0.21 7.3E-06 47.9 5.3 101 86-208 10-119 (346)
137 3e8x_A Putative NAD-dependent 91.1 1.5 5.1E-05 39.3 10.6 32 86-120 21-53 (236)
138 1qyc_A Phenylcoumaran benzylic 90.2 0.32 1.1E-05 45.3 5.4 31 87-120 5-36 (308)
139 3r6d_A NAD-dependent epimerase 90.1 0.44 1.5E-05 42.5 6.0 31 87-120 5-38 (221)
140 3ego_A Probable 2-dehydropanto 90.0 0.89 3E-05 43.6 8.5 32 85-120 1-32 (307)
141 4ina_A Saccharopine dehydrogen 89.5 0.6 2E-05 46.8 7.0 156 87-263 2-167 (405)
142 2tmg_A Protein (glutamate dehy 89.4 0.66 2.3E-05 47.3 7.3 95 86-208 209-314 (415)
143 4g2n_A D-isomer specific 2-hyd 89.1 0.32 1.1E-05 48.3 4.7 31 87-120 174-204 (345)
144 1lss_A TRK system potassium up 89.1 0.46 1.6E-05 38.8 4.9 31 87-120 5-35 (140)
145 3pp8_A Glyoxylate/hydroxypyruv 89.0 0.31 1.1E-05 47.7 4.4 32 86-120 139-170 (315)
146 2pi1_A D-lactate dehydrogenase 89.0 0.33 1.1E-05 47.8 4.6 32 86-120 141-172 (334)
147 2gas_A Isoflavone reductase; N 88.9 0.39 1.3E-05 44.7 4.9 31 87-120 3-34 (307)
148 1vpd_A Tartronate semialdehyde 88.9 0.34 1.2E-05 45.5 4.5 32 85-119 4-35 (299)
149 3llv_A Exopolyphosphatase-rela 88.8 0.41 1.4E-05 39.8 4.4 31 87-120 7-37 (141)
150 4huj_A Uncharacterized protein 88.7 0.4 1.4E-05 43.6 4.6 33 86-121 23-55 (220)
151 3evt_A Phosphoglycerate dehydr 88.6 0.39 1.3E-05 47.2 4.8 32 86-120 137-168 (324)
152 1qp8_A Formate dehydrogenase; 88.6 0.37 1.3E-05 46.7 4.6 31 86-119 124-154 (303)
153 1oi7_A Succinyl-COA synthetase 88.5 0.46 1.6E-05 45.8 5.1 85 87-206 8-94 (288)
154 3kb6_A D-lactate dehydrogenase 88.4 0.39 1.3E-05 47.3 4.7 30 87-119 142-171 (334)
155 3qvo_A NMRA family protein; st 88.4 0.42 1.4E-05 43.3 4.6 34 85-120 22-56 (236)
156 3hg7_A D-isomer specific 2-hyd 88.4 0.39 1.3E-05 47.2 4.6 32 86-120 140-171 (324)
157 1xdw_A NAD+-dependent (R)-2-hy 88.3 0.39 1.3E-05 47.1 4.6 32 86-120 146-177 (331)
158 2yq5_A D-isomer specific 2-hyd 88.1 0.41 1.4E-05 47.4 4.7 32 86-120 148-179 (343)
159 1dxy_A D-2-hydroxyisocaproate 88.0 0.43 1.5E-05 46.9 4.7 32 86-120 145-176 (333)
160 3gg9_A D-3-phosphoglycerate de 88.0 0.42 1.4E-05 47.5 4.6 32 86-120 160-191 (352)
161 3gt0_A Pyrroline-5-carboxylate 88.0 0.41 1.4E-05 44.2 4.3 35 85-119 1-36 (247)
162 1bgv_A Glutamate dehydrogenase 87.9 0.9 3.1E-05 46.8 7.1 101 87-206 231-343 (449)
163 4egb_A DTDP-glucose 4,6-dehydr 87.9 0.76 2.6E-05 43.6 6.2 35 86-121 24-59 (346)
164 2g76_A 3-PGDH, D-3-phosphoglyc 87.8 0.45 1.5E-05 46.9 4.7 32 86-120 165-196 (335)
165 3jtm_A Formate dehydrogenase, 87.7 0.41 1.4E-05 47.6 4.3 32 86-120 164-195 (351)
166 1gtm_A Glutamate dehydrogenase 87.5 0.51 1.7E-05 48.1 5.0 32 87-121 213-245 (419)
167 1mx3_A CTBP1, C-terminal bindi 87.4 0.49 1.7E-05 46.9 4.7 32 86-120 168-199 (347)
168 4e5n_A Thermostable phosphite 87.4 0.38 1.3E-05 47.3 3.8 32 86-120 145-176 (330)
169 1gdh_A D-glycerate dehydrogena 87.3 0.5 1.7E-05 46.1 4.7 32 86-120 146-177 (320)
170 4hy3_A Phosphoglycerate oxidor 87.3 0.45 1.5E-05 47.6 4.3 32 86-120 176-207 (365)
171 4dgs_A Dehydrogenase; structur 87.2 0.5 1.7E-05 46.8 4.7 32 86-120 171-202 (340)
172 3gvx_A Glycerate dehydrogenase 87.2 0.41 1.4E-05 46.3 3.9 31 87-120 123-153 (290)
173 2cuk_A Glycerate dehydrogenase 87.2 0.52 1.8E-05 45.8 4.6 32 86-120 144-175 (311)
174 3aog_A Glutamate dehydrogenase 87.1 1.4 4.7E-05 45.3 8.0 95 86-208 235-339 (440)
175 2b69_A UDP-glucuronate decarbo 87.1 5.1 0.00018 37.8 11.6 32 86-120 27-59 (343)
176 1vm6_A DHPR, dihydrodipicolina 87.1 0.89 3E-05 42.8 6.0 161 86-328 12-175 (228)
177 3l4b_C TRKA K+ channel protien 87.0 0.44 1.5E-05 42.9 3.8 31 87-120 1-31 (218)
178 2ew2_A 2-dehydropantoate 2-red 87.0 0.56 1.9E-05 43.9 4.6 33 85-120 2-34 (316)
179 1id1_A Putative potassium chan 86.9 0.64 2.2E-05 39.4 4.6 31 87-120 4-34 (153)
180 1wwk_A Phosphoglycerate dehydr 86.7 0.57 1.9E-05 45.4 4.6 32 86-120 142-173 (307)
181 1j4a_A D-LDH, D-lactate dehydr 86.4 0.6 2.1E-05 45.8 4.7 32 86-120 146-177 (333)
182 2ekl_A D-3-phosphoglycerate de 86.3 0.62 2.1E-05 45.3 4.7 32 86-120 142-173 (313)
183 2o4c_A Erythronate-4-phosphate 86.2 0.6 2.1E-05 47.0 4.6 31 86-119 116-146 (380)
184 3oet_A Erythronate-4-phosphate 86.1 0.61 2.1E-05 47.0 4.6 30 87-119 120-149 (381)
185 3r3j_A Glutamate dehydrogenase 86.0 1.6 5.3E-05 45.1 7.7 102 87-206 240-352 (456)
186 2w2k_A D-mandelate dehydrogena 85.8 0.67 2.3E-05 45.7 4.7 31 87-120 164-195 (348)
187 3c24_A Putative oxidoreductase 85.8 0.7 2.4E-05 43.4 4.7 33 85-120 10-43 (286)
188 1sc6_A PGDH, D-3-phosphoglycer 85.7 0.66 2.2E-05 46.9 4.6 32 86-120 145-176 (404)
189 1ur5_A Malate dehydrogenase; o 85.7 0.37 1.3E-05 46.6 2.7 34 85-121 1-34 (309)
190 3ggo_A Prephenate dehydrogenas 85.4 0.73 2.5E-05 44.6 4.6 35 85-120 32-66 (314)
191 3ba1_A HPPR, hydroxyphenylpyru 85.3 0.65 2.2E-05 45.7 4.3 31 86-119 164-194 (333)
192 2vns_A Metalloreductase steap3 85.2 0.74 2.5E-05 41.7 4.4 32 86-120 28-59 (215)
193 2g1u_A Hypothetical protein TM 85.2 0.93 3.2E-05 38.5 4.7 31 87-120 20-50 (155)
194 2gcg_A Glyoxylate reductase/hy 85.1 0.66 2.2E-05 45.3 4.2 32 86-120 155-186 (330)
195 2dbq_A Glyoxylate reductase; D 85.1 0.76 2.6E-05 44.9 4.6 32 86-120 150-181 (334)
196 2nac_A NAD-dependent formate d 85.0 0.67 2.3E-05 46.8 4.3 31 87-120 192-222 (393)
197 2wm3_A NMRA-like family domain 84.7 0.73 2.5E-05 42.9 4.2 32 87-120 6-38 (299)
198 3g0o_A 3-hydroxyisobutyrate de 84.7 0.83 2.9E-05 43.4 4.6 33 85-120 6-38 (303)
199 4fcc_A Glutamate dehydrogenase 84.7 1.3 4.6E-05 45.5 6.4 101 87-206 236-347 (450)
200 2d0i_A Dehydrogenase; structur 84.6 0.73 2.5E-05 45.1 4.3 32 86-120 146-177 (333)
201 1yb4_A Tartronic semialdehyde 84.5 0.62 2.1E-05 43.6 3.6 31 86-119 3-33 (295)
202 3sc6_A DTDP-4-dehydrorhamnose 84.4 0.81 2.8E-05 42.1 4.3 34 84-120 3-37 (287)
203 2yv1_A Succinyl-COA ligase [AD 84.4 1.1 3.7E-05 43.3 5.3 86 86-206 13-100 (294)
204 3c85_A Putative glutathione-re 84.1 0.76 2.6E-05 40.0 3.8 32 86-120 39-71 (183)
205 4ezb_A Uncharacterized conserv 83.8 0.97 3.3E-05 43.6 4.7 35 84-120 22-56 (317)
206 2yv2_A Succinyl-COA synthetase 83.8 1.4 4.9E-05 42.5 5.9 86 86-206 13-101 (297)
207 2j6i_A Formate dehydrogenase; 83.5 0.8 2.7E-05 45.6 4.1 31 87-120 165-196 (364)
208 2ahr_A Putative pyrroline carb 83.4 0.94 3.2E-05 41.7 4.3 30 87-119 4-33 (259)
209 3d4o_A Dipicolinate synthase s 83.3 1.1 3.7E-05 42.7 4.8 31 87-120 156-186 (293)
210 3qha_A Putative oxidoreductase 83.3 0.78 2.7E-05 43.6 3.8 32 86-120 15-46 (296)
211 3k5p_A D-3-phosphoglycerate de 83.2 0.99 3.4E-05 46.0 4.7 30 87-119 157-186 (416)
212 3hwr_A 2-dehydropantoate 2-red 82.6 2.9 0.0001 40.1 7.6 30 86-118 19-48 (318)
213 3cky_A 2-hydroxymethyl glutara 82.5 1.1 3.8E-05 42.0 4.5 31 86-119 4-34 (301)
214 3two_A Mannitol dehydrogenase; 82.5 2.3 7.9E-05 41.0 6.8 81 88-201 179-259 (348)
215 2rir_A Dipicolinate synthase, 82.4 1.2 4.2E-05 42.4 4.8 31 87-120 158-188 (300)
216 1v9l_A Glutamate dehydrogenase 82.0 2.4 8.1E-05 43.3 6.9 32 87-121 211-242 (421)
217 3l9w_A Glutathione-regulated p 81.9 1 3.5E-05 45.5 4.2 36 87-127 5-40 (413)
218 1xgk_A Nitrogen metabolite rep 81.7 1.7 5.9E-05 42.2 5.6 32 86-120 5-37 (352)
219 2yfq_A Padgh, NAD-GDH, NAD-spe 81.6 2.5 8.4E-05 43.2 6.9 94 86-208 212-321 (421)
220 2f1k_A Prephenate dehydrogenas 81.2 1.4 4.9E-05 40.9 4.6 30 87-119 1-30 (279)
221 3pef_A 6-phosphogluconate dehy 81.0 1.4 4.9E-05 41.3 4.6 31 87-120 2-32 (287)
222 4dll_A 2-hydroxy-3-oxopropiona 81.0 1.3 4.6E-05 42.5 4.5 32 86-120 31-62 (320)
223 3dtt_A NADP oxidoreductase; st 81.0 1.5 5.2E-05 40.4 4.7 32 86-120 19-50 (245)
224 3h2s_A Putative NADH-flavin re 80.9 1.6 5.3E-05 38.5 4.6 31 87-120 1-32 (224)
225 4id9_A Short-chain dehydrogena 80.9 2.3 8E-05 40.2 6.1 32 86-120 19-51 (347)
226 3gg2_A Sugar dehydrogenase, UD 80.8 1.3 4.6E-05 45.1 4.6 33 85-120 1-33 (450)
227 3l6d_A Putative oxidoreductase 80.8 1.3 4.3E-05 42.4 4.2 32 86-120 9-40 (306)
228 1z82_A Glycerol-3-phosphate de 80.8 1.4 4.9E-05 42.3 4.6 36 82-120 10-45 (335)
229 2h78_A Hibadh, 3-hydroxyisobut 80.8 1.4 4.8E-05 41.6 4.5 31 87-120 4-34 (302)
230 2y1e_A 1-deoxy-D-xylulose 5-ph 80.5 2 6.7E-05 43.5 5.6 110 87-207 22-135 (398)
231 1q0q_A 1-deoxy-D-xylulose 5-ph 80.5 1.9 6.6E-05 43.7 5.5 112 84-207 8-131 (406)
232 2x0j_A Malate dehydrogenase; o 80.2 3.7 0.00013 39.7 7.4 22 87-108 1-22 (294)
233 3doj_A AT3G25530, dehydrogenas 80.2 1.5 5.2E-05 41.9 4.6 31 87-120 22-52 (310)
234 3k92_A NAD-GDH, NAD-specific g 79.9 2.5 8.5E-05 43.2 6.2 96 86-207 221-323 (424)
235 2g5c_A Prephenate dehydrogenas 79.8 1.7 5.8E-05 40.5 4.7 33 87-120 2-34 (281)
236 3b1f_A Putative prephenate deh 79.7 1.7 5.7E-05 40.7 4.6 33 86-119 6-38 (290)
237 1jay_A Coenzyme F420H2:NADP+ o 79.7 1.9 6.4E-05 38.2 4.7 31 87-120 1-32 (212)
238 4g65_A TRK system potassium up 79.6 1.4 4.9E-05 45.0 4.4 40 86-130 3-42 (461)
239 2raf_A Putative dinucleotide-b 79.4 1.9 6.3E-05 38.9 4.6 30 86-118 19-48 (209)
240 1bg6_A N-(1-D-carboxylethyl)-L 79.3 1.7 5.9E-05 41.6 4.6 32 86-120 4-35 (359)
241 3dfu_A Uncharacterized protein 79.2 0.76 2.6E-05 43.2 2.0 32 86-120 6-37 (232)
242 2zcu_A Uncharacterized oxidore 79.2 0.91 3.1E-05 41.6 2.5 32 88-120 1-33 (286)
243 3mw9_A GDH 1, glutamate dehydr 79.0 9 0.00031 39.9 10.1 32 87-121 245-276 (501)
244 1ygy_A PGDH, D-3-phosphoglycer 79.0 1.6 5.6E-05 45.4 4.7 32 86-120 142-173 (529)
245 2gf2_A Hibadh, 3-hydroxyisobut 78.8 1.6 5.3E-05 40.9 4.1 31 87-120 1-31 (296)
246 4b4o_A Epimerase family protei 78.8 1.9 6.4E-05 40.2 4.6 31 87-120 1-32 (298)
247 2cvz_A Dehydrogenase, 3-hydrox 78.6 1.6 5.3E-05 40.6 4.0 30 87-120 2-31 (289)
248 2bka_A CC3, TAT-interacting pr 78.4 3.6 0.00012 36.6 6.3 32 87-120 19-52 (242)
249 1i36_A Conserved hypothetical 78.3 1.8 6E-05 39.9 4.2 29 87-118 1-29 (264)
250 2uyy_A N-PAC protein; long-cha 78.1 1.9 6.6E-05 40.9 4.5 32 86-120 30-61 (316)
251 4e21_A 6-phosphogluconate dehy 77.9 1.9 6.6E-05 42.6 4.6 32 86-120 22-53 (358)
252 2qyt_A 2-dehydropantoate 2-red 77.9 1.5 5.2E-05 41.2 3.7 35 84-120 6-45 (317)
253 2axq_A Saccharopine dehydrogen 77.8 2.1 7.3E-05 43.9 5.1 90 87-201 24-113 (467)
254 2z2v_A Hypothetical protein PH 77.7 1.4 4.8E-05 43.6 3.6 91 86-207 16-106 (365)
255 3eag_A UDP-N-acetylmuramate:L- 77.6 9.1 0.00031 36.8 9.3 89 87-207 5-95 (326)
256 3aoe_E Glutamate dehydrogenase 77.4 2.3 7.9E-05 43.4 5.1 32 87-121 219-250 (419)
257 1evy_A Glycerol-3-phosphate de 77.1 1.8 6.3E-05 42.0 4.2 33 85-120 13-46 (366)
258 3d1l_A Putative NADP oxidoredu 77.1 1.8 6.1E-05 40.0 3.9 32 87-121 11-42 (266)
259 3i83_A 2-dehydropantoate 2-red 76.8 2.3 7.9E-05 40.7 4.7 33 85-120 1-33 (320)
260 3d64_A Adenosylhomocysteinase; 76.7 2.1 7.2E-05 44.5 4.7 31 87-120 278-308 (494)
261 2i76_A Hypothetical protein; N 76.5 0.77 2.6E-05 43.1 1.2 23 85-107 1-23 (276)
262 1yqd_A Sinapyl alcohol dehydro 76.4 2.5 8.7E-05 41.2 5.0 30 88-120 190-219 (366)
263 2pv7_A T-protein [includes: ch 76.1 2.2 7.5E-05 40.5 4.3 32 85-119 20-52 (298)
264 3nep_X Malate dehydrogenase; h 75.9 5.2 0.00018 38.9 7.0 23 87-109 1-23 (314)
265 1ks9_A KPA reductase;, 2-dehyd 75.8 2.6 8.9E-05 38.8 4.6 31 87-120 1-31 (291)
266 3pdu_A 3-hydroxyisobutyrate de 75.7 1.7 5.8E-05 40.8 3.4 31 87-120 2-32 (287)
267 3tri_A Pyrroline-5-carboxylate 75.5 2.3 7.9E-05 40.2 4.3 34 86-119 3-36 (280)
268 4gbj_A 6-phosphogluconate dehy 75.3 2.2 7.5E-05 40.9 4.1 34 84-120 3-36 (297)
269 2yjz_A Metalloreductase steap4 77.2 0.58 2E-05 42.4 0.0 32 85-119 18-49 (201)
270 3ktd_A Prephenate dehydrogenas 75.1 2.3 7.9E-05 41.9 4.3 31 87-120 9-39 (341)
271 3gpi_A NAD-dependent epimerase 75.0 2.5 8.6E-05 38.9 4.3 31 87-120 4-34 (286)
272 2iz1_A 6-phosphogluconate dehy 74.6 2.2 7.6E-05 43.6 4.2 32 86-120 5-36 (474)
273 1yqg_A Pyrroline-5-carboxylate 74.3 2.5 8.4E-05 38.8 4.0 31 87-119 1-31 (263)
274 1v8b_A Adenosylhomocysteinase; 74.2 2.2 7.4E-05 44.3 4.0 31 87-120 258-288 (479)
275 1t2d_A LDH-P, L-lactate dehydr 73.9 1.6 5.5E-05 42.5 2.8 32 87-121 5-36 (322)
276 3n58_A Adenosylhomocysteinase; 73.9 2.8 9.6E-05 43.3 4.7 30 87-119 248-277 (464)
277 3h9u_A Adenosylhomocysteinase; 73.9 2.8 9.6E-05 43.0 4.7 30 87-119 212-241 (436)
278 3hn2_A 2-dehydropantoate 2-red 73.8 2.5 8.6E-05 40.3 4.1 33 85-120 1-33 (312)
279 1ff9_A Saccharopine reductase; 73.6 4.8 0.00016 40.9 6.3 31 87-120 4-34 (450)
280 3qsg_A NAD-binding phosphogluc 73.5 2.4 8.3E-05 40.6 3.9 31 86-119 24-55 (312)
281 1np3_A Ketol-acid reductoisome 73.3 2.8 9.4E-05 40.8 4.3 31 87-120 17-47 (338)
282 3g17_A Similar to 2-dehydropan 73.1 1.8 6.3E-05 40.9 2.9 32 85-119 1-32 (294)
283 2ydy_A Methionine adenosyltran 73.0 3.3 0.00011 38.5 4.6 32 85-119 1-33 (315)
284 1e6u_A GDP-fucose synthetase; 73.0 3.8 0.00013 38.1 5.0 31 86-119 3-34 (321)
285 3vps_A TUNA, NAD-dependent epi 72.9 3.1 0.00011 38.4 4.4 33 85-120 6-39 (321)
286 2a35_A Hypothetical protein PA 72.5 2.7 9.3E-05 36.6 3.7 34 85-119 4-38 (215)
287 2gn4_A FLAA1 protein, UDP-GLCN 72.4 6 0.00021 38.0 6.5 32 87-120 22-55 (344)
288 3oj0_A Glutr, glutamyl-tRNA re 72.3 1.7 5.8E-05 36.4 2.2 31 86-119 21-51 (144)
289 4h7p_A Malate dehydrogenase; s 71.7 8.7 0.0003 37.9 7.5 23 86-108 24-47 (345)
290 3goh_A Alcohol dehydrogenase, 71.6 3.2 0.00011 39.3 4.2 30 87-119 144-173 (315)
291 2rcy_A Pyrroline carboxylate r 71.3 2.2 7.6E-05 39.0 3.0 23 86-108 4-26 (262)
292 4g65_A TRK system potassium up 71.3 2.1 7.1E-05 43.8 3.0 93 87-206 236-331 (461)
293 3dfz_A SIRC, precorrin-2 dehyd 70.9 9.8 0.00034 35.3 7.3 31 87-120 32-62 (223)
294 2zyd_A 6-phosphogluconate dehy 70.8 3.2 0.00011 42.6 4.3 32 86-120 15-46 (480)
295 2p4q_A 6-phosphogluconate dehy 70.8 3.2 0.00011 42.9 4.3 35 83-120 7-41 (497)
296 1c1d_A L-phenylalanine dehydro 70.1 4.1 0.00014 40.6 4.7 31 87-121 176-206 (355)
297 3c7a_A Octopine dehydrogenase; 69.4 3.8 0.00013 40.4 4.3 33 85-119 1-33 (404)
298 2izz_A Pyrroline-5-carboxylate 69.2 3.4 0.00012 39.6 3.9 35 86-120 22-57 (322)
299 4ej6_A Putative zinc-binding d 69.2 4.6 0.00016 39.4 4.9 29 88-119 185-214 (370)
300 3ldh_A Lactate dehydrogenase; 69.0 9.4 0.00032 37.5 7.0 23 87-109 22-44 (330)
301 1txg_A Glycerol-3-phosphate de 69.0 3.7 0.00013 38.8 4.0 31 87-120 1-31 (335)
302 3gvp_A Adenosylhomocysteinase 68.8 4.3 0.00015 41.6 4.7 30 87-119 221-250 (435)
303 1ek6_A UDP-galactose 4-epimera 68.6 4.4 0.00015 38.2 4.4 33 85-120 1-34 (348)
304 2x4g_A Nucleoside-diphosphate- 68.2 4.9 0.00017 37.6 4.7 31 87-120 14-45 (342)
305 2pgd_A 6-phosphogluconate dehy 68.1 3.9 0.00013 41.8 4.3 31 87-120 3-33 (482)
306 1uuf_A YAHK, zinc-type alcohol 68.1 4.2 0.00014 39.8 4.3 30 88-120 197-226 (369)
307 1pgj_A 6PGDH, 6-PGDH, 6-phosph 68.0 4 0.00014 41.8 4.3 31 87-120 2-32 (478)
308 2yy7_A L-threonine dehydrogena 67.5 3.3 0.00011 38.3 3.3 35 85-120 1-36 (312)
309 4gwg_A 6-phosphogluconate dehy 67.4 4.1 0.00014 42.1 4.3 32 86-120 4-35 (484)
310 3obb_A Probable 3-hydroxyisobu 66.5 5.3 0.00018 38.4 4.6 32 85-120 3-34 (300)
311 3slg_A PBGP3 protein; structur 66.3 4.6 0.00016 38.6 4.1 34 86-121 24-58 (372)
312 3st7_A Capsular polysaccharide 66.2 5.3 0.00018 38.3 4.6 44 87-132 1-45 (369)
313 1mv8_A GMD, GDP-mannose 6-dehy 66.1 5 0.00017 40.3 4.5 30 87-119 1-30 (436)
314 3ip1_A Alcohol dehydrogenase, 66.1 13 0.00045 36.5 7.5 29 88-119 216-245 (404)
315 4f6c_A AUSA reductase domain p 66.0 31 0.0011 33.7 10.2 32 87-121 70-102 (427)
316 3ruf_A WBGU; rossmann fold, UD 65.9 5.7 0.0002 37.5 4.7 32 86-120 25-57 (351)
317 3fpc_A NADP-dependent alcohol 65.9 21 0.00073 34.1 8.8 29 88-119 169-198 (352)
318 2o3j_A UDP-glucose 6-dehydroge 65.9 4.7 0.00016 41.3 4.3 34 85-119 8-41 (481)
319 3kkj_A Amine oxidase, flavin-c 65.6 5.9 0.0002 33.5 4.2 33 85-120 1-33 (336)
320 3ghy_A Ketopantoate reductase 65.5 5.3 0.00018 38.4 4.4 31 86-119 3-33 (335)
321 1f0y_A HCDH, L-3-hydroxyacyl-C 65.4 6.3 0.00022 37.2 4.9 31 87-120 16-46 (302)
322 2q3e_A UDP-glucose 6-dehydroge 65.3 4.3 0.00015 41.3 3.9 33 87-120 6-38 (467)
323 2dq4_A L-threonine 3-dehydroge 65.2 7.1 0.00024 37.4 5.3 29 88-119 167-196 (343)
324 1lld_A L-lactate dehydrogenase 65.1 6 0.00021 37.4 4.6 31 86-119 7-39 (319)
325 2aef_A Calcium-gated potassium 64.6 3.6 0.00012 37.2 2.8 30 86-119 9-38 (234)
326 1vl0_A DTDP-4-dehydrorhamnose 64.1 8 0.00027 35.4 5.2 32 86-120 12-44 (292)
327 4e12_A Diketoreductase; oxidor 64.0 6.6 0.00023 36.8 4.7 30 87-119 5-34 (283)
328 1piw_A Hypothetical zinc-type 63.6 5.2 0.00018 38.7 4.0 30 88-120 182-211 (360)
329 2cf5_A Atccad5, CAD, cinnamyl 63.4 3.8 0.00013 39.7 2.9 30 88-120 183-212 (357)
330 1xq6_A Unknown protein; struct 63.3 7.8 0.00027 34.2 4.8 34 86-120 4-38 (253)
331 2csu_A 457AA long hypothetical 62.9 19 0.00066 36.6 8.2 82 87-206 9-94 (457)
332 2fp4_A Succinyl-COA ligase [GD 62.7 8.3 0.00029 37.3 5.2 86 88-208 15-103 (305)
333 4dvj_A Putative zinc-dependent 62.6 4.2 0.00014 39.6 3.1 91 87-201 173-264 (363)
334 2d8a_A PH0655, probable L-thre 62.3 9.8 0.00034 36.5 5.6 29 88-119 170-199 (348)
335 2vhw_A Alanine dehydrogenase; 62.1 7.3 0.00025 38.5 4.8 32 86-120 168-199 (377)
336 3q2o_A Phosphoribosylaminoimid 62.1 8.2 0.00028 37.7 5.1 31 87-120 15-45 (389)
337 2d5c_A AROE, shikimate 5-dehyd 62.0 6.8 0.00023 36.3 4.3 30 88-120 118-147 (263)
338 3au8_A 1-deoxy-D-xylulose 5-ph 61.8 7.4 0.00025 40.2 4.7 45 87-131 78-125 (488)
339 3m6i_A L-arabinitol 4-dehydrog 61.6 8.2 0.00028 37.2 5.0 29 88-119 182-211 (363)
340 3ce6_A Adenosylhomocysteinase; 61.1 7.2 0.00025 40.5 4.7 30 87-119 275-304 (494)
341 1t2a_A GDP-mannose 4,6 dehydra 61.0 8 0.00027 37.0 4.7 33 85-120 23-56 (375)
342 1xa0_A Putative NADPH dependen 60.8 14 0.00047 35.0 6.3 30 88-120 152-182 (328)
343 1leh_A Leucine dehydrogenase; 60.7 7.9 0.00027 38.5 4.7 31 87-121 174-204 (364)
344 3ay3_A NAD-dependent epimerase 60.7 3.8 0.00013 37.3 2.2 33 85-120 1-34 (267)
345 3nkl_A UDP-D-quinovosamine 4-d 60.6 11 0.00037 31.0 4.9 33 87-121 5-37 (141)
346 3uog_A Alcohol dehydrogenase; 60.4 14 0.00047 35.7 6.4 30 88-120 192-221 (363)
347 2rh8_A Anthocyanidin reductase 59.9 8.4 0.00029 36.1 4.6 32 85-119 8-40 (338)
348 1n2s_A DTDP-4-, DTDP-glucose o 59.7 8.9 0.0003 35.1 4.6 30 87-120 1-31 (299)
349 3zwc_A Peroxisomal bifunctiona 59.7 17 0.00059 39.5 7.5 147 87-257 317-486 (742)
350 3ko8_A NAD-dependent epimerase 59.5 8.8 0.0003 35.4 4.6 31 87-120 1-32 (312)
351 1yj8_A Glycerol-3-phosphate de 59.2 5.3 0.00018 39.0 3.1 24 85-108 20-43 (375)
352 3uko_A Alcohol dehydrogenase c 58.6 12 0.0004 36.4 5.5 30 87-119 195-225 (378)
353 2c20_A UDP-glucose 4-epimerase 58.5 9.3 0.00032 35.6 4.6 31 87-120 2-33 (330)
354 1gpj_A Glutamyl-tRNA reductase 58.5 7.2 0.00025 38.8 4.0 31 87-120 168-199 (404)
355 3phh_A Shikimate dehydrogenase 58.2 67 0.0023 30.4 10.6 32 87-121 119-150 (269)
356 1n7h_A GDP-D-mannose-4,6-dehyd 57.7 9.8 0.00033 36.4 4.7 33 85-120 27-60 (381)
357 1rpn_A GDP-mannose 4,6-dehydra 57.7 10 0.00035 35.4 4.7 33 85-120 13-46 (335)
358 3jv7_A ADH-A; dehydrogenase, n 57.7 8.5 0.00029 36.8 4.3 31 88-120 174-204 (345)
359 1x13_A NAD(P) transhydrogenase 57.4 9.4 0.00032 38.2 4.7 32 86-120 172-203 (401)
360 4b8w_A GDP-L-fucose synthase; 57.4 7.6 0.00026 35.4 3.7 25 85-109 5-30 (319)
361 1orr_A CDP-tyvelose-2-epimeras 57.0 10 0.00035 35.4 4.6 31 87-120 2-33 (347)
362 2c5a_A GDP-mannose-3', 5'-epim 56.1 11 0.00036 36.4 4.7 32 86-120 29-61 (379)
363 1f8f_A Benzyl alcohol dehydrog 55.9 8.3 0.00028 37.3 3.9 29 88-119 193-222 (371)
364 3mwd_B ATP-citrate synthase; A 55.6 24 0.00083 34.7 7.2 95 87-208 11-113 (334)
365 3orq_A N5-carboxyaminoimidazol 55.4 14 0.00049 36.0 5.5 32 86-120 12-43 (377)
366 1rjw_A ADH-HT, alcohol dehydro 55.0 17 0.00057 34.7 5.9 31 87-120 166-196 (339)
367 2ph5_A Homospermidine synthase 54.9 7.3 0.00025 40.4 3.4 98 86-208 13-113 (480)
368 1l7d_A Nicotinamide nucleotide 54.9 11 0.00038 37.2 4.7 32 86-120 172-203 (384)
369 1e3j_A NADP(H)-dependent ketos 54.7 24 0.00084 33.7 7.0 29 88-119 171-199 (352)
370 4hv4_A UDP-N-acetylmuramate--L 54.7 33 0.0011 35.0 8.3 83 87-201 23-106 (494)
371 2y0c_A BCEC, UDP-glucose dehyd 54.5 11 0.00038 38.6 4.7 32 86-120 8-39 (478)
372 1dlj_A UDP-glucose dehydrogena 54.5 9.8 0.00034 37.8 4.2 30 87-120 1-30 (402)
373 2jhf_A Alcohol dehydrogenase E 54.5 22 0.00076 34.3 6.7 29 88-119 194-223 (374)
374 1pl8_A Human sorbitol dehydrog 54.4 13 0.00043 35.9 4.9 30 88-120 174-204 (356)
375 2hun_A 336AA long hypothetical 54.3 10 0.00035 35.3 4.2 33 87-120 4-37 (336)
376 2b5w_A Glucose dehydrogenase; 54.3 16 0.00053 35.2 5.5 31 87-120 174-207 (357)
377 3p2y_A Alanine dehydrogenase/p 54.1 9.3 0.00032 38.4 4.0 32 86-120 184-215 (381)
378 3pid_A UDP-glucose 6-dehydroge 54.0 11 0.00039 38.3 4.6 30 87-120 37-66 (432)
379 1y7t_A Malate dehydrogenase; N 53.9 11 0.00037 36.1 4.3 34 86-119 4-42 (327)
380 3qwb_A Probable quinone oxidor 53.9 13 0.00046 35.2 4.9 30 88-120 151-181 (334)
381 3k96_A Glycerol-3-phosphate de 53.9 11 0.00037 37.1 4.4 31 86-119 29-59 (356)
382 1x0v_A GPD-C, GPDH-C, glycerol 53.9 8.2 0.00028 36.9 3.4 23 86-108 8-30 (354)
383 2hk9_A Shikimate dehydrogenase 53.6 9.8 0.00033 35.6 3.9 31 87-120 130-160 (275)
384 1e3i_A Alcohol dehydrogenase, 53.6 18 0.00061 35.0 5.8 29 88-119 198-227 (376)
385 4aj2_A L-lactate dehydrogenase 53.5 23 0.00079 34.6 6.7 24 86-109 19-42 (331)
386 1pjq_A CYSG, siroheme synthase 53.4 27 0.00093 35.3 7.4 92 87-209 13-106 (457)
387 2bll_A Protein YFBG; decarboxy 53.3 13 0.00045 34.6 4.7 32 87-120 1-33 (345)
388 1p0f_A NADP-dependent alcohol 53.1 17 0.00057 35.2 5.5 29 88-119 194-223 (373)
389 2p5y_A UDP-glucose 4-epimerase 53.0 13 0.00045 34.3 4.6 31 87-120 1-32 (311)
390 3oh8_A Nucleoside-diphosphate 52.9 12 0.0004 38.2 4.6 31 87-120 148-179 (516)
391 2r85_A PURP protein PF1517; AT 52.8 12 0.0004 35.1 4.3 32 85-120 1-32 (334)
392 1sb8_A WBPP; epimerase, 4-epim 52.6 13 0.00046 35.0 4.7 31 87-120 28-59 (352)
393 2eez_A Alanine dehydrogenase; 52.5 13 0.00045 36.3 4.8 32 86-120 166-197 (369)
394 3s2e_A Zinc-containing alcohol 52.3 7.7 0.00026 37.0 3.0 30 88-120 169-198 (340)
395 1smk_A Malate dehydrogenase, g 52.3 11 0.00039 36.4 4.2 33 86-119 8-41 (326)
396 2q1w_A Putative nucleotide sug 52.0 14 0.00046 34.8 4.6 31 87-120 22-53 (333)
397 1zej_A HBD-9, 3-hydroxyacyl-CO 51.9 14 0.00047 35.6 4.6 75 86-189 12-86 (293)
398 2vn8_A Reticulon-4-interacting 51.7 14 0.00049 35.7 4.8 29 88-119 186-215 (375)
399 4gx0_A TRKA domain protein; me 51.3 12 0.00043 38.4 4.5 31 87-120 349-379 (565)
400 3d7l_A LIN1944 protein; APC893 51.1 14 0.00047 31.9 4.2 29 87-119 4-33 (202)
401 4dio_A NAD(P) transhydrogenase 50.9 14 0.00047 37.4 4.7 31 86-119 190-220 (405)
402 2fzw_A Alcohol dehydrogenase c 50.9 18 0.00063 34.8 5.4 29 88-119 193-222 (373)
403 3jyn_A Quinone oxidoreductase; 50.8 11 0.00038 35.7 3.8 30 88-120 143-173 (325)
404 1hyh_A L-hicdh, L-2-hydroxyiso 50.8 12 0.0004 35.6 4.0 32 87-119 2-33 (309)
405 1cdo_A Alcohol dehydrogenase; 50.7 19 0.00065 34.8 5.5 29 88-119 195-224 (374)
406 4a9w_A Monooxygenase; baeyer-v 50.4 52 0.0018 30.2 8.3 32 86-120 3-34 (357)
407 3enk_A UDP-glucose 4-epimerase 50.4 15 0.00052 34.3 4.6 32 86-120 5-37 (341)
408 3k6j_A Protein F01G10.3, confi 50.0 24 0.00083 36.2 6.4 31 87-120 55-85 (460)
409 2ewd_A Lactate dehydrogenase,; 49.9 13 0.00043 35.6 4.0 31 86-118 4-34 (317)
410 1vj0_A Alcohol dehydrogenase, 49.9 13 0.00043 36.3 4.1 31 88-120 198-228 (380)
411 2dpo_A L-gulonate 3-dehydrogen 49.9 15 0.0005 35.7 4.5 30 87-119 7-36 (319)
412 3nx4_A Putative oxidoreductase 49.7 18 0.00061 34.0 5.1 30 88-120 149-179 (324)
413 3lk7_A UDP-N-acetylmuramoylala 49.3 55 0.0019 32.7 8.9 88 87-207 10-101 (451)
414 1a5z_A L-lactate dehydrogenase 49.3 13 0.00043 35.8 3.9 30 87-119 1-32 (319)
415 1oc2_A DTDP-glucose 4,6-dehydr 49.3 12 0.00042 35.0 3.8 33 87-120 5-38 (348)
416 1udb_A Epimerase, UDP-galactos 49.0 16 0.00056 34.1 4.6 30 87-119 1-31 (338)
417 3krt_A Crotonyl COA reductase; 48.6 19 0.00065 36.0 5.3 30 88-120 231-261 (456)
418 1tt7_A YHFP; alcohol dehydroge 48.4 8.3 0.00028 36.5 2.5 30 88-120 153-183 (330)
419 3mog_A Probable 3-hydroxybutyr 47.6 14 0.0005 37.8 4.3 31 87-120 6-36 (483)
420 2cdc_A Glucose dehydrogenase g 47.4 14 0.00049 35.6 4.1 31 87-120 182-212 (366)
421 1i24_A Sulfolipid biosynthesis 47.0 18 0.0006 34.7 4.6 32 86-120 11-43 (404)
422 4hb9_A Similarities with proba 46.5 19 0.00063 34.2 4.6 30 87-119 2-31 (412)
423 1r6d_A TDP-glucose-4,6-dehydra 46.1 19 0.00066 33.5 4.6 33 87-120 1-38 (337)
424 1iow_A DD-ligase, DDLB, D-ALA\ 46.0 20 0.00067 33.0 4.6 33 85-120 1-42 (306)
425 2i99_A MU-crystallin homolog; 45.9 16 0.00053 35.0 4.0 22 87-108 136-157 (312)
426 4gx0_A TRKA domain protein; me 45.6 16 0.00056 37.5 4.3 35 83-120 124-158 (565)
427 3h5n_A MCCB protein; ubiquitin 45.5 12 0.00039 36.9 3.0 24 86-109 118-141 (353)
428 2pzm_A Putative nucleotide sug 45.4 18 0.0006 34.0 4.2 31 87-120 21-52 (330)
429 3fbg_A Putative arginate lyase 45.3 4.2 0.00014 39.1 -0.2 30 88-120 153-183 (346)
430 1y1p_A ARII, aldehyde reductas 45.1 20 0.00068 33.2 4.5 31 87-120 12-43 (342)
431 2pk3_A GDP-6-deoxy-D-LYXO-4-he 44.9 21 0.00071 33.0 4.6 31 87-120 13-44 (321)
432 1kew_A RMLB;, DTDP-D-glucose 4 44.8 16 0.00055 34.4 3.9 32 87-120 1-33 (361)
433 3gqv_A Enoyl reductase; medium 44.5 36 0.0012 32.9 6.5 30 87-119 166-196 (371)
434 2z1m_A GDP-D-mannose dehydrata 44.4 21 0.00073 33.0 4.6 31 87-120 4-35 (345)
435 1rkx_A CDP-glucose-4,6-dehydra 44.2 21 0.00072 33.6 4.6 31 87-120 10-41 (357)
436 1o9a_B FNBB, fibronectin bindi 43.9 3.6 0.00012 27.0 -0.6 21 387-407 13-33 (36)
437 2jl1_A Triphenylmethane reduct 43.8 12 0.00042 34.0 2.8 32 88-120 2-34 (287)
438 2cul_A Glucose-inhibited divis 43.7 86 0.0029 27.8 8.5 32 86-120 3-34 (232)
439 2eih_A Alcohol dehydrogenase; 43.7 35 0.0012 32.5 6.1 31 87-120 168-199 (343)
440 2v6b_A L-LDH, L-lactate dehydr 43.7 22 0.00075 33.9 4.6 29 87-118 1-31 (304)
441 4dup_A Quinone oxidoreductase; 43.6 21 0.00072 34.3 4.6 30 88-120 170-200 (353)
442 3tqh_A Quinone oxidoreductase; 43.5 30 0.001 32.6 5.5 29 88-119 155-184 (321)
443 3sxp_A ADP-L-glycero-D-mannohe 43.4 21 0.00073 33.8 4.5 32 86-120 10-44 (362)
444 3gvi_A Malate dehydrogenase; N 43.3 22 0.00076 34.6 4.6 30 86-118 7-37 (324)
445 3g79_A NDP-N-acetyl-D-galactos 43.1 21 0.0007 36.8 4.6 33 86-120 18-51 (478)
446 2hjr_A Malate dehydrogenase; m 42.8 23 0.00079 34.2 4.7 25 85-109 13-37 (328)
447 1gy8_A UDP-galactose 4-epimera 42.5 23 0.00079 33.8 4.6 31 87-120 3-35 (397)
448 1db3_A GDP-mannose 4,6-dehydra 42.5 23 0.00079 33.4 4.6 31 87-120 2-33 (372)
449 2ggs_A 273AA long hypothetical 41.8 20 0.00067 32.2 3.8 30 87-120 1-31 (273)
450 4a2c_A Galactitol-1-phosphate 41.8 48 0.0017 31.2 6.8 22 88-109 163-184 (346)
451 2q1s_A Putative nucleotide sug 41.6 24 0.00082 33.8 4.6 32 87-120 33-65 (377)
452 3k5i_A Phosphoribosyl-aminoimi 41.4 20 0.00069 35.3 4.1 31 86-119 24-54 (403)
453 3d0o_A L-LDH 1, L-lactate dehy 41.2 21 0.00072 34.3 4.1 23 86-108 6-28 (317)
454 1kjq_A GART 2, phosphoribosylg 41.1 28 0.00094 33.5 5.0 33 85-120 10-42 (391)
455 4a0s_A Octenoyl-COA reductase/ 40.9 29 0.00098 34.4 5.2 31 87-120 222-253 (447)
456 3ehe_A UDP-glucose 4-epimerase 40.8 20 0.00069 33.1 3.8 30 87-120 2-32 (313)
457 2dwc_A PH0318, 433AA long hypo 40.6 26 0.0009 34.4 4.8 33 85-120 18-50 (433)
458 3hhp_A Malate dehydrogenase; M 40.6 16 0.00055 35.4 3.1 22 87-108 1-23 (312)
459 1ldn_A L-lactate dehydrogenase 40.6 21 0.00071 34.3 3.9 32 86-118 6-37 (316)
460 3p7m_A Malate dehydrogenase; p 40.5 27 0.00093 33.8 4.8 31 86-118 5-35 (321)
461 1zcj_A Peroxisomal bifunctiona 40.4 25 0.00084 35.7 4.7 30 87-119 38-67 (463)
462 1lnq_A MTHK channels, potassiu 40.1 15 0.00053 34.9 2.9 29 87-119 116-144 (336)
463 3pqe_A L-LDH, L-lactate dehydr 40.0 21 0.00073 34.7 3.9 31 86-118 5-36 (326)
464 3ax6_A Phosphoribosylaminoimid 39.8 28 0.00097 33.5 4.8 31 87-120 2-32 (380)
465 1eq2_A ADP-L-glycero-D-mannohe 39.7 27 0.00092 31.9 4.4 32 88-121 1-33 (310)
466 1y6j_A L-lactate dehydrogenase 39.4 26 0.00088 33.7 4.4 23 86-108 7-29 (318)
467 1wly_A CAAR, 2-haloacrylate re 39.3 32 0.0011 32.5 5.0 30 88-120 148-178 (333)
468 2p4h_X Vestitone reductase; NA 38.8 30 0.001 31.8 4.6 29 88-119 3-32 (322)
469 2x6t_A ADP-L-glycero-D-manno-h 38.6 28 0.00097 32.8 4.5 33 87-121 47-80 (357)
470 2v6g_A Progesterone 5-beta-red 38.6 20 0.00068 33.7 3.4 34 87-120 2-38 (364)
471 4ffl_A PYLC; amino acid, biosy 38.5 31 0.0011 33.0 4.8 30 88-120 3-32 (363)
472 3iup_A Putative NADPH:quinone 38.3 31 0.0011 33.5 4.9 30 88-120 173-204 (379)
473 1pjc_A Protein (L-alanine dehy 38.0 31 0.001 33.6 4.8 31 87-120 168-198 (361)
474 3fr7_A Putative ketol-acid red 37.7 24 0.00082 36.9 4.1 22 87-108 55-76 (525)
475 2hrz_A AGR_C_4963P, nucleoside 37.7 33 0.0011 32.0 4.7 23 86-108 14-37 (342)
476 3tl2_A Malate dehydrogenase; c 37.5 32 0.0011 33.3 4.7 29 87-118 9-38 (315)
477 1pzg_A LDH, lactate dehydrogen 37.3 28 0.00096 33.6 4.3 24 86-109 9-32 (331)
478 1oju_A MDH, malate dehydrogena 36.9 26 0.00088 33.6 3.9 22 87-108 1-22 (294)
479 3ado_A Lambda-crystallin; L-gu 36.6 31 0.0011 33.6 4.5 30 88-121 8-37 (319)
480 1yvv_A Amine oxidase, flavin-c 36.2 30 0.001 31.9 4.2 33 85-120 1-33 (336)
481 2dkn_A 3-alpha-hydroxysteroid 36.2 36 0.0012 30.0 4.6 30 88-120 3-33 (255)
482 4a7p_A UDP-glucose dehydrogena 35.9 33 0.0011 34.8 4.7 32 86-120 8-39 (446)
483 2egg_A AROE, shikimate 5-dehyd 35.3 36 0.0012 32.3 4.7 31 87-120 142-173 (297)
484 1uay_A Type II 3-hydroxyacyl-C 35.3 30 0.001 30.4 3.9 30 87-119 3-33 (242)
485 3ihm_A Styrene monooxygenase A 35.3 30 0.001 34.1 4.2 38 80-120 16-53 (430)
486 3ond_A Adenosylhomocysteinase; 34.9 34 0.0012 35.5 4.7 31 87-121 266-296 (488)
487 2c29_D Dihydroflavonol 4-reduc 34.7 29 0.001 32.3 3.9 30 87-119 6-36 (337)
488 1qor_A Quinone oxidoreductase; 34.6 29 0.00098 32.7 3.8 30 88-120 143-173 (327)
489 1omo_A Alanine dehydrogenase; 34.5 32 0.0011 33.0 4.2 33 87-121 126-158 (322)
490 1mld_A Malate dehydrogenase; o 34.2 36 0.0012 32.6 4.5 23 87-109 1-24 (314)
491 1b8p_A Protein (malate dehydro 34.2 34 0.0012 32.9 4.3 23 86-108 5-28 (329)
492 3vtf_A UDP-glucose 6-dehydroge 34.1 37 0.0013 34.7 4.7 32 84-119 20-51 (444)
493 3fbs_A Oxidoreductase; structu 33.7 46 0.0016 29.8 5.0 33 85-120 1-33 (297)
494 1guz_A Malate dehydrogenase; o 33.7 43 0.0015 31.8 4.9 32 87-119 1-32 (310)
495 3pi7_A NADH oxidoreductase; gr 33.7 39 0.0013 32.2 4.6 30 88-120 167-197 (349)
496 4a27_A Synaptic vesicle membra 32.7 25 0.00087 33.6 3.2 31 88-120 145-176 (349)
497 3vku_A L-LDH, L-lactate dehydr 32.5 33 0.0011 33.4 3.9 22 87-108 10-31 (326)
498 4e4t_A Phosphoribosylaminoimid 32.5 40 0.0014 33.5 4.7 30 87-119 36-65 (419)
499 1ryi_A Glycine oxidase; flavop 32.5 47 0.0016 31.3 5.0 36 82-120 13-48 (382)
500 3hn7_A UDP-N-acetylmuramate-L- 31.2 1.7E+02 0.0059 29.8 9.3 88 87-207 20-109 (524)
No 1
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=5.8e-118 Score=886.88 Aligned_cols=321 Identities=53% Similarity=0.843 Sum_probs=312.3
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||||||||||+++|+++++..++++||||||+.++++++|||||||+||+|+++|+. ++++|.|||++|+|+++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEV-AGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEE-CSSEEESSSSEEEEECC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEE-ecCEEEECCEEEEEEee
Confidence 67899999999999999999998743469999999999999999999999999999999998 58899999999999999
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhh
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~ 244 (409)
++|+++||++.|+||||||||.|+++|+|+.|+++||||||||+|++| ++||||||||++.|++. ++|||||||||||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d-~~p~vV~gVN~~~~~~~-~~IISNasCTTn~ 157 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADG-ADLTVVYGVNNDKLTKD-HLVISNASCTTNC 157 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTT-CSEECCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEecccCHHHhCcc-CCeEecCchhhhh
Confidence 999999999999999999999999999999999999999999999986 57999999999999875 8999999999999
Q ss_pred hHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCc
Q 015291 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPT 324 (409)
Q Consensus 245 Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv 324 (409)
|+|++|+|||+|||++++|||||++|++|+++|++++||||+|++++||||++||++|+++||||+|+||++|+|+||||
T Consensus 158 Lap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 237 (335)
T 3doc_A 158 LAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPT 237 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESC
T ss_pred hHHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCccccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCC
Q 015291 325 PNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDN 404 (409)
Q Consensus 325 ~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDN 404 (409)
++||++||+++++|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++++|+++||||
T Consensus 238 ~~~s~~dlt~~lek~-~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDN 316 (335)
T 3doc_A 238 PNVSVVDLTFIAKRE-TTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDN 316 (335)
T ss_dssp SSCEEEEEEEEESSC-CCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECT
T ss_pred ccccceEEEEEECCC-CCHHHHHHHHHHhhcCCcCCeeEEEcCCeEeeeeCCCCCccccCchhhEEEcCCEEEEEEEEcC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 015291 405 EWGYR 409 (409)
Q Consensus 405 E~gys 409 (409)
|||||
T Consensus 317 E~gys 321 (335)
T 3doc_A 317 EWGFS 321 (335)
T ss_dssp THHHH
T ss_pred ccchH
Confidence 99996
No 2
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-117 Score=885.53 Aligned_cols=319 Identities=54% Similarity=0.885 Sum_probs=297.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||||||||||+++|+++++ ++++||||||+.++++++|||||||+||+|+++++. +++.|.|||++|+|++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~--~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKE--SAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEA-FEDHLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTC--SSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhC--CCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEeecC
Confidence 47999999999999999999987 469999999999999999999999999999999998 588999999999999999
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhhh
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~L 245 (409)
+|+++||++.|+||||||||.|+++|+|+.|+++||||||||+|+++ |+||||||||++.|++..++||||||||||||
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~L 159 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKN-EDVTIVVGVNEDQLDITKHTVISNASCTTNCL 159 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHcCcccCeEEECCchhhhhh
Confidence 99999999999999999999999999999999999999999999975 78999999999999863389999999999999
Q ss_pred HHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCcc
Q 015291 246 APFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTP 325 (409)
Q Consensus 246 apvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv~ 325 (409)
+|++|+|||+|||++++|||||+||++|+++|++++||||+|++++||||++||++|+++||||+|+|||+|+|+||||+
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 239 (345)
T 4dib_A 160 APVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTP 239 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECC-------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCS
T ss_pred HHHHHHHHHhcCeEEEEEEeeeeccCCceeccccccccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCCC
Q 015291 326 NVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE 405 (409)
Q Consensus 326 ~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDNE 405 (409)
+||++||+++++|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++|+||++|||||
T Consensus 240 ~~s~~dlt~~lek~-~t~eei~~~lk~As~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE 318 (345)
T 4dib_A 240 NVSLVDLVVDVKRD-VTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNE 318 (345)
T ss_dssp SEEEEEEEEEESSC-CCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEETT
T ss_pred ccEEEEEEEEECCC-CCHHHHHHHHHHhhcCcccceeeeEcCcEeeeecCCCCcchhhhhhccEEECCCEEEEEEEECCC
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 015291 406 WGYR 409 (409)
Q Consensus 406 ~gys 409 (409)
||||
T Consensus 319 ~Gys 322 (345)
T 4dib_A 319 WGYS 322 (345)
T ss_dssp HHHH
T ss_pred cchH
Confidence 9996
No 3
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=1.2e-116 Score=876.60 Aligned_cols=316 Identities=49% Similarity=0.785 Sum_probs=307.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~-~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
+||||||||||||+++|+++++ ++++||||||+ .++++++|||||||+||+|+++|+. ++++|.|||++|+|++++
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSR--PNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-DDKHIIVDGKKIATYQER 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHS--TTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCS
T ss_pred eEEEEECCCcHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEEeec
Confidence 7999999999999999999987 45999999998 7999999999999999999999998 588999999999999999
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhhh
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~L 245 (409)
+|+++||++.|+||||||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++. ++||||||||||||
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn~L 155 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS--TAPMFVMGVNEEKYTSD-LKIVSNASCTTNCL 155 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCC--CCCeEeeccchhhcCcc-ccEEecCcchhhhh
Confidence 9999999999999999999999999999999999999999999987 47999999999999875 89999999999999
Q ss_pred HHHHHHHHhhcCccEEEeeeeeccccccccccccc-hhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCc
Q 015291 246 APFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPT 324 (409)
Q Consensus 246 apvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv 324 (409)
+|++|+|||+|||++++|||||+||++|+++|+++ +||||+|++++||||++||++|+++||||+|+|||+|+|+||||
T Consensus 156 ap~lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 235 (332)
T 3pym_A 156 APLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPT 235 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCC
Confidence 99999999999999999999999999999999986 89999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCC
Q 015291 325 PNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDN 404 (409)
Q Consensus 325 ~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDN 404 (409)
++||++||+++++|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++++||++||||
T Consensus 236 ~~~s~~dlt~~lek~-~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDN 314 (332)
T 3pym_A 236 VDVSVVDLTVKLNKE-TTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDN 314 (332)
T ss_dssp SSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECT
T ss_pred CCcEeeEEEEEECCc-CCHHHHHHHHHHhccCccCceeEEEcCCeEeeccCCCCcceEEccccccccCCCEEEEEEEECC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 015291 405 EWGYR 409 (409)
Q Consensus 405 E~gys 409 (409)
|||||
T Consensus 315 E~gys 319 (332)
T 3pym_A 315 EYGYS 319 (332)
T ss_dssp THHHH
T ss_pred ccchH
Confidence 99996
No 4
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=4.1e-116 Score=874.20 Aligned_cols=318 Identities=48% Similarity=0.814 Sum_probs=308.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhhcccccccccCc-eEEEecCCeEEECCeEEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKA-DVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~-~~~~~~a~Ll~yDS~~G~f~~-~v~~~~~~~l~v~gk~I~v~~ 163 (409)
++||||||||||||+++|+++++ ++++||||||+ .++++++|||||||+||+|++ +|+.+++++|.|||++|+|++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~ 80 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEEC
T ss_pred ceEEEEECCChHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEE
Confidence 48999999999999999999986 46999999999 799999999999999999999 999853338999999999999
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchh
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn 243 (409)
+++|+++||++.|+||||||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++. ++||||||||||
T Consensus 81 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn 157 (337)
T 3v1y_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTTN 157 (337)
T ss_dssp CSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHH
T ss_pred ecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeECCCCCHHHcCCC-CcEEecCchhhh
Confidence 999999999999999999999999999999999999999999999987 58999999999999876 899999999999
Q ss_pred hhHHHHHHHHhhcCccEEEeeeeeccccccccccccc-hhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEec
Q 015291 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRV 322 (409)
Q Consensus 244 ~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRV 322 (409)
||+|++|+|||+|||++++|||||++|++|+++|+++ +||||+|++++||||++||++|+++||||+|+|||+|+|+||
T Consensus 158 ~Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRV 237 (337)
T 3v1y_O 158 CLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRV 237 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEEC
T ss_pred hHHHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEc
Confidence 9999999999999999999999999999999999987 899999999999999999999999999999999999999999
Q ss_pred CccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEe
Q 015291 323 PTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWY 402 (409)
Q Consensus 323 Pv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~Wy 402 (409)
||++||++||+++++|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++++||++||
T Consensus 238 Pv~~~s~~dlt~~lek~-~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WY 316 (337)
T 3v1y_O 238 PTVDVSVVDLTVRIEKA-ASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWY 316 (337)
T ss_dssp SCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTBTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEE
T ss_pred CCCCcEEEEEEEEECCC-CcHHHHHHHHHHhccCccCCeeEEEcCCEEeeccCCCCcceEEecccCeEECCCEEEEEEEE
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 015291 403 DNEWGYR 409 (409)
Q Consensus 403 DNE~gys 409 (409)
|||||||
T Consensus 317 DNE~gys 323 (337)
T 3v1y_O 317 DNEWGYS 323 (337)
T ss_dssp CTTHHHH
T ss_pred CCccchH
Confidence 9999996
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=4.3e-116 Score=878.98 Aligned_cols=321 Identities=45% Similarity=0.777 Sum_probs=308.3
Q ss_pred ceeeEEEEcCChhHHHHHHH----HHhCCCCCceEEEEeC-CCChhhhhhhhcccccccccCceEEEe-------cCCeE
Q 015291 85 AKLKVAINGFGRIGRNFLRC----WHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIV-------DNETI 152 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~----l~~~~~~~~~vVaInd-~~~~~~~a~Ll~yDS~~G~f~~~v~~~-------~~~~l 152 (409)
|++||||||||||||+++|+ ++++ ++++|||||| ..++++++|||||||+||+|+++|+.. ++++|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~--~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l 78 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLG--TEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTL 78 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBT--TTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcC--CCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEE
Confidence 67899999999999999999 4544 4699999999 589999999999999999999999972 47899
Q ss_pred EECCeEEEEEe-cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCC
Q 015291 153 SVDGKLIKVVS-NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEV 231 (409)
Q Consensus 153 ~v~gk~I~v~~-~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~ 231 (409)
.|||++|+|++ +++|+++||++.|+||||||||.|+++|+|+.|+++||||||||+|+++ |+||||||||++.|++..
T Consensus 79 ~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~ 157 (359)
T 3ids_C 79 VVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASG-GAKTLVMGVNHHEYNPSE 157 (359)
T ss_dssp EETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBS-SCEECCTTTTGGGCCTTT
T ss_pred EECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCC-CCCeEEeccCHHHcCCCC
Confidence 99999999998 8999999999999999999999999999999999999999999999975 789999999999998723
Q ss_pred CcEEecCCcchhhhHHHHHHH-HhhcCccEEEeeeeeccccccccccccc-hhhhhhhccccceecCCCchHHHHHHHcc
Q 015291 232 ANIVSNASCTTNCLAPFVKVM-DEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMP 309 (409)
Q Consensus 232 ~~IISnaSCTTn~Lapvlk~L-~~~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~r~~Raaa~NIIP~~tGaakav~kVlP 309 (409)
++||||||||||||+|++|+| ||+|||++++|||||+||++|+++|++| +||||+|++++||||++||++|+++||||
T Consensus 158 ~~IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlP 237 (359)
T 3ids_C 158 HHVVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIP 237 (359)
T ss_dssp CSEEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSG
T ss_pred CCEEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhch
Confidence 899999999999999999999 9999999999999999999999999998 79999999999999999999999999999
Q ss_pred ccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCce
Q 015291 310 QLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTM 389 (409)
Q Consensus 310 eL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~ 389 (409)
+|+|||+|+|+||||++||++||+++++|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|+
T Consensus 238 eL~gkltg~avRVPv~~vs~~dlt~~lek~-~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~ 316 (359)
T 3ids_C 238 STQGKLTGMSFRVPTPDVSVVDLTFTAARD-TSIQEIDAALKRASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATL 316 (359)
T ss_dssp GGTTSEEEEEEEESCSSCEEEEEEEECSSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEHHHHH
T ss_pred hhcCceEEEEEEcCCCCcEEEEEEEEECCC-CCHHHHHHHHHHhccCccCCceeEecCCEEeeecCCCCcceeEecccce
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred eeC----CCeEEEEEEeCCCCCCC
Q 015291 390 VMG----DDMVKVVAWYDNEWGYR 409 (409)
Q Consensus 390 ~~~----~~~vKl~~WyDNE~gys 409 (409)
+++ ++|+||++|||||||||
T Consensus 317 ~~~~~~~~~~vk~~~WYDNE~Gys 340 (359)
T 3ids_C 317 QNNLPKERRFFKIVSWYDNEWGYS 340 (359)
T ss_dssp HSSCTTCSSEEEEEEEECTTHHHH
T ss_pred eecccCCCCEEEEeEEECCCcchH
Confidence 998 89999999999999996
No 6
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=1.9e-114 Score=864.92 Aligned_cols=317 Identities=47% Similarity=0.786 Sum_probs=307.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~-~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||||||||||.++|++.++. ++||||||+ .++++++|||||||+||+|+++|+. +|++|.|||++|+|+++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~---veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e 82 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG---VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEF-RNGQLVVDNHEISVYQC 82 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEECC
T ss_pred eeEEEEECCChHHHHHHHHHHhCC---CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEE-cCCEEEECCEEEEEEec
Confidence 479999999999999999999873 999999997 7999999999999999999999998 58899999999999999
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhh
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~ 244 (409)
++|++|||+++|+||||||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++..++|||||||||||
T Consensus 83 ~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~--d~plvV~gVN~~~~~~~~~~IISNasCTTn~ 160 (346)
T 3h9e_O 83 KEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP--DAPMFVMGVNENDYNPGSMNIVSNASCTTNC 160 (346)
T ss_dssp SSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeeCcccCHHHcCcccCCEEECCcchhhh
Confidence 99999999999999999999999999999999999999999999987 5899999999999987238999999999999
Q ss_pred hHHHHHHHHhhcCccEEEeeeeeccccccccccccc-hhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecC
Q 015291 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVP 323 (409)
Q Consensus 245 Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVP 323 (409)
|+|++|+|||+|||++++|||||+||++|+++|+++ +||||+|++++||||++||++|+++||+|+|+||++|+|+|||
T Consensus 161 Lap~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVP 240 (346)
T 3h9e_O 161 LAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVP 240 (346)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEcc
Confidence 999999999999999999999999999999999986 7999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeC
Q 015291 324 TPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYD 403 (409)
Q Consensus 324 v~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyD 403 (409)
|++||++||+++++|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++++||++|||
T Consensus 241 v~~~s~~dlt~~lek~-~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYD 319 (346)
T 3h9e_O 241 TPDVSVVDLTCRLAQP-APYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYD 319 (346)
T ss_dssp CSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEEC
T ss_pred cccceeEEEEEEECCc-CCHHHHHHHHHHhccCccCCceeEEcCCeEeeccCCCCCceeEcccccEEecCCEEEEEEEEC
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 015291 404 NEWGYR 409 (409)
Q Consensus 404 NE~gys 409 (409)
||||||
T Consensus 320 NE~gys 325 (346)
T 3h9e_O 320 NEYGYS 325 (346)
T ss_dssp TTHHHH
T ss_pred CCcchH
Confidence 999996
No 7
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1.1e-114 Score=863.64 Aligned_cols=316 Identities=47% Similarity=0.729 Sum_probs=306.4
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 84 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
.|++||||||||||||+++|+++++ ++++||||||+.++++++|||||||+||+|+++|+. ++++|.|||++|+|++
T Consensus 2 ~m~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~ 78 (338)
T 3lvf_P 2 SMAVKVAINGFGRIGRLAFRRIQEV--EGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV-VDGGFRVNGKEVKSFS 78 (338)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CccEEEEEECCCcHHHHHHHHHHHC--CCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEE-cCCEEEECCEEEEEEE
Confidence 4789999999999999999999987 469999999999999999999999999999999998 5889999999999999
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchh
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn 243 (409)
+++|+++||++.|+||||||||.|+++|+|+.|+++||||||||+|+++ |+||||||||++.|++. ++||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~-~~IISNasCTTn 156 (338)
T 3lvf_P 79 EPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTN 156 (338)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCEECCTTTTGGGCCSC-CSEEECCCHHHH
T ss_pred ecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEeccCCHHHcCcc-CCeEecCchhhh
Confidence 9999999999999999999999999999999999999999999999975 78999999999999865 899999999999
Q ss_pred hhHHHHHHHHhhcCccEEEeeeeeccccccccccccch--hhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEe
Q 015291 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHR--DLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALR 321 (409)
Q Consensus 244 ~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~--d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avR 321 (409)
||+|++|+|||+|||++++|||||+||++|+++|++++ ||||+|++++||||++||++|+++||||+|+|||+|+|+|
T Consensus 157 ~Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avR 236 (338)
T 3lvf_P 157 SLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQR 236 (338)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEE
T ss_pred hhHHHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEE
Confidence 99999999999999999999999999999999999986 9999999999999999999999999999999999999999
Q ss_pred cCccceeEEEEEEEEcc-CCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeC---CCeEE
Q 015291 322 VPTPNVSVVDLVVNVEK-KGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMG---DDMVK 397 (409)
Q Consensus 322 VPv~~gs~vdltv~lek-~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~---~~~vK 397 (409)
|||++||++||+++++| + +++||||++|+++++|+ |+|+|+|+||+||+|++||||||+.+|++++ ++|+|
T Consensus 237 VPv~~~s~~dlt~~lek~~-~t~eei~~~lk~As~g~----l~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~vk 311 (338)
T 3lvf_P 237 VPVATGSLTELTVVLEKQD-VTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVK 311 (338)
T ss_dssp ESCSSCEEEEEEEEESSSS-CCHHHHHHHHHHTCCSS----EEEECSCCCGGGGTTCCCSEEEEGGGCEEEEETTEEEEE
T ss_pred cCCCceEEEEEEEEEccCC-CCHHHHHHHHHHhhcCC----cccccCCEEeEeeCCCCcceEEecccceEecCCCCCEEE
Confidence 99999999999999999 9 99999999999999987 9999999999999999999999999999998 89999
Q ss_pred EEEEeCCCCCCC
Q 015291 398 VVAWYDNEWGYR 409 (409)
Q Consensus 398 l~~WyDNE~gys 409 (409)
|++|||||||||
T Consensus 312 ~~~WYDNE~gys 323 (338)
T 3lvf_P 312 VAAWYDNEMSYT 323 (338)
T ss_dssp EEEEECTTHHHH
T ss_pred EEEEECCccchH
Confidence 999999999996
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=5.4e-115 Score=870.23 Aligned_cols=318 Identities=55% Similarity=0.900 Sum_probs=309.2
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||||||||||.++|+|++| +|+||||||+.++++++|||||||+||+|+++++. +|+.|.|||++|+|+++
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~---~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER---GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVES-RDGAIVVDGREIKIIAE 95 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEE-cCCEEEECCEEEEEEEc
Confidence 468999999999999999999998 38999999999999999999999999999999998 58899999999999999
Q ss_pred CCCCCCCccccCccEEEeCCCCCCC----hhhHHHHHH-cCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQ-AGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNAS 239 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s----~e~a~~hl~-aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaS 239 (409)
++|+++||++.|+||||||||.|++ +++|+.|++ +||||||||+|++| ++||||||||++.|++. ++||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d-~vp~vV~gVN~~~~~~~-~~IISNaS 173 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKD-EIKTIVLGVNDHDINSD-LKAVSNAS 173 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSS-CCEECCTTTSGGGCCTT-CCEEECCC
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCC-CCCEEeccCCHHHcCcC-ccEEECCc
Confidence 9999999999999999999999999 999999999 99999999999987 68999999999999876 79999999
Q ss_pred cchhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEE
Q 015291 240 CTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIA 319 (409)
Q Consensus 240 CTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~a 319 (409)
||||||+|++|+|||+|||++++|||||+||++|+++|++++||||+|++++||||++||++|+++||||+|+|||+|+|
T Consensus 174 CTTn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~a 253 (356)
T 3hja_A 174 CTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTS 253 (356)
T ss_dssp HHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEE
T ss_pred cchhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcccccccccccccEEEcCCCchHHHHHHhccccCCcEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccceeEEEEEEEE-ccCCCCHHHHHHHHHHcccCC-CCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEE
Q 015291 320 LRVPTPNVSVVDLVVNV-EKKGITAEDVNAAFRKAAEGP-LKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVK 397 (409)
Q Consensus 320 vRVPv~~gs~vdltv~l-ek~~vs~eeI~~al~~aa~~~-lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vK 397 (409)
+||||++||++||+++| +|+ +++|||+++|+++++|+ |||||+|+|+|+||+||+|++||||||+.+|++++++++|
T Consensus 254 vRVPv~~~s~~dlt~~l~ek~-~t~eeI~~~lk~Aa~g~~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk 332 (356)
T 3hja_A 254 MRVPVPTGSIVDLTVQLKKKD-VTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAK 332 (356)
T ss_dssp EEESCSSCEEEEEEEEESCTT-CCHHHHHHHHHHHHHSTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEECSTTEEE
T ss_pred EEcCCCccEeEEEEEEEccCC-CCHHHHHHHHHHHhcCchhccccceecCCeEeeeccCCCCceEEcCcCCEEEcCCEEE
Confidence 99999999999999999 999 99999999999999999 9999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCC
Q 015291 398 VVAWYDNEWGYR 409 (409)
Q Consensus 398 l~~WyDNE~gys 409 (409)
|++|||||||||
T Consensus 333 ~~~WYDNE~Gys 344 (356)
T 3hja_A 333 ILSWYDNEFGYS 344 (356)
T ss_dssp EEEEECTTHHHH
T ss_pred EEEEECCccchH
Confidence 999999999996
No 9
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=2.3e-112 Score=849.08 Aligned_cols=318 Identities=50% Similarity=0.829 Sum_probs=307.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC-CCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~-~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
+||||||||||||+++|+|+++. .++||||||||+.++++++|||+|||+||+|+++++.+ ++.|.++|++|+|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~-~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVN-GSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEE-TTEEEETTEEEEEECCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEe-CCEEEECCEEEEEEEcC
Confidence 79999999999999999999871 24699999999999999999999999999999999984 88999999999999999
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEecCCccccCcCCCcEEecCCcchhh
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNC 244 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP-~vV~gVN~~~~~~~~~~IISnaSCTTn~ 244 (409)
+|+++||++.|+||||||||.|+++++|+.|+++||||||||+|+++ |+| |||||||++.|++. ++|||||||||||
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~-dvp~~vV~gVN~~~~~~~-~~IISNasCTTn~ 158 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGA-DVDATVVYGVNHGTLKST-DTVISNASCTTNC 158 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCT-TSSEECCTTTSGGGCCTT-CCEEECCCHHHHH
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccC-CCCceEEccCCHHHhCcC-ccEEeCCcHHHHH
Confidence 99999999999999999999999999999999999999999999863 689 99999999999875 7899999999999
Q ss_pred hHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCc
Q 015291 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPT 324 (409)
Q Consensus 245 Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv 324 (409)
|+|++|+|||+|||++++|||||+|||+|+++|++|+||||+|++++||||++||++|+++||||+|+|||+|+|+||||
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv 238 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYHEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPT 238 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccccccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCC
Q 015291 325 PNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDN 404 (409)
Q Consensus 325 ~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDN 404 (409)
++||++||+++++|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++ +++|+|+++||||
T Consensus 239 ~~~s~~dl~v~lek~-~t~eei~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~-~~~~vk~~~WyDN 316 (335)
T 1obf_O 239 INVSIVDLSFVAKRN-TTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTVDASLTKV-SGRLVKVSSWYDN 316 (335)
T ss_dssp SSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEE-ETTEEEEEEEECT
T ss_pred cceEEEEEEEEECCC-CCHHHHHHHHHHhhhcccCCeecccCCceEeeeeCCCCccceeccccccc-cCCEEEEEEEeCC
Confidence 999999999999999 99999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CCCCC
Q 015291 405 EWGYR 409 (409)
Q Consensus 405 E~gys 409 (409)
|||||
T Consensus 317 E~gys 321 (335)
T 1obf_O 317 EWGFS 321 (335)
T ss_dssp THHHH
T ss_pred CcchH
Confidence 99996
No 10
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=4.3e-112 Score=849.23 Aligned_cols=318 Identities=47% Similarity=0.795 Sum_probs=308.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC-CCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd-~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||||||||||+++|++.++ ++||||+||| +.++++++|||+|||+||+|+++++.+ ++.|.++|++|.|+++
T Consensus 11 ~~kv~INGfGrIGr~v~ra~~~~--~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~-~~~l~v~Gk~i~v~~~ 87 (345)
T 2b4r_O 11 ATKLGINGFGRIGRLVFRAAFGR--KDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHA-DGFLLIGEKKVSVFAE 87 (345)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEE-TTEEEESSCEEEEECC
T ss_pred heEEEEeCCchHHHHHHHHHhhC--CCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEc-CCEEEECCEEEEEEEc
Confidence 78999999999999999999987 5699999999 689999999999999999999999984 8899999999999999
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhh
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~ 244 (409)
++|+++||++.|+||||||||.|+++++|+.|+++||||||||+|+++ |+||||||||++.|+.. ++|||||||||||
T Consensus 88 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~-dvplvV~gVN~~~~~~~-~~IISNasCTTn~ 165 (345)
T 2b4r_O 88 KDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD-DTPIYVMGINHHQYDTK-QLIVSNASCTTNC 165 (345)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred CCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHhCCC-CCEEECCchHHHH
Confidence 999999999999999999999999999999999999999999999974 68999999999999875 7899999999999
Q ss_pred hHHHHHHHHhhcCccEEEeeeeeccccccccccccc---hhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEe
Q 015291 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH---RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALR 321 (409)
Q Consensus 245 Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~---~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avR 321 (409)
|+|++|+|||+|||++++|||||+|||+|+++|+++ +||||+|++++||||++||++|+++||||+|+|||+|+|+|
T Consensus 166 Lap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avR 245 (345)
T 2b4r_O 166 LAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFR 245 (345)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEE
Confidence 999999999999999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred cCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEE
Q 015291 322 VPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAW 401 (409)
Q Consensus 322 VPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~W 401 (409)
|||++||++||+++|+|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++++||++|
T Consensus 246 VPv~~gs~~dltv~lek~-~t~eei~~~lk~a~~~~lkgil~y~~~~~VS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~W 324 (345)
T 2b4r_O 246 VPIGTVSVVDLVCRLQKP-AKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSW 324 (345)
T ss_dssp CSCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEEEEEEEEETTEEEEEEE
T ss_pred ecccceEEEEEEEEECCC-CCHHHHHHHHHHhhhcccCCcccccCCCceEEeeCCCCcccccccccCeEecCCEEEEEEE
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999998899999999
Q ss_pred eCCCCCCC
Q 015291 402 YDNEWGYR 409 (409)
Q Consensus 402 yDNE~gys 409 (409)
||||||||
T Consensus 325 yDNE~gys 332 (345)
T 2b4r_O 325 YDNEWGYS 332 (345)
T ss_dssp ECTTHHHH
T ss_pred eCCCcchH
Confidence 99999996
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=8.3e-112 Score=846.73 Aligned_cols=318 Identities=57% Similarity=0.927 Sum_probs=306.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||||||||||+++|+|+++ ++|+||||||+.++++++|||+|||+||+|+++++. +++.|.++|++|+++++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~--~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~-~~~~l~v~Gk~i~v~~~ 77 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGR--EEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEA-KDDSIVVDGKEIKVFAQ 77 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTC--TTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecCCChHHHhhhhhcccccccCCCcEEE-cCCEEEECCEEEEEEEc
Confidence 568999999999999999999987 569999999998999999999999999999999998 58899999999999999
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEecCCccccCcCCCcEEecCCcchh
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP-~vV~gVN~~~~~~~~~~IISnaSCTTn 243 (409)
++|++++|++.|+||||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++..++||||||||||
T Consensus 78 ~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~--dvp~~vV~gVN~~~~~~~~~~IISNasCTTn 155 (342)
T 2ep7_A 78 KDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK--NPDITVVLGVNEEKYNPKEHNIISNASCTTN 155 (342)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB--SCSEECCTTTSGGGCCTTTCCEEECCCHHHH
T ss_pred CChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC--CCCceEEcCcCHHHhcccCCeEEECCChHHH
Confidence 99999999999999999999999999999999999999999999987 589 999999999998733789999999999
Q ss_pred hhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecC
Q 015291 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVP 323 (409)
Q Consensus 244 ~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVP 323 (409)
||+|++|+|||+|||++++|||||+||++|+++|++|+||||+|++++||||++||++|+++||||+|+|||+|+|+|||
T Consensus 156 ~Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVP 235 (342)
T 2ep7_A 156 CLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPHKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVP 235 (342)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHHcCeeEEEEEEEeecccchhhhcCCcchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEEEEEcc-CCCCHHHHHHHHHHcccC-------CCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCe
Q 015291 324 TPNVSVVDLVVNVEK-KGITAEDVNAAFRKAAEG-------PLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDM 395 (409)
Q Consensus 324 v~~gs~vdltv~lek-~~vs~eeI~~al~~aa~~-------~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~ 395 (409)
|++||++||+++++| + +++|||+++|+++++| +|||||+|+|+|+||+||+|++||||||+.+|+++ +++
T Consensus 236 v~~~s~~dltv~lek~~-~t~eei~~~lk~a~~~~~~~~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~-~~~ 313 (342)
T 2ep7_A 236 VPDGSLIDLTVVVNKAP-SSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-DNL 313 (342)
T ss_dssp CSSCEEEEEEEEESSCC-SCHHHHHHHHHHHHHHHHTSCCGGGTTSEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTE
T ss_pred ccceEEEEEEEEEcCCC-CCHHHHHHHHHHHhcCCcccccccccccccccCCCeEeeeECCCCccceecccccccc-CCE
Confidence 999999999999999 9 9999999999999999 99999999999999999999999999999999999 789
Q ss_pred EEEEEEeCCCCCCC
Q 015291 396 VKVVAWYDNEWGYR 409 (409)
Q Consensus 396 vKl~~WyDNE~gys 409 (409)
+|+++|||||||||
T Consensus 314 vk~~~wyDNE~gys 327 (342)
T 2ep7_A 314 VHIAAWYDNEWGYS 327 (342)
T ss_dssp EEEEEEECTTHHHH
T ss_pred EEEEEEECCCccch
Confidence 99999999999996
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=3.2e-105 Score=798.05 Aligned_cols=316 Identities=55% Similarity=0.883 Sum_probs=305.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~~ 166 (409)
+||||||||||||.++|+|+++ +|+||+|||+.++++++|||+|||+||+|.++++. .++.|.++|+.|.++++++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~---~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR---GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAY-DDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEE-cCCEEEECCEEEEEEecCC
Confidence 5899999999999999999987 39999999999999999999999999999999997 5788999999999998889
Q ss_pred CCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhhhH
Q 015291 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (409)
Q Consensus 167 p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~La 246 (409)
|++++|++.++|+||||||.|.+++++++|+++||||||||+|+++ ++|++|||||++.|++..++||||||||||||+
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d-~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~la 155 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKG-EDITIVMGVNHEAYDPSRHHIISNASCTTNSLA 155 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCCEEECCCHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcC-CCCEEeeccCHHHhCcCCCCEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999874 589999999999998622689999999999999
Q ss_pred HHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCccc
Q 015291 247 PFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTPN 326 (409)
Q Consensus 247 pvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv~~ 326 (409)
|++||||++|||++++|||||++||+|+++|++|+||||+|++++||||++||++|+++||||+|+|||+++|+||||++
T Consensus 156 p~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~ 235 (331)
T 2g82_O 156 PVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTAT 235 (331)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHHhcCccEEEEEEEeecccccchhccccccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCCCC
Q 015291 327 VSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEW 406 (409)
Q Consensus 327 gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDNE~ 406 (409)
||++||+++++++ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|+++ ++++|+++||||||
T Consensus 236 gs~~dl~v~l~k~-~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~-~~~~k~~~wydne~ 313 (331)
T 2g82_O 236 GSISDITALLKRE-VTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL-GNMVKVFAWYDNEW 313 (331)
T ss_dssp CEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTH
T ss_pred EEEEEEEEEECCC-CCHHHHHHHHHHhhcCccCCccCCCCCCeeeeeeCCCCccceecchhcccc-CCEEEEEEEECCCc
Confidence 9999999999999 999999999999999999999999999999999999999999999999999 78999999999999
Q ss_pred CCC
Q 015291 407 GYR 409 (409)
Q Consensus 407 gys 409 (409)
|||
T Consensus 314 gys 316 (331)
T 2g82_O 314 GYA 316 (331)
T ss_dssp HHH
T ss_pred hhH
Confidence 996
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=3.3e-104 Score=802.29 Aligned_cols=322 Identities=65% Similarity=1.073 Sum_probs=309.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||||||||||.++|+|.++..++++||+||++.++++++|||+|||+||+|.++++. +++.|.++|+.|.++++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEE-eCCeEEECCeEEEEEec
Confidence 56899999999999999999998733569999999999999999999999999999999997 47889999999999999
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEecCCccccCcCCCcEEecCCcchh
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP-~vV~gVN~~~~~~~~~~IISnaSCTTn 243 (409)
++|++++|++.++|+||||||.|.+++++++|+++||||||||+|+++ ++| ++|||||++.|++.+++||||||||||
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d-~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKA-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCC-CCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 999999998889999999999999999999999999999999999873 478 999999999998733789999999999
Q ss_pred hhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecC
Q 015291 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVP 323 (409)
Q Consensus 244 ~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVP 323 (409)
||+|++|+||++|||++++|||||++||+|+++|++|+|||++|++++||||++||++++++||||||+|||+++|+|||
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVP 238 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccchhhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeC
Q 015291 324 TPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYD 403 (409)
Q Consensus 324 v~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyD 403 (409)
|++||++||+++++++ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||
T Consensus 239 t~~gs~~dlt~~l~k~-~t~eeI~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~wyD 317 (380)
T 2d2i_A 239 TPNVSVVDLVVQVEKP-TITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYD 317 (380)
T ss_dssp CSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEC
T ss_pred cCCEEEEEEEEEECCc-CCHHHHHHHHHHHhhCCCCCccCCcCCCeeeeeeCCCCcceEEecccCceecCCEEEEEEEEC
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 015291 404 NEWGYR 409 (409)
Q Consensus 404 NE~gys 409 (409)
||||||
T Consensus 318 Ne~gys 323 (380)
T 2d2i_A 318 NEWGYS 323 (380)
T ss_dssp TTHHHH
T ss_pred CCcchH
Confidence 999996
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=1.4e-103 Score=787.72 Aligned_cols=320 Identities=82% Similarity=1.302 Sum_probs=309.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEE-EecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVK-IVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~-~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||||||||||.++|+|.++.+|++|||+|||..++++++|||+|||+||+|.+++. . +++.|.++|+.|.++++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~-~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTA-GDSAISVDGKVIKVVSD 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEEC-TTSEEEETTEEEEEECC
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEe-cCCeEEECCeEEEEEec
Confidence 379999999999999999999886678999999999999999999999999999999998 5 46789999999999999
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhh
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~ 244 (409)
++|++++|++.++|+||||||.|.+++++++|+++|||+|++|+|+++ |+|++|||||++.|++. ++|||||||||||
T Consensus 80 ~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~-d~p~~V~GVN~~~~~~~-~~IIsNasCtTn~ 157 (337)
T 1rm4_O 80 RNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKG-DIPTYVVGVNEEGYTHA-DTIISNASCTTNC 157 (337)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCCBCCTTTTGGGCCTT-CSEEECCCHHHHH
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccC-CCCeEeecCCHHHhCCC-CeEEECCChHHHH
Confidence 999999999889999999999999999999999999999999999874 68999999999999865 7899999999999
Q ss_pred hHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCc
Q 015291 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPT 324 (409)
Q Consensus 245 Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv 324 (409)
|+|++|+||++|||+++.|||||++||+|+++|++|+||||+|++++||||++||++++++|+||||+|||+++|+||||
T Consensus 158 lap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~ 237 (337)
T 1rm4_O 158 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 237 (337)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEEecCCccchhhcchhhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCC
Q 015291 325 PNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDN 404 (409)
Q Consensus 325 ~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDN 404 (409)
++||++||+++++++ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++++|+++||||
T Consensus 238 ~~gs~~dl~~~l~k~-~t~eei~~~lk~a~~~~lkgil~y~~~~~vs~d~~~~~~s~i~d~~~~~~~~~~~~k~~~wydn 316 (337)
T 1rm4_O 238 PNVSVVDLVVQVSKK-TFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDN 316 (337)
T ss_dssp SSCEEEEEEEEESSC-CCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECT
T ss_pred CCEEEEEEEEEECCC-CCHHHHHHHHHHHhhCCcCceecCcCCCeeecccCCCCcccccchhccceecCCEEEEEEEECC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 015291 405 EWGYR 409 (409)
Q Consensus 405 E~gys 409 (409)
|||||
T Consensus 317 e~gys 321 (337)
T 1rm4_O 317 EWGYS 321 (337)
T ss_dssp THHHH
T ss_pred Cccch
Confidence 99996
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=8.6e-103 Score=782.91 Aligned_cols=322 Identities=66% Similarity=1.079 Sum_probs=309.7
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||||||||||.++|+|.++..++|+||+|||+.++++++|||+|||+||+|.++++. +++.|.++|+.|.++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEE-cCCeeeecCceEEEEec
Confidence 56899999999999999999998733569999999999999999999999999999999997 47889999999999999
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEecCCccccCcCCCcEEecCCcchh
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP-~vV~gVN~~~~~~~~~~IISnaSCTTn 243 (409)
+||++++|++.++|+||||||.|.+++++++|+++|+||||||+|+++ ++| ++|||||++.|++..++||||||||||
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~-~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKG-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCC-CCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 999999999889999999999999999999999999999999999873 578 999999999998743789999999999
Q ss_pred hhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecC
Q 015291 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVP 323 (409)
Q Consensus 244 ~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVP 323 (409)
||+|++||||++|||++++|||||+|||+|+++|++|+||||+|++++||||++||++++++||+|+|+|||+++|+|||
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP 238 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccchhhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeC
Q 015291 324 TPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYD 403 (409)
Q Consensus 324 v~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyD 403 (409)
|++||++|++++++++ +++|||+++|+++++++|||||+|+|+|+||+||+|++||+|||+.+|++++++|+|+++|||
T Consensus 239 ~~~g~~~dl~v~l~k~-~t~eeI~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 317 (339)
T 3b1j_A 239 TPNVSVVDLVVQVEKP-TITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYD 317 (339)
T ss_dssp CSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHSTTBTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEEC
T ss_pred cCCEEEEEEEEEEcCc-CCHHHHHHHHHHhhcCCCCCccCccCCceeehhcCCCCCceEEecccCceecCCEEEEEEEeC
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 015291 404 NEWGYR 409 (409)
Q Consensus 404 NE~gys 409 (409)
||||||
T Consensus 318 ne~gys 323 (339)
T 3b1j_A 318 NEWGYS 323 (339)
T ss_dssp TTHHHH
T ss_pred CCcchH
Confidence 999996
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.4e-101 Score=772.70 Aligned_cols=318 Identities=60% Similarity=0.932 Sum_probs=306.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~~ 166 (409)
+||||||||||||.++|+|.++ ++++||+||+..++++++|||+|||+||+|.++++. +++.|.++|+.|.++++++
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~--~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKN--PDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSV-NGNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTC--TTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCC--CCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEE-ccCcEEECCEEEEEEecCC
Confidence 7999999999999999999987 569999999988999999999999999999999997 4788999999999998889
Q ss_pred CCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhhhH
Q 015291 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (409)
Q Consensus 167 p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~La 246 (409)
|++++|++.++|+||||||.|.+++++++|+++||||||||+|+++ ++|++|||||++.|++..++||||||||||||+
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d-~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~la 157 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKN-EDITIVMGVNQDKYDPKAHHVISNASCTTNCLA 157 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCcc-CCCEeccccCHHHhCccCCeEEECCChHHHHHH
Confidence 9999999899999999999999999999999999999999999874 579999999999998622689999999999999
Q ss_pred HHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCccc
Q 015291 247 PFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTPN 326 (409)
Q Consensus 247 pvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv~~ 326 (409)
|++||||++|||+++.|||||++||+|+++|++|+|+|++|++++||||++||+++|++++||+|+|||+++|+||||++
T Consensus 158 p~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~ 237 (334)
T 3cmc_O 158 PFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPN 237 (334)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhcCceeeeEEEEEeccchhhhccccccccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCCCC
Q 015291 327 VSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEW 406 (409)
Q Consensus 327 gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDNE~ 406 (409)
||++|++++++++ +++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||
T Consensus 238 gs~~~l~~~l~k~-~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 316 (334)
T 3cmc_O 238 VSVVDLVAELEKE-VTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNET 316 (334)
T ss_dssp CEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTH
T ss_pred EEEEEEEEEECCC-CCHHHHHHHHHHHhhCccCCcccCCCCCEeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCc
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 015291 407 GYR 409 (409)
Q Consensus 407 gys 409 (409)
|||
T Consensus 317 gys 319 (334)
T 3cmc_O 317 GYS 319 (334)
T ss_dssp HHH
T ss_pred hhh
Confidence 996
No 17
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.5e-100 Score=763.18 Aligned_cols=318 Identities=55% Similarity=0.863 Sum_probs=306.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~~ 166 (409)
+||||||||||||.++|+|.++..|+++||+||+..++++++|||+|||+||+|.++++. +++.|.++|+.+.++++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEY-TENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEE-cCCEEEECCeEEEEEecCC
Confidence 589999999999999999998732569999999988999999999999999999999997 5889999999999988889
Q ss_pred CCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEecCCccccCcCCCcEEecCCcchhhh
Q 015291 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (409)
Q Consensus 167 p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP-~vV~gVN~~~~~~~~~~IISnaSCTTn~L 245 (409)
|++++|++.++|+||||||.|.+++++++|+++|+||||||+|++ |+| ++|||||++.|++. ++||||||||||||
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~--d~p~~~V~eVN~~~i~~~-~~iIsNpsCttn~l 156 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK--GEDITVVIGCNEDQLKPE-HTIISCASCTTNSI 156 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB--SCSEECCTTTTGGGCCTT-CCEEECCCHHHHHH
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC--CCCceEEeccCHHHhCCC-CcEEECCccHHHHH
Confidence 999999988999999999999999999999999999999999986 578 99999999999864 78999999999999
Q ss_pred HHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCcc
Q 015291 246 APFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTP 325 (409)
Q Consensus 246 apvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv~ 325 (409)
+|+||||+++|||+++.|||||++||+|+++|++|+|+||+|++++||||++||+++|++++||+|+|||+++|+||||+
T Consensus 157 ap~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~ 236 (332)
T 1hdg_O 157 APIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTP 236 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcccccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCCC
Q 015291 326 NVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE 405 (409)
Q Consensus 326 ~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDNE 405 (409)
+||+++++++++++ +++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++++|+++|||||
T Consensus 237 ~g~l~~l~~~l~k~-~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne 315 (332)
T 1hdg_O 237 DGSITDLTVLVEKE-TTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNE 315 (332)
T ss_dssp SCEEEEEEEEESSC-CCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEETTTEEEEEEEECTT
T ss_pred CcEEEEEEEEECCC-CCHHHHHHHHHHHhhcccCCcccccCCCeeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCC
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 015291 406 WGYR 409 (409)
Q Consensus 406 ~gys 409 (409)
||||
T Consensus 316 ~gys 319 (332)
T 1hdg_O 316 YGYS 319 (332)
T ss_dssp HHHH
T ss_pred ccch
Confidence 9996
No 18
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=1.6e-100 Score=769.80 Aligned_cols=321 Identities=46% Similarity=0.791 Sum_probs=304.4
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC-CCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 84 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd-~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
++++||||||||||||.++|+|.++ +++|||+||| ..++++++|||+|||+||+|.++++. +++.|.++|+.|.++
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~--p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~-~~~~l~v~g~~i~v~ 91 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMER--NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SGKDLCINGKVVKVF 91 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTC--SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEE-CC-CEEETTEEEEEE
T ss_pred CcceEEEEECCCHHHHHHHHHHHcC--CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEE-eCCEEEECCeEEEEE
Confidence 3458999999999999999999987 5699999999 67999999999999999999999987 578899999999999
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcch
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTT 242 (409)
++++|++++|++.++|+||||||.|.+++++++|+++|+||||||+|+++ ++|++|||||++.|++.+++|||||||||
T Consensus 92 ~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd-~~p~~V~GVN~~~~~~~~~~IISNpsCtT 170 (354)
T 3cps_A 92 QAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKD-NVPMYVMGVNNTEYDPSKFNVISNASCTT 170 (354)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSS-CCCBCCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCC-CCCEEEeccCHHHhCcCCCcEEECCCcHH
Confidence 99999999998789999999999999999999999999999999999864 57999999999999863368999999999
Q ss_pred hhhHHHHHHHHhhcCccEEEeeeeeccccccccccccc---hhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEE
Q 015291 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH---RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIA 319 (409)
Q Consensus 243 n~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~---~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~a 319 (409)
|||+|++|||+++|||+++.|||||++||+|+++|+++ +|||++|++++||||+++|+++|++++||+|+|||++++
T Consensus 171 n~lap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a 250 (354)
T 3cps_A 171 NCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMA 250 (354)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEE
T ss_pred HHHHHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEE
Confidence 99999999999999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred EecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEE
Q 015291 320 LRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVV 399 (409)
Q Consensus 320 vRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~ 399 (409)
+||||++||++||+++++++ +++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++|+||+
T Consensus 251 ~rVP~~~gs~~dl~~~l~k~-~t~eeI~~~~k~a~~~~lkgil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~ 329 (354)
T 3cps_A 251 IRVPTPDVSVVDLTCKLAKP-ASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLI 329 (354)
T ss_dssp EEESCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEE
T ss_pred EEeccCCEEEEEEEEEECCC-CCHHHHHHHHHHHhhCCCCCccCccCCCeeeEEEcCCCcceEEecccCeEecCCEEEEE
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999988999999
Q ss_pred EEeCCCCCCC
Q 015291 400 AWYDNEWGYR 409 (409)
Q Consensus 400 ~WyDNE~gys 409 (409)
+|||||||||
T Consensus 330 ~wydne~gys 339 (354)
T 3cps_A 330 SWYDNESGYS 339 (354)
T ss_dssp EEECTTHHHH
T ss_pred EEECCCcchH
Confidence 9999999996
No 19
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1.2e-99 Score=757.67 Aligned_cols=316 Identities=48% Similarity=0.809 Sum_probs=305.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~~ 166 (409)
+||||||||||||.++|+|.++ ++++||+||+..+.++++|||+|||+||+|.+.++. +++.|.+||+.|+++++++
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~--~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKR--SDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcC--CCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEE-cCCEEEECCEEEEEEEcCC
Confidence 7999999999999999999987 569999999988999999999999999999999987 5788999999999999999
Q ss_pred CCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhhhH
Q 015291 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (409)
Q Consensus 167 p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~La 246 (409)
|+++||++.++|+||||||.|.++++++.|+++|+|+|++|+|+++ ++|++|||||++.|+ . ++||||||||||||+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~-~~p~~V~GvN~~~~~-~-~~iIsNpsCtt~~la 155 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKD-NTPMFVKGANFDKYA-G-QDIVSNASCTTNCLA 155 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCC-S-CSEEECCCHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCC-CCCeEeecCCHHHhC-C-CCEEEcCChHHHHHH
Confidence 9999998889999999999999999999999999999999999843 579999999999998 3 789999999999999
Q ss_pred HHHHHHHhhcCccEEEeeeeeccccccccccccc-hhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEecCcc
Q 015291 247 PFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTP 325 (409)
Q Consensus 247 pvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRVPv~ 325 (409)
|+|||||++|||+++.|||||++||+|+++|++| +|+||+|++++||||+++|+++|++++||+|+|||+++|+||||+
T Consensus 156 p~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 235 (330)
T 1gad_O 156 PLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTP 235 (330)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCS
T ss_pred HHHHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccc
Confidence 9999999999999999999999999999999998 789999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCCC
Q 015291 326 NVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE 405 (409)
Q Consensus 326 ~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDNE 405 (409)
+||+++++++++++ +++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++|||||
T Consensus 236 ~g~~~~l~~~l~k~-~t~eei~~~~k~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne 314 (330)
T 1gad_O 236 NVSVVDLTVRLEKA-ATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNE 314 (330)
T ss_dssp SCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEETTTCEEEETTEEEEEEEECTT
T ss_pred cEEEEEEEEEECCC-CCHHHHHHHHHHHhcCCCCCEEeeECCceeeeeECCCCcceEEecccCeEecCCEEEEEEEECCC
Confidence 99999999999999 99999999999999999999999999999999999999999999999999988999999999999
Q ss_pred CCCC
Q 015291 406 WGYR 409 (409)
Q Consensus 406 ~gys 409 (409)
||||
T Consensus 315 ~gys 318 (330)
T 1gad_O 315 TGYS 318 (330)
T ss_dssp HHHH
T ss_pred chhh
Confidence 9996
No 20
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=1.9e-99 Score=758.69 Aligned_cols=319 Identities=43% Similarity=0.743 Sum_probs=295.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHh---CCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHG---RKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~---~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
|++||||||||+|||.++|+|.+ + ++++||+||+..++++++|||+|||+||+|.++++. +++.|.++|+.|.+
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~--~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRR--AEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ-ERDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGG--GTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCC--CCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEE-cCCeeEECCEEEEE
Confidence 56899999999999999999998 6 469999999998999999999999999999999997 57889999999999
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEecCCccccCcCCCcEEecCCc
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASC 240 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP-~vV~gVN~~~~~~~~~~IISnaSC 240 (409)
+++++|++++|++.++|+||||||.|.+++.+++|+++|+||||||+|+. .|+| ++|||||++.|+.. ++|||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad-~d~p~~~V~gvN~~~~~~~-~~iIsnpsC 155 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGS-NDLDATVVYGVNQDQLRAE-HRIVSNASC 155 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCC-TTSSEECCTTTSGGGCCTT-CCEEECCCH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEecccc-CCCCceeecccCHHHhcCC-CCEEECCCc
Confidence 98899999999888999999999999999999999999999999999982 2678 99999999999864 689999999
Q ss_pred chhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEE
Q 015291 241 TTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIAL 320 (409)
Q Consensus 241 TTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~av 320 (409)
|||||+|++||||++|||+++.|||+|++||+|+++|++|+||||+|++++||||++||++++++++||+|+||++++++
T Consensus 156 ttn~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~ 235 (339)
T 2x5j_O 156 TTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAV 235 (339)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEECCC-----------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHccCcceeeEEEEEeccccccccccccccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEE
Q 015291 321 RVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVA 400 (409)
Q Consensus 321 RVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~ 400 (409)
||||++||+++++++++++ +++|||+++|+++++++|||||+|+|+|+||+||+|++||+|||+.+|++++++++|+++
T Consensus 236 rVP~~~g~~~~l~v~l~k~-~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~ 314 (339)
T 2x5j_O 236 RVPTINVTAIDLSVTVKKP-VKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLV 314 (339)
T ss_dssp ECSSCSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEEEEEEEETTTEEEEEE
T ss_pred EecccCcEEEEEEEEECCC-CCHHHHHHHHHHHhhcCCCcEEcccCCcccccccCCCCCceEEEcccceeccCCEEEEEE
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCC
Q 015291 401 WYDNEWGYR 409 (409)
Q Consensus 401 WyDNE~gys 409 (409)
|||||||||
T Consensus 315 wydne~gys 323 (339)
T 2x5j_O 315 WCDNEWGFA 323 (339)
T ss_dssp EECHHHHHH
T ss_pred EeCCCcccH
Confidence 999999996
No 21
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=1.1e-98 Score=752.60 Aligned_cols=319 Identities=48% Similarity=0.814 Sum_probs=305.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhhcccccccccC-ceEEEecCCeEEECCeEEEEE
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFK-ADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~-~~~~~~a~Ll~yDS~~G~f~-~~v~~~~~~~l~v~gk~I~v~ 162 (409)
|++||||||||||||.++|+|.++ ++++||+|||+ .++++++|||+|||+||+|+ +.++..+++.|.++|+.|.++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~--p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred CceEEEEECcCHHHHHHHHHHhCC--CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 568999999999999999999987 56999999995 79999999999999999999 888751367899999999999
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcch
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTT 242 (409)
++++|++++|++.++|+||||||.|.+++.+++|+++|+||||||+|++ |+|++|||||++.|++. ++|||||||||
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~--d~p~~V~gvN~~~~~~~-~~iIsnpsCtt 156 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTT 156 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHH
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC--CCCEEEeccCHHHhCCC-CcEEECCChHH
Confidence 8899999999888999999999999999999999999999999999985 58999999999999864 78999999999
Q ss_pred hhhHHHHHHHHhhcCccEEEeeeeeccccccccccccc-hhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEe
Q 015291 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALR 321 (409)
Q Consensus 243 n~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avR 321 (409)
|||+|++||||++|||+++.|||+|++||+|+++|++| +|||++|++++||||+++|+++|++++||+|+||++++++|
T Consensus 157 ~~la~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~r 236 (337)
T 3e5r_O 157 NCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFR 236 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEE
Confidence 99999999999999999999999999999999999998 69999999999999999999999999999999999999999
Q ss_pred cCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEE
Q 015291 322 VPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAW 401 (409)
Q Consensus 322 VPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~W 401 (409)
|||++||++||+++++++ +++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++++|+++|
T Consensus 237 VP~~~g~~~~l~~~l~k~-~t~eei~~~~~~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~w 315 (337)
T 3e5r_O 237 VPTVDVSVVDLTVRIEKA-ASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAW 315 (337)
T ss_dssp ESCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEE
T ss_pred eccCCeEEEEEEEEECCC-ccHHHHHHHHHHHhhCCCCCcccCCCCCeeeeeecCCCCceEEecccCcEecCCEEEEEEE
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999998899999999
Q ss_pred eCCCCCCC
Q 015291 402 YDNEWGYR 409 (409)
Q Consensus 402 yDNE~gys 409 (409)
||||||||
T Consensus 316 ydne~gys 323 (337)
T 3e5r_O 316 YDNEWGYS 323 (337)
T ss_dssp ECTTHHHH
T ss_pred eCCCcchH
Confidence 99999996
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=3.1e-98 Score=748.64 Aligned_cols=318 Identities=46% Similarity=0.795 Sum_probs=305.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~-~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
|++||||||||||||.++|+|.++ ++++||+|||+ .+.++++||++|||+||+|.+.++. +++.|.++|+.|++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~--~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~-~~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNS--GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGNPITIFQ 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH--CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CceEEEEEccCHHHHHHHHHHHcC--CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEE-cCCeEEECCeEEEEEe
Confidence 568999999999999999999886 56999999995 7999999999999999999999987 4788999999999999
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchh
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn 243 (409)
+++|++++|++.++|+||||||.|.+++.+++|+++|+|+|++|+|.+ ++|++|||||++.|++. ++||||||||||
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~--~~p~~V~gvN~~~~~~~-~~iIsnpsCtt~ 155 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA--DAPMFVMGVNHEKYDNS-LKIISNASCTTN 155 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CSEEECCCHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCC--CCCeEEeccCHHHhCCC-CCEEECCChHHH
Confidence 899999999888999999999999999999999999999999999964 58999999999999864 789999999999
Q ss_pred hhHHHHHHHHhhcCccEEEeeeeeccccccccccccc-hhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEec
Q 015291 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRV 322 (409)
Q Consensus 244 ~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRV 322 (409)
||+|+|||||++|||++++|||+|++||+|+++|++| +|+||+|++++||||+++|++++++|+||+|+||++++++||
T Consensus 156 ~l~~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rV 235 (335)
T 1u8f_O 156 CLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRV 235 (335)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEE
T ss_pred HHHHHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEe
Confidence 9999999999999999999999999999999999998 799999999999999999999999999999999999999999
Q ss_pred CccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCCceeeCCCeEEEEEEe
Q 015291 323 PTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWY 402 (409)
Q Consensus 323 Pv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~Wy 402 (409)
||++||+++++++++++ +++|||+++|+++++++|||||+|+|+|+||+||+|++||+|||+.+|++++++++||++||
T Consensus 236 P~~~g~~~~l~~~l~~~-~t~eei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wy 314 (335)
T 1u8f_O 236 PTANVSVVDLTCRLEKP-AKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWY 314 (335)
T ss_dssp SCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEE
T ss_pred ccCCEEEEEEEEEECCC-CCHHHHHHHHHHHhhCccCcEEcccCCCcceeeecCCCCceEEeCCCCEEecCCEEEEEEEE
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999988999999999
Q ss_pred CCCCCCC
Q 015291 403 DNEWGYR 409 (409)
Q Consensus 403 DNE~gys 409 (409)
|||||||
T Consensus 315 dne~gy~ 321 (335)
T 1u8f_O 315 DNEFGYS 321 (335)
T ss_dssp CTTHHHH
T ss_pred cCcchhH
Confidence 9999996
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=7.7e-61 Score=480.09 Aligned_cols=242 Identities=20% Similarity=0.275 Sum_probs=215.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhccc--cccccc--CceE-EEecCCeEEECCeEE
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTF--KADV-KIVDNETISVDGKLI 159 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yD--S~~G~f--~~~v-~~~~~~~l~v~gk~I 159 (409)
|++||||||||||||.++|+|.++ ++++||+|||. ++++++||++|| ++||+| ++++ +. .++.|.++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~--~~~evvaV~d~-~~~~~~~l~~~dg~s~~g~~~~~~~v~~~-~~~~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQ--DDMEVIGVTKT-KPDFEARLAVEKGYKLFVAIPDNERVKLF-EDAGIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSCCHHHHHHH-HHTTCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecC-CHHHHHHHHHhcCCccccccCCCceeecc-cCCeEEECC---
Confidence 458999999999999999999987 45999999997 589999999999 999998 5555 33 244566655
Q ss_pred EEEecCCCCCCCccccCccEEEeCCCCCCChhhHH-HHHHcCCCEEEEeCCCCCCCCC-eEEecCCccccCcCCCcEEec
Q 015291 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG-KHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSN 237 (409)
Q Consensus 160 ~v~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~-~hl~aGakkVVISaps~~~dvP-~vV~gVN~~~~~~~~~~IISn 237 (409)
+++++.| ++|+||||||.+.++++++ .|+++| ++||+|+|++++++| +||||||++.|+. ++||||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~--~~iIsn 141 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG--KDYVRV 141 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT--CSEEEE
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc--CCEEec
Confidence 3445556 7999999999999999996 999999 569999998643489 9999999999974 689999
Q ss_pred CCcchhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecC----CCchHHHHHHHccccCC
Q 015291 238 ASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVSLVMPQLKG 313 (409)
Q Consensus 238 aSCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~----~tGaakav~kVlPeL~g 313 (409)
||||||||+|+||+||++|||++++|||||++||. + +++|++++||||+ ++|++|+++||||+|+|
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~-------~---~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~g 211 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRAADP-------N---DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEG 211 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCT-------T---CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTT
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeeccCc-------C---cchhhHHhcccCCCCCCCCcchHHHHHhhhcccc
Confidence 99999999999999999999999999999999982 2 5678999999999 99999999999999999
Q ss_pred CeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccC
Q 015291 314 KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG 356 (409)
Q Consensus 314 kl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~ 356 (409)
|++++|+||||++||+++|+++|+++ +++|||+++|++++..
T Consensus 212 kl~~~avRVPv~~gh~~~l~v~l~~~-~t~eei~~~l~~a~~v 253 (343)
T 2yyy_A 212 KILTSAVIVPTTLMHMHTLMVEVDGD-VSRDDILEAIKKTPRI 253 (343)
T ss_dssp SEEEEEEEESCSSCEEEEEEEEEESC-CCHHHHHHHHHHSTTE
T ss_pred ceeeEEEEecccceEEEEEEEEECCC-CCHHHHHHHHHhCCCC
Confidence 99999999999999999999999999 9999999999998753
No 24
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=6.8e-50 Score=399.90 Aligned_cols=291 Identities=16% Similarity=0.160 Sum_probs=229.4
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
|++||+|+| ||+|||.++|+|.++..+.++++++++.. + .++.+.++|+.+.+..
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~------------~------------~g~~~~~~g~~i~~~~ 60 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE------------S------------AGQRMGFAESSLRVGD 60 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT------------T------------TTCEEEETTEEEECEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC------------C------------CCCccccCCcceEEec
Confidence 457999999 99999999999997766779999998631 0 1234557777777643
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCC-cEEecCCcch
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVA-NIVSNASCTT 242 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~-~IISnaSCTT 242 (409)
.+++. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++..++++|++|||||++.|+..++ +|||||||+|
T Consensus 61 -~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 135 (340)
T 2hjs_A 61 -VDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVA 135 (340)
T ss_dssp -GGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHHH
T ss_pred -CCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHHH
Confidence 34543 75 899999999999999999999999998777788765667899999999999975312 7999999999
Q ss_pred hhhHHHHHHHHhhcCccEEEeeeeeccccccc-cccccc---hhhhhh---------hccccceecCCC-----c-----
Q 015291 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASH---RDLRRA---------RAAALNIVPTST-----G----- 299 (409)
Q Consensus 243 n~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~-llD~~~---~d~r~~---------Raaa~NIIP~~t-----G----- 299 (409)
|||+|+|+||+++|||+++.|||+|+|||+|+ .+|.++ +|||++ |++++||||+++ |
T Consensus 136 t~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee 215 (340)
T 2hjs_A 136 AELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAIE 215 (340)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHHH
T ss_pred HHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccHHH
Confidence 99999999999999999999999999999996 578766 677764 789999999987 7
Q ss_pred --hHHHHHHHccccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCC
Q 015291 300 --AAKAVSLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCS 377 (409)
Q Consensus 300 --aakav~kVlPeL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~ 377 (409)
..++++||+|++++|++++|+||||++||+++++++++++ +++|||+++|++++ +--++...+-|-...|..|.
T Consensus 216 ~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~-~t~eei~~~~~~~~---~V~v~~~~~~p~~~~~v~g~ 291 (340)
T 2hjs_A 216 RRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEP-VDLAAVTRVLDATK---GIEWVGEGDYPTVVGDALGQ 291 (340)
T ss_dssp HHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSC-CCHHHHHHHHHHST---TEEECCTTCCCCCCCCCTTS
T ss_pred HHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCC-CCHHHHHHHHhcCC---CcEEeCCCCCCccHHHcCCC
Confidence 5556788999999999999999999999999999999999 99999999999643 22222211112111155555
Q ss_pred CcceeecCCCceeeCCCeEEEEEEeCC-CCCCC
Q 015291 378 DVSSTIDSSLTMVMGDDMVKVVAWYDN-EWGYR 409 (409)
Q Consensus 378 ~~S~i~d~~~t~~~~~~~vKl~~WyDN-E~gys 409 (409)
.+..|--...... .++.+.+++|.|| .||.|
T Consensus 292 ~~~~vgr~r~~~~-~~~~l~~~~~~DNl~kGAA 323 (340)
T 2hjs_A 292 DETYVGRVRAGQA-DPCQVNLWIVSDNVRKGAA 323 (340)
T ss_dssp SCEEEEEEEECSS-CTTEEEEEEEECCCCCCCH
T ss_pred CEEEEEEEEecCC-CCCEEEEEEEechHHHHHH
Confidence 5444422221111 3467999999999 77753
No 25
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-49 Score=396.57 Aligned_cols=281 Identities=20% Similarity=0.242 Sum_probs=220.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
||||||| ||+|||.++|+|.++..+.++++ ++. |. +. .|+.+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~-------------~~~--s~--------~~-~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELR-------------LYA--SP--------RS-AGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCE-------------EEE--CG--------GG-SSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEE-------------Eee--cc--------cc-CCCEEEEcCceEEEEeC-
Confidence 5899999 99999999999997754334332 222 10 01 45778899999999775
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEecCCccccCcCCCcEEecCCcchhh
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap-s~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~ 244 (409)
+++ +| ++|+||+|+|.|.++++++.|+++|++.|..|++ ++++|+|++|||||++.|+.. ++|||||||+|||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~-~~iIanp~C~tt~ 129 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQH-RGIIANPNCTTAI 129 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGC-SSEEECCCHHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCC-CCEEECCCHHHHH
Confidence 555 58 7999999999999999999999999943333443 345578999999999999863 5799999999999
Q ss_pred hHHHHHHHHhhcCccEEEeeeeeccccc------------cccccccc-hhhhhhhccccceecCC--------CchHHH
Q 015291 245 LAPFVKVMDEELGIVKGAMTTTHSYTGD------------QRLLDASH-RDLRRARAAALNIVPTS--------TGAAKA 303 (409)
Q Consensus 245 Lapvlk~L~~~fGI~~~~mTTiha~Tg~------------Q~llD~~~-~d~r~~Raaa~NIIP~~--------tGaaka 303 (409)
|+|+|+||+++|||+++.|||+|+|||+ |+++|+++ +++|++|++++||||++ |+++++
T Consensus 130 ~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~~ 209 (331)
T 2yv3_A 130 LAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEMK 209 (331)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHHH
Confidence 9999999999999999999999999999 88899764 78999999999999998 888776
Q ss_pred H----HHHc--cccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCC-----eEEe
Q 015291 304 V----SLVM--PQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVP-----LVSV 372 (409)
Q Consensus 304 v----~kVl--PeL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p-----~VS~ 372 (409)
+ +|+| |+| +++++|+|||+++||+++++++++++ +++|||+++|++++- | .+.++| .--.
T Consensus 210 i~~e~~kil~~~~l--~v~~~~~rVP~~~g~~~~~~~~l~~~-~t~eei~~~~~~~~~-----v-~v~~~~~~~~~p~~~ 280 (331)
T 2yv3_A 210 VVWETHKIFGDDTI--RISATAVRVPTLRAHAEAVSVEFARP-VTPEAAREVLKEAPG-----V-EVVDEPEAKRYPMPL 280 (331)
T ss_dssp HHHHHHHHTTCTTC--EEEEECCBCSCSSEEEEEEEEEESSC-CCHHHHHHHHTTSTT-----C-CBCCBTTTTBCCCHH
T ss_pred HHHHHHHHhCCCCc--eEEEEEEEeccCceEEEEEEEEECCC-CCHHHHHHHHHcCCC-----e-EEEeCCCcCCCCChh
Confidence 7 8999 888 59999999999999999999999999 999999999998542 1 122111 0012
Q ss_pred cCCCCCcceeecCCCceeeCCCeEEEEEEeCCC-CCC
Q 015291 373 DFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE-WGY 408 (409)
Q Consensus 373 Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDNE-~gy 408 (409)
+..|..+-.|--..... ..++.+.+++|.||- +|.
T Consensus 281 ~~~g~~~~~igr~~~d~-~~~~~l~~~~~~DNl~kGA 316 (331)
T 2yv3_A 281 TASGKWDVEVGRIRKSL-AFENGLDFFVVGDQLLKGA 316 (331)
T ss_dssp HHTTCSSEEEEEEEECS-SSTTEEEEEEEEETTHHHH
T ss_pred hccCCceEEEEEEEECC-CCCCEEEEEEEechHHHHH
Confidence 55555554442111000 024678999999997 443
No 26
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=6.7e-49 Score=392.15 Aligned_cols=286 Identities=20% Similarity=0.222 Sum_probs=207.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+| ||+|||.++|+|.+++++++++++|++..+ .|..+.++|+.+.+. +
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~------------------------~G~~~~~~~~~i~~~-~ 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS------------------------EGKTYRFNGKTVRVQ-N 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT------------------------TTCEEEETTEEEEEE-E
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC------------------------CCCceeecCceeEEe-c
Confidence 47999999 999999999999988667799999986311 234455777777773 3
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEecCCccccCcCC-CcEEecCCcch
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDHEV-ANIVSNASCTT 242 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap-s~~~dvP~vV~gVN~~~~~~~~-~~IISnaSCTT 242 (409)
.+++ +|. ++|+||+|+|.+.+++.++.|+++|++.|.+|++ ++++++|++|||||++.|+..+ .+|||||||+|
T Consensus 58 ~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 133 (336)
T 2r00_A 58 VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNCST 133 (336)
T ss_dssp GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCHHH
T ss_pred CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCChHH
Confidence 4443 685 8999999999999999999999999954444554 3456789999999999997521 56999999999
Q ss_pred hhhHHHHHHHHhhcCccEEEeeeeeccccccc-cccccch------------hhhhhhccccceecCCC-----ch----
Q 015291 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASHR------------DLRRARAAALNIVPTST-----GA---- 300 (409)
Q Consensus 243 n~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~-llD~~~~------------d~r~~Raaa~NIIP~~t-----Ga---- 300 (409)
|||+|+|+||+++|||+++.|||+|+|||+|+ ++|.+++ ++|++|++++||||+++ |+
T Consensus 134 t~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee 213 (336)
T 2r00_A 134 IQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTKEE 213 (336)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBHHH
T ss_pred HHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccHHH
Confidence 99999999999999999999999999999975 8888764 67899999999999974 74
Q ss_pred ---HHHHHHHccccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCC
Q 015291 301 ---AKAVSLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCS 377 (409)
Q Consensus 301 ---akav~kVlPeL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~ 377 (409)
.++++|+||++++|++++|+||||++||+++++++++++ +++|||+++|++++ +--++...+-|-.-.|..|.
T Consensus 214 ~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~-~t~~ei~~~~~~~~---~v~v~~~~~~p~~~~~v~g~ 289 (336)
T 2r00_A 214 MKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAP-IDAEQVMDMLEQTD---GIELFRGADFPTQVRDAGGK 289 (336)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSC-CCHHHHHHHHHHST---TEEECCCCSSGGGCCCCCSS
T ss_pred HHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCC-CCHHHHHHHHHhCC---CeEEECCCCCCcCHHHhCCC
Confidence 566788999999999999999999999999999999999 99999999999843 11122111112111144444
Q ss_pred CcceeecCCCceeeCCCeEEEEEEeCCC
Q 015291 378 DVSSTIDSSLTMVMGDDMVKVVAWYDNE 405 (409)
Q Consensus 378 ~~S~i~d~~~t~~~~~~~vKl~~WyDNE 405 (409)
.+-.|--...... .++.+.++++.||-
T Consensus 290 ~~~~vgr~~~d~~-~~~~l~~~~~~DNl 316 (336)
T 2r00_A 290 DHVLVGRVRNDIS-HHSGINLWVVADNV 316 (336)
T ss_dssp SCEEEEEEEEETT-EEEEEEEEEEESSH
T ss_pred ceEEEEEEEecCC-CCCEEEEEEEehhH
Confidence 4433310000000 13468888999994
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.7e-49 Score=395.25 Aligned_cols=272 Identities=18% Similarity=0.251 Sum_probs=219.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhccc--ccccccCceE-EEecCCeEEECCeEEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADV-KIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yD--S~~G~f~~~v-~~~~~~~l~v~gk~I~v~~ 163 (409)
+||||||+|+|||.++|+|.++ ++++|++|++. +++..+++++|| ++||.|++.+ .. .+..+.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~-~~~~l~v~~~------ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQ--DDMKVIGVSKT-RPDFEARMALKKGYDLYVAIPERVKLF-EKAGIEVAGT------ 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHH-HHTTCCCCEE------
T ss_pred eEEEEEeECHHHHHHHHHHHcC--CCcEEEEEEcC-ChhHHHHhcCCcchhhccccccceeee-cCCceEEcCC------
Confidence 7999999999999999999876 46999999997 567788999888 8999888765 22 1233444431
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCC--CeEEecCCccccCcCCCcEEecCCcc
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADI--PTYVVGVNEKDYDHEVANIVSNASCT 241 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dv--P~vV~gVN~~~~~~~~~~IISnaSCT 241 (409)
++++.| ++|+||+|||.+.+++.++.|+++|++ ||+++|.+ +|+ |++|||||++.|+. .+|||||||+
T Consensus 72 ---~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~-~d~~~~~~V~gvN~e~~~~--~~iIanp~C~ 141 (337)
T 1cf2_P 72 ---VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEK-HEDIGLSFNSLSNYEESYG--KDYTRVVSCN 141 (337)
T ss_dssp ---HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSC-HHHHSCEECHHHHGGGGTT--CSEEEECCHH
T ss_pred ---HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCC-CccCCCeEEeeeCHHHhcC--CCEEEcCCcH
Confidence 222223 799999999999999999999999964 88888763 244 99999999999974 5899999999
Q ss_pred hhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecC----CCchHHHHHHHccccCCCeeE
Q 015291 242 TNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVSLVMPQLKGKLNG 317 (409)
Q Consensus 242 Tn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~----~tGaakav~kVlPeL~gkl~g 317 (409)
||||+|+|+||+++|||+++.|||||++|+ + .+++|++++||+|+ .++.+++++|+| +| ++++
T Consensus 142 tt~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p---~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l--~v~~ 208 (337)
T 1cf2_P 142 TTGLCRTLKPLHDSFGIKKVRAVIVRRGAD-------P---AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DI--NIDT 208 (337)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEESSC-------T---TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CC--CEEE
T ss_pred HHHHHHHHHHHHHhcCcceeEEEEEEEeec-------C---CccccchhcCEEeccCCCCCcchHHHHhhh-ee--EEEE
Confidence 999999999999999999999999999987 2 24567899999999 688899999999 88 5999
Q ss_pred EEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccccccCCCeEEecCCCCCcceeecCCC--ceeeCCCe
Q 015291 318 IALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSL--TMVMGDDM 395 (409)
Q Consensus 318 ~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~~~e~p~VS~Df~~~~~S~i~d~~~--t~~~~~~~ 395 (409)
+|+||||++||+++++++++++ +++|||+++|++++... + +..+++.+..+.+++... ++..+ ++
T Consensus 209 t~~rVPv~~g~~~~~~v~l~~~-~t~eei~~~~~~~~~v~------v-----~~~~~~~~~~~~~~~~~~~~gr~r~-d~ 275 (337)
T 1cf2_P 209 MAVIVPTTLMHQHNVMVEVEET-PTVDDIIDVFEDTPRVI------L-----ISAEDGLTSTAEIMEYAKELGRSRN-DL 275 (337)
T ss_dssp EEEEESCCSCEEEEEEEEESSC-CCHHHHHHHHHHSTTEE------E-----ECTTTTCCSHHHHHHHHHHHTCGGG-CC
T ss_pred EEEEcCccCeEEEEEEEEECCC-CCHHHHHHHHHhCCCcE------E-----eccccCCCCCcchhhhhhhcCCCcc-Cc
Confidence 9999999999999999999999 99999999999986321 1 122222233333433222 44444 48
Q ss_pred EEEEEEeCC
Q 015291 396 VKVVAWYDN 404 (409)
Q Consensus 396 vKl~~WyDN 404 (409)
.++..||||
T Consensus 276 ~~~~~w~~~ 284 (337)
T 1cf2_P 276 FEIPVWRES 284 (337)
T ss_dssp CSEEEEGGG
T ss_pred hhheeehhe
Confidence 899999997
No 28
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=6.1e-47 Score=378.68 Aligned_cols=227 Identities=16% Similarity=0.218 Sum_probs=189.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~~ 166 (409)
+||||||+|+|||.++|+|.++ ++++|++|+|. +++..+++++++- +.++..++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~--p~~elvav~d~-~~~~~~~~a~~~g-----------------------~~~~~~~~ 55 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQ--PDMKLVGVAKT-SPNYEAFIAHRRG-----------------------IRIYVPQQ 55 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-SCSHHHHHHHHTT-----------------------CCEECCGG
T ss_pred eEEEEEecCHHHHHHHHHHHcC--CCCEEEEEEcC-ChHHHHHHHHhcC-----------------------cceecCcC
Confidence 7999999999999999999876 56999999997 5666777776431 01111122
Q ss_pred CCCCCccc-------------cCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCc
Q 015291 167 PLQLPWAE-------------LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVAN 233 (409)
Q Consensus 167 p~~l~W~~-------------~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~ 233 (409)
|+++ |.+ .++|+||+|||.+.+++.++.|+++|+++|++|++..+...++||+|+|++.+.. .+
T Consensus 56 ~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~--~~ 132 (340)
T 1b7g_O 56 SIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG--KK 132 (340)
T ss_dssp GHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT--CS
T ss_pred HHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC--CC
Confidence 3222 321 1699999999999999999999999999888888865433479999999876643 35
Q ss_pred EEecCCcchhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecC----CCchHHHHHHHcc
Q 015291 234 IVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVSLVMP 309 (409)
Q Consensus 234 IISnaSCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~----~tGaakav~kVlP 309 (409)
+|+|||||||||+|+||+|+++|||+++.|||+|+++. ++++ .|++.+||+|+ .+|+++++++++|
T Consensus 133 iIsnpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~-------~~~~---~~~~~~niip~~~~i~t~~a~ev~~vlp 202 (340)
T 1b7g_O 133 YIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD-------QKEV---KKGPINSLVPDPATVPSHHAKDVNSVIR 202 (340)
T ss_dssp EEEECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC-------TTCC---SCCCSSCCEESSSSSSCTHHHHHHTTST
T ss_pred CcccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC-------cccc---hHHHHcCCCCCCcCCCCCchhHHHHhCC
Confidence 99999999999999999999999999999999998863 3433 46889999998 6899999999999
Q ss_pred ccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHccc
Q 015291 310 QLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAE 355 (409)
Q Consensus 310 eL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~ 355 (409)
+|+ |+++|+||||++||+++++++++++ +++|||+++|++++.
T Consensus 203 ~l~--l~~~a~rVPv~~gh~~~l~v~l~~~-~t~eei~~~l~~a~~ 245 (340)
T 1b7g_O 203 NLD--IATMAVIAPTTLMHMHFINITLKDK-VEKKDILSVLENTPR 245 (340)
T ss_dssp TCE--EEEEEEEESCSSCEEEEEEEEESSC-CCHHHHHHHHHTCTT
T ss_pred CCc--EEEEEEEeccCCeEEEEEEEEECCC-CCHHHHHHHHHcCCC
Confidence 994 9999999999999999999999999 999999999998764
No 29
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=1.3e-46 Score=379.99 Aligned_cols=239 Identities=15% Similarity=0.157 Sum_probs=199.4
Q ss_pred eeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 87 LKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr-~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+|||||| ||+||+.++| +|.+++ +++++| |++.||| +|+ .+. .++|+.+.+...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~---~~~v~i----------~~~~~~s-~G~---~v~-------~~~g~~i~~~~~ 57 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERD---FDAIRP----------VFFSTSQ-LGQ---AAP-------SFGGTTGTLQDA 57 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTG---GGGSEE----------EEEESSS-TTS---BCC-------GGGTCCCBCEET
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCC---CCeEEE----------EEEEeCC-CCC---Ccc-------ccCCCceEEEec
Confidence 6999999 9999999999 666553 444333 6777786 775 111 144556666555
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEecCCccccCcC--CC-cEEecC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE--VA-NIVSNA 238 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps---~~~dvP~vV~gVN~~~~~~~--~~-~IISna 238 (409)
.++++ |. ++|+||+|+|.+.+++.++.|+++|+|++||++++ +++++|++|||||++.|+.. +. ++|+||
T Consensus 58 ~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp 133 (367)
T 1t4b_A 58 FDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (367)
T ss_dssp TCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeC
Confidence 44543 75 89999999999999999999999999989999886 46678999999999998742 12 699999
Q ss_pred CcchhhhHHHHHHHHhhcCccEEEeeeeeccccccc--c-----------------ccccch---hhhh-----------
Q 015291 239 SCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR--L-----------------LDASHR---DLRR----------- 285 (409)
Q Consensus 239 SCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~--l-----------------lD~~~~---d~r~----------- 285 (409)
||+|+|++|+|+||+++|+|+++.|||||++||+++ . +|.+++ |+||
T Consensus 134 ~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~ 213 (367)
T 1t4b_A 134 NCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGEL 213 (367)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccC
Confidence 999999999999999999999999999999999943 1 344665 7777
Q ss_pred -----hhccccceecCCCc------------hHHHHHHHccc-cCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHH
Q 015291 286 -----ARAAALNIVPTSTG------------AAKAVSLVMPQ-LKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVN 347 (409)
Q Consensus 286 -----~Raaa~NIIP~~tG------------aakav~kVlPe-L~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~ 347 (409)
++++++|+||+++| ..++++|++|+ .+.+++++|+||||++||+++++++++++ +++|||+
T Consensus 214 ~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~-~t~eei~ 292 (367)
T 1t4b_A 214 PVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKD-VSIPTVE 292 (367)
T ss_dssp CCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSC-CCHHHHH
T ss_pred cccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCC-CCHHHHH
Confidence 58899999999987 77888999966 55689999999999999999999999999 9999999
Q ss_pred HHHHHcc
Q 015291 348 AAFRKAA 354 (409)
Q Consensus 348 ~al~~aa 354 (409)
++|++++
T Consensus 293 ~~l~~~~ 299 (367)
T 1t4b_A 293 ELLAAHN 299 (367)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999884
No 30
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.3e-45 Score=365.68 Aligned_cols=236 Identities=21% Similarity=0.264 Sum_probs=203.2
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhccc--ccccccCceE-EEecCCeEEECCeEEEE
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADV-KIVDNETISVDGKLIKV 161 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yD--S~~G~f~~~v-~~~~~~~l~v~gk~I~v 161 (409)
|++||||||+|+|||.++|+|.++ ++++|++|+|. +.+.+.++++|| ++||+|++.+ .. .++.+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~-~~~~~~v~~----- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQ--DDMELIGITKT-KPDFEAYRAKELGIPVYAASEEFIPRF-EKEGFEVAG----- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHH-HHHTCCCSC-----
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHHHHHhcCccccccccccceec-cCCceEEcC-----
Confidence 568999999999999999999876 56999999997 577888999888 8899888665 11 111222222
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCC-C-CeEEecCCccccCcCCCcEEecCC
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGAD-I-PTYVVGVNEKDYDHEVANIVSNAS 239 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~d-v-P~vV~gVN~~~~~~~~~~IISnaS 239 (409)
+++++.| ++|+|++|||.+...+.++.|+++| |+||+++|.+. | . |++|+|||++.|+. .+||+|||
T Consensus 72 ----d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~-d~~~~~~v~~vn~~~~~~--~~ii~~~~ 140 (334)
T 2czc_A 72 ----TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA-DVAEVSFVAQANYEAALG--KNYVRVVS 140 (334)
T ss_dssp ----BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG-GGSSEEECHHHHGGGGTT--CSEEEECC
T ss_pred ----cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeeccccc-ccccceEEeccCHHHHhh--CCcEEecC
Confidence 3344434 7999999999999999999999999 56999998743 4 4 69999999999974 58999999
Q ss_pred cchhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecC---CCchHHHHHHHccccCCCee
Q 015291 240 CTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT---STGAAKAVSLVMPQLKGKLN 316 (409)
Q Consensus 240 CTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~---~tGaakav~kVlPeL~gkl~ 316 (409)
|+||||+|++++|++. |+++.|+|+|++|+.| |++|++++||||+ .+|++++++++|| |+ ++
T Consensus 141 C~t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~~----------~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~ 205 (334)
T 2czc_A 141 CNTTGLVRTLSAIREY--ADYVYAVMIRRAADPN----------DTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IE 205 (334)
T ss_dssp HHHHHHHHHHHHHGGG--EEEEEEEEEEESSCTT----------CCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EE
T ss_pred cHHHHHHHHHHHHHHH--hccccEEEEEEecCcc----------ccccChhhcEEeccCCCCchhhhhheEEE-EE--EE
Confidence 9999999999999987 9999999999999863 5679999999999 8999999999999 85 99
Q ss_pred EEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccC
Q 015291 317 GIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG 356 (409)
Q Consensus 317 g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~ 356 (409)
++|+||||++||+++++++++++ +++|||+++|+++++.
T Consensus 206 ~~~~rVPv~~~~~~~~~~~~~~~-~~~e~i~~~~~~~~~~ 244 (334)
T 2czc_A 206 TMAFVVPTTLMHVHSVMVELKKP-LTKDDVIDIFENTTRV 244 (334)
T ss_dssp EEEEEESCSSCEEEEEEEEESSC-CCHHHHHHHHHTSTTE
T ss_pred EEEEEcCCCceEEEEEEEEECCC-CCHHHHHHHHHhccCC
Confidence 99999999999999999999999 9999999999998754
No 31
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=2.5e-42 Score=347.66 Aligned_cols=279 Identities=13% Similarity=0.121 Sum_probs=207.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+| ||+|||.++|+|.++ +++++++|++..+.. .+||+.|++|.+.+ . ..+ .+ .
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~~~~~g-----~~~~~~~~~~~~~v-~---~dl-------~~-~- 75 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANH--PHFQVTLMTADRKAG-----QSMESVFPHLRAQK-L---PTL-------VS-V- 75 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTC--SSEEEEEEBCSTTTT-----SCHHHHCGGGTTSC-C---CCC-------BC-G-
T ss_pred CcEEEEECcCCHHHHHHHHHHHcC--CCcEEEEEeCchhcC-----CCHHHhCchhcCcc-c---ccc-------ee-c-
Confidence 48999999 999999999999986 569999999853221 57889999887543 1 111 12 1
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCC-------------------CCCeEEecC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGA-------------------DIPTYVVGV 222 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps---~~~-------------------dvP~vV~gV 222 (409)
+ ++ .|. ++|+||+|+|.+.+++.++.| ++|+ +||+.++ +++ +.+..|||+
T Consensus 76 -~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~ 147 (359)
T 1xyg_A 76 -K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEI 147 (359)
T ss_dssp -G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHH
T ss_pred -c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCcc
Confidence 1 22 585 899999999999999999999 9999 4555443 321 233444445
Q ss_pred CccccCcCCCcEEecCCcchhhhHHHHHHHHhhcCcc--EEEeeeeeccccccc-cccccchhhhhhhccccceecCCCc
Q 015291 223 NEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTG 299 (409)
Q Consensus 223 N~~~~~~~~~~IISnaSCTTn~Lapvlk~L~~~fGI~--~~~mTTiha~Tg~Q~-llD~~~~d~r~~Raaa~NIIP~~tG 299 (409)
|++.++. .+|||||||+|||++|+|+||+++|+|+ ++.|||+|+|||+|+ .+|.+|.++ ++.||+|+.+|
T Consensus 148 n~~~i~~--~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~-----~~~ni~py~~~ 220 (359)
T 1xyg_A 148 LREDIKK--ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANLYSE-----IAEGISSYGVT 220 (359)
T ss_dssp HHHHHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGBHHH-----HTTCCEECSCS
T ss_pred CHHHhcc--CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhhhHH-----HhcCeeccccc
Confidence 9999974 6899999999999999999999999999 999999999999998 578777654 47899999888
Q ss_pred hHHHHHHHccccC----------CCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccC-CCCccccccCCC
Q 015291 300 AAKAVSLVMPQLK----------GKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG-PLKGILAVCDVP 368 (409)
Q Consensus 300 aakav~kVlPeL~----------gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~-~lkgil~~~e~p 368 (409)
. .+++||++ .+++++++|||+++||+++++++++++ ++.|||+++|+++.++ ++--++...+-|
T Consensus 221 ~----h~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~~l~~~-~t~eei~~~~~~~y~~~~~V~v~~~~~~p 295 (359)
T 1xyg_A 221 R----HRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPG-VRTEDLHQQLKTSYEDEEFVKVLDEGVVP 295 (359)
T ss_dssp C----CTHHHHHHHHHHHHHTSCCCCEEECEEESSSSCEEEEEEEEBCTT-CCHHHHHHHHHHHHTTCSSEEECCTTCCC
T ss_pred c----cccHHHHHHHHHHhcCCCCCEEEEEEEecccceEEEEEEEEeCCC-CCHHHHHHHHHHhhCCCCCEEEcCCCCCC
Confidence 4 23344433 389999999999999999999999999 9999999999987653 322222211112
Q ss_pred eEEecCCCCCcceeecCCCceeeCCCeEEEEEEeCCC-CCC
Q 015291 369 LVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE-WGY 408 (409)
Q Consensus 369 ~VS~Df~~~~~S~i~d~~~t~~~~~~~vKl~~WyDNE-~gy 408 (409)
-. .+..|..+..|- ..... ..+.+.+++|.||- +|.
T Consensus 296 ~~-~~v~g~n~~~ig-~~~d~--~~~~l~~~~~~DNl~kGA 332 (359)
T 1xyg_A 296 RT-HNVRGSNYCHMS-VFPDR--IPGRAIIISVIDNLVKGA 332 (359)
T ss_dssp BG-GGTTTSSCEEEE-EEECS--STTEEEEEEEECTTTTTT
T ss_pred CH-HHhcCCCeEEEE-EEEeC--CCCEEEEEEEehhhhHhH
Confidence 11 144555544442 11101 23578899999997 554
No 32
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.1e-42 Score=344.55 Aligned_cols=242 Identities=17% Similarity=0.221 Sum_probs=196.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+| ||+|||.++|+|.++ ++++|++|++.. ... --+||+.|+.+. ++.+.++++.+.+ .+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~s~--~~~--g~~~~~~~~~~~-------~~~~~~~~~~~~~-~~ 69 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKH--PYLELVKVSASP--SKI--GKKYKDAVKWIE-------QGDIPEEVQDLPI-VS 69 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC--SSEEEEEEECCG--GGT--TSBHHHHCCCCS-------SSSCCHHHHTCBE-EC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhC--CCcEEEEEecCh--hhc--CCCHHHhcCccc-------ccccccCCceeEE-ee
Confidence 58999999 999999999999876 569999998431 010 123677777653 1122233334444 33
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEecCCccccCc-C--------CC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDH-E--------VA 232 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps---~~~dvP~vV~gVN~~~~~~-~--------~~ 232 (409)
.+++. |. ++|+||+|+|.+.+++.++.|+++|++ ||++++ ++++.|++|||||++.|+. + +.
T Consensus 70 ~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 70 TNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp SSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 34443 63 899999999999999999999999995 677664 4557899999999998873 1 24
Q ss_pred cEEecCCcchhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCch-HHHH---HHHc
Q 015291 233 NIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AKAV---SLVM 308 (409)
Q Consensus 233 ~IISnaSCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGa-akav---~kVl 308 (409)
+|||||||+|||++|+|+||+++|||+++.|||+|+|||+|+. +.+ .+.+++||+|+++|+ .|.+ .++|
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~~-----~~~~~~ni~py~~~~e~k~~~E~~~~l 216 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GIS-----FMAIEGNIIPYIKGEEDKIAKELTKLN 216 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SSB-----HHHHTTCCBCCCTTHHHHHHHHHHHHT
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CCC-----ChHHhCCEEeccCCcchHHHHHHHHHH
Confidence 6999999999999999999999999999999999999999986 332 357899999999995 6655 7999
Q ss_pred cccCC--------CeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHccc
Q 015291 309 PQLKG--------KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAE 355 (409)
Q Consensus 309 PeL~g--------kl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~ 355 (409)
|+|+| +++++|+|||+++||+++++++++++ ++.|||+++|+++..
T Consensus 217 ~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~-~t~eei~~~~~~~~~ 270 (350)
T 2ep5_A 217 GKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNER-INIEEIKKTLKNFKS 270 (350)
T ss_dssp CEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSC-CCHHHHHHHHHTCCC
T ss_pred hhccccccccccccEEEEeEEecccceEEEEEEEEECCC-CCHHHHHHHHHHhhc
Confidence 99877 79999999999999999999999999 999999999998863
No 33
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=5.5e-41 Score=336.53 Aligned_cols=253 Identities=18% Similarity=0.226 Sum_probs=197.0
Q ss_pred cceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC-CCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 84 VAKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 84 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd-~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
.|++||||+| ||+|||.++|+|.++ ++++|++|++ .... --++|+.|+.+.. ..+..+++.+.+
T Consensus 6 ~M~~kV~IiGAtG~iG~~llr~L~~~--p~~ev~~i~~s~~~~-----g~~~~~~~~~~~~-------~~~~~~~~~~~~ 71 (354)
T 1ys4_A 6 KMKIKVGVLGATGSVGQRFVQLLADH--PMFELTALAASERSA-----GKKYKDACYWFQD-------RDIPENIKDMVV 71 (354)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTT-----TSBHHHHSCCCCS-------SCCCHHHHTCBC
T ss_pred cccceEEEECcCCHHHHHHHHHHhcC--CCCEEEEEEcccccc-----cccHHHhcccccc-------cccccCceeeEE
Confidence 3678999999 999999999999876 5699999985 2111 0124666765521 011112222333
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEecCCccccCc-C-------
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDH-E------- 230 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps---~~~dvP~vV~gVN~~~~~~-~------- 230 (409)
.+.++++ |.+.++|+||+|+|.+.+++.++.|+++|++ ||++++ ++++.|++|||||++.|+. +
T Consensus 72 -~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~ 146 (354)
T 1ys4_A 72 -IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRG 146 (354)
T ss_dssp -EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHC
T ss_pred -EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcc
Confidence 2235544 7445899999999999999999999999984 888875 3456899999999998873 1
Q ss_pred -CCcEEecCCcchhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCch-HH---HHH
Q 015291 231 -VANIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVS 305 (409)
Q Consensus 231 -~~~IISnaSCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGa-ak---av~ 305 (409)
+.+|||||||+|||++|+|+||+++|||+++.|+|+|++||+|+. +.+ .+.+++||+|+.+|. .| ++.
T Consensus 147 ~~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~~-----~~~~~~ni~py~~~~~~k~~~Ei~ 219 (354)
T 1ys4_A 147 WDGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GVP-----SMAILDNLIPFIKNEEEKMQTESL 219 (354)
T ss_dssp CSSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TSC-----HHHHTTCCBSCCTTHHHHHHHHHH
T ss_pred cCCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--ccc-----chHHhCCEEeccCchhhHHHHHHH
Confidence 246999999999999999999999999999999999999999886 222 257899999999885 44 556
Q ss_pred HHccccCC--------CeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcccc
Q 015291 306 LVMPQLKG--------KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILA 363 (409)
Q Consensus 306 kVlPeL~g--------kl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~~lkgil~ 363 (409)
++|+++.| +++++++|||+++||+++++++++++ ++.|||+++|+++...+..++..
T Consensus 220 ~~l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~-~t~eei~~~~~~~~~~~~~~~~~ 284 (354)
T 1ys4_A 220 KLLGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEG-AEPEEIKEVMDKFDPLKDLNLPT 284 (354)
T ss_dssp HHTSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSC-CCHHHHHHHHHHCCTTTTSCCTT
T ss_pred HHHhccccccccCCCceEEEEEEEecccceEEEEEEEEECCC-CCHHHHHHHHHHhhccccccccC
Confidence 67887655 79999999999999999999999999 99999999999988423334443
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=2.9e-40 Score=330.88 Aligned_cols=232 Identities=16% Similarity=0.048 Sum_probs=188.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+| ||+|||.++|+|.++ +++++++|++..+. -.+|++.|+.|.+. . .+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elv~v~s~~~~-----g~~~~~~~~~~~g~------~-------~~~~--- 60 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH--PYLEVKQVTSRRFA-----GEPVHFVHPNLRGR------T-------NLKF--- 60 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC--TTEEEEEEBCSTTT-----TSBGGGTCGGGTTT------C-------CCBC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEECchhh-----CchhHHhCchhcCc------c-------cccc---
Confidence 48999999 999999999999876 56999999984222 14678888887642 1 1122
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCC------------------CCCeEEecCCcc
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGA------------------DIPTYVVGVNEK 225 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap-s~~~------------------dvP~vV~gVN~~ 225 (409)
.+++ .|. ++|+||+|+|.+.+++.++.|+++|++.|.+|++ ++++ +.|+.|||+|.+
T Consensus 61 ~~~~--~~~--~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~ 136 (345)
T 2ozp_A 61 VPPE--KLE--PADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYRE 136 (345)
T ss_dssp BCGG--GCC--CCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHH
T ss_pred cchh--Hhc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHH
Confidence 1222 373 8999999999999999999999999964333553 2332 345555666999
Q ss_pred ccCcCCCcEEecCCcchhhhHHHHHHHHhhcCcc--EEEeeeeeccccccc-cccccchhhhhhhccccceecCCCchHH
Q 015291 226 DYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGAAK 302 (409)
Q Consensus 226 ~~~~~~~~IISnaSCTTn~Lapvlk~L~~~fGI~--~~~mTTiha~Tg~Q~-llD~~~~d~r~~Raaa~NIIP~~tGaak 302 (409)
.++. .+|||||||+|||++|+|+||+++|+|+ ++.|+|+|+|||+|+ .+|.+|.++ +..||+|+.+|.
T Consensus 137 ~i~~--~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~-----~~~n~~py~~~~-- 207 (345)
T 2ozp_A 137 ALKG--ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASHHPE-----RAGSIRVYKPTG-- 207 (345)
T ss_dssp HHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGCHHH-----HTTCCEEEECSC--
T ss_pred Hhhc--CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccccchh-----hccccccCCCCC--
Confidence 9975 6899999999999999999999999999 999999999999986 477776553 578999998884
Q ss_pred HHHHHccccC-----C-CeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccC
Q 015291 303 AVSLVMPQLK-----G-KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG 356 (409)
Q Consensus 303 av~kVlPeL~-----g-kl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~ 356 (409)
.+++||++ + +++++++|||+++||+++++++++++ ++.|||+++|+++.++
T Consensus 208 --h~~~pei~~~l~~~~~v~~~~~rvP~~~g~~~~i~~~l~~~-~t~eei~~~~~~~y~~ 264 (345)
T 2ozp_A 208 --HRHTAEVVENLPGRPEVHLTAIATDRVRGILMTAQCFVQDG-WSERDVWQAYREAYAG 264 (345)
T ss_dssp --CTHHHHHHHTSSSCCCEEEEEEECSCSSCEEEEEEEEBCTT-CCHHHHHHHHHHHHTT
T ss_pred --ccChHhHHHHhCCCCCeEEEEEEeccccEEEEEEEEEeCCC-CCHHHHHHHHHHHhCC
Confidence 56677775 5 89999999999999999999999999 9999999999997753
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=1.1e-38 Score=321.98 Aligned_cols=239 Identities=15% Similarity=0.218 Sum_probs=191.5
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
|++||||+| +|.+|+.++|+|.++++|.++++.+... + + .|+.+.+.|+.+.+..
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-------------~---------s--aG~~~~~~~~~~~~~~ 56 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-------------R---------S--AGKSLKFKDQDITIEE 56 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-------------T---------T--TTCEEEETTEEEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-------------c---------c--CCCcceecCCCceEee
Confidence 678999999 9999999999999886666676555321 0 1 4566778887777632
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEecCCccccCcCCCcEEecCCcch
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap-s~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTT 242 (409)
-+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++ ++++++|++|||||++.++.. .+|||||||+|
T Consensus 57 -~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~-~~iIanpgC~t 130 (366)
T 3pwk_A 57 -TTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAH-NGIIACPNCST 130 (366)
T ss_dssp -CCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTC-CSEEECCCHHH
T ss_pred -CCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCC-CCeEECCCcHH
Confidence 33433 43 8999999999999999999999999954444554 356678999999999999764 68999999999
Q ss_pred hhhHHHHHHHHhhcCccEEEeeeeeccccccc-cccccch---hh-------------hhh-------hccccceecCC-
Q 015291 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASHR---DL-------------RRA-------RAAALNIVPTS- 297 (409)
Q Consensus 243 n~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~-llD~~~~---d~-------------r~~-------Raaa~NIIP~~- 297 (409)
+|++|+|+||+++|||+++.|||+|++||..+ .++..+. ++ -++ +++++|++|.+
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~ 210 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQID 210 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSS
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceec
Confidence 99999999999999999999999999999854 3332110 11 122 78999999996
Q ss_pred ----CchHHHHHHHc-------cccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcc
Q 015291 298 ----TGAAKAVSLVM-------PQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAA 354 (409)
Q Consensus 298 ----tGaakav~kVl-------PeL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa 354 (409)
+|+++++.|++ .....+++++|+|||+++||++.++++++++ ++.+|++++|++++
T Consensus 211 ~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~-~s~eei~~~l~~~~ 277 (366)
T 3pwk_A 211 VFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEV-APIEEVKAAIAAFP 277 (366)
T ss_dssp CBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSC-CCHHHHHHHHHHST
T ss_pred ccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCC-CCHHHHHHHHHhCC
Confidence 57888776554 4444579999999999999999999999999 99999999999873
No 36
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=1.9e-39 Score=326.93 Aligned_cols=242 Identities=19% Similarity=0.218 Sum_probs=188.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC--CChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~--~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
++||||+| +|.+|+.++|+|.++ |.++|+.+... .+.. +...+. +++..... . +++.+.+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~saGk~-~~~~~p-----~~~~~~~~--~------~~~~~~v~ 70 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSVGKP-YGEVVR-----WQTVGQVP--K------EIADMEIK 70 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTTTSB-HHHHCC-----CCSSSCCC--H------HHHTCBCE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhcCCC-hhHhcc-----cccccccc--c------ccccceEE
Confidence 58999999 999999999999876 56899888532 1211 111110 00000000 0 00111221
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEecCCccccCc--CC-------C
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDH--EV-------A 232 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap-s~~~dvP~vV~gVN~~~~~~--~~-------~ 232 (409)
+-+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++ ++++++|++|||||++.++. .+ .
T Consensus 71 -~~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~ 145 (359)
T 4dpk_A 71 -PTDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKG 145 (359)
T ss_dssp -ECCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSS
T ss_pred -eCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCc
Confidence 123333 43 8999999999999999999999999977777776 45668899999999999853 10 2
Q ss_pred cEEecCCcchhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCch-HH---HHHHHc
Q 015291 233 NIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVSLVM 308 (409)
Q Consensus 233 ~IISnaSCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGa-ak---av~kVl 308 (409)
+|||||||+|+|++++|+||+++|||+++.|+|+|+|||+|+. +.+. +.+++|++|+.+|. .| |+.++|
T Consensus 146 ~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~~-----~~~~~N~ipy~~~~e~k~~~Ei~kil 218 (359)
T 4dpk_A 146 FIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIPS-----LDVVDNILPLGDGYDAKTIKEIFRIL 218 (359)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSBG-----GGTTTCCEECCHHHHHHHHHHHHHHH
T ss_pred cEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--CccC-----hHHhCCeEeecCcHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999886 2322 56899999999876 44 578899
Q ss_pred cccCC----------CeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccC
Q 015291 309 PQLKG----------KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG 356 (409)
Q Consensus 309 PeL~g----------kl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~ 356 (409)
++|+| +++++|+|||+++||+++++++++++ ++.|||+++|+++.+.
T Consensus 219 ~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~-~t~eei~~~l~~~~~~ 275 (359)
T 4dpk_A 219 SEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEE-TAAEKVKETLENFRGE 275 (359)
T ss_dssp HTSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSC-CCHHHHHHHHHTCCCH
T ss_pred hhcccccccccccCCceEEEEEEecccccEEEEEEEEECCC-CCHHHHHHHHHHhhcc
Confidence 98876 79999999999999999999999999 9999999999998754
No 37
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=7e-39 Score=322.78 Aligned_cols=242 Identities=19% Similarity=0.218 Sum_probs=188.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC--CChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~--~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
++||||+| +|.+|+.++|+|.++ |.++|+.+... .+.. +...+. +++..... . +++.+.+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~saGk~-~~~~~p-----~~~~~~~~--~------~~~~~~v~ 70 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSVGKP-YGEVVR-----WQTVGQVP--K------EIADMEIK 70 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTTTSB-HHHHCC-----CCSSSCCC--H------HHHTCBCE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhcCCC-hhHhcc-----cccccccc--c------ccccceEE
Confidence 58999999 999999999999876 56899888532 1211 111110 00000000 0 00111221
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEecCCccccCc--CC-------C
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDH--EV-------A 232 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap-s~~~dvP~vV~gVN~~~~~~--~~-------~ 232 (409)
+-+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++ ++++++|++|||||++.++. .+ .
T Consensus 71 -~~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~ 145 (359)
T 4dpl_A 71 -PTDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKG 145 (359)
T ss_dssp -ECCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSS
T ss_pred -eCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCc
Confidence 123333 43 8999999999999999999999999977777776 45668899999999999853 10 2
Q ss_pred cEEecCCcchhhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCch-HH---HHHHHc
Q 015291 233 NIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVSLVM 308 (409)
Q Consensus 233 ~IISnaSCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGa-ak---av~kVl 308 (409)
+|||||||+|+|++++|+||+++|||+++.|+|+|+|||+|+. +.+. +.+++|++|+.+|. .| |+.++|
T Consensus 146 ~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~~-----~~~~~N~ipy~~~~e~k~~~Ei~kil 218 (359)
T 4dpl_A 146 FIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIPS-----LDVVDNILPLGDGYDAKTIKEIFRIL 218 (359)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSBH-----HHHTTCCEECCHHHHHHHHHHHHHHH
T ss_pred cEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--CccC-----hHHhCCeEeecCcHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999886 3322 46899999999876 44 578999
Q ss_pred cccCC----------CeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccC
Q 015291 309 PQLKG----------KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG 356 (409)
Q Consensus 309 PeL~g----------kl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~ 356 (409)
++|+| +++++|+|||+++||+++++++++++ ++.|||+++|+++.+.
T Consensus 219 ~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~-~t~eei~~~l~~~~~~ 275 (359)
T 4dpl_A 219 SEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEE-TAAEKVKETLENFRGE 275 (359)
T ss_dssp TTSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSC-CCHHHHHHHHHTCCCH
T ss_pred hhcccccccccccCCceEEEEEEecccccEEEEEEEEECCC-CCHHHHHHHHHHhhcc
Confidence 98876 79999999999999999999999999 9999999999998754
No 38
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=6.5e-38 Score=314.16 Aligned_cols=235 Identities=20% Similarity=0.308 Sum_probs=186.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
+||||+| +|.+|+.++|+|.+|++|.++++.+... + + .|+.+.+.|+.+.+.. -
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------~---------~--aG~~~~~~~~~~~~~~-~ 56 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------R---------S--QGRKLAFRGQEIEVED-A 56 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------T---------T--SSCEEEETTEEEEEEE-T
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------c---------c--CCCceeecCCceEEEe-C
Confidence 7999999 9999999999999987666776655321 1 1 4667778888777633 2
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEecCCc-cccCcCCCcEEecCCcc
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNE-KDYDHEVANIVSNASCT 241 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps---~~~dvP~vV~gVN~-~~~~~~~~~IISnaSCT 241 (409)
+++ .|. ++|+||+|+|.+.+++.++.|+++|+ +||+.++ +++++|++|||||+ +.++...++|||||||+
T Consensus 57 ~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~ 130 (344)
T 3tz6_A 57 ETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCT 130 (344)
T ss_dssp TTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHH
T ss_pred CHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcH
Confidence 333 454 89999999999999999999999999 4555443 56688999999999 88875325899999999
Q ss_pred hhhhHHHHHHHHhhcCccEEEeeeeeccccccc-cccccchh-----------------------hhhhhccccceecCC
Q 015291 242 TNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASHRD-----------------------LRRARAAALNIVPTS 297 (409)
Q Consensus 242 Tn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~-llD~~~~d-----------------------~r~~Raaa~NIIP~~ 297 (409)
|+|++|+|+||+++|||+++.|||+|+|||..+ .++..+.. ..++...++|++|++
T Consensus 131 tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i 210 (344)
T 3tz6_A 131 TMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLA 210 (344)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999844 23222211 134667999999974
Q ss_pred -----Cch--HHHH-------HHHccccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHc
Q 015291 298 -----TGA--AKAV-------SLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKA 353 (409)
Q Consensus 298 -----tGa--akav-------~kVlPeL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~a 353 (409)
+|. ++|+ +|++..-..+++++|+|||+++||++.++++++++ ++.|||+++|+++
T Consensus 211 ~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~-~s~eei~~~l~~~ 279 (344)
T 3tz6_A 211 GSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQP-LSPERARELLDGA 279 (344)
T ss_dssp SCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSC-CCHHHHHHHHHHC
T ss_pred cccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCC-CCHHHHHHHHhcC
Confidence 344 4543 35553222479999999999999999999999999 9999999999964
No 39
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=9.6e-39 Score=323.65 Aligned_cols=238 Identities=13% Similarity=0.119 Sum_probs=184.4
Q ss_pred eeeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEE-ECCeEEEEE
Q 015291 86 KLKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETIS-VDGKLIKVV 162 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr-~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~-v~gk~I~v~ 162 (409)
++||||+| +|.+|+.++| +|++|+++.++++.+... . .|+.+. +.|+.+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~------------------------aG~~~~~~~~~~~~v~ 58 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-N------------------------AGGKAPSFAKNETTLK 58 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-C------------------------TTSBCCTTCCSCCBCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-h------------------------cCCCHHHcCCCceEEE
Confidence 47999999 9999999999 999987656776655421 0 111111 333333332
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEecCCccccCcC-CC--cEEe
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE-VA--NIVS 236 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps---~~~dvP~vV~gVN~~~~~~~-~~--~IIS 236 (409)
...+++. |. ++|+||+|+|.+.+++.++.|+++|+|++||++++ +++++|++|||||++.++.. .+ ++||
T Consensus 59 ~~~~~~~--~~--~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 134 (377)
T 3uw3_A 59 DATSIDD--LK--KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI 134 (377)
T ss_dssp ETTCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCChhH--hc--CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEE
Confidence 2222222 43 89999999999999999999999999889999886 56678999999999998642 12 3599
Q ss_pred cCCcchhhhHHHHHHHHhhcCccEEEeeeeeccccccc-cccccc-----------------------------------
Q 015291 237 NASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASH----------------------------------- 280 (409)
Q Consensus 237 naSCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~-llD~~~----------------------------------- 280 (409)
||||+|||++|+|+||+++|||+++.|||+|++||+.+ .++..+
T Consensus 135 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~~ 214 (377)
T 3uw3_A 135 GGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNGD 214 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHST
T ss_pred cCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999843 211111
Q ss_pred --hhhhhhhccccceecCC-----CchHHH-------HHHHcccc------CCCeeEEEEecCccceeEEEEEEEEccCC
Q 015291 281 --RDLRRARAAALNIVPTS-----TGAAKA-------VSLVMPQL------KGKLNGIALRVPTPNVSVVDLVVNVEKKG 340 (409)
Q Consensus 281 --~d~r~~Raaa~NIIP~~-----tGaaka-------v~kVlPeL------~gkl~g~avRVPv~~gs~vdltv~lek~~ 340 (409)
..-.+++++++|++|+. +|++++ ++|++..+ ..+++++|+|||+++||+..++++++++
T Consensus 215 ~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~- 293 (377)
T 3uw3_A 215 AMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKD- 293 (377)
T ss_dssp TSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSC-
T ss_pred ccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCC-
Confidence 01134677999999996 355555 45566553 4579999999999999999999999999
Q ss_pred CCHHHHHHHHHHc
Q 015291 341 ITAEDVNAAFRKA 353 (409)
Q Consensus 341 vs~eeI~~al~~a 353 (409)
++.||++++|+++
T Consensus 294 ~~~eei~~~l~~~ 306 (377)
T 3uw3_A 294 VPLDEINGILASA 306 (377)
T ss_dssp CCHHHHHHHHHTS
T ss_pred CCHHHHHHHHHhC
Confidence 9999999999987
No 40
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=1.5e-38 Score=321.48 Aligned_cols=237 Identities=15% Similarity=0.120 Sum_probs=183.3
Q ss_pred eeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeE-EECCeEEEEEe
Q 015291 87 LKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETI-SVDGKLIKVVS 163 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr-~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l-~v~gk~I~v~~ 163 (409)
|||||+| +|.+|+.++| +|++|+++.++++.+... + -| +.+ .+.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------~-aG-----------~~~~~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS-------------Q-IG-----------VPAPNFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------S-TT-----------SBCCCSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc-------------c-cC-----------cCHHHhCCCceEEEe
Confidence 5899999 9999999999 999987656776655431 1 11 111 13333333422
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEecCCccccCcC-CC--cEEec
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE-VA--NIVSN 237 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps---~~~dvP~vV~gVN~~~~~~~-~~--~IISn 237 (409)
..+++. |. ++|+||+|+|.+.++++++.|+++|+|++||++++ +++++|++|||||++.++.. .+ ++|||
T Consensus 56 ~~~~~~--~~--~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--LK--QLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--HT--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--hc--cCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 222222 43 89999999999999999999999999889999886 56678999999999998642 12 46999
Q ss_pred CCcchhhhHHHHHHHHhhcCccEEEeeeeeccccccc-cccccc------------------------------------
Q 015291 238 ASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASH------------------------------------ 280 (409)
Q Consensus 238 aSCTTn~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~-llD~~~------------------------------------ 280 (409)
|||+|||++|+|+||+++|||+++.|||||++||+.+ .++..+
T Consensus 132 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~~ 211 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSGS 211 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSTT
T ss_pred CChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999843 211111
Q ss_pred -hhhhhhhccccceecCCC-----chHHHH-------HHHccc--cCCCeeEEEEecCccceeEEEEEEEEccCCCCHHH
Q 015291 281 -RDLRRARAAALNIVPTST-----GAAKAV-------SLVMPQ--LKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAED 345 (409)
Q Consensus 281 -~d~r~~Raaa~NIIP~~t-----Gaakav-------~kVlPe--L~gkl~g~avRVPv~~gs~vdltv~lek~~vs~ee 345 (409)
..-.+++++++|++|+.. |+++++ +|++.. -..+++++|+|||+++||+..++++++++ ++.+|
T Consensus 212 ~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~-~~~~e 290 (370)
T 3pzr_A 212 FPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQN-IPLDE 290 (370)
T ss_dssp SCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSC-CCHHH
T ss_pred cccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCC-CCHHH
Confidence 011345779999999963 555554 456653 23479999999999999999999999999 99999
Q ss_pred HHHHHHHc
Q 015291 346 VNAAFRKA 353 (409)
Q Consensus 346 I~~al~~a 353 (409)
++++|+++
T Consensus 291 i~~~l~~~ 298 (370)
T 3pzr_A 291 IEEMIATH 298 (370)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHhC
Confidence 99999987
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=5.2e-36 Score=304.06 Aligned_cols=244 Identities=21% Similarity=0.261 Sum_probs=182.4
Q ss_pred cceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC---CCChhhhhhhhcccccccccCceEEEecCCeEEECCeEE
Q 015291 84 VAKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND---SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (409)
Q Consensus 84 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd---~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I 159 (409)
++++||||+| +|.+|+.++|+|.++ |.++|+.+-. ..+..+ ... | +|.. +..|..+++.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~h--p~~el~~l~aS~~saGk~~-~~~------~-~~~~------~~~~p~~~~~~ 80 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKH--PEFEIHALGASSRSAGKKY-KDA------A-SWKQ------TETLPETEQDI 80 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTTTSBH-HHH------C-CCCC------SSCCCHHHHTC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcC--CCceEEEeeccccccCCCH-HHh------c-cccc------ccccccccccc
Confidence 4468999999 999999999999987 5689877732 122211 111 0 0100 00000001112
Q ss_pred EEEecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEecCCccccC----------
Q 015291 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYD---------- 228 (409)
Q Consensus 160 ~v~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap-s~~~dvP~vV~gVN~~~~~---------- 228 (409)
.+ ++-++++ .|. ++|+||+|+|.+.+++.++.++++|++.|.+|++ ++++|+|++|++||++.|+
T Consensus 81 ~v-~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~ 156 (381)
T 3hsk_A 81 VV-QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAV 156 (381)
T ss_dssp BC-EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHH
T ss_pred eE-EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhc
Confidence 23 1122321 354 8999999999999999999999999965555555 4677889999999999885
Q ss_pred ----cCCCcEEecCCcchhhhHHHHHHHHhhcC-ccEEEeeeeecccccccc-ccccchhhhhhhccccceecCCCch-H
Q 015291 229 ----HEVANIVSNASCTTNCLAPFVKVMDEELG-IVKGAMTTTHSYTGDQRL-LDASHRDLRRARAAALNIVPTSTGA-A 301 (409)
Q Consensus 229 ----~~~~~IISnaSCTTn~Lapvlk~L~~~fG-I~~~~mTTiha~Tg~Q~l-lD~~~~d~r~~Raaa~NIIP~~tGa-a 301 (409)
-.+.+||+||+|+|+|++++|+||+++|| |+++.|+|+|+|||+++- ... .+.+++|++|+.+|. .
T Consensus 157 ~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~~~-------~~~~~~N~~Py~~~~e~ 229 (381)
T 3hsk_A 157 SKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPGVS-------GMDILDNIVPYISGEED 229 (381)
T ss_dssp HTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC------CC-------HHHHTTCCBCCCTTHHH
T ss_pred ccccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCCcc-------hhhhhcChhhcccchHH
Confidence 12257999999999999999999999999 999999999999999872 211 246899999999886 3
Q ss_pred ---HHHHHHccccCC-------------CeeEEEEecCccceeEEEEEEEEcc--CCCCHHHHHHHHHHccc
Q 015291 302 ---KAVSLVMPQLKG-------------KLNGIALRVPTPNVSVVDLVVNVEK--KGITAEDVNAAFRKAAE 355 (409)
Q Consensus 302 ---kav~kVlPeL~g-------------kl~g~avRVPv~~gs~vdltv~lek--~~vs~eeI~~al~~aa~ 355 (409)
.|+.|+|+.++| +++++|+|||+++||++++++++++ + ++.|||+++|+++..
T Consensus 230 k~~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~-~t~eei~~~l~~~y~ 300 (381)
T 3hsk_A 230 KLEWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPA-PSVEDVKQCLREYEC 300 (381)
T ss_dssp HHHHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSC-CCHHHHHHHHHHCBC
T ss_pred HHHHHHHHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCC-CCHHHHHHHHHHhhc
Confidence 356788887766 8999999999999999999999999 8 999999999999864
No 42
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=1.3e-35 Score=296.65 Aligned_cols=277 Identities=15% Similarity=0.139 Sum_probs=194.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
+||+|.| +|.+|+.++|+|.++ ++++++++-...+.+..-.. +...|..|.+. ..+.+....
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~--p~~el~~l~s~~~~~saGk~--~~~~~p~~~~~-------------~~~~v~~~~ 67 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRH--PHMNITALTVSAQSNDAGKL--ISDLHPQLKGI-------------VELPLQPMS 67 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC--TTEEEEEEEEETTCTTTTSB--HHHHCGGGTTT-------------CCCBEEEES
T ss_pred eEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEecCchhhcCCc--hHHhCccccCc-------------cceeEeccC
Confidence 7999999 999999999999986 56898887532100000000 01111112210 012221100
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC-C-CCCCC---------------e---EEecCCcc
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-K-GADIP---------------T---YVVGVNEK 225 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps-~-~~dvP---------------~---vV~gVN~~ 225 (409)
++++ |. .++|+||+|+|.+.+++.++.|+++|++.|.+|++. + ++++| + .|||+|.+
T Consensus 68 ~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~ 144 (337)
T 3dr3_A 68 DISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGN 144 (337)
T ss_dssp SGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCH
T ss_pred CHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHH
Confidence 2333 31 279999999999999999999999999766667663 3 33332 2 35556999
Q ss_pred ccCcCCCcEEecCCcchhhhHHHHHHHHh--hcCccEE-Eeeeeecccccc-ccccccchhhhhhhccccceecCCCchH
Q 015291 226 DYDHEVANIVSNASCTTNCLAPFVKVMDE--ELGIVKG-AMTTTHSYTGDQ-RLLDASHRDLRRARAAALNIVPTSTGAA 301 (409)
Q Consensus 226 ~~~~~~~~IISnaSCTTn~Lapvlk~L~~--~fGI~~~-~mTTiha~Tg~Q-~llD~~~~d~r~~Raaa~NIIP~~tGaa 301 (409)
.++. .+|||||||+|+|++++|+||++ .||++++ .|+|+|+|||++ +++|..|.+.| |++|+.++.
T Consensus 145 ~i~~--~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~~~~~-------n~~py~~~~- 214 (337)
T 3dr3_A 145 KLKE--ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEV-------SLQPYGVFT- 214 (337)
T ss_dssp HHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTSGGGC-------SEEECSTTT-
T ss_pred HhCC--CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccccccc-------ceEccCccc-
Confidence 9864 68999999999999999999999 6999999 999999999995 57776766544 999998875
Q ss_pred HHHHHHccccCC----CeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcccC-CCCccccccCCCeEEecCCC
Q 015291 302 KAVSLVMPQLKG----KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG-PLKGILAVCDVPLVSVDFRC 376 (409)
Q Consensus 302 kav~kVlPeL~g----kl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa~~-~lkgil~~~e~p~VS~Df~~ 376 (409)
.+.+||+++ +++++++|||+++||+++++++++++ ++.|||+++|+++-++ ++--++.-.+ |-. .+..|
T Consensus 215 ---h~h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~-~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~-~~v~g 288 (337)
T 3dr3_A 215 ---HRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSG-VTQAQVAQALQQAYAHKPLVRLYDKGV-PAL-KNVVG 288 (337)
T ss_dssp ---CTHHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTT-CCHHHHHHHHHHHHTTCTTEEECSSSC-CCG-GGTTT
T ss_pred ---ceechhHHhhhcCCEEEEEEEecccccEEEEEEEEECCC-CCHHHHHHHHHHHhCCCCCEEECCCCC-CCH-HHhCC
Confidence 456777765 89999999999999999999999999 9999999999986332 3332322111 321 24455
Q ss_pred CCcceeecCCCceeeCCCeEEEEEEeCC
Q 015291 377 SDVSSTIDSSLTMVMGDDMVKVVAWYDN 404 (409)
Q Consensus 377 ~~~S~i~d~~~t~~~~~~~vKl~~WyDN 404 (409)
..+-.|- ...+++.+.+++..||
T Consensus 289 tn~~~ig-----~~~~~~~l~~~~~~DN 311 (337)
T 3dr3_A 289 LPFCDIG-----FAVQGEHLIIVATEDN 311 (337)
T ss_dssp SSCEEEE-----EEEETTEEEEEEEECT
T ss_pred CCcEEEE-----EEEeCCEEEEEEEech
Confidence 5443321 1112467788888899
No 43
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=1.2e-33 Score=284.05 Aligned_cols=239 Identities=13% Similarity=0.035 Sum_probs=187.0
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCC-CC--CceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRK-DS--PLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~-~~--~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
++||+|+| +|+||+.++|.|.+++ ++ .++|++++...+... ++++.|++|.+.. .+ .+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk-----~~~~~~~~l~~~~------~~-------~~ 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS-----TLGEHHPHLTPLA------HR-------VV 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS-----BGGGTCTTCGGGT------TC-------BC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC-----chhhhcccccccc------ee-------ee
Confidence 47999999 9999999999999874 22 699999985322111 2456676665310 11 11
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCC-C-------------CCeEEecC--Cc
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGA-D-------------IPTYVVGV--NE 224 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps-~~~-d-------------vP~vV~gV--N~ 224 (409)
. +.+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++. +++ + .|..|||+ |.
T Consensus 71 ~-~~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~ 144 (352)
T 2nqt_A 71 E-PTEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGAR 144 (352)
T ss_dssp E-ECCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHH
T ss_pred c-cCCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCH
Confidence 1 11222 265 899999999999999999999 9998666667764 343 3 28888999 99
Q ss_pred cccCcCCCcEEecCCcchhhhHHHHHHHHhhcCcc-EEEeeeeeccccc-cccccccchhhhhhhccccceec-CCC-c-
Q 015291 225 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV-KGAMTTTHSYTGD-QRLLDASHRDLRRARAAALNIVP-TST-G- 299 (409)
Q Consensus 225 ~~~~~~~~~IISnaSCTTn~Lapvlk~L~~~fGI~-~~~mTTiha~Tg~-Q~llD~~~~d~r~~Raaa~NIIP-~~t-G- 299 (409)
+.++. .+|||||+|+|+|+++.|+||+++++|+ ++.|+|+|++||+ |+.+|..|.+.++.+..++|++| +.. .
T Consensus 145 ~~i~~--~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~~~~~~~~~~ay~~~~~h~h~pE 222 (352)
T 2nqt_A 145 DQLRG--TRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPE 222 (352)
T ss_dssp HHHTT--CSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGSHHHHTTCCEECSTTTTSTTHHH
T ss_pred HHHhc--CCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCccccccccHHHHhhhcccccCCCcceecHH
Confidence 99974 6899999999999999999999999999 9999999999999 88888888888888888999998 321 1
Q ss_pred hHHHHHHHccccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcc
Q 015291 300 AAKAVSLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAA 354 (409)
Q Consensus 300 aakav~kVlPeL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa 354 (409)
-..+++|++. .+++++++|+|||+++||+++++++++++ .|||+++|+++-
T Consensus 223 i~~e~~ki~~-~~~~v~ft~~rvP~~rG~~~ti~~~l~~~---~~ei~~~~~~~y 273 (352)
T 2nqt_A 223 IAQGLRAVTD-RDVSVSFTPVLIPASRGILATCTARTRSP---LSQLRAAYEKAY 273 (352)
T ss_dssp HHHHHHTTCS-SCCEEEEEEEECSCSSCEEEEEEEECCSC---HHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCEEEEEEEEccccEEEEEEEEEECCC---HHHHHHHHHHhh
Confidence 1234456665 36789999999999999999999999874 899999999864
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.95 E-value=2.7e-28 Score=245.05 Aligned_cols=228 Identities=12% Similarity=0.100 Sum_probs=171.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+| +|.+|+.++|+|.++ |.++|+.+......- -+|+..|..|. +.+.+ .+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h--P~~el~~l~S~~~aG-----~~~~~~~p~~~---------------~~l~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH--PEAKITYLSSRTYAG-----KKLEEIFPSTL---------------ENSIL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC--TTEEEEEEECSTTTT-----SBHHHHCGGGC---------------CCCBC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEeCccccc-----CChHHhChhhc---------------cCceE-Ee
Confidence 58999999 999999999999988 569999987531110 12334444443 11222 11
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCC-CC-----------------CeEEecCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGA-DI-----------------PTYVVGVN 223 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps---~~~-dv-----------------P~vV~gVN 223 (409)
.+++++ |. ++|+||+|+|...+++.++.+ +|+ +||+.++ +++ ++ |..+||+|
T Consensus 70 ~~~~~~-~~--~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n 142 (351)
T 1vkn_A 70 FDPEKV-SK--NCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELH 142 (351)
T ss_dssp CCHHHH-HH--HCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHH
T ss_pred CCHHHh-hc--CCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccC
Confidence 223222 33 799999999999999999887 777 6887764 442 32 77788889
Q ss_pred ccccCcCCCcEEecCCcchhhhHHHHHHHHhhcCcc--EEEeeeeeccccccc-cccccchhhhhhhccccceecCCCch
Q 015291 224 EKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGA 300 (409)
Q Consensus 224 ~~~~~~~~~~IISnaSCTTn~Lapvlk~L~~~fGI~--~~~mTTiha~Tg~Q~-llD~~~~d~r~~Raaa~NIIP~~tGa 300 (409)
.+.++. .+||+||+|+|+|+++.|+||+++++|+ ++.++|+|++||+++ ..+..+.. .+..|+.|...+.
T Consensus 143 ~e~i~~--a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~~~-----e~~~n~~~y~~~~ 215 (351)
T 1vkn_A 143 REEIKN--AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYLFS-----EVNESLRPYNVAK 215 (351)
T ss_dssp HHHHTT--CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGBHH-----HHTTCCEECSCSC
T ss_pred HHHhcc--CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccchh-----HHhcccccCCccc
Confidence 999875 5899999999999999999999999999 999999999999977 44554422 2346777765442
Q ss_pred H-------HHHHHHccccCCCeeEEEEecCccceeEEEEEEEEccCCCCHHHHHHHHHHcc
Q 015291 301 A-------KAVSLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAA 354 (409)
Q Consensus 301 a-------kav~kVlPeL~gkl~g~avRVPv~~gs~vdltv~lek~~vs~eeI~~al~~aa 354 (409)
. +++++++.+ ..+++.+|+|||+++||++.++++++ ++.+|++++|+++-
T Consensus 216 h~h~pEi~~el~~i~~~-~~~v~ftp~rvPv~rG~~~tv~v~l~---~~~eei~~~l~~~Y 272 (351)
T 1vkn_A 216 HRHVPEMEQELGKISGK-KVNVVFTPHLVPMTRGILSTIYVKTD---KSLEEIHEAYLEFY 272 (351)
T ss_dssp CTHHHHHHHHHHHHHTS-CCEEEEEEEEESSSSCEEEEEEEECS---SCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhhCC-CCCEEEEEEEeccccEEEEEEEEEEc---CCHHHHHHHHHHhh
Confidence 2 344555542 34799999999999999999999997 58999999999754
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.60 E-value=2.3e-08 Score=98.54 Aligned_cols=222 Identities=20% Similarity=0.184 Sum_probs=128.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhh-hhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~-~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+.+++.|.++ .+.+++++|-|.. ++. ...+.+ .+|. ... .++ +
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~-~~~~elvav~d~~-~~~~~~~~a~---~~g~---~~~--------~~~----~--- 60 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRN-AKYLEMGAMVGID-AASDGLARAQ---RMGV---TTT--------YAG----V--- 60 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-CSSEEEEEEECSC-TTCHHHHHHH---HTTC---CEE--------SSH----H---
T ss_pred CCEEEEEcCcHHHHHHHHHHHhh-CcCeEEEEEEeCC-hhhhHHHHHH---HcCC---Ccc--------cCC----H---
Confidence 58999999999999999999762 2569999998862 221 101110 1110 000 000 0
Q ss_pred CCC-CCCCccccCccEEEeCCCCCCChhhHHHHHHc--CCCEEEEe-CCCCCCCCCeEEecCCccccCc-CCCcEEecCC
Q 015291 165 RDP-LQLPWAELGIDIVIEGTGVFVDGPGAGKHIQA--GAKKVIIT-APAKGADIPTYVVGVNEKDYDH-EVANIVSNAS 239 (409)
Q Consensus 165 ~~p-~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~a--GakkVVIS-aps~~~dvP~vV~gVN~~~~~~-~~~~IISnaS 239 (409)
++. ++.+|. ++|+||+|||.....+.+...+++ |. .||+ .|.. -.|..++++|.+.+.. ...++++++.
T Consensus 61 e~ll~~~~~~--~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~--~g~~~~p~v~~~~~~~~~~~~lva~~g 134 (312)
T 1nvm_B 61 EGLIKLPEFA--DIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAA--IGPYCVPVVNLEEHLGKLNVNMVTCGG 134 (312)
T ss_dssp HHHHHSGGGG--GEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTC--SSCBCCHHHHTTTTTTCSEEECCCHHH
T ss_pred HHHHhccCCC--CCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCccc--ccccccCccCHHHHHhccCCcEEEeCC
Confidence 000 111232 799999999988888999999998 87 4554 3321 1367777888877532 1136787777
Q ss_pred cchhhhHHHHHHHHhhcCccEE-Eeeeeecccccc--c-cccccc-------------------------hhhhhhhccc
Q 015291 240 CTTNCLAPFVKVMDEELGIVKG-AMTTTHSYTGDQ--R-LLDASH-------------------------RDLRRARAAA 290 (409)
Q Consensus 240 CTTn~Lapvlk~L~~~fGI~~~-~mTTiha~Tg~Q--~-llD~~~-------------------------~d~r~~Raaa 290 (409)
|. ..|++..+.+.|...-. .+.++++.+... + -+|... ...-.-|+.+
T Consensus 135 ~~---~ipl~~a~~~~~~~~~~~iv~~i~sgs~G~~~~~~l~e~~~~~~~ai~~~gg~~~~k~il~~~p~~~p~~~~~tv 211 (312)
T 1nvm_B 135 QA---TIPMVAAVSRVAKVHYAEIVASISSKSAGPGTRANIDEFTETTSKAIEVIGGAAKGKAIIIMNPAEPPLIMRDTV 211 (312)
T ss_dssp HH---HHHHHHHHHTTSCEEEEEEEEEEEGGGSCHHHHTCHHHHHHHHHHHHHHTTCCSSEEEEEEEECCSSCCCEEEEE
T ss_pred cc---cchHHHHhhhhccchhHhHhhhhhccccCCCcccchhhHHHHHHHHHHHhhhccCCCcEEEEecCCCCcccceeE
Confidence 74 46777777777765433 567777666311 1 012111 0001125677
Q ss_pred cceecCCC--chHHH-------HHHHccccCCCeeEE--------EEecCcc---ceeEEEEEEEEccC
Q 015291 291 LNIVPTST--GAAKA-------VSLVMPQLKGKLNGI--------ALRVPTP---NVSVVDLVVNVEKK 339 (409)
Q Consensus 291 ~NIIP~~t--Gaaka-------v~kVlPeL~gkl~g~--------avRVPv~---~gs~vdltv~lek~ 339 (409)
+|.+|..+ +..++ +++++|..+.+..-. .+++|-+ .+.-+.+.++++-.
T Consensus 212 ~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (312)
T 1nvm_B 212 YVLSAAADQAAVAASVAEMVQAVQAYVPGYRLKQQVQFDVIPESAPLNIPGLGRFSGLKTSVFLEVEGA 280 (312)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHHHTTCTTEEESSCCEEEEECTTSCEEETTTEEECEEEEEEEEEECCC
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHHHcCCCCcCCCceEEeccCCCcccccCccccCCCEEEEEEEEecC
Confidence 88887322 33344 445555443232211 2456655 37888899988865
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.63 E-value=5.7e-05 Score=74.01 Aligned_cols=89 Identities=19% Similarity=0.229 Sum_probs=62.2
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+++||||+|+|++|+.+++.|.+. ++++++++-|....+.+ . -| +.++
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~--~~~elvav~d~~~~~~~---------------------~-----~g--v~~~-- 49 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQ--PDMDLVGIFSRRATLDT---------------------K-----TP--VFDV-- 49 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEEESSSCCSS---------------------S-----SC--EEEG--
T ss_pred CCCEEEEEeecHHHHHHHHHHhcC--CCCEEEEEEcCCHHHhh---------------------c-----CC--Ccee--
Confidence 368999999999999999998765 45999999875211100 0 01 1221
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++- .++|+|++||+.....+.+...+++|. .||++.|
T Consensus 50 ~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp 90 (320)
T 1f06_A 50 ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYD 90 (320)
T ss_dssp GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCC
T ss_pred CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCC
Confidence 2333332 278999999999888888889999886 4666655
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.41 E-value=0.00013 Score=70.92 Aligned_cols=86 Identities=20% Similarity=0.215 Sum_probs=58.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||+|+|+||+.+++.+... ++++|++|-|. +++.+.. +| -.+..+ .
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~--~~~elvav~d~-~~~~~~~-------~g------------------~~~~~~--~ 58 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREA--PDFEIAGIVRR-NPAEVPF-------EL------------------QPFRVV--S 58 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECC---------------CC------------------TTSCEE--S
T ss_pred CCEEEEECChHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHH-------cC------------------CCcCCH--H
Confidence 58999999999999999999875 45999998875 2221100 11 000011 2
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
+..++ .++|+|+.||+.....+.+...+++|. .||.
T Consensus 59 ~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ 94 (304)
T 3bio_A 59 DIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTAD 94 (304)
T ss_dssp SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEE
T ss_pred HHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEE
Confidence 22222 279999999999988899999999886 3444
No 48
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.39 E-value=0.00021 Score=69.55 Aligned_cols=98 Identities=19% Similarity=0.192 Sum_probs=64.3
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||+|+|.||+.+++.+...+..+++|++|-|. +.+....+.+ .+|. . .++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~~a~~~a~---~~~~---~----------------~~~-- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLSRAKEFAQ---KHDI---P----------------KAY-- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHHHHHHHHH---HHTC---S----------------CEE--
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHHHHHHHHH---HcCC---C----------------ccc--
Confidence 6799999999999999999987654335899999886 3333222111 1110 0 000
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 56 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 56 GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 111111 11236899999999999999999999999 46777555
No 49
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.31 E-value=0.0003 Score=68.74 Aligned_cols=96 Identities=20% Similarity=0.266 Sum_probs=63.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||+|+|.||+..++.|... +.++|++|-|. +.+.+..+.+ .+|. . .++
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~~---~----------------~~~-- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMI--DDAILYAISDV-REDRLREMKE---KLGV---E----------------KAY-- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGS--TTEEEEEEECS-CHHHHHHHHH---HHTC---S----------------EEE--
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HhCC---C----------------cee--
Confidence 678999999999999999998764 45999999886 3333222211 1110 0 011
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 96 (344)
T 3ezy_A 54 KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKP 96 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECC
Confidence 112211 11227899999999988888999999999 45777555
No 50
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.31 E-value=0.0003 Score=68.35 Aligned_cols=94 Identities=23% Similarity=0.285 Sum_probs=63.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||+|+|.||+..++.|... +.++|++|-|. +.+.+..+.+ .+| .. +
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~---~~----------~---------- 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGN--ADARLVAVADA-FPAAAEAIAG---AYG---CE----------V---------- 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---HTT---CE----------E----------
T ss_pred CceEEEEECCCHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHHHHHH---HhC---CC----------c----------
Confidence 678999999999999999998875 45999999886 3333222211 011 00 1
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 111111 11226899999999998889999999998 45776544
No 51
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.24 E-value=0.00051 Score=67.44 Aligned_cols=96 Identities=24% Similarity=0.285 Sum_probs=62.4
Q ss_pred ceeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 85 m~ikVaInGfGrIGr-~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
|++||||+|+|.||+ ..++++... +.++|++|-|....+.++. +| |.. | +.++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~~~~a~--~~----~~~---------------~--~~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIR--ETLEVKTIFDLHVNEKAAA--PF----KEK---------------G--VNFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECTTCCHHHHH--HH----HTT---------------T--CEEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhC--CCeEEEEEECCCHHHHHHH--hh----CCC---------------C--CeEE-
Confidence 679999999999999 577777654 5699999998631111111 11 100 0 0111
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 -ADLNEL-LTDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp -SCTHHH-HSCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 223322 12236999999999998889999999999 45666433
No 52
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.20 E-value=0.00058 Score=66.75 Aligned_cols=98 Identities=21% Similarity=0.269 Sum_probs=64.2
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||+|+|.||+..++.+.++. +.++|++|-|. +.+.+..+.+ .+|. . ..++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~-~~~~l~av~d~-~~~~~~~~~~---~~g~---~---------------~~~~-- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKL-SGAEIVAVTDV-NQEAAQKVVE---QYQL---N---------------ATVY-- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTC-SSEEEEEEECS-SHHHHHHHHH---HTTC---C---------------CEEE--
T ss_pred CeEEEEEECccHHHHHHHHHHHhhC-CCcEEEEEEcC-CHHHHHHHHH---HhCC---C---------------Ceee--
Confidence 6789999999999999999988331 45999999886 3332221111 1110 0 0111
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP 98 (344)
T 3mz0_A 56 PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKP 98 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 122221 11126899999999999999999999999 46777544
No 53
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.09 E-value=0.00084 Score=66.67 Aligned_cols=88 Identities=24% Similarity=0.268 Sum_probs=58.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCC------CCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKD------SPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~------~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I 159 (409)
++||||.|+|.||+.+++.+.+++. .+++|++|-|. +.+.. .+ ++ . .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~-~~~~~---------~~-~~------~-~--------- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR-DPRKP---------RA-IP------Q-E--------- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS-CTTSC---------CS-SC------G-G---------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC-CHHHh---------hc-cC------c-c---------
Confidence 5899999999999999999987531 04899999875 11100 00 00 0 0
Q ss_pred EEEecCCCCCCCccccCccEEEeCCCCC-CChhhHHHHHHcCCCEEEEeC
Q 015291 160 KVVSNRDPLQLPWAELGIDIVIEGTGVF-VDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 160 ~v~~~~~p~~l~W~~~gvDiVle~TG~f-~s~e~a~~hl~aGakkVVISa 208 (409)
.++ .+++++- ++|+|++|||.. ...+.+.+.+++|. -|+++
T Consensus 56 ~~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVta 97 (332)
T 2ejw_A 56 LLR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLITA 97 (332)
T ss_dssp GEE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEEC
T ss_pred ccc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEEC
Confidence 011 3455543 689999999976 34567888999987 34543
No 54
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.05 E-value=0.0012 Score=64.39 Aligned_cols=94 Identities=23% Similarity=0.353 Sum_probs=63.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||+|+|.||+.+++.|... ++++|++|-|. +.+.+..+.+ .+| + .++ .
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~g-----~---------------~~~--~ 55 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAAN--PDLELVVIADP-FIEGAQRLAE---ANG-----A---------------EAV--A 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---TTT-----C---------------EEE--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HcC-----C---------------cee--C
Confidence 48999999999999999999875 45999999886 3332221111 011 0 111 1
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 97 (344)
T 3euw_A 56 SPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERGI-PALCEKP 97 (344)
T ss_dssp SHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEECC
Confidence 22221 112378999999999988899999999994 4777555
No 55
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.05 E-value=0.00085 Score=65.43 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=62.4
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+|||||+|+|.||+. +++++... ++++|+||-|+ +.+....+-+ .+| .. +++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~--~~~~lvav~d~-~~~~a~~~a~---~~g---~~----------------~~y-- 75 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDA--ENCVVTAIASR-DLTRAREMAD---RFS---VP----------------HAF-- 75 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC--SSEEEEEEECS-SHHHHHHHHH---HHT---CS----------------EEE--
T ss_pred ccEEEEEcChHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcC---CC----------------eee--
Confidence 489999999999986 57888765 45999999987 4433322211 111 00 011
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+=||....-.+.+...+++|. -|++-=|
T Consensus 76 ~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 118 (350)
T 4had_A 76 GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKP 118 (350)
T ss_dssp SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCC
Confidence 111221 112378999999999999999999999985 5666434
No 56
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.05 E-value=0.00078 Score=65.92 Aligned_cols=95 Identities=18% Similarity=0.241 Sum_probs=59.8
Q ss_pred ceeeEEEEcCChhHHH-HHH-HHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 85 AKLKVAINGFGRIGRN-FLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 85 m~ikVaInGfGrIGr~-vlr-~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
|++||||+|+|.||+. .++ ++... +.++|++|-|.. .+.. ..++ ++. | +.++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~--~~~~l~av~d~~-~~~~-~~~~------~~~--------------~--~~~~ 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRK--DSWHVAHIFRRH-AKPE-EQAP------IYS--------------H--IHFT 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCT--TTEEEEEEECSS-CCGG-GGSG------GGT--------------T--CEEE
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcC--CCeEEEEEEcCC-HhHH-HHHH------hcC--------------C--CceE
Confidence 6799999999999996 566 43332 569999999862 2111 1110 010 1 0111
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (345)
T 3f4l_A 55 --SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKP 97 (345)
T ss_dssp --SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred --CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCC
Confidence 223322 12236999999999998889999999999 45666444
No 57
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.99 E-value=0.0016 Score=64.36 Aligned_cols=36 Identities=31% Similarity=0.503 Sum_probs=30.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC----CCCCceEEEEeCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR----KDSPLDVVVVNDS 121 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~----~~~~~~vVaInd~ 121 (409)
++||||.|+|.||+.+++.|.++ ..++++|++|-|+
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 68999999999999999999863 1146999999886
No 58
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.98 E-value=0.00068 Score=65.52 Aligned_cols=146 Identities=17% Similarity=0.146 Sum_probs=80.7
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+|||+|+| +|++||.+++++.+. ++++||++-|..+.+.. |+-.+++ .+ +. ..+.+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~--~~~eLv~~~d~~~~~~~----------G~d~gel---~g----~~-~gv~v~-- 64 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA--PDATLVGALDRTGSPQL----------GQDAGAF---LG----KQ-TGVALT-- 64 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC--TTEEEEEEBCCTTCTTT----------TSBTTTT---TT----CC-CSCBCB--
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEEecCcccc----------cccHHHH---hC----CC-CCceec--
Confidence 48999999 999999999999876 46999998765221110 1100010 00 00 011221
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccc---cCc--CCCcEEe--c
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKD---YDH--EVANIVS--N 237 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~---~~~--~~~~IIS--n 237 (409)
.+++++- .++|+|||+|......+.+...+++|.+ +||..... +.+. +.. .+..++= |
T Consensus 65 ~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVigTTG~-----------s~~~~~~L~~aa~~~~vv~a~N 129 (272)
T 4f3y_A 65 DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVIGTTGF-----------SEPQKAQLRAAGEKIALVFSAN 129 (272)
T ss_dssp CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCCC-----------CHHHHHHHHHHTTTSEEEECSC
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCCC-----------CHHHHHHHHHHhccCCEEEECC
Confidence 2222211 1579999999777677788888899984 55533221 2221 111 1134443 4
Q ss_pred CCcchhhhHHHHHHHHhhcC-ccEEEeeeeec
Q 015291 238 ASCTTNCLAPFVKVMDEELG-IVKGAMTTTHS 268 (409)
Q Consensus 238 aSCTTn~Lapvlk~L~~~fG-I~~~~mTTiha 268 (409)
=|=..|-|.-+++-+-+.|+ =-.+.|.-+|-
T Consensus 130 ~s~Gv~l~~~~~~~aa~~l~~~~diei~E~HH 161 (272)
T 4f3y_A 130 MSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHH 161 (272)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSSCEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHhcCcCCCEEEEEecC
Confidence 44445666666666656554 11345555554
No 59
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.96 E-value=0.00015 Score=70.76 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=60.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||+|+| +|++||.+++++.+. ++++||++-|..+.+. .-.|. |.+.+ +....+.++
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~vd~~~~~~----~G~d~--gel~G-----------~~~~gv~v~-- 79 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR--KDVELCAVLVRKGSSF----VDKDA--SILIG-----------SDFLGVRIT-- 79 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEEBCCTTCTT----TTSBG--GGGTT-----------CSCCSCBCB--
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCCccc----cccch--HHhhc-----------cCcCCceee--
Confidence 68999999 999999999999875 5699999987532111 00111 11110 000012221
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
.+++++- .++|+|||+|......+.+...+++|.. +||
T Consensus 80 ~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 2333322 1689999999776667778888899984 455
No 60
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.96 E-value=0.00047 Score=67.63 Aligned_cols=95 Identities=15% Similarity=0.124 Sum_probs=63.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||||+|+|.||+..++.+... +.++|++|-|. +.+.+..+.+ .+|. .. +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~~~---~~g~---~~---------~---------- 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS--EKLKLVTCYSR-TEDKREKFGK---RYNC---AG---------D---------- 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEECS-SHHHHHHHHH---HHTC---CC---------C----------
T ss_pred CcceEEEEccCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HcCC---CC---------c----------
Confidence 368999999999999999998764 45999999886 3333222111 0110 00 0
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (354)
T 3db2_A 56 ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSGK-HIYVEKP 98 (354)
T ss_dssp SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-EEEEccC
Confidence 111111 112368999999999999999999999984 5777555
No 61
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.94 E-value=0.00064 Score=64.70 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=28.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
+|||+|+|+|++||.+++++.++ ++ +||++-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~-eLva~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GH-EIVGVIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TC-EEEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CC-EEEEEEec
Confidence 47999999999999999999886 45 89987664
No 62
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.94 E-value=0.0017 Score=63.76 Aligned_cols=92 Identities=27% Similarity=0.409 Sum_probs=62.1
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+. .++++... ++++|+||-|. +.+... -+ +. + +.++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~--~~~~l~av~d~-~~~~~~--~~-------~~-------~---------~~~~-- 56 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGT--PGLELAGVSSS-DASKVH--AD-------WP-------A---------IPVV-- 56 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHH--TT-------CS-------S---------CCEE--
T ss_pred CceEEEECCCHHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHH--hh-------CC-------C---------CceE--
Confidence 589999999999997 78888765 45999999986 333221 00 00 0 0111
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 57 SDPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp SCHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 122222 11236999999999999999999999999 46776444
No 63
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.92 E-value=0.0012 Score=65.29 Aligned_cols=93 Identities=23% Similarity=0.230 Sum_probs=62.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||+|+|.||+..++.|... +.++|++|-|. +.+.....-+| |. .++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~a~~~----g~--------------------~~~--~ 55 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA--DNLEVHGVFDI-LAEKREAAAQK----GL--------------------KIY--E 55 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECS-SHHHHHHHHTT----TC--------------------CBC--S
T ss_pred cCcEEEECcCHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHhc----CC--------------------cee--C
Confidence 58999999999999999988765 45999999886 33322211111 10 000 1
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 97 (359)
T 3e18_A 56 SYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKP 97 (359)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence 11111 11237899999999998889999999999 45776544
No 64
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.91 E-value=0.001 Score=65.72 Aligned_cols=99 Identities=26% Similarity=0.248 Sum_probs=64.0
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 84 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
+|++||||+|+|.||+..++.|..+ .+.++|++|-|. +.+.+..+.+ .+|. . ..++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~-~~~~~lvav~d~-~~~~~~~~a~---~~g~---~---------------~~~~- 76 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANT-VSGVEVVAVCDI-VAGRAQAALD---KYAI---E---------------AKDY- 76 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-CTTEEEEEEECS-STTHHHHHHH---HHTC---C---------------CEEE-
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhh-CCCcEEEEEEeC-CHHHHHHHHH---HhCC---C---------------Ceee-
Confidence 4578999999999999999998833 245999999886 2222211111 1110 0 0111
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 77 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 77 -NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 122221 11226899999999999999999999999 46777555
No 65
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.90 E-value=0.00087 Score=65.99 Aligned_cols=94 Identities=16% Similarity=0.221 Sum_probs=62.4
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+ .+++.|... +.++|++|-|. +.+....+.+ .+| . ..+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~g---~-----------------~~~-- 78 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAE--PLTEVTAIASR-RWDRAKRFTE---RFG---G-----------------EPV-- 78 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC--TTEEEEEEEES-SHHHHHHHHH---HHC---S-----------------EEE--
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhC--CCeEEEEEEcC-CHHHHHHHHH---HcC---C-----------------CCc--
Confidence 68999999999998 788988875 45999999876 3332221111 011 0 011
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||......+.+...+++|. .|++--|
T Consensus 79 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 79 EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 112368999999999999999999999985 4666444
No 66
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.89 E-value=0.0023 Score=63.02 Aligned_cols=92 Identities=22% Similarity=0.259 Sum_probs=62.2
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+. .++++... ++++|++|-|. +.+.++. +| . + +.++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~~-------~--------------~--~~~~-- 54 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVL--DEYQISKIMTS-RTEEVKR--DF-------P--------------D--AEVV-- 54 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECS-CHHHHHH--HC-------T--------------T--SEEE--
T ss_pred cceEEEEccCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh--hC-------C--------------C--CceE--
Confidence 589999999999997 67777654 56999999986 3332211 11 0 0 0111
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 222222 12237999999999999999999999999 46776544
No 67
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.87 E-value=0.00099 Score=66.71 Aligned_cols=97 Identities=19% Similarity=0.192 Sum_probs=63.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC------CCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~------~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I 159 (409)
+|||||+|+|.||+..++++.... .+.++||||-|+ +.+.+..+.+ +|+..
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~-~~~~a~~~a~------~~~~~---------------- 82 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ-DQAMAERHAA------KLGAE---------------- 82 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS-SHHHHHHHHH------HHTCS----------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC-CHHHHHHHHH------HcCCC----------------
Confidence 699999999999999888886421 124799999987 3333222211 11111
Q ss_pred EEEecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 160 ~v~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+++ .+.+++ ..+.++|+|+=||....-.+.+...+++|. -|++--|
T Consensus 83 ~~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 128 (412)
T 4gqa_A 83 KAY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYCEKP 128 (412)
T ss_dssp EEE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred eEE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEeecC
Confidence 011 111111 122378999999999999999999999995 5777555
No 68
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.84 E-value=0.0015 Score=62.18 Aligned_cols=122 Identities=16% Similarity=0.182 Sum_probs=73.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
|||+|+| +|++||.+++++.++ ++++|+++-|.. .
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~--~~~elva~~d~~------------------------------------------~ 36 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA--DDLTLSAELDAG------------------------------------------D 36 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC--TTCEEEEEECTT------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEccC------------------------------------------C
Confidence 5899999 699999999998765 358998886531 0
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccc---cC---c-C-CCcEE--
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKD---YD---H-E-VANIV-- 235 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~---~~---~-~-~~~II-- 235 (409)
+++.+. ..++|+|+|+|......+.+...+++|.. +||..+. .+.+. +. . . ...++
T Consensus 37 dl~~~~--~~~~DvvIDfT~p~a~~~~~~~a~~~g~~-~VigTTG-----------~~~e~~~~l~~aa~~~~~~~vv~a 102 (245)
T 1p9l_A 37 PLSLLT--DGNTEVVIDFTHPDVVMGNLEFLIDNGIH-AVVGTTG-----------FTAERFQQVESWLVAKPNTSVLIA 102 (245)
T ss_dssp CTHHHH--HTTCCEEEECSCTTTHHHHHHHHHHTTCE-EEECCCC-----------CCHHHHHHHHHHHHTSTTCEEEEC
T ss_pred CHHHHh--ccCCcEEEEccChHHHHHHHHHHHHcCCC-EEEcCCC-----------CCHHHHHHHHHHHHhCCCCCEEEE
Confidence 011100 01568999988887777888888888874 4453322 22221 11 0 0 12333
Q ss_pred ecCCcchhhhHHHHHHHHhhcCccEEEeeeeec
Q 015291 236 SNASCTTNCLAPFVKVMDEELGIVKGAMTTTHS 268 (409)
Q Consensus 236 SnaSCTTn~Lapvlk~L~~~fGI~~~~mTTiha 268 (409)
+|-|=-.|-|.-+++-.-+.| ..+.|.-.|-
T Consensus 103 ~N~siGv~ll~~l~~~aa~~~--~dieIiE~HH 133 (245)
T 1p9l_A 103 PNFAIGAVLSMHFAKQAARFF--DSAEVIELHH 133 (245)
T ss_dssp SCCCHHHHHHHHHHHHHGGGC--SEEEEEEEEC
T ss_pred CCccHHHHHHHHHHHHHHhhc--CCEEEEECcc
Confidence 344444555666666666666 3666666664
No 69
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.82 E-value=0.0025 Score=61.62 Aligned_cols=94 Identities=19% Similarity=0.278 Sum_probs=62.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||+|+|.||+.+++.|... +.+++++|-|. +.+....+.+ .+| . ..++ .
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~~~~v~d~-~~~~~~~~~~---~~~-----------~--------~~~~--~ 53 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS--GEYQLVAIYSR-KLETAATFAS---RYQ-----------N--------IQLF--D 53 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TSEEEEEEECS-SHHHHHHHGG---GSS-----------S--------CEEE--S
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHH---HcC-----------C--------CeEe--C
Confidence 37999999999999999998865 35899999886 3332211111 111 0 0111 2
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+++++- +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 54 ~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 54 QLEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp CHHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CHHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 222221 2378999999998888888999999985 4666444
No 70
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.82 E-value=0.00077 Score=65.82 Aligned_cols=97 Identities=15% Similarity=0.149 Sum_probs=62.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC-----CCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~-----~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~ 160 (409)
++||||+|+|.||+.-++++...+ ....+|+||-|+ +.+.+..+.+ +|... .
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-~~~~a~~~a~------~~g~~----------------~ 62 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-DAEAVRAAAG------KLGWS----------------T 62 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-SHHHHHHHHH------HHTCS----------------E
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-CHHHHHHHHH------HcCCC----------------c
Confidence 699999999999999888876431 012489999987 4433322221 11100 0
Q ss_pred EEecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 161 v~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
++ .+.+++ ..+.++|+|+=||....-.+.+...+++|. .|++-=|
T Consensus 63 ~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 107 (390)
T 4h3v_A 63 TE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAGK-HVLCEKP 107 (390)
T ss_dssp EE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred cc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-CceeecC
Confidence 11 122221 112379999999999999999999999994 5777444
No 71
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.81 E-value=0.0013 Score=63.40 Aligned_cols=93 Identities=20% Similarity=0.258 Sum_probs=62.4
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+++||||+|+|.+|+.+++.|.+. +.+++++|-|. +.+.+..+. .. +.++
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~--~~~~~v~v~d~-~~~~~~~~~-----------------~~--------~~~~-- 58 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL--PGAALVRLASS-NPDNLALVP-----------------PG--------CVIE-- 58 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC--TTEEEEEEEES-CHHHHTTCC-----------------TT--------CEEE--
T ss_pred CcceEEEECCcHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHH-----------------hh--------Cccc--
Confidence 358999999999999999999875 35899999876 332221110 11 1121
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+++++ ..+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 59 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~eKP 101 (315)
T 3c1a_A 59 SDWRSV-VSAPEVEAVIIATPPATHAEITLAAIASGK-AVLVEKP 101 (315)
T ss_dssp SSTHHH-HTCTTCCEEEEESCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHH-hhCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEcCC
Confidence 223222 112378999999999888888999999984 5666444
No 72
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.80 E-value=0.0014 Score=63.76 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=61.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||+|+|.||+.+++.|... ++++|++|-|. +.+....+. ..+| .. .++ .
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~--~~~~~~av~d~-~~~~~~~~a---~~~~-----------------~~--~~~--~ 57 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLA--GNGEVVAVSSR-TLESAQAFA---NKYH-----------------LP--KAY--D 57 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHH--CSEEEEEEECS-CSSTTCC------CCC-----------------CS--CEE--S
T ss_pred ceEEEEEechHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHH---HHcC-----------------CC--ccc--C
Confidence 58999999999999999998765 45899999875 222111110 0000 00 011 1
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 58 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 99 (329)
T 3evn_A 58 KLEDM-LADESIDVIYVATINQDHYKVAKAALLAGK-HVLVEKP 99 (329)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEccC
Confidence 22222 112368999999999988899999999994 5776555
No 73
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.80 E-value=0.0022 Score=63.17 Aligned_cols=92 Identities=17% Similarity=0.278 Sum_probs=62.0
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+. .++++... +.++|+||-|.. .+.++. + |+ +. .++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~-~~~~~~--~-------~~--------------~~--~~~-- 54 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTN--PHFELYKIVERS-KELSKE--R-------YP--------------QA--SIV-- 54 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHC--TTEEEEEEECSS-CCGGGT--T-------CT--------------TS--EEE--
T ss_pred ceEEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcCC-HHHHHH--h-------CC--------------CC--ceE--
Confidence 589999999999997 77887765 459999999862 222110 1 10 10 111
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 55 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (362)
T 3fhl_A 55 RSFKEL-TEDPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVVEKP 97 (362)
T ss_dssp SCSHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 222222 122369999999999988899999999994 5666444
No 74
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.79 E-value=0.00085 Score=66.41 Aligned_cols=36 Identities=31% Similarity=0.509 Sum_probs=30.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC------CCCceEEEEeCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDS 121 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~------~~~~~vVaInd~ 121 (409)
++||||.|+|.||+.+++.+.++. .++++|++|-|+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 389999999999999999998751 035999999986
No 75
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.78 E-value=0.0029 Score=61.43 Aligned_cols=92 Identities=17% Similarity=0.161 Sum_probs=59.6
Q ss_pred eeeEEEEcCChhHHHHHHHHH-hCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~-~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+..++.|. .. +.+++++|-|. +.+.+..+.+ .+| .. .++
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~--~~~~~vav~d~-~~~~~~~~a~---~~g---~~----------------~~~-- 60 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKI--QGVKLVAACAL-DSNQLEWAKN---ELG---VE----------------TTY-- 60 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTC--SSEEEEEEECS-CHHHHHHHHH---TTC---CS----------------EEE--
T ss_pred cceEEEEcCCHHHHHHHHHHHhcC--CCcEEEEEecC-CHHHHHHHHH---HhC---CC----------------ccc--
Confidence 589999999999999999987 44 45899999886 3332211111 011 00 011
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++
T Consensus 61 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~ 100 (346)
T 3cea_A 61 TNYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAGL-NVFC 100 (346)
T ss_dssp SCHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCCC-EEEE
Confidence 111111 111268999999999888889999999984 4555
No 76
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.78 E-value=0.0025 Score=65.74 Aligned_cols=94 Identities=20% Similarity=0.267 Sum_probs=60.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-------CCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR-------KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKL 158 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~-------~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~ 158 (409)
++||||.|+|.||+.+++.|.++ ..++++|++|-|. +.+....++ + +.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~-~~~~~~~~~--~--------------~~-------- 64 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR-NLDKAEALA--G--------------GL-------- 64 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS-CHHHHHHHH--T--------------TC--------
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC-CHHHhhhhc--c--------------cC--------
Confidence 58999999999999999988642 1246999999986 222111111 0 00
Q ss_pred EEEEecCCCCCCCccccCccEEEeCCCC-CCChhhHHHHHHcCCCEEEEeCC
Q 015291 159 IKVVSNRDPLQLPWAELGIDIVIEGTGV-FVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 159 I~v~~~~~p~~l~W~~~gvDiVle~TG~-f~s~e~a~~hl~aGakkVVISap 209 (409)
.++ .+++++ ..+.++|+|++|||. ....+.+...+++|. .||...|
T Consensus 65 -~~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 65 -PLT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp -CEE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred -ccc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 011 122221 122378999999985 677788999999986 3444344
No 77
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.77 E-value=0.0018 Score=52.00 Aligned_cols=98 Identities=22% Similarity=0.243 Sum_probs=58.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
|++||+|.|.|.||+.+++.|..+. ..+|+++.. +.+.+..+... +-.. .....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g--~~~v~~~~r--~~~~~~~~~~~---------------~~~~-------~~~d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSS--NYSVTVADH--DLAALAVLNRM---------------GVAT-------KQVDA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCS--SEEEEEEES--CHHHHHHHHTT---------------TCEE-------EECCT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC--CceEEEEeC--CHHHHHHHHhC---------------CCcE-------EEecC
Confidence 3469999999999999999998763 257776654 23322222110 0000 00000
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISa 208 (409)
.+++.+.-.-.++|+||.|+|.......+...++.|.+.+.++.
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCS
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecC
Confidence 11111100002789999999988777778888889997665543
No 78
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.75 E-value=0.0016 Score=63.36 Aligned_cols=96 Identities=19% Similarity=0.169 Sum_probs=63.2
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+++||||+|+|.||+.+++.|.+. +.++|++|-|. +.+....+.+ .+|. . .++
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~~---~----------------~~~-- 56 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES--AQAEVRGIASR-RLENAQKMAK---ELAI---P----------------VAY-- 56 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS--SSEEEEEEBCS-SSHHHHHHHH---HTTC---C----------------CCB--
T ss_pred CeEEEEEECchHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHH---HcCC---C----------------cee--
Confidence 358999999999999999999875 45899999886 3222222111 0110 0 000
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||......+.+...+++|. .|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 99 (330)
T 3e9m_A 57 GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQGK-PVLLEKP 99 (330)
T ss_dssp SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTTC-CEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCCC-eEEEeCC
Confidence 111111 111268999999999988899999999994 4777544
No 79
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.74 E-value=0.0016 Score=60.50 Aligned_cols=136 Identities=15% Similarity=0.198 Sum_probs=77.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~~ 166 (409)
|||||+|+|++|+.+++.|.. +.++++++-|... + ... +. .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~---~g~~lv~v~d~~~-~----------------------~~~----------~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER---NGFEIAAILDVRG-E----------------------HEK----------MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEEECSSC-C----------------------CTT----------EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHhc---CCCEEEEEEecCc-c----------------------hhh----------hc--CC
Confidence 589999999999999999874 3489988876411 0 001 11 22
Q ss_pred CCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcchhhhH
Q 015291 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (409)
Q Consensus 167 p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCTTn~La 246 (409)
++++-- .++|+|++|++.....+.+...+++|. .||+..|... +.+-...++- +........++-.+++... .
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~-~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~ 115 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAF-ADRDFLSRVR-EVCRKTGRRVYIASGAIGG--L 115 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGG-GSHHHHHHHH-HHHHHHCCCEEECCTTCSC--H
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccC-ChHHHHHHHH-HHHHhcCCeEEecCccccC--h
Confidence 332211 278999999998888888889999987 2333333210 1110000110 1111111233333344322 2
Q ss_pred HHHHHHHhhcCccEEEeeeeecc
Q 015291 247 PFVKVMDEELGIVKGAMTTTHSY 269 (409)
Q Consensus 247 pvlk~L~~~fGI~~~~mTTiha~ 269 (409)
..++.... |+++..+++.|..
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 116 DAIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHHhhc--cccEEEEEEEcCh
Confidence 34444443 8999999998876
No 80
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.72 E-value=0.0019 Score=63.26 Aligned_cols=95 Identities=21% Similarity=0.232 Sum_probs=63.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||+|+|.||+..++.+.... +.++|++|-|. +.+.+..+.+ .+| +.++ .
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~~~---~~~--------------------~~~~--~ 65 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHA-DRAELIDVCDI-DPAALKAAVE---RTG--------------------ARGH--A 65 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HHC--------------------CEEE--S
T ss_pred cceEEEEcCcHHHHHHHHHHHhCC-CCeEEEEEEcC-CHHHHHHHHH---HcC--------------------Ccee--C
Confidence 589999999999999999998762 45999999886 3333222111 011 0111 1
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+.+++ ..+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 66 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 66 SLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp CHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 22222 11237899999999998889999999998 45666444
No 81
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.68 E-value=0.0034 Score=62.08 Aligned_cols=92 Identities=17% Similarity=0.335 Sum_probs=61.3
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+. .++++... +.++|+||-|. +.+.+.. + +. +- .++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~-------~~-------~~---------~~~-- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSV--PGLNLAFVASR-DEEKVKR--D-------LP-------DV---------TVI-- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHHH--H-------CT-------TS---------EEE--
T ss_pred cceEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh--h-------CC-------CC---------cEE--
Confidence 589999999999997 77877754 45999999986 3332210 1 11 00 111
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 99 (364)
T 3e82_A 57 ASPEAA-VQHPDVDLVVIASPNATHAPLARLALNAGK-HVVVDKP 99 (364)
T ss_dssp SCHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEeCC
Confidence 122221 112378999999999999999999999994 5666444
No 82
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.67 E-value=0.0013 Score=65.61 Aligned_cols=94 Identities=14% Similarity=0.176 Sum_probs=63.6
Q ss_pred ceeeEEEEcCC-hhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhh-cccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 85 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 85 m~ikVaInGfG-rIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll-~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
|++||||+|+| ++|+..++.+... +.++|++|-|. +.+....+. +|+- .++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~~~g~------------------------~~~ 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHH--PDAQIVAACDP-NEDVRERFGKEYGI------------------------PVF 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHC--TTEEEEEEECS-CHHHHHHHHHHHTC------------------------CEE
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHHHcCC------------------------CeE
Confidence 57899999999 9999999998865 45999999986 333221111 1110 011
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||......+.+...+++|. .|++--|
T Consensus 54 --~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 96 (387)
T 3moi_A 54 --ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQGL-HIIVEKP 96 (387)
T ss_dssp --SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred --CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-ceeeeCC
Confidence 122222 112368999999999888899999999994 5666444
No 83
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.63 E-value=0.0029 Score=62.17 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=62.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||+|+|.||+.+++.|... +.+++++|-|. +.+....+.+ .+|. + .. ..++ .
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~--~~~~lv~v~d~-~~~~~~~~a~---~~~~-~-------~~--------~~~~--~ 61 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLA--PNATISGVASR-SLEKAKAFAT---ANNY-P-------ES--------TKIH--G 61 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---HTTC-C-------TT--------CEEE--S
T ss_pred ceEEEEECchHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCC-C-------CC--------Ceee--C
Confidence 58999999999999999998875 45899999886 3332221111 1110 0 00 0111 1
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 62 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 62 SYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 22211 111268999999999888899999999985 4666434
No 84
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.61 E-value=0.0029 Score=61.76 Aligned_cols=97 Identities=21% Similarity=0.220 Sum_probs=61.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-----CCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR-----KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~-----~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~ 160 (409)
++||||+|+|+||+.-++++... ..+.++||||-|+ +.+.+..+.+ +|+.. +
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-~~~~a~~~a~------~~g~~----------------~ 81 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-NAGLAEARAG------EFGFE----------------K 81 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC---TTHHHHHH------HHTCS----------------E
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-CHHHHHHHHH------HhCCC----------------e
Confidence 69999999999999887776431 1245899999987 3222221111 11101 0
Q ss_pred EEecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 161 v~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
++ .+.+++ ..+.++|+|+=||....-.+.+...+++|. .|++-=|
T Consensus 82 ~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKP 126 (393)
T 4fb5_A 82 AT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKP 126 (393)
T ss_dssp EE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred ec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccC
Confidence 11 111111 112378999999999999999999999986 4666434
No 85
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.60 E-value=0.00096 Score=65.93 Aligned_cols=36 Identities=33% Similarity=0.549 Sum_probs=29.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC-----CCCceEEEEeCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDS 121 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~-----~~~~~vVaInd~ 121 (409)
++||||.|+|.||+.+++.|.+++ ..+++|++|-|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 589999999999999999997642 114899999885
No 86
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.51 E-value=0.0035 Score=64.69 Aligned_cols=106 Identities=17% Similarity=0.309 Sum_probs=59.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecC-CeEE---ECCeEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDN-ETIS---VDGKLIKV 161 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~-~~l~---v~gk~I~v 161 (409)
++||||+|+|+||+.+++.+... +.++|++|-|. +.+......+ ..+|. ...+...++ ..+. -.+ .+.+
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~--~~veLvAV~D~-~~era~~~a~--~~yG~-~~~~~~~~~~~~i~~a~~~g-~~~v 95 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARM--QGIEVGALSAR-RLPNTFKAIR--TAYGD-EENAREATTESAMTRAIEAG-KIAV 95 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS--SSEEEEEEECS-STHHHHHHHH--HHHSS-STTEEECSSHHHHHHHHHTT-CEEE
T ss_pred ceEEEEECChHHHHHHHHHHhhC--CCcEEEEEEeC-CHHHHHHHHH--HhcCC-ccccccccchhhhhhhhccC-CceE
Confidence 58999999999999999988754 56999999987 3333322221 00120 001100000 0000 001 1222
Q ss_pred EecCCCCCCCccccCccEEEeCCCCC-CChhhHHHHHHcCC
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVF-VDGPGAGKHIQAGA 201 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f-~s~e~a~~hl~aGa 201 (409)
+ .|.+++ ..+.++|+|++|||.. ...+.+...+++|.
T Consensus 96 ~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 96 T--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp E--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred E--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 2 233222 1223799999999864 44678889999986
No 87
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.51 E-value=0.0047 Score=62.77 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=63.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhc-ccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~-yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
+++||||+|+|.||+..++.|... +.++|++|-|. +.+.+..+.+ +. .+|. + + ..++.
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~--~~~~lvav~d~-~~~~~~~~a~~~~-~~g~-~-------~---------~~~~~ 77 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARR--DDVEIVAFADP-DPYMVGRAQEILK-KNGK-K-------P---------AKVFG 77 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-CHHHHHHHHHHHH-HTTC-C-------C---------CEEEC
T ss_pred CCceEEEEecCHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHHHHH-hcCC-C-------C---------Cceec
Confidence 368999999999999999988765 45999999987 3332222111 00 0110 0 0 01111
Q ss_pred --cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 164 --NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 164 --~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
+.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++-
T Consensus 78 ~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~E 121 (444)
T 2ixa_A 78 NGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGME 121 (444)
T ss_dssp SSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred cCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEe
Confidence 0122222 112369999999999988899999999985 46553
No 88
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.48 E-value=0.0019 Score=62.03 Aligned_cols=135 Identities=16% Similarity=0.171 Sum_probs=77.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
.|||+|.|||.|||.++|. + ++|++++-+ + . .+ .| |- .+ ..
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~---~leLv~v~~--~--k---------------------~g-el---gv--~a--~~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G---NFEKIYAYD--R--I---------------------SK-DI---PG--VV--RL 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S---CCSEEEEEC--S--S---------------------CC-CC---SS--SE--EC
T ss_pred cceEEEECcCHHHHHHHhc---C---CcEEEEEEe--c--c---------------------cc-cc---Cc--ee--eC
Confidence 5799999999999999997 2 389988754 1 0 01 12 21 12 14
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEE--ecCCcchh
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIV--SNASCTTN 243 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~II--SnaSCTTn 243 (409)
|.+++.. +.|+|+||++...-+++.++.|++|..-|+.|....- | |-+.-.+..-.-... .+|. |-+..--.
T Consensus 53 d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S~gaLa-d-~~l~~~L~~aA~~gg-~~l~vpSGAi~GlD 126 (253)
T 1j5p_A 53 DEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVNYIIISTSAFA-D-EVFRERFFSELKNSP-ARVFFPSGAIGGLD 126 (253)
T ss_dssp SSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSEEEECCGGGGG-S-HHHHHHHHHHHHTCS-CEEECCCTTCCCHH
T ss_pred CHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCCEEEcChhhhc-C-HHHHHHHHHHHHHCC-CeEEecCCcccchh
Confidence 6676652 6899999999887667789999999854333321110 1 100000000000111 2332 33333222
Q ss_pred hhHHHHHHHHhhcCccEEEeeeeecccc
Q 015291 244 CLAPFVKVMDEELGIVKGAMTTTHSYTG 271 (409)
Q Consensus 244 ~Lapvlk~L~~~fGI~~~~mTTiha~Tg 271 (409)
.|+... -+|+++.++|+-+..+
T Consensus 127 ----~l~aa~--g~l~~V~~~t~K~P~~ 148 (253)
T 1j5p_A 127 ----VLSSIK--DFVKNVRIETIKPPKS 148 (253)
T ss_dssp ----HHHHHG--GGEEEEEEEEEECGGG
T ss_pred ----HHHHhc--CCccEEEEEEeCChHH
Confidence 233323 6899999999988754
No 89
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.46 E-value=0.0027 Score=62.14 Aligned_cols=87 Identities=22% Similarity=0.211 Sum_probs=60.8
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+ ..++++... ++++|+||-|.. .+ ++ | ++++
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~--~~~~lvav~d~~-~~-------------~~---------------g--~~~~-- 69 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKN--ANFKLVATASRH-GT-------------VE---------------G--VNSY-- 69 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHC--TTEEEEEEECSS-CC-------------CT---------------T--SEEE--
T ss_pred CceEEEEecCHHHHHHHHHHHHhC--CCeEEEEEEeCC-hh-------------hc---------------C--CCcc--
Confidence 58999999999999 799999875 459999998861 11 00 0 0111
Q ss_pred CCCCCCCccc-cCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAE-LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~-~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+ .++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 70 ~~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 113 (330)
T 4ew6_A 70 TTIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKP 113 (330)
T ss_dssp SSHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCC
Confidence 122222 111 26899999999988889999999999 45666444
No 90
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.42 E-value=0.004 Score=59.99 Aligned_cols=92 Identities=16% Similarity=0.168 Sum_probs=60.1
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+. +++.|... +.+++++|-|.. .+....+.+ .+|. .+ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~--~~~~lvav~d~~-~~~~~~~~~---~~g~--------------------~~--~ 56 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAA--SDWTLQGAWSPT-RAKALPICE---SWRI--------------------PY--A 56 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSC--SSEEEEEEECSS-CTTHHHHHH---HHTC--------------------CB--C
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCeEEEEEECCC-HHHHHHHHH---HcCC--------------------Cc--c
Confidence 589999999999996 88988754 458999998862 221111110 0110 01 0
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+++.+ +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 57 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 122222 1378999999998888888999999985 4666444
No 91
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.37 E-value=0.0055 Score=59.88 Aligned_cols=96 Identities=21% Similarity=0.239 Sum_probs=63.7
Q ss_pred eeeEEEEcCC-hhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfG-rIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+| .+|+..++.+.... +.++|++|-|. +.+....+.+ .+|. . .++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~a~---~~~~---~----------------~~~-- 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLS-HLFEITAVTSR-TRSHAEEFAK---MVGN---P----------------AVF-- 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTT-TTEEEEEEECS-SHHHHHHHHH---HHSS---C----------------EEE--
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCC-CceEEEEEEcC-CHHHHHHHHH---HhCC---C----------------ccc--
Confidence 5899999999 89999999987641 45999999987 3333322211 1110 0 111
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 72 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 114 (340)
T 1zh8_A 72 DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKP 114 (340)
T ss_dssp SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 112368999999999888899999999994 5766544
No 92
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.36 E-value=0.0042 Score=61.31 Aligned_cols=95 Identities=16% Similarity=0.211 Sum_probs=62.3
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+. +++.|... ++++|++|-|. +.+.+..+.+ +|. +. .++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~------~~~--------------~~--~~~-- 57 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQM--QDIRIVAACDS-DLERARRVHR------FIS--------------DI--PVL-- 57 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTC--TTEEEEEEECS-SHHHHGGGGG------TSC--------------SC--CEE--
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHH------hcC--------------CC--ccc--
Confidence 589999999999995 88988765 45999999886 3333221111 010 00 111
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 58 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 100 (359)
T 3m2t_A 58 DNVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKP 100 (359)
T ss_dssp SSHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 122222 112368999999999888899999999985 4666444
No 93
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.33 E-value=0.0033 Score=60.33 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=61.6
Q ss_pred ceeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 85 m~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
+++||||+|+|.||+. +++.|... +.+++++|-|. +.+.+..+.+ .+|. .. +
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~~~---~~---------~--------- 57 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKS--ERFEFVGAFTP-NKVKREKICS---DYRI---MP---------F--------- 57 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSC--SSSEEEEEECS-CHHHHHHHHH---HHTC---CB---------C---------
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcCC---CC---------c---------
Confidence 3689999999999996 88888754 45899999886 3332222211 0110 00 0
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++- + ++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 58 -~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (308)
T 3uuw_A 58 -DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKP 98 (308)
T ss_dssp -SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred -CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCC
Confidence 1122111 1 68999999999998899999999985 4666444
No 94
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.29 E-value=0.0093 Score=60.54 Aligned_cols=99 Identities=18% Similarity=0.173 Sum_probs=62.6
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.+|+ .+++.|.+. +.++||+|-|. +.+....+.+ .+|. . .. .+.+ .
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~a~---~~g~---~-----~~-------~~~~--~ 139 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGC--QHSRIEALVSG-NAEKAKIVAA---EYGV---D-----PR-------KIYD--Y 139 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTC--SSEEEEEEECS-CHHHHHHHHH---HTTC---C-----GG-------GEEC--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCC---C-----cc-------cccc--c
Confidence 68999999999997 888988654 45899999986 3332211111 1110 0 00 0111 1
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++- .+.++|+|+.||......+.+...+++|. .|++--|
T Consensus 140 ~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKP 182 (433)
T 1h6d_A 140 SNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKP 182 (433)
T ss_dssp SSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 2233321 12368999999999988899999999985 4666333
No 95
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.16 E-value=0.012 Score=56.81 Aligned_cols=94 Identities=19% Similarity=0.266 Sum_probs=58.9
Q ss_pred ceeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 85 m~ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
|++||||+|+|.||+. +++.|... +.++|+ |-|. +.+.+..+.+ .+|. . . ..
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~--~~~~l~-v~d~-~~~~~~~~a~---~~g~---~-------~--------~~-- 53 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQW--PDIELV-LCTR-NPKVLGTLAT---RYRV---S-------A--------TC-- 53 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTS--TTEEEE-EECS-CHHHHHHHHH---HTTC---C-------C--------CC--
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhC--CCceEE-EEeC-CHHHHHHHHH---HcCC---C-------c--------cc--
Confidence 5689999999999984 88988654 458998 8776 3332221111 0110 0 0 00
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
....+.+ +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 54 ~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 54 TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 0111222 2379999999998888888888999885 3555433
No 96
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.09 E-value=0.011 Score=58.98 Aligned_cols=36 Identities=25% Similarity=0.423 Sum_probs=30.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC-CCCceEEEEeCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDS 121 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~-~~~~~vVaInd~ 121 (409)
++||||.|+|.||+.+++.+.+++ ..+++|++|-|.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 589999999999999999998763 225899999874
No 97
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.08 E-value=0.0028 Score=61.04 Aligned_cols=99 Identities=21% Similarity=0.266 Sum_probs=59.6
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGf-GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+|||+|+|. |++||.+++.+.+. ++++||++-|..+.. +...|. |.+.+- .. .| +.+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~--~~~elva~~d~~~~~----~~g~d~--~~~~g~------~~---~~--v~~~-- 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALAL--EGVQLGAALEREGSS----LLGSDA--GELAGA------GK---TG--VTVQ-- 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS--TTEECCCEECCTTCT----TCSCCT--TCSSSS------SC---CS--CCEE--
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCchh----hhhhhH--HHHcCC------Cc---CC--ceec--
Confidence 489999995 99999999988765 458998876641100 000010 111100 00 01 2232
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+++++- . ++|+|+|+|......+.+...+++|.. +|+..+
T Consensus 64 ~dl~~~l-~--~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 64 SSLDAVK-D--DFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp SCSTTTT-T--SCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred CCHHHHh-c--CCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 3444332 2 689999998776677888888999974 566443
No 98
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.88 E-value=0.012 Score=56.56 Aligned_cols=90 Identities=21% Similarity=0.211 Sum_probs=59.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-CCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR-KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~-~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.||+..++.+... ..+.+++++|-|... +. ..+ | +..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-------~a--~~~------------------g--~~~--- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-------LG--SLD------------------E--VRQ--- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-------CC--EET------------------T--EEB---
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-------HH--HHc------------------C--CCC---
Confidence 58999999999999999987641 024589999987410 00 000 1 010
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 55 ~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (294)
T 1lc0_A 55 ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYP 97 (294)
T ss_dssp CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCC
Confidence 122221 112379999999999988899999999985 4666433
No 99
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.74 E-value=0.0024 Score=62.28 Aligned_cols=96 Identities=11% Similarity=0.086 Sum_probs=60.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCC---hhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG---VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~---~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
|++||||+|+|.+|+..++.+ . +.++|+||-|... .+.++...+ .+|. + .++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~--~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---------------~---~~~ 55 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--D--EECSITGIAPGVPEEDLSKLEKAIS---EMNI---------------K---PKK 55 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--C--TTEEEEEEECSSTTCCCHHHHHHHH---TTTC---------------C---CEE
T ss_pred CceEEEEEccchhHHHHHHhc--C--CCcEEEEEecCCchhhHHHHHHHHH---HcCC---------------C---Ccc
Confidence 679999999999999888877 2 4699999998621 222222111 0110 0 011
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+ .+.+++ ..+.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 99 (337)
T 3ip3_A 56 Y--NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKP 99 (337)
T ss_dssp C--SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred c--CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCC
Confidence 1 222222 122368999999999888899999999995 4666434
No 100
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.63 E-value=0.013 Score=56.46 Aligned_cols=91 Identities=18% Similarity=0.173 Sum_probs=57.8
Q ss_pred eeEEEEcCChhHHHH-HHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAINGFGRIGRNF-LRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInGfGrIGr~v-lr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
|||||+|+|.+|+.+ ++.|.+ . .+++++|-|. +.+....+.+ .+|. . .++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~--~~~~vav~d~-~~~~~~~~~~---~~g~---~----------------~~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-T--GGEVVSMMST-SAERGAAYAT---ENGI---G----------------KSV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-T--TCEEEEEECS-CHHHHHHHHH---HTTC---S----------------CCB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-C--CCeEEEEECC-CHHHHHHHHH---HcCC---C----------------ccc--C
Confidence 589999999999998 888876 3 4899999886 3332222111 0110 0 000 1
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++-
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~e 92 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCE 92 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEe
Confidence 11111 011268999999998888888889999984 46553
No 101
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=95.55 E-value=0.012 Score=59.66 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=57.7
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEE-eCCCChhhhhhhh-cccccccccCceEEEecCCe---EE--ECCeE
Q 015291 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVV-NDSGGVKNASHLL-KYDSLLGTFKADVKIVDNET---IS--VDGKL 158 (409)
Q Consensus 87 ikVaInGf-GrIGr~vlr~l~~~~~~~~~vVaI-nd~~~~~~~a~Ll-~yDS~~G~f~~~v~~~~~~~---l~--v~gk~ 158 (409)
+||+|.|+ |.||+.+++.+..++ ..++++++ .+. +++.+.... +|... .+.+.+.+. +. +.+..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p-~~~~v~al~ag~-ni~~l~~~~~~f~~~------~v~v~d~~~~~~l~~~l~~~~ 76 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNL-DRYQVIALTANR-NVKDLADAAKRTNAK------RAVIADPSLYNDLKEALAGSS 76 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTG-GGEEEEEEEESS-CHHHHHHHHHHTTCS------EEEESCGGGHHHHHHHTTTCS
T ss_pred eEEEEECCCeEeHHHHHHHHHhCc-CcEEEEEEEcCC-CHHHHHHHHHHcCCc------EEEEcChHHHHHHHHHhccCC
Confidence 79999995 999999999998753 24999988 332 444333222 12110 111000000 00 01101
Q ss_pred EEEEe-cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 159 IKVVS-NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 159 I~v~~-~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
+.++. ..+..++- ... +|+|+++++.+...+.+-..+++|. .|+.
T Consensus 77 ~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aGK-~Vvl 122 (388)
T 1r0k_A 77 VEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKGK-TVAL 122 (388)
T ss_dssp SEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTTS-EEEE
T ss_pred cEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCCC-EEEE
Confidence 12221 11111111 122 8999999954667777778888884 4444
No 102
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.51 E-value=0.022 Score=55.18 Aligned_cols=94 Identities=18% Similarity=0.256 Sum_probs=61.5
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGf-GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+ |.||+..++++... +.++|||-|+.. +. +. + +.. ++ + ..++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~~-~~-~~-~--~~~---~~--------------~--~~~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV---GGVLVASLDPAT-NV-GL-V--DSF---FP--------------E--AEFF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT---TCEEEEEECSSC-CC-GG-G--GGT---CT--------------T--CEEE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC---CCEEEEEEcCCH-HH-HH-H--Hhh---CC--------------C--Ccee--
Confidence 379999999 79999999999875 379999998622 11 11 1 110 11 0 0111
Q ss_pred CCCCCCC-----c--cccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLP-----W--AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~-----W--~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++. | .+.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 104 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-NALSEKP 104 (312)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCC-eEEEECC
Confidence 1111110 0 22379999999999999999999999994 5666433
No 103
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.46 E-value=0.018 Score=53.48 Aligned_cols=95 Identities=19% Similarity=0.161 Sum_probs=62.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
..||+|+|.|.+|+.+++.+... . .+++|++=|. +++. .+. .++|.+ |....
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~-~-g~~iVg~~D~-dp~k---------------------~g~--~i~gv~--V~~~~ 131 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFG-E-SFELRGFFDV-DPEK---------------------VGR--PVRGGV--IEHVD 131 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCC-S-SEEEEEEEES-CTTT---------------------TTC--EETTEE--EEEGG
T ss_pred CCEEEEECccHHHHHHHHhHhhc-C-CcEEEEEEeC-CHHH---------------------Hhh--hhcCCe--eecHH
Confidence 36899999999999999863322 3 5899998774 2111 011 134433 32223
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps 210 (409)
+.+++ ..+ ++|.|+-|++.....+-+...+++|.+-++.-.|.
T Consensus 132 dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 132 LLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred hHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 33332 234 79999999998766677788889998766665664
No 104
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.40 E-value=0.017 Score=57.09 Aligned_cols=94 Identities=12% Similarity=0.183 Sum_probs=60.2
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+|.+|+ .++.++.. +.++|+||-|. +.+....+.+ .+|. . .++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~---~~~~lvav~d~-~~~~a~~~a~---~~~~---~----------------~~~-- 77 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR---AGARLAGFHEK-DDALAAEFSA---VYAD---A----------------RRI-- 77 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH---TTCEEEEEECS-CHHHHHHHHH---HSSS---C----------------CEE--
T ss_pred CcEEEEECcCHHHHHHHHHHhhc---CCcEEEEEEcC-CHHHHHHHHH---HcCC---C----------------ccc--
Confidence 58999999999995 46666653 45899999987 3333222111 1110 0 011
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 78 ~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 120 (361)
T 3u3x_A 78 ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHGK-DVLVDKP 120 (361)
T ss_dssp SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTTC-EEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEeCC
Confidence 112221 112369999999999988899999999994 5776555
No 105
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.14 E-value=0.031 Score=54.27 Aligned_cols=94 Identities=17% Similarity=0.153 Sum_probs=61.7
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGf-GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
++||||+|+ |.||+..++++... ..+++||-|+.. +. +. + +.. ++ + .+++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~~-~~-~~-~--~~~---~~--------------~--~~~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT---GNCLVSAYDIND-SV-GI-I--DSI---SP--------------Q--SEFF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT---TCEEEEEECSSC-CC-GG-G--GGT---CT--------------T--CEEE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC---CCEEEEEEcCCH-HH-HH-H--Hhh---CC--------------C--CcEE--
Confidence 479999999 79999999999875 379999998622 11 10 1 111 11 0 0111
Q ss_pred CCCCCCC--------ccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 165 RDPLQLP--------WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 165 ~~p~~l~--------W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++. ..+.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 105 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVICEKP 105 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 1111110 013479999999999999999999999994 5666433
No 106
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.07 E-value=0.037 Score=53.57 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=58.5
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhh-cccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 86 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll-~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
++||||+|+|.+|. .+++.+.. +.++|++|-|. +.+....+- +|. +. .++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~---~~~~lvav~d~-~~~~~~~~a~~~~-------~~----------------~~~- 55 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID---AGAELAGVFES-DSDNRAKFTSLFP-------SV----------------PFA- 55 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH---TTCEEEEEECS-CTTSCHHHHHHST-------TC----------------CBC-
T ss_pred ccEEEEECCChHHHHHhhhhhcC---CCcEEEEEeCC-CHHHHHHHHHhcC-------CC----------------ccc-
Confidence 58999999999996 67777753 34899999986 222211111 110 00 000
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 -ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp -SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred -CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 112268999999999988899999999985 4666434
No 107
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.75 E-value=0.043 Score=56.58 Aligned_cols=99 Identities=10% Similarity=0.131 Sum_probs=64.4
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 86 ~ikVaInGf----GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
++||||+|+ |.+|+..+++|.... +.++||||-|. +.+....+.+ .+|. + . +.+
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~-~~~~lvav~d~-~~~~a~~~a~---~~g~-~--------~--------~~~ 96 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLS-SQFQIVALYNP-TLKSSLQTIE---QLQL-K--------H--------ATG 96 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTT-TTEEEEEEECS-CHHHHHHHHH---HTTC-T--------T--------CEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcC-CCeEEEEEEeC-CHHHHHHHHH---HcCC-C--------c--------cee
Confidence 589999999 999999999998651 35899999986 3332211111 1110 0 0 011
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCC-----CEEEEeCC
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAP 209 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGa-----kkVVISap 209 (409)
+ .+.+++ ..+.++|+|+-||+...-.+.+...+++|. |.|++--|
T Consensus 97 ~--~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 97 F--DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp E--SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred e--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 1 122221 112268999999999888899999999994 66777544
No 108
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.58 E-value=0.024 Score=52.85 Aligned_cols=99 Identities=21% Similarity=0.257 Sum_probs=62.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
..||+|+|.|..|+.+++.+.. ....+++||+=|. +++. ..|+ .. ++|- +|....
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~-~~~g~~iVg~~D~-dp~~---------kiG~----------~~--i~Gv--pV~~~~ 138 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFH-DRNKMQISMAFDL-DSND---------LVGK----------TT--EDGI--PVYGIS 138 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCC-TTSSEEEEEEEEC-TTST---------TTTC----------BC--TTCC--BEEEGG
T ss_pred CCEEEEECcCHHHHHHHHhhhc-ccCCeEEEEEEeC-Cchh---------ccCc----------ee--ECCe--EEeCHH
Confidence 3689999999999999886432 2245899888664 2110 0111 01 2332 333322
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps 210 (409)
+.+++ -.+.++|+++-|++.....+-+..-.++|.+.++--+|.
T Consensus 139 dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 139 TINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 22211 134589999999988776677888889999987777774
No 109
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.57 E-value=0.026 Score=55.68 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=26.4
Q ss_pred CccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 176 GIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 176 gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
++|+|+-||+.....+.+...+++|. .|++
T Consensus 83 ~iD~V~i~tp~~~h~~~~~~al~~Gk-~V~~ 112 (383)
T 3oqb_A 83 NDTMFFDAATTQARPGLLTQAINAGK-HVYC 112 (383)
T ss_dssp SCCEEEECSCSSSSHHHHHHHHTTTC-EEEE
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCC-eEEE
Confidence 68999999999999999999999994 4655
No 110
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.55 E-value=0.046 Score=50.88 Aligned_cols=95 Identities=18% Similarity=0.208 Sum_probs=58.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
.+||+|+|.|.+|+.+++.+... ...+++|++-|. +++. .+. .++|.+ |....
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~-~~g~~iVg~~D~-dp~k---------------------~g~--~i~gv~--V~~~~ 137 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTK-NNNTKISMAFDI-NESK---------------------IGT--EVGGVP--VYNLD 137 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC-------CCEEEEEES-CTTT---------------------TTC--EETTEE--EEEGG
T ss_pred CCEEEEEccCHHHHHHHHHHhcc-cCCcEEEEEEeC-CHHH---------------------HHh--HhcCCe--eechh
Confidence 36899999999999999942211 234899988774 2211 111 134433 32223
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps 210 (409)
+.+++- .+ . |+|+-|++.....+-+...+++|.+.++.-+|.
T Consensus 138 dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 138 DLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp GHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred hHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 333221 12 3 999999998766677888889999877777775
No 111
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=94.47 E-value=0.021 Score=57.98 Aligned_cols=99 Identities=9% Similarity=0.082 Sum_probs=64.5
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 86 ~ikVaInGf----GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
++||||+|+ |.+|+..++.|.... +.++||+|-|. +.+.+..+.+ .+|. . . +.+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~a~---~~g~---~------~--------~~~ 77 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLS-SQFQITALYSP-KIETSIATIQ---RLKL---S------N--------ATA 77 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HTTC---T------T--------CEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcC-CCeEEEEEEeC-CHHHHHHHHH---HcCC---C------c--------cee
Confidence 489999999 999999999998751 35999999986 3332211111 1110 0 0 011
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCC-----CEEEEeCC
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAP 209 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGa-----kkVVISap 209 (409)
+ .+.+++ ..+.++|+|+-||+.....+.+...+++|. |.|++--|
T Consensus 78 ~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 78 F--PTLESF-ASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp E--SSHHHH-HHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred e--CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 1 122222 112368999999999888899999999994 66777544
No 112
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=94.42 E-value=0.12 Score=44.55 Aligned_cols=84 Identities=24% Similarity=0.313 Sum_probs=57.5
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 86 ~ikVaInGf----GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
+.+|||+|. |++|+.+++.|.+.. ++|..+|.. .+. +.|. ++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G---~~V~~vnp~---------------------------~~~--i~G~--~~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG---FEVLPVNPN---------------------------YDE--IEGL--KC 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT---------------------------CSE--ETTE--EC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC---CEEEEeCCC---------------------------CCe--ECCe--ee
Confidence 468999998 999999999988754 577777632 011 2332 22
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeC
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISa 208 (409)
+ .++++++- .+|+|+-++......+-+...+++|++.+++..
T Consensus 60 ~--~s~~el~~---~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 60 Y--RSVRELPK---DVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp B--SSGGGSCT---TCCEEEECSCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred c--CCHHHhCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 2 34555652 689999999865444555566678998887754
No 113
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.38 E-value=0.11 Score=51.93 Aligned_cols=92 Identities=24% Similarity=0.281 Sum_probs=57.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
++||||+|+| .|+.-++++.... +.++||||-|. +.+....+- ..+| ++++ .
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~-~~~elvav~~~-~~~~a~~~a---~~~g--------------------v~~~--~ 58 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPP-EGLELVGLLAQ-GSARSRELA---HAFG--------------------IPLY--T 58 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCC-TTEEEEEEECC-SSHHHHHHH---HHTT--------------------CCEE--S
T ss_pred CCEEEEEehH-HHHHHHHHHHhCC-CCeEEEEEECC-CHHHHHHHH---HHhC--------------------CCEE--C
Confidence 6899999999 6999888876543 35999999987 222221111 1111 1122 2
Q ss_pred CCCCCCccccCccEEEeCCCCCCC----hhhHHHHHHcCCCEEEEeCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s----~e~a~~hl~aGakkVVISap 209 (409)
+.+++. . ++|+|+=||....- .+.+...+++|. -|++--|
T Consensus 59 ~~~~l~-~--~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKP 102 (372)
T 4gmf_A 59 SPEQIT-G--MPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHP 102 (372)
T ss_dssp SGGGCC-S--CCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESC
T ss_pred CHHHHh-c--CCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecC
Confidence 334443 2 58888889887765 577889999986 4666544
No 114
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.24 E-value=0.39 Score=44.34 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=27.8
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|++||.|.|.|.||+.+++.|.++. .+|+++..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG---WRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT---CEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC---CEEEEEEc
Confidence 5679999999999999999998764 58888865
No 115
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.15 E-value=0.06 Score=54.14 Aligned_cols=97 Identities=22% Similarity=0.210 Sum_probs=60.3
Q ss_pred eeeEEEEcCCh---hHHHHHHHHHhCCCCCceEEE-EeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 86 KLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 86 ~ikVaInGfGr---IGr~vlr~l~~~~~~~~~vVa-Ind~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
++||||+|+|+ ||+..++++... +.++||+ |-|. +.+....+.+ .+|. + .. ++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~---~~g~-~-------~~---------~~ 93 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLD--DHYELVAGALSS-TPEKAEASGR---ELGL-D-------PS---------RV 93 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHT--SCEEEEEEECCS-SHHHHHHHHH---HHTC-C-------GG---------GB
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhC--CCcEEEEEEeCC-CHHHHHHHHH---HcCC-C-------cc---------cc
Confidence 68999999999 999998887764 4589997 8776 3333221111 1110 0 00 00
Q ss_pred EecCCCCCCCccc-----cCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 162 VSNRDPLQLPWAE-----LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 162 ~~~~~p~~l~W~~-----~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
+ .+.+++ ..+ .++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 94 ~--~~~~~l-l~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 142 (417)
T 3v5n_A 94 Y--SDFKEM-AIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKP 142 (417)
T ss_dssp C--SCHHHH-HHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESS
T ss_pred c--CCHHHH-HhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECC
Confidence 0 111111 011 268999999999999999999999985 4666544
No 116
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.07 E-value=0.088 Score=47.04 Aligned_cols=31 Identities=23% Similarity=0.472 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4899999 9999999999998764 68877764
No 117
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=93.83 E-value=0.17 Score=50.97 Aligned_cols=108 Identities=15% Similarity=0.160 Sum_probs=60.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhh-cccccccccCceEEEecCCeE--EECCeEEEEE
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETI--SVDGKLIKVV 162 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll-~yDS~~G~f~~~v~~~~~~~l--~v~gk~I~v~ 162 (409)
.||+|.| +|.||+..++++... +.++|+|+.--.+.+.++... +|... -+.+.++... .+. . .+.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~~~~vvaL~a~~n~~~l~~q~~~f~p~------~v~v~~~~~~~~~l~--~-~~~ 72 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--KGIRLIGISFHSNLELAFKIVKEFNVK------NVAITGDVEFEDSSI--N-VWK 72 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--CSEEEEEEEESSCHHHHHHHHHHHTCC------EEEECSSCCCCCSSS--E-EEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--CCeEEEEEEccCCHHHHHHHHHHcCCC------EEEEccHHHHHHHHH--H-Hcc
Confidence 5899999 899999999999875 459999994333555554433 23210 1110000000 000 0 011
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
.+....++- ...++|+|+.++-.+...+-.-..+++| |+|.+.
T Consensus 73 G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLA 115 (376)
T 3a06_A 73 GSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLA 115 (376)
T ss_dssp STTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEEC
T ss_pred CHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEe
Confidence 111001110 1125899999998787777777888898 455553
No 118
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.60 E-value=0.21 Score=43.14 Aligned_cols=86 Identities=17% Similarity=0.135 Sum_probs=58.4
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEE
Q 015291 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (409)
Q Consensus 86 ~ikVaInGf----GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v 161 (409)
+.+|||+|. |++|+.+++.|.+.. ++|..+|-. . .++. +.|. ++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G---~~v~~vnp~----~---------------------~g~~--i~G~--~~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG---YHVIPVSPK----V---------------------AGKT--LLGQ--QG 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT---CCEEEECSS----S---------------------TTSE--ETTE--EC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC---CEEEEeCCc----c---------------------cccc--cCCe--ec
Confidence 357999997 899999999987654 577777632 0 0111 2342 23
Q ss_pred EecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeC
Q 015291 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 162 ~~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISa 208 (409)
+ .++++++- .+|+|+-|+......+-+...+++|++.+++..
T Consensus 61 ~--~sl~el~~---~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 61 Y--ATLADVPE---KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp C--SSTTTCSS---CCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred c--CCHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 2 45667762 689999999875555556667778999888853
No 119
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.53 E-value=0.023 Score=56.08 Aligned_cols=92 Identities=20% Similarity=0.208 Sum_probs=54.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
+|||.|.|.|.||+.+++.|.+. .++.++.++ .+.+..+-+. . .. +.+ ...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~----~~~~~~~~~~-------~--------~~-------~~~-d~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----NENLEKVKEF-------A--------TP-------LKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----HHHHHHHTTT-------S--------EE-------EEC-CTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC----HHHHHHHhcc-------C--------Cc-------EEE-ecC
Confidence 57999999999999999998754 234443332 2222211110 0 01 111 011
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISa 208 (409)
|++.+.=.-.++|+||.|+|.|....-++..+++|+. +++.
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~--yvD~ 107 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVD--MVDV 107 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCE--EEEC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcc--eEee
Confidence 2221110012689999999999888888899999994 4543
No 120
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=93.46 E-value=0.057 Score=53.75 Aligned_cols=97 Identities=19% Similarity=0.083 Sum_probs=60.4
Q ss_pred eeeEEEEcCCh---hHHHHHHHHHhCCCCCceEEE-EeCCCChhhhhhhh-cccccccccCceEEEecCCeEEECCeEEE
Q 015291 86 KLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIK 160 (409)
Q Consensus 86 ~ikVaInGfGr---IGr~vlr~l~~~~~~~~~vVa-Ind~~~~~~~a~Ll-~yDS~~G~f~~~v~~~~~~~l~v~gk~I~ 160 (409)
++||||+|+|+ ||+..++++... +.++||+ |-|. +.+....+. +|.. +...- +
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~~~g~-----~~~~~--------~------ 69 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRD--NTFVLVAGAFDI-DPIRGSAFGEQLGV-----DSERC--------Y------ 69 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGG--GSEEEEEEECCS-SHHHHHHHHHHTTC-----CGGGB--------C------
T ss_pred cceEEEEcCCccchhHHHHHHHHhhC--CCeEEEEEEeCC-CHHHHHHHHHHhCC-----Cccee--------e------
Confidence 68999999999 999999887654 4589998 7775 333222111 1211 00000 0
Q ss_pred EEecCCCCCCCcc----ccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 161 VVSNRDPLQLPWA----ELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 161 v~~~~~p~~l~W~----~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.+.+++--. +.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 70 ----~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 117 (398)
T 3dty_A 70 ----ADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKP 117 (398)
T ss_dssp ----SSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred ----CCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 011111000 0258999999999999999999999985 5665333
No 121
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=93.42 E-value=0.21 Score=43.07 Aligned_cols=82 Identities=26% Similarity=0.203 Sum_probs=57.4
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 87 ikVaInGf----GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
.+|||+|. |++|+.+++.|.+.. ++|..||-. .+. +.|. +++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G---~~v~~Vnp~---------------------------~~~--i~G~--~~y 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG---YDVYPVNPK---------------------------YEE--VLGR--KCY 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT---------------------------CSE--ETTE--ECB
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC---CEEEEECCC---------------------------CCe--ECCe--ecc
Confidence 57999997 799999999988764 577777631 011 2332 232
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
.++++++- .+|+|+-++......+-+...+++|++.++++
T Consensus 69 --~sl~~l~~---~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~ 108 (144)
T 2d59_A 69 --PSVLDIPD---KIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQ 108 (144)
T ss_dssp --SSGGGCSS---CCSEEEECSCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred --CCHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEC
Confidence 34555652 68999999987666666667778999987775
No 122
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.29 E-value=0.18 Score=43.36 Aligned_cols=86 Identities=17% Similarity=0.069 Sum_probs=59.2
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 87 ikVaInGf----GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
-+|||+|. |++|+.+++.|.+.. ++|..||-. . .++. +.|. +++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G---~~v~~vnp~----~---------------------~~~~--i~G~--~~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG---YRVLPVNPR----F---------------------QGEE--LFGE--EAV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT---CEEEEECGG----G---------------------TTSE--ETTE--ECB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC---CEEEEeCCC----c---------------------ccCc--CCCE--Eec
Confidence 47999996 899999999988765 577777631 0 0111 2342 232
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISap 209 (409)
.++++++- .+|+|+-++......+-+....++|+|.++++..
T Consensus 62 --~sl~el~~---~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 --ASLLDLKE---PVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp --SSGGGCCS---CCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred --CCHHHCCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 34555652 6899999988766666677778899998888653
No 123
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.29 E-value=0.18 Score=47.39 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=27.4
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|++||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 567999999 9999999999999864 58877764
No 124
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=93.19 E-value=0.21 Score=42.35 Aligned_cols=81 Identities=16% Similarity=0.079 Sum_probs=60.3
Q ss_pred eEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 88 KVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 88 kVaInGf----GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
+|||+|. |++|..+++.|.+.. ++|..||-. ++. +.|.+ ++
T Consensus 6 siAVVGaS~~~~~~g~~v~~~L~~~g---~~V~pVnP~-----------~~~------------------i~G~~--~y- 50 (122)
T 3ff4_A 6 KTLILGATPETNRYAYLAAERLKSHG---HEFIPVGRK-----------KGE------------------VLGKT--II- 50 (122)
T ss_dssp CEEEETCCSCTTSHHHHHHHHHHHHT---CCEEEESSS-----------CSE------------------ETTEE--CB-
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHCC---CeEEEECCC-----------CCc------------------CCCee--cc-
Confidence 6999993 899999999998764 588888842 111 33422 21
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeC
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISa 208 (409)
.+..++| . +|+|+-++......+..+...+.|+|.|+++.
T Consensus 51 -~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~ 90 (122)
T 3ff4_A 51 -NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNP 90 (122)
T ss_dssp -CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECT
T ss_pred -CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECC
Confidence 4567777 3 89999999887777888888889999877764
No 125
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=92.97 E-value=0.42 Score=49.51 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=66.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC---------CChhhhhhhhcccccc-cccCceEEEecCCeEEECC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLL-GTFKADVKIVDNETISVDG 156 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~---------~~~~~~a~Ll~yDS~~-G~f~~~v~~~~~~~l~v~g 156 (409)
.+|+|-|||-||..+++.|.+.. -.||+|.|. .+.+.+..|+++-..+ |+...- .+. +.|
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~----~~~---~~~ 322 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHLN---VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEY----LNH---SST 322 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTT---CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGG----GGT---CSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHH----Hhh---cCC
Confidence 58999999999999999998864 599999985 3455566666432221 322210 000 001
Q ss_pred eEEEEEecCCCCCCCccccCccEEEeCC-CCCCChhhHHHHHHcCCCEEEE
Q 015291 157 KLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 157 k~I~v~~~~~p~~l~W~~~gvDiVle~T-G~f~s~e~a~~hl~aGakkVVI 206 (409)
- +.. +++++ | ...+||.+-|+ +..++.+.+...++.+|| +|+
T Consensus 323 a--~~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 323 A--KYF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp C--EEC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred c--EEe---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 1 111 12333 7 46899999987 778899999998888886 444
No 126
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.84 E-value=0.21 Score=40.96 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=24.7
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.|.|.+|+.+++.|.+.. .+|+.+..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g---~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMG---HEVLAVDI 37 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT---CCCEEEES
T ss_pred cEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 6999999999999999998764 46666654
No 127
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.84 E-value=0.12 Score=43.73 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=29.2
Q ss_pred ccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 83 ~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..|+-+|.|.|+|++|+.+++.|.++. .+|++|..
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 38 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASD---IPLVVIET 38 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 445668999999999999999998764 68888865
No 128
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=92.62 E-value=0.16 Score=49.02 Aligned_cols=87 Identities=20% Similarity=0.083 Sum_probs=57.3
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInGf-GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
.+||+|.|+ |++|+..++.+.+.. +++|+.-++.. .++. +.| ++++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g---~~~V~~V~p~~------------------------~g~~--~~G--~~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYG---TKMVGGVTPGK------------------------GGTT--HLG--LPVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTTC------------------------TTCE--ETT--EEEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCCc------------------------ccce--eCC--eecc--
Confidence 469999995 999999999887653 57664433310 0011 223 2333
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
.+.++++- +.++|+|+.++......+.+...+++|.+.+|+
T Consensus 54 ~sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22333321 126899999999988888889999999987554
No 129
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.37 E-value=0.27 Score=43.28 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=26.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEc
Confidence 4899999 9999999999999874 58887765
No 130
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=92.32 E-value=0.19 Score=47.38 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=26.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 36 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYAR 36 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEEC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEEC
Confidence 46899999 9999999999999864 57776654
No 131
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.29 E-value=0.19 Score=47.08 Aligned_cols=31 Identities=23% Similarity=0.224 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 36 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG---HPTYVLFR 36 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEEC
Confidence 5899999 9999999999998864 57777754
No 132
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.14 E-value=0.1 Score=48.48 Aligned_cols=32 Identities=9% Similarity=0.145 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~--g~~V~~~~R 33 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANH--IDHFHIGVR 33 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT--CTTEEEEES
T ss_pred CEEEEEcCCchHHHHHHHHHhhCC--CCcEEEEEC
Confidence 4799999 9999999999988752 257777765
No 133
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=91.97 E-value=0.19 Score=47.37 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=26.7
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+.||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R 43 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTR 43 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC---CcEEEEEC
Confidence 444899999 9999999999998864 57776654
No 134
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.73 E-value=0.18 Score=44.96 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG---FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEc
Confidence 5899999 9999999999999764 58877754
No 135
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.71 E-value=0.19 Score=43.64 Aligned_cols=31 Identities=29% Similarity=0.255 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEe
Confidence 5899999 8999999999998864 57777754
No 136
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=91.23 E-value=0.21 Score=47.85 Aligned_cols=101 Identities=19% Similarity=0.141 Sum_probs=55.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCC--ChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSG--GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~--~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
++||.|.| +|.||+.+++.|.++. .+|+++.... ..+....+-.... .+-.+ + ..
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~l~~------------~~v~~-~-----~~- 67 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH---RPTYILARPGPRSPSKAKIFKALED------------KGAII-V-----YG- 67 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEECSSCCCHHHHHHHHHHHH------------TTCEE-E-----EC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CCEEEEECCCCCChhHHHHHHHHHh------------CCcEE-E-----Ee-
Confidence 46899999 8999999999998764 5777776532 2222221111100 01001 0 00
Q ss_pred ecCCCCCCCc--cccCccEEEeCCCCCC---ChhhHHHHHHcC-CCEEEEeC
Q 015291 163 SNRDPLQLPW--AELGIDIVIEGTGVFV---DGPGAGKHIQAG-AKKVIITA 208 (409)
Q Consensus 163 ~~~~p~~l~W--~~~gvDiVle~TG~f~---s~e~a~~hl~aG-akkVVISa 208 (409)
.-.|++.+.. .+.++|+||.++|... ...-+....++| ++++|.|.
T Consensus 68 Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~ 119 (346)
T 3i6i_A 68 LINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSE 119 (346)
T ss_dssp CTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSC
T ss_pred ecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecc
Confidence 0112222221 2228999999998631 223444555688 99887653
No 137
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.08 E-value=1.5 Score=39.31 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=27.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG---HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC---CeEEEEEC
Confidence 46899999 8999999999999874 58877764
No 138
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.21 E-value=0.32 Score=45.29 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=25.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R 36 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG---HPTFLLVR 36 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEEC
Confidence 5899999 8999999999998864 57766654
No 139
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=90.14 E-value=0.44 Score=42.46 Aligned_cols=31 Identities=13% Similarity=0.244 Sum_probs=25.4
Q ss_pred ee-EEEEc-CChhHHHHHHHHH-hCCCCCceEEEEeC
Q 015291 87 LK-VAING-FGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (409)
Q Consensus 87 ik-VaInG-fGrIGr~vlr~l~-~~~~~~~~vVaInd 120 (409)
|| |.|.| .|.||+.+++.|. ++. .+|+++..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r 38 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTD---MHITLYGR 38 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEES
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEec
Confidence 45 99999 9999999999998 554 58877754
No 140
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.04 E-value=0.89 Score=43.59 Aligned_cols=32 Identities=31% Similarity=0.287 Sum_probs=25.3
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+|||+|.|.|.||..+...|. .. .+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g---~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY---HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC---CceEEEEC
Confidence 6689999999999999998887 53 46666654
No 141
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=89.45 E-value=0.6 Score=46.84 Aligned_cols=156 Identities=11% Similarity=0.092 Sum_probs=76.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEEeCCCChhhhhhhhc-ccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~--~vVaInd~~~~~~~a~Ll~-yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
+||+|.|.|.||+.+++.|.++. ++ +|+ +.+. +.+.+..+.+ +.. .. +..+. .+.+ .
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g--~~~~~V~-v~~r-~~~~~~~la~~l~~---~~--------~~~~~----~~~~-D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNR--EVFSHIT-LASR-TLSKCQEIAQSIKA---KG--------YGEID----ITTV-D 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCT--TTCCEEE-EEES-CHHHHHHHHHHHHH---TT--------CCCCE----EEEC-C
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCceEEE-EEEC-CHHHHHHHHHHhhh---hc--------CCceE----EEEe-c
Confidence 58999999999999999998763 34 444 4333 2222211211 110 00 00010 0110 0
Q ss_pred cCCCCCCC--ccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCcc---ccCcCCCcEEecC
Q 015291 164 NRDPLQLP--WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEK---DYDHEVANIVSNA 238 (409)
Q Consensus 164 ~~~p~~l~--W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~---~~~~~~~~IISna 238 (409)
..+++++. ..+.++|+||.|+|.+.....+...+++|+.-+.++.... ++...+.++.-.+ ........++.+.
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~-~~~~~~~~~~~~~l~~~a~~aG~~~i~g~ 140 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEH-PDLAKFEYKEQWAFHDRYKEKGVMALLGS 140 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBC-TTCSCBCSHHHHTTHHHHHHHTCEEEECC
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCC-cccchhhhHHHHHHHHHHHHhCCEEEEcC
Confidence 01111111 1112489999999998877778888999986332322111 1111111111001 1111114577777
Q ss_pred CcchhhhHHHHHHHHhh-cC-ccEEEe
Q 015291 239 SCTTNCLAPFVKVMDEE-LG-IVKGAM 263 (409)
Q Consensus 239 SCTTn~Lapvlk~L~~~-fG-I~~~~m 263 (409)
+|--.....++..+.++ |+ |+++.+
T Consensus 141 G~~PG~~~l~a~~~~~~~~~~i~~i~i 167 (405)
T 4ina_A 141 GFDPGVTNVFCAYAQKHYFDEIHEIDI 167 (405)
T ss_dssp BTTTBHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCccHHHHHHHHHHHhccCcccEEEE
Confidence 77655555555555553 65 565655
No 142
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=89.38 E-value=0.66 Score=47.32 Aligned_cols=95 Identities=26% Similarity=0.376 Sum_probs=57.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHh-CCCCCceEEEEeCCC---------ChhhhhhhhcccccccccCceEEEecCCeEEEC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHG-RKDSPLDVVVVNDSG---------GVKNASHLLKYDSLLGTFKADVKIVDNETISVD 155 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~-~~~~~~~vVaInd~~---------~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~ 155 (409)
..+|+|-|||-||+.+++.|.+ .. ..||+|.|.. +++.+ ++|--.+|++.. + .+
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~G---akvVavsD~~G~i~dp~Gld~~~l---~~~~~~~g~l~~---y-~~------ 272 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELG---SKVVAVSDSRGGIYNPEGFDVEEL---IRYKKEHGTVVT---Y-PK------ 272 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEEECSSCEEECTTCCCHHHH---HHHHHHSSCSTT---C-SS------
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcC---CEEEEEEeCCCeEECCCCCCHHHH---HHHHHhhCCccc---C-CC------
Confidence 3689999999999999999988 53 7999999862 33322 222222333211 0 00
Q ss_pred CeEEEEEecCCCCCCCccccCccEEEeCC-CCCCChhhHHHHHHcCCCEEEEeC
Q 015291 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 156 gk~I~v~~~~~p~~l~W~~~gvDiVle~T-G~f~s~e~a~~hl~aGakkVVISa 208 (409)
.+.+ +++++ |. ..+|+++.|+ +..++.+.+.. -+|| +|+-+
T Consensus 273 a~~~------~~~ei-l~-~~~DIliP~A~~n~i~~~~a~~---l~ak-~V~Eg 314 (415)
T 2tmg_A 273 GERI------TNEEL-LE-LDVDILVPAALEGAIHAGNAER---IKAK-AVVEG 314 (415)
T ss_dssp SEEE------CHHHH-TT-CSCSEEEECSSTTSBCHHHHTT---CCCS-EEECC
T ss_pred ceEc------Cchhh-hc-CCCcEEEecCCcCccCcccHHH---cCCe-EEEeC
Confidence 1111 12222 53 5899999997 66777776654 3664 45543
No 143
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=89.14 E-value=0.32 Score=48.25 Aligned_cols=31 Identities=32% Similarity=0.432 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFG---LAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999988543 78877764
No 144
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.06 E-value=0.46 Score=38.76 Aligned_cols=31 Identities=23% Similarity=0.539 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||+|.|+|.+|+.+++.|.+.. .+|+.+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g---~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG---HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998764 57777754
No 145
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=88.99 E-value=0.31 Score=47.66 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G---~~V~~~dr 170 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWG---FPLRCWSR 170 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTT---CCEEEEES
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 358999999999999999987643 68877764
No 146
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=88.96 E-value=0.33 Score=47.84 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=26.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~G---~~V~~~d~ 172 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAFG---MKVLCYDV 172 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CceEEEECcCHHHHHHHHHHHHCc---CEEEEECC
Confidence 458999999999999999998653 78877764
No 147
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=88.90 E-value=0.39 Score=44.70 Aligned_cols=31 Identities=23% Similarity=0.195 Sum_probs=25.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG---NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT---CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC---CcEEEEEC
Confidence 4899999 8999999999998764 46666654
No 148
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.88 E-value=0.34 Score=45.55 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=25.0
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|+|||+|.|+|.+|+.+.+.|.... .+|..++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 35 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAG---YSLVVSD 35 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred ccceEEEECchHHHHHHHHHHHhCC---CEEEEEe
Confidence 5679999999999999999998753 5766554
No 149
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.78 E-value=0.41 Score=39.85 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|.|.|+|++|+.+++.|.++. .+|+++..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g---~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG---KKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 48999999999999999998764 58887764
No 150
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.65 E-value=0.4 Score=43.63 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=26.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
++||+|.|.|.+|+.+++.|.+.. .+|+.+.+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g---~~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ---IPAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT---CCEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEECC
Confidence 479999999999999999998754 577764554
No 151
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=88.57 E-value=0.39 Score=47.20 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=26.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~G---~~V~~~dr 168 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASALG---MHVIGVNT 168 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECcCHHHHHHHHHHHhCC---CEEEEECC
Confidence 358999999999999999998653 78887764
No 152
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=88.56 E-value=0.37 Score=46.72 Aligned_cols=31 Identities=26% Similarity=0.252 Sum_probs=25.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d 154 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALG---AQVRGFS 154 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEEC
Confidence 358999999999999999988653 6776655
No 153
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=88.47 E-value=0.46 Score=45.78 Aligned_cols=85 Identities=18% Similarity=0.121 Sum_probs=55.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEE-EEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vV-aInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+||+|.| .|+.|+.+++.+.+.. ++++ .||.. . .++. +.| ++++
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~g---~~~v~~VnP~-~------------------------~g~~--i~G--~~vy-- 53 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTYG---TKIVAGVTPG-K------------------------GGME--VLG--VPVY-- 53 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTT-C------------------------TTCE--ETT--EEEE--
T ss_pred CEEEEECCCCCHHHHHHHHHHHcC---CeEEEEECCC-C------------------------CCce--ECC--EEee--
Confidence 6899999 5999999999887653 5665 45521 0 0011 233 2333
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
.+.++++- +.++|+++.++......+.+...+++|.+.+|+
T Consensus 54 ~sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 54 DTVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp SSHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22333321 126899999998887778888888999986665
No 154
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=88.45 E-value=0.39 Score=47.34 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|||+|||+||+.+.+.+.... ++|++.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg---~~v~~~d 171 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFG---MKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred cEEEEECcchHHHHHHHhhcccC---ceeeecC
Confidence 47999999999999999987653 7887664
No 155
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=88.44 E-value=0.42 Score=43.31 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=26.8
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+.+|.|.| .|.||+.+++.|.++. ..+|+++..
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G--~~~V~~~~R 56 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQ--TIKQTLFAR 56 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT--TEEEEEEES
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCC--CceEEEEEc
Confidence 346899999 9999999999998763 257776654
No 156
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.39 E-value=0.39 Score=47.24 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=26.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 171 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFG---MKVLGVSR 171 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred cceEEEEEECHHHHHHHHHHHhCC---CEEEEEcC
Confidence 358999999999999999997653 78887764
No 157
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=88.29 E-value=0.39 Score=47.08 Aligned_cols=32 Identities=31% Similarity=0.489 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.+.... ++|++.+.
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMG---ATVIGEDV 177 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999988653 68776653
No 158
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.12 E-value=0.41 Score=47.43 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G---~~V~~~d~ 179 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMG---AKVIAYDV 179 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCeEEEEecCHHHHHHHHHHhhCC---CEEEEECC
Confidence 358999999999999999988653 78887764
No 159
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=88.00 E-value=0.43 Score=46.87 Aligned_cols=32 Identities=22% Similarity=0.426 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.+.... ++|++.+.
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 176 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGFG---AKVIAYDP 176 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999988653 68776653
No 160
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=88.00 E-value=0.42 Score=47.47 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=26.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~d~ 191 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFG---MNVLVWGR 191 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHhCC---CEEEEECC
Confidence 358999999999999999987653 78887764
No 161
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.95 E-value=0.41 Score=44.16 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=25.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCC-CCceEEEEe
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~-~~~~vVaIn 119 (409)
|++||+|+|+|.+|+.+.+.|.+... +.-+|...+
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~ 36 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSD 36 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEEC
T ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEe
Confidence 45799999999999999999987631 111665554
No 162
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=87.93 E-value=0.9 Score=46.82 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=65.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC---------C-Chhhhhhhhcccccc-cccCceEEEecCCeEEEC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------G-GVKNASHLLKYDSLL-GTFKADVKIVDNETISVD 155 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~---------~-~~~~~a~Ll~yDS~~-G~f~~~v~~~~~~~l~v~ 155 (409)
.+|+|-|||-+|..+++.|.+.. ..||+|.|. . +++.+..|++|-..+ |.+..- .+ . ++
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y----~~-~--~~ 300 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELG---AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY----AD-K--FG 300 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHT---CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHH----HH-H--HT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhc----cc-c--cC
Confidence 58999999999999999998764 699999884 1 333445555432221 222110 00 0 01
Q ss_pred CeEEEEEecCCCCCCCccccCccEEEeCC-CCCCChhhHHHHHHcCCCEEEE
Q 015291 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 156 gk~I~v~~~~~p~~l~W~~~gvDiVle~T-G~f~s~e~a~~hl~aGakkVVI 206 (409)
.+.+ . ++++ | ...+|+.+-|+ +..++.+.+......||| +|+
T Consensus 301 a~~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~ 343 (449)
T 1bgv_A 301 VQFF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVK-YYI 343 (449)
T ss_dssp CEEE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred CEEe---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCe-EEE
Confidence 1222 1 2233 7 46899999987 778899999988878986 445
No 163
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=87.89 E-value=0.76 Score=43.59 Aligned_cols=35 Identities=17% Similarity=0.363 Sum_probs=28.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
++||.|.| +|.||+.+++.|.++. ..++|+++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~~~ 59 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSY-ETYKIINFDAL 59 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHC-TTEEEEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 46899999 8999999999998763 34788888653
No 164
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=87.80 E-value=0.45 Score=46.93 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~G---~~V~~~d~ 196 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSFG---MKTIGYDP 196 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred cCEEEEEeECHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999987543 78887764
No 165
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=87.69 E-value=0.41 Score=47.60 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~G---~~V~~~dr 195 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPFG---CNLLYHDR 195 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGC---CEEEEECS
T ss_pred CCEEeEEEeCHHHHHHHHHHHHCC---CEEEEeCC
Confidence 358999999999999999987643 68777764
No 166
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=87.55 E-value=0.51 Score=48.11 Aligned_cols=32 Identities=31% Similarity=0.489 Sum_probs=28.6
Q ss_pred eeEEEEcCChhHHHHHHHHHh-CCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHG-RKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~-~~~~~~~vVaInd~ 121 (409)
.+|+|.|||+||+.+++.|.+ .. ++|++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~G---~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDFG---MKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---CEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhcC---CEEEEEeCC
Confidence 479999999999999999987 54 799999886
No 167
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=87.40 E-value=0.49 Score=46.90 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~G---~~V~~~d~ 199 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAFG---FNVLFYDP 199 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECT
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999988643 68877653
No 168
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=87.36 E-value=0.38 Score=47.28 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G---~~V~~~d~ 176 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWG---ATLQYHEA 176 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSC---CEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999876543 78877764
No 169
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=87.34 E-value=0.5 Score=46.07 Aligned_cols=32 Identities=25% Similarity=0.493 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGFD---MDIDYFDT 177 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999987543 78887764
No 170
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=87.25 E-value=0.45 Score=47.63 Aligned_cols=32 Identities=25% Similarity=0.515 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.+.... ++|++.+.
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~fG---~~V~~~d~ 207 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGFR---ARIRVFDP 207 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTSC---CEEEEECS
T ss_pred CCEEEEecCCcccHHHHHhhhhCC---CEEEEECC
Confidence 358999999999999999886542 78877764
No 171
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=87.24 E-value=0.5 Score=46.76 Aligned_cols=32 Identities=22% Similarity=0.322 Sum_probs=25.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.+.... ++|++.+.
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 202 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAFG---MSVRYWNR 202 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 358999999999999999987543 68766653
No 172
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.22 E-value=0.41 Score=46.32 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFG---MRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhhC---cEEEEEec
Confidence 58999999999999999987643 68877764
No 173
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.18 E-value=0.52 Score=45.83 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=25.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~ 175 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFG---MRVVYHAR 175 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999988653 67766653
No 174
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=87.12 E-value=1.4 Score=45.30 Aligned_cols=95 Identities=21% Similarity=0.407 Sum_probs=57.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCC---------ChhhhhhhhcccccccccCceEEEecCCeEEECC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG---------GVKNASHLLKYDSLLGTFKADVKIVDNETISVDG 156 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~---------~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~g 156 (409)
..||+|-|||-||+.+++.|.+.. ..||+|.|.. +++. |+++--.+|++.. + .+ .
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~G---akvVavsD~~G~i~dp~Gld~~~---l~~~~~~~g~i~~---y-~~------a 298 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHG---ARVVAVQDHTGTVYNEAGIDPYD---LLRHVQEFGGVRG---Y-PK------A 298 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECSSCEEECTTCCCHHH---HHHHHHHTSSSTT---C-TT------S
T ss_pred CCEEEEeccCHHHHHHHHHHHHCC---CEEEEEEcCCcEEECCCCCCHHH---HHHHHHhcCCccc---C-CC------c
Confidence 358999999999999999999874 6999999862 3333 3322122332211 0 00 1
Q ss_pred eEEEEEecCCCCCCCccccCccEEEeCC-CCCCChhhHHHHHHcCCCEEEEeC
Q 015291 157 KLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 157 k~I~v~~~~~p~~l~W~~~gvDiVle~T-G~f~s~e~a~~hl~aGakkVVISa 208 (409)
+.+ +++++ |. ..+|+++.|+ +..++.+.|... +|| +|+-+
T Consensus 299 ~~i------~~~ei-~~-~~~DIlvPcA~~n~i~~~na~~l---~ak-~VvEg 339 (440)
T 3aog_A 299 EPL------PAADF-WG-LPVEFLVPAALEKQITEQNAWRI---RAR-IVAEG 339 (440)
T ss_dssp EEC------CHHHH-TT-CCCSEEEECSSSSCBCTTTGGGC---CCS-EEECC
T ss_pred eEc------Cchhh-hc-CCCcEEEecCCcCccchhhHHHc---CCc-EEEec
Confidence 111 11222 64 5799999997 556677776653 664 45543
No 175
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=87.10 E-value=5.1 Score=37.82 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=26.8
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 45899999 8999999999998764 58887754
No 176
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=87.05 E-value=0.89 Score=42.82 Aligned_cols=161 Identities=19% Similarity=0.211 Sum_probs=89.7
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
.||-.|+| +||.||.+.+++.. ++++||+.=|. .+.
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~---~~~elv~~id~---------------------------~~~------------- 48 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSE---KGHELVLKVDV---------------------------NGV------------- 48 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TTCEEEEEEET---------------------------TEE-------------
T ss_pred cceeEEEEecCHHHHHHHHHHhC---CCCEEEEEEcC---------------------------CCc-------------
Confidence 46899999 79999999887643 34788765331 000
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEecCCccccCcCCCcEEecCCcc--h
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCT--T 242 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISaps~~~dvP~vV~gVN~~~~~~~~~~IISnaSCT--T 242 (409)
+++ . +.|+|||=|-.....+.++..++.|.+ +||-....+++..-.+ +.+... ..++-+||=+ .
T Consensus 49 ---~~l--~--~~DVvIDFT~P~a~~~~~~~~~~~g~~-~ViGTTG~~~~~~~~l-----~~~a~~-~~vv~apNfSlGv 114 (228)
T 1vm6_A 49 ---EEL--D--SPDVVIDFSSPEALPKTVDLCKKYRAG-LVLGTTALKEEHLQML-----RELSKE-VPVVQAYNFSIGI 114 (228)
T ss_dssp ---EEC--S--CCSEEEECSCGGGHHHHHHHHHHHTCE-EEECCCSCCHHHHHHH-----HHHTTT-SEEEECSCCCHHH
T ss_pred ---ccc--c--CCCEEEECCCHHHHHHHHHHHHHcCCC-EEEeCCCCCHHHHHHH-----HHHHhh-CCEEEeccccHHH
Confidence 011 1 469999877767777888888888885 4442211110100000 011112 4555444443 4
Q ss_pred hhhHHHHHHHHhhcCccEEEeeeeeccccccccccccchhhhhhhccccceecCCCchHHHHHHHccccCCCeeEEEEec
Q 015291 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRV 322 (409)
Q Consensus 243 n~Lapvlk~L~~~fGI~~~~mTTiha~Tg~Q~llD~~~~d~r~~Raaa~NIIP~~tGaakav~kVlPeL~gkl~g~avRV 322 (409)
|-|.-+++.+-+.|.==.+.|.-.|-- ++ +|. | .|.|..+.+.++ +.+.-.++|.
T Consensus 115 nll~~l~~~aA~~l~~ydiEIiE~HH~---~K-~DA----------------P--SGTAl~lae~i~---~~I~i~svR~ 169 (228)
T 1vm6_A 115 NVLKRFLSELVKVLEDWDVEIVETHHR---FK-KDA----------------P--SGTAILLESALG---KSVPIHSLRV 169 (228)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEEEECT---TC-CCS----------------S--CHHHHHHHHHTT---SCCCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEcCCC---CC-CCC----------------C--CHHHHHHHHhcc---cCCCEEEEEC
Confidence 555555555555552012334444432 22 343 2 466667777774 3577789999
Q ss_pred Ccccee
Q 015291 323 PTPNVS 328 (409)
Q Consensus 323 Pv~~gs 328 (409)
|-..++
T Consensus 170 g~ivg~ 175 (228)
T 1vm6_A 170 GGVPGD 175 (228)
T ss_dssp TTCCCE
T ss_pred CCCcEE
Confidence 987775
No 177
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.03 E-value=0.44 Score=42.91 Aligned_cols=31 Identities=32% Similarity=0.381 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.|+|++|+.+++.|.++. .+++.|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g---~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK---YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998764 58888864
No 178
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.02 E-value=0.56 Score=43.93 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=25.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+|||+|.|.|.+|..+...|.+.. .+|..++.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG---NDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC---CcEEEEEC
Confidence 4579999999999999999998754 47776654
No 179
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.87 E-value=0.64 Score=39.45 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
-+|.|.|+|++|+.+++.|.++. .+|+.|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g---~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG---QNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 47999999999999999998764 57887864
No 180
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=86.74 E-value=0.57 Score=45.41 Aligned_cols=32 Identities=22% Similarity=0.454 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 173 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALG---MNILLYDP 173 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CceEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999988653 68877764
No 181
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=86.38 E-value=0.6 Score=45.76 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.+.... ++|++.+.
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGFG---AKVITYDI 177 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999988653 68877764
No 182
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=86.32 E-value=0.62 Score=45.29 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~ 173 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMG---MKVLAYDI 173 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999988653 68877764
No 183
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=86.23 E-value=0.6 Score=46.98 Aligned_cols=31 Identities=19% Similarity=0.418 Sum_probs=25.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~d 146 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLG---WKVLVCD 146 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 358999999999999999988653 6876654
No 184
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=86.13 E-value=0.61 Score=46.99 Aligned_cols=30 Identities=13% Similarity=0.334 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|||+|+|+||+.+.+.|.... ++|++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G---~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALG---IRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC---CEEEEEC
Confidence 58999999999999999998653 6877664
No 185
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=86.04 E-value=1.6 Score=45.13 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=62.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC---------CChhhhhhhhcccccc-cccCceEEEecCCeEEECC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLL-GTFKADVKIVDNETISVDG 156 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~---------~~~~~~a~Ll~yDS~~-G~f~~~v~~~~~~~l~v~g 156 (409)
.+|+|-|||-||...++.|.+.. -.||+|.|. .+.+.+..+.++...+ ++...-+. +. .+.
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~---~~---~~a 310 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEKG---AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLK---YS---KTA 310 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGG---TC---SSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhh---cC---CCc
Confidence 58999999999999999998764 478888884 2444554443322221 11110000 00 011
Q ss_pred eEEEEEecCCCCCCCccccCccEEEeCC-CCCCChhhHHHHHHcCCCEEEE
Q 015291 157 KLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 157 k~I~v~~~~~p~~l~W~~~gvDiVle~T-G~f~s~e~a~~hl~aGakkVVI 206 (409)
+ .. ++++ .|. ..+||.+=|+ +.-++.+.++.-++.+|| +|+
T Consensus 311 ~---~v---~~~~-i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 311 K---YF---ENQK-PWN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp E---EE---CSCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred e---Ee---CCcc-ccc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 1 11 1233 274 5799999985 778898999887777885 455
No 186
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=85.85 E-value=0.67 Score=45.72 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHH-hCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~-~~~~~~~~vVaInd 120 (409)
.+|||+|+|+||+.+.+.+. ... ++|++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G---~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG---MKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC---CEEEEECC
Confidence 48999999999999999987 643 68777654
No 187
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.78 E-value=0.7 Score=43.44 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.8
Q ss_pred ceeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGf-GrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|++||+|+|. |.+|+.+.+.|.... .+|+.++.
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~r 43 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSA---HHLAAIEI 43 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSS---SEEEEECC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 4479999998 999999999998754 57776653
No 188
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=85.71 E-value=0.66 Score=46.94 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.+.... ++|++.+.
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~G---~~V~~~d~ 176 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESLG---MYVYFYDI 176 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC---CEEEEEcC
Confidence 348999999999999999988653 78877653
No 189
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.69 E-value=0.37 Score=46.60 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=25.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
|++||+|.|.|.+|..++..|.... .++ +.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g--~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKE--LGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CCe-EEEEeC
Confidence 4579999999999999998887653 246 444454
No 190
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.40 E-value=0.73 Score=44.64 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=26.8
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|.+||+|+|+|.||+.+.+.|..... ..+|++.+.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr 66 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDI 66 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEEC
Confidence 34699999999999999999987641 127776653
No 191
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=85.28 E-value=0.65 Score=45.67 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=24.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
..+|||+|+|+||+.+.+.|.... ++|.+.+
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G---~~V~~~d 194 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFD---CPISYFS 194 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEC
Confidence 348999999999999999988643 5766554
No 192
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.23 E-value=0.74 Score=41.74 Aligned_cols=32 Identities=31% Similarity=0.351 Sum_probs=25.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+||+|.|+|.+|+.+++.|.... .+|++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g---~~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG---FKVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 468999999999999999998753 46766654
No 193
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=85.15 E-value=0.93 Score=38.55 Aligned_cols=31 Identities=29% Similarity=0.345 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|.|.|+|+||+.+++.|..+. .+|+++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g---~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG---HSVVVVDK 50 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998764 58877764
No 194
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=85.14 E-value=0.66 Score=45.27 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.++|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~ 186 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFG---VQRFLYTG 186 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT---CCEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999987653 67777663
No 195
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=85.06 E-value=0.76 Score=44.94 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.++|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~ 181 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFN---MRILYYSR 181 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC---CEEEEECC
Confidence 358999999999999999998653 68877764
No 196
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=84.96 E-value=0.67 Score=46.82 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G---~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFD---VHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT---CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC---CEEEEEcC
Confidence 58999999999999999987543 78877764
No 197
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=84.74 E-value=0.73 Score=42.92 Aligned_cols=32 Identities=25% Similarity=0.248 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~R 38 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDG--TFKVRVVTR 38 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--SSEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhcC--CceEEEEEc
Confidence 5899999 8999999999998753 257877764
No 198
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=84.69 E-value=0.83 Score=43.44 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=26.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|++||+|+|+|.+|+.+.+.|.+.. .+|+..+.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG---LSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 4579999999999999999998764 58777753
No 199
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=84.68 E-value=1.3 Score=45.53 Aligned_cols=101 Identities=20% Similarity=0.264 Sum_probs=63.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC---------CChhhhhhhhcc-cccccccCceEEEecCCeEEECC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKY-DSLLGTFKADVKIVDNETISVDG 156 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~---------~~~~~~a~Ll~y-DS~~G~f~~~v~~~~~~~l~v~g 156 (409)
.||+|=|||-||..+++.|.+.. -.||++.|. .+.+.+..|++. .+..|+...-.+ . ++.
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~--~-----~g~ 305 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEFG---ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAK--E-----FGL 305 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHH--H-----HTC
T ss_pred CEEEEeCCChHHHHHHHHHHhcC---CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccc--c-----CCc
Confidence 58999999999999999999875 589988764 244555555431 222222110000 0 111
Q ss_pred eEEEEEecCCCCCCCccccCccEEEeCC-CCCCChhhHHHHHHcCCCEEEE
Q 015291 157 KLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 157 k~I~v~~~~~p~~l~W~~~gvDiVle~T-G~f~s~e~a~~hl~aGakkVVI 206 (409)
+ ... +++ .|. ..+||.+=|+ +.-++.+.++.-.+.||| +|+
T Consensus 306 ~---~~~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k-~Ia 347 (450)
T 4fcc_A 306 V---YLE---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVK-AVA 347 (450)
T ss_dssp E---EEE---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred E---Eec---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCce-EEe
Confidence 1 111 222 265 5899999886 778899999887777885 344
No 200
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.60 E-value=0.73 Score=45.15 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G---~~V~~~d~ 177 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFG---VKLYYWSR 177 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT---CEEEEECS
T ss_pred cCEEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999987643 68776654
No 201
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=84.54 E-value=0.62 Score=43.57 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=25.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+|||+|+|+|.+|+.+.+.|.... .+|+.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAG---HQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTT---CEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC---CEEEEEc
Confidence 369999999999999999988653 5776665
No 202
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=84.40 E-value=0.81 Score=42.14 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=27.3
Q ss_pred cceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 84 VAKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 84 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.|+|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 37 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPEE---YDIYPFDK 37 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTTT---EEEEEECT
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhCC---CEEEEecc
Confidence 3667999999 9999999999998763 68888753
No 203
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=84.37 E-value=1.1 Score=43.31 Aligned_cols=86 Identities=17% Similarity=0.172 Sum_probs=56.0
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEE-EEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vV-aInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
+.||+|.| .|+.|+.+++.+.+.. +++| .|| +.. .++. +.| ++++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g---~~~V~~Vn-P~~------------------------~g~~--i~G--~~vy- 59 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECG---TKIVGGVT-PGK------------------------GGQN--VHG--VPVF- 59 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTT---CCEEEEEC-TTC------------------------TTCE--ETT--EEEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC---CeEEEEeC-CCC------------------------CCce--ECC--Eeee-
Confidence 46899999 5999999999988754 4544 555 310 0111 233 2333
Q ss_pred cCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 164 ~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
.+.++++- +.++|+++.++......+.+...+++|.+.+|+
T Consensus 60 -~sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 60 -DTVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp -SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -CCHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 23333331 126899999998887778888888999986555
No 204
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.10 E-value=0.76 Score=40.02 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=26.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-CCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR-KDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~-~~~~~~vVaInd 120 (409)
..+|.|.|+|++|+.+++.|.+. . .+|+++..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG---KISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC---SCEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC---CeEEEEEC
Confidence 45899999999999999999865 4 57888865
No 205
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=83.84 E-value=0.97 Score=43.64 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=27.6
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 84 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.|++||||+|+|.+|..+.+.|.+.. ..+|.+.+.
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G--~~~V~~~dr 56 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRN--AARLAAYDL 56 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTT--CSEEEEECG
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcC--CCeEEEEeC
Confidence 36689999999999999999998653 147776653
No 206
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=83.81 E-value=1.4 Score=42.49 Aligned_cols=86 Identities=21% Similarity=0.206 Sum_probs=56.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEE-EEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vV-aInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
+.||+|.| .|+.|+.+++.+.+.. +++| .|| +.. .++. +.| ++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g---~~~v~~Vn-P~~------------------------~g~~--i~G--~~vy- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYG---TKVVAGVT-PGK------------------------GGSE--VHG--VPVY- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEEC-TTC------------------------TTCE--ETT--EEEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC---CcEEEEeC-CCC------------------------CCce--ECC--Eeee-
Confidence 46899999 6999999999888753 5544 555 310 0111 233 2333
Q ss_pred cCCCCCCCccccC-ccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 164 NRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 164 ~~~p~~l~W~~~g-vDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
.+.++++- +.+ +|+++.++......+.+...+++|.+.+|+
T Consensus 60 -~sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 60 -DSVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp -SSHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred -CCHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22333331 113 899999999888888888999999996665
No 207
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=83.54 E-value=0.8 Score=45.55 Aligned_cols=31 Identities=23% Similarity=0.210 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCce-EEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~-vVaInd 120 (409)
.+|||+|+|+||+.+.+.|.... ++ |++.+.
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G---~~~V~~~d~ 196 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFN---PKELLYYDY 196 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC---CSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CcEEEEECC
Confidence 58999999999999999987543 66 777653
No 208
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=83.41 E-value=0.94 Score=41.70 Aligned_cols=30 Identities=13% Similarity=0.447 Sum_probs=23.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|||+|+|+|.+|+.+++.|.... .+|...+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g---~~v~~~~ 33 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP---HELIISG 33 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS---CEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhCC---CeEEEEC
Confidence 69999999999999999987653 4554443
No 209
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.28 E-value=1.1 Score=42.70 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|+|+|+|+||+.+++.|.... ++|.+.+.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG---AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 48999999999999999998653 58877764
No 210
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.25 E-value=0.78 Score=43.63 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=26.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++||+|+|+|.+|+.+.+.|.+.. .+|+..+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G---~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP---GGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST---TCEEEECS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 469999999999999999988653 57776653
No 211
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=83.19 E-value=0.99 Score=46.00 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|||+|+|+||+.+.+.+.... ++|++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G---~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLG---MTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEC
Confidence 48999999999999999988653 7887765
No 212
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=82.59 E-value=2.9 Score=40.05 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=24.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaI 118 (409)
++||+|.|.|.+|..+...|.+.. .+|..+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G---~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG---HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC---CeEEEE
Confidence 579999999999999999988653 466666
No 213
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=82.55 E-value=1.1 Score=41.98 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=25.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
++||+|.|+|.+|+.+.+.|.... .+|+.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG---VTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 469999999999999999988653 5776554
No 214
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.49 E-value=2.3 Score=40.96 Aligned_cols=81 Identities=22% Similarity=0.283 Sum_probs=48.3
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecCCC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDP 167 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~~p 167 (409)
+|.|+|.|.||...++++..+. .+|+++... .+.+.++.+ +| . +.+ + .++
T Consensus 179 ~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~--~~~~~~~~~----lG---------a-~~v-~----------~~~ 228 (348)
T 3two_A 179 KVGVAGFGGLGSMAVKYAVAMG---AEVSVFARN--EHKKQDALS----MG---------V-KHF-Y----------TDP 228 (348)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT---CEEEEECSS--STTHHHHHH----TT---------C-SEE-E----------SSG
T ss_pred EEEEECCcHHHHHHHHHHHHCC---CeEEEEeCC--HHHHHHHHh----cC---------C-Cee-c----------CCH
Confidence 7999999999999999887664 488777532 222222222 11 0 111 1 122
Q ss_pred CCCCccccCccEEEeCCCCCCChhhHHHHHHcCC
Q 015291 168 LQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (409)
Q Consensus 168 ~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGa 201 (409)
+.+ .+ ++|+||||+|.....+.+-..++.|-
T Consensus 229 ~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G 259 (348)
T 3two_A 229 KQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNG 259 (348)
T ss_dssp GGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEE
T ss_pred HHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCC
Confidence 222 22 89999999997655555555554443
No 215
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.39 E-value=1.2 Score=42.41 Aligned_cols=31 Identities=29% Similarity=0.391 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|+|.|+|+||+.+++.|.... ++|.+.+.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG---ANVKVGAR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 58999999999999999998653 58877764
No 216
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=82.04 E-value=2.4 Score=43.32 Aligned_cols=32 Identities=31% Similarity=0.388 Sum_probs=28.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
.+|+|-|||-+|+.+++.|.+.. ..||+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~G---akVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMG---AKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEECC
Confidence 58999999999999999998764 799999986
No 217
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.92 E-value=1 Score=45.54 Aligned_cols=36 Identities=28% Similarity=0.468 Sum_probs=29.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhh
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNA 127 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~ 127 (409)
++|.|.|+||+|+.+.+.|.++. +++++|.. +++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g---~~vvvId~--d~~~v 40 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG---VKMVVLDH--DPDHI 40 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEEC--CHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC---CCEEEEEC--CHHHH
Confidence 47999999999999999998764 68888864 44443
No 218
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=81.69 E-value=1.7 Score=42.16 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=26.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 45899999 9999999999998764 57777654
No 219
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=81.59 E-value=2.5 Score=43.15 Aligned_cols=94 Identities=21% Similarity=0.350 Sum_probs=51.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCC--------------ChhhhhhhhcccccccccCceEEEecCCe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG--------------GVKNASHLLKYDSLLGTFKADVKIVDNET 151 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~--------------~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~ 151 (409)
..||+|-|||-||+.+++.|.+.. ..||+|.|.. +++.+ +++-..+|++..
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~~~~~~G~i~d~~Gld~~~l---~~~~~~~g~i~~--------- 276 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQG---GKVCAIAEWDRNEGNYALYNENGIDFKEL---LAYKEANKTLIG--------- 276 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHTT---CCEEECCBCCSSSCSBCCBCSSCCCHHHH---HHHHHHHCC------------
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEEEecCCCccceEEECCCCCCHHHH---HHHHHhcCCccc---------
Confidence 358999999999999999999864 6999999874 12222 221111232110
Q ss_pred EEEC-CeEEEEEecCCCCCCCccccCccEEEeCC-CCCCChhhHHHHHHcCCCEEEEeC
Q 015291 152 ISVD-GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 152 l~v~-gk~I~v~~~~~p~~l~W~~~gvDiVle~T-G~f~s~e~a~~hl~aGakkVVISa 208 (409)
+. .+.+ +++++ |. .++|+.+.|+ +..++.+.|..+ +|| +|+.+
T Consensus 277 --~~~a~~i------~~~~~-~~-~~~DIliP~A~~n~i~~~~A~~l---~ak-~VvEg 321 (421)
T 2yfq_A 277 --FPGAERI------TDEEF-WT-KEYDIIVPAALENVITGERAKTI---NAK-LVCEA 321 (421)
T ss_dssp ----------------------------CEEECSCSSCSCHHHHTTC---CCS-EEECC
T ss_pred --CCCceEe------Cccch-hc-CCccEEEEcCCcCcCCcccHHHc---CCe-EEEeC
Confidence 11 1111 12333 64 5799999997 667777777654 665 45544
No 220
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.21 E-value=1.4 Score=40.87 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|||+|+|+|.+|+.+.+.|.... .+|++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 30 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG---HYLIGVS 30 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999998753 5777664
No 221
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=80.98 E-value=1.4 Score=41.29 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||+|+|+|.+|+.+.+.|.+.. .+|+..+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G---~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG---CSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC---CeEEEEcC
Confidence 58999999999999999998764 57776653
No 222
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=80.96 E-value=1.3 Score=42.53 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+||||+|+|.+|+.+.+.|.... .+|+..+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG---YALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHhCC---CeEEEEcC
Confidence 369999999999999999998764 58776654
No 223
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=80.96 E-value=1.5 Score=40.37 Aligned_cols=32 Identities=22% Similarity=0.372 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+||||+|+|.+|+.+.+.|.+.. .+|...+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G---~~V~~~~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG---HEVTIGTR 50 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 569999999999999999998764 57776654
No 224
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=80.91 E-value=1.6 Score=38.54 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEe
Confidence 4799999 8999999999999874 58887764
No 225
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=80.90 E-value=2.3 Score=40.16 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=25.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.++|.|-| +|-||+.+++.|.++. .+|+++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG---RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 46899999 8999999999999864 57777653
No 226
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=80.81 E-value=1.3 Score=45.11 Aligned_cols=33 Identities=21% Similarity=0.422 Sum_probs=27.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+|||+|.|.|.+|..+...|.+.. .+|++++-
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G---~~V~~~D~ 33 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG---ANVRCIDT 33 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC---CEEEEEEC
Confidence 5579999999999999999998764 58877753
No 227
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=80.80 E-value=1.3 Score=42.43 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+||||+|+|.+|+.+.+.|.+.. ++|++.|.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G---~~V~~~dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG---KRVAIWNR 40 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 468999999999999999998764 57776654
No 228
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=80.79 E-value=1.4 Score=42.35 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=26.8
Q ss_pred cccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 82 ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 82 ~~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
-+.|++||+|.|.|.+|..+.+.|.+.. .+|..++.
T Consensus 10 ~~~~~~kI~iIG~G~mG~ala~~L~~~G---~~V~~~~r 45 (335)
T 1z82_A 10 HHHMEMRFFVLGAGSWGTVFAQMLHENG---EEVILWAR 45 (335)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ccccCCcEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 4578999999999999999999988653 47766664
No 229
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=80.76 E-value=1.4 Score=41.58 Aligned_cols=31 Identities=16% Similarity=0.183 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||+|+|+|.+|+.+.+.|.+.. .+|+.++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d~ 34 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG---YLLNVFDL 34 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHHhCC---CeEEEEcC
Confidence 59999999999999999998764 58777753
No 230
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=80.53 E-value=2 Score=43.52 Aligned_cols=110 Identities=14% Similarity=0.159 Sum_probs=60.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC-CCChhhhhhhh-cccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd-~~~~~~~a~Ll-~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
-||.|.| ||-||++.|+.+...+ +.|+|+|+.. -.+.+.++... +|... -+.+ .+... .....++++.
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aLaa~g~nv~~L~~q~~~f~p~------~v~v-~d~~~-~~~~~~~v~~ 92 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNP-DRFEVVGLAAGGAHLDTLLRQRAQTGVT------NIAV-ADEHA-AQRVGDIPYH 92 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCT-TTEEEEEEEECSSCHHHHHHHHHHHCCC------CEEE-SCHHH-HHHHCCCSEE
T ss_pred eEEEEEccCcHHHHHHHHHHHhCC-CceEEEEEEecCCCHHHHHHHHHHcCCC------EEEE-cCHHH-hhhcCCEEEe
Confidence 4799999 9999999999998764 3599999987 44666555443 22211 1111 01000 0000112221
Q ss_pred cCC-CCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 164 NRD-PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 164 ~~~-p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
..+ ..++- ...++|+|+-+.-.+....---..+++| |++.+.
T Consensus 93 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLA 135 (398)
T 2y1e_A 93 GSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTG-ARLALA 135 (398)
T ss_dssp STTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHT-CEEEEC
T ss_pred cHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCC-CceEEc
Confidence 111 11110 0015899999875565555555678888 455553
No 231
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=80.49 E-value=1.9 Score=43.73 Aligned_cols=112 Identities=19% Similarity=0.238 Sum_probs=61.7
Q ss_pred cceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhh-cccccccccCceEEEecCCe----EE--E-
Q 015291 84 VAKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNET----IS--V- 154 (409)
Q Consensus 84 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll-~yDS~~G~f~~~v~~~~~~~----l~--v- 154 (409)
.|+ +|.|.| ||-||.+.|+.+...+ +.|+|+|+..-.+.+.++... +|... -+.+ .+.. |. +
T Consensus 8 ~~k-~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aL~ag~nv~~L~~q~~~f~p~------~v~v-~d~~~~~~L~~~l~ 78 (406)
T 1q0q_A 8 GMK-QLTILGSTGSIGCSTLDVVRHNP-EHFRVVALVAGKNVTRMVEQCLEFSPR------YAVM-DDEASAKLLKTMLQ 78 (406)
T ss_dssp -CE-EEEEETTTSHHHHHHHHHHHHCT-TTEEEEEEEESSCHHHHHHHHHHHCCS------EEEE-SSHHHHHHHHHHHH
T ss_pred Cce-eEEEEccCcHHHHHHHHHHHhCC-CccEEEEEEcCCCHHHHHHHHHHhCCC------EEEE-cCHHHHHHHHHHhh
Confidence 344 899999 9999999999998764 359999997654566555443 22211 1111 0100 00 0
Q ss_pred -CCeEEEEEecCC-CCCC-CccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 155 -DGKLIKVVSNRD-PLQL-PWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 155 -~gk~I~v~~~~~-p~~l-~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
.|..++++...+ ..++ .+ .++|+|+-+.-.+....---..+++| |++.+.
T Consensus 79 ~~~~~~~v~~G~~~l~~~a~~--~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLA 131 (406)
T 1q0q_A 79 QQGSRTEVLSGQQAACDMAAL--EDVDQVMAAIVGAAGLLPTLAAIRAG-KTILLA 131 (406)
T ss_dssp HTTCCCEEEESHHHHHHHHTC--TTCCEEEECCSSGGGHHHHHHHHHTT-CEEEEC
T ss_pred cCCCCcEEEeCHHHHHHHhcC--CCCCEEEEccccHhHHHHHHHHHHCC-CeEEEe
Confidence 121223332211 1111 11 15899999875565555555678888 455553
No 232
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=80.23 E-value=3.7 Score=39.69 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=19.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~ 108 (409)
|||+|.|.|.||..+.-.|..+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~ 22 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN 22 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC
Confidence 6899999999999998777654
No 233
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=80.19 E-value=1.5 Score=41.85 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||+|+|+|.+|+.+.+.|.+.. .+|+..+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G---~~V~~~dr 52 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG---FKVTVWNR 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCC---CeEEEEeC
Confidence 69999999999999999998764 57777754
No 234
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=79.89 E-value=2.5 Score=43.21 Aligned_cols=96 Identities=19% Similarity=0.328 Sum_probs=56.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCC----hh--hhhhhhcccccccccCceEEEecCCeEEECCeEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG----VK--NASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~----~~--~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I 159 (409)
..||+|-|||-||+.+++.|.+.. ..||+|.|..+ ++ .+..|+++-..+|++.. +..+.+
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~G---akVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~-----------~~a~~~ 286 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDAG---AKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTN-----------LFTDVI 286 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT---CEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGG-----------GCSCCB
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCC-----------CCcEEe
Confidence 468999999999999999998764 68999999621 10 01123322222332210 001111
Q ss_pred EEEecCCCCCCCccccCccEEEeCC-CCCCChhhHHHHHHcCCCEEEEe
Q 015291 160 KVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 160 ~v~~~~~p~~l~W~~~gvDiVle~T-G~f~s~e~a~~hl~aGakkVVIS 207 (409)
+++++ |. ..+|+.+-|+ +.-++.+.+.. -+|| +|+-
T Consensus 287 ------~~~~i-~~-~~~DIliPcA~~n~I~~~~a~~---l~ak-~V~E 323 (424)
T 3k92_A 287 ------TNEEL-LE-KDCDILVPAAISNQITAKNAHN---IQAS-IVVE 323 (424)
T ss_dssp ------CHHHH-HH-SCCSEEEECSCSSCBCTTTGGG---CCCS-EEEC
T ss_pred ------cCccc-ee-ccccEEeecCcccccChhhHhh---cCce-EEEc
Confidence 11222 64 5799999998 66677777665 2664 4453
No 235
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.80 E-value=1.7 Score=40.47 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||+|+|+|.+|+.+.+.|..... ..+|++++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC-CcEEEEEeC
Confidence 489999999999999999986531 237766643
No 236
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.74 E-value=1.7 Score=40.69 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=25.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
++||+|+|+|.+|+.+.+.|.... ...+|++.+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d 38 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDH-PHYKIVGYN 38 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCC-CCcEEEEEc
Confidence 469999999999999999987642 135776654
No 237
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=79.70 E-value=1.9 Score=38.22 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=25.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||+|.| .|.+|+.+++.|.+.. .+|+.++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4899999 9999999999998653 57777764
No 238
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=79.61 E-value=1.4 Score=45.01 Aligned_cols=40 Identities=23% Similarity=0.415 Sum_probs=30.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhh
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~L 130 (409)
.|||-|.|+|++|+.+.+.|.+.. .+|+.|.. +.+.+..|
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~---~~v~vId~--d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN---NDITIVDK--DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT---EEEEEEES--CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CCEEEEEC--CHHHHHHH
Confidence 479999999999999999987653 68888865 44444333
No 239
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=79.39 E-value=1.9 Score=38.94 Aligned_cols=30 Identities=17% Similarity=0.259 Sum_probs=23.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaI 118 (409)
.+||+|.|.|.+|..+.+.|.+.. .+|..+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g---~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG---HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEE
Confidence 468999999999999999988653 465444
No 240
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.34 E-value=1.7 Score=41.57 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|||+|.|.|.+|..+...|.... .+|..++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKG---QSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 369999999999999999888653 57766653
No 241
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=79.21 E-value=0.76 Score=43.20 Aligned_cols=32 Identities=22% Similarity=0.157 Sum_probs=27.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.|||+|+|.|.||..+.+.|.... .+|++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G---~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVG---HYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTT---CEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCC---CEEEEecC
Confidence 469999999999999999998764 68887765
No 242
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=79.20 E-value=0.91 Score=41.61 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=25.1
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
||.|.| +|.||+.+++.|.++. +..+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTV-PASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhC-CCceEEEEEc
Confidence 588999 8999999999998751 1267877764
No 243
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=78.97 E-value=9 Score=39.95 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=28.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
.+|+|-|||.||+..++.|.+.. -.||+|.|.
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~G---akVVavsDs 276 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRFG---AKCITVGES 276 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 58999999999999999998864 589999874
No 244
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=78.96 E-value=1.6 Score=45.36 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G---~~V~~~d~ 173 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFG---AYVVAYDP 173 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC---CEEEEECC
Confidence 358999999999999999988653 68887754
No 245
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=78.84 E-value=1.6 Score=40.88 Aligned_cols=31 Identities=13% Similarity=0.340 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||+|+|+|.+|+.+.+.|.... .+|..++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g---~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG---YPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT---CCEEEECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 48999999999999999998753 57766653
No 246
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=78.78 E-value=1.9 Score=40.15 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=26.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|-| +|-||+.+++.|.++. .+|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 8999999999999875 58887754
No 247
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=78.64 E-value=1.6 Score=40.59 Aligned_cols=30 Identities=27% Similarity=0.347 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||+|.|+|.+|+.+.+.|.. . .+|+.++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g---~~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R---FPTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T---SCEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-C---CeEEEEeC
Confidence 589999999999999999886 4 57666653
No 248
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=78.36 E-value=3.6 Score=36.64 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=25.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCc-eEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~-~vVaInd 120 (409)
++|.|.| .|.||+.+++.|.++. .+ +|+++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G--~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQG--LFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHT--CCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcCC--CCCEEEEEEc
Confidence 5799999 9999999999998763 12 7776654
No 249
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=78.27 E-value=1.8 Score=39.87 Aligned_cols=29 Identities=28% Similarity=0.548 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaI 118 (409)
|||+|+|+|.+|+.+.+.|.+.. ++|...
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g---~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG---VEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEC
T ss_pred CeEEEEechHHHHHHHHHHHHCC---CeEEEe
Confidence 48999999999999999998753 576653
No 250
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.09 E-value=1.9 Score=40.87 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=25.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++||+|+|+|.+|+.+.+.|.... .+|..++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g---~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG---HTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC---CEEEEEeC
Confidence 368999999999999999988653 57666653
No 251
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=77.91 E-value=1.9 Score=42.60 Aligned_cols=32 Identities=22% Similarity=0.476 Sum_probs=27.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++||||+|+|.+|+.+.+.|.+.. .+|++.|.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG---HECVVYDL 53 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHhCC---CEEEEEeC
Confidence 379999999999999999998764 68777764
No 252
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=77.90 E-value=1.5 Score=41.16 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=26.2
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhC-----CCCCceEEEEeC
Q 015291 84 VAKLKVAINGFGRIGRNFLRCWHGR-----KDSPLDVVVVND 120 (409)
Q Consensus 84 ~m~ikVaInGfGrIGr~vlr~l~~~-----~~~~~~vVaInd 120 (409)
.|+|||+|.|.|.+|..+...|... . ..+|..++.
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g--~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDG--LLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTS--SEEEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCC--CCCEEEEEc
Confidence 4457999999999999999888754 2 047776654
No 253
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=77.75 E-value=2.1 Score=43.91 Aligned_cols=90 Identities=20% Similarity=0.161 Sum_probs=50.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~~ 166 (409)
.||.|.|.|.+||.+++.|.++. .++|+.++.. .+.+..|.+. .+ +. .+.+ ...+
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~--g~~V~v~~R~--~~ka~~la~~---~~-----~~------------~~~~-D~~d 78 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAAND--DINVTVACRT--LANAQALAKP---SG-----SK------------AISL-DVTD 78 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTST--TEEEEEEESS--HHHHHHHHGG---GT-----CE------------EEEC-CTTC
T ss_pred CEEEEECChHHHHHHHHHHHhCC--CCeEEEEECC--HHHHHHHHHh---cC-----Cc------------EEEE-ecCC
Confidence 58999999999999999998752 3677666642 2222222210 00 00 0111 0011
Q ss_pred CCCCCccccCccEEEeCCCCCCChhhHHHHHHcCC
Q 015291 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (409)
Q Consensus 167 p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGa 201 (409)
++++.-.-.++|+||.|+|.+.....+...+++|.
T Consensus 79 ~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~ 113 (467)
T 2axq_A 79 DSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT 113 (467)
T ss_dssp HHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC
Confidence 11110000268999999998765555556677776
No 254
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=77.71 E-value=1.4 Score=43.65 Aligned_cols=91 Identities=20% Similarity=0.206 Sum_probs=52.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
..||+|.|.|.+|+.+++.|.+. .+|+..+. +.+.+..+.+ . .. .+.+ ...
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~----~~V~V~~R--~~~~a~~la~--~-------------~~-------~~~~-d~~ 66 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE----FDVYIGDV--NNENLEKVKE--F-------------AT-------PLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHTT--T-------------SE-------EEEC-CTT
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC----CeEEEEEC--CHHHHHHHHh--h-------------CC-------eEEE-ecC
Confidence 46899999999999999998764 46654543 3333322221 0 00 0111 001
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
+.+++.=.-.++|+||.|++.....+-+...+++|+. +++
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~--~vD 106 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVD--MVD 106 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCC--EEE
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCe--EEE
Confidence 1111100001689999999876666667778888884 554
No 255
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=77.61 E-value=9.1 Score=36.82 Aligned_cols=89 Identities=18% Similarity=0.091 Sum_probs=55.3
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCC-ChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 87 ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~-~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
.||.++|.|.+|.. +.+.|.++. .+|.+ .|.. .......|-+ . | +.+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G---~~V~~-~D~~~~~~~~~~L~~---------------~-------g--i~v~~g 56 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG---FEVSG-CDAKMYPPMSTQLEA---------------L-------G--IDVYEG 56 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT---CEEEE-EESSCCTTHHHHHHH---------------T-------T--CEEEES
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC---CEEEE-EcCCCCcHHHHHHHh---------------C-------C--CEEECC
Confidence 48999999999996 788888775 46554 4431 1111111111 1 1 122222
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
.+++++.+ .++|+|+=+.|.-.+.+......+.|.+ |++
T Consensus 57 ~~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~--v~~ 95 (326)
T 3eag_A 57 FDAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGLP--YIS 95 (326)
T ss_dssp CCGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTCC--EEE
T ss_pred CCHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCCc--EEe
Confidence 34554431 2589999999998887777888888883 565
No 256
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=77.43 E-value=2.3 Score=43.38 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=28.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
.+|+|-|||-||+.+++.|.+.. ..||+|.|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~G---akVVavsD~ 250 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLG---MRVVAVATS 250 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEEET
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 58999999999999999998864 699999986
No 257
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=77.09 E-value=1.8 Score=41.98 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=25.9
Q ss_pred cee-eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKL-KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~i-kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+| ||+|+|.|.+|..+...|.... .+|..++.
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G---~~V~~~~r 46 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKC---REVCVWHM 46 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTE---EEEEEECS
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 445 9999999999999999887543 57766654
No 258
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=77.05 E-value=1.8 Score=39.95 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
|||+|+|+|++|+.+.+.|.... +++|.+-|.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g---~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG---FRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC---CeEEEEEeC
Confidence 68999999999999999987653 564444443
No 259
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=76.77 E-value=2.3 Score=40.72 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=25.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+|||+|.|.|.+|..+...|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTG---HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 6689999999999999999888653 47666654
No 260
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=76.72 E-value=2.1 Score=44.54 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|+|.|+|+||+.+.+.|.... ++|++.+.
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G---~~V~v~d~ 308 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLG---ATVWVTEI 308 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998653 68777653
No 261
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=76.46 E-value=0.77 Score=43.14 Aligned_cols=23 Identities=30% Similarity=0.566 Sum_probs=17.8
Q ss_pred ceeeEEEEcCChhHHHHHHHHHh
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHG 107 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~ 107 (409)
|+|||+|+|.|++|+.+.+.|..
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC-
T ss_pred CCceEEEEeCCHHHHHHHHHHHH
Confidence 45799999999999999988764
No 262
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=76.35 E-value=2.5 Score=41.15 Aligned_cols=30 Identities=20% Similarity=0.355 Sum_probs=24.7
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.|.|.||..+++++..+. .+|+++..
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 219 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAFG---SKVTVIST 219 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 7999999999999999887664 47777754
No 263
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=76.13 E-value=2.2 Score=40.55 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=25.5
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|..||+|+| +|.||..+.+.|.... .+|..++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G---~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG---YPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC---CeEEEEE
Confidence 445899999 9999999999998653 4666554
No 264
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=75.92 E-value=5.2 Score=38.91 Aligned_cols=23 Identities=26% Similarity=0.573 Sum_probs=20.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRK 109 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~ 109 (409)
|||+|.|.|.||..++..+..+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~ 23 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQD 23 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 58999999999999998887653
No 265
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=75.77 E-value=2.6 Score=38.82 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||+|.|.|.+|..+...|.+.. .+|..++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG---HEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CCEEEEEc
Confidence 48999999999999999998754 47776754
No 266
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=75.69 E-value=1.7 Score=40.77 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||+|.|+|.+|+.+.+.|.+.. .+|...+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG---FDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT---CCEEEECS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC---CeEEEEcC
Confidence 48999999999999999988754 57776654
No 267
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=75.49 E-value=2.3 Score=40.21 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=25.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
++||+|+|.|.+|+.+.+.|.....+.-+|...+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~d 36 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTN 36 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEe
Confidence 4689999999999999999987642112665554
No 268
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=75.27 E-value=2.2 Score=40.87 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=26.5
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 84 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.|.-|||++|+|.+|..+.+.|.+.. ++|++.|.
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G---~~V~v~dr 36 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAG---YELVVWNR 36 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTT---CEEEEC--
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 35568999999999999999998764 68877664
No 269
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=77.22 E-value=0.58 Score=42.36 Aligned_cols=32 Identities=22% Similarity=0.128 Sum_probs=24.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+.+||+|+|+|.+|+.+.+.|.+.. .+|..++
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G---~~V~~~~ 49 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG---YSVVFGS 49 (201)
Confidence 4568999999999999999887543 3554443
No 270
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=75.10 E-value=2.3 Score=41.88 Aligned_cols=31 Identities=35% Similarity=0.434 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.||+|+|+|.||..+.+.|.... .+|++.+.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G---~~V~~~dr 39 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAAN---HSVFGYNR 39 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998764 57777763
No 271
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=75.01 E-value=2.5 Score=38.90 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|.|.|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG---HEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998864 57777754
No 272
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=74.63 E-value=2.2 Score=43.59 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++||||+|+|.+|+.+.+.|.+.. ++|...|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G---~~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG---YTVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC---CEEEEEcC
Confidence 368999999999999999998764 57766664
No 273
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=74.34 E-value=2.5 Score=38.79 Aligned_cols=31 Identities=13% Similarity=0.158 Sum_probs=23.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|||+|+|.|.+|+.+.+.|..... .+|..++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~--~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGG--YRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS--CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCCC--CeEEEEC
Confidence 489999999999999998876431 3665554
No 274
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=74.18 E-value=2.2 Score=44.28 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|+|.|+|+||+.+.+.+.... ++|++.+-
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G---~~Viv~d~ 288 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLG---ARVYITEI 288 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCc---CEEEEEeC
Confidence 48999999999999999987653 68777753
No 275
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=73.93 E-value=1.6 Score=42.48 Aligned_cols=32 Identities=28% Similarity=0.252 Sum_probs=24.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
+||+|.|.|.+|..+..+|..... ++ |.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~--~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNL--GD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--CE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--Ce-EEEEeC
Confidence 599999999999999988887642 36 444454
No 276
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=73.91 E-value=2.8 Score=43.32 Aligned_cols=30 Identities=20% Similarity=0.379 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
-+|+|.|||+||+.+.+.+.... .+|++.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG---a~Viv~d 277 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG---ARVKVTE 277 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999999999999999988654 6776554
No 277
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=73.90 E-value=2.8 Score=42.98 Aligned_cols=30 Identities=23% Similarity=0.450 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|+|+|+|+||+.+.+.|.... ++|++.+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G---a~Viv~D 241 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG---ARVVVTE 241 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEC
Confidence 58999999999999999998754 5766554
No 278
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=73.78 E-value=2.5 Score=40.30 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=24.3
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|++||+|.|.|.+|..+...|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG---EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS---CCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC---CeEEEEEc
Confidence 5689999999999999999888653 36665654
No 279
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=73.63 E-value=4.8 Score=40.95 Aligned_cols=31 Identities=23% Similarity=0.218 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|.|.|.|.||+.+++.|.+.. .+|+.++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G---~~V~v~~R 34 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSG---IKVTVACR 34 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEEC
Confidence 47999999999999999998643 57665553
No 280
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=73.54 E-value=2.4 Score=40.59 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=24.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
++||||+|+|.+|..+.+.|.... . +|...+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G---~~~V~~~d 55 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG---AIDMAAYD 55 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS---CCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CCeEEEEc
Confidence 369999999999999999998753 4 666554
No 281
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=73.33 E-value=2.8 Score=40.83 Aligned_cols=31 Identities=32% Similarity=0.338 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||+|+|+|.||+.+.+.|.... ++|+..+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G---~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG---VDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc---CEEEEEEC
Confidence 58999999999999999998753 57665554
No 282
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=73.14 E-value=1.8 Score=40.89 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=23.2
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|+|||+|.|.|.+|..+...|.+.. .+|..+.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g---~~V~~~~ 32 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSL---PHTTLIG 32 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHC---TTCEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 5689999999999999998887543 2444444
No 283
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=73.02 E-value=3.3 Score=38.53 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=26.1
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|.+||.|.| +|.||+.+++.|.++. .+|+++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEc
Confidence 456899999 8999999999998764 5777764
No 284
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=73.00 E-value=3.8 Score=38.13 Aligned_cols=31 Identities=29% Similarity=0.308 Sum_probs=25.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+||.|.| +|.||+.+++.|.++. .+|+++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRG---DVELVLR 34 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT---TEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEe
Confidence 46899999 9999999999998764 4776654
No 285
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=72.93 E-value=3.1 Score=38.44 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=27.0
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|++||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG---EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 356899999 8999999999998874 57777754
No 286
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=72.48 E-value=2.7 Score=36.58 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=26.1
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|.+||.|.| +|.||+.+++.|.++.. ..+|+++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~ 38 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPA 38 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCB
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEe
Confidence 456899999 99999999999988641 02666554
No 287
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=72.42 E-value=6 Score=37.99 Aligned_cols=32 Identities=22% Similarity=0.406 Sum_probs=25.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhC-CCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGR-KDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~-~~~~~~vVaInd 120 (409)
++|-|-| +|.||+.+++.|.++ . ..+|+++..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g--~~~V~~~~r 55 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTN--AKKIIVYSR 55 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC--CSEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCC--CCEEEEEEC
Confidence 5899999 999999999999875 3 127777654
No 288
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=72.30 E-value=1.7 Score=36.39 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=23.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
..||+|.|.|.+|+.+++.|..+. ++|..++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g---~~v~v~~ 51 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ---YKVTVAG 51 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT---CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEc
Confidence 358999999999999999887643 6744444
No 289
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=71.71 E-value=8.7 Score=37.94 Aligned_cols=23 Identities=30% Similarity=0.460 Sum_probs=19.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGR 108 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~ 108 (409)
++||+|.| .|.||..++-.|...
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~ 47 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARG 47 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHT
T ss_pred CCEEEEECcCcHHHHHHHHHHHhc
Confidence 68999999 699999998777643
No 290
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=71.55 E-value=3.2 Score=39.34 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
-+|.|+|.|.||...++++..+. .+|+++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG---YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEE
Confidence 37999999999999999887653 4888886
No 291
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=71.31 E-value=2.2 Score=39.05 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=20.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~ 108 (409)
+|||+|+|.|.+|..+.+.|...
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~ 26 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA 26 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC
Confidence 36899999999999999988764
No 292
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=71.29 E-value=2.1 Score=43.78 Aligned_cols=93 Identities=22% Similarity=0.274 Sum_probs=53.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECC--eEEEEEec
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDG--KLIKVVSN 164 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~g--k~I~v~~~ 164 (409)
-||-|.|-|+||..+++.|+++ +++.-|.. +.+.+.+|-+ .+ .+.+.++| ....++.+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~----~~v~iIE~--d~~r~~~la~------~l--------~~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT----YSVKLIER--NLQRAEKLSE------EL--------ENTIVFCGDAADQELLTE 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHHH------HC--------TTSEEEESCTTCHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhhc----CceEEEec--CHHHHHHHHH------HC--------CCceEEeccccchhhHhh
Confidence 3799999999999999998653 56666654 3333322221 11 12344433 22233333
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChh-hHHHHHHcCCCEEEE
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGP-GAGKHIQAGAKKVII 206 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e-~a~~hl~aGakkVVI 206 (409)
... . ..|+++-+|+....-- -+..+.+.|++|+|.
T Consensus 296 e~i---~----~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 296 ENI---D----QVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp TTG---G----GCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCc---h----hhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 322 1 5799999998753322 223444578888655
No 293
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=70.91 E-value=9.8 Score=35.27 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|-|+|.|.+|..-++.|.+.. -+|+.|+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G---A~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG---AAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC---CCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEECC
Confidence 47999999999999999998754 24444543
No 294
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=70.81 E-value=3.2 Score=42.65 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=27.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+.||||+|.|.+|..+.+.|.+.. ++|+..|.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~~r 46 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRG---YTVSIFNR 46 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTT---CCEEEECS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCC---CeEEEEeC
Confidence 678999999999999999998654 57777765
No 295
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=70.80 E-value=3.2 Score=42.93 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=28.5
Q ss_pred ccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 83 ~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+.|..||||+|.|.+|..+.+.|.+.. ++|+..|.
T Consensus 7 ~~~~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~dr 41 (497)
T 2p4q_A 7 HHMSADFGLIGLAVMGQNLILNAADHG---FTVCAYNR 41 (497)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred ccCCCCEEEEeeHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 467889999999999999999998764 57777765
No 296
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=70.13 E-value=4.1 Score=40.57 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
.+|+|.|||.||+.+.+.|.+.. .+|+ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G---akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG---AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEE-EEeC
Confidence 47999999999999999998764 6888 7775
No 297
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=69.42 E-value=3.8 Score=40.38 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=25.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|+|||+|.|.|.+|..+...|.... ..+|..+.
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTST--TEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCC--CCEEEEEe
Confidence 4579999999999999999886531 25776665
No 298
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=69.25 E-value=3.4 Score=39.64 Aligned_cols=35 Identities=9% Similarity=0.211 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCC-CCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~-~~~~vVaInd 120 (409)
+|||+|+|.|.+|..+.+.|..... +..+|..++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 4689999999999999999886531 1146666654
No 299
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=69.18 E-value=4.6 Score=39.42 Aligned_cols=29 Identities=28% Similarity=0.179 Sum_probs=23.3
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|+|.|.||...++++..+. . +|+++.
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 214 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLAG---ATTVILST 214 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 6999999999999999887654 4 666664
No 300
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=68.97 E-value=9.4 Score=37.51 Aligned_cols=23 Identities=13% Similarity=0.075 Sum_probs=20.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRK 109 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~ 109 (409)
+||+|.|.|.||..++..+..+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g 44 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKD 44 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 68999999999999998887653
No 301
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=68.95 E-value=3.7 Score=38.85 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||+|.|.|.+|..+.+.|.+.. .+|..++.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g---~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG---NEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEEc
Confidence 48999999999999999887653 47776754
No 302
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=68.81 E-value=4.3 Score=41.61 Aligned_cols=30 Identities=20% Similarity=0.353 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|+|.|+|.||+.+++.|.... .+|++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G---a~Viv~D 250 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG---SIVYVTE 250 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999998754 5766554
No 303
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=68.57 E-value=4.4 Score=38.17 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=27.1
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|.++|-|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDN 34 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEec
Confidence 556899999 9999999999998764 57777743
No 304
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=68.23 E-value=4.9 Score=37.63 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=26.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG---HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CEEEEEec
Confidence 5899999 9999999999998864 58877754
No 305
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=68.14 E-value=3.9 Score=41.83 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||||+|.|.+|+.+.+.|.+.. ++|...|.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G---~~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 58999999999999999998764 57776664
No 306
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=68.08 E-value=4.2 Score=39.77 Aligned_cols=30 Identities=27% Similarity=0.386 Sum_probs=24.3
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|+|.|.||...++++..+. .+|+++..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~G---a~Vi~~~~ 226 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMG---AHVVAFTT 226 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 7999999999999999887664 47776653
No 307
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=68.04 E-value=4 Score=41.85 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||||+|.|.+|+.+.+.|.+.. .+|...|.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G---~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG---FKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998764 57776664
No 308
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=67.48 E-value=3.3 Score=38.27 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=26.9
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|.+||.|.| +|.||+.+++.|.++. +..+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 36 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLY-GTENVIASDI 36 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHH-CGGGEEEEES
T ss_pred CCceEEEECCccHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence 456899999 8999999999998750 1257777754
No 309
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=67.38 E-value=4.1 Score=42.10 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=26.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++||||+|+|.+|+.+.+.|.+.. ++|++.|.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G---~~V~v~dr 35 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 35 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCC---CEEEEEeC
Confidence 368999999999999999998764 58777764
No 310
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=66.46 E-value=5.3 Score=38.39 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=26.7
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+ |||++|+|..|+.+.+.|.+.. ++|.+-|.
T Consensus 3 M~-kIgfIGlG~MG~~mA~~L~~~G---~~v~v~dr 34 (300)
T 3obb_A 3 MK-QIAFIGLGHMGAPMATNLLKAG---YLLNVFDL 34 (300)
T ss_dssp CC-EEEEECCSTTHHHHHHHHHHTT---CEEEEECS
T ss_pred cC-EEEEeeehHHHHHHHHHHHhCC---CeEEEEcC
Confidence 53 8999999999999999998754 68777765
No 311
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=66.32 E-value=4.6 Score=38.57 Aligned_cols=34 Identities=24% Similarity=0.213 Sum_probs=27.7
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
++||.|.| +|.||+.+++.|.++. ..+|+++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETT--DWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHS--SCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC--CCEEEEEeCC
Confidence 46899999 9999999999998762 2688888653
No 312
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=66.21 E-value=5.3 Score=38.28 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=32.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhc
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK 132 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~ 132 (409)
|||.|-| +|.||+.+++.|.++. .++|+++.-..+.+.+..+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~~~d~~~l~~~~~ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHRQTKEEELESALL 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCTTCCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECCCCCHHHHHHHhc
Confidence 4899999 9999999999998764 257776643256666665553
No 313
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=66.06 E-value=5 Score=40.33 Aligned_cols=30 Identities=27% Similarity=0.581 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|||+|+|.|.+|..+...|.+.. .+|++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G---~~V~~~d 30 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG---HEVIGVD 30 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999998764 5777774
No 314
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=66.05 E-value=13 Score=36.54 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=23.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|+|.|.||...++++.... . +|+++.
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 245 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHAG---ASKVILSE 245 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 6999999999999999887653 4 777764
No 315
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=66.02 E-value=31 Score=33.65 Aligned_cols=32 Identities=13% Similarity=0.238 Sum_probs=25.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
++|-|-| +|.||+.+++.|.++. .+|+++...
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~R~ 102 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRA 102 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTE---EEEEEEEEC
T ss_pred CEEEEecCCcHHHHHHHHHHHcCC---CEEEEEECC
Confidence 5899999 9999999999996543 577777543
No 316
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=65.92 E-value=5.7 Score=37.47 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=27.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46899999 9999999999998864 58887765
No 317
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=65.88 E-value=21 Score=34.12 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=23.3
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|+|.|.||...++++..+. . +|+++.
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 198 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLG---AGRIFAVG 198 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTT---CSSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CcEEEEEC
Confidence 6999999999999999887653 4 677664
No 318
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=65.86 E-value=4.7 Score=41.30 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=27.0
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|+|||+|+|.|.+|..+...|.+.. ...+|++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g-~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKC-PHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 3479999999999999999888652 136888775
No 319
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=65.56 E-value=5.9 Score=33.54 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=26.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|...|+|+|-|..|-.....|..+. ++|+.+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G---~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAG---HQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 6788999999999999999888764 67776754
No 320
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=65.50 E-value=5.3 Score=38.40 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=24.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.|||+|+|.|.+|..+...|.+.. .+|..+.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g---~~V~~~~ 33 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAG---EAINVLA 33 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEEE
Confidence 369999999999999999988754 4665555
No 321
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=65.45 E-value=6.3 Score=37.15 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.||+|+|.|.+|..+...|.... ++|+.++-
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G---~~V~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG---HTVVLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 48999999999999999988754 58776653
No 322
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=65.27 E-value=4.3 Score=41.28 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||+|+|+|.+|..+...|.+.. +..+|++++-
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g-~G~~V~~~d~ 38 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC-PEIRVTVVDV 38 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC-TTSEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEEC
Confidence 69999999999999999988652 1368877753
No 323
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=65.25 E-value=7.1 Score=37.38 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=23.9
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|.|.|.||...++++..+. . +|+++.
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 196 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASG---AGPILVSD 196 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 7999999999999999887653 4 677665
No 324
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=65.11 E-value=6 Score=37.43 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=24.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~--~vVaIn 119 (409)
+|||+|.|.|.||..+...|.... . +|+.+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g---~~~~V~l~d 39 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRG---IAREIVLED 39 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CCCEEEEEe
Confidence 469999999999999998887653 3 666553
No 325
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=64.61 E-value=3.6 Score=37.19 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=24.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
..+|.|.|+|++|+.+++.|.++. . |++|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g---~-v~vid 38 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE---V-FVLAE 38 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE---E-EEEES
T ss_pred CCEEEEECCChHHHHHHHHHHhCC---e-EEEEE
Confidence 458999999999999999987642 5 77674
No 326
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=64.06 E-value=8 Score=35.42 Aligned_cols=32 Identities=25% Similarity=0.603 Sum_probs=26.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 44 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN---VEVIPTDV 44 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEECT
T ss_pred cceEEEECCCChHHHHHHHHHHhCC---CeEEeccC
Confidence 46899999 9999999999998763 68877753
No 327
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=63.97 E-value=6.6 Score=36.83 Aligned_cols=30 Identities=17% Similarity=0.147 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.||+|+|.|.+|+.+.+.+.... ++|+.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G---~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG---FAVTAYD 34 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEe
Confidence 48999999999999999998764 6777664
No 328
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=63.57 E-value=5.2 Score=38.69 Aligned_cols=30 Identities=27% Similarity=0.268 Sum_probs=24.4
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.|.|.||...++++..+. .+|+++..
T Consensus 182 ~VlV~GaG~vG~~~~qlak~~G---a~Vi~~~~ 211 (360)
T 1piw_A 182 KVGIVGLGGIGSMGTLISKAMG---AETYVISR 211 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 7999999999999999887654 47777763
No 329
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=63.39 E-value=3.8 Score=39.68 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=24.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.|.|.||...++++..+. .+|+++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~~ 212 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMG---HHVTVISS 212 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 7999999999999999887653 47777654
No 330
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=63.35 E-value=7.8 Score=34.25 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=27.0
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+++|.|.| .|.||+.+++.|.++. +..+|+++..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~-~g~~V~~~~r 38 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGLVR 38 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-TTCEEEEEES
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcC-CCcEEEEEEc
Confidence 45899999 9999999999998862 1368877754
No 331
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=62.89 E-value=19 Score=36.57 Aligned_cols=82 Identities=22% Similarity=0.180 Sum_probs=55.2
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 87 ikVaInGf----GrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
-+|+|+|. |++|+.+++.|.+.. .-+|..||-. ++ . +.|. +++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g--~~~v~pVnP~-----------~~----------------~--i~G~--~~y 55 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNIK-----------EE----------------E--VQGV--KAY 55 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECSS-----------CS----------------E--ETTE--ECB
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcC--CCEEEEECCC-----------CC----------------e--ECCE--ecc
Confidence 47999995 489999999987652 3577778731 01 1 2332 332
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEE
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVI 206 (409)
.+.++++- .+|+++-+++.....+.....+++|+|.+|+
T Consensus 56 --~sl~~lp~---~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 56 --KSVKDIPD---EIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp --SSTTSCSS---CCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred --CCHHHcCC---CCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 34555552 6899888887766667777778889987665
No 332
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=62.68 E-value=8.3 Score=37.25 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=55.3
Q ss_pred eEEEE-cC-ChhHHHHHHHHHhCCCCCceEE-EEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 88 KVAIN-GF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 88 kVaIn-Gf-GrIGr~vlr~l~~~~~~~~~vV-aInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
+++|+ |+ |+.|+.+++.+.++. ++++ .||.. . .+.. +.| ++++
T Consensus 15 siaVV~Gasg~~G~~~~~~l~~~G---~~~v~~VnP~-~------------------------~g~~--i~G--~~vy-- 60 (305)
T 2fp4_A 15 TKVICQGFTGKQGTFHSQQALEYG---TNLVGGTTPG-K------------------------GGKT--HLG--LPVF-- 60 (305)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTT-C------------------------TTCE--ETT--EEEE--
T ss_pred cEEEEECCCCCHHHHHHHHHHHCC---CcEEEEeCCC-c------------------------Ccce--ECC--eeee--
Confidence 58888 95 999999999887654 5655 45421 0 0111 344 2343
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeC
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISa 208 (409)
.+.++++- +.++|+++-+++.....+.+...+++|.+.+|+-+
T Consensus 61 ~sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t 103 (305)
T 2fp4_A 61 NTVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVCIT 103 (305)
T ss_dssp SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred chHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEEC
Confidence 22333331 22689999999887777778888899999855533
No 333
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=62.65 E-value=4.2 Score=39.62 Aligned_cols=91 Identities=16% Similarity=0.140 Sum_probs=49.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
-+|.|+| .|.||...++++.... ..+|+++.. +.+.+.++.+ .| .+ -.++.+. .+. .
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~--~~~~~~~~~~----lG---ad--------~vi~~~~-~~~--~ 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRT--DLTVIATAS--RPETQEWVKS----LG---AH--------HVIDHSK-PLA--A 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECS--SHHHHHHHHH----TT---CS--------EEECTTS-CHH--H
T ss_pred CEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeC--CHHHHHHHHH----cC---CC--------EEEeCCC-CHH--H
Confidence 4799999 9999999998886521 157877754 2333333322 11 11 1121110 000 0
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGa 201 (409)
...++ ...++|+||||+|.....+.+...++.|-
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G 264 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQG 264 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTC
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCC
Confidence 11112 22489999999995433444555665555
No 334
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=62.30 E-value=9.8 Score=36.46 Aligned_cols=29 Identities=24% Similarity=0.256 Sum_probs=23.9
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|+|.|.||..+++++..+. . +|+++.
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 199 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASG---AYPVIVSE 199 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 7999999999999999887653 4 677664
No 335
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=62.06 E-value=7.3 Score=38.49 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|+|.|+|+||+.+++.+.... .+|++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~G---a~V~~~d~ 199 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMG---ATVTVLDI 199 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 458999999999999999988754 57777654
No 336
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=62.05 E-value=8.2 Score=37.72 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=27.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.||+|.|.|.+|+.+++++.+.. +++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G---~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG---YKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 38999999999999999998764 79988864
No 337
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=61.97 E-value=6.8 Score=36.27 Aligned_cols=30 Identities=27% Similarity=0.267 Sum_probs=24.6
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
||+|.|+|.+|+.+++.|.+.. .+|...|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g---~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG---LEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 8999999999999999998764 36665654
No 338
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=61.75 E-value=7.4 Score=40.25 Aligned_cols=45 Identities=24% Similarity=0.282 Sum_probs=33.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCC--CCCceEEEEeCCCChhhhhhhh
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRK--DSPLDVVVVNDSGGVKNASHLL 131 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~--~~~~~vVaInd~~~~~~~a~Ll 131 (409)
.||.|.| ||-||.+.|+.+...+ .+.|+|+|+..-.+.+.++...
T Consensus 78 k~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~ 125 (488)
T 3au8_A 78 INVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQA 125 (488)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHH
Confidence 4799999 9999999999998621 1249999997644555555443
No 339
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=61.62 E-value=8.2 Score=37.17 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=23.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCce-EEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~-vVaIn 119 (409)
+|.|+|.|.||...++++..+. .+ |+++.
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 211 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAAG---ACPLVITD 211 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 6999999999999999887664 34 66664
No 340
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=61.11 E-value=7.2 Score=40.47 Aligned_cols=30 Identities=30% Similarity=0.523 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|+|.|+|.||+.+++.+.... .+|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G---a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG---ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999999999999999988654 5777665
No 341
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=60.95 E-value=8 Score=36.96 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=26.7
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+.+|-|.| +|.||+.+++.|.++. .+|+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKG---YEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEEC
Confidence 445899999 9999999999998764 58877754
No 342
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=60.83 E-value=14 Score=34.95 Aligned_cols=30 Identities=20% Similarity=0.249 Sum_probs=24.0
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.| .|.||...++++..+. .+|+++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG---YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 699999 5999999999887664 46777654
No 343
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=60.70 E-value=7.9 Score=38.49 Aligned_cols=31 Identities=23% Similarity=0.481 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
.+|+|.|+|.||+.+.+.|.+.. .+|+ +.|+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G---akVv-v~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG---AKLV-VTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC---CEEE-EEcC
Confidence 47999999999999999998764 5877 6665
No 344
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=60.67 E-value=3.8 Score=37.35 Aligned_cols=33 Identities=12% Similarity=0.127 Sum_probs=25.9
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+.+|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSDI 34 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE---EEEEECCS
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 445899999 8999999999988753 57766543
No 345
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=60.64 E-value=11 Score=31.00 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=27.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
.+|.|+|.|..|+.+++.+... +.++++++=|.
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~--~g~~vvg~~d~ 37 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQG--KEFHPIAFIDD 37 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS--SSEEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCcEEEEEEEC
Confidence 5899999999999999998865 35899888663
No 346
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=60.40 E-value=14 Score=35.73 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=24.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.|.|.||...++++..+. .+|+++..
T Consensus 192 ~VlV~G~G~vG~~a~qla~~~G---a~Vi~~~~ 221 (363)
T 3uog_A 192 RVVVQGTGGVALFGLQIAKATG---AEVIVTSS 221 (363)
T ss_dssp EEEEESSBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CEEEEEec
Confidence 7999999999999999887664 47877753
No 347
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=59.94 E-value=8.4 Score=36.07 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=25.7
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|.+||-|-| +|-||+.+++.|.++. .+|+++-
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~ 40 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKG---YAVNTTV 40 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEE
Confidence 456899999 9999999999998764 5777643
No 348
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=59.72 E-value=8.9 Score=35.13 Aligned_cols=30 Identities=13% Similarity=0.354 Sum_probs=25.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|. +. .+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r 31 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDV 31 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECT
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEecc
Confidence 4899999 8999999999988 53 68887754
No 349
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=59.67 E-value=17 Score=39.47 Aligned_cols=147 Identities=16% Similarity=0.230 Sum_probs=73.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCCh-------hhhhhhhcccccccccCceEEEecCCeEEECCeEE
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGV-------KNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~-------~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I 159 (409)
-||||+|.|.+|+-+...+.... ++|+-+ |. +. +.+...++.....++...... .. ..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG---~~V~l~-D~-~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~--~~-------~~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVG---ISVVAV-ES-DPKQLDAAKKIITFTLEKEASRAHQNGQAS--AK-------PKL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEE-CS-SHHHHHHHHHHHHHHHHHHHHHHHTTTCCC--CC-------CCE
T ss_pred cEEEEEcccHHHHHHHHHHHhCC---Cchhcc-cc-hHhhhhhHHHHHHHHHHHHHHhccccchhh--hh-------hhh
Confidence 37999999999999998887653 787644 43 22 222222211111122111111 00 122
Q ss_pred EEEecCCCCCCCccccCccEEEeCCCCCCChh-----hHHHHHHcCCCEEEEeCCCC--------CCCCCeEEe---cCC
Q 015291 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGP-----GAGKHIQAGAKKVIITAPAK--------GADIPTYVV---GVN 223 (409)
Q Consensus 160 ~v~~~~~p~~l~W~~~gvDiVle~TG~f~s~e-----~a~~hl~aGakkVVISaps~--------~~dvP~vV~---gVN 223 (409)
... .+.+.+ .++|+||||.-.-...+ ....+...++ ++-|+.|. .-+-|-=+. =.|
T Consensus 383 ~~~--~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfn 454 (742)
T 3zwc_A 383 RFS--SSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFS 454 (742)
T ss_dssp EEE--SCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCS
T ss_pred ccc--CcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccC
Confidence 332 333333 27999999976544332 2234455566 66677652 111231111 223
Q ss_pred ccccCcCCCcEEecCCcchhhhHHHHHHHHhhcC
Q 015291 224 EKDYDHEVANIVSNASCTTNCLAPFVKVMDEELG 257 (409)
Q Consensus 224 ~~~~~~~~~~IISnaSCTTn~Lapvlk~L~~~fG 257 (409)
+-.+-+- -.||..+..+-..+.-+.... +..|
T Consensus 455 P~~~m~L-VEvi~g~~Ts~e~~~~~~~~~-~~lg 486 (742)
T 3zwc_A 455 PAHVMRL-LEVIPSRYSSPTTIATVMSLS-KKIG 486 (742)
T ss_dssp STTTCCE-EEEEECSSCCHHHHHHHHHHH-HHTT
T ss_pred CCCCCce-EEEecCCCCCHHHHHHHHHHH-HHhC
Confidence 3322221 347777777666666666544 3455
No 350
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=59.53 E-value=8.8 Score=35.41 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||-|-| +|-||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 4799999 8999999999998864 58877754
No 351
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=59.17 E-value=5.3 Score=39.02 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=20.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~ 108 (409)
|++||+|+|.|.+|..+...|...
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 456999999999999999988753
No 352
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=58.63 E-value=12 Score=36.41 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=23.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
-+|.|.|.|.||...++++..+. . +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G---a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG---ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 36999999999999999887653 3 677774
No 353
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=58.49 E-value=9.3 Score=35.56 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG---LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 5899999 9999999999998764 57877754
No 354
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=58.46 E-value=7.2 Score=38.84 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~-~vVaInd 120 (409)
.+|+|.|+|.||+.+++.|.... + +|+++|.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G---~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG---VRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 47999999999999999987653 4 7777765
No 355
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=58.18 E-value=67 Score=30.39 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
-||.|.|.|.+||.++..|.+.. -+|..+|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G---~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG---LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCC
Confidence 48999999999999999998764 467667764
No 356
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=57.75 E-value=9.8 Score=36.42 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=26.6
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+.+|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r 60 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKG---YEVHGLIR 60 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCC---CEEEEEec
Confidence 435899999 8999999999998764 58877754
No 357
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=57.72 E-value=10 Score=35.38 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=26.7
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+.+||.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 46 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVA 46 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeC
Confidence 357899999 9999999999998864 58887765
No 358
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=57.68 E-value=8.5 Score=36.81 Aligned_cols=31 Identities=16% Similarity=0.262 Sum_probs=24.2
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|+|.|.||...++++..+. ..+|+++..
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~ 204 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVS--AARVIAVDL 204 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC--CCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcC--CCEEEEEcC
Confidence 6999999999999998886542 257887753
No 359
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=57.44 E-value=9.4 Score=38.20 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=25.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|+|+|+|+||+.+++.+.... .+|++++-
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~v~D~ 203 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG---AIVRAFDT 203 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 468999999999999999988654 57666653
No 360
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=57.42 E-value=7.6 Score=35.40 Aligned_cols=25 Identities=12% Similarity=0.383 Sum_probs=21.8
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCC
Q 015291 85 AKLKVAING-FGRIGRNFLRCWHGRK 109 (409)
Q Consensus 85 m~ikVaInG-fGrIGr~vlr~l~~~~ 109 (409)
+++||.|.| +|.||+.+++.|.++.
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 357899999 9999999999998763
No 361
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=57.00 E-value=10 Score=35.42 Aligned_cols=31 Identities=26% Similarity=0.482 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEeC
Confidence 4899999 9999999999998764 58887753
No 362
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=56.11 E-value=11 Score=36.44 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=26.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG---HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC---CeEEEEEC
Confidence 35899999 8999999999998764 58877754
No 363
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=55.88 E-value=8.3 Score=37.34 Aligned_cols=29 Identities=17% Similarity=0.141 Sum_probs=23.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|+|.|.||...++++..+. . +|+++.
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~G---a~~Vi~~~ 222 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVCG---ASIIIAVD 222 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHHT---CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 7999999999999998876543 3 577664
No 364
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=55.56 E-value=24 Score=34.65 Aligned_cols=95 Identities=14% Similarity=0.050 Sum_probs=53.7
Q ss_pred eeEEEEc-CChhHHHHHHH--HHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeE--EEE
Q 015291 87 LKVAING-FGRIGRNFLRC--WHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKL--IKV 161 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~--l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~--I~v 161 (409)
.||-|.| +|+.++.+++. +.+| ++.+||+.-++..-. || +++.++.+. +++
T Consensus 11 tkviV~G~~Gk~~~~ml~~~~~~~r--~~~~vVagV~P~~~g-----------~~-----------~~v~~G~~~~Gvpv 66 (334)
T 3mwd_B 11 TKAIVWGMQTRAVQGMLDFDYVCSR--DEPSVAAMVYPFTGD-----------HK-----------QKFYWGHKEILIPV 66 (334)
T ss_dssp CCEEEESCCHHHHHHHHHHHHHTTC--SSCSEEEEECTTSCS-----------EE-----------EEEEETTEEEEEEE
T ss_pred CeEEEECCchHHHHHHHHhcccccC--CCceEEEEEcCCCCC-----------cc-----------ceEeccCccCCcee
Confidence 6899999 79988888876 3344 447888876651100 00 122233222 455
Q ss_pred EecCCCCCCCcccc-CccEEEeCCCCCCChhhHHHHHH-cCCCEEEE-eC
Q 015291 162 VSNRDPLQLPWAEL-GIDIVIEGTGVFVDGPGAGKHIQ-AGAKKVII-TA 208 (409)
Q Consensus 162 ~~~~~p~~l~W~~~-gvDiVle~TG~f~s~e~a~~hl~-aGakkVVI-Sa 208 (409)
+. +.++++= +. ++|+++.++......+.+...++ +|.+-||+ |.
T Consensus 67 y~--sv~ea~~-~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~ 113 (334)
T 3mwd_B 67 FK--NMADAMR-KHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE 113 (334)
T ss_dssp ES--SHHHHHH-HCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS
T ss_pred eC--CHHHHhh-cCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 42 2222210 11 57999888766444344445565 78887776 54
No 365
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=55.37 E-value=14 Score=36.00 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=27.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..||+|.|-|.+||.+++++.+.. ++++++..
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG---~~viv~d~ 43 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMG---YKVVVLDP 43 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 358999999999999999998764 78888853
No 366
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=55.01 E-value=17 Score=34.71 Aligned_cols=31 Identities=32% Similarity=0.358 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
-+|.|.|.|.||..+++++..+. .+|+++..
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G---a~Vi~~~~ 196 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG---LNVVAVDI 196 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 37999999999999999887664 47777653
No 367
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=54.92 E-value=7.3 Score=40.42 Aligned_cols=98 Identities=19% Similarity=0.199 Sum_probs=53.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc---eEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL---DVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~---~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~ 162 (409)
++||.|.|+|-||+.+++.+.++. ++ +|+.+ |..... ..+.+ - .|. ... ...++...+.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~--dv~~~~I~va-D~~~~~--~~~~~--~-~g~---~~~-----~~~Vdadnv~-- 74 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKF--DIKPSQVTII-AAEGTK--VDVAQ--Q-YGV---SFK-----LQQITPQNYL-- 74 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHB--CCCGGGEEEE-ESSCCS--CCHHH--H-HTC---EEE-----ECCCCTTTHH--
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC--CCceeEEEEe-ccchhh--hhHHh--h-cCC---cee-----EEeccchhHH--
Confidence 358999999999999999998763 24 55544 331110 01110 0 010 000 0001000000
Q ss_pred ecCCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEeC
Q 015291 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (409)
Q Consensus 163 ~~~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVISa 208 (409)
...+.+ -++ + |+||.++-.+.+..-++..+++|+ -.|+.
T Consensus 75 --~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDT 113 (480)
T 2ph5_A 75 --EVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINA 113 (480)
T ss_dssp --HHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEES
T ss_pred --HHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEEC
Confidence 001111 122 3 999998878888888999999999 55644
No 368
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=54.89 E-value=11 Score=37.17 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=25.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..||+|+|+|+||+.+++.+.... .+|++++-
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d~ 203 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLG---AVVMATDV 203 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 468999999999999999988664 46666653
No 369
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=54.75 E-value=24 Score=33.68 Aligned_cols=29 Identities=24% Similarity=0.134 Sum_probs=23.7
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+|.|+|.|.||...++++..+. .+|+++.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~ 199 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYG---AFVVCTA 199 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CEEEEEc
Confidence 7999999999999999887664 4666664
No 370
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=54.73 E-value=33 Score=34.98 Aligned_cols=83 Identities=14% Similarity=0.175 Sum_probs=51.2
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 87 ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
.||.|+|.|.+|.. +.+.|.++. .+|. +.|.........|-+ .| |++....
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G---~~V~-~~D~~~~~~~~~l~~---------------~g---------i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG---YQIS-GSDLAPNSVTQHLTA---------------LG---------AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT---CEEE-EECSSCCHHHHHHHH---------------TT---------CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC---CeEE-EEECCCCHHHHHHHH---------------CC---------CEEECCC
Confidence 48999999999996 899998875 4654 445422222222211 11 1222223
Q ss_pred CCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGa 201 (409)
+++++. ++|+|+=+.|.-.+........+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 444442 68999999998777666666666666
No 371
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=54.52 E-value=11 Score=38.56 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=26.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.|||+|+|.|.+|..+..+|.+.. .+|+.++-
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G---~~V~~~d~ 39 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG---HDVFCLDV 39 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CceEEEECcCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 579999999999999999998764 57777753
No 372
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=54.46 E-value=9.8 Score=37.84 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||+|.|.|.+|..+...|.+ . .+|++++-
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G---~~V~~~d~ 30 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q---NEVTIVDI 30 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T---SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHhC-C---CEEEEEEC
Confidence 489999999999999998875 4 58877753
No 373
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=54.46 E-value=22 Score=34.30 Aligned_cols=29 Identities=17% Similarity=0.343 Sum_probs=23.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|+|.|.||...++++..+. . +|+++.
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 223 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAG---AARIIGVD 223 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 7999999999999999887653 4 677764
No 374
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=54.38 E-value=13 Score=35.86 Aligned_cols=30 Identities=33% Similarity=0.288 Sum_probs=24.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaInd 120 (409)
+|.|+|.|.||...++++..+. . +|+++..
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~~ 204 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMG---AAQVVVTDL 204 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEECC
Confidence 7999999999999999887653 4 6777753
No 375
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=54.34 E-value=10 Score=35.33 Aligned_cols=33 Identities=27% Similarity=0.613 Sum_probs=26.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|-| +|.||+.+++.|.++. ...+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g-~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKH-PDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhC-CCCEEEEEec
Confidence 5899999 9999999999998752 1368877754
No 376
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=54.29 E-value=16 Score=35.21 Aligned_cols=31 Identities=10% Similarity=0.081 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHH-HHHH-HhCCCCCce-EEEEeC
Q 015291 87 LKVAINGFGRIGRNF-LRCW-HGRKDSPLD-VVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~v-lr~l-~~~~~~~~~-vVaInd 120 (409)
-+|.|+|.|.||... ++++ ..+. .+ |+++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G---a~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG---YENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC---CCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC---CcEEEEEeC
Confidence 479999999999999 8887 5443 45 777764
No 377
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=54.06 E-value=9.3 Score=38.38 Aligned_cols=32 Identities=13% Similarity=0.007 Sum_probs=25.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..||+|+|+|+||+.+++.+.... .+|++++-
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D~ 215 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLG---AKTTGYDV 215 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC---CEEEEEeC
Confidence 468999999999999999988654 47666543
No 378
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=54.03 E-value=11 Score=38.31 Aligned_cols=30 Identities=23% Similarity=0.294 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||+|.|.|.+|..+..+|.+ . .+|++++-
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G---~~V~~~D~ 66 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-N---HEVVALDI 66 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-T---SEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHc-C---CeEEEEec
Confidence 699999999999999998875 3 68887753
No 379
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=53.89 E-value=11 Score=36.11 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=25.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCC----CCceEEEEe
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKD----SPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~----~~~~vVaIn 119 (409)
+|||.|.| .|.||+.+++.|..+.. ...+|+.+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 47999999 69999999998886531 002677664
No 380
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=53.87 E-value=13 Score=35.21 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=24.9
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.| .|.||...++++..+. .+|+++..
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 181 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKG---AHTIAVAS 181 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 799999 9999999999888764 47777754
No 381
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=53.86 E-value=11 Score=37.08 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=24.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+|||+|.|.|.+|..+...|.+.. .+|..++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G---~~V~l~~ 59 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG---QKVRLWS 59 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 479999999999999999998653 3555454
No 382
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=53.85 E-value=8.2 Score=36.93 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=20.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~ 108 (409)
++||+|.|.|.+|..+...|...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 46999999999999999988754
No 383
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=53.63 E-value=9.8 Score=35.65 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.||+|.|.|.+|+.+++.|.+.. .+|..+|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g---~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG---AKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC---CEEEEEEC
Confidence 58999999999999999998753 47666664
No 384
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=53.56 E-value=18 Score=35.02 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=23.6
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|.|.|.||...++++..+. . +|+++.
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 227 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIAG---ASRIIAID 227 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 7999999999999999887653 4 677664
No 385
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=53.52 E-value=23 Score=34.59 Aligned_cols=24 Identities=17% Similarity=0.257 Sum_probs=20.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRK 109 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~ 109 (409)
.+||+|.|.|.||..++..+..+.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~ 42 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKD 42 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 469999999999999988877653
No 386
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=53.36 E-value=27 Score=35.33 Aligned_cols=92 Identities=14% Similarity=-0.008 Sum_probs=52.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEE-ecC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV-SNR 165 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~-~~~ 165 (409)
.+|.|+|.|++|...++.|.+.. -+|+.|..-... .+..|.+ ...+ .+. ..-
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g---a~V~vi~~~~~~-~~~~l~~----------------~~~i-------~~~~~~~ 65 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG---ARLTVNALTFIP-QFTVWAN----------------EGML-------TLVEGPF 65 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---BEEEEEESSCCH-HHHHHHT----------------TTSC-------EEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEcCCCCH-HHHHHHh----------------cCCE-------EEEECCC
Confidence 47999999999999999998764 355555432222 2222211 0111 111 112
Q ss_pred CCCCCCccccCccEEEeCCCCC-CChhhHHHHHHcCCCEEEEeCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVF-VDGPGAGKHIQAGAKKVIITAP 209 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f-~s~e~a~~hl~aGakkVVISap 209 (409)
++++++ +.|+||=|||.- ....-+....+.|..-.+++.|
T Consensus 66 ~~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 66 DETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp CGGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred CccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCc
Confidence 233332 789999999976 3545555556677642235555
No 387
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=53.28 E-value=13 Score=34.57 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED--HYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST--TCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC--CCEEEEEeC
Confidence 4799999 8999999999998762 258887764
No 388
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=53.12 E-value=17 Score=35.20 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=23.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|.|.|.||...++++..+. . +|+++.
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 223 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAG---ASRIIGVG 223 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 7999999999999998876543 3 676664
No 389
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=53.02 E-value=13 Score=34.35 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=25.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||-|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLDN 32 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 8999999999998764 57777643
No 390
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=52.90 E-value=12 Score=38.16 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=26.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R 179 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGG---HEVIQLVR 179 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 6899999 9999999999998864 58877764
No 391
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=52.83 E-value=12 Score=35.06 Aligned_cols=32 Identities=9% Similarity=0.158 Sum_probs=26.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+|||+|.|-| .|+.+++++.++. ++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G---~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEG---FETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTT---CCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhCC---CEEEEEEC
Confidence 56899999998 9999999998764 68777753
No 392
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=52.61 E-value=13 Score=35.04 Aligned_cols=31 Identities=29% Similarity=0.302 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD---QKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998764 57877754
No 393
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=52.51 E-value=13 Score=36.34 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|+|.|.|.||+.+++.+.... .+|++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G---a~V~~~d~ 197 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG---AQVTILDV 197 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 358999999999999999998764 47776653
No 394
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=52.31 E-value=7.7 Score=37.02 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=24.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|+|.|.||...++++..+. .+|+++..
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~ 198 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMG---LRVAAVDI 198 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 6899999999999999888764 48887753
No 395
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=52.27 E-value=11 Score=36.36 Aligned_cols=33 Identities=24% Similarity=0.196 Sum_probs=24.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+|||+|.| .|.||..++..|.++. .--+|+.+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g-~~~ev~l~D 41 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNP-LVSVLHLYD 41 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCT-TEEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CCCEEEEEe
Confidence 47999999 8999999999887653 112565553
No 396
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=52.04 E-value=14 Score=34.83 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG---DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 9999999999998764 58877754
No 397
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=51.95 E-value=14 Score=35.56 Aligned_cols=75 Identities=21% Similarity=0.216 Sum_probs=46.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEecC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~~ 165 (409)
..||||+|.|.+|..+.+.|. .. ++|+..|- +.+.+..+.+. +. +..+ + .++.. .
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG---~~V~v~d~--~~~~~~~~~~~------l~-------~~~~--~--~i~~~--~ 66 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SK---HEVVLQDV--SEKALEAAREQ------IP-------EELL--S--KIEFT--T 66 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS--CHHHHHHHHHH------SC-------GGGG--G--GEEEE--S
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cC---CEEEEEEC--CHHHHHHHHHH------HH-------HHHh--C--CeEEe--C
Confidence 458999999999999999988 64 68877764 34444444332 00 0000 0 12221 3
Q ss_pred CCCCCCccccCccEEEeCCCCCCC
Q 015291 166 DPLQLPWAELGIDIVIEGTGVFVD 189 (409)
Q Consensus 166 ~p~~l~W~~~gvDiVle~TG~f~s 189 (409)
+++.+ .++|+||||...-..
T Consensus 67 ~~~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 67 TLEKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp SCTTG----GGCSEEEECCCSCHH
T ss_pred CHHHH----cCCCEEEEcCcCCHH
Confidence 45432 379999999976543
No 398
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=51.73 E-value=14 Score=35.73 Aligned_cols=29 Identities=24% Similarity=0.312 Sum_probs=24.1
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+|.|.| .|.||...++++..+. .+|+++.
T Consensus 186 ~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~ 215 (375)
T 2vn8_A 186 RVLILGASGGVGTFAIQVMKAWD---AHVTAVC 215 (375)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 799999 8999999999887664 4777765
No 399
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=51.28 E-value=12 Score=38.40 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+|.|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP---VPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 58999999999999999998764 67777764
No 400
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=51.06 E-value=14 Score=31.87 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=24.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|||-|.| .|.||+.+++.|. +. .+|+++.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~ 33 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK---AEVITAG 33 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT---SEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEe
Confidence 5899999 9999999999998 64 5776664
No 401
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=50.94 E-value=14 Score=37.43 Aligned_cols=31 Identities=16% Similarity=0.101 Sum_probs=25.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
..||+|+|+|+||+.+++.+.... .+|++.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D 220 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG---AVVSATD 220 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC---CEEEEEc
Confidence 468999999999999999998764 4665543
No 402
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=50.90 E-value=18 Score=34.82 Aligned_cols=29 Identities=17% Similarity=0.265 Sum_probs=23.3
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|+|.|.||...++++.... . +|+++.
T Consensus 193 ~VlV~GaG~vG~~avqla~~~G---a~~Vi~~~ 222 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVAG---ASRIIGVD 222 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 7999999999999999887553 3 677764
No 403
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=50.80 E-value=11 Score=35.69 Aligned_cols=30 Identities=7% Similarity=0.029 Sum_probs=24.5
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.| .|.||...++++..+. .+|+++..
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 173 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKALG---AKLIGTVS 173 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 699999 9999999999887654 47777753
No 404
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=50.77 E-value=12 Score=35.62 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=24.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+||+|.|.|.+|..++..|..... .-+|+.++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~-~~~V~l~d 33 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV-ADDYVFID 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEc
Confidence 589999999999999998876531 12665554
No 405
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=50.71 E-value=19 Score=34.77 Aligned_cols=29 Identities=21% Similarity=0.394 Sum_probs=23.7
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~-~vVaIn 119 (409)
+|.|.|.|.||...++++..+. . +|+++.
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 224 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSAG---AKRIIAVD 224 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEc
Confidence 7999999999999999887653 4 677764
No 406
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=50.42 E-value=52 Score=30.22 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+.+|.|+|-|..|-..+..|.++. ++|+.|..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g---~~v~vie~ 34 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSG---LSYVILDA 34 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSS---CCEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 468999999999999999888764 57766754
No 407
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=50.40 E-value=15 Score=34.26 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=26.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+++|-|-| .|-||+.+++.|.++. .+|+++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG---YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEec
Confidence 46899999 9999999999998864 57777653
No 408
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=49.97 E-value=24 Score=36.16 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.||||+|.|.+|..+...+.... ++|+.++-
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG---~~V~l~D~ 85 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAG---IETFLVVR 85 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 58999999999999999988754 68776653
No 409
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=49.93 E-value=13 Score=35.60 Aligned_cols=31 Identities=32% Similarity=0.381 Sum_probs=23.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaI 118 (409)
++||+|.|.|.+|..+...|..... .+|+.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~--~~V~l~ 34 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNL--ADVVLF 34 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC--CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--ceEEEE
Confidence 4699999999999999998876531 265444
No 410
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=49.92 E-value=13 Score=36.32 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=24.5
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|+|.|.||...++++.... -.+|+++..
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~ 228 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLG--AENVIVIAG 228 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--BSEEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHHcC--CceEEEEcC
Confidence 7999999999999999887653 137777753
No 411
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=49.86 E-value=15 Score=35.65 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.||||+|.|.+|..+...+.... ++|+..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G---~~V~l~d 36 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG---FRVKLYD 36 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999999999999999988764 5776664
No 412
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=49.70 E-value=18 Score=34.02 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=24.3
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.| .|.||...++++..+. .+|+++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG---YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC---CEEEEEeC
Confidence 499999 5999999999888764 47887764
No 413
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=49.34 E-value=55 Score=32.72 Aligned_cols=88 Identities=27% Similarity=0.334 Sum_probs=53.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCC---hhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG---VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~~~---~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~ 163 (409)
.||.|+|.|..|..+.+.|.++. .+|.+. |... ......|-+ .| |++..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G---~~V~~~-D~~~~~~~~~~~~L~~---------------~g---------i~~~~ 61 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG---AIVTVN-DGKPFDENPTAQSLLE---------------EG---------IKVVC 61 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT---CEEEEE-ESSCGGGCHHHHHHHH---------------TT---------CEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEE-eCCcccCChHHHHHHh---------------CC---------CEEEE
Confidence 48999999999999999999875 465544 4311 111111110 11 11222
Q ss_pred cCCCCCCCccccC-ccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 164 NRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 164 ~~~p~~l~W~~~g-vDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
..+++++ +. + +|+|+=+.|.-.+........+.|.+ |++
T Consensus 62 g~~~~~~-~~--~~~d~vv~spgi~~~~p~~~~a~~~gi~--v~~ 101 (451)
T 3lk7_A 62 GSHPLEL-LD--EDFCYMIKNPGIPYNNPMVKKALEKQIP--VLT 101 (451)
T ss_dssp SCCCGGG-GG--SCEEEEEECTTSCTTSHHHHHHHHTTCC--EEC
T ss_pred CCChHHh-hc--CCCCEEEECCcCCCCChhHHHHHHCCCc--EEe
Confidence 2334322 11 4 89999999987777777777888874 554
No 414
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=49.31 E-value=13 Score=35.77 Aligned_cols=30 Identities=23% Similarity=0.533 Sum_probs=23.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~--~vVaIn 119 (409)
|||+|.|.|.+|..++..|.... + +|+.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g---~~~~V~l~D 32 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG---FAREMVLID 32 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCeEEEEe
Confidence 48999999999999998887643 3 666553
No 415
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=49.29 E-value=12 Score=35.00 Aligned_cols=33 Identities=24% Similarity=0.457 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|.|.| +|.||+.+++.|.++. +..+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~-~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhC-CCCEEEEEeC
Confidence 5899999 9999999999998752 1268877754
No 416
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=48.98 E-value=16 Score=34.06 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=25.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|||-|-| +|.||+.+++.|.++. .+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 4799999 9999999999998764 5777774
No 417
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=48.62 E-value=19 Score=36.02 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=24.1
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.| .|.||...++++.... .+++++..
T Consensus 231 ~VlV~GasG~vG~~avqlak~~G---a~vi~~~~ 261 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAGG---ANPICVVS 261 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHcC---CeEEEEEC
Confidence 699999 5999999999887664 57777653
No 418
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=48.45 E-value=8.3 Score=36.55 Aligned_cols=30 Identities=27% Similarity=0.383 Sum_probs=23.8
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.| .|.||...++++..+. .+|+++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 183 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG---YDVVASTG 183 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT---CCEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 699999 5999999999887654 46776654
No 419
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=47.60 E-value=14 Score=37.85 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.||||+|.|.+|..+...+.... ++|+..+-
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG---~~V~l~D~ 36 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG---HQVLLYDI 36 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 48999999999999999988754 57776653
No 420
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=47.45 E-value=14 Score=35.61 Aligned_cols=31 Identities=32% Similarity=0.374 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
-+|.|+|.|.||..+++++..+. .+|+++..
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 212 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG---LEVWMANR 212 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 37999999999999999887653 47777754
No 421
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=46.98 E-value=18 Score=34.68 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=26.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+||.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~r 43 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDN 43 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEEe
Confidence 36899999 9999999999998764 58887753
No 422
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=46.47 E-value=19 Score=34.18 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|||+|+|-|..|-.+...|..+. ++|+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G---~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG---IKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CCEEEEe
Confidence 69999999999999988888664 6776664
No 423
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=46.07 E-value=19 Score=33.53 Aligned_cols=33 Identities=24% Similarity=0.483 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhC-CCCC---ceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGR-KDSP---LDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~-~~~~---~~vVaInd 120 (409)
|||.|-| +|.||+.+++.|.++ . +. .+|+++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~-~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAY-PDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSC-TTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhc-CCCCceEEEEEEC
Confidence 4799999 999999999999874 2 13 57877754
No 424
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=46.05 E-value=20 Score=33.05 Aligned_cols=33 Identities=21% Similarity=0.133 Sum_probs=27.2
Q ss_pred ceeeEEEEcCCh---------hHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGR---------IGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGr---------IGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|++||+|.|-|. -|+.+++++.++. ++++.++.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G---~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG---IDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT---CEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC---CeEEEEec
Confidence 668999999887 7899999998764 78877763
No 425
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=45.89 E-value=16 Score=35.01 Aligned_cols=22 Identities=14% Similarity=0.132 Sum_probs=19.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~ 108 (409)
++|+|+|+|.+|+.+++.|...
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~ 157 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ 157 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHh
Confidence 5899999999999999988753
No 426
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=45.57 E-value=16 Score=37.51 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=28.6
Q ss_pred ccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 83 ~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..++.+|-|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~~---~~vvvid~ 158 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESRN---HLFVVVTD 158 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTTT---CCEEEEES
T ss_pred cccCCeEEEECCChHHHHHHHHHHHCC---CCEEEEEC
Confidence 345668999999999999999987654 68888865
No 427
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=45.55 E-value=12 Score=36.91 Aligned_cols=24 Identities=29% Similarity=0.304 Sum_probs=20.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRK 109 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~ 109 (409)
.-||.|+|.|.+|..++..|....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aG 141 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSG 141 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC
Confidence 358999999999999999988653
No 428
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=45.37 E-value=18 Score=33.96 Aligned_cols=31 Identities=23% Similarity=0.701 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQG---HEILVIDN 52 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGT---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 8999999999998764 57777754
No 429
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=45.34 E-value=4.2 Score=39.13 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=24.4
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|+| .|.||...++++..+. .+|+++..
T Consensus 153 ~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~ 183 (346)
T 3fbg_A 153 TLLIINGAGGVGSIATQIAKAYG---LRVITTAS 183 (346)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred EEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 699995 9999999999887654 48887753
No 430
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=45.09 E-value=20 Score=33.23 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG---YKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998864 58877754
No 431
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=44.85 E-value=21 Score=32.96 Aligned_cols=31 Identities=16% Similarity=0.358 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|-|-| .|.||+.+++.|.++. .+|+++..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQN---VEVFGTSR 44 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred ceEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 5799999 9999999999998764 58877754
No 432
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=44.81 E-value=16 Score=34.36 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=25.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~--g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT--QDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC--SCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcC--CCeEEEEec
Confidence 4799999 9999999999998751 258877754
No 433
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=44.53 E-value=36 Score=32.86 Aligned_cols=30 Identities=7% Similarity=-0.086 Sum_probs=24.2
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGf-GrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
-+|.|+|- |.||...++++..+. .+|+++.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~ 196 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG---YIPIATC 196 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence 37999995 999999999887664 4777774
No 434
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=44.35 E-value=21 Score=33.05 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG---YEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 8999999999998764 58877754
No 435
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=44.21 E-value=21 Score=33.63 Aligned_cols=31 Identities=16% Similarity=-0.005 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC---CeEEEEeC
Confidence 5899999 9999999999998764 57777754
No 436
>1o9a_B FNBB, fibronectin binding protein; cell adhesion/complex, HOST-pathogen protein complex, cell adhesion; NMR {Streptococcus dysgalactiae}
Probab=43.89 E-value=3.6 Score=27.05 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=15.8
Q ss_pred CceeeCCCeEEEEEEeCCCCC
Q 015291 387 LTMVMGDDMVKVVAWYDNEWG 407 (409)
Q Consensus 387 ~t~~~~~~~vKl~~WyDNE~g 407 (409)
+|..+.|..-||..-|||||-
T Consensus 13 sttevedskpk~sihfdnewp 33 (36)
T 1o9a_B 13 STTEVEDSKPKLSIHFDNEWP 33 (36)
T ss_dssp CCBCCCCSCCCCBCCCCCCCS
T ss_pred CceeeecCCcceEEeccCcCC
Confidence 445556667888889999994
No 437
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=43.81 E-value=12 Score=33.97 Aligned_cols=32 Identities=13% Similarity=0.355 Sum_probs=25.5
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
||.|.| +|.||+.+++.|.++. +..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKV-PASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhC-CCCeEEEEEc
Confidence 689999 8999999999998751 1267877764
No 438
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=43.73 E-value=86 Score=27.81 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=25.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
..+|.|+|-|..|-.....|.++. ++|+-|..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g---~~v~lie~ 34 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKG---VRVGLLTQ 34 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC---CCEEEEec
Confidence 468999999999999988888764 56666654
No 439
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=43.70 E-value=35 Score=32.47 Aligned_cols=31 Identities=6% Similarity=-0.109 Sum_probs=24.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
-+|.|.| .|.||+.+++++..+. .+|+++..
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~~ 199 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG---ARVIATAG 199 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEeC
Confidence 3799999 5999999999988764 47777653
No 440
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=43.67 E-value=22 Score=33.87 Aligned_cols=29 Identities=28% Similarity=0.345 Sum_probs=23.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEE
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVV 118 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~--~vVaI 118 (409)
+||+|.|.|.+|..++..|.... + +|+.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g---~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG---SCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCEEEEE
Confidence 48999999999999998887653 3 55544
No 441
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=43.57 E-value=21 Score=34.26 Aligned_cols=30 Identities=20% Similarity=0.220 Sum_probs=24.5
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|+| .|.||..+++++..+. .+|+++..
T Consensus 170 ~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~~ 200 (353)
T 4dup_A 170 SVLIHGGTSGIGTTAIQLARAFG---AEVYATAG 200 (353)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 799995 9999999999988764 47777753
No 442
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=43.47 E-value=30 Score=32.59 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=24.2
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+|.|+| .|.||...++++..+. .+|+++.
T Consensus 155 ~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~ 184 (321)
T 3tqh_A 155 VVLIHAGAGGVGHLAIQLAKQKG---TTVITTA 184 (321)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHHHcC---CEEEEEe
Confidence 699998 9999999999887664 4777775
No 443
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=43.40 E-value=21 Score=33.82 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=26.7
Q ss_pred eeeEEEEc-CChhHHHHHHHHHh--CCCCCceEEEEeC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHG--RKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~--~~~~~~~vVaInd 120 (409)
.++|-|-| .|-||+.+++.|.+ +. .+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEEC
Confidence 35899999 99999999999987 53 68887754
No 444
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=43.30 E-value=22 Score=34.57 Aligned_cols=30 Identities=33% Similarity=0.434 Sum_probs=23.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-~vVaI 118 (409)
++||+|.|.|.+|..+...|.... + +|+-+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~---~~~v~L~ 37 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKE---LGDVVLF 37 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 469999999999999998887654 3 65544
No 445
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=43.13 E-value=21 Score=36.80 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-~vVaInd 120 (409)
.+||+|.|.|.+|..+...|.+. +.. +|+.++-
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~--~G~~~V~~~D~ 51 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA--PCFEKVLGFQR 51 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS--TTCCEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHh--CCCCeEEEEEC
Confidence 36999999999999999999876 126 8877753
No 446
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=42.79 E-value=23 Score=34.21 Aligned_cols=25 Identities=24% Similarity=0.375 Sum_probs=21.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRK 109 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~ 109 (409)
|++||+|.|.|.+|..+..++....
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g 37 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKD 37 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC
Confidence 4569999999999999998888753
No 447
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=42.48 E-value=23 Score=33.81 Aligned_cols=31 Identities=32% Similarity=0.607 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHH-hCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~-~~~~~~~~vVaInd 120 (409)
|+|-|-| +|.||+.+++.|. ++. .+|+++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEec
Confidence 4899999 9999999999998 764 57877754
No 448
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=42.46 E-value=23 Score=33.40 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=25.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
++|-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 9999999999998764 57777754
No 449
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=41.84 E-value=20 Score=32.21 Aligned_cols=30 Identities=23% Similarity=0.473 Sum_probs=24.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|||.|.| +|.||+.+++.|.+ . .+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r 31 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVYN 31 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEES
T ss_pred CEEEEECCCChhHHHHHHHHhc-C---CeEEEecC
Confidence 3799999 99999999999984 2 57776653
No 450
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=41.80 E-value=48 Score=31.23 Aligned_cols=22 Identities=32% Similarity=0.392 Sum_probs=19.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRK 109 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~ 109 (409)
+|.|.|.|.||...++++....
T Consensus 163 ~VlV~GaG~vG~~aiq~ak~~G 184 (346)
T 4a2c_A 163 NVIIIGAGTIGLLAIQCAVALG 184 (346)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEECCCCcchHHHHHHHHcC
Confidence 6899999999999998887664
No 451
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=41.65 E-value=24 Score=33.78 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELG--VNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcC--CceEEEEEC
Confidence 5899999 9999999999998763 157877754
No 452
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=41.42 E-value=20 Score=35.35 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=27.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
+.||+|.|-|..||.+++++.+.. ++++++.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG---~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLN---IQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 468999999999999999998764 7888887
No 453
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=41.18 E-value=21 Score=34.30 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=20.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~ 108 (409)
++||+|.|.|.||..++..|..+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~ 28 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ 28 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 57999999999999999887754
No 454
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=41.14 E-value=28 Score=33.53 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=27.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+++||.|.|-|..|+.+++++.++. ++++++..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G---~~v~~~~~ 42 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLG---VEVIAVDR 42 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC---CEEEEEEC
Confidence 3469999999999999999998764 68888864
No 455
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=40.94 E-value=29 Score=34.44 Aligned_cols=31 Identities=23% Similarity=0.071 Sum_probs=24.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
-+|.|.| .|.||...++++.... .+++++..
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~~ 253 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG---GIPVAVVS 253 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 3699999 5999999999888764 47776653
No 456
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=40.84 E-value=20 Score=33.06 Aligned_cols=30 Identities=20% Similarity=0.442 Sum_probs=23.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+||-|-| +|-||+.+++.|.++. .+|++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g----~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN----EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS----CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC----CEEEEEc
Confidence 4899999 9999999999998753 5555643
No 457
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=40.61 E-value=26 Score=34.43 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=27.7
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+++||.|.|-|.+|+.+++++.++. ++++++..
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G---~~v~~v~~ 50 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLG---VEVVAVDR 50 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 3468999999999999999998764 78888864
No 458
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=40.59 E-value=16 Score=35.38 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=19.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGR 108 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~ 108 (409)
|||+|.| .|.||..++..|..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 5899999 999999999888764
No 459
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=40.55 E-value=21 Score=34.28 Aligned_cols=32 Identities=16% Similarity=0.330 Sum_probs=23.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaI 118 (409)
++||+|.|.|.||..++..|..... --+|+.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~-~~ev~l~ 37 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGI-ADEIVLI 37 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CCEEEEE
Confidence 4699999999999999988865431 1155554
No 460
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=40.46 E-value=27 Score=33.79 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=24.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaI 118 (409)
.+||+|.|.|.||..++..|..+.. .+|+-+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~--~~v~l~ 35 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQL--GDVVLF 35 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--ceEEEE
Confidence 3699999999999999988876542 166554
No 461
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=40.44 E-value=25 Score=35.68 Aligned_cols=30 Identities=27% Similarity=0.467 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.||||+|.|.+|..+...|.... ++|+.++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G---~~V~l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG---ISVVAVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEE
Confidence 58999999999999999988653 6877664
No 462
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=40.13 E-value=15 Score=34.93 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|.|.|+|++|+.+++.|.++. . +++|.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g---~-v~vid 144 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSE---V-FVLAE 144 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSC---E-EEEES
T ss_pred CCEEEECCcHHHHHHHHHHHhCC---c-EEEEe
Confidence 47999999999999999987753 5 77774
No 463
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=40.04 E-value=21 Score=34.72 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=23.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEE
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-~vVaI 118 (409)
.+||+|.|.|.||..++..|..+.. + +|+.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~--~~~l~l~ 36 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGI--TDELVVI 36 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC--CSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--CceEEEE
Confidence 4699999999999999998876531 2 55544
No 464
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=39.81 E-value=28 Score=33.47 Aligned_cols=31 Identities=23% Similarity=0.280 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.||+|.|-|..||.+++++.++. ++++++..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G---~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG---FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 38999999999999999998764 68887764
No 465
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=39.68 E-value=27 Score=31.86 Aligned_cols=32 Identities=25% Similarity=0.515 Sum_probs=25.3
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
||.|.| +|.||+.+++.|.++. ..+|+++...
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG--ITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT--CCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCC--CcEEEEEccC
Confidence 588999 8999999999998763 2477777643
No 466
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=39.45 E-value=26 Score=33.73 Aligned_cols=23 Identities=35% Similarity=0.288 Sum_probs=20.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~ 108 (409)
++||+|.|.|.||..++-.|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~ 29 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR 29 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 47999999999999999888765
No 467
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=39.32 E-value=32 Score=32.53 Aligned_cols=30 Identities=17% Similarity=0.114 Sum_probs=24.4
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.| .|.||+.+++++..+. .+|+++..
T Consensus 148 ~vlV~Ga~ggiG~~~~~~a~~~G---~~Vi~~~~ 178 (333)
T 1wly_A 148 YVLIHAAAGGMGHIMVPWARHLG---ATVIGTVS 178 (333)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 699999 7999999999988764 47777653
No 468
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=38.77 E-value=30 Score=31.82 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=24.5
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
||.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 32 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENG---YSVNTTI 32 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCC---CEEEEEE
Confidence 789999 9999999999998764 5777654
No 469
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=38.65 E-value=28 Score=32.78 Aligned_cols=33 Identities=24% Similarity=0.478 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
++|.|.| +|.||+.+++.|.++. ..+|+++...
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~ 80 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKG--ITDILVVDNL 80 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT--CCCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CcEEEEEecC
Confidence 5899999 8999999999998763 2477777643
No 470
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=38.56 E-value=20 Score=33.68 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=25.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCC--CCceEEEEeC
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKD--SPLDVVVVND 120 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~--~~~~vVaInd 120 (409)
+||.|.| +|.||+.+++.|.++.. ...+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 5899999 99999999999886530 0157777754
No 471
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=38.50 E-value=31 Score=32.98 Aligned_cols=30 Identities=17% Similarity=0.119 Sum_probs=26.4
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
||+|.|-|.-|+.+.+++.+.. +++++++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G---~~vv~vd~ 32 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAG---MKVVLVDK 32 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 8999999999999999988764 79999964
No 472
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=38.34 E-value=31 Score=33.50 Aligned_cols=30 Identities=7% Similarity=0.133 Sum_probs=23.7
Q ss_pred eEEEE--cCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAIN--GFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaIn--GfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|. |.|.||...++++..+. .+|+++..
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~~ 204 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKDG---IKLVNIVR 204 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHHT---CCEEEEES
T ss_pred EEEEECCCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 68998 79999999999887654 47777753
No 473
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=38.05 E-value=31 Score=33.64 Aligned_cols=31 Identities=26% Similarity=0.205 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
-+|.|.|.|.||+.+++.+.... .+|++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G---a~V~v~dr 198 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG---AQVQIFDI 198 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 58999999999999999998764 47777764
No 474
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=37.69 E-value=24 Score=36.93 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=19.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~ 108 (409)
.||||+|+|.+|+.+++.|...
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHH
T ss_pred CEEEEEeEhHHHHHHHHHHHhc
Confidence 4899999999999999998764
No 475
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=37.66 E-value=33 Score=32.00 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=20.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGR 108 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~ 108 (409)
.++|.|-| .|-||+.+++.|.++
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~ 37 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKD 37 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhc
Confidence 46899999 999999999999875
No 476
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=37.53 E-value=32 Score=33.26 Aligned_cols=29 Identities=34% Similarity=0.386 Sum_probs=23.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEE
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~-~vVaI 118 (409)
.||+|.|.|.+|..++..+.... + +|+-+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g---~~~v~l~ 38 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE---LADVVLV 38 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 58999999999999998887653 4 65544
No 477
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=37.26 E-value=28 Score=33.64 Aligned_cols=24 Identities=33% Similarity=0.303 Sum_probs=20.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRK 109 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~ 109 (409)
++||+|.|.|.+|..+...|....
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g 32 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRE 32 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 469999999999999999887643
No 478
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=36.94 E-value=26 Score=33.59 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=19.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~ 108 (409)
|||+|.|.|.+|..++..|...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~ 22 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN 22 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 5899999999999999888765
No 479
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=36.61 E-value=31 Score=33.59 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=24.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 88 kVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
||||+|.|.+|+.+...+.... ++|+.. |+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G---~~V~l~-D~ 37 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGG---FRVKLY-DI 37 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CCEEEE-CS
T ss_pred eEEEECCcHHHHHHHHHHHhCC---CeEEEE-EC
Confidence 7999999999999998887654 676544 54
No 480
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=36.24 E-value=30 Score=31.91 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=26.0
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+.+|.|+|-|.+|-.+...|..+. ++|+.|..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G---~~V~vlE~ 33 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAG---HQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCceEEEECCcHHHHHHHHHHHHCC---CcEEEEEC
Confidence 4568999999999999999888764 57766654
No 481
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=36.18 E-value=36 Score=29.97 Aligned_cols=30 Identities=20% Similarity=0.253 Sum_probs=24.9
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|-|.| .|-||+.+++.|.++. .+|+++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG---HTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 689999 8999999999998864 57776653
No 482
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=35.86 E-value=33 Score=34.84 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=27.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 86 ~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.+||||.|.|.+|..+..+|.+.. .+|++++-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G---~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG---HEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 589999999999999999998764 58877764
No 483
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=35.31 E-value=36 Score=32.30 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEeC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~-~vVaInd 120 (409)
.+|.|.|.|.+||.+++.|.+.. . +|+.+|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G---~~~V~v~nR 173 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA---AERIDMANR 173 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CSEEEEECS
T ss_pred CEEEEECcHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 47999999999999999998764 4 6666665
No 484
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=35.27 E-value=30 Score=30.38 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=24.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|-|.| .|-||+.+++.|.++. .+|+++.
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G---~~V~~~~ 33 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG---YRVVVLD 33 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC---CEEEEEc
Confidence 4789999 9999999999998764 4666654
No 485
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=35.25 E-value=30 Score=34.13 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=26.3
Q ss_pred cccccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 80 KKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 80 ~~~~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
.....|+.+|.|+|-|..|-.+...|..+. ++|+.|..
T Consensus 16 ~~~~~m~~~ViIVGaGpaGl~~A~~La~~G---~~V~viE~ 53 (430)
T 3ihm_A 16 PRGSHMKKRIGIVGAGTAGLHLGLFLRQHD---VDVTVYTD 53 (430)
T ss_dssp -------CEEEEECCHHHHHHHHHHHHHTT---CEEEEEES
T ss_pred cccCcCCCCEEEECCcHHHHHHHHHHHHCC---CeEEEEcC
Confidence 334457679999999999999998888764 67777764
No 486
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=34.93 E-value=34 Score=35.46 Aligned_cols=31 Identities=16% Similarity=0.377 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
.+|.|.|+|.||+.+.+.|.... ..|+. .|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G---A~Viv-~D~ 296 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG---ARVIV-TEI 296 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEE-ECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEE-EcC
Confidence 47999999999999999998764 46654 444
No 487
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=34.66 E-value=29 Score=32.33 Aligned_cols=30 Identities=23% Similarity=0.204 Sum_probs=25.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInG-fGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.+|-|-| .|-||+.+++.|.++. .+|+++-
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~ 36 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERG---YTVRATV 36 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCC---CEEEEEE
Confidence 4799999 9999999999998864 5777654
No 488
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=34.60 E-value=29 Score=32.69 Aligned_cols=30 Identities=7% Similarity=0.011 Sum_probs=24.3
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInG-fGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|.| .|.||+.+++++..+. .+|+++..
T Consensus 143 ~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~~ 173 (327)
T 1qor_A 143 QFLFHAAAGGVGLIACQWAKALG---AKLIGTVG 173 (327)
T ss_dssp EEEESSTTBHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 799999 8999999999887654 47776643
No 489
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=34.54 E-value=32 Score=33.04 Aligned_cols=33 Identities=15% Similarity=0.015 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd~ 121 (409)
.+|+|.|.|.+|+.++++|.+.. .++.|.|-+.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~~r 158 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVF--DIGEVKAYDV 158 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS--CCCEEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhC--CccEEEEECC
Confidence 58999999999999999987631 1455555554
No 490
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=34.18 E-value=36 Score=32.65 Aligned_cols=23 Identities=30% Similarity=0.359 Sum_probs=19.9
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCC
Q 015291 87 LKVAINGF-GRIGRNFLRCWHGRK 109 (409)
Q Consensus 87 ikVaInGf-GrIGr~vlr~l~~~~ 109 (409)
|||+|.|. |.||..++..|..+.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~ 24 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSP 24 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCT
T ss_pred CEEEEECCCChHHHHHHHHHHhCC
Confidence 48999996 999999999888653
No 491
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=34.18 E-value=34 Score=32.92 Aligned_cols=23 Identities=26% Similarity=0.366 Sum_probs=20.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhC
Q 015291 86 KLKVAING-FGRIGRNFLRCWHGR 108 (409)
Q Consensus 86 ~ikVaInG-fGrIGr~vlr~l~~~ 108 (409)
++||+|.| .|.||..++..|..+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~ 28 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANG 28 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhC
Confidence 57999999 599999999888765
No 492
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=34.12 E-value=37 Score=34.68 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=25.7
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 84 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.| -+|+|+|.|-||-.+.-++.+.. ++|+++.
T Consensus 20 ~m-~~IaViGlGYVGLp~A~~~A~~G---~~V~g~D 51 (444)
T 3vtf_A 20 HM-ASLSVLGLGYVGVVHAVGFALLG---HRVVGYD 51 (444)
T ss_dssp CC-CEEEEECCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CC-CEEEEEccCHHHHHHHHHHHhCC---CcEEEEE
Confidence 44 48999999999988888887654 6888873
No 493
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=33.74 E-value=46 Score=29.79 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=26.4
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 85 m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
|+.+|.|+|-|..|-..+..|.++. ++|+-|..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g---~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR---KNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC---CCEEEEeC
Confidence 5579999999999999998888764 56666653
No 494
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=33.72 E-value=43 Score=31.84 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
|||+|.|.|.+|..+...|..... ..+|+.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~-g~~V~l~D 32 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQL-ARELVLLD 32 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEe
Confidence 489999999999999988876421 24666553
No 495
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=33.68 E-value=39 Score=32.21 Aligned_cols=30 Identities=7% Similarity=0.115 Sum_probs=22.9
Q ss_pred eEEEE-cCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAIN-GFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaIn-GfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|-|. |.|.||...++++..+. .+|+++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G---a~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG---FRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46676 59999999999887654 47877753
No 496
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=32.71 E-value=25 Score=33.56 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=23.6
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 88 kVaInGf-GrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
+|.|+|. |.||...++++.... ...|+++..
T Consensus 145 ~VlV~Ga~G~vG~~a~qla~~~g--~~~V~~~~~ 176 (349)
T 4a27_A 145 SVLVHSAGGGVGQAVAQLCSTVP--NVTVFGTAS 176 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHTTST--TCEEEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHHHcC--CcEEEEeCC
Confidence 6999995 999999998876442 357777753
No 497
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=32.53 E-value=33 Score=33.40 Aligned_cols=22 Identities=23% Similarity=0.304 Sum_probs=19.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 015291 87 LKVAINGFGRIGRNFLRCWHGR 108 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~ 108 (409)
+||+|.|.|.||..++..|...
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~ 31 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ 31 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 6899999999999999888765
No 498
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=32.52 E-value=40 Score=33.51 Aligned_cols=30 Identities=23% Similarity=0.312 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 015291 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (409)
Q Consensus 87 ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaIn 119 (409)
.||+|.|-|.+||.+++++.+.. ++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG---~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMG---YRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEC
Confidence 48999999999999999998764 7888885
No 499
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=32.50 E-value=47 Score=31.26 Aligned_cols=36 Identities=11% Similarity=0.138 Sum_probs=27.9
Q ss_pred cccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 015291 82 ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (409)
Q Consensus 82 ~~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~~vVaInd 120 (409)
...+..+|.|+|-|.+|-.....|.++. ++|+.|..
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~G---~~V~llE~ 48 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKEN---KNTALFES 48 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhCC---CcEEEEeC
Confidence 3445679999999999999998888764 57776754
No 500
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=31.18 E-value=1.7e+02 Score=29.83 Aligned_cols=88 Identities=11% Similarity=0.044 Sum_probs=53.5
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCC-ChhhhhhhhcccccccccCceEEEecCCeEEECCeEEEEEec
Q 015291 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (409)
Q Consensus 87 ikVaInGfGrIGr~-vlr~l~~~~~~~~~vVaInd~~-~~~~~a~Ll~yDS~~G~f~~~v~~~~~~~l~v~gk~I~v~~~ 164 (409)
.||-++|.|.+|.. +.++|.++. .+|. +.|.. .......|-+ .| |.+...
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G---~~V~-~sD~~~~~~~~~~L~~---------------~g---------i~~~~G 71 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALG---HTVT-GSDANIYPPMSTQLEQ---------------AG---------VTIEEG 71 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEE-EEESCCCTTHHHHHHH---------------TT---------CEEEES
T ss_pred CEEEEEEecHhhHHHHHHHHHhCC---CEEE-EECCCCCcHHHHHHHH---------------CC---------CEEECC
Confidence 57999999999996 577777765 4654 44532 1111111111 11 122223
Q ss_pred CCCCCCCccccCccEEEeCCCCCCChhhHHHHHHcCCCEEEEe
Q 015291 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (409)
Q Consensus 165 ~~p~~l~W~~~gvDiVle~TG~f~s~e~a~~hl~aGakkVVIS 207 (409)
.+++++. .++|+|+=+.|.-.+........+.|.+ |++
T Consensus 72 ~~~~~~~---~~~d~vV~Spgi~~~~p~l~~a~~~gi~--v~~ 109 (524)
T 3hn7_A 72 YLIAHLQ---PAPDLVVVGNAMKRGMDVIEYMLDTGLR--YTS 109 (524)
T ss_dssp CCGGGGC---SCCSEEEECTTCCTTSHHHHHHHHHTCC--EEE
T ss_pred CCHHHcC---CCCCEEEECCCcCCCCHHHHHHHHCCCc--EEE
Confidence 3454442 2589999999988777777777788873 554
Done!