BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015293
(409 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225430700|ref|XP_002264259.1| PREDICTED: GTPase Era-like [Vitis vinifera]
Length = 435
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 296/332 (89%), Positives = 317/332 (95%), Gaps = 4/332 (1%)
Query: 82 SFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLS 137
+FLSLSEKPDRNMA DDYE+EE D+AS+PNH+S VLGKPNVGKSTLANQMIGQKLS
Sbjct: 104 TFLSLSEKPDRNMALLDDYELEELDFASNPNHRSGYVAVLGKPNVGKSTLANQMIGQKLS 163
Query: 138 IVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVV 197
IVT+KPQTTRHRILGICSGPEYQMILYDTPG+IEKK+H LDSMMMKNVRSA INADC+VV
Sbjct: 164 IVTDKPQTTRHRILGICSGPEYQMILYDTPGVIEKKMHKLDSMMMKNVRSATINADCVVV 223
Query: 198 LVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVI 257
LVDACK P++IDE+LEEGVG+ KDKLP LLVLNKKDLIKPGEIAKKLEWYEKF DVDEVI
Sbjct: 224 LVDACKEPQKIDEVLEEGVGNLKDKLPTLLVLNKKDLIKPGEIAKKLEWYEKFIDVDEVI 283
Query: 258 PVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPY 317
PVSAKYG GV+D++DWIL+KLPLGPAYYPKDIVSEHPERFFVGEI+REKIFMQYRNEVPY
Sbjct: 284 PVSAKYGQGVDDVKDWILSKLPLGPAYYPKDIVSEHPERFFVGEIVREKIFMQYRNEVPY 343
Query: 318 ACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKK 377
ACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK GKALKLLATAARLDIEDFLQKK
Sbjct: 344 ACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKEGKALKLLATAARLDIEDFLQKK 403
Query: 378 VYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
V+LE+EVKVKENWRQDEGLLK+YGYGGQIQAL
Sbjct: 404 VFLEVEVKVKENWRQDEGLLKYYGYGGQIQAL 435
>gi|255561072|ref|XP_002521548.1| GTP-binding protein era, putative [Ricinus communis]
gi|223539226|gb|EEF40819.1| GTP-binding protein era, putative [Ricinus communis]
Length = 443
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 303/408 (74%), Positives = 349/408 (85%), Gaps = 11/408 (2%)
Query: 8 SSSFGSLFPHYSTLTAYREIKFGFQGRSSSITC--RSNEHQSLVLSEKEVQQQKLWSNQR 65
S S +LF + R +FGFQ ++++ T SN+ Q L +K QQ L S
Sbjct: 41 SCSTTNLFRRRIRTSRRRRSEFGFQVKNNTNTVFFLSNDQQ---LQKK--QQHILVSEGE 95
Query: 66 EMDLDDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPN 121
D D+ +E E ++ ++ LSLS KP+RNMA DDYE+EE DYAS PNH+S V+GKPN
Sbjct: 96 FDDDDEEEEEEEEEETNTLSLSVKPERNMALLDDYELEELDYASDPNHRSGYVAVVGKPN 155
Query: 122 VGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMM 181
VGKSTL+NQMIGQKLSIVT+KPQTTRHRILGICSGP+YQM+LYDTPG+I+K++H LDSMM
Sbjct: 156 VGKSTLSNQMIGQKLSIVTDKPQTTRHRILGICSGPDYQMVLYDTPGVIQKQMHKLDSMM 215
Query: 182 MKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIA 241
MKNVR+A INADC++V+VDACK PE+IDE+LEEGVG KDK PILLVLNKKDLIKPGEIA
Sbjct: 216 MKNVRNAAINADCVLVIVDACKVPEKIDEVLEEGVGSLKDKPPILLVLNKKDLIKPGEIA 275
Query: 242 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 301
KKLEWYEKFTDVDEVIPVSAKYGHGVEDI+DWIL+KLP GPAYYPKDIVSEHPERFFV E
Sbjct: 276 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIKDWILSKLPFGPAYYPKDIVSEHPERFFVAE 335
Query: 302 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKL 361
I+REKIFMQ+RNEVPYACQVNVVSYK+RPTAKDFIQ+EIVVEKNSQKII+IGK G+ALKL
Sbjct: 336 IVREKIFMQFRNEVPYACQVNVVSYKSRPTAKDFIQMEIVVEKNSQKIIIIGKEGRALKL 395
Query: 362 LATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
LATA+RLDIEDFLQKKVYLEIEVKVK+NWRQDEGLL +YGYGG+I+AL
Sbjct: 396 LATASRLDIEDFLQKKVYLEIEVKVKDNWRQDEGLLNYYGYGGKIRAL 443
>gi|297735123|emb|CBI17485.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/320 (89%), Positives = 305/320 (95%), Gaps = 4/320 (1%)
Query: 94 MASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHR 149
MA DDYE+EE D+AS+PNH+S VLGKPNVGKSTLANQMIGQKLSIVT+KPQTTRHR
Sbjct: 1 MALLDDYELEELDFASNPNHRSGYVAVLGKPNVGKSTLANQMIGQKLSIVTDKPQTTRHR 60
Query: 150 ILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID 209
ILGICSGPEYQMILYDTPG+IEKK+H LDSMMMKNVRSA INADC+VVLVDACK P++ID
Sbjct: 61 ILGICSGPEYQMILYDTPGVIEKKMHKLDSMMMKNVRSATINADCVVVLVDACKEPQKID 120
Query: 210 EILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVED 269
E+LEEGVG+ KDKLP LLVLNKKDLIKPGEIAKKLEWYEKF DVDEVIPVSAKYG GV+D
Sbjct: 121 EVLEEGVGNLKDKLPTLLVLNKKDLIKPGEIAKKLEWYEKFIDVDEVIPVSAKYGQGVDD 180
Query: 270 IRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR 329
++DWIL+KLPLGPAYYPKDIVSEHPERFFVGEI+REKIFMQYRNEVPYACQVNVVSYKTR
Sbjct: 181 VKDWILSKLPLGPAYYPKDIVSEHPERFFVGEIVREKIFMQYRNEVPYACQVNVVSYKTR 240
Query: 330 PTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKEN 389
PTAKDFIQVEIVVEKNSQKIILIGK GKALKLLATAARLDIEDFLQKKV+LE+EVKVKEN
Sbjct: 241 PTAKDFIQVEIVVEKNSQKIILIGKEGKALKLLATAARLDIEDFLQKKVFLEVEVKVKEN 300
Query: 390 WRQDEGLLKHYGYGGQIQAL 409
WRQDEGLLK+YGYGGQIQAL
Sbjct: 301 WRQDEGLLKYYGYGGQIQAL 320
>gi|449457520|ref|XP_004146496.1| PREDICTED: GTPase Era-like [Cucumis sativus]
gi|449529894|ref|XP_004171933.1| PREDICTED: GTPase Era-like [Cucumis sativus]
Length = 433
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/336 (83%), Positives = 308/336 (91%), Gaps = 4/336 (1%)
Query: 78 DDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIG 133
DD SFLSL+EKPDRN+ DDYE+EE Y NH+S ++GKPNVGKSTL NQ+IG
Sbjct: 98 DDELSFLSLNEKPDRNLTLLDDYEMEELGYPCDLNHRSGYAALVGKPNVGKSTLVNQLIG 157
Query: 134 QKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINAD 193
QKLSIVT+KPQTTRHRILGICSGPEYQ+ILYDTPG+IEKK+H LD+MMMKNVRSA +NAD
Sbjct: 158 QKLSIVTDKPQTTRHRILGICSGPEYQVILYDTPGVIEKKMHKLDTMMMKNVRSAAVNAD 217
Query: 194 CIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDV 253
C++V+VDACKAP++IDEILE GVGD K+ P LLVLNKKDLIKPGEIAKKLEWYEKFT+V
Sbjct: 218 CVLVVVDACKAPQKIDEILEGGVGDLKEMPPTLLVLNKKDLIKPGEIAKKLEWYEKFTNV 277
Query: 254 DEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRN 313
DEVIPVSAKYGHG+ED+R+WIL+KLPLGPAYYPKDIVSEHPERFFV EI+REKIFMQYRN
Sbjct: 278 DEVIPVSAKYGHGIEDVREWILSKLPLGPAYYPKDIVSEHPERFFVSEIVREKIFMQYRN 337
Query: 314 EVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDF 373
EVPYACQVNVVSYK+RP AKDFIQ EIVVEKNSQKIILIGK GKALKLLATAARLDIEDF
Sbjct: 338 EVPYACQVNVVSYKSRPGAKDFIQTEIVVEKNSQKIILIGKEGKALKLLATAARLDIEDF 397
Query: 374 LQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
LQKKVYLEIEVKVKENWRQDEGLLKHYGY G+IQAL
Sbjct: 398 LQKKVYLEIEVKVKENWRQDEGLLKHYGYEGRIQAL 433
>gi|22328152|ref|NP_201448.2| GTP-binding protein Era [Arabidopsis thaliana]
gi|17473914|gb|AAL38371.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|20259794|gb|AAM13244.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332010835|gb|AED98218.1| GTP-binding protein Era [Arabidopsis thaliana]
Length = 427
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 287/410 (70%), Positives = 333/410 (81%), Gaps = 24/410 (5%)
Query: 15 FPHYSTLTAYREIKFGFQGRSSSITCRSNEHQSLVLSEKEVQQQKLWSNQR---EMDL-- 69
F Y + R K Q +S+ + E S +KLW QR EM++
Sbjct: 27 FSPYRIYSRRRVTKSHLQAHNSTTSYGRTELSS---------SKKLWIRQRSFSEMEVEQ 77
Query: 70 ----DDGDEMEFD--DASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGK 119
DD +++E D D +S LSLS KPDRNMA DDYE+EE + + +H+S V+G
Sbjct: 78 AQLEDDEEQVEIDIVDEASLLSLSMKPDRNMALLDDYEMEELGHTPNTHHRSGYVAVVGM 137
Query: 120 PNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDS 179
PNVGKSTL+NQMIGQK+SIVT+KPQTTRHRILGICS PEYQMILYDTPG+IEKK+H LD+
Sbjct: 138 PNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHRLDT 197
Query: 180 MMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGE 239
MMMKNVR A INADC+V+LVDACK P I+E+L+EG+GD + K P+LLV+NKKDLIKPGE
Sbjct: 198 MMMKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGDLEKKPPMLLVMNKKDLIKPGE 257
Query: 240 IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFV 299
IAKKLEWYEKFTDVDEVIPVSAKYGHG+ED+++WIL+KLP GP YYPKDIVSEHPERFFV
Sbjct: 258 IAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWILSKLPFGPPYYPKDIVSEHPERFFV 317
Query: 300 GEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKAL 359
EI+REKIFMQYRNEVPYACQVNV+SYKTRP AKDFIQVE+VV+KNSQKIILIGK GKAL
Sbjct: 318 SEIVREKIFMQYRNEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGKEGKAL 377
Query: 360 KLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
K LATAARLDIEDFLQKKV+LE+EVKVKENWRQDEGLLK+YGYGGQI+A+
Sbjct: 378 KTLATAARLDIEDFLQKKVFLEVEVKVKENWRQDEGLLKYYGYGGQIRAM 427
>gi|224097032|ref|XP_002310817.1| predicted protein [Populus trichocarpa]
gi|222853720|gb|EEE91267.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 278/333 (83%), Positives = 306/333 (91%), Gaps = 6/333 (1%)
Query: 83 FLSLSEKPDRNMASPDDYEIEEFDY--ASHPNHKS----VLGKPNVGKSTLANQMIGQKL 136
LSLS KPDRN A DDYEIEE + +S+ NH+S V+GKPNVGKSTL+NQMIGQKL
Sbjct: 82 LLSLSVKPDRNTALLDDYEIEELAFHDSSNSNHRSGYVAVVGKPNVGKSTLSNQMIGQKL 141
Query: 137 SIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIV 196
SIVT+KPQTTRHRILGICS P+YQMILYDTPG+IEKK+H LDSMMMKNVRSA INADC++
Sbjct: 142 SIVTDKPQTTRHRILGICSAPDYQMILYDTPGVIEKKMHKLDSMMMKNVRSAAINADCVL 201
Query: 197 VLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEV 256
V+VDAC+APE+IDE+LEEGVG+ KD +P LLVLNKKDLIKPGEIAKKLEWYEKFT VDEV
Sbjct: 202 VIVDACRAPEKIDEMLEEGVGNLKDNVPTLLVLNKKDLIKPGEIAKKLEWYEKFTGVDEV 261
Query: 257 IPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVP 316
IPVSAK+G GVEDI++WIL+KLP+GPAYYPKDIVSEHPERFFV EI+REKIFMQ+RNEVP
Sbjct: 262 IPVSAKFGQGVEDIKEWILSKLPMGPAYYPKDIVSEHPERFFVAEIVREKIFMQFRNEVP 321
Query: 317 YACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQK 376
YACQVNVV YK RPTAKDFIQVEIVVEKN+QKII+IGK GKALKLLATAARLDIEDFLQK
Sbjct: 322 YACQVNVVGYKARPTAKDFIQVEIVVEKNTQKIIIIGKEGKALKLLATAARLDIEDFLQK 381
Query: 377 KVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
KVYLEIEVKVKENWRQDEGLLK+YGYGGQI AL
Sbjct: 382 KVYLEIEVKVKENWRQDEGLLKYYGYGGQISAL 414
>gi|78499699|gb|ABB45853.1| hypothetical protein [Eutrema halophilum]
Length = 429
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/437 (66%), Positives = 336/437 (76%), Gaps = 36/437 (8%)
Query: 1 MELGVHISSSFG--SLF-------PHYSTLTAY----REIKFGFQGRSSSITCRSNEHQS 47
M + HIS S F P++ST Y R K Q SS+ S
Sbjct: 1 MAVSQHISPSLSRYKFFSTSVVENPNFSTYHIYSRRSRVTKSHLQAHSST--------SS 52
Query: 48 LVLSEKEVQQQKLWSNQREMDLDD-----------GDEMEFDDASSFLSLSEKPDRNMAS 96
+E +KLW QR + ++++ D +S LSLS KPDRNMA
Sbjct: 53 YGRTELAASAKKLWIRQRSFSETEVEQGQFEDEEEQEDIDISDEASLLSLSMKPDRNMAL 112
Query: 97 PDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILG 152
DDYE+EE + NH+S VLG PNVGKSTL+NQMIGQK+SIVT+KPQTTRHRILG
Sbjct: 113 LDDYEMEELGHTPDTNHRSGYVAVLGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILG 172
Query: 153 ICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEIL 212
ICS PEYQMILYDTPG+IEKK+H LD+MMMKNVR A INADC+VVLVDACK P I+E+L
Sbjct: 173 ICSSPEYQMILYDTPGVIEKKMHRLDTMMMKNVRDAAINADCVVVLVDACKMPANIEEVL 232
Query: 213 EEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRD 272
+EG+G+ + + P+LLV+NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVED+++
Sbjct: 233 KEGLGNLEKRPPMLLVMNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDVKE 292
Query: 273 WILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA 332
WIL+KLP GP YYPKDIVSEHPERFFV EI+REKIFMQYRNEVPYACQVNV+SYKTRP A
Sbjct: 293 WILSKLPFGPPYYPKDIVSEHPERFFVAEIVREKIFMQYRNEVPYACQVNVLSYKTRPAA 352
Query: 333 KDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQ 392
KDFIQVE+VV+KNSQKIILIGK GKALK LATAARLDIEDFLQKKV+LE+EVKVKENWRQ
Sbjct: 353 KDFIQVEVVVDKNSQKIILIGKEGKALKTLATAARLDIEDFLQKKVFLEVEVKVKENWRQ 412
Query: 393 DEGLLKHYGYGGQIQAL 409
DEGLLK+YGYGGQI+A+
Sbjct: 413 DEGLLKYYGYGGQIRAM 429
>gi|312190415|gb|ADQ43214.1| GTP binding protein [Eutrema parvulum]
Length = 426
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 283/411 (68%), Positives = 336/411 (81%), Gaps = 26/411 (6%)
Query: 16 PHYSTL---TAYREIKFGFQGRSSSITCRSNEHQSLVLSEKEVQQQKLWSNQR---EMDL 69
P++S + R K Q ++S+I+ E S +KLW QR EM++
Sbjct: 25 PNFSPFHIDSRRRLTKSHLQAQNSTISYGRTELAS---------SKKLWIRQRSFSEMEV 75
Query: 70 DDG--------DEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS---VLG 118
+ G ++++ D +S LSLS KPDRNMA DDYE+EE + NH+S V+G
Sbjct: 76 EQGRLEDEEEQEDIDIGDEASLLSLSMKPDRNMALLDDYEMEELGHTPDTNHRSYVAVVG 135
Query: 119 KPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLD 178
PNVGKSTL+NQMIGQK+SIVT+KPQTTRHRILGICS PEYQMIL+DTPG+IEKK+H LD
Sbjct: 136 MPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILFDTPGVIEKKMHRLD 195
Query: 179 SMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPG 238
+MMMKNVR A INADC+V+LVDACK P +I+E+L+EG+GD + + P+LLV+NKKDLIKPG
Sbjct: 196 TMMMKNVRDAAINADCVVILVDACKTPAKIEEVLKEGLGDLEKRPPMLLVMNKKDLIKPG 255
Query: 239 EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFF 298
EIAKKLEWYEKFTDVDEVIPVSAKYGHG+ED+++WIL+KLP GP YYPKDIVSEHPERFF
Sbjct: 256 EIAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWILSKLPFGPPYYPKDIVSEHPERFF 315
Query: 299 VGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKA 358
V EI+REKIFMQYRNEVPYACQVNV+SYKTRP AKDFIQVE+VV+KNSQKIILIGK GKA
Sbjct: 316 VAEIVREKIFMQYRNEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGKEGKA 375
Query: 359 LKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
LK LATAARLDIEDFLQKKV+LE++VKVKENWRQDEGLLK+YGYGGQI+A+
Sbjct: 376 LKTLATAARLDIEDFLQKKVFLEVDVKVKENWRQDEGLLKYYGYGGQIRAM 426
>gi|297794363|ref|XP_002865066.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297310901|gb|EFH41325.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 427
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/335 (80%), Positives = 303/335 (90%), Gaps = 4/335 (1%)
Query: 79 DASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQ 134
D +S LSLS KPDRNMA DDYE+EE + +H+S VLG PNVGKSTL+NQMIGQ
Sbjct: 93 DEASLLSLSMKPDRNMALLDDYEMEELGHTPDTHHRSGYVAVLGMPNVGKSTLSNQMIGQ 152
Query: 135 KLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADC 194
K+SIVT+KPQTTRHRILGICS PEYQMILYDTPG+IEKK+H LD+MMMKNVR A INADC
Sbjct: 153 KISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHRLDTMMMKNVRDAAINADC 212
Query: 195 IVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD 254
+V+LVDACK P I+E+L+EG+G+ + K P+LLV+NKKDLIKPGEIAKKLEWYEKFTDVD
Sbjct: 213 VVILVDACKTPTYIEEVLKEGLGNLEKKPPMLLVMNKKDLIKPGEIAKKLEWYEKFTDVD 272
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 314
EVIPVSAKYGHG+ED+++WIL+KLP GP YYPKDIVSEHPERFFV EI+REKIFMQYRNE
Sbjct: 273 EVIPVSAKYGHGIEDVKEWILSKLPFGPPYYPKDIVSEHPERFFVSEIVREKIFMQYRNE 332
Query: 315 VPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFL 374
VPYACQVNV+SYKTRP AKDFIQVE+VV+KNSQKIILIGK GKALK LATAARLDIEDFL
Sbjct: 333 VPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGKEGKALKTLATAARLDIEDFL 392
Query: 375 QKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
QKKV+LE+EVKVKENWRQDEGLLK+YGYGGQI+A+
Sbjct: 393 QKKVFLEVEVKVKENWRQDEGLLKYYGYGGQIRAM 427
>gi|356502167|ref|XP_003519892.1| PREDICTED: GTPase Era-like [Glycine max]
Length = 421
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/331 (79%), Positives = 300/331 (90%), Gaps = 4/331 (1%)
Query: 83 FLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSI 138
FLSLS+KPDRNMA DDYE EE D+ P+H+S +LGKPNVGKSTLANQM+GQKLSI
Sbjct: 91 FLSLSDKPDRNMALLDDYEGEELDFEFGPDHRSGYVTLLGKPNVGKSTLANQMLGQKLSI 150
Query: 139 VTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVL 198
VT+KPQTTRHRIL ICSG +YQMILYD PG+++K++H LDSMMMKNVRSA +NADC++VL
Sbjct: 151 VTDKPQTTRHRILCICSGEDYQMILYDKPGVLQKEMHKLDSMMMKNVRSAAVNADCVLVL 210
Query: 199 VDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIP 258
VDA KAPE+ID +LEEG+GD KDK P LL+LNKKDL+KPGE+AKKLEWYEK TDVDEVIP
Sbjct: 211 VDARKAPEKIDGLLEEGIGDLKDKPPTLLILNKKDLVKPGELAKKLEWYEKLTDVDEVIP 270
Query: 259 VSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYA 318
VSAKYG GVED++DWIL+KLP GPAYYPKDIVSEHPERFFV EI+REKIFMQYRNE+PYA
Sbjct: 271 VSAKYGQGVEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYA 330
Query: 319 CQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKV 378
CQVNVV+YK RP AK++IQVEI+VEKNSQKIILIG+ GKALKLLATAARLD+EDFLQKKV
Sbjct: 331 CQVNVVNYKARPNAKEYIQVEILVEKNSQKIILIGREGKALKLLATAARLDVEDFLQKKV 390
Query: 379 YLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
YLEIEVKV+ NWRQDEGLL HYGYGGQI+ +
Sbjct: 391 YLEIEVKVRANWRQDEGLLNHYGYGGQIRVI 421
>gi|356559363|ref|XP_003547969.1| PREDICTED: GTPase Era-like [Glycine max]
Length = 428
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/325 (79%), Positives = 296/325 (91%), Gaps = 4/325 (1%)
Query: 89 KPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQ 144
KPDRNMA DDYE EE D+ P+H+S +LGKPNVGKSTLANQM+GQKLSIVT+KPQ
Sbjct: 104 KPDRNMAMLDDYEGEELDFDYGPDHRSGYVALLGKPNVGKSTLANQMLGQKLSIVTDKPQ 163
Query: 145 TTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA 204
TTRHRIL ICSG +YQMILYDTPG+++K++H+LDSMMMKNVRSA +NADC++VLVDA K
Sbjct: 164 TTRHRILCICSGTDYQMILYDTPGVLQKEMHLLDSMMMKNVRSAAVNADCVLVLVDARKT 223
Query: 205 PERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYG 264
PE+ID +LEEG+GD KDK P LL+LNKKDL+KPGE+AKKLEWYEKFT+VDEVIPVSAKYG
Sbjct: 224 PEKIDGLLEEGIGDLKDKPPTLLILNKKDLVKPGELAKKLEWYEKFTEVDEVIPVSAKYG 283
Query: 265 HGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV 324
GVED++DWIL+KLP GPAYYPKDIVSEHPERFFV EI+REKIFMQYRNE+PYACQVNVV
Sbjct: 284 QGVEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVV 343
Query: 325 SYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEV 384
+YK RP AK++IQVEI+VEKN+QKIILIG+ GKALKLLATAARLD+EDFLQKKVYLEIEV
Sbjct: 344 NYKARPNAKEYIQVEILVEKNTQKIILIGREGKALKLLATAARLDVEDFLQKKVYLEIEV 403
Query: 385 KVKENWRQDEGLLKHYGYGGQIQAL 409
KV+ NWRQDEGLL HYGYGGQI+ +
Sbjct: 404 KVRANWRQDEGLLNHYGYGGQIRVI 428
>gi|10177528|dbj|BAB10923.1| GTP-binding protein-like [Arabidopsis thaliana]
Length = 353
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/311 (81%), Positives = 286/311 (91%)
Query: 99 DYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPE 158
D+E E DY + + +V+G PNVGKSTL+NQMIGQK+SIVT+KPQTTRHRILGICS PE
Sbjct: 43 DWETEFGDYGCYIGYVAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPE 102
Query: 159 YQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD 218
YQMILYDTPG+IEKK+H LD+MMMKNVR A INADC+V+LVDACK P I+E+L+EG+GD
Sbjct: 103 YQMILYDTPGVIEKKMHRLDTMMMKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGD 162
Query: 219 HKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 278
+ K P+LLV+NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHG+ED+++WIL+KL
Sbjct: 163 LEKKPPMLLVMNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWILSKL 222
Query: 279 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 338
P GP YYPKDIVSEHPERFFV EI+REKIFMQYRNEVPYACQVNV+SYKTRP AKDFIQV
Sbjct: 223 PFGPPYYPKDIVSEHPERFFVSEIVREKIFMQYRNEVPYACQVNVLSYKTRPAAKDFIQV 282
Query: 339 EIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLK 398
E+VV+KNSQKIILIGK GKALK LATAARLDIEDFLQKKV+LE+EVKVKENWRQDEGLLK
Sbjct: 283 EVVVDKNSQKIILIGKEGKALKTLATAARLDIEDFLQKKVFLEVEVKVKENWRQDEGLLK 342
Query: 399 HYGYGGQIQAL 409
+YGYGGQI+A+
Sbjct: 343 YYGYGGQIRAM 353
>gi|102139740|gb|ABF69947.1| GTPase family protein [Musa acuminata]
Length = 305
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 248/297 (83%), Positives = 282/297 (94%)
Query: 113 HKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEK 172
+ +VLG+PNVGKSTL+NQMIGQKLSIVT KPQTTRHRILGICSGPEYQMILYDTPG+IEK
Sbjct: 9 YVAVLGRPNVGKSTLSNQMIGQKLSIVTEKPQTTRHRILGICSGPEYQMILYDTPGVIEK 68
Query: 173 KIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKK 232
K+HMLDSMMMKNVRSA INADC++V+VDACK P +ID++LEEG+G +D LPILLVLNKK
Sbjct: 69 KMHMLDSMMMKNVRSAAINADCVLVVVDACKVPHKIDDVLEEGIGTLRDNLPILLVLNKK 128
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DLIKPGEIAK+LEWY+KFT+VD+VIPVSAK+G GV+D++DWIL+KLP GPAYYPKDI SE
Sbjct: 129 DLIKPGEIAKRLEWYQKFTNVDDVIPVSAKFGQGVDDVKDWILSKLPFGPAYYPKDIASE 188
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
HPERFFV EI+REKIF QYRNEVPYACQVNV++Y +RPT+KDFIQVEIVVEK SQKIILI
Sbjct: 189 HPERFFVAEIVREKIFTQYRNEVPYACQVNVLNYISRPTSKDFIQVEIVVEKESQKIILI 248
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
GKGGKALK+LATAARLDIEDFLQKKV+LE+EVKVKENWRQDEGLL++YGYGGQI+AL
Sbjct: 249 GKGGKALKVLATAARLDIEDFLQKKVFLEVEVKVKENWRQDEGLLRYYGYGGQIRAL 305
>gi|222632589|gb|EEE64721.1| hypothetical protein OsJ_19577 [Oryza sativa Japonica Group]
Length = 423
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/330 (76%), Positives = 296/330 (89%), Gaps = 4/330 (1%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIV 139
L L EKPDR++ D+YE EE + NH+S VLGKPNVGKSTL NQ++GQKLSIV
Sbjct: 94 LELIEKPDRSLCLLDEYESEELGTSHCANHRSGYVAVLGKPNVGKSTLINQIVGQKLSIV 153
Query: 140 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 199
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LD+MMMKNVRSA +ADC++V+V
Sbjct: 154 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDTMMMKNVRSAVGSADCVLVVV 213
Query: 200 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 259
DACK PE+IDEILEEGVG+ +LP+LLVLNKKDLIKPGEIAKKLEWY+KFT+ D+VIP+
Sbjct: 214 DACKMPEKIDEILEEGVGNKDTELPVLLVLNKKDLIKPGEIAKKLEWYQKFTNADDVIPI 273
Query: 260 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 319
SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PYAC
Sbjct: 274 SAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYRQEIPYAC 333
Query: 320 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVY 379
QVNV+SYK+RPTAKDFIQVEI+VEK SQ+ I++GK GKA+K+LATA+RLDIEDFLQKKVY
Sbjct: 334 QVNVISYKSRPTAKDFIQVEILVEKESQRSIILGKDGKAIKMLATASRLDIEDFLQKKVY 393
Query: 380 LEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
LEI VKVKENWRQDE LLK YGYGG+IQAL
Sbjct: 394 LEIMVKVKENWRQDELLLKRYGYGGEIQAL 423
>gi|125553352|gb|EAY99061.1| hypothetical protein OsI_21018 [Oryza sativa Indica Group]
Length = 423
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/330 (76%), Positives = 296/330 (89%), Gaps = 4/330 (1%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIV 139
L L EKPDR++ D+YE EE + NH+S VLGKPNVGKSTL NQ++GQKLSIV
Sbjct: 94 LELIEKPDRSLCLLDEYESEELGTSHCANHRSGYVAVLGKPNVGKSTLINQIVGQKLSIV 153
Query: 140 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 199
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LD+MMMKNVRSA +ADC++V+V
Sbjct: 154 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDTMMMKNVRSAVGSADCVLVVV 213
Query: 200 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 259
DACK PE+IDEILEEGVG+ +LP+LLVLNKKDLIKPGEIAKKLEWY+KFT+ D+VIP+
Sbjct: 214 DACKMPEKIDEILEEGVGNKDTELPVLLVLNKKDLIKPGEIAKKLEWYQKFTNADDVIPI 273
Query: 260 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 319
SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PYAC
Sbjct: 274 SAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYRQEIPYAC 333
Query: 320 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVY 379
QVNV+SYK+RPTAKDFIQVEI+VEK SQ+ I++GK GKA+K+LATA+RLDIEDFLQKKVY
Sbjct: 334 QVNVISYKSRPTAKDFIQVEILVEKESQRSIILGKDGKAIKMLATASRLDIEDFLQKKVY 393
Query: 380 LEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
LEI VKVKENWRQDE LLK YGYGG+IQAL
Sbjct: 394 LEIMVKVKENWRQDELLLKRYGYGGEIQAL 423
>gi|413948515|gb|AFW81164.1| GTP-binding protein era [Zea mays]
Length = 416
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/330 (76%), Positives = 296/330 (89%), Gaps = 4/330 (1%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIV 139
L L EKPDR++A D+YE EE + NH+S VLGKPNVGKSTL NQM+GQKLSIV
Sbjct: 87 LELIEKPDRSLALLDEYESEELGTSLCANHRSGYVAVLGKPNVGKSTLINQMVGQKLSIV 146
Query: 140 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 199
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LDSMMMKNVRSA +ADC++V+
Sbjct: 147 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDSMMMKNVRSAIGSADCVLVVA 206
Query: 200 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 259
DACK PE+IDE+LEEGVG+ LP+LLVLNKKDLIKPGEIAKKLEWY+KFT+VD+VIP+
Sbjct: 207 DACKTPEKIDEMLEEGVGNKDIGLPVLLVLNKKDLIKPGEIAKKLEWYQKFTNVDDVIPI 266
Query: 260 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 319
SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PY+C
Sbjct: 267 SAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFVQYRQEIPYSC 326
Query: 320 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVY 379
QVNVVSYK+RP AKDFIQVEI+VEK SQ+ I++GK GK++K+LATA+RLDIEDFLQKKVY
Sbjct: 327 QVNVVSYKSRPAAKDFIQVEILVEKESQRGIILGKDGKSIKMLATASRLDIEDFLQKKVY 386
Query: 380 LEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
LE+EVKVKENWRQDE LLK YGYGG+IQAL
Sbjct: 387 LEVEVKVKENWRQDERLLKRYGYGGEIQAL 416
>gi|357132500|ref|XP_003567868.1| PREDICTED: GTPase Era-like [Brachypodium distachyon]
Length = 404
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/330 (74%), Positives = 296/330 (89%), Gaps = 4/330 (1%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIV 139
L L EKPDR++A D+YE EE + NH+S VLGKPNVGKSTL NQ++GQKLSIV
Sbjct: 75 LELIEKPDRSLALLDEYESEELGTSQCANHRSGYVAVLGKPNVGKSTLINQIVGQKLSIV 134
Query: 140 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 199
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LDSMMMKNVRSA NADC++V+V
Sbjct: 135 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDSMMMKNVRSAIGNADCVLVVV 194
Query: 200 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 259
DACK PE+ID++LEEGVG+ +PI+L+LNKKD+I+PGEIAK+LEWY+KFT+VD+VIP+
Sbjct: 195 DACKVPEKIDDMLEEGVGNKDTPVPIVLILNKKDMIRPGEIAKRLEWYQKFTNVDDVIPI 254
Query: 260 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 319
SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PYAC
Sbjct: 255 SAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYRQEIPYAC 314
Query: 320 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVY 379
QVNV+ YK+RP+AKDFIQVEI+VE+ SQ+ I++GK GKA+K LATA+RLDIEDFLQKKVY
Sbjct: 315 QVNVIGYKSRPSAKDFIQVEILVERESQRSIILGKDGKAIKTLATASRLDIEDFLQKKVY 374
Query: 380 LEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
LEI+VKVKENWRQDE LLK YGYGG+IQAL
Sbjct: 375 LEIDVKVKENWRQDERLLKRYGYGGEIQAL 404
>gi|242091397|ref|XP_002441531.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor]
gi|241946816|gb|EES19961.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor]
Length = 459
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/371 (68%), Positives = 298/371 (80%), Gaps = 45/371 (12%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIV 139
L L EKPDR++A D+YE EE + NH+S VLGKPNVGKSTL NQM+GQKLSIV
Sbjct: 89 LELIEKPDRSLALLDEYESEELGTSLCANHRSGYVAVLGKPNVGKSTLINQMVGQKLSIV 148
Query: 140 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 199
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LDSMMMKNVRSA +ADC++V+
Sbjct: 149 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDSMMMKNVRSAIGSADCVLVVA 208
Query: 200 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 259
DACKAPE+IDE+LEEGVG+ LP+LLVLNKKDLIKPGEIAKKLEWY+KFT+VD+VIP+
Sbjct: 209 DACKAPEKIDEMLEEGVGNKDIALPVLLVLNKKDLIKPGEIAKKLEWYQKFTNVDDVIPI 268
Query: 260 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 319
SAK+G+GV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PY+C
Sbjct: 269 SAKFGNGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFVQYRQEIPYSC 328
Query: 320 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVY 379
QVNVVSYK+RPTAKDFIQVEI+VEK +Q+ I++GK GKA+K+LATA+RLDIEDFLQKKVY
Sbjct: 329 QVNVVSYKSRPTAKDFIQVEILVEKETQRSIILGKDGKAIKMLATASRLDIEDFLQKKVY 388
Query: 380 LE-----------------------------------------IEVKVKENWRQDEGLLK 398
LE IEVKVKENWRQDE LLK
Sbjct: 389 LEVYIHLIHLYYMVAVDWPSPAGMQPSWRSFYLTVMHDSFLVQIEVKVKENWRQDERLLK 448
Query: 399 HYGYGGQIQAL 409
YGYGG+IQAL
Sbjct: 449 RYGYGGEIQAL 459
>gi|294463173|gb|ADE77123.1| unknown [Picea sitchensis]
Length = 433
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/333 (67%), Positives = 274/333 (82%), Gaps = 9/333 (2%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDY-----ASHPNHKS----VLGKPNVGKSTLANQMIGQ 134
+SL++KP+R + ++ DY + P+H+S V+GKPNVGKSTL NQMIGQ
Sbjct: 99 VSLNDKPERMLNVKEEGADNGGDYDYGDLSVGPDHRSGYVAVVGKPNVGKSTLLNQMIGQ 158
Query: 135 KLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADC 194
KLSIVT+KPQTTRHRILG+CS P+YQM+LYDTPG+I+K++H LD+MMMKNV SA NADC
Sbjct: 159 KLSIVTDKPQTTRHRILGLCSAPDYQMVLYDTPGVIQKEMHKLDAMMMKNVHSATGNADC 218
Query: 195 IVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD 254
++ +VD CK PE+++++ EE D K K P LLVLNKKDL+KPGEIAK++EWYEKF D
Sbjct: 219 VLTVVDVCKVPEKVNDLFEEDGVDLKKKPPTLLVLNKKDLMKPGEIAKRMEWYEKFGGAD 278
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 314
++ +SAKYGHGVED+++WI++KLP GPAYY KDI+SEHPERFFV EI+REKIFMQYR E
Sbjct: 279 HILSISAKYGHGVEDVKNWIVSKLPYGPAYYSKDIISEHPERFFVAEIVREKIFMQYRQE 338
Query: 315 VPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFL 374
VPYACQVNV SY RPT+K FI++EIVVEK +QKIILIGK GKALKLLATAARLDIEDFL
Sbjct: 339 VPYACQVNVASYIARPTSKHFIEIEIVVEKGAQKIILIGKEGKALKLLATAARLDIEDFL 398
Query: 375 QKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQ 407
QK+VYLEI+VKVK NWRQD LLK +GY G I+
Sbjct: 399 QKQVYLEIKVKVKPNWRQDVDLLKRFGYSGAIR 431
>gi|168064687|ref|XP_001784291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664167|gb|EDQ50897.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/301 (66%), Positives = 245/301 (81%), Gaps = 7/301 (2%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
+ + +++GKPN GKSTL NQ+IGQKLSIVTNKPQTTRHRILGICSGP+YQM+LYDTPG+
Sbjct: 1 YAGYVALVGKPNAGKSTLLNQIIGQKLSIVTNKPQTTRHRILGICSGPDYQMVLYDTPGV 60
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEG----VGDHKDKLPI 225
I K++ LD MMM+NVR+A +NADC++++VDAC+ PE + L +G V D++ P
Sbjct: 61 ISKQVKKLDEMMMRNVRTATLNADCVLIVVDACEQPEEVMSRLTDGQQTLVTDNR---PT 117
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LLVLNKKDLIKPGEIAKK WYE EVI VSAK G GV+ I++W+L +LP GPAYY
Sbjct: 118 LLVLNKKDLIKPGEIAKKKAWYELNGGTTEVIAVSAKQGAGVDKIKEWLLGRLPYGPAYY 177
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
PKD+VSEHPERFFV EI+REKIF+QYR E+PY CQVNV SY R AKDFIQ+EIVVEK
Sbjct: 178 PKDVVSEHPERFFVSEILREKIFLQYRQEIPYVCQVNVTSYMERRVAKDFIQLEIVVEKE 237
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
QK IL+GKGG++LK+LATAARLDIEDF+ K+VY+EI+VKVKE+WR +E LL YGY G+
Sbjct: 238 GQKGILLGKGGESLKMLATAARLDIEDFVGKEVYVEIKVKVKEDWRGNEELLDQYGYSGK 297
Query: 406 I 406
I
Sbjct: 298 I 298
>gi|302754754|ref|XP_002960801.1| hypothetical protein SELMODRAFT_75698 [Selaginella moellendorffii]
gi|300171740|gb|EFJ38340.1| hypothetical protein SELMODRAFT_75698 [Selaginella moellendorffii]
Length = 330
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/295 (66%), Positives = 240/295 (81%), Gaps = 1/295 (0%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N +IGQKLSIVT KPQTTRHRILGICSGP YQMILYDTPG+I K++
Sbjct: 33 ALIGKPNVGKSTLLNGIIGQKLSIVTAKPQTTRHRILGICSGPNYQMILYDTPGVITKQM 92
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H LD +MMK+VRSA IN+DC++++ D C PE++ L+EG + P LLVLNKKD
Sbjct: 93 HKLDELMMKSVRSATINSDCLLLIADICHPPEQVLGTLDEGAVNLIKSKPTLLVLNKKDK 152
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K EI KK EWYEK + +DEVIPVSAK+G G+E+++ W+++KLPLGPAYYP+DIVSEH
Sbjct: 153 VKQSEIQKKQEWYEKNSGMDEVIPVSAKFGLGIEEVKQWLVSKLPLGPAYYPRDIVSEHQ 212
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-AKDFIQVEIVVEKNSQKIILIG 353
ERFFV EI REKIF YR E+PY QVNVV Y R AKDFI++EI+VEK SQK IL+G
Sbjct: 213 ERFFVSEIFREKIFQLYREEIPYCSQVNVVRYVEREAPAKDFIEIEILVEKESQKAILLG 272
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQA 408
K GKALK LATAARLDIEDF+ +K YLEI+VKVKE+WR++E LL+H+GY G+I +
Sbjct: 273 KEGKALKTLATAARLDIEDFVDRKCYLEIKVKVKEDWRKNEELLEHFGYSGKIAS 327
>gi|302804232|ref|XP_002983868.1| hypothetical protein SELMODRAFT_119375 [Selaginella moellendorffii]
gi|300148220|gb|EFJ14880.1| hypothetical protein SELMODRAFT_119375 [Selaginella moellendorffii]
Length = 330
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/295 (66%), Positives = 240/295 (81%), Gaps = 1/295 (0%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N +IGQKLSIVT KPQTTRHRILGICSGP YQMILYDTPG+I K++
Sbjct: 33 ALIGKPNVGKSTLLNGIIGQKLSIVTAKPQTTRHRILGICSGPNYQMILYDTPGVITKQM 92
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H LD +MMK+VRSA IN+DC++++ D C PE++ L+EG + P LLVLNKKD
Sbjct: 93 HKLDELMMKSVRSATINSDCLLLIADICHPPEQVLGTLDEGAVNLIKSKPTLLVLNKKDK 152
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K EI KK EWYEK + +DEVIPVSAK+G G+E+++ W+++KLPLGPAYYP+DIVSEH
Sbjct: 153 VKQSEIQKKQEWYEKNSGMDEVIPVSAKFGLGIEEVKQWLVSKLPLGPAYYPRDIVSEHQ 212
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-AKDFIQVEIVVEKNSQKIILIG 353
ERFFV EI REKIF YR E+PY QVNVV Y R AKDFI++EI+VEK SQK IL+G
Sbjct: 213 ERFFVSEIFREKIFQLYREEIPYCSQVNVVRYVEREAPAKDFIEIEILVEKESQKAILLG 272
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQA 408
K GKALK LATAARLDIEDF+ +K YLEI+VKVKE+WR++E LL+H+GY G+I +
Sbjct: 273 KEGKALKTLATAARLDIEDFVDRKCYLEIKVKVKEDWRKNEELLEHFGYSGKIAS 327
>gi|51854284|gb|AAU10665.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|215767306|dbj|BAG99534.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/236 (79%), Positives = 220/236 (93%)
Query: 174 IHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+H LD+MMMKNVRSA +ADC++V+VDACK PE+IDEILEEGVG+ +LP+LLVLNKKD
Sbjct: 1 MHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGVGNKDTELPVLLVLNKKD 60
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
LIKPGEIAKKLEWY+KFT+ D+VIP+SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEH
Sbjct: 61 LIKPGEIAKKLEWYQKFTNADDVIPISAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEH 120
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFVGEI+REKIF+QYR E+PYACQVNV+SYK+RPTAKDFIQVEI+VEK SQ+ I++G
Sbjct: 121 PERFFVGEIVREKIFLQYRQEIPYACQVNVISYKSRPTAKDFIQVEILVEKESQRSIILG 180
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
K GKA+K+LATA+RLDIEDFLQKKVYLEI VKVKENWRQDE LLK YGYGG+IQAL
Sbjct: 181 KDGKAIKMLATASRLDIEDFLQKKVYLEIMVKVKENWRQDELLLKRYGYGGEIQAL 236
>gi|219363705|ref|NP_001136454.1| uncharacterized protein LOC100216562 [Zea mays]
gi|194695756|gb|ACF81962.1| unknown [Zea mays]
gi|195627606|gb|ACG35633.1| GTP-binding protein era [Zea mays]
gi|413948514|gb|AFW81163.1| GTP-binding protein era [Zea mays]
Length = 236
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/236 (78%), Positives = 219/236 (92%)
Query: 174 IHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+H LDSMMMKNVRSA +ADC++V+ DACK PE+IDE+LEEGVG+ LP+LLVLNKKD
Sbjct: 1 MHKLDSMMMKNVRSAIGSADCVLVVADACKTPEKIDEMLEEGVGNKDIGLPVLLVLNKKD 60
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
LIKPGEIAKKLEWY+KFT+VD+VIP+SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEH
Sbjct: 61 LIKPGEIAKKLEWYQKFTNVDDVIPISAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEH 120
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFVGEI+REKIF+QYR E+PY+CQVNVVSYK+RP AKDFIQVEI+VEK SQ+ I++G
Sbjct: 121 PERFFVGEIVREKIFVQYRQEIPYSCQVNVVSYKSRPAAKDFIQVEILVEKESQRGIILG 180
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
K GK++K+LATA+RLDIEDFLQKKVYLE+EVKVKENWRQDE LLK YGYGG+IQAL
Sbjct: 181 KDGKSIKMLATASRLDIEDFLQKKVYLEVEVKVKENWRQDERLLKRYGYGGEIQAL 236
>gi|326504644|dbj|BAK06613.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 303
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 208/237 (87%), Gaps = 4/237 (1%)
Query: 80 ASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQK 135
A L L EKPDR++A D+YE EE A NH+S VLGKPNVGKSTL NQ++GQK
Sbjct: 67 ARPRLELIEKPDRSLALLDEYESEELGAALCANHRSGYVAVLGKPNVGKSTLINQIVGQK 126
Query: 136 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 195
LSIVT+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LDSMMMKNV+SA NADC+
Sbjct: 127 LSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDSMMMKNVQSAIGNADCV 186
Query: 196 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE 255
+V+ DA K PE+ID++LEEGVG+ + K+P++LVLNKKD+IKPGEIAKKLEWY+KFTDVD+
Sbjct: 187 IVVADASKVPEKIDDMLEEGVGNKETKVPVVLVLNKKDMIKPGEIAKKLEWYQKFTDVDD 246
Query: 256 VIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYR 312
VIP+SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR
Sbjct: 247 VIPISAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYR 303
>gi|294460854|gb|ADE76000.1| unknown [Picea sitchensis]
Length = 324
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 139/225 (61%), Positives = 179/225 (79%), Gaps = 9/225 (4%)
Query: 84 LSLSEKPDR--NMASPDDYEIEEFDYAS---HPNHKS----VLGKPNVGKSTLANQMIGQ 134
+SL++KP+R N+ ++DY P+H+S V+GKPNVGKSTL NQMIGQ
Sbjct: 99 VSLNDKPERMLNVKEEGADNGGDYDYGDLSVGPDHRSGYVAVVGKPNVGKSTLLNQMIGQ 158
Query: 135 KLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADC 194
KLSIVT+KPQTTRHRILG+CS P+YQM+LYDTPG+I+K++H LD+MMMKNV SA NADC
Sbjct: 159 KLSIVTDKPQTTRHRILGLCSAPDYQMVLYDTPGVIQKEMHKLDAMMMKNVHSATGNADC 218
Query: 195 IVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD 254
++ +VD C+ PE+++++ EE D K K P LLVLNKKDL+KPGEIAK++EWYEKF D
Sbjct: 219 VLTVVDVCRVPEKVNDLFEEDGVDLKKKPPTLLVLNKKDLMKPGEIAKRMEWYEKFGGAD 278
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFV 299
++ +SAKYGHGVED+++WI++KLP GPAYY KDI+SEHPERFF
Sbjct: 279 HILSISAKYGHGVEDVKNWIVSKLPYGPAYYSKDIISEHPERFFC 323
>gi|255087368|ref|XP_002505607.1| predicted protein [Micromonas sp. RCC299]
gi|226520877|gb|ACO66865.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/289 (52%), Positives = 206/289 (71%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PN GKSTL NQ++G KLSIVT KPQTTRHRILGI S YQM+L DTPG+++++
Sbjct: 7 AIVGRPNAGKSTLLNQLVGTKLSIVTFKPQTTRHRILGIVSEDHYQMVLLDTPGVMKEEF 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK-DKLPILLVLNKKD 233
+ LD MM+K+VR+A NAD ++ +VDA + P E L + +H+ + P+ +++NK D
Sbjct: 67 NKLDEMMLKSVRNAMANADVLLAIVDATRDPYGAFEGL---LPEHRANPAPLGVIINKCD 123
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
L++ EI + E++E V+ V PVSA G G + +R+W LT LP GP YPKD +SEH
Sbjct: 124 LLQVDEIREVKEYFEGIPGVERVFPVSALAGVGHDAVREWALTHLPEGPTLYPKDTISEH 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILI 352
PERFF+ EIIREKIF+QY+ EVPY+ QV V S+K R KD I +I E+ SQ ILI
Sbjct: 184 PERFFIAEIIREKIFLQYQQEVPYSTQVWVESHKERDGVKKDLILAKIFCERKSQMGILI 243
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
GK G+ALK L+TAARLDIE FL + V+L++ VKV+E WR DEG L+ G
Sbjct: 244 GKEGRALKELSTAARLDIEKFLGRPVFLDLGVKVREGWRSDEGSLEDLG 292
>gi|268315826|ref|YP_003289545.1| GTP-binding protein Era [Rhodothermus marinus DSM 4252]
gi|262333360|gb|ACY47157.1| GTP-binding protein Era [Rhodothermus marinus DSM 4252]
Length = 311
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/298 (51%), Positives = 205/298 (68%), Gaps = 13/298 (4%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P H+S ++GKPNVGKSTL N ++G KLSIVT KPQTTRHR+LGI SG YQ++ DT
Sbjct: 21 PEHRSGYVAIVGKPNVGKSTLMNALLGHKLSIVTPKPQTTRHRVLGILSGDTYQIVFLDT 80
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC-KAPERIDEILEEGVGDHKDKLPI 225
PG+++K + L M++ V A +AD ++ + +A KAP+ I +G H P
Sbjct: 81 PGVLKKARYKLHEHMLRTVDRAVADADLVLFMAEATQKAPDTI------SLG-HLGNRPA 133
Query: 226 LLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
+L LNK DL++ E + ++ Y K + V+P+SA G+ ++ + I+ +LP GP +
Sbjct: 134 ILALNKMDLVRNQEQVLPLVDAYMKQYPFEAVVPISALTGYNLDVLLKEIIHRLPPGPPF 193
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 344
YPKD +SEHPERFFV EIIREKIF Q+R E+PYA QVN+V YK RP KDFI EI+VE+
Sbjct: 194 YPKDQLSEHPERFFVAEIIREKIFEQFREEIPYAAQVNIVDYKERPEGKDFIDAEIIVER 253
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+QK ILIGKGG+ALK L TAAR +IE FL + VYL++ VKV+E+WR + LL+ YGY
Sbjct: 254 PTQKAILIGKGGQALKRLGTAARQEIEAFLGRPVYLQLHVKVREDWRNRDRLLRSYGY 311
>gi|345302117|ref|YP_004824019.1| GTP-binding protein Era-like-protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345111350|gb|AEN72182.1| GTP-binding protein Era-like-protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 311
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 151/298 (50%), Positives = 205/298 (68%), Gaps = 13/298 (4%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P H+S ++GKPNVGKSTL N ++G KLSIVT KPQTTRHR+LGI SG YQ++ DT
Sbjct: 21 PEHRSGYVAIVGKPNVGKSTLMNALLGHKLSIVTPKPQTTRHRVLGILSGDTYQIVFLDT 80
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC-KAPERIDEILEEGVGDHKDKLPI 225
PG+++K + L M++ V A +AD ++ + +A KAP+ I +G H P
Sbjct: 81 PGVLKKARYKLHEHMLRTVDRAVADADLVLFMAEATQKAPDTI------SLG-HLGNRPA 133
Query: 226 LLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
+L LNK DL++ E + ++ Y K + V+P+SA G+ ++ + ++ +LP GP +
Sbjct: 134 ILALNKMDLVRNQEQVLPLVDAYMKQYPFEAVVPISALTGYNLDVLLKELIHRLPPGPPF 193
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 344
YPKD +SEHPERFFV EIIREKIF Q+R E+PYA QVN+V YK RP KDFI EI+VE+
Sbjct: 194 YPKDQLSEHPERFFVAEIIREKIFEQFREEIPYAAQVNIVDYKERPEGKDFIDAEIIVER 253
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+QK ILIGKGG+ALK L TAAR +IE FL + VYL++ VKV+E+WR + LL+ YGY
Sbjct: 254 PTQKAILIGKGGQALKRLGTAARQEIEAFLGRPVYLQLHVKVREDWRNRDRLLRSYGY 311
>gi|384251856|gb|EIE25333.1| GTP-binding protein Era [Coccomyxa subellipsoidea C-169]
Length = 299
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/298 (49%), Positives = 198/298 (66%), Gaps = 7/298 (2%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++GKPN GKSTL N ++GQKLSIVT K QTTRHRI+G+ S +Q+I DTPG+
Sbjct: 4 HAGFVAIIGKPNAGKSTLLNGILGQKLSIVTPKAQTTRHRIIGLHSEESFQIIFLDTPGV 63
Query: 170 -----IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 224
I + ++MLD MM+NVR A +AD ++ +VD E +L K +P
Sbjct: 64 LREPSIAEPLNMLDQRMMQNVRQATKDADAVLAIVDGNDRAEEALPLLAPYC--RKGSVP 121
Query: 225 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
+ +VLNK DL+ + + +E++E +D VIPVSA G ++D+ +W ++ LP GPA
Sbjct: 122 LAVVLNKVDLLTALRLRQLVEYFELQPGIDAVIPVSALKGRNLKDVEEWAVSHLPEGPAL 181
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 344
YPKD VS+HPERFFVGEI+REKIF YR E+PY V V+ YK R KD +QV + VE
Sbjct: 182 YPKDAVSDHPERFFVGEIVREKIFQLYREEIPYCSTVQVLDYKERAVGKDLVQVAVYVEH 241
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
SQK I++G+GG ALK +ATAAR DIE F+ + VYL+I VKVKE WR++E L + GY
Sbjct: 242 ESQKGIMVGRGGSALKAMATAARADIEAFVGRPVYLDITVKVKEKWRKNEEALTNLGY 299
>gi|308811126|ref|XP_003082871.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116054749|emb|CAL56826.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 413
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/301 (48%), Positives = 209/301 (69%), Gaps = 11/301 (3%)
Query: 108 ASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 163
A P HKS ++G+PN GKSTL N ++G KLSIVT KPQTTRHRILGI S YQM+L
Sbjct: 105 ADPPGHKSGYVAIVGRPNAGKSTLMNDLVGTKLSIVTFKPQTTRHRILGIVSEDAYQMVL 164
Query: 164 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK- 222
DTPG++ ++ + LD +M+K+VR++ NAD + +VDA + P EG+ K K
Sbjct: 165 LDTPGVMVEEFNKLDGIMLKSVRNSMANADVMFYIVDAARDPYGA----WEGLAPKKGKR 220
Query: 223 LPILLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
+P L+LNK DL+ E I + ++++ +D+V+P+SA GVE++++W L +LPLG
Sbjct: 221 VPTALILNKCDLVGDRERIMELIDYFRAQDGIDDVLPISALNSTGVENVKNWALDRLPLG 280
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA-KDFIQVEI 340
P YPK+ +SEHPERFF+ EIIREKIF+QY+ EVPY+ QV + ++K R A KD I ++
Sbjct: 281 PTLYPKEAISEHPERFFIAEIIREKIFLQYKQEVPYSTQVWIEAHKERDGAKKDLILAKV 340
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
VE+ SQ I++G+GG A+K L++ AR DIE FL + V+L+I+VKV++ WRQDE L+
Sbjct: 341 YVERQSQIGIIVGQGGAAMKKLSSTAREDIEKFLGRPVFLDIQVKVRDGWRQDEASLEDL 400
Query: 401 G 401
G
Sbjct: 401 G 401
>gi|83815627|ref|YP_446187.1| GTP-binding protein Era [Salinibacter ruber DSM 13855]
gi|294508113|ref|YP_003572171.1| GTP-binding protein [Salinibacter ruber M8]
gi|83757021|gb|ABC45134.1| GTP-binding protein Era [Salinibacter ruber DSM 13855]
gi|294344441|emb|CBH25219.1| GTP-binding protein [Salinibacter ruber M8]
Length = 304
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/289 (51%), Positives = 194/289 (67%), Gaps = 8/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N ++G+KLSIVT KPQTTRHR+LGI SGPE+Q I DTPGIIE +
Sbjct: 21 AIVGKPNVGKSTLMNALLGEKLSIVTKKPQTTRHRVLGIHSGPEHQAIFLDTPGIIEPR- 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+ A +AD ++ L +A + + D + +GD P LVL K DL
Sbjct: 80 YALHETMMGQVQGAIRDADLLLFLHEATQ--DEPDTQSLKKIGD----TPAFLVLTKMDL 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I E +E YE DEV+P SAK G ++ + +L LP GP +YPKD +SEHP
Sbjct: 134 IPKEETLPLVESYEDRRAFDEVVPTSAKEGFNLQTLLHLVLDTLPEGPPFYPKDRISEHP 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA-KDFIQVEIVVEKNSQKIILIG 353
ERFFV E+IREK++ Y E+PY+ QVNVV+Y+ RP KD+I EIVV + S K ILIG
Sbjct: 194 ERFFVAEMIREKVYKHYHQEIPYSVQVNVVAYEERPEGTKDYIDAEIVVMEESHKGILIG 253
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+GGKALK + T AR DIE F+Q VYL + VKV+ENWR + +L+ YGY
Sbjct: 254 EGGKALKKVGTTAREDIEAFVQSPVYLNLHVKVQENWRDRKTVLRSYGY 302
>gi|145356544|ref|XP_001422488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582731|gb|ABP00805.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 351
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/298 (47%), Positives = 206/298 (69%), Gaps = 11/298 (3%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS ++G+PN GKSTL N ++G KLSIVT KPQTTRHRILGI S QM+L DT
Sbjct: 46 PGHKSGYAAIVGRPNAGKSTLMNDLVGTKLSIVTYKPQTTRHRILGILSDENSQMVLLDT 105
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK-LPI 225
PG++ ++ + LD MM+K+VR++ NAD + +VDA + P EG+ K K +P
Sbjct: 106 PGVMVEEFNKLDGMMLKSVRNSMANADVLFYIVDAARDPYGA----WEGLAPKKGKRVPT 161
Query: 226 LLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
L+LNK D++ E I + +E+++ +DEV+P+SA G ++++W L +LPLGP
Sbjct: 162 ALILNKCDMVGDRERIMELIEYFQAQEAIDEVLPISALNSTGTRNVKEWALERLPLGPTL 221
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVE 343
YPKD +SEHPERFF+ EIIREKIF+QY+ EVPY+ QV + ++K R KD I ++ VE
Sbjct: 222 YPKDAISEHPERFFIAEIIREKIFLQYKQEVPYSTQVWIETHKERDGVKKDLILAKVFVE 281
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
+ SQ I++G+GG A+K L+++AR DIE FL + V+L+I+VKV++ WR+D+ L+ G
Sbjct: 282 RQSQIGIIVGQGGAAMKKLSSSARADIEKFLGRPVFLDIQVKVRDGWREDDRSLEDLG 339
>gi|307109793|gb|EFN58030.1| hypothetical protein CHLNCDRAFT_20741 [Chlorella variabilis]
Length = 306
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 195/289 (67%), Gaps = 3/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PN GKSTL N ++ QKLSIVT K QTTRHRILGI S P +Q + DTPGII K
Sbjct: 20 AIIGRPNAGKSTLMNALLQQKLSIVTPKAQTTRHRILGILSEPGFQAVFLDTPGIIVDKR 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L+ MM +V+ A +ADC++ +VDA P++ +++ G D P+ ++LNK DL
Sbjct: 80 NKLEDKMMASVQQAVRDADCLLAIVDASHEPQQALAMIQPG--DDWKGPPMAVLLNKTDL 137
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ E+ WY ++ D V+P+SA ++ + +W++ KLP GP+ YPKDIVSE P
Sbjct: 138 VPAEELEALEAWYRQYCKADAVLPISALESSNLDAVVEWLVGKLPEGPSLYPKDIVSEQP 197
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-AKDFIQVEIVVEKNSQKIILIG 353
ERFFV EIIR+ IF+QY+ EVPY+ V VV+YK R T KD I+ EIV+EK QK I+IG
Sbjct: 198 ERFFVSEIIRKHIFLQYQQEVPYSVAVEVVNYKERHTRGKDLIEAEIVLEKERQKGIIIG 257
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ G A+K L TA+R +IE FL + VYL + VKV+E WR+D L+ GY
Sbjct: 258 RAGSAVKQLGTASRAEIEAFLGRPVYLSLTVKVREGWRKDTQQLERLGY 306
>gi|303288864|ref|XP_003063720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454788|gb|EEH52093.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 292
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 200/290 (68%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PN GKST N ++G KLSIVT KPQTTRHRILG+ S ++QM+L DTPG++ ++
Sbjct: 7 AIVGRPNAGKSTFMNALVGTKLSIVTYKPQTTRHRILGLVSEDDFQMVLLDTPGVMREEF 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEIL--EEGVGDHKDKLPILLVLNKK 232
+ LD MM+K+VR+A NAD ++ +VDA + P E L E GD D P+ +++NK
Sbjct: 67 NKLDEMMLKSVRNAMANADVLLAIVDARRDPLGNFEGLLPERRPGD--DPAPLGIIINKC 124
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DL+ EI +K +E + V+ V PVSA G G + ++ W ++KLP+GP YPKD +SE
Sbjct: 125 DLLGVDEIRRKT--FESYPGVERVFPVSALAGVGHDAVQRWAVSKLPVGPTLYPKDAISE 182
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNSQKIIL 351
HPERFF+ EIIREKIF+QY EVPY+ QV V S+K R KD + ++ VE+ SQ I+
Sbjct: 183 HPERFFIAEIIREKIFLQYAKEVPYSAQVWVSSHKERDGIKKDLVIAKVYVERKSQMGII 242
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
IG G ALK L+TAAR+DIE FL + VYL++ VKV+E WR D L++ G
Sbjct: 243 IGHEGAALKKLSTAARVDIEKFLGRPVYLDLSVKVREGWRSDGDSLENLG 292
>gi|302841942|ref|XP_002952515.1| Era-like protein [Volvox carteri f. nagariensis]
gi|300262154|gb|EFJ46362.1| Era-like protein [Volvox carteri f. nagariensis]
Length = 453
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/297 (47%), Positives = 191/297 (64%), Gaps = 7/297 (2%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P H+S V+GKPN GKSTL N ++GQKLSIVT KPQTTRHRI+GI S YQMIL+DT
Sbjct: 153 PGHRSGYVAVIGKPNAGKSTLINALVGQKLSIVTYKPQTTRHRIMGIASDKHYQMILFDT 212
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PG+IE+K L+ MM V + +++ IV +VD+ P+ + + G+ + P+
Sbjct: 213 PGVIERKRTKLEERMMAAVVHSIKDSEAIVAVVDSADKPKEALAMFQP--GESWNGPPMA 270
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
++LNK DL+ EI + WY + ++V SA+ G+E +R+W +++LP GP Y
Sbjct: 271 VLLNKADLLTEDEIQELKTWYTENCRAEQVFVGSAERRDGLEALREWAVSRLPEGPTLYS 330
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA-KDFIQVEIVVEKN 345
K IVSE PERFFV E IRE++F+ + EVPY QV + + R KDFI EIVVEK
Sbjct: 331 KKIVSEQPERFFVAECIREQVFLHCQQEVPYCSQVLIKEFTERRGGLKDFISAEIVVEKE 390
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
SQK ILIG GG L+ + AR +IE FL++ VYLE+ V+V ++WR D+ L YGY
Sbjct: 391 SQKGILIGAGGAMLRRIGQEARREIETFLERGVYLELSVQVDKDWRDDKEALNKYGY 447
>gi|373458094|ref|ZP_09549861.1| GTP-binding protein Era-like-protein [Caldithrix abyssi DSM 13497]
gi|371719758|gb|EHO41529.1| GTP-binding protein Era-like-protein [Caldithrix abyssi DSM 13497]
Length = 299
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/288 (47%), Positives = 193/288 (67%), Gaps = 4/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PN GKSTL N ++ KLSI++ KPQTTR R+LGI + EYQ++ DTPGII+ K
Sbjct: 16 AIIGLPNAGKSTLLNALLNIKLSIISAKPQTTRRRVLGILNKAEYQVVFIDTPGIIKPK- 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM+ V +A +AD + ++VDA + ++ LE + K P LL+LNK DL
Sbjct: 75 YKLHTRMMEQVHTALQDADLLALIVDATEHKHPVEVDLE---AMNPKKKPALLLLNKVDL 131
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I ++ ++ Y +F +E+IP+SA GV+ + I+ +LP P +YP D++S+ P
Sbjct: 132 INKQDLLPLIDQYREFYPFEEIIPISALKRDGVDQVEQEIVKRLPQHPPFYPPDVLSDQP 191
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV EIIREKIF ++ EVPY+ +V V +K RP +KD+I I VE+ SQK I+IGK
Sbjct: 192 ERFFVAEIIREKIFERFFQEVPYSTEVVVEEFKERPGSKDYIYAIIYVERPSQKGIIIGK 251
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ALK + AAR +IE+FL +K+YLE+ VKV ENWR DE LK GY
Sbjct: 252 KGEALKKIGEAARREIEEFLGRKIYLELRVKVNENWRYDERKLKRLGY 299
>gi|385810840|ref|YP_005847236.1| GTP-binding protein Era [Ignavibacterium album JCM 16511]
gi|383802888|gb|AFH49968.1| GTP-binding protein Era [Ignavibacterium album JCM 16511]
Length = 301
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 193/293 (65%), Gaps = 7/293 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G PNVGKSTL N ++ QK+SIVT KPQTTR +ILGI + YQ+I DTPGI+ +
Sbjct: 9 SIIGLPNVGKSTLLNAILKQKISIVTPKPQTTRKKILGILTENNYQIIFLDTPGIV-RPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILE----EGVGDHKDKLPILLVLN 230
++L M++ + + +AD +V+L D RI E E + + + K K PI+L LN
Sbjct: 68 YLLHEKMLEEINESIKDADVLVLLFDVSNES-RIKESEENEIIKNLIEQKTK-PIILALN 125
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D I + + + YE F + V+P++A VE + I++ L G +YP DI+
Sbjct: 126 KVDSITQEQAQQLVNHYESFNNFKAVVPIAASSNFNVERLIQEIVSLLSEGEKFYPDDII 185
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
SE ERFFV EIIREKIF Y +E+PY+ +V +V +K R T KDFI EI+VE++SQK I
Sbjct: 186 SEASERFFVSEIIREKIFELYEDEIPYSTEVIIVEFKERTTGKDFISAEIIVERDSQKPI 245
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+IGK GKA+K L AR IE+FL+K+VYLE+ VKV+E WR +E +LK++GYG
Sbjct: 246 IIGKEGKAIKKLGEVARKTIEEFLRKEVYLELRVKVREKWRSNEKMLKYFGYG 298
>gi|412991355|emb|CCO16200.1| GTP-binding protein Era [Bathycoccus prasinos]
Length = 381
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 137/290 (47%), Positives = 193/290 (66%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PN GKSTL N+++G KLSIVT KPQTTRHRILG+ S E QM+L DTPG++
Sbjct: 79 AIVGRPNAGKSTLLNKILGTKLSIVTKKPQTTRHRILGVLSDEESQMVLLDTPGVMRSAF 138
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVG-DHKDKLPILLVLNKKD 233
+ LD M+K+VRS+ ADC+++++D A E ++ E + D K+P + +NK D
Sbjct: 139 NKLDETMLKSVRSSVKTADCLIIVIDG-DAKETAEKDFENLLDVDVIGKVPTAVCVNKCD 197
Query: 234 LIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
IK + K+L +++ + V EVIP+SA GV+++ W KLP+GP+Y+ K+ +SE
Sbjct: 198 RIKDVQRIKELMKYFRQVEGVSEVIPISALNDTGVKEVVQWAKGKLPVGPSYFSKEYLSE 257
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNSQKIIL 351
HPERFFV EIIREKIF Y EVPY V V K R P AKD I+ I VE+ SQ I+
Sbjct: 258 HPERFFVAEIIREKIFELYSQEVPYCSSVWVEELKERKPPAKDLIRATIYVERQSQVGIV 317
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
+G+ G A+K L+T AR DIE FL++ V+LE++VK K WR ++ L +G
Sbjct: 318 VGEDGAAMKKLSTEARKDIEVFLERGVFLEMKVKSKPGWRSNDKSLTEFG 367
>gi|124008575|ref|ZP_01693267.1| GTP-binding protein Era [Microscilla marina ATCC 23134]
gi|123985949|gb|EAY25806.1| GTP-binding protein Era [Microscilla marina ATCC 23134]
Length = 302
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 193/297 (64%), Gaps = 6/297 (2%)
Query: 106 DYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
D H S++GKPNVGKSTL NQ+IG+KLSI+T+K QTTRHRI+G+ +G ++Q++ D
Sbjct: 11 DDNHHAGFVSIIGKPNVGKSTLMNQVIGEKLSIITSKAQTTRHRIMGVINGDDFQIVYSD 70
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGII+ K + L MM+ V ++ +AD I+ + D + + D I + + + P+
Sbjct: 71 TPGIIKPK-YELHKSMMRFVNTSLDDADVILFVTDIFEKHDENDVIEKLKISE----APV 125
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
+L++NK DL K ++ +K+ ++++ E+IP+SA ++ + + IL LP P Y+
Sbjct: 126 ILLVNKIDLAKDNQVEEKITYWKELIQPSEIIPISALNNINIDKLFESILKALPKHPPYF 185
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
PKD ++ PERFF E+IREKIF Y+ E+PYAC+V + +K + + I+ EI+VE+
Sbjct: 186 PKDTFTDKPERFFAAEMIREKIFKNYKQEIPYACEVMITEFKEKEEIIN-IRAEILVERQ 244
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
SQK ILIGKGG+ALK + AR D+E+F K+V+L VKV +WRQ L H GY
Sbjct: 245 SQKGILIGKGGQALKKIGIEARKDLEEFFAKQVFLAQHVKVSPDWRQQRNKLDHLGY 301
>gi|332666380|ref|YP_004449168.1| GTP-binding protein Era [Haliscomenobacter hydrossis DSM 1100]
gi|332335194|gb|AEE52295.1| GTP-binding protein Era-like-protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 298
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 191/292 (65%), Gaps = 6/292 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+TNKPQTTRHRI+GI SG ++QM+L DTPG+++K
Sbjct: 8 NIIGHPNVGKSTLMNALVGERMSIITNKPQTTRHRIIGILSGEDFQMVLSDTPGVVDKPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + M V+S +AD ++++ D + D +L + + ++P+ +VLNK DL
Sbjct: 68 YKMHQAMNSFVQSTFEDADLMLLVTDVLETYPAEDHLLAQ--LRKQQEVPMFVVLNKIDL 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++A+ +++ + +IP+SA + + + + LP GP YYPKD +++ P
Sbjct: 126 VDEEKLAQLQQFWAEQLPQATLIPISALKKTNTDLLLNTLKENLPEGPEYYPKDQLTDRP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT----AKDFIQVEIVVEKNSQKII 350
ERFF+ EIIREKI + Y E+PYA QV + +K T A I I VE+++QK I
Sbjct: 186 ERFFMSEIIREKIMLLYHQEIPYATQVIIEDFKEDQTVGGKAIARISATIYVERDTQKSI 245
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LIGK G ++K L T AR D+E FL+KKV+LE+ VKVKENWR D+ LK +GY
Sbjct: 246 LIGKNGVSIKKLGTDARQDMEIFLEKKVFLELFVKVKENWRNDDYFLKQFGY 297
>gi|392969405|ref|ZP_10334820.1| GTP-binding protein Era [Fibrisoma limi BUZ 3]
gi|387841599|emb|CCH56878.1| GTP-binding protein Era [Fibrisoma limi BUZ 3]
Length = 310
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/300 (42%), Positives = 201/300 (67%), Gaps = 14/300 (4%)
Query: 111 PNHK----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSG----PEYQMI 162
P+HK S++GKPNVGKSTL NQ++G++LSI+T+K QTTRHRI+GI +G E+Q++
Sbjct: 15 PDHKAGFVSIVGKPNVGKSTLMNQLVGERLSIITSKAQTTRHRIMGILNGMHNGQEFQLV 74
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 222
DTPGII+ + + +SMM VR + +AD ++ + D + + ++++E + +
Sbjct: 75 YSDTPGIIKPQYKLHESMM-SFVRGSLEDADVVLFVTDIFEQHDE-NDVIERL---QRTE 129
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
PILL++NK DL ++++K+ ++++ E+IP+SA ++ + + I+++LP P
Sbjct: 130 TPILLLINKVDLATQEQVSEKIAYWQEHFKAQEIIPISALNAFNIDKLFEGIVSRLPQHP 189
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
Y+PKD +++ PERFF EIIREKIF+ Y+ EVPY+C+V + S+K + IQ EI+V
Sbjct: 190 PYFPKDELTDKPERFFASEIIREKIFLNYKKEVPYSCEVVITSFKDKDDII-VIQSEILV 248
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ +Q+ IL+G+GGK +K AR ++E F KKV+L+ VKV+ +WRQ E LK GY
Sbjct: 249 ERTTQRAILLGEGGKMIKKTGIMAREELERFFGKKVFLDTFVKVEPDWRQKERTLKRLGY 308
>gi|167753498|ref|ZP_02425625.1| hypothetical protein ALIPUT_01772 [Alistipes putredinis DSM 17216]
gi|167658123|gb|EDS02253.1| ribosome biogenesis GTPase Era [Alistipes putredinis DSM 17216]
Length = 293
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 185/288 (64%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILG+ SG ++Q++ DTPGI+ K
Sbjct: 8 NIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGVVSGEDFQIVFSDTPGIL-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MMK V A +AD I+ + D + +R ++ILE+ + +P L V+NK DL
Sbjct: 67 YKLQESMMKFVTGAVNDADVILYVTDTVEQSDRSNDILEK---IRQSDIPTLAVINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P ++ + ++ ++ ++PVSA+ ++ + D IL +LP G A+Y KD +++
Sbjct: 124 TTPEKLEELVDKWQALLPAATIVPVSARENFNIKGLFDLILERLPEGEAFYSKDTLTDKT 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFF EIIREKI Y E+PY C++ + +Y+ PT D I I V ++SQK ILIG
Sbjct: 184 LRFFASEIIREKILRNYDKEIPYCCEIAIEAYREEPTI-DRISAVIYVARDSQKGILIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + AR DIE FL KKV+LE+ VKV ENWR +E LK +GY
Sbjct: 243 KGEKLKKVGQQAREDIEQFLGKKVFLELYVKVNENWRDNERQLKRFGY 290
>gi|424841638|ref|ZP_18266263.1| GTP-binding protein Era [Saprospira grandis DSM 2844]
gi|395319836|gb|EJF52757.1| GTP-binding protein Era [Saprospira grandis DSM 2844]
Length = 299
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 188/294 (63%), Gaps = 8/294 (2%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G+++SI+TNKPQTTRHRILGI S ++Q++ DTPG
Sbjct: 8 HKSGFVNIVGHPNVGKSTLMNALVGERMSIITNKPQTTRHRILGIVSEEDFQIVFSDTPG 67
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
+I+ + + M + V+S ++D ++++ DA + I E K K P+ L+
Sbjct: 68 LIQDPSYKMQERMNEYVKSTLEDSDLMLLVADATEKISDESTIFELLA---KLKAPVFLL 124
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
LNK DL+ P E ++L + K D E+IP+SA + + + ++ ++P GP YYPK+
Sbjct: 125 LNKIDLLPPKEQLEQLAAWSKKLDFAELIPISALNRINTDLVLEKVIERMPEGPTYYPKE 184
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
++ PERFF+ EIIREKI + Y E+PY+ +V V +++ I I V + +QK
Sbjct: 185 QFTDRPERFFMSEIIREKILLNYHQEIPYSVEVVVEAFQEEENITR-ILANIYVARKTQK 243
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIGKGG+A+K L ARL I+ FL+ KVYLE+ VK+K+NWR DE L ++GY
Sbjct: 244 AILIGKGGQAIKRLGQDARLAIQAFLETKVYLELHVKIKDNWRDDERSLNYFGY 297
>gi|379730719|ref|YP_005322915.1| GTPase Era [Saprospira grandis str. Lewin]
gi|378576330|gb|AFC25331.1| GTPase Era [Saprospira grandis str. Lewin]
Length = 299
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 187/288 (64%), Gaps = 4/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+TNKPQTTRHRILGI S ++Q++ DTPG+I+
Sbjct: 14 NIVGHPNVGKSTLMNALVGERMSIITNKPQTTRHRILGIVSEEDFQIVFSDTPGLIQDPS 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + M + V+S ++D ++++ DA + I E K K P+ L+LNK DL
Sbjct: 74 YKMQERMNEYVKSTLEDSDLMLLVADATEKIADESAIFELLA---KLKAPVFLLLNKIDL 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E ++L + K D E+IP+SA + + + ++ ++P GP YYPK+ ++ P
Sbjct: 131 LPPKEQLEQLAAWSKKLDFAELIPISALNRINTDLVLEKVIERMPEGPTYYPKEQFTDRP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFF+ EIIREKI + Y E+PY+ +V V +++ I I V + +QK ILIGK
Sbjct: 191 ERFFMSEIIREKILLNYHQEIPYSVEVVVEAFQEEEDITR-ILANIYVARKTQKAILIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+A+K L ARL I++FL+ KVYLE+ VK+K+NWR DE L ++GY
Sbjct: 250 GGQAIKRLGRDARLAIQEFLETKVYLELHVKIKDNWRDDERSLNYFGY 297
>gi|441501603|ref|ZP_20983693.1| GTP-binding protein Era [Fulvivirga imtechensis AK7]
gi|441434626|gb|ELR68080.1| GTP-binding protein Era [Fulvivirga imtechensis AK7]
Length = 293
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 192/290 (66%), Gaps = 11/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPNVGKSTL NQ++G++LSI+T+K QTTRHRI+GI SG +Q+I DTPGII+ +
Sbjct: 12 SIIGKPNVGKSTLMNQLVGERLSIITSKAQTTRHRIMGIISGENFQIIYSDTPGIIKPEY 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ +S MMK V + +AD ++ + D I E +E + DH ++ PI+ +LNK
Sbjct: 72 ELHNS-MMKFVSHSLEDADVVLFITD-------IYEKFDESLSDHLRRIDAPIIFILNKV 123
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D K + K+ ++++ + + +SA G G+ ++ I+ +P PAY+PKD +++
Sbjct: 124 DQAKGTQAEDKITYWKEHVKAERYLAISALEGLGIAELFASIVDLMPEHPAYFPKDELTD 183
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PE+FFV EIIREKIF+ Y+ EVPY+ +V V +K T I+ EI VE+ SQK I+I
Sbjct: 184 KPEKFFVEEIIREKIFLNYKKEVPYSTEVVVTEFKEDETIIR-IRAEIYVERKSQKGIII 242
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG+ALK + AR D+E F K+++LE VKV ENWR+ + LK++GY
Sbjct: 243 GKGGEALKKVGIQARADLEQFFNKQIHLETFVKVAENWRRKDINLKNFGY 292
>gi|395216004|ref|ZP_10401132.1| GTPase Era [Pontibacter sp. BAB1700]
gi|394455598|gb|EJF10049.1| GTPase Era [Pontibacter sp. BAB1700]
Length = 295
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 200/293 (68%), Gaps = 14/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPNVGKSTL N ++G+KLSI+T+K QTTRHRI+GI +G ++Q++ DTPGII+ +
Sbjct: 12 SIVGKPNVGKSTLMNALVGEKLSIITSKAQTTRHRIMGILNGDDFQIVYSDTPGIIKPQ- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEI--LEEGVGDHKDKLPILLVLNKK 232
+ L MM VR++ +AD I+ + D + + D I L+ ++PILL++NK
Sbjct: 71 YALHESMMSFVRTSLEDADIILFVTDIYEKHDEDDVIKRLQHA------EVPILLLINKI 124
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D E+ +K+ ++++ + E+ P+SA + GVE + + ++ LP PA+YPKD +++
Sbjct: 125 DQATEEEVQEKVAYWQEKMNPTEIHPISALHNFGVEQLFNRLMALLPEHPAFYPKDELTD 184
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKII 350
PERFFV E+IREKIF+ Y+ E+PY+ +V V +K +D I++ EI VE+ SQK I
Sbjct: 185 KPERFFVSEMIREKIFLNYKKEIPYSTEVVVEEFK---EEEDIIRIRAEISVERKSQKGI 241
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+IG G+ALK + T ARLD+E F QKK++L++ V+V ENWR D+ LL+ +GY
Sbjct: 242 VIGHKGEALKKVGTQARLDMEQFFQKKIFLDLYVRVNENWRTDQKLLRRFGYS 294
>gi|343085043|ref|YP_004774338.1| GTP-binding protein Era [Cyclobacterium marinum DSM 745]
gi|342353577|gb|AEL26107.1| GTP-binding protein Era-like-protein [Cyclobacterium marinum DSM
745]
Length = 296
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 203/301 (67%), Gaps = 15/301 (4%)
Query: 109 SHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 164
S HK+ ++GKPNVGKSTL N ++G+KLSI+++K QTTRHRILGI + PEYQ++
Sbjct: 2 SENTHKAGFVNIIGKPNVGKSTLMNALLGEKLSIISSKAQTTRHRILGIMNEPEYQIVFS 61
Query: 165 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEE-GVGDHKDKL 223
DTPG+++ K + L MM V + +AD IV + D + E I++I+++ D +
Sbjct: 62 DTPGMLKPK-YELHKSMMGFVNLSLEDADVIVFVTDLFENDEEIEDIIKKINAAD----V 116
Query: 224 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 283
P+LL++NK DL K ++A+ +++ + + D VIP+SA G ++ I IL +LP+ P
Sbjct: 117 PVLLIINKIDLNKEEKLAEVTQYWTEKINADIVIPISALEGFNLQKILQEILDRLPVHPP 176
Query: 284 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IV 341
+Y K+ +S+ PERFF EI+REKIF+QY+ E+PY+ +V + ++ ++ I++ I
Sbjct: 177 FYDKEELSDRPERFFASEIVREKIFIQYKKEIPYSTEVRIEDFE---ETENLIRMRAVIF 233
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
VE++SQK I+IG GKALK + T AR+++E F KKV+LE VKV++NWR+++ L+ +G
Sbjct: 234 VERDSQKGIIIGDKGKALKRVGTQARIEMEKFFGKKVFLETFVKVEDNWRKNKNKLRKFG 293
Query: 402 Y 402
Y
Sbjct: 294 Y 294
>gi|371777228|ref|ZP_09483550.1| GTPase Era [Anaerophaga sp. HS1]
Length = 293
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/288 (44%), Positives = 196/288 (68%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL+NQ+IG++LSI+T+K QTTRHRI GI + +YQ+I DTPG+++ K
Sbjct: 9 NIVGNPNVGKSTLSNQLIGERLSIITSKAQTTRHRIFGIVNTEDYQIIFSDTPGVLKPKY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + +SA I+AD ++ + D + P++ DE L + K+PILL +NK DL
Sbjct: 69 KLQESMLQFS-KSALIDADILLYITDTIEQPDKNDEFLNLV---KRAKVPILLAINKIDL 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I ++ +++E+++K E+ P+SA + ++++ + IL LP P Y+ KD +++ P
Sbjct: 125 INQQKLEERVEYWQKELPHAEIFPISALHNFNLKNLYNRILDLLPESPPYFDKDALTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV EIIREKI + Y+ E+PY+ +V V YK P ++ I+ I V ++SQK I+IG
Sbjct: 185 ERFFVSEIIREKILLNYQKEIPYSVEVEVEEYKEGP-ERNHIRCVIHVTRDSQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK L AR +IE FL KKV+LE+ VKV ++WR LK++GY
Sbjct: 244 KGKALKKLGIDARKEIEMFLGKKVFLELYVKVSKDWRDRPNYLKNFGY 291
>gi|346226854|ref|ZP_08847996.1| GTPase Era [Anaerophaga thermohalophila DSM 12881]
Length = 293
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 193/288 (67%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL+N + G++LSI+T+K QTTRHRI GI + +YQ+I DTPG+++ K
Sbjct: 9 NIIGNPNVGKSTLSNHLTGERLSIITSKAQTTRHRIFGIVNTDDYQIIFSDTPGVLKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + M+ +SA +AD ++ + D ++P++ DE L+ K ++P+LLV+NK DL
Sbjct: 68 YKLQASMLHFSKSALSDADILLYITDTVESPDKNDEFLQLV---KKTEVPVLLVINKIDL 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I ++ + +++++ E+ P+SA + + ++ D I+ LP+ P Y+ KD +++ P
Sbjct: 125 IDQQKLEELVDYWKNELPGAEIFPISALHDFNIRNLYDRIVELLPVSPPYFDKDALTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFF+ EIIREKI + Y+ E+PY+ +V V YK T D I+ I V ++SQK I+IG
Sbjct: 185 ERFFISEIIREKILLNYQKEIPYSVEVEVDEYKEGATRND-IRCIIHVARDSQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK L AR +IE FL KKV+LE+ VKV ++WR + LK++GY
Sbjct: 244 QGKALKKLGIDARHEIETFLGKKVFLELYVKVSKDWRDKDNFLKNFGY 291
>gi|291515778|emb|CBK64988.1| GTP-binding protein Era [Alistipes shahii WAL 8301]
Length = 293
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 183/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+KLSI+T+K QTTRHRI+GI SG ++Q++ DTPGI+ K
Sbjct: 8 NIIGNPNVGKSTLMNALVGEKLSIITSKAQTTRHRIMGIVSGEDFQIVYSDTPGIL-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MMK V A +AD I+ + D + ER EI++ + +P ++V+NK DL
Sbjct: 67 YKLQESMMKFVTGALTDADVILYVTDTVEQSERSAEIVD---SIRRSGIPTVVVINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P + ++ ++ +V+P SAK +E + IL+ LP GPA+YPKD +++
Sbjct: 124 STPEALEALVDKWQAEIPGAQVVPTSAKENFNIEGLFRTILSLLPEGPAFYPKDTLTDKT 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFF EIIREKI Y E+PY C++ + SYK PT D I I V ++SQK ILIG
Sbjct: 184 LRFFASEIIREKILKFYDKEIPYCCEIEIESYKEEPTI-DRIAATIYVARDSQKGILIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + AR D+E FL KKV+L++ VKV ++WR +E L+ +GY
Sbjct: 243 KGEKLKRVGQTAREDMEQFLGKKVFLQLFVKVSDDWRNNERQLRRFGY 290
>gi|284040066|ref|YP_003389996.1| GTP-binding protein Era [Spirosoma linguale DSM 74]
gi|283819359|gb|ADB41197.1| GTP-binding protein Era [Spirosoma linguale DSM 74]
Length = 306
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 195/305 (63%), Gaps = 10/305 (3%)
Query: 102 IEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP---- 157
IE F S++GKPNVGKSTL NQ++G++LSI+T K QTTRHRI+GI +G
Sbjct: 6 IENFPADHKAGFVSIVGKPNVGKSTLMNQLVGERLSIITAKAQTTRHRIMGILNGTHDGT 65
Query: 158 EYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVG 217
E+Q++ DTPGII K ++ L MM VR + +AD ++ + D + + D ++E
Sbjct: 66 EFQLVYSDTPGII-KPLYKLHESMMSFVRGSIEDADVVLFVTDIFEQHDEND-VIERL-- 121
Query: 218 DHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 277
K ++P+LL++NK D ++ +K+ ++E+ E+IP+SA V+ + + I+++
Sbjct: 122 -QKSEVPVLLLINKVDQATQDQVVEKIAYWEERFKATEIIPISALNDFNVDRVFEGIISR 180
Query: 278 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 337
LP P Y+PKD +++ PERFF EIIREKIF+ Y+ EVPY+ +V V +K + IQ
Sbjct: 181 LPQHPPYFPKDELTDKPERFFASEIIREKIFLNYKKEVPYSSEVVVTGFKEKDDII-VIQ 239
Query: 338 VEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLL 397
EI+VE+ +Q+ IL+G+GGK +K AR ++E F KKV+LE VKV+ +WRQ E +L
Sbjct: 240 AEILVERATQRAILLGEGGKMIKKTGIMAREELERFFGKKVFLEQFVKVEPDWRQKERML 299
Query: 398 KHYGY 402
K GY
Sbjct: 300 KRLGY 304
>gi|260061761|ref|YP_003194841.1| GTP-binding protein Era [Robiginitalea biformata HTCC2501]
gi|88785893|gb|EAR17062.1| putative GTP-binding protein (cell growth-related) [Robiginitalea
biformata HTCC2501]
Length = 295
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 191/291 (65%), Gaps = 11/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q++ DTPGII K
Sbjct: 10 NIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDFQIVFSDTPGII-KPA 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM VR A ++AD ++ +V+ + + DE E + ++P+LL++NK D
Sbjct: 69 YGLQESMMDFVRLALVDADVLLYMVEVGEKGLK-DEAFAEKI--RSSQIPVLLLINKIDT 125
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
G++ +++ W E+F + E+IP+SA GV ++ D IL LP P Y+PKD +++
Sbjct: 126 SDQGQLEEQVAFWTEQFPNA-EIIPISALERFGVPEVLDRILALLPEAPPYFPKDQLTDR 184
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PERFFV EIIREKI + Y+ E+PYA ++ ++ + I++ I+VE+ +QK IL
Sbjct: 185 PERFFVNEIIREKILLHYKKEIPYAVEIETERFE---ETDEIIRIGAVIMVERATQKGIL 241
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IG G ALK + T AR D+E F KKV+LE+ VKV +NWR D L+ +GY
Sbjct: 242 IGHKGSALKRVGTEARKDLETFFDKKVFLELFVKVNKNWRNDARQLRRFGY 292
>gi|410028613|ref|ZP_11278449.1| GTPase Era [Marinilabilia sp. AK2]
Length = 296
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 192/289 (66%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + YQ++ DTPG+++ K
Sbjct: 12 NIIGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIINDDHYQIVFSDTPGMLKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V + +AD I+ + D + E I++++E+ ++ +P+LLV+NK DL
Sbjct: 71 YELHKNMMSFVHMSLEDADVILFVTDLFETDEEIEDVIEKI---NQSGVPVLLVINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
K ++ + +++ + + VIP+SA E I IL +LP+ P +Y KD +++ P
Sbjct: 128 SKENQLEEVTQYWTQRIKAETVIPISATESFNTERILQEILDRLPVHPPFYDKDELTDKP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVS-YKTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERFF EI+REKIF+ Y+ E+PY+ QV + Y+ + I+ I VE+NSQK I+IG
Sbjct: 188 ERFFASEIVREKIFLNYKKEIPYSTQVEIEDFYEEEKIIR--IRAVIYVERNSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+GGKALK + T AR ++E F KK++LE VKV E+WR+D+ L+ +GY
Sbjct: 246 EGGKALKRIGTQAREEMEKFFGKKIFLETYVKVAEDWRKDKNKLRRFGY 294
>gi|406662617|ref|ZP_11070708.1| Bex protein [Cecembia lonarensis LW9]
gi|405553385|gb|EKB48643.1| Bex protein [Cecembia lonarensis LW9]
Length = 296
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 191/288 (66%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + YQ++ DTPG+++ K
Sbjct: 12 NIIGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIINDDHYQIVFSDTPGMLKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V + +AD I+ + D + E I++++E+ ++ +P+LLV+NK DL
Sbjct: 71 YELHKNMMGFVHMSLEDADVILFVTDLFETDEEIEDVIEKI---NQSGVPVLLVINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
K ++ + +++ + + VIP+SA E I IL +LP+ P +Y KD +++ P
Sbjct: 128 SKENQLEEVTQYWTQRIKAETVIPISATESFNTERILQEILDRLPVHPPFYNKDELTDKP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFF EI+REKIF+ Y+ E+PY+ QV + + I+ I VE++SQK I+IG+
Sbjct: 188 ERFFASEIVREKIFLNYKKEIPYSTQVEIEDFYEEENIIR-IRAIIYVERSSQKGIIIGE 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGKALK + T ARL++E F KK++LE VKV E+WR+D+ L+ +GY
Sbjct: 247 GGKALKRIGTQARLEMEKFFGKKIFLETYVKVAEDWRKDKNKLRRFGY 294
>gi|194334593|ref|YP_002016453.1| GTP-binding protein Era [Prosthecochloris aestuarii DSM 271]
gi|194312411|gb|ACF46806.1| GTP-binding protein Era [Prosthecochloris aestuarii DSM 271]
Length = 307
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 185/297 (62%), Gaps = 7/297 (2%)
Query: 113 HKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEK 172
+ +++G PN GKSTL N+++ KLSIVT K QTTR +I GI + Q+I DTPGI+
Sbjct: 11 YAAIIGPPNAGKSTLLNRLLDHKLSIVTPKSQTTRKKITGIYHNEDCQIIFLDTPGIMID 70
Query: 173 KIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-EILEEGVGD--HKDKLPILLVL 229
+HML M+K R AD +V L+ A + D E ++ D ++K P++ VL
Sbjct: 71 PMHMLHEAMLKTTRETLREADVVVALIPAVRKETLFDREFTKQLFHDWLTREKKPVVAVL 130
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK DL+ E + L K ++ + +SA G V+D+ + + LP+ YP+DI
Sbjct: 131 NKCDLLSKAEQKEALAMIRKELKPEKAMALSALQGTHVDDLVEALQPFLPMDEPLYPEDI 190
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIVVEKN 345
+S PERFFV EIIREKIF+QY E+PYA +V + +K + PT KD I+ +VVE++
Sbjct: 191 LSTAPERFFVSEIIREKIFLQYGKEIPYATEVVIDEFKEQHEEDPTRKDLIRCSVVVERD 250
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+QK ILIGK G ALK L A+R +IE FL + V+LEI VKV+ NWR+ +G+LK YGY
Sbjct: 251 TQKHILIGKKGSALKKLGQASREEIEKFLDRPVFLEIFVKVRPNWRRKKGMLKSYGY 307
>gi|392397330|ref|YP_006433931.1| GTP-binding protein Era [Flexibacter litoralis DSM 6794]
gi|390528408|gb|AFM04138.1| GTP-binding protein Era [Flexibacter litoralis DSM 6794]
Length = 311
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 192/295 (65%), Gaps = 6/295 (2%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
NH++ ++GKPN GKSTL N ++G+KL+IVT+K QTTRHRI+GI + +YQ++ DTP
Sbjct: 18 NHQAGFVALVGKPNSGKSTLMNAVLGEKLAIVTHKAQTTRHRIMGILNNEDYQIVFSDTP 77
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
GII K + L MM+ V + +AD I+++ ++ + D I + K K+P+++
Sbjct: 78 GIISPK-YELHEKMMRFVEKSLEDADVILLVTSLDESHDEEDAIQKLKKVLDKKKIPLIV 136
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+LNK DL+ I +K+ +++ + EV+P+SA G V ++ IL LP PAYY K
Sbjct: 137 LLNKSDLVNQEIIDEKIARWKEVLNPQEVLPLSALEGFDVNEVLQLILKYLPKHPAYYDK 196
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
+++++ PERFF EIIREKIF+ Y E+PY+ +V ++ +K P I EI VE+ SQ
Sbjct: 197 EMLTDRPERFFAAEIIREKIFLNYEQEIPYSTEVGILEFKDTPKILR-IHAEIHVERKSQ 255
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIGK G ALK++ T ARLD+E F KKV+L++ V++ E+WR+ L +GY
Sbjct: 256 KGILIGKNGSALKIIGTEARLDMEAFFGKKVFLQLYVRISEDWRKKADKLNWFGY 310
>gi|404403851|ref|ZP_10995435.1| GTPase Era [Alistipes sp. JC136]
Length = 293
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G++LSI+T+K QTTRHRI+GI SG ++Q++ DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRIMGIVSGEDFQIVYSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
I+ K + L MMK V A +AD I+ + D + +R EI+E ++ +P ++V
Sbjct: 62 IL-KPSYKLQESMMKFVTGAVTDADVILYVTDTVERSDRSAEIVER---INQSGIPTIVV 117
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK DL P + ++ ++ ++PVSAK VE + IL LP GPA+YPKD
Sbjct: 118 INKIDLSTPEALDALVDKWQAEIPGARIVPVSAKENFNVEGVFKIILELLPEGPAFYPKD 177
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ RFF EIIREKI Y E+PY C++ + SYK P A D I I V ++SQK
Sbjct: 178 TLTDKTLRFFASEIIREKILKFYDKEIPYCCEIEIDSYKEEP-AIDRIAATIYVARDSQK 236
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIG G+ LK + AR D+E FL KKV+L++ VKV ++WR +E L+ +GY
Sbjct: 237 GILIGHKGEKLKRVGQTAREDMEQFLGKKVFLQLFVKVSDDWRNNERQLRRFGY 290
>gi|327403776|ref|YP_004344614.1| GTP-binding protein Era-like-protein [Fluviicola taffensis DSM
16823]
gi|327319284|gb|AEA43776.1| GTP-binding protein Era-like-protein [Fluviicola taffensis DSM
16823]
Length = 291
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 188/295 (63%), Gaps = 9/295 (3%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
+HKS ++G PNVGKSTL N ++G+KLSIVT+K QTTRHRI G+ +G ++Q++ DTP
Sbjct: 2 SHKSAFVNIVGSPNVGKSTLMNGLVGEKLSIVTSKAQTTRHRIHGLVNGDDHQIVFSDTP 61
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
G++ + L MM V S+ +AD ++ + D + E LE V K K+P+LL
Sbjct: 62 GVVNAS-YKLHEAMMSYVESSFKDADILLFITDMSENEMNHKETLERIV---KLKIPVLL 117
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+LNK DL ++ ++++++++ E+IP SA + + I D IL P GPAY+ K
Sbjct: 118 ILNKIDLADQTKLEERVQYWKEKVPNAEIIPTSALHKFNINVIWDRILQLAPEGPAYFDK 177
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +S+ P RFFV E+IREKIF+ EVPYACQV + SY+ I+ I+VE++SQ
Sbjct: 178 DELSDRPVRFFVAEMIREKIFLHCDKEVPYACQVEIESYQEAENIT-HIRALIIVERDSQ 236
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIGK G LK + +RLD+E FL +KV+LE VKV ++WR E LK YGY
Sbjct: 237 KGILIGKKGDMLKRIGRESRLDMEAFLGQKVFLETFVKVDKDWRTSEQKLKKYGY 291
>gi|397690753|ref|YP_006528007.1| GTP-binding protein Era [Melioribacter roseus P3M]
gi|395812245|gb|AFN74994.1| GTP-binding protein Era [Melioribacter roseus P3M]
Length = 303
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 186/290 (64%), Gaps = 3/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPNVGKSTL N +IG+KLSI NKPQTTR +I+GI S YQ+I DTPGI+ +
Sbjct: 9 SIIGKPNVGKSTLMNALIGEKLSITANKPQTTRKKIIGILSDENYQIIFQDTPGILNPE- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-KDK-LPILLVLNKK 232
+++ M + + A +AD ++ ++D P + +E V + KDK + +L++NK
Sbjct: 68 YLMQERMYEYITEAVKDADLLLFMIDISTDPTGQRTLSDERVYNLLKDKSIKKILLINKV 127
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DL+ E+ + EK +++IP+SA + ++ + D IL LP P Y+P D +S+
Sbjct: 128 DLVSQNEVEALIRQLEKNDLFEKIIPISATANYNLQTVIDTILEYLPEHPKYFPDDQLSD 187
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
ERFFV EIIREKIF Y+ E+PY+ +V + +K R AKD+I+ IVVEK +QK I+I
Sbjct: 188 ANERFFVSEIIREKIFEMYQEEIPYSTEVVIEEFKERENAKDYIRAVIVVEKETQKPIII 247
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+ +K L AR IE FL ++VYLE+ VKV+E WR + +LK +GY
Sbjct: 248 GAKGEMIKKLGRKAREAIEAFLGREVYLELFVKVREKWRSNPHMLKSFGY 297
>gi|418322682|ref|ZP_12933996.1| GTP-binding protein Era [Staphylococcus pettenkoferi VCU012]
gi|365231129|gb|EHM72188.1| GTP-binding protein Era [Staphylococcus pettenkoferi VCU012]
Length = 299
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 183/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKPQTTRNKIQGVMTQEDAQIIFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ R+ D I+ +V+ + R DE + E + H D P+ LVLNK DL
Sbjct: 69 HKLGDYMMRVARNTLAEIDAIMFMVNINEEIGRGDEYIMEML-KHVDT-PVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ K+E Y+ + D E++P+SA GH V+ + + + LP GP YYP D +S+HP
Sbjct: 127 VHPDDLMPKIEQYQTYMDFTEIVPISALEGHNVDHFIEVLKSYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V E+IREKI E+P++ VNV ++ I+ I VE+NSQK I+IGK
Sbjct: 187 EQFVVSELIREKILHLTSEEIPHSIGVNVDRMIKESESRVRIEATIFVERNSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + ARLDIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARLDIEHLLGSKVYLELWVKVQKDWRNKVNFIRQMGY 294
>gi|409197745|ref|ZP_11226408.1| GTPase Era [Marinilabilia salmonicolor JCM 21150]
Length = 293
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 193/288 (67%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL+N++IG++LSI+T+K QTTRHRI GI + +YQ++ DTPG+++ K
Sbjct: 9 NIIGNPNVGKSTLSNELIGERLSIITSKAQTTRHRIFGIVNKDDYQIVFSDTPGVLKPKY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + +SA +AD ++ + D + P++ +E LE K +P LLV+NK DL
Sbjct: 69 KLQESMLHFS-KSALSDADILLYITDTVETPDKNNEFLEMV---KKSDIPALLVINKIDL 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+ E+ +++++K E+ P+SA + ++++ D I+ LP P ++ KD +++ P
Sbjct: 125 IQQKELEDLVDFWKKEIPRAEIYPMSALHKFNIQNLYDRIVELLPESPPFFDKDALTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFF+ EIIREKI + Y+ E+PY+ ++ V +K D I+ I V ++SQK I+IG
Sbjct: 185 ERFFISEIIREKILLNYQKEIPYSVEIEVQEFKEGAKRTD-IRAVIHVSRDSQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK L +R +IE FL K+VYLE+ VKV ++WR + LK++GY
Sbjct: 244 QGKALKKLGIDSRKEIELFLGKQVYLELYVKVSKDWRDQDNFLKNFGY 291
>gi|406670953|ref|ZP_11078198.1| GTP-binding protein Era [Facklamia hominis CCUG 36813]
gi|405582469|gb|EKB56475.1| GTP-binding protein Era [Facklamia hominis CCUG 36813]
Length = 306
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 186/293 (63%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL NQ++GQK++I+++K QTTR+RI G+ + + Q++ DTPGI
Sbjct: 12 HSGFVALVGRPNVGKSTLLNQIVGQKIAIMSDKAQTTRNRIQGVYTREQAQIVFIDTPGI 71
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
+ K H L M+K SA D I VLV+A + D+ + + V + K+P+ LV+
Sbjct: 72 HKPK-HELGEFMVKTAYSALNGVDAICVLVNASEKMGPGDQFVIDKV--REAKVPVFLVV 128
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK DLI P ++ +E Y+ + + VIP+SAK G ++ + D ++ K+P GP YYP D
Sbjct: 129 NKIDLIHPDDLLPLIESYQALFNFEAVIPISAKEGINIQALLDTLVAKMPNGPQYYPADQ 188
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V +HPE F V E+IREKI + R E+P++ V V S + P K +Q I+VE+ SQK
Sbjct: 189 VMDHPEYFVVSELIREKILLLTREEIPHSVAVQVHSMQRNPDDKVEVQASIIVERKSQKG 248
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG GK +K + + AR DIE+ L KVYL++ VKV+++WR + L GY
Sbjct: 249 IIIGHQGKMIKKIGSLARRDIENLLADKVYLDLWVKVQKDWRDRQANLNDLGY 301
>gi|110639447|ref|YP_679656.1| GTP-binding protein Era [Cytophaga hutchinsonii ATCC 33406]
gi|110282128|gb|ABG60314.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 298
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 190/291 (65%), Gaps = 11/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PN GKSTL N ++G++LSI+T K QTTRHR++GI + PE+Q++ DTPG+IE K
Sbjct: 13 SIIGRPNAGKSTLMNCLVGERLSIITPKAQTTRHRVMGIINDPEFQIVYSDTPGVIEPKY 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ S MM+ V + +AD I+ ++D K PE +L+ + ++P+LLVLNK DL
Sbjct: 73 ELQKS-MMRFVDFSLEDADMILWVLD-VKDPEDHALVLQRL---NNVEVPVLLVLNKIDL 127
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
EI +E W +F D ++ VSA + + W+L+ LP P +Y KD +++
Sbjct: 128 STQEEIDALVEKWKAEFPKADSILAVSALKNFNSDMVLKWVLSHLPQHPPFYDKDELTDK 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PERFF EI REKIF Y E+PY+ +V + S+K + KD ++++ I+VE++SQK I+
Sbjct: 188 PERFFASEIFREKIFKNYSKEIPYSSEVLIESFKDQ---KDLLRIQAVIIVERDSQKGIV 244
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IG+GG+ALK AT AR +E+F KKV+LE VKV+ +WR E L+ +GY
Sbjct: 245 IGQGGEALKRTATQARKSMEEFFGKKVFLETFVKVEPDWRSKEFYLRQFGY 295
>gi|334365894|ref|ZP_08514843.1| ribosome biogenesis GTPase Era [Alistipes sp. HGB5]
gi|390947946|ref|YP_006411706.1| GTP-binding protein Era [Alistipes finegoldii DSM 17242]
gi|313158000|gb|EFR57406.1| ribosome biogenesis GTPase Era [Alistipes sp. HGB5]
gi|390424515|gb|AFL79021.1| GTP-binding protein Era [Alistipes finegoldii DSM 17242]
Length = 293
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 186/295 (63%), Gaps = 11/295 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G+KLSI+T+K QTTRHRI+GI SG ++Q++ DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSTLMNALVGEKLSIITSKAQTTRHRIMGIVSGEDFQIVYSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK-LPILL 227
I+ K + L MMK V A +AD I+ + D + +R EI +G ++ +P ++
Sbjct: 62 IL-KPSYKLQESMMKFVTGAVTDADVILYVTDTVEQGDRSAEI----IGRIRESGIPTVV 116
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK DL P + ++ + + +++P SAK +E + IL LP GPA+YPK
Sbjct: 117 VINKIDLSTPEALDALVDKWRQELPEAQIVPASAKENFNIEGLFKTILALLPEGPAFYPK 176
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
+ +++ RFF EIIREKI Y E+PY C++ + SY+ PT D I I V ++SQ
Sbjct: 177 ETLTDKTLRFFASEIIREKILKFYDKEIPYCCEIEIDSYREEPTI-DRIAATIYVARDSQ 235
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIG G+ LK + AR D+E+FL KKV+L++ VKV ++WR +E L+ +GY
Sbjct: 236 KGILIGHKGEKLKRVGQTAREDMEEFLGKKVFLQLFVKVSDDWRNNERQLRRFGY 290
>gi|293571622|ref|ZP_06682643.1| GTP-binding protein Era [Enterococcus faecium E980]
gi|291608292|gb|EFF37593.1| GTP-binding protein Era [Enterococcus faecium E980]
Length = 299
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 190/296 (64%), Gaps = 7/296 (2%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIVIGKGGKMLKQVGTKARKDIENLLGDKVFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|312131517|ref|YP_003998857.1| GTP-binding protein era [Leadbetterella byssophila DSM 17132]
gi|311908063|gb|ADQ18504.1| GTP-binding protein Era [Leadbetterella byssophila DSM 17132]
Length = 295
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 197/295 (66%), Gaps = 16/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSG--PEY--QMILYDTPGII 170
S++GKPNVGKSTL NQ++G+KLSI+T+K QTTRHRI+GI +G PE+ QM+ DTPGII
Sbjct: 10 SIVGKPNVGKSTLMNQLVGEKLSIITSKAQTTRHRIMGIVNGETPEFDFQMVYSDTPGII 69
Query: 171 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL-PILLVL 229
K ++ L MM+ V + + D I+ + D E+ DE E+ + K+ PI+L++
Sbjct: 70 -KPVYELHKSMMEFVHGSIEDGDVILFVTDIY---EKYDE--EDVIERLKNATSPIILII 123
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK DL KP +I +K++ ++ E++ +SA G GV + D IL LP+ P Y+PKD
Sbjct: 124 NKIDLAKPEDIEEKIQHWKAVFQPTEILTLSALQGEGVPQLMDRILHYLPVHPPYFPKDE 183
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQ 347
+++ PERFF E+IREKIF+ Y+ EVPY+C+V + ++K + D I++ EI VE+++Q
Sbjct: 184 LTDKPERFFAAEMIREKIFLNYKKEVPYSCEVVITAFK---ESDDLIRISSEIYVERSTQ 240
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ IL+G G+ +K + AR ++E F KKV+LE +KV+ +WRQ + L+ +GY
Sbjct: 241 RAILLGHKGERIKKVGIEAREEMEKFFGKKVFLEQYIKVEPDWRQQKIKLQGFGY 295
>gi|417653468|ref|ZP_12303199.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21193]
gi|329733159|gb|EGG69496.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21193]
Length = 299
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEKLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|390943152|ref|YP_006406913.1| GTP-binding protein Era [Belliella baltica DSM 15883]
gi|390416580|gb|AFL84158.1| GTP-binding protein Era [Belliella baltica DSM 15883]
Length = 296
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 194/290 (66%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+G+ + +YQ++ DTPG+++ K
Sbjct: 12 NIVGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGLINDDDYQIVFSDTPGMLKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V + +AD I+ + D + E I++++E+ ++ +P+LLV+NK DL
Sbjct: 71 YELHKNMMSFVHMSLEDADVILFVTDLFETDEEIEDVIEKI---NQSGVPVLLVINKVDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
K G++ + ++ + + VIP+SA E I IL +LP+ P +Y K +++ P
Sbjct: 128 SKEGQLEEVTAYWTQRIKTEAVIPISATESFNTERILQEILDRLPVHPPFYDKAELTDKP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFF EI+REKIF+ Y+ E+PY+ +V + + ++ I+V I VE+NSQK I+I
Sbjct: 188 ERFFASEIVREKIFLNYKKEIPYSTEVAIEDFYEE---ENIIRVRAIIYVERNSQKGIII 244
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+GGKALK + AR ++E+F KK++LE VKV+++WR+++ LK +GY
Sbjct: 245 GEGGKALKRVGIQARAEMENFFGKKIFLETYVKVEDDWRKNKNKLKKFGY 294
>gi|120437318|ref|YP_863004.1| GTP-binding protein Era [Gramella forsetii KT0803]
gi|117579468|emb|CAL67937.1| GTP-binding protein Era [Gramella forsetii KT0803]
Length = 295
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 185/295 (62%), Gaps = 19/295 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N IG++LSI+T+K QTTRHRILGI +G ++QMIL DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFIGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
+ L + MM V+SA +AD ++ +V EI EEG+ D ++P+LL
Sbjct: 68 YELQASMMDFVKSAFEDADVLIYIV----------EIGEEGLKDEAFFNKISNSEVPVLL 117
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+LNK D ++ ++++++ + E+ P+SA G V + + I+ LP PA+YPK
Sbjct: 118 LLNKIDKSNQEQLEEQVQYWAEKVPTAEIHPISALEGFNVPAVFNRIIELLPESPAFYPK 177
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++ PERFFV EIIREKI M Y+ E+PY+ ++ + + I+VE+++Q
Sbjct: 178 DTLTDKPERFFVNEIIREKILMHYKKEIPYSVEIETNEFFEEEKIIRMRSI-IMVERDTQ 236
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IG G ALK + AR D+E F K+V+LE+ VKV +NWR D L+ +GY
Sbjct: 237 KGIIIGHKGAALKRVGVEARKDLEKFFGKQVHLELYVKVNKNWRSDSNQLRRFGY 291
>gi|326797796|ref|YP_004315615.1| GTP-binding protein Era [Sphingobacterium sp. 21]
gi|326548560|gb|ADZ76945.1| GTP-binding protein Era-like-protein [Sphingobacterium sp. 21]
Length = 292
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 184/288 (63%), Gaps = 6/288 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPN GKSTL N ++G+K+SIVT K QTTRHRILGI + +YQ++ DTPG+I K
Sbjct: 9 SIVGKPNAGKSTLMNSLVGEKMSIVTPKAQTTRHRILGIVNEEDYQIVFSDTPGVI-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V + ++AD I+ + D + + D ++E+ K P+++++NK D
Sbjct: 68 YSLQESMMNFVHGSLVDADIILFVTDINEKYDETD-VIEKL---QKTDSPVVVLVNKIDK 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K+ ++++ D + +SA GH ++ + ++L LP+ P +Y KD +++
Sbjct: 124 SNEDDVKAKINYWQETLDPTAIFAISALLGHNIQAVFQFVLEHLPVHPPFYEKDELTDKS 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E++REKIF Y E+PY+ +V V S+K I EI+VE++SQK I+IG
Sbjct: 184 ERFFVSEMVREKIFKLYEKEIPYSTEVIVTSFKEEEQLVR-ISAEIIVERDSQKNIIIGT 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG +K + T AR DIE+FLQKKV+LE+ VKV +WR + LK +GY
Sbjct: 243 GGSMIKKVGTYARQDIEEFLQKKVFLELFVKVISDWRSKKNYLKRFGY 290
>gi|253732220|ref|ZP_04866385.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|418599998|ref|ZP_13163472.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21343]
gi|253724009|gb|EES92738.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|374395587|gb|EHQ66850.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21343]
Length = 299
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIFVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|189502490|ref|YP_001958207.1| GTP-binding protein Era [Candidatus Amoebophilus asiaticus 5a2]
gi|226741166|sp|B3ETC6.1|ERA_AMOA5 RecName: Full=GTPase Era
gi|189497931|gb|ACE06478.1| hypothetical protein Aasi_1141 [Candidatus Amoebophilus asiaticus
5a2]
Length = 296
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 190/291 (65%), Gaps = 11/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N+++G++LSI+T K QTTRH I GI S ++Q+I DTPGI+ K
Sbjct: 12 TIIGKPNVGKSTLMNRLVGERLSIITPKAQTTRHSICGIVSDTDFQIIFTDTPGIL-KPA 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK--APERIDEILEEGVGDHKDKLPILLVLNKK 232
+ L MM ++ A ++ D ++ LVD + P ++++L +G ++P+LL++NK
Sbjct: 71 YELQESMMHMLQHALVDTDVLLWLVDIKEKEVPPIVEKVLAQG------RIPVLLLINKI 124
Query: 233 DLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
DLI E + L E++++ +V ++IP++A G +E + IL LP P +YPKD+++
Sbjct: 125 DLIAGQEALESLVEYWKQKVNVAQIIPIAALQGFQIEQLLKHILVYLPAHPPFYPKDMLT 184
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ PERFFV EIIRE+I +Y+ E+PYA +V + +K + I I VEK SQK IL
Sbjct: 185 DRPERFFVAEIIREQILYKYQQEIPYAVEVVIEEFKEEASLIR-ISAMIYVEKKSQKGIL 243
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G++LK + AAR +E FL+K+V+L+ VKV WR LL+ +GY
Sbjct: 244 IGKQGESLKQVGIAARQALEKFLEKQVFLQQHVKVLPGWRSQNKLLQRFGY 294
>gi|418978290|ref|ZP_13526091.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus DR10]
gi|379993906|gb|EIA15351.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus DR10]
Length = 299
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEQIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|91201100|emb|CAJ74159.1| strongly similar to GTP-binding protein Era [Candidatus Kuenenia
stuttgartiensis]
Length = 301
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +G KLSIVT+KPQTTR +I+GI + +YQ+I +DTPGIIE
Sbjct: 16 AVIGEPNVGKSTLINNYMGCKLSIVTHKPQTTRKKIMGILTKEDYQIIFFDTPGIIEPT- 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K S AD ++++V+ K P +I + + + PILLV+NK D+
Sbjct: 75 YELQKYMVKTAYSVIKEADILLMMVEPFKQPAKIHRDVVKKLATFNK--PILLVINKVDM 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++ + Y E+IP+SAK G +E + I+ LP G YP+D ++++
Sbjct: 133 VEKDKLLPIIASYNTLMKFSEIIPISAKEGTNLERLLSLIVQYLPEGEPLYPEDSITDYN 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF EIIREK+F Y E+PY+ V + +K R +D+I+ I VE+ SQK I+IG+
Sbjct: 193 ERFLAAEIIREKVFEFYGEEIPYSSTVEIEEFKEREKGRDYIKAIIYVERKSQKGIIIGE 252
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKA+K + AR DIED L ++V+LE+ VKV E WR+D LK GY
Sbjct: 253 EGKAIKHVGVIARKDIEDQLGREVFLELHVKVMEKWRKDTHKLKRLGY 300
>gi|15924557|ref|NP_372091.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu50]
gi|15927147|ref|NP_374680.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus N315]
gi|21283248|ref|NP_646336.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MW2]
gi|49483815|ref|YP_041039.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486402|ref|YP_043623.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651960|ref|YP_186464.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus COL]
gi|87161238|ref|YP_494222.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|148268051|ref|YP_001246994.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH9]
gi|150394119|ref|YP_001316794.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH1]
gi|151221682|ref|YP_001332504.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979885|ref|YP_001442144.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu3]
gi|161509795|ref|YP_001575454.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140013|ref|ZP_03564506.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253316042|ref|ZP_04839255.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253733183|ref|ZP_04867348.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006353|ref|ZP_05144954.2| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425692|ref|ZP_05602116.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428353|ref|ZP_05604751.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430990|ref|ZP_05607370.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
68-397]
gi|257433678|ref|ZP_05610036.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus E1410]
gi|257436592|ref|ZP_05612636.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M876]
gi|257793643|ref|ZP_05642622.1| GTP-binding protein Era [Staphylococcus aureus A9781]
gi|258411057|ref|ZP_05681337.1| GTP-binding protein Era [Staphylococcus aureus A9763]
gi|258420139|ref|ZP_05683094.1| GTP-binding protein Era [Staphylococcus aureus A9719]
gi|258423995|ref|ZP_05686877.1| GTP-binding protein Era [Staphylococcus aureus A9635]
gi|258437399|ref|ZP_05689383.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258443605|ref|ZP_05691944.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258446812|ref|ZP_05694966.1| GTP-binding protein Era [Staphylococcus aureus A6300]
gi|258448726|ref|ZP_05696838.1| GTP-binding protein Era [Staphylococcus aureus A6224]
gi|258450604|ref|ZP_05698666.1| GTP-binding protein Era [Staphylococcus aureus A5948]
gi|258453543|ref|ZP_05701521.1| GTP-binding protein Era [Staphylococcus aureus A5937]
gi|262051227|ref|ZP_06023451.1| hypothetical protein SA930_1658 [Staphylococcus aureus 930918-3]
gi|269203195|ref|YP_003282464.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ED98]
gi|282893068|ref|ZP_06301302.1| GTP-binding protein Era [Staphylococcus aureus A8117]
gi|282904149|ref|ZP_06312037.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C160]
gi|282905976|ref|ZP_06313831.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908886|ref|ZP_06316704.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911205|ref|ZP_06319007.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914374|ref|ZP_06322160.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M899]
gi|282916837|ref|ZP_06324595.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus D139]
gi|282919343|ref|ZP_06327078.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C427]
gi|282920116|ref|ZP_06327841.1| GTP-binding protein Era [Staphylococcus aureus A9765]
gi|282924668|ref|ZP_06332336.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C101]
gi|282928200|ref|ZP_06335805.1| GTP-binding protein Era [Staphylococcus aureus A10102]
gi|283958331|ref|ZP_06375782.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503448|ref|ZP_06667295.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
58-424]
gi|293510465|ref|ZP_06669171.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M809]
gi|293531005|ref|ZP_06671687.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M1015]
gi|294848598|ref|ZP_06789344.1| GTP-binding protein Era [Staphylococcus aureus A9754]
gi|295406690|ref|ZP_06816495.1| GTP-binding protein Era [Staphylococcus aureus A8819]
gi|295428145|ref|ZP_06820777.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275811|ref|ZP_06858318.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MR1]
gi|297207714|ref|ZP_06924149.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245728|ref|ZP_06929593.1| GTP-binding protein Era [Staphylococcus aureus A8796]
gi|297590889|ref|ZP_06949527.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MN8]
gi|300911795|ref|ZP_07129238.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH70]
gi|304380844|ref|ZP_07363504.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379021349|ref|YP_005298011.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M013]
gi|384547800|ref|YP_005737053.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|384550394|ref|YP_005739646.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384864788|ref|YP_005750147.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384867459|ref|YP_005747655.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH60]
gi|384870108|ref|YP_005752822.1| GTP-binding protein era -like protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781852|ref|YP_005758023.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
11819-97]
gi|386729268|ref|YP_006195651.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus 71193]
gi|386831177|ref|YP_006237831.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387150710|ref|YP_005742274.1| GTP-binding protein Era [Staphylococcus aureus 04-02981]
gi|387602907|ref|YP_005734428.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ST398]
gi|387780659|ref|YP_005755457.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|404478918|ref|YP_006710348.1| GTP-binding protein [Staphylococcus aureus 08BA02176]
gi|415682369|ref|ZP_11447685.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS00]
gi|415686245|ref|ZP_11450382.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS01]
gi|415692685|ref|ZP_11454605.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS03]
gi|416840036|ref|ZP_11903355.1| GTP-binding protein Era [Staphylococcus aureus O11]
gi|416845845|ref|ZP_11906246.1| GTP-binding protein Era [Staphylococcus aureus O46]
gi|417651227|ref|ZP_12300990.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21172]
gi|417797559|ref|ZP_12444755.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21305]
gi|417798965|ref|ZP_12446119.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21310]
gi|417801413|ref|ZP_12448505.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21318]
gi|417887890|ref|ZP_12532009.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21195]
gi|417890050|ref|ZP_12534129.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21200]
gi|417892426|ref|ZP_12536475.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21201]
gi|417897969|ref|ZP_12541895.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21259]
gi|417901150|ref|ZP_12545027.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21266]
gi|417905376|ref|ZP_12549187.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21269]
gi|418276922|ref|ZP_12891676.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21178]
gi|418285037|ref|ZP_12897737.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21209]
gi|418308256|ref|ZP_12919894.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21194]
gi|418309957|ref|ZP_12921507.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21331]
gi|418313209|ref|ZP_12924703.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21334]
gi|418316490|ref|ZP_12927928.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21340]
gi|418319447|ref|ZP_12930827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21232]
gi|418321275|ref|ZP_12932621.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
VCU006]
gi|418424716|ref|ZP_12997830.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS1]
gi|418427710|ref|ZP_13000715.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS2]
gi|418430552|ref|ZP_13003463.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433695|ref|ZP_13006287.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS4]
gi|418437190|ref|ZP_13008986.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS5]
gi|418440090|ref|ZP_13011791.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS6]
gi|418443108|ref|ZP_13014707.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS7]
gi|418446170|ref|ZP_13017644.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS8]
gi|418449184|ref|ZP_13020570.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS9]
gi|418451997|ref|ZP_13023331.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS10]
gi|418454991|ref|ZP_13026250.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457869|ref|ZP_13029068.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418558855|ref|ZP_13123402.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21252]
gi|418562370|ref|ZP_13126827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21262]
gi|418564841|ref|ZP_13129262.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21264]
gi|418569501|ref|ZP_13133827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21283]
gi|418574483|ref|ZP_13138652.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21333]
gi|418579492|ref|ZP_13143587.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418582494|ref|ZP_13146572.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597115|ref|ZP_13160648.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21342]
gi|418601032|ref|ZP_13164480.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21345]
gi|418640362|ref|ZP_13202594.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-3]
gi|418641908|ref|ZP_13204113.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-24]
gi|418648365|ref|ZP_13210409.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-88]
gi|418650550|ref|ZP_13212568.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-91]
gi|418652846|ref|ZP_13214809.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-99]
gi|418657645|ref|ZP_13219408.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-105]
gi|418659213|ref|ZP_13220901.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-111]
gi|418662171|ref|ZP_13223725.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-122]
gi|418873233|ref|ZP_13427543.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-125]
gi|418875507|ref|ZP_13429763.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418878485|ref|ZP_13432720.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881251|ref|ZP_13435468.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884099|ref|ZP_13438292.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418886832|ref|ZP_13440980.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418889382|ref|ZP_13443515.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418892297|ref|ZP_13446410.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418895330|ref|ZP_13449425.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418898201|ref|ZP_13452271.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901072|ref|ZP_13455128.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418903874|ref|ZP_13457915.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418906512|ref|ZP_13460538.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418909419|ref|ZP_13463415.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG149]
gi|418912178|ref|ZP_13466159.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914669|ref|ZP_13468640.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418917464|ref|ZP_13471423.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418920648|ref|ZP_13474580.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418923249|ref|ZP_13477165.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418925827|ref|ZP_13479729.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418928917|ref|ZP_13482803.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418931872|ref|ZP_13485707.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418934537|ref|ZP_13488359.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418946526|ref|ZP_13498949.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-157]
gi|418950580|ref|ZP_13502741.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-160]
gi|418955626|ref|ZP_13507563.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-189]
gi|418982573|ref|ZP_13530281.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986239|ref|ZP_13533924.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1500]
gi|418988634|ref|ZP_13536306.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418991495|ref|ZP_13539156.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418994293|ref|ZP_13541928.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG290]
gi|419773173|ref|ZP_14299184.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CO-23]
gi|419784712|ref|ZP_14310475.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-M]
gi|422742649|ref|ZP_16796652.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422746140|ref|ZP_16800073.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424768972|ref|ZP_18196209.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
CM05]
gi|424785402|ref|ZP_18212205.1| GTP-binding protein Era [Staphylococcus aureus CN79]
gi|440707444|ref|ZP_20888143.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21282]
gi|443637645|ref|ZP_21121717.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21236]
gi|448740606|ref|ZP_21722582.1| GTP-binding protein Era [Staphylococcus aureus KT/314250]
gi|448743083|ref|ZP_21724997.1| GTP-binding protein Era [Staphylococcus aureus KT/Y21]
gi|54037042|sp|P64085.1|ERA_STAAN RecName: Full=GTPase Era
gi|54037043|sp|P64086.1|ERA_STAAW RecName: Full=GTPase Era
gi|54040763|sp|P64084.1|ERA_STAAM RecName: Full=GTPase Era
gi|56748908|sp|Q6G900.1|ERA_STAAS RecName: Full=GTPase Era
gi|56748919|sp|Q6GGD3.1|ERA_STAAR RecName: Full=GTPase Era
gi|81694385|sp|Q5HFJ3.1|ERA_STAAC RecName: Full=GTPase Era
gi|123485633|sp|Q2FGF6.1|ERA_STAA3 RecName: Full=GTPase Era
gi|189037668|sp|A7X2W5.1|ERA_STAA1 RecName: Full=GTPase Era
gi|189037669|sp|A6U239.1|ERA_STAA2 RecName: Full=GTPase Era
gi|189037670|sp|A5IT95.1|ERA_STAA9 RecName: Full=GTPase Era
gi|189037671|sp|A6QHB0.1|ERA_STAAE RecName: Full=GTPase Era
gi|189037672|sp|A8Z4A6.1|ERA_STAAT RecName: Full=GTPase Era
gi|13701365|dbj|BAB42659.1| bex [Staphylococcus aureus subsp. aureus N315]
gi|14247338|dbj|BAB57729.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204688|dbj|BAB95384.1| bex [Staphylococcus aureus subsp. aureus MW2]
gi|49241944|emb|CAG40639.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244845|emb|CAG43306.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286146|gb|AAW38240.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus COL]
gi|87127212|gb|ABD21726.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|147741120|gb|ABQ49418.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH9]
gi|149946571|gb|ABR52507.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH1]
gi|150374482|dbj|BAF67742.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722020|dbj|BAF78437.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus Mu3]
gi|160368604|gb|ABX29575.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253728723|gb|EES97452.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271386|gb|EEV03532.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275194|gb|EEV06681.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278420|gb|EEV09056.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
68-397]
gi|257281771|gb|EEV11908.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus E1410]
gi|257283943|gb|EEV14066.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M876]
gi|257787615|gb|EEV25955.1| GTP-binding protein Era [Staphylococcus aureus A9781]
gi|257840207|gb|EEV64671.1| GTP-binding protein Era [Staphylococcus aureus A9763]
gi|257843850|gb|EEV68244.1| GTP-binding protein Era [Staphylococcus aureus A9719]
gi|257845616|gb|EEV69648.1| GTP-binding protein Era [Staphylococcus aureus A9635]
gi|257848604|gb|EEV72592.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257851011|gb|EEV74954.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257854387|gb|EEV77336.1| GTP-binding protein Era [Staphylococcus aureus A6300]
gi|257858004|gb|EEV80893.1| GTP-binding protein Era [Staphylococcus aureus A6224]
gi|257861762|gb|EEV84561.1| GTP-binding protein Era [Staphylococcus aureus A5948]
gi|257864274|gb|EEV87024.1| GTP-binding protein Era [Staphylococcus aureus A5937]
gi|259160864|gb|EEW45884.1| hypothetical protein SA930_1658 [Staphylococcus aureus 930918-3]
gi|262075485|gb|ACY11458.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ED98]
gi|282313503|gb|EFB43898.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C101]
gi|282317153|gb|EFB47527.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C427]
gi|282319324|gb|EFB49676.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus D139]
gi|282321555|gb|EFB51880.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M899]
gi|282324900|gb|EFB55210.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327150|gb|EFB57445.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331268|gb|EFB60782.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590007|gb|EFB95089.1| GTP-binding protein Era [Staphylococcus aureus A10102]
gi|282594464|gb|EFB99449.1| GTP-binding protein Era [Staphylococcus aureus A9765]
gi|282595767|gb|EFC00731.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C160]
gi|282764386|gb|EFC04512.1| GTP-binding protein Era [Staphylococcus aureus A8117]
gi|283470845|emb|CAQ50056.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ST398]
gi|283790480|gb|EFC29297.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285817249|gb|ADC37736.1| GTP-binding protein Era [Staphylococcus aureus 04-02981]
gi|290920273|gb|EFD97339.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M1015]
gi|291095114|gb|EFE25379.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
58-424]
gi|291466829|gb|EFF09349.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M809]
gi|294824624|gb|EFG41047.1| GTP-binding protein Era [Staphylococcus aureus A9754]
gi|294968437|gb|EFG44461.1| GTP-binding protein Era [Staphylococcus aureus A8819]
gi|295128503|gb|EFG58137.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887731|gb|EFH26629.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177379|gb|EFH36631.1| GTP-binding protein Era [Staphylococcus aureus A8796]
gi|297575775|gb|EFH94491.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MN8]
gi|298694849|gb|ADI98071.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|300886041|gb|EFK81243.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH70]
gi|302333243|gb|ADL23436.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
JKD6159]
gi|304340571|gb|EFM06505.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312437964|gb|ADQ77035.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH60]
gi|312829955|emb|CBX34797.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129845|gb|EFT85835.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS03]
gi|315195469|gb|EFU25856.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS00]
gi|315198738|gb|EFU29066.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS01]
gi|320140548|gb|EFW32402.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144085|gb|EFW35854.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440465|gb|EGA98177.1| GTP-binding protein Era [Staphylococcus aureus O11]
gi|323443239|gb|EGB00857.1| GTP-binding protein Era [Staphylococcus aureus O46]
gi|329314243|gb|AEB88656.1| GTP-binding protein era -like protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329727411|gb|EGG63867.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21172]
gi|334267051|gb|EGL85521.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21305]
gi|334275127|gb|EGL93428.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21310]
gi|334276862|gb|EGL95108.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21318]
gi|341843652|gb|EGS84874.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21269]
gi|341846309|gb|EGS87506.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21266]
gi|341849471|gb|EGS90614.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21259]
gi|341855743|gb|EGS96587.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21200]
gi|341856919|gb|EGS97746.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21195]
gi|341857591|gb|EGS98403.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21201]
gi|344177761|emb|CCC88240.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|359830658|gb|AEV78636.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M013]
gi|364522841|gb|AEW65591.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
11819-97]
gi|365172048|gb|EHM62793.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21209]
gi|365173905|gb|EHM64334.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21178]
gi|365225507|gb|EHM66750.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
VCU006]
gi|365236480|gb|EHM77369.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21334]
gi|365237414|gb|EHM78260.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21331]
gi|365240447|gb|EHM81223.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21194]
gi|365240566|gb|EHM81338.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21232]
gi|365241174|gb|EHM81929.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21340]
gi|371973474|gb|EHO90822.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21262]
gi|371975978|gb|EHO93270.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21264]
gi|371976205|gb|EHO93495.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21252]
gi|371979210|gb|EHO96445.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21333]
gi|371985630|gb|EHP02691.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21283]
gi|374395351|gb|EHQ66618.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21342]
gi|374400279|gb|EHQ71398.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21345]
gi|375014926|gb|EHS08597.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-3]
gi|375018363|gb|EHS11943.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-24]
gi|375021014|gb|EHS14521.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-99]
gi|375026278|gb|EHS19661.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-88]
gi|375027836|gb|EHS21194.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-91]
gi|375030125|gb|EHS23449.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-105]
gi|375036211|gb|EHS29289.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-111]
gi|375037116|gb|EHS30170.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-122]
gi|375366424|gb|EHS70421.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-125]
gi|375370712|gb|EHS74510.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-189]
gi|375376683|gb|EHS80207.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-160]
gi|375377871|gb|EHS81308.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-157]
gi|377694607|gb|EHT18972.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695136|gb|EHT19500.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377697519|gb|EHT21874.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377702469|gb|EHT26791.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377704283|gb|EHT28593.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377704854|gb|EHT29163.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710904|gb|EHT35142.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377713050|gb|EHT37263.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377714434|gb|EHT38635.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377717727|gb|EHT41902.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377722435|gb|EHT46561.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG547]
gi|377723617|gb|EHT47742.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377725785|gb|EHT49898.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377730591|gb|EHT54658.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377730994|gb|EHT55052.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377735208|gb|EHT59244.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377738829|gb|EHT62838.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377742889|gb|EHT66874.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377744090|gb|EHT68068.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG290]
gi|377744896|gb|EHT68873.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377750638|gb|EHT74576.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377752066|gb|EHT75990.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG149]
gi|377752890|gb|EHT76808.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377756995|gb|EHT80891.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377761236|gb|EHT85112.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|377763417|gb|EHT87273.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377764374|gb|EHT88227.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377769579|gb|EHT93347.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377770631|gb|EHT94392.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC128]
gi|383363922|gb|EID41248.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-M]
gi|383972997|gb|EID89018.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CO-23]
gi|384230561|gb|AFH69808.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus 71193]
gi|385196569|emb|CCG16198.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387717998|gb|EIK05993.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS2]
gi|387718292|gb|EIK06276.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719495|gb|EIK07440.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS1]
gi|387724919|gb|EIK12550.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS4]
gi|387727178|gb|EIK14710.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS5]
gi|387730240|gb|EIK17647.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS6]
gi|387735308|gb|EIK22437.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS8]
gi|387736784|gb|EIK23872.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS7]
gi|387736947|gb|EIK24033.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS9]
gi|387744878|gb|EIK31642.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS10]
gi|387745044|gb|EIK31806.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746637|gb|EIK33366.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402348363|gb|EJU83355.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
CM05]
gi|404440407|gb|AFR73600.1| putative GTP-binding protein [Staphylococcus aureus 08BA02176]
gi|408423688|emb|CCJ11099.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408425678|emb|CCJ13065.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408427665|emb|CCJ15028.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408429654|emb|CCJ26819.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408431641|emb|CCJ18956.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408433635|emb|CCJ20920.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408435627|emb|CCJ22887.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408437611|emb|CCJ24854.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|421956812|gb|EKU09141.1| GTP-binding protein Era [Staphylococcus aureus CN79]
gi|436506200|gb|ELP42039.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21282]
gi|443405216|gb|ELS63824.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21236]
gi|445548573|gb|ELY16823.1| GTP-binding protein Era [Staphylococcus aureus KT/314250]
gi|445563770|gb|ELY19927.1| GTP-binding protein Era [Staphylococcus aureus KT/Y21]
Length = 299
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|417897108|ref|ZP_12541051.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21235]
gi|341840374|gb|EGS81894.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21235]
Length = 299
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEML--ENVKTPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|82751170|ref|YP_416911.1| GTP-binding protein Era [Staphylococcus aureus RF122]
gi|123547823|sp|Q2YT12.1|ERA_STAAB RecName: Full=GTPase Era
gi|82656701|emb|CAI81128.1| GTP-binding protein [Staphylococcus aureus RF122]
Length = 299
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALDGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|418284070|ref|ZP_12896802.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21202]
gi|365164934|gb|EHM56764.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21202]
Length = 299
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELIPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|418645203|ref|ZP_13207331.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-55]
gi|421148553|ref|ZP_15608213.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443639997|ref|ZP_21123997.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21196]
gi|375024036|gb|EHS17481.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-55]
gi|394331696|gb|EJE57779.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443406272|gb|ELS64856.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21196]
Length = 299
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQTYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|387143174|ref|YP_005731567.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
TW20]
gi|269941057|emb|CBI49441.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
TW20]
Length = 299
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKENEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|283770643|ref|ZP_06343535.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus H19]
gi|283460790|gb|EFC07880.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus H19]
Length = 299
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L K+YLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKIYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|161353525|ref|YP_500179.2| GTP-binding protein Era [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|379014775|ref|YP_005291011.1| GTPase Era [Staphylococcus aureus subsp. aureus VC40]
gi|417649235|ref|ZP_12299039.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21189]
gi|440735018|ref|ZP_20914629.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus DSM
20231]
gi|317374940|sp|Q2FY06.2|ERA_STAA8 RecName: Full=GTPase Era
gi|329728341|gb|EGG64778.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21189]
gi|374363472|gb|AEZ37577.1| GTPase Era [Staphylococcus aureus subsp. aureus VC40]
gi|436431113|gb|ELP28467.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus DSM
20231]
Length = 299
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE+ SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERGSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|163786092|ref|ZP_02180540.1| putative GTP-binding protein [Flavobacteriales bacterium ALC-1]
gi|159877952|gb|EDP72008.1| putative GTP-binding protein [Flavobacteriales bacterium ALC-1]
Length = 293
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 185/289 (64%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N IG+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFIGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPGII-KPA 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + + DE + + + K+P+LL+LNK D
Sbjct: 67 YELQTSMMDFVKSAFEDADVLIYMVEIGEKALK-DEAFFKKITN--SKIPVLLLLNKIDN 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++ E ++ E P+SA G V+++ D I+ LP PA+YPKD +++ P
Sbjct: 124 SNQEQLEEQAELWQSKVPNAEFYPISALKGFNVQNVFDRIIELLPESPAFYPKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI M Y+ E+PYA +V+ + V I+VE+ +QK I+IG
Sbjct: 184 ERFFVNEAIREKILMHYKKEIPYAVEVDTEEFFEEEKIIRMRSV-IMVERETQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR D+E F K+V+LE+ VKV +NWR ++ L+ +GY
Sbjct: 243 KGSALKRVGVEARKDLEKFFGKQVHLELYVKVNKNWRSNQNQLRRFGYN 291
>gi|150010993|gb|ABR57154.1| GTP-binding protein Era [Staphylococcus xylosus]
Length = 299
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ + D I+ +V+ + R DE + E + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMEML--KTIKTPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++E Y+++ D E++P+SA GH V+ + + + LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPRIEKYKRYLDFTEIVPISALEGHNVDHFINVLKSYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGE+IREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGELIREKILHLTSEEIPHAIGVNVDRMVKEDEDRVRIEATIFVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + ARLDIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARLDIERLLGSKVYLELWVKVQKDWRNKVNFIRQMGY 294
>gi|332876945|ref|ZP_08444698.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332685053|gb|EGJ57897.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 293
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 186/293 (63%), Gaps = 9/293 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGII-KPA 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ L MM V+ A +AD ++ +V+ + + EE D +KL PILL++NK
Sbjct: 67 YALQESMMAFVKDAFDDADILIYMVEIGEKGLK-----EEAFFDRINKLNIPILLLINKI 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + + +++ ++++ EV P+SA +++ D IL LP PA++PKD +++
Sbjct: 122 DTSEQQVLEEQVAYWKEQVPRAEVYPISALRNFQTKEVFDRILALLPESPAFFPKDQLTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFFV EIIREKI + Y+ EVPY+ +V S+ T I+ I+VE+ SQK I+I
Sbjct: 182 KPERFFVNEIIREKILLHYKKEVPYSVEVTTESFADSETILH-IRSVIMVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G G+ALK + AAR D+E F K+V+LE+ VKV ++WR +E L +GY +
Sbjct: 241 GHKGEALKRVGVAARADLEKFFGKQVHLELFVKVNKDWRSNERQLSRFGYASR 293
>gi|358061039|ref|ZP_09147723.1| GTP-binding protein Era [Staphylococcus simiae CCM 7213]
gi|357256492|gb|EHJ06856.1| GTP-binding protein Era [Staphylococcus simiae CCM 7213]
Length = 299
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNANEDIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+K+ D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEAYQKYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQIGY 294
>gi|372221091|ref|ZP_09499512.1| GTPase Era [Mesoflavibacter zeaxanthinifaciens S86]
Length = 295
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 187/301 (62%), Gaps = 23/301 (7%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI +G ++Q+++ DTPG
Sbjct: 4 HKSGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVNGDDFQVVISDTPG 63
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 221
II K + L + MM V+SA +AD ++ LV EI E+G+ D
Sbjct: 64 II-KPAYELQTSMMDFVKSAFEDADVLLYLV----------EIGEKGLKDEAFFQKIQNS 112
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
K+P+LL+LNK D + + +++++++ E+ P+SA V ++ D IL LP G
Sbjct: 113 KIPVLLLLNKIDTSEQSILEEQIQYWQDLLPRAEIHPISALQNFNVREVFDRILELLPEG 172
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 341
PAYYPKD +++ PERFFV E IREKI + Y+ E+PYA +V + I+ I+
Sbjct: 173 PAYYPKDQITDKPERFFVNETIREKILLNYKKEIPYAVEVETEEF-LEDDDIIRIRSIIM 231
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
VE++SQK I+IG G ALK + AR D+E F K+V++EI VKV +NWR + L+ +G
Sbjct: 232 VERDSQKGIIIGHKGSALKKVGVEARKDLELFFDKQVHIEIYVKVNKNWRSNSNQLRRFG 291
Query: 402 Y 402
Y
Sbjct: 292 Y 292
>gi|379795926|ref|YP_005325924.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872916|emb|CCE59255.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 299
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEDIGRGDEYIMEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + + E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEQYQTYMNFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|326334918|ref|ZP_08201119.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692955|gb|EGD34893.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 292
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 185/290 (63%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T K QTTRHRI GI SG ++QMI DTPGII K
Sbjct: 8 NIIGNPNVGKSTLLNALVGERLSIITAKAQTTRHRIFGIVSGEDFQMIFSDTPGII-KPA 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM VR A +AD ++ +V+ + + +E ++ ++ K+PILL++NK D
Sbjct: 67 YQLQSSMMDFVRDAFEDADILIYMVEIGEKDLKDEEFFKK---INEAKVPILLLVNKIDR 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + L ++++ EV P+SA VE + +L LP PA+YPKD +++ P
Sbjct: 124 SDEPSVKQALSYWQEKVPKAEVYPISALENFNVEPLFHRLLELLPPSPAFYPKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI + Y+ EVPY+ +V +T + I++ I+VE++SQK ILI
Sbjct: 184 ERFFVNETIREKILLNYKKEVPYSVEVET---QTFSETEHIIRIRSIIMVERDSQKGILI 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+ALK + AR D+E F K+++LE+ VKV +NWR D LK +GY
Sbjct: 241 GHKGEALKKVGIQARYDLEKFFGKQIHLELYVKVNKNWRSDLKQLKRFGY 290
>gi|313675799|ref|YP_004053795.1| GTP-binding protein era [Marivirga tractuosa DSM 4126]
gi|312942497|gb|ADR21687.1| GTP-binding protein Era [Marivirga tractuosa DSM 4126]
Length = 294
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 192/292 (65%), Gaps = 13/292 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPNVGKSTL N ++G++LSI+T+K QTTRHRI+GI SG ++Q++ DTPGI+ +
Sbjct: 12 SIVGKPNVGKSTLMNALVGERLSIITSKAQTTRHRIMGILSGADFQIVYSDTPGILSPQY 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHKDKLPILLVLN 230
+ +SMM + V++A +AD ++ + D + E ID I GV PI+L++N
Sbjct: 72 ELHNSMM-RFVKAALEDADIMLFVTDLYEKYEEGDVLIDRIKNSGV-------PIILIMN 123
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D K + K++++ + + D I VSA ++ + + ++ LP+ P Y+PK+ +
Sbjct: 124 KIDQSKGSQAQDKMKYWAEIIEPDHQIMVSALEKVNIDGLFNKLMDLLPVHPPYFPKEEM 183
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++ PE+FFV EIIREKIF Y+ EVPY+C+V V +K T I+ EI VE+ SQK I
Sbjct: 184 TDKPEKFFVEEIIREKIFQNYKKEVPYSCEVVVTEFKEDETIIR-IRAEIYVERKSQKGI 242
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+IGKGG+A+K + +R D+E F K+++LE VKV+++WR+ + LK +GY
Sbjct: 243 IIGKGGEAIKKVGIESRKDLETFFNKQIHLETFVKVEQDWRKKDLKLKRFGY 294
>gi|330752120|emb|CBL87081.1| GTP-binding protein era homolog [uncultured Flavobacteriia
bacterium]
Length = 301
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 185/288 (64%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G +YQM+L DTPG+I K I
Sbjct: 17 TIVGNPNVGKSTLMNAWVGERLSIITSKAQTTRHRILGIINGDDYQMVLSDTPGVI-KPI 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + S MM V+ A +AD ++ +V+ + + E+ G K+P+LL++NK D
Sbjct: 76 YEMQSSMMAFVKGALEDADILIYMVEIGEKEMKDAAFFEKIKGS---KIPLLLLINKIDT 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + ++++ + EV P+SA G V+++ D+I+ KLP GPAYYPKD +++ P
Sbjct: 133 ADQETLMTTIAFWKEMLPMAEVFPISAITGFSVKEVLDYIIDKLPEGPAYYPKDQLTDKP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IRE+I Y E+PY+ +V+ + I+ I+VE+++QK I+IG
Sbjct: 193 ERFFVNEAIREQILQYYSKEIPYSVEVDTEDFFEEDKIIK-IRSVIMVERDTQKGIIIGH 251
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK + AR ++ F KKV+LE+ VKV ++WR + LK +GY
Sbjct: 252 KGTALKRVGVGARKTLQAFFGKKVHLELYVKVNKDWRNNVAQLKRFGY 299
>gi|325285624|ref|YP_004261414.1| GTP-binding protein Era-like-protein [Cellulophaga lytica DSM 7489]
gi|324321078|gb|ADY28543.1| GTP-binding protein Era-like-protein [Cellulophaga lytica DSM 7489]
Length = 294
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 191/291 (65%), Gaps = 9/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V++A +AD ++ +V+ + + DE + + K+P+LL+LNK D
Sbjct: 68 YELQSSMMDFVKTAFEDADILIYMVEIGEKALK-DEAFFNKLKN--SKIPVLLLLNKIDA 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ ++++++++ E+ P+SA V+++ I+ LPL PAYYPKD +++ P
Sbjct: 125 SEQEKLEEQVQYWQEQLPTAEIHPISALMNFNVKEVFLRIIELLPLSPAYYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI Y+ EVPYA +++ + +D I++ I+VE++SQK I+I
Sbjct: 185 ERFFVNETIREKILQFYKKEVPYAVEIDTEEF---FEDEDIIRMRAVIMVERDSQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G ALK + AR D+E F K+V+LE+ VKV +NWR + LK +GY
Sbjct: 242 GHKGSALKRVGVEARKDLEKFFDKQVHLELYVKVNKNWRSNANQLKRFGYN 292
>gi|421894234|ref|ZP_16324724.1| GTP-binding protein Era [Pediococcus pentosaceus IE-3]
gi|385272778|emb|CCG90096.1| GTP-binding protein Era [Pediococcus pentosaceus IE-3]
Length = 304
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 187/301 (62%), Gaps = 2/301 (0%)
Query: 102 IEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 161
+EE + A H +++G+PNVGKST N +IGQK++I++N PQTTR++I GI + Q+
Sbjct: 1 MEENNQAFHSGFVAIVGRPNVGKSTFLNYVIGQKVAIMSNVPQTTRNKIQGIYTTDREQI 60
Query: 162 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 221
+ DTPGI K + L M+++ S+ D I+ +V+A + D + E + D
Sbjct: 61 VFIDTPGI-HKSHNKLGDFMVQSAMSSLNEVDAIMFMVNADEPRGAGDNYIIERLKKITD 119
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
+ P+ LV+NK DL+ P E+ ++ Y+ D EV P+SA G+ + ++ + +P G
Sbjct: 120 R-PVYLVINKIDLVHPDELLPIVDSYKDAMDWTEVFPISALQGNNINELVTTLSQHMPEG 178
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 341
P YYP D V++HPERF V E+IREK+ R EVP++ V + + K+ IQ I+
Sbjct: 179 PKYYPDDQVTDHPERFVVSELIREKVLQLTRQEVPHSVAVVIETMKSNDEGLVNIQATII 238
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
V+++SQK I+IGKGGK LK + + ARLDIE L +VYLE+ VKV E WR +G+L+ +G
Sbjct: 239 VDRSSQKGIVIGKGGKMLKEIGSRARLDIEHLLGSRVYLELWVKVSEGWRDKQGILQSFG 298
Query: 402 Y 402
Y
Sbjct: 299 Y 299
>gi|404497170|ref|YP_006721276.1| GTPase Era [Geobacter metallireducens GS-15]
gi|418066668|ref|ZP_12704028.1| GTP-binding protein Era [Geobacter metallireducens RCH3]
gi|123571481|sp|Q39T84.1|ERA_GEOMG RecName: Full=GTPase Era
gi|78194773|gb|ABB32540.1| GTP-binding protein Era [Geobacter metallireducens GS-15]
gi|373560161|gb|EHP86433.1| GTP-binding protein Era [Geobacter metallireducens RCH3]
Length = 298
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 186/290 (64%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+K+ I ++KPQTTR+RI GI + P Q++ DTPGI + +
Sbjct: 12 SIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNVPGAQIVFIDTPGIHQAR- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAP-ERIDEILEEGVGDHKDKLPILLVLNKKD 233
L+ M++ SA D ++ LV+A + P E+ EI++ G P+ LV+NK D
Sbjct: 71 SRLNKYMVEVALSAIREVDLVLFLVEANQKPGEQEQEIIDVLAGATA---PVFLVINKVD 127
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
L + G + +++ Y+ E++P+SA G GV+ + + + LP GP Y+P DI+++
Sbjct: 128 LTEKGAVLERIAAYKDRYPFREIVPISAGTGDGVDHLVELVRKALPQGPVYFPDDILTDV 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
PERF EIIREK+F R+EVPYA V V S+K R I I VE++SQK I+I
Sbjct: 188 PERFIAAEIIREKVFRMTRDEVPYATAVEVDSFKEREDGGLVSIAATITVERDSQKGIII 247
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + +AAR++IE L KV+LE+ V+V+++W +DE +LK GY
Sbjct: 248 GKKGAMLKKIGSAARVEIEKLLNTKVFLELFVRVRKDWSEDERMLKELGY 297
>gi|386813446|ref|ZP_10100670.1| GTP-binding protein Era [planctomycete KSU-1]
gi|386402943|dbj|GAB63551.1| GTP-binding protein Era [planctomycete KSU-1]
Length = 299
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 189/291 (64%), Gaps = 5/291 (1%)
Query: 113 HKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEK 172
+ +++GKPNVGKSTL N ++G KLSIVT KPQTTR +I+G+ + +YQ+I YDTPGIIE
Sbjct: 12 YVAIIGKPNVGKSTLINDLLGCKLSIVTPKPQTTRKKIMGVLTKEDYQIIFYDTPGIIEP 71
Query: 173 KIHMLDSMMMKNVRSAGINADCIVVLVDACK-APERIDEILEEGVGDHKDKLPILLVLNK 231
+ + L + M+K S + D I+++V+ CK + ++ E+L++ + P++L +NK
Sbjct: 72 R-YELQTYMVKTAYSVIEDVDVILLMVEPCKPSTDKDREVLKKL---SQVNAPVILAVNK 127
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
DL++ + + Y+ E++P+SA G ++ + I+ LP G +YP+D ++
Sbjct: 128 VDLVEKDSLIPIISAYDAQLKFAEIVPISALKGVNIDLMLSLIVKYLPEGEPFYPEDYMT 187
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
++ ERF EI+REKIF Y E+PY+ V + +K R KDFI+ I VE+NSQK I+
Sbjct: 188 DYNERFLASEIVREKIFEFYGEEIPYSTTVEIEEFKEREAGKDFIRAIIYVERNSQKGII 247
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IG+ GKA+K + AR +IE + +KVYLE++VKV E WR+D+ L+ GY
Sbjct: 248 IGENGKAIKHVGVIAREEIEKQIGRKVYLELQVKVMEKWRKDKSKLQKLGY 298
>gi|404417997|ref|ZP_10999779.1| GTPase Era [Staphylococcus arlettae CVD059]
gi|403489713|gb|EJY95276.1| GTPase Era [Staphylococcus arlettae CVD059]
Length = 298
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 9 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTEDDAQIIFLDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + K P+ LVLNK DL
Sbjct: 68 HKLGDYMMRVAKNTLSEIDAIMFMVNINEDIGRGDEFIMEML--KTIKTPVFLVLNKIDL 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++E Y+K+ D E++P+SA GH V+ + + LP GP YYP D +S+HP
Sbjct: 126 VHPDELMPRIEQYQKYMDFTEIVPISALEGHNVDHFLSVLKSYLPEGPKYYPDDQISDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGE+IREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 186 EQFVVGELIREKILHLTSEEIPHAIGVNVDRMVKEDEDRVRIEATIFVERDSQKGIVIGK 245
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 246 GGKKLKEVGKRARKDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQMGY 293
>gi|298206898|ref|YP_003715077.1| GTP-binding protein [Croceibacter atlanticus HTCC2559]
gi|83849532|gb|EAP87400.1| putative GTP-binding protein [Croceibacter atlanticus HTCC2559]
Length = 294
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 189/288 (65%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q++L DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQIVLSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+SA +AD ++ +V+ + + DE + + + + +P+LL+LNK D
Sbjct: 68 YQLQENMMDFVKSAFEDADVLIYMVEIGEQSLK-DEAFFKKITNAE--IPVLLLLNKIDT 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++++++++ E+ P+SA G V ++ + I+ +P PA+YPKD +++ P
Sbjct: 125 SDQHQLEEQMQYWKEKVPTAEIYPISALEGFNVSEVLNRIIEVMPESPAFYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV EIIREKI M Y+ E+PY+ +V+ + + I+VE++SQK I+IG
Sbjct: 185 ERFFVNEIIREKILMHYKKEIPYSVEVDTEEFFEEEEIIKMRSI-IMVERDSQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK + AR D+E F K+V++E+ VKV +NWR ++ L+ +GY
Sbjct: 244 KGSALKRVGVEARKDLEKFFGKQVHIELYVKVNKNWRSNDNQLRRFGY 291
>gi|294501286|ref|YP_003564986.1| GTP-binding protein Era [Bacillus megaterium QM B1551]
gi|295706633|ref|YP_003599708.1| GTP-binding protein Era [Bacillus megaterium DSM 319]
gi|384044868|ref|YP_005492885.1| GTP-binding protein era-like protein [Bacillus megaterium WSH-002]
gi|294351223|gb|ADE71552.1| GTP-binding protein Era [Bacillus megaterium QM B1551]
gi|294804292|gb|ADF41358.1| GTP-binding protein Era [Bacillus megaterium DSM 319]
gi|345442559|gb|AEN87576.1| GTP-binding protein era-like protein [Bacillus megaterium WSH-002]
Length = 301
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 182/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTEDQAQIVFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + R DE + E + D K P+ LV+NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINATEGLGRGDEFIIERLKD--TKTPVFLVINKIDE 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ + Y+ E++P+SA G+ VE + D I +LP GP YYP D V++HP
Sbjct: 129 IHPDELFSIITNYKDLYPFAEIVPISALQGNNVERLLDQIKQRLPEGPQYYPADQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S + R ++ I+VE++SQK I+IGK
Sbjct: 189 ERFIITELIREKVLHATREEIPHSIAVVMDSMQRRDNGAVYVGATIIVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ +G+
Sbjct: 249 QGKMLKEVGRKARADIEALLGSKVFLELWVKVQKDWRNRASHLRDFGF 296
>gi|386820944|ref|ZP_10108160.1| GTP-binding protein Era [Joostella marina DSM 19592]
gi|386426050|gb|EIJ39880.1| GTP-binding protein Era [Joostella marina DSM 19592]
Length = 295
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 187/300 (62%), Gaps = 17/300 (5%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
NHK+ ++G PNVGKSTL N IG+KLSI+T+K QTTRHRI GI +G ++Q++ DTP
Sbjct: 3 NHKAGFVNIIGNPNVGKSTLMNAFIGEKLSIITSKAQTTRHRIFGIVNGDDFQIVFSDTP 62
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKLPI 225
GII K + L MM V+SA +AD ++ +V+ + E+ +E D KLP+
Sbjct: 63 GII-KPAYELQQSMMDFVKSAFEDADVLIYMVEIGEK-----ELKDEAFFDKITASKLPV 116
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LL+LNK D+ + +++W+ + E+ P+SA ++ + + IL LP P +Y
Sbjct: 117 LLLLNKIDISSQEVLEDQVQWWSEKVPNAEIYPISALTNFNIDTVFNRILELLPASPPFY 176
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVE 343
PKD +++ PERFFV E +REKI + Y+ E+PYA +V + +D I++ I+VE
Sbjct: 177 PKDQITDKPERFFVNETVREKILINYKKEIPYAVEVETEEF---IEDEDIIRIRSVIMVE 233
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+++QK I+IG G ALK + +R D+E F K+V++EI VKV +NWR ++ LK +GY
Sbjct: 234 RDTQKGIIIGHKGAALKRVGVQSRKDLEKFFGKQVHIEIYVKVNKNWRSNQNQLKRFGYN 293
>gi|393201605|ref|YP_006463447.1| GTPase [Solibacillus silvestris StLB046]
gi|406664463|ref|ZP_11072238.1| Bex protein [Bacillus isronensis B3W22]
gi|327440936|dbj|BAK17301.1| GTPase [Solibacillus silvestris StLB046]
gi|405387311|gb|EKB46735.1| Bex protein [Bacillus isronensis B3W22]
Length = 304
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 187/290 (64%), Gaps = 5/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 13 SIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTQQNSQTIFIDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K R+A D I+ +V+A +A + DE + E + +K P+ L++NK DL
Sbjct: 72 HKLGEFMLKTSRNALREVDVIMFMVNAEQAIGKGDEFIIELL--QGNKTPVFLIINKIDL 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K ++ Y+ D E+IP+SA G+ VE++ I LP GP YYP D V++HP
Sbjct: 130 VHPDELVKIIDSYKDKFDFAEIIPISALQGNNVENLLSTIEKYLPEGPQYYPADQVTDHP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERF + E+IREK+ R E+P++ V + K ++ I V+ I+VE++SQK I+I
Sbjct: 190 ERFIISELIREKVLHLTREEIPHSIAVVIERIKPHEEKENMIHVQATIMVERDSQKGIVI 249
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + + AR DIE L KVYLE+ VKV+++WR + L+ +G+
Sbjct: 250 GKRGALLKEVGSRARQDIEMLLGSKVYLELWVKVQKDWRNKQTHLRDFGF 299
>gi|319952376|ref|YP_004163643.1| gtp-binding protein era-like-protein [Cellulophaga algicola DSM
14237]
gi|319421036|gb|ADV48145.1| GTP-binding protein Era-like-protein [Cellulophaga algicola DSM
14237]
Length = 295
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 184/289 (63%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QMIL DTPGII K
Sbjct: 10 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQMILSDTPGII-KPA 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + + + E+ K+P+LL+LNK D+
Sbjct: 69 YELQSSMMDFVKSAFEDADILIYMVEIGEKALKDERFFEKL---KNSKIPVLLLLNKIDV 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ G + +++++ + E+ P+SA V+++ IL LP+ PA+YPKD +++ P
Sbjct: 126 SEQGILEAQVQYWHEQLPTAEIHPISALQNFNVKEVFLRILELLPVSPAFYPKDQLTDKP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI Y+ E+PY+ +++ + V I+VE+ SQK I+IG
Sbjct: 186 ERFFVNETIREKILQNYKKEIPYSVEIDTEEFFEDDKIIRMRSV-IMVERESQKGIIIGH 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + +R D+E F K+V+LE+ VKV +NWR + LK +GY
Sbjct: 245 KGAALKRVGVESRKDLEIFFDKQVHLELYVKVNKNWRSNANQLKRFGYN 293
>gi|193213835|ref|YP_001995034.1| GTP-binding protein Era [Chloroherpeton thalassium ATCC 35110]
gi|193087312|gb|ACF12587.1| GTP-binding protein Era [Chloroherpeton thalassium ATCC 35110]
Length = 321
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/300 (43%), Positives = 186/300 (62%), Gaps = 19/300 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PN GKSTL N ++G+K+SIVT KPQTTR R+LGI + Q++L DTPGI++ K
Sbjct: 28 TILGEPNAGKSTLLNVLLGEKISIVTPKPQTTRKRVLGIFTDKSCQIVLLDTPGIMKPKY 87
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDA-----CKAPERIDEILEEGVGDHKDKLPILLVL 229
+ ++M+ +S ++D +V+L+D KA + D + K P++LVL
Sbjct: 88 KLHEAMLDLADKSVE-DSDVLVLLLDVEKYQKGKAELKADLAFQRIANTKK---PVILVL 143
Query: 230 NKKDLIKPGEIAKKLEWYEKFTD---VDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
NK DLI LE KF+ E++P+SA G+ + + ++ LP P YP
Sbjct: 144 NKVDLITKDA---SLELIAKFSSEYPFREIVPLSALKGYNIREFLKAVVPYLPASPPLYP 200
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV----SYKTRPTAKDFIQVEIVV 342
DI+S PERFFV EIIREKIF + E+PY+ +V+V +Y+ P KD ++ IVV
Sbjct: 201 PDILSTAPERFFVSEIIREKIFQFFSQEIPYSTEVDVEEFQENYEKNPARKDVLRCAIVV 260
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ SQK ILIGK GKA+K + AAR DIE FL + V+LE+ VKVKE WR+ E L+ +GY
Sbjct: 261 DRLSQKSILIGKDGKAIKRVGQAARKDIEAFLGRPVFLELFVKVKEGWREKESSLRDFGY 320
>gi|374596875|ref|ZP_09669879.1| GTP-binding protein Era-like-protein [Gillisia limnaea DSM 15749]
gi|373871514|gb|EHQ03512.1| GTP-binding protein Era-like-protein [Gillisia limnaea DSM 15749]
Length = 293
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 186/290 (64%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQVILSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+SA +AD ++ +V+ + + + + V ++P+LL+LNK D+
Sbjct: 68 YDLQQSMMDFVKSAFEDADILIYMVEIGEQALKDEAFFNKIVNS---QIPVLLLLNKIDI 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ ++++ W EK + E+ P+SA G V ++ + I+ LP PA+YPKD +++
Sbjct: 125 SNQEQLEEQVQLWTEKVPNA-EIYPISALQGFNVSEVFNRIVELLPESPAFYPKDQLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV EIIREKI M Y+ E+PY+ +++ + + I+VE+ +QK I+IG
Sbjct: 184 PERFFVNEIIREKILMHYKKEIPYSVEIDTEEFFEEEEIIRMRSI-IMVERETQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR D+E F K+V+LE+ VKV +NWR D LK +GY
Sbjct: 243 HKGAALKRVGVEARKDLEKFFGKQVHLELYVKVNKNWRNDARQLKRFGYN 292
>gi|322420694|ref|YP_004199917.1| GTP-binding protein Era [Geobacter sp. M18]
gi|320127081|gb|ADW14641.1| GTP-binding protein Era [Geobacter sp. M18]
Length = 297
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/288 (44%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+KL I ++KPQTTR++I GI + P Q++ DTPGI K
Sbjct: 12 SIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNQIKGIHNVPGGQIVFLDTPGIHRAKT 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L+ M++ S+ D I+ LVD PE+ E+++E V D P++LVLNK DL
Sbjct: 72 R-LNKFMVEEALSSVQGVDLILFLVDGAFDPEKEAEMIKE-VLSGVDA-PVILVLNKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I GE+ ++ Y + E+IPVSA G GV+ + + LP GP Y+P DI+++ P
Sbjct: 129 IPKGELLGRMAIYGETYPFKEIIPVSASTGDGVDQLVQLVHGLLPEGPCYFPDDILTDVP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EIIREKIF +EVPY+ V V S+K R IQ I VE++SQK I+IG+
Sbjct: 189 ERFIVAEIIREKIFRLTHDEVPYSVAVVVDSFKERENGVVAIQATINVERDSQKGIIIGR 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + T AR +IE L KV+LE+ V+V W + +LK +GY
Sbjct: 249 RGDMLKKIGTQARQEIEQLLDTKVFLELFVRVSGEWSDNSRMLKEFGY 296
>gi|418567001|ref|ZP_13131366.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21272]
gi|371982705|gb|EHO99853.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21272]
Length = 299
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMIVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|149277443|ref|ZP_01883584.1| GTP-binding protein [Pedobacter sp. BAL39]
gi|149231676|gb|EDM37054.1| GTP-binding protein [Pedobacter sp. BAL39]
Length = 292
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 188/288 (65%), Gaps = 6/288 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPNVGKSTL N +IG+KLSI+T K QTTRHRILGI + EYQ++ DTPGII+ K
Sbjct: 9 SIIGKPNVGKSTLMNALIGEKLSIITPKAQTTRHRILGIVNEEEYQIVFSDTPGIIKPKY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ DSMM +V+ A +AD I+ + D + + +++LE+ + +P+++++NK D
Sbjct: 69 GLQDSMMT-SVKGALTDADLILFVTDINEQHDE-NDVLEKIID---TTIPMIVLINKIDN 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +K ++++ + + +SA + + +E I D +L LP PAYY K+ +++
Sbjct: 124 ATQEQVEEKSAFWQEKLNPKYIFAISALHQYNLEGIMDRVLDFLPEHPAYYDKEDLTDRN 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+RFFV EIIREKIF Y+ E+PY+ +V + ++K I EI+VE++SQK ILIGK
Sbjct: 184 QRFFVSEIIREKIFNNYQKEIPYSTEVVITAFKEEEKLVR-ISAEIIVERDSQKNILIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + AR DIE FL +KV+LE VKV +WR + LK +GY
Sbjct: 243 GGSMLKKVGMEARKDIEKFLDQKVFLETFVKVLPDWRSKKNYLKSFGY 290
>gi|116492866|ref|YP_804601.1| GTPase [Pediococcus pentosaceus ATCC 25745]
gi|122265670|sp|Q03F63.1|ERA_PEDPA RecName: Full=GTPase Era
gi|116103016|gb|ABJ68159.1| GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 304
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 187/301 (62%), Gaps = 2/301 (0%)
Query: 102 IEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 161
+EE + A H +++G+PNVGKST N +IGQK++I++N PQTTR++I GI + Q+
Sbjct: 1 MEENNQAFHSGFVAIVGRPNVGKSTFLNYVIGQKVAIMSNVPQTTRNKIQGIYTTDREQI 60
Query: 162 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 221
+ DTPGI K + L M+++ S+ D I+ +V+A + D + E + D
Sbjct: 61 VFIDTPGI-HKSHNKLGDFMVQSAMSSLNEVDAIMFMVNADEPRGAGDNYIIERLKKITD 119
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
+ P+ LV+NK DL+ P E+ ++ Y+ D EV P+SA G+ + ++ + +P G
Sbjct: 120 R-PVYLVINKIDLVHPDELLPIVDSYKDAMDWTEVFPISALQGNNINELVTTLSQHMPEG 178
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 341
P YYP D V++HPERF V E+IREK+ R EVP++ V + + K+ IQ I+
Sbjct: 179 PKYYPDDQVTDHPERFVVSELIREKVLQLTRQEVPHSVAVVIETMKSNDEGLVNIQATII 238
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
V+++SQK I+IGKGGK LK + + AR+DIE L +VYLE+ VKV E WR +G+L+ +G
Sbjct: 239 VDRSSQKGIVIGKGGKMLKEIGSRARVDIEHLLGSRVYLELWVKVSEGWRDKQGILQSFG 298
Query: 402 Y 402
Y
Sbjct: 299 Y 299
>gi|284024626|ref|ZP_06379024.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 132]
Length = 299
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+ NVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRSNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|95930678|ref|ZP_01313412.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684]
gi|95133330|gb|EAT14995.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684]
Length = 303
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 181/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL NQ++GQK++I NKPQTTR+RILGI S Q++ DTPGI K
Sbjct: 17 SIVGRPNVGKSTLLNQILGQKIAITANKPQTTRNRILGIHSEDNAQVLFLDTPGI-HKAT 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L+ M+ SA D +V LV+A D+ + + + + +P++LV+NK DL
Sbjct: 76 GKLNQYMVDQALSACRGVDVVVFLVEATDRVGGGDDFILDVLA--QSDIPVVLVINKVDL 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++ + Y + D E+IP+SA G GVE + + LP GP YYP+++V++ P
Sbjct: 134 VEKDKLLPLIAQYAERFDFKEIIPLSALNGSGVERLVASVRDMLPEGPPYYPEEMVTDLP 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEIVVEKNSQKIILI 352
ERF VGE+IREKI + EVPY V V +++ RP K+ IQ I V +++ K IL+
Sbjct: 194 ERFIVGEMIREKILRKTHQEVPYGVAVQVDNFEERP-GKNLIAIQATIYVGRDAHKRILV 252
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG +K L AR +IE FL +V+LE+ VKVK+NW E L+ +GY
Sbjct: 253 GKGGSMIKQLGQDARKEIEQFLDARVFLELFVKVKKNWMDSERFLREFGY 302
>gi|340354656|ref|ZP_08677358.1| GTP-binding protein Era [Sporosarcina newyorkensis 2681]
gi|339623179|gb|EGQ27684.1| GTP-binding protein Era [Sporosarcina newyorkensis 2681]
Length = 304
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N+M+GQK++I+++KPQTTR+++ GI + QMI DTPG+ + K
Sbjct: 14 SIIGRPNVGKSTFINRMVGQKIAIMSDKPQTTRNKVQGIVTSDTSQMIFIDTPGVHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K RS D I+ +V+A + D + E + K + P+ LV+NK DL
Sbjct: 73 HRLGDFMLKVTRSTLSEVDVIMFMVNADEKIGTGDRFIMEWL--EKSETPVFLVINKIDL 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + + Y EV+P+SA G+ +E + + + + LP GP YY D V++HP
Sbjct: 131 VHPDQLLEIITTYTDELKFAEVVPISALNGNNIERLVETLESYLPEGPQYYAADQVTDHP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IREK+ R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 191 ERFIISEMIREKVLHTTREEIPHSIAVAIESIEQDTSTGKTHIRATIIVERDSQKGIVIG 250
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGGK LK + T AR DIE L +KV+LE+ VKV+++WR LK +G+
Sbjct: 251 KGGKLLKEIGTKARKDIEMLLGEKVFLELWVKVQKDWRNRPSRLKEFGF 299
>gi|404485334|ref|ZP_11020532.1| GTP-binding protein Era [Barnesiella intestinihominis YIT 11860]
gi|404338769|gb|EJZ65214.1| GTP-binding protein Era [Barnesiella intestinihominis YIT 11860]
Length = 294
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 189/289 (65%), Gaps = 6/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG++
Sbjct: 8 NIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTEDMQIVYSDTPGVLVPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + +SA ++AD ++ + D +AP + L++ ++ +P+L+V+NK DL
Sbjct: 68 KLQESMLNFS-QSALLDADILLYVTDVVEAPAKNQSFLDKVA---RETVPVLVVINKIDL 123
Query: 235 IKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K ++ K +E +++ E+IPVSA+Y ++ + I LP P ++ KD +++
Sbjct: 124 LKEQSDLEKLVEEWKQLLPNAEIIPVSAQYKFNLDYLLKRIQELLPPSPPFFEKDALTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
P RFFV EIIREKI Y E+PYAC+V V + D + V I VE++SQK I+IG
Sbjct: 184 PARFFVTEIIREKILQTYDKEIPYACEVAVEQFHEEENHIDIMAV-IYVERDSQKGIVIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG ALK + T AR DIE F KKV+LE+ VKV+++WR E LK +GY
Sbjct: 243 KGGSALKKVGTLARKDIEVFFDKKVFLELYVKVEKDWRSRENKLKGFGY 291
>gi|414160933|ref|ZP_11417196.1| GTPase Era [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876612|gb|EKS24510.1| GTPase Era [Staphylococcus simulans ACS-120-V-Sch1]
Length = 299
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 183/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N+++G K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFMNRVLGHKIAIMSDKAQTTRNKIQGVMTEDDAQIIFVDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +V+A + R DE + E + + K P+ LV+NK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEVDAVIFMVNADEKIGRGDEYIMEMLKNVK--TPVFLVINKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P EI +E Y+K+ D E +P+SA G VE + + + LP GP YYP +S+HP
Sbjct: 127 VHPDEIMPIIESYQKYMDFSETVPMSALEGLNVEHFIEVLKSYLPEGPQYYPDGQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGE+IREKI E+P++ +VNV + K I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGELIREKILHLTSEEIPHSIEVNVDRMVKQSEDKVRIEATIFVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + ARLDIE+ L KVYL++ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEIGKRARLDIENLLGSKVYLDLWVKVQKDWRNKINFIRQMGY 294
>gi|344202151|ref|YP_004787294.1| GTP-binding protein Era-like-protein [Muricauda ruestringensis DSM
13258]
gi|343954073|gb|AEM69872.1| GTP-binding protein Era-like-protein [Muricauda ruestringensis DSM
13258]
Length = 293
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 189/292 (64%), Gaps = 9/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QMIL DTPGII K +
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQMILSDTPGII-KPV 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + + DE + + K+P+LL+LNK D
Sbjct: 68 YELQSSMMDFVKSAFEDADVLLYMVEIGEKALK-DESFFKKI--QNSKIPVLLLLNKIDT 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++++++++ E+ P+SA V ++ + IL LP P +YPKD +++ P
Sbjct: 125 SDQQILEEQMQYWQEQLPNAEIHPISALENFNVTEVFNRILELLPEAPPFYPKDQITDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI + Y+ E+PY+ +V + +D I++ I+VE+++QK I+I
Sbjct: 185 ERFFVNETIREKILLHYKKEIPYSVEVETEEFL---EDEDIIRIRSVIMVERDTQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
G G A+K + AR D+E F K+V++E+ VKV +NWR + L+ +GY G
Sbjct: 242 GHKGSAIKKVGVEARKDLEKFFAKQVHIELYVKVNKNWRSNSQQLRRFGYNG 293
>gi|354582242|ref|ZP_09001144.1| GTP-binding protein Era [Paenibacillus lactis 154]
gi|353199641|gb|EHB65103.1| GTP-binding protein Era [Paenibacillus lactis 154]
Length = 300
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + P+ Q++ DTPGI +++
Sbjct: 12 AIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTPDSQVVFLDTPGIHKRQS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M + + G + ++ LVDA + D + E + K K P++LV+NK D
Sbjct: 72 KLGDYMNQTALGTLG-EVEAVLFLVDASEGIGGGDRFIAEQLS--KIKTPVMLVMNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+P + +E Y K D E++P+SAK G V+ + D I LP GP YYP+D V++HP
Sbjct: 129 IEPPALLPLIEEYRKLHDFAEIVPISAKLGSNVDTLLDQIQKYLPPGPQYYPEDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI R EVP++ V + + +I I VE++SQK I+IGK
Sbjct: 189 EQFVCAELIREKILHMTREEVPHSIAVTIEDMRKEENGTVYISAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DI+ L K++LE+ VKVK++WR E +L+ G+
Sbjct: 249 QGALLKEVGKQARQDIQRLLGSKIFLELWVKVKKDWRNQERVLRDLGF 296
>gi|387792311|ref|YP_006257376.1| GTP-binding protein Era [Solitalea canadensis DSM 3403]
gi|379655144|gb|AFD08200.1| GTP-binding protein Era [Solitalea canadensis DSM 3403]
Length = 292
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 186/288 (64%), Gaps = 6/288 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPN GKSTL N ++G+++SI+T+K QTTRHRI+GI + + Q+I DTPG+I+ K
Sbjct: 9 SIVGKPNAGKSTLMNILVGERMSIITHKAQTTRHRIIGIINDEDTQIIFSDTPGMIQPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V + ++AD ++V+ D + + D I E V ++ P+ +++NK D
Sbjct: 68 YGLQKSMMSAVNESFLDADVLLVVTDINEKHDEADLI--EKVKKYEG--PVAVLINKVDQ 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ K E+++K + +IP+SA ++ I +I LP+ P YY K+ +++
Sbjct: 124 SNQELVTAKFEYWQKELNPAAIIPISALKEFNIDAITSFIRANLPVHPPYYDKEELTDRS 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV EIIRE+IF EVPY+ +V +VS+K D I EI+VE+ +QK I+IGK
Sbjct: 184 ERFFVSEIIREQIFKCCEKEVPYSSEVVIVSFKEGEDI-DRISAEIIVERETQKAIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK +A+AAR DIE FLQKKV+LE+ VKV ++WR + LK +GY
Sbjct: 243 GGLMLKKIASAARYDIELFLQKKVFLEVFVKVLDDWRNKDNYLKRFGY 290
>gi|315303200|ref|ZP_07873857.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596]
gi|347548848|ref|YP_004855176.1| putative GTP binding protein [Listeria ivanovii subsp. ivanovii PAM
55]
gi|313628427|gb|EFR96903.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596]
gi|346981919|emb|CBW85900.1| Putative GTP binding protein [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 301
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ K +E Y + D +E+IP+SA G+ V ++ D L +GP YYPKD +++HP
Sbjct: 128 ISPEELFKLIEQYRELLDFEEIIPISALQGNNVPNLLDQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L YG+
Sbjct: 248 KQGQMLKQIGMRARKEIESLLGSKVFLEIWVKVQKNWRDKEHYLHDYGF 296
>gi|354605310|ref|ZP_09023299.1| GTP-binding protein Era [Alistipes indistinctus YIT 12060]
gi|353347889|gb|EHB92165.1| GTP-binding protein Era [Alistipes indistinctus YIT 12060]
Length = 292
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 185/299 (61%), Gaps = 19/299 (6%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q++ DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDFQIVYSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHKDKLP 224
I++ + +SMM K V+ A +AD I+ + D + E +D+IL G+
Sbjct: 62 ILKPNYKLHESMM-KVVQGALKDADIILYVTDVTEGTEHRNEFVDKILRSGI-------K 113
Query: 225 ILLVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 283
+LV+NK DL P ++ + + EW D ++PVSA + + + D IL LP G
Sbjct: 114 TILVINKIDLTTPDKLEQLVDEWRHILPDA-LIVPVSAAHNFNIGGLFDRILELLPEGEP 172
Query: 284 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 343
+YPKD +++ RFF EIIREKI + Y E+PY+ ++++ YK PT D I I V
Sbjct: 173 FYPKDALTDKSLRFFASEIIREKILLNYEKEIPYSVEISIEEYKEEPTI-DRISAVIYVA 231
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++SQK ILIG G LK + + AR D+E FL KKV+L++ VKV E+WR + LK +GY
Sbjct: 232 RDSQKGILIGHQGSRLKKVGSEARADLEQFLGKKVFLQLFVKVNEDWRNSDRQLKRFGY 290
>gi|187934969|ref|YP_001885107.1| GTP-binding protein Era [Clostridium botulinum B str. Eklund 17B]
gi|226741198|sp|B2TMB9.1|ERA_CLOBB RecName: Full=GTPase Era
gi|187723122|gb|ACD24343.1| GTP-binding protein Era [Clostridium botulinum B str. Eklund 17B]
Length = 295
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 184/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGEDYQIVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVLNK D
Sbjct: 67 HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK--CPVYLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P +AK LE Y + E++P++A G V+ + D + T+LP GP YYP+D++++ P
Sbjct: 125 STPERVAKSLEMYSSEFNFKEIVPIAAIKGKNVDTLVDLMKTELPEGPKYYPEDMITDVP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK R+EVP+ V+++ K I+V+++ EK+S K I+IGK
Sbjct: 185 ERFVVSEIVREKALRCLRDEVPHGIAVDIIQMKQSDNGTYHIEVDLICEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + +R ++E FL+ KV ++I VKV++ WR ++ LLK GY
Sbjct: 245 NGQMLKKIGETSRYELERFLRTKVNVKIWVKVRKEWRDNQNLLKELGY 292
>gi|188590271|ref|YP_001920268.1| GTP-binding protein Era [Clostridium botulinum E3 str. Alaska E43]
gi|251778596|ref|ZP_04821516.1| GTP-binding protein Era [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|226741197|sp|B2V2K0.1|ERA_CLOBA RecName: Full=GTPase Era
gi|188500552|gb|ACD53688.1| GTP-binding protein Era [Clostridium botulinum E3 str. Alaska E43]
gi|243082911|gb|EES48801.1| GTP-binding protein Era [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 295
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 184/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQIVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVLNK D
Sbjct: 67 HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK--CPVYLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P +AK LE Y + E++P++A G V+ + D + T+LP GP YYP+D++++ P
Sbjct: 125 STPERVAKSLEMYSSEFNFKEIVPIAAIKGKNVDTLVDLMKTELPEGPKYYPEDMITDVP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK R+EVP+ V+++ K I+V+++ EK+S K I+IGK
Sbjct: 185 ERFVVSEIVREKALRCLRDEVPHGIAVDIIQMKQSDNGTYHIEVDLICEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + +R ++E FL+ KV ++I VKV++ WR ++ LLK GY
Sbjct: 245 NGQMLKKIGETSRYELERFLRTKVNVKIWVKVRKEWRDNQNLLKELGY 292
>gi|146299638|ref|YP_001194229.1| GTP-binding protein Era [Flavobacterium johnsoniae UW101]
gi|146154056|gb|ABQ04910.1| GTP-binding protein Era [Flavobacterium johnsoniae UW101]
Length = 295
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 187/296 (63%), Gaps = 19/296 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++L DTPGII+
Sbjct: 11 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQIVLSDTPGIIKPAY 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK-------DKLPILL 227
M +SMM V+SA +AD +V +V EI E+ + D K+P+LL
Sbjct: 71 EMQESMM-NFVKSAFEDADILVYMV----------EIGEQNLKDEDFFKKIFYAKIPVLL 119
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+LNK D ++ +++ ++++ E+ P+SA V ++ + I+ LP PAYYPK
Sbjct: 120 LLNKIDNSNQEQLEEQVAFWKEKVPNAEIFPISALQNFNVPEVFERIIQLLPESPAYYPK 179
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++ PERFFV E IREKI + Y E+PYA ++ + T I+ I+VE+++Q
Sbjct: 180 DQLTDKPERFFVNETIREKILLNYAKEIPYAVEIVTEEFHETDTIIR-IRSVIMVERDTQ 238
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K I+IG G ALK + T AR+D+E F K++++E+ VKV +NWR + +LK +GY
Sbjct: 239 KGIIIGHKGAALKKVGTDARVDLEKFFGKQIHIELYVKVNKNWRSNANMLKRFGYN 294
>gi|319892624|ref|YP_004149499.1| GTP-binding protein Era [Staphylococcus pseudintermedius HKU10-03]
gi|386319167|ref|YP_006015330.1| GTP-binding protein Era [Staphylococcus pseudintermedius ED99]
gi|317162320|gb|ADV05863.1| GTP-binding protein Era [Staphylococcus pseudintermedius HKU10-03]
gi|323464338|gb|ADX76491.1| GTP-binding protein Era [Staphylococcus pseudintermedius ED99]
Length = 298
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q++ DTPGI + K
Sbjct: 10 TIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQQDAQIVFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +V+ + R DE + E + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVAKNTLSEIDAVMFMVNVNEEIGRGDEYIMEML--KTVKTPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++E Y+++ D E+IP+SA GH V+ + + + LP GP YYP +S+HP
Sbjct: 127 VHPDALMPRIEQYQRYMDFAEIIPISALEGHNVDHFINVLKSYLPEGPQYYPDGQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V E+IREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSELIREKILQTTSEEIPHAIGVNVERMTQESEDRVHIEAVIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + ARLDIE L KVYL++ VKV+++WR +K GY
Sbjct: 247 GGKKLKEVGKRARLDIEHLLGSKVYLDLWVKVQKDWRNKSSFIKQMGY 294
>gi|409123739|ref|ZP_11223134.1| GTPase Era [Gillisia sp. CBA3202]
Length = 294
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 183/290 (63%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q IL DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQAILSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+SA +AD ++ +V+ + E DE + + +P+LL+LNK D+
Sbjct: 68 YDLQQSMMDFVKSAFEDADILIYMVEIGEQ-ELKDEAFFRKITNAT--IPVLLLLNKIDI 124
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
G + +++ W EK + E+ P+SA G V + + ++ LP PA+YPKD +++
Sbjct: 125 SNQGVLEEQVAHWSEKVPNA-EIYPISALQGFNVAQVFNRVVELLPESPAFYPKDTLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV EIIREKI M Y+ E+PY+ +++ + + I+VE+ +QK I+IG
Sbjct: 184 PERFFVNEIIREKILMHYKKEIPYSVEIDTEEFFEDEEIIRMRSI-IMVERETQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR D+E F K+V+LE+ VKV +NWR D LK +GY
Sbjct: 243 HKGTALKRVGVEARKDLEKFFGKQVHLELYVKVNKNWRNDSKQLKRFGYN 292
>gi|431796196|ref|YP_007223100.1| GTP-binding protein Era [Echinicola vietnamensis DSM 17526]
gi|430786961|gb|AGA77090.1| GTP-binding protein Era [Echinicola vietnamensis DSM 17526]
Length = 296
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 188/288 (65%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N ++G++LSI+++K QTTRHRILG+ +G +YQ++ DTPG+++ K
Sbjct: 12 NIIGKPNVGKSTLMNVLVGERLSIISSKAQTTRHRILGLMNGDDYQIVFSDTPGMLKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V + +AD IV + D + I+E++E+ +H P+LLV+NK DL
Sbjct: 71 YELHKSMMSFVNLSLEDADVIVFVTDLYETDNEIEEVIEKI--NHAGA-PVLLVINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
K ++ + +++ + D VIPVSA +E I IL +LP+ P YY K+ +++ P
Sbjct: 128 SKENKLEEVTQYWTERIKADTVIPVSALENFNIERIMQEILDRLPVHPPYYDKEELTDRP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFF EIIREKIF Y+ E+PY+ +V + + T I+ I VE++SQK I+IG
Sbjct: 188 ERFFASEIIREKIFTNYKKEIPYSTEVAIDQF-TEDDKLIRIRAIIFVERSSQKGIIIGD 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKA+K + +R +E F K+VYLE VKV+++WR+++ L+ +GY
Sbjct: 247 KGKAIKHVGIQSREALEAFFGKQVYLETHVKVEDDWRKNKNKLRKFGY 294
>gi|254932647|ref|ZP_05266006.1| GTP-binding protein Era [Listeria monocytogenes HPB2262]
gi|405749806|ref|YP_006673272.1| GTP-binding protein [Listeria monocytogenes ATCC 19117]
gi|417317582|ref|ZP_12104196.1| GTPase Era [Listeria monocytogenes J1-220]
gi|424823223|ref|ZP_18248236.1| GTP-binding protein Era [Listeria monocytogenes str. Scott A]
gi|293584206|gb|EFF96238.1| GTP-binding protein Era [Listeria monocytogenes HPB2262]
gi|328474974|gb|EGF45768.1| GTPase Era [Listeria monocytogenes J1-220]
gi|332311903|gb|EGJ24998.1| GTP-binding protein Era [Listeria monocytogenes str. Scott A]
gi|404219006|emb|CBY70370.1| GTP-binding protein (Bex protein) [Listeria monocytogenes ATCC
19117]
Length = 301
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 128 IAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L+ YG+
Sbjct: 248 KQGQMLKQIGMGARKEIERLLGSKVFLEIWVKVQKNWRDKEHYLQDYGF 296
>gi|296133911|ref|YP_003641158.1| GTP-binding protein Era [Thermincola potens JR]
gi|296032489|gb|ADG83257.1| GTP-binding protein Era [Thermincola potens JR]
Length = 300
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 182/295 (61%), Gaps = 16/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+ +GQKL+I++ KPQTTR++I G+ +G YQ+I DTPGI + K
Sbjct: 11 ALIGRPNVGKSTLMNKFLGQKLAIMSEKPQTTRNKINGVLTGENYQVIFLDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILL 227
H L M++ +A D I+ LV+A + E G GD + K P++L
Sbjct: 70 HKLGEYMVQVAYNALKEVDLILFLVEATEQ--------EVGTGDRYILEQLQEIKTPVIL 121
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK DL++ I ++ Y EV+PVSA G ++ + D IL LP GP YYP
Sbjct: 122 VINKIDLVQKDAILPVIDAYTARKQFAEVVPVSAITGANLQALLDNILKYLPEGPKYYPD 181
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
DI+S+ PERF + E+IREK+ R+EVP++ V++ R +++ + VE+ SQ
Sbjct: 182 DIISDQPERFVMAELIREKVLELTRDEVPHSVAVDIEEVTARKNETVYVRAVVYVERESQ 241
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I++GKGG+ LK + AR DIE+ L KVYL++ VKVK++WR +L+ +GY
Sbjct: 242 KGIIVGKGGQMLKKVGAFARQDIENLLGSKVYLDLWVKVKKDWRNRANILQGFGY 296
>gi|407476673|ref|YP_006790550.1| GTPase Era [Exiguobacterium antarcticum B7]
gi|407060752|gb|AFS69942.1| GTPase Era [Exiguobacterium antarcticum B7]
Length = 302
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDLQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +++ + + DE + E + D PI+LV+NK DL
Sbjct: 71 HKLGDFMMKVATNALREVDAILFMINVTEPKGKGDEFIIEKLKDLD--TPIILVMNKVDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P +I +E Y+ D V+P+SA G+ VE + I LP GP YYP D +++HP
Sbjct: 129 IHPNDIPPIIESYQNELDFAAVVPISALQGNNVEPLLQEIAKILPEGPMYYPADQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
ERF + E+IREK+ + R+EVP++ V + KTR I I++E++SQK I+IG
Sbjct: 189 ERFIISEMIREKVLQKTRDEVPHSIAVAIDQIKTREDGNMVDIHATILIERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + + AR DIE L KVYL + VKV+++WR G L+ G+
Sbjct: 249 KRGALLKEIGSEARTDIEMLLGTKVYLNLWVKVQKDWRNKAGQLRELGF 297
>gi|85818038|gb|EAQ39206.1| GTP-binding protein Era [Dokdonia donghaensis MED134]
Length = 294
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 183/289 (63%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QMIL DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + + + + G K+P+LL++NK D
Sbjct: 68 YELQASMMDFVKSAFEDADVLLYIVELGEKELKDEAFFNKIRGA---KIPVLLLINKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ + L+ W EK + EV +SA GV + + I+ LP PA+YPKD +++
Sbjct: 125 GNEEMLGEALKLWSEKVPNA-EVFAISALENFGVPQVFNRIIELLPESPAFYPKDQLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV EIIREKI M Y+ E+PYA +++ + V I+VE++SQK I+IG
Sbjct: 184 PERFFVNEIIREKILMHYKKEIPYAVEIDTEDFFEEDEIIRMRSV-IMVERDSQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK + AR D+E F K+V+LE+ VKV +NWR E LK +GY
Sbjct: 243 HKGTALKRVGVEARKDLEKFFGKQVHLELYVKVNKNWRSSERQLKRFGY 291
>gi|384097871|ref|ZP_09998991.1| GTPase Era [Imtechella halotolerans K1]
gi|383836753|gb|EID76160.1| GTPase Era [Imtechella halotolerans K1]
Length = 293
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 188/289 (65%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPGII-KPA 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + E DE+ + + + K+P+LL+LNK D
Sbjct: 67 YELQSSMMDFVKSAFEDADVLLYMVEIGEK-ELKDELFFDKINN--SKVPVLLLLNKIDT 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++++++ + E+ P+SA V ++ + I+ LP PA+YPKD +++ P
Sbjct: 124 STQEQLEEQVQYWSEKAPRAEIFPISALQNFNVIEVFNRIIELLPESPAFYPKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI + Y+ E+PYA +V + V I+VE+++QK I+IG
Sbjct: 184 ERFFVNETIREKILLNYKKEIPYAVEVETEEFFEEDHIIRMRSV-IMVERDTQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ALK + AR D+E F K+++LE+ VKV +NWR + G LK +GY
Sbjct: 243 KGEALKRVGVQAREDLEKFFGKQIHLELYVKVNKNWRSNSGQLKRFGYN 291
>gi|340616983|ref|YP_004735436.1| GTP-binding protein Era [Zobellia galactanivorans]
gi|339731780|emb|CAZ95045.1| GTP-binding protein Era [Zobellia galactanivorans]
Length = 294
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 186/290 (64%), Gaps = 5/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPGII K
Sbjct: 10 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPGII-KPA 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + + DE + + + K+P+LL+LNK D
Sbjct: 69 YELQSSMMNFVKSAFEDADVLLYMVEIGEKALK-DEAFFDKIKN--SKIPVLLLLNKVDT 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++++++++ E+ P+SA +++I + I+ LP PAYYPKD +++ P
Sbjct: 126 ATQELLEEQVQYWQEMLPTVELHPISALSNFNIKNIFERIIELLPEAPAYYPKDQLTDKP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI M Y+ E+PY+ ++ + V I+VE++SQK I+IG
Sbjct: 186 ERFFVNETIREKILMHYKKEIPYSVEIETEEFFEDEDIIRMRSV-IMVERDSQKGIIIGH 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
G ALK + +R D+E F K+V+LE+ VKV +NWR D LK +GY
Sbjct: 245 KGSALKRVGVESRKDLEKFFGKQVHLELYVKVNKNWRNDARQLKRFGYNN 294
>gi|39997324|ref|NP_953275.1| GTPase Era [Geobacter sulfurreducens PCA]
gi|409912668|ref|YP_006891133.1| GTP-binding protein Era [Geobacter sulfurreducens KN400]
gi|39984215|gb|AAR35602.1| GTP-binding protein Era [Geobacter sulfurreducens PCA]
gi|298506261|gb|ADI84984.1| GTP-binding protein Era [Geobacter sulfurreducens KN400]
Length = 299
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 184/298 (61%), Gaps = 22/298 (7%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+K+ I ++KPQTTR+RI GI + P Q++ DTPGI +
Sbjct: 13 SIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIHHAR- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL---------PI 225
L+ M++ S+ D +++LV+A +AP GD + ++ P+
Sbjct: 72 SRLNKFMVEEALSSIREVDLVMLLVEANRAP-----------GDQEREIAGLLPSVNVPV 120
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK DLI P +A++L Y + EV+PVSA+ G VE + + + LP GP Y+
Sbjct: 121 FLVVNKIDLIDPDILAERLTAYAELFPFREVVPVSAETGENVERLVEVVRDTLPEGPVYF 180
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEK 344
P DI+++ PERF V EI+REK+F R+E+PY+ V V S++ R I I VE+
Sbjct: 181 PDDILTDLPERFIVAEIVREKVFRLTRDEIPYSTAVEVDSFREREDGGLVSISATITVER 240
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+SQK I+IG+ G LK + + ARL+IE L KV+LE+ V+V+ +W ++ +LK GY
Sbjct: 241 DSQKGIIIGRKGAMLKQIGSEARLEIERLLDTKVFLELFVRVRRDWSENPNILKELGY 298
>gi|332292384|ref|YP_004430993.1| GTP-binding protein Era [Krokinobacter sp. 4H-3-7-5]
gi|332170470|gb|AEE19725.1| GTP-binding protein Era [Krokinobacter sp. 4H-3-7-5]
Length = 294
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 184/289 (63%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QM+L DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMLLSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + + + + G K+P+LL++NK D
Sbjct: 68 YELQASMMDFVKSAFEDADVLLYIVELGEKELKDEAFFNKIRGS---KIPVLLLINKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+A+ L+ W EK + EV +SA GV + + I+ LP PA+YPKD +++
Sbjct: 125 GNEDTLAEALKLWSEKVPNA-EVFAISALESFGVPQVFNRIIELLPESPAFYPKDQLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV EIIREKI M Y+ E+PYA +++ + V I+VE++SQK I+IG
Sbjct: 184 PERFFVNEIIREKILMHYKKEIPYAVEIDTEDFFEEDEIIRMRSV-IMVERDSQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK + AR D++ F K+V++E+ VKV +NWR + LK +GY
Sbjct: 243 HKGTALKRVGVEARKDLQKFFGKQVHIELYVKVNKNWRSNSNQLKRFGY 291
>gi|116333398|ref|YP_794925.1| GTPase [Lactobacillus brevis ATCC 367]
gi|116098745|gb|ABJ63894.1| GTPase [Lactobacillus brevis ATCC 367]
Length = 301
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 187/304 (61%), Gaps = 21/304 (6%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+P++KS ++G+PNVGKST N++IGQK++I++N QTTR++I GI + E Q++ D
Sbjct: 3 NPDYKSGFVAIVGRPNVGKSTFLNRVIGQKIAIMSNTAQTTRNKIQGIYTTDEAQIVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------ 219
TPG+ + K + D M+++ SA D ++ +V+A + + G GD+
Sbjct: 63 TPGVHKPKSKLGD-YMVQSAMSALNEVDAVLFMVNAAE---------KRGAGDNFIIDRL 112
Query: 220 -KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 278
K P+ L++NK D +KP ++ +E Y+ V P+SA G+ V+++ ++ ++
Sbjct: 113 KNVKAPVYLLINKIDQVKPDDLLPVMEQYQTALPWKAVYPISALEGNNVDELLTGLVEQM 172
Query: 279 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 338
P GP YYP D V++HPERF V E+IREKIFM R EVP++ V + S K + I+
Sbjct: 173 PNGPQYYPADQVTDHPERFVVSELIREKIFMLTREEVPHSVAVEIESMKQKDEDHVHIEA 232
Query: 339 EIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLK 398
I+VE+ +QK I+IGKGG LK + T AR DIE L KVYL++ VKV+ NWR LLK
Sbjct: 233 TIIVERPTQKGIMIGKGGSMLKKIGTLARQDIEHLLGSKVYLQLWVKVQPNWRDKSTLLK 292
Query: 399 HYGY 402
YGY
Sbjct: 293 SYGY 296
>gi|255027717|ref|ZP_05299703.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-003]
Length = 301
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIVEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 128 IAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L+ YG+
Sbjct: 248 KQGQMLKQIGMRARKEIERLLGSKVFLEIWVKVQKNWRDKEHYLQDYGF 296
>gi|150026004|ref|YP_001296830.1| GTP-binding protein Era [Flavobacterium psychrophilum JIP02/86]
gi|149772545|emb|CAL44028.1| GTP-binding protein Era [Flavobacterium psychrophilum JIP02/86]
Length = 293
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QMIL DTPGII+
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGIIKPAY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M +S MM V+SA +AD +V +V+ + + + + + K+P+LL+LNK D
Sbjct: 69 EMQES-MMNFVKSAFEDADVLVYMVEIGEQDLKDEAFFNKIIN---AKIPVLLLLNKIDT 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++ ++ E+ P+SA V ++ D I+ LP PAYYPKD +++ P
Sbjct: 125 SNQAQLEAQVAFWTAKVPNAEIFPISALQNFNVPEVFDRIIKLLPESPAYYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI + Y E+PYA ++ + I+ I+VE+ +QK I+IG
Sbjct: 185 ERFFVNETIREKILIHYSKEIPYAVEIVTEEFFEDDNIIR-IRSLIMVERETQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ALK + +R D+E F K++++E+ VKV +NWR + +LK +GY
Sbjct: 244 KGEALKRVGVESRADLEKFFGKQIHIELYVKVNKNWRSNVNMLKRFGYN 292
>gi|16803502|ref|NP_464987.1| GTP-binding protein Era [Listeria monocytogenes EGD-e]
gi|46907690|ref|YP_014079.1| GTP-binding protein Era [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093486|ref|ZP_00231249.1| GTP-binding protein Era [Listeria monocytogenes str. 4b H7858]
gi|47095413|ref|ZP_00233023.1| GTP-binding protein Era [Listeria monocytogenes str. 1/2a F6854]
gi|226224063|ref|YP_002758170.1| GTP binding protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824479|ref|ZP_05229480.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-194]
gi|254827750|ref|ZP_05232437.1| GTP-binding protein Era [Listeria monocytogenes FSL N3-165]
gi|254852087|ref|ZP_05241435.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-503]
gi|254912136|ref|ZP_05262148.1| GTP-binding protein Era [Listeria monocytogenes J2818]
gi|254936464|ref|ZP_05268161.1| GTP-binding protein Era [Listeria monocytogenes F6900]
gi|255521277|ref|ZP_05388514.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-175]
gi|284801849|ref|YP_003413714.1| GTP-binding protein Era [Listeria monocytogenes 08-5578]
gi|284994991|ref|YP_003416759.1| GTP-binding protein Era [Listeria monocytogenes 08-5923]
gi|300765605|ref|ZP_07075584.1| GTP-binding protein Era [Listeria monocytogenes FSL N1-017]
gi|386043773|ref|YP_005962578.1| GTP-binding protein Era [Listeria monocytogenes 10403S]
gi|386047114|ref|YP_005965446.1| GTP-binding protein Era [Listeria monocytogenes J0161]
gi|386050438|ref|YP_005968429.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-561]
gi|386053715|ref|YP_005971273.1| GTP-binding protein Era [Listeria monocytogenes Finland 1998]
gi|386732201|ref|YP_006205697.1| GTPase Era [Listeria monocytogenes 07PF0776]
gi|404281019|ref|YP_006681917.1| GTP-binding protein [Listeria monocytogenes SLCC2755]
gi|404283954|ref|YP_006684851.1| GTP-binding protein [Listeria monocytogenes SLCC2372]
gi|404286884|ref|YP_006693470.1| GTP-binding protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404410761|ref|YP_006696349.1| GTP-binding protein [Listeria monocytogenes SLCC5850]
gi|404413540|ref|YP_006699127.1| GTP-binding protein [Listeria monocytogenes SLCC7179]
gi|405752682|ref|YP_006676147.1| GTP-binding protein [Listeria monocytogenes SLCC2378]
gi|405755620|ref|YP_006679084.1| GTP-binding protein [Listeria monocytogenes SLCC2540]
gi|405758510|ref|YP_006687786.1| GTP-binding protein [Listeria monocytogenes SLCC2479]
gi|406704235|ref|YP_006754589.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L312]
gi|417316008|ref|ZP_12102666.1| GTPase Era [Listeria monocytogenes J1816]
gi|21263579|sp|Q8Y750.1|ERA_LISMO RecName: Full=GTPase Era
gi|67460115|sp|Q71ZK8.1|ERA_LISMF RecName: Full=GTPase Era
gi|259645949|sp|C1KVA9.1|ERA_LISMC RecName: Full=GTPase Era
gi|16410891|emb|CAC99540.1| lmo1462 [Listeria monocytogenes EGD-e]
gi|46880959|gb|AAT04256.1| GTP-binding protein Era [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016234|gb|EAL07157.1| GTP-binding protein Era [Listeria monocytogenes serotype 1/2a str.
F6854]
gi|47018162|gb|EAL08932.1| GTP-binding protein Era [Listeria monocytogenes str. 4b H7858]
gi|225876525|emb|CAS05234.1| Putative GTP binding protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258600129|gb|EEW13454.1| GTP-binding protein Era [Listeria monocytogenes FSL N3-165]
gi|258605386|gb|EEW17994.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-503]
gi|258609056|gb|EEW21664.1| GTP-binding protein Era [Listeria monocytogenes F6900]
gi|284057411|gb|ADB68352.1| GTP-binding protein Era [Listeria monocytogenes 08-5578]
gi|284060458|gb|ADB71397.1| GTP-binding protein Era [Listeria monocytogenes 08-5923]
gi|293590107|gb|EFF98441.1| GTP-binding protein Era [Listeria monocytogenes J2818]
gi|293593717|gb|EFG01478.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-194]
gi|300513706|gb|EFK40774.1| GTP-binding protein Era [Listeria monocytogenes FSL N1-017]
gi|328465505|gb|EGF36734.1| GTPase Era [Listeria monocytogenes J1816]
gi|345534105|gb|AEO03546.1| GTP-binding protein Era [Listeria monocytogenes J0161]
gi|345537007|gb|AEO06447.1| GTP-binding protein Era [Listeria monocytogenes 10403S]
gi|346424284|gb|AEO25809.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-561]
gi|346646366|gb|AEO38991.1| GTP-binding protein Era [Listeria monocytogenes Finland 1998]
gi|384390959|gb|AFH80029.1| GTPase Era [Listeria monocytogenes 07PF0776]
gi|404221882|emb|CBY73245.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2378]
gi|404224820|emb|CBY76182.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2540]
gi|404227654|emb|CBY49059.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2755]
gi|404230587|emb|CBY51991.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC5850]
gi|404233456|emb|CBY54859.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2372]
gi|404236392|emb|CBY57794.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2479]
gi|404239239|emb|CBY60640.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC7179]
gi|404245813|emb|CBY04038.1| GTP-binding protein (Bex protein) [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|406361265|emb|CBY67538.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L312]
gi|441471149|emb|CCQ20904.1| GTPase Era [Listeria monocytogenes]
gi|441474277|emb|CCQ24031.1| GTPase Era [Listeria monocytogenes N53-1]
Length = 301
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 128 IAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L+ YG+
Sbjct: 248 KQGQMLKQIGMRARKEIERLLGSKVFLEIWVKVQKNWRDKEHYLQDYGF 296
>gi|424714338|ref|YP_007015053.1| GTPase Era [Listeria monocytogenes serotype 4b str. LL195]
gi|424013522|emb|CCO64062.1| GTPase Era [Listeria monocytogenes serotype 4b str. LL195]
Length = 337
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 47 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 105
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 106 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 163
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 164 IAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHP 223
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 224 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 283
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L+ YG+
Sbjct: 284 KQGQMLKQIGMRARKEIERLLGSKVFLEIWVKVQKNWRDKEHYLQDYGF 332
>gi|18310997|ref|NP_562931.1| GTP-binding protein Era [Clostridium perfringens str. 13]
gi|21263575|sp|Q8XIU8.1|ERA_CLOPE RecName: Full=GTPase Era
gi|18145679|dbj|BAB81721.1| GTP-binding protein [Clostridium perfringens str. 13]
Length = 296
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VLNK D
Sbjct: 67 HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIVEQLKNQK--APVIFVLNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D++++
Sbjct: 125 SSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K I+IGK
Sbjct: 185 ERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + + AR ++E FL+ KV ++I VKV++ WR + LLK GY
Sbjct: 245 NGQTLKKIGSTARYELERFLRAKVNIKIWVKVRKEWRDNTSLLKELGY 292
>gi|366053203|ref|ZP_09450925.1| GTPase Era [Lactobacillus suebicus KCTC 3549]
Length = 301
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 183/297 (61%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL NQ+IGQK++I++N QTTR++I GI + + Q++ D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNQVIGQKVAIMSNVAQTTRNKIQGIYTSNDAQIVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI + + + D M ++ SA D I+ +V+A + D + E + K PI
Sbjct: 63 TPGIHKPQTKLGD-FMERSALSALDEVDAILFVVNATENKGAGDNFIIERL--KKVHQPI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D +KP + YE+ D +++P+SA G+ V+ + + ++ LP GP YY
Sbjct: 120 YLVINKIDQVKPERLLDIKAQYEQSLDYQKIVPISALNGNNVDQLIEELVNHLPNGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D VS+HPERF VGE+IREK+F R EVP++ ++V K R I I+VE+
Sbjct: 180 PADQVSDHPERFVVGEMIREKVFQLTRQEVPHSVAIDVEQIKRRDDRTIDISATIIVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGG LK + T AR DIE + KVYL++ VKV E WR +LK YGY
Sbjct: 240 GQKGIIIGKGGSMLKKIGTMAREDIERLMGDKVYLKLWVKVVEGWRDKGSMLKSYGY 296
>gi|289434744|ref|YP_003464616.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422419066|ref|ZP_16496021.1| GTP-binding protein Era [Listeria seeligeri FSL N1-067]
gi|289170988|emb|CBH27530.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313633219|gb|EFS00091.1| GTP-binding protein Era [Listeria seeligeri FSL N1-067]
Length = 301
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 128 ISPEELFKLIEQYRELLDFEEIIPISALQGNNVPNLLEQTNANLEVGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L YG+
Sbjct: 248 KQGQMLKQIGMRARKEIESLLGSKVFLEIWVKVQKNWRDKEHYLHDYGF 296
>gi|451948992|ref|YP_007469587.1| GTP-binding protein Era [Desulfocapsa sulfexigens DSM 10523]
gi|451908340|gb|AGF79934.1| GTP-binding protein Era [Desulfocapsa sulfexigens DSM 10523]
Length = 308
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 193/309 (62%), Gaps = 18/309 (5%)
Query: 106 DYASHPNHK---SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 162
D+ S P +++G PN GKSTL N ++GQK+SIV++KPQTTR+RILG+ + +YQ++
Sbjct: 6 DFLSEPIRSGMVAIVGPPNAGKSTLMNYLLGQKISIVSHKPQTTRNRILGVVNDDKYQIV 65
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD-ACKAPERID-----EILE--E 214
L DTPG+ K L+ M++ + D IV ++D + PE+++ E++E E
Sbjct: 66 LLDTPGL-HKARQPLNREMVRIAMESLNEVDVIVYMIDVSLPLPEKVEQEKNKEMMEQME 124
Query: 215 GVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWI 274
GV P++LVLNK DL++ + ++ Y + V+P+SA G G E + + +
Sbjct: 125 GVAA-----PVILVLNKVDLLEKERLLPMMKRYSELFPFHGVLPLSALTGEGTEVVVEEL 179
Query: 275 LTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK- 333
L LPLGP Y+P+D+ ++ ERF EI+REK+F+ E+PY+ V + S++ T K
Sbjct: 180 LKLLPLGPRYFPEDVPTDASERFLAAEIVREKVFILTGQEIPYSTAVTIESFQDDETKKM 239
Query: 334 DFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQD 393
I IV+E+NSQK I+IGKGGK LK + TAAR DIE L +KV L++ VKV+++W +D
Sbjct: 240 TTIHATIVLERNSQKGIVIGKGGKKLKSIGTAARKDIEKMLGQKVLLKLWVKVRKDWSKD 299
Query: 394 EGLLKHYGY 402
E LK G+
Sbjct: 300 ERFLKELGF 308
>gi|110798867|ref|YP_696695.1| GTP-binding protein Era [Clostridium perfringens ATCC 13124]
gi|123148605|sp|Q0TNU5.1|ERA_CLOP1 RecName: Full=GTPase Era
gi|110673514|gb|ABG82501.1| GTP-binding protein Era [Clostridium perfringens ATCC 13124]
Length = 296
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGEDYQMIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VLNK D
Sbjct: 67 HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQK--APVIFVLNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D++++
Sbjct: 125 SSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K I+IGK
Sbjct: 185 ERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + + AR ++E FL+ KV ++I VKV++ WR + LLK GY
Sbjct: 245 NGQTLKKIGSTARYELERFLRAKVNIKIWVKVRKEWRDNTSLLKELGY 292
>gi|305666362|ref|YP_003862649.1| putative GTP-binding protein [Maribacter sp. HTCC2170]
gi|88708354|gb|EAR00591.1| putative GTP-binding protein [Maribacter sp. HTCC2170]
Length = 296
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 186/289 (64%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPGII K
Sbjct: 10 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPGII-KPA 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + + DE E + + ++P+LL+LNK D
Sbjct: 69 YELQSSMMDFVKSAFEDADVLLYMVEIGEKALK-DEKFFEKIKN--SEIPVLLLLNKIDA 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++++++++ E+ PVSA V+ + + IL LP PAYYPKD +++ P
Sbjct: 126 STQEILEEQIQYWQEQLPTVEIHPVSALNNFNVKGVFERILELLPTSPAYYPKDQLTDKP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI M Y+ E+PYA ++ + I+ I+VE++SQK I+IG
Sbjct: 186 ERFFVNETIREKILMFYKKEIPYAVEIETEEFFEDEDIIR-IRAVIMVERDSQKGIIIGH 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR D+E F K+++LE+ VKV +NWR E LK +GY
Sbjct: 245 KGNALKRVGVEARKDLEKFFGKQIHLELYVKVNKNWRSSERQLKRFGYN 293
>gi|429748609|ref|ZP_19281791.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429170496|gb|EKY12168.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 293
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 189/295 (64%), Gaps = 9/295 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKS+L N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSSLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
II K + L + MM V+SA +AD ++ +V+ + E DE + + + +P+LL+
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEVGEK-ELKDETFFKKINTLQ--VPVLLL 117
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D + +++ +++ E+ P+SA + + + + IL LP PA++PKD
Sbjct: 118 INKIDTTDQQLLEEQVAYWQAQVPKAEIYPISALHSFHTDVVFNRILELLPESPAFFPKD 177
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE++SQK
Sbjct: 178 QLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRAVIMVERDSQK 236
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
I+IG G+ALK + AAR D+E F K+++LE+ VKV ++WR +E L+ +GY
Sbjct: 237 GIIIGHRGEALKRVGIAARADMEKFFGKQIHLELFVKVNKDWRSNERQLRRFGYA 291
>gi|429767135|ref|ZP_19299348.1| ribosome biogenesis GTPase Era [Clostridium celatum DSM 1785]
gi|429181567|gb|EKY22724.1| ribosome biogenesis GTPase Era [Clostridium celatum DSM 1785]
Length = 296
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DT GI + K
Sbjct: 8 TIVGRPNVGKSTLTNQIMGEKLSIVSNKPQTTRNNIQTILTGEDYQIVFVDTSGIHKPKN 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+ S D ++ L++ C R D+ + E + K K P+ LV+NK D
Sbjct: 68 KLGDYMVNSATESIK-EVDLVLFLINPCDEIGRGDKFILEAI--KKQKAPVFLVVNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++AK L+ Y K D E++P+SA G V+ + ++ K+P GP YYP+D++++
Sbjct: 125 NSHEKVAKTLDMYSKEYDFAEIVPISALKGKNVDTLVRLMVEKMPEGPQYYPEDMITDAN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK R+E+P+ V+++ K I+V+++ EK+S K I+IGK
Sbjct: 185 ERFIVAEIVREKTLKNLRDEIPHGIAVDIIQMKQNEKGTYHIEVDLICEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G +LK + AR +IE FL KV L+I VKV++ WR + LLK GY
Sbjct: 245 NGASLKKIGETARYEIERFLNAKVNLKIWVKVRKEWRDNNLLLKELGY 292
>gi|315282359|ref|ZP_07870786.1| GTP-binding protein Era [Listeria marthii FSL S4-120]
gi|313613991|gb|EFR87708.1| GTP-binding protein Era [Listeria marthii FSL S4-120]
Length = 301
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 128 IAPEDLFKLIEQYRELMDFEEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L+ YG+
Sbjct: 248 KQGQMLKQIGMRARKEIESLLGSKVFLEIWVKVQKNWRDKEHYLQDYGF 296
>gi|373954477|ref|ZP_09614437.1| GTP-binding protein Era-like-protein [Mucilaginibacter paludis DSM
18603]
gi|373891077|gb|EHQ26974.1| GTP-binding protein Era-like-protein [Mucilaginibacter paludis DSM
18603]
Length = 292
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 181/293 (61%), Gaps = 16/293 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPN GKSTL N ++G+K+SI+T K QTTRHRILGI + +YQ++ DTPGII K
Sbjct: 9 SIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRILGIVNEEDYQIVFSDTPGII-KPH 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL-----PILLVL 229
+ L MM V + ++AD ++++ D E+ DE D DKL P+++++
Sbjct: 68 YALQETMMHQVSGSLVDADMVLLVTDIN---EKYDE------SDVMDKLKGSTAPLVVII 118
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D + +K+ ++E+ V +SA H V+ I + +L LP P YY KD
Sbjct: 119 NKIDKSDEETVKQKIAYWEETLKPTAVFAISALLNHNVQAIMNLVLDSLPEHPPYYEKDF 178
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++ +RFF EIIREKIF Y E+PY+ +V + ++ P I EI+VE++SQK
Sbjct: 179 LTDRNDRFFASEIIREKIFKIYEKEIPYSTEVIITAFIEDPKIYR-ISAEIIVERDSQKN 237
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIG GG+ LK + T AR D+E+F Q+KV+LE+ VKV +WR + LK +GY
Sbjct: 238 ILIGTGGEMLKKVGTYARKDMEEFFQRKVFLEMFVKVIPDWRSKKNYLKKFGY 290
>gi|390954552|ref|YP_006418310.1| GTP-binding protein Era [Aequorivita sublithincola DSM 14238]
gi|390420538|gb|AFL81295.1| GTP-binding protein Era [Aequorivita sublithincola DSM 14238]
Length = 295
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 189/292 (64%), Gaps = 7/292 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++L DTPGII K
Sbjct: 10 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGDDFQVLLSDTPGII-KPA 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+SA +AD ++ LV+ + E DE + + K+P+LL++NK D+
Sbjct: 69 YQLQESMMDFVKSAFEDADILLYLVELGEK-ELKDEAFFNKITN--SKIPVLLLINKIDI 125
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+++ L+ W EK + E+ +SA GV ++ + I+ LP PA+YPKD +++
Sbjct: 126 GNEELLSEALKLWQEKVPNA-EIFAISALQNFGVPEVFNRIIELLPESPAFYPKDQLTDK 184
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV E IREKI + Y+ E+PY+ +++ + T I+ I+VE+ +QK I+IG
Sbjct: 185 PERFFVNEAIREKILIHYKKEIPYSVEIDTEEFFEDETIIR-IRSVIMVERETQKGIIIG 243
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G ALK + T AR D++ F K+++LE+ VKV +NWR DE L+ +GY +
Sbjct: 244 HKGSALKRVGTEARKDLQKFFGKQIHLELYVKVAKNWRSDERQLRRFGYNNK 295
>gi|443242418|ref|YP_007375643.1| GTP-binding protein [Nonlabens dokdonensis DSW-6]
gi|442799817|gb|AGC75622.1| GTP-binding protein [Nonlabens dokdonensis DSW-6]
Length = 296
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 193/293 (65%), Gaps = 11/293 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q ++ DTPGII K
Sbjct: 9 NIVGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDFQAVISDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM+ V++A +ADCI+ +V+ + E +E E+ + ++P+ +++NK D
Sbjct: 68 YKLQESMMEFVKNAFEDADCILYMVELGEK-ELKNEAFEKRLT--YAEVPVFVLINKIDK 124
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+P ++ + + W E+ + E+ +SA GV + + I+ LP+ PA+YPKD +++
Sbjct: 125 GQPNQLEEAVAHWKERLPNA-EIFAISALENFGVPQVLERIVESLPVSPAFYPKDALTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PERFFV E IREKI + Y+ E+PY+ +++ + +D I++ I+VE+ +QK I+
Sbjct: 184 PERFFVNESIREKILIHYKKEIPYSVEIDTEEFF---EDEDIIRIRSVIMVERETQKGII 240
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
IG G A+K + T AR D++ F K+V++E+ VKV +NWR DE L+ +GY G
Sbjct: 241 IGHKGSAIKRVGTEARKDLQKFFGKQVHIELYVKVNKNWRSDEKQLRRFGYKG 293
>gi|110802047|ref|YP_699296.1| GTP-binding protein Era [Clostridium perfringens SM101]
gi|168204746|ref|ZP_02630751.1| GTP-binding protein Era [Clostridium perfringens E str. JGS1987]
gi|168208717|ref|ZP_02634342.1| GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626]
gi|168212948|ref|ZP_02638573.1| GTP-binding protein Era [Clostridium perfringens CPE str. F4969]
gi|168215642|ref|ZP_02641267.1| GTP-binding protein Era [Clostridium perfringens NCTC 8239]
gi|169343587|ref|ZP_02864586.1| GTP-binding protein Era [Clostridium perfringens C str. JGS1495]
gi|182624448|ref|ZP_02952232.1| GTP-binding protein Era [Clostridium perfringens D str. JGS1721]
gi|422346681|ref|ZP_16427595.1| GTPase Era [Clostridium perfringens WAL-14572]
gi|122956577|sp|Q0SRG1.1|ERA_CLOPS RecName: Full=GTPase Era
gi|110682548|gb|ABG85918.1| GTP-binding protein Era [Clostridium perfringens SM101]
gi|169298147|gb|EDS80237.1| GTP-binding protein Era [Clostridium perfringens C str. JGS1495]
gi|170663559|gb|EDT16242.1| GTP-binding protein Era [Clostridium perfringens E str. JGS1987]
gi|170713142|gb|EDT25324.1| GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626]
gi|170715652|gb|EDT27834.1| GTP-binding protein Era [Clostridium perfringens CPE str. F4969]
gi|177910451|gb|EDT72828.1| GTP-binding protein Era [Clostridium perfringens D str. JGS1721]
gi|182382082|gb|EDT79561.1| GTP-binding protein Era [Clostridium perfringens NCTC 8239]
gi|373226226|gb|EHP48553.1| GTPase Era [Clostridium perfringens WAL-14572]
Length = 296
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VLNK D
Sbjct: 67 HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQK--APVIFVLNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D++++
Sbjct: 125 SSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K I+IGK
Sbjct: 185 ERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + + AR ++E FL+ KV ++I VKV++ WR + LLK GY
Sbjct: 245 NGQTLKKIGSTARYELERFLRAKVNIKIWVKVRKEWRDNTSLLKELGY 292
>gi|347537387|ref|YP_004844812.1| GTP-binding protein Era [Flavobacterium branchiophilum FL-15]
gi|345530545|emb|CCB70575.1| GTP-binding protein Era [Flavobacterium branchiophilum FL-15]
Length = 293
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 184/290 (63%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q+IL DTPGII+
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGDDFQLILSDTPGIIKPAY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M +SMM V+SA +AD ++ +V+ + + D + + K+P+LL+LNK D
Sbjct: 69 EMQESMM-NFVKSAFEDADILIYMVEIGEQELKDDAFFNKII---HSKIPVLLLLNKIDQ 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ +++ W EK + E+ P+SA V ++ I++ LP PAYYPKD +++
Sbjct: 125 SNQEVLEQQVAFWSEKVPNA-EIFPISALQNFNVPEVFQRIISLLPESPAYYPKDQLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV E IREKI + Y E+PYA ++ + T I+ I+VE+++QK I+IG
Sbjct: 184 PERFFVNETIREKILLNYSKEIPYAVEIVTEEFIENDTIIR-IRSVIMVERDTQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR D+E F K++++E+ VKV +NWR + +LK +GY
Sbjct: 243 HKGAALKKVGMEARADLELFFGKQIHIELYVKVNKNWRSNATMLKRFGYN 292
>gi|325106043|ref|YP_004275697.1| GTP-binding protein Era [Pedobacter saltans DSM 12145]
gi|324974891|gb|ADY53875.1| GTP-binding protein Era [Pedobacter saltans DSM 12145]
Length = 292
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 187/290 (64%), Gaps = 10/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPN GKSTL N ++G+K++I+T+K QTTRHRI+GI + +YQ++ DTPGII K
Sbjct: 9 SIVGKPNAGKSTLMNTLVGEKMAIITSKAQTTRHRIIGIVNEEDYQIVFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+ + ++AD ++ + D + + D +L++ G +L+++NK D
Sbjct: 68 YKLQESMMDAVQGSLVDADILLFVTDINEKHDEQD-VLDKIKG---STAKLLVLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +K+ ++ + D ++ +SA + + VE I +I LP P YY KD ++
Sbjct: 124 STQEKVEEKINYWRDKLNPDGIVGISALHNYNVEQIMGFIKDNLPEHPPYYDKDELTTRS 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERFFV E+IREKIF Y+ E+PY+ +V V S+K +K+ I++ E+VVE+ SQK ILI
Sbjct: 184 ERFFVSEMIREKIFKFYKKEIPYSTEVLVTSFK---ESKNLIKISAEVVVERESQKNILI 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G GG LK + T AR D+EDFLQKKV+LEI VKV +WR LK +GY
Sbjct: 241 GTGGSMLKKIGTYARQDMEDFLQKKVFLEIFVKVIPDWRNRGNYLKSFGY 290
>gi|311031640|ref|ZP_07709730.1| GTP-binding protein Era [Bacillus sp. m3-13]
Length = 305
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 185/291 (63%), Gaps = 6/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI + K
Sbjct: 15 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVFTQDDAQIVFIDTPGIHKPK- 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +++A + + DE + E + + P+ LV+NK D
Sbjct: 74 HKLGDFMMKVAQNTLKEVDLVLFMINAKEGLGKGDEFIIEKLKE--TSTPVYLVINKIDE 131
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y+ E++P+SA G+ VE + D I LP GP YYP D V++HP
Sbjct: 132 VHPDDLLPLMETYKALYPFKEIVPISALQGNNVEVLLDQIKKFLPEGPQYYPADQVTDHP 191
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEIVVEKNSQKIILI 352
ERF V E+IREK+ R EVP++ V + S K R KD IQ +VVE++SQK I+I
Sbjct: 192 ERFIVAELIREKVLHLTREEVPHSIAVAIDSMKKREN-KDMVDIQATVVVERDSQKGIVI 250
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
GK GK LK + AR+DIE L KV+LE+ VKV+++WR + L+ +G+
Sbjct: 251 GKQGKVLKEVGQKARVDIEALLGSKVFLELWVKVQKDWRNKQSQLRDFGFN 301
>gi|366085898|ref|ZP_09452383.1| GTPase Era [Lactobacillus zeae KCTC 3804]
Length = 300
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 186/300 (62%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 222
+ K + LD M K S D I+ +V A DE ++G GD + K
Sbjct: 65 HKPK-NELDDYMDKAALSTLNQVDAILFMVAA-------DE--QKGAGDAYIMRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L+LNK DL+KP ++ +E Y+ D +V P+SA G+ V+D+ + LP+GP
Sbjct: 115 KPVYLILNKIDLVKPDDLLPLIESYQHDYDFAQVFPISATMGNNVDDLLTSLTAALPVGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREK+ R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKVLELTRDEVPHATAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|345022124|ref|ZP_08785737.1| GTP-binding protein [Ornithinibacillus scapharcae TW25]
Length = 300
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 182/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q I DTPGI + K
Sbjct: 11 AIIGRPNVGKSTFMNKVIGQKIAIMSDKPQTTRNKIQGVLTQNDAQFIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D ++ +++A + R D+ + + + + K P+ LV+NK DL
Sbjct: 70 HRLGDFMVKIAENTLNEVDAVLFMINADEGYGRGDQFIIDRL--ERVKSPVFLVVNKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E+Y+ D +E+IP+SA G+ V + D + LP GP +YP D V++HP
Sbjct: 128 VHPDKLLPLIEFYKDKYDFEEIIPISALQGNNVNRLLDVLKEHLPEGPQFYPADQVTDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + + + R + FIQ IV E+ SQK ILIGK
Sbjct: 188 ERFIISELIREKVLHLTREEIPHSIAVVIENIEKRESNAIFIQAVIVTERKSQKGILIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KVYLE+ VKV+++WR + L YG+
Sbjct: 248 QGSMLKNIGKDARKDIESLLGSKVYLELWVKVQKDWRNKQSQLYEYGF 295
>gi|308535355|ref|YP_003933744.1| GTP-binding protein Era [Geobacter bemidjiensis Bem]
gi|308052700|gb|ADO00832.1| LOW QUALITY PROTEIN: GTP-binding protein Era [Geobacter
bemidjiensis Bem]
Length = 297
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 178/292 (60%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+KL I ++KPQTTR+RI GI + P Q++ DTPGI K
Sbjct: 12 SIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNRIKGIHNVPGGQIVFIDTPGIHRAK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHKDKLPILLVLN 230
L+ M+ S+ D I+ LVD PE+ I E+L GV P++LV+N
Sbjct: 71 SRLNKFMVDEALSSVQGVDLILFLVDGAVDPEKEAGMIKEVLS-GV-----DAPVILVMN 124
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K DL+ GE+ +++ Y E+IPVSA G GVE + + LP GP Y+P DI+
Sbjct: 125 KIDLVPKGELLERMSCYGDTYPFKEIIPVSAGTGDGVEQLVQLVHGLLPEGPCYFPDDIL 184
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++ PERF V EI+REKIF +EVPY+ V V S+K R I I VE++SQK I
Sbjct: 185 TDVPERFIVAEIVREKIFRLTHDEVPYSTAVVVDSFKERENGVVAISATINVERDSQKGI 244
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+IGK G+ LK + T +R +IE L KV+LE+ V+V W + +LK +GY
Sbjct: 245 IIGKKGEMLKRIGTQSRQEIERLLDTKVFLELFVRVSGEWSDNSRMLKEFGY 296
>gi|422874931|ref|ZP_16921416.1| GTPase Era [Clostridium perfringens F262]
gi|380304126|gb|EIA16418.1| GTPase Era [Clostridium perfringens F262]
Length = 296
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + D ++ L + C+ R D+ + E + K P++ VLNK D
Sbjct: 67 HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQFKNQK--APVIFVLNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D++++
Sbjct: 125 SSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K I+IGK
Sbjct: 185 ERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + + AR ++E FL+ KV ++I VKV++ WR + LLK GY
Sbjct: 245 NGQTLKKIGSTARYELERFLRAKVNIKIWVKVRKEWRDNTSLLKELGY 292
>gi|261405616|ref|YP_003241857.1| GTP-binding protein Era [Paenibacillus sp. Y412MC10]
gi|261282079|gb|ACX64050.1| GTP-binding protein Era [Paenibacillus sp. Y412MC10]
Length = 300
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + P+ Q++ DTPGI +++
Sbjct: 12 AIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTPDSQVVFLDTPGIHKRQS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M + + G + + LVDA + D + E + K K PI+LV+NK D
Sbjct: 72 KLGDYMNQTALSTLG-EVEAALFLVDASEGIGGGDRYIAEQL--QKIKTPIILVMNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+P + +E Y K D E++P+SAK G V + + I LP GP YYP+D V++HP
Sbjct: 129 IEPPALLPLIEQYRKLHDFAEIVPISAKLGSNVNTLLEQIQKYLPPGPQYYPEDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI R EVP++ V + + +I I VE++SQK I+IGK
Sbjct: 189 EQFVCAELIREKILHMTREEVPHSIAVTIEDMRVEENGTVYISAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DI+ L K++LE+ VKVK++WR E +L+ G+
Sbjct: 249 QGALLKEVGRQARQDIQRLLGSKIFLELWVKVKKDWRNQERVLRDLGF 296
>gi|212550703|ref|YP_002309020.1| GTP-binding protein Era [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548941|dbj|BAG83609.1| GTP-binding protein Era [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 300
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 183/299 (61%), Gaps = 13/299 (4%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G KLSI+T+K QTTRHRI+GI + P Q++ DTPG
Sbjct: 9 HKSGFVNIVGNPNVGKSTLMNTLVGGKLSIITSKAQTTRHRIIGIVNKPNVQIVFSDTPG 68
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
I+ + L M+ SA +AD ++ + D + D L++ + LPILL+
Sbjct: 69 ILRPN-YKLQKKMLNFSESALEDADILLYVSDIKNQLVKTDFFLKKM---QQTNLPILLI 124
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
LNK DL ++ +K+ Y K E+IP+SA + ++ I LP P Y+ K+
Sbjct: 125 LNKIDLFNQKQLEQKVIEYHKILPNAEIIPISAINQFNTDYLQKRIEKLLPESPPYFEKN 184
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 346
+++ P RFF EIIREK+ + Y+ E+PY+ +V + +K + KD I ++ I+ E++S
Sbjct: 185 TITDRPARFFSTEIIREKVLLYYQKEIPYSVEVTIELFKEQ---KDLIWIKAIIITERDS 241
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
QK I+IGK GKALK + AR DIE F KK++LE+ VKV++NWR + LLK YGY +
Sbjct: 242 QKKIIIGKDGKALKRIGFTARKDIEKFFDKKIFLEMHVKVEKNWRNRDNLLKRYGYKSE 300
>gi|239637621|ref|ZP_04678593.1| GTP-binding protein Era [Staphylococcus warneri L37603]
gi|239596839|gb|EEQ79364.1| GTP-binding protein Era [Staphylococcus warneri L37603]
Length = 299
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK + D I+ +V+ + R DE + + + D K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDLK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+++ D E++P+SA G V+ D + + LP GP YYP D +S+HP
Sbjct: 127 VHPDALMPKIEKYQEYMDFTEIVPISALEGLNVDHFIDVLKSYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARHDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQIGY 294
>gi|363582357|ref|ZP_09315167.1| GTPase Era [Flavobacteriaceae bacterium HQM9]
Length = 296
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 190/297 (63%), Gaps = 13/297 (4%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
NHK+ ++G PNVGKSTL N +IG+KLSI+T+K QTTRHRILGI +G ++Q+I DTP
Sbjct: 3 NHKAGFVNIIGNPNVGKSTLMNALIGEKLSIITSKAQTTRHRILGIVNGDDFQVIFSDTP 62
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
GII K + L + MM V+SA +AD ++ +V+ + E DE + + K+P+LL
Sbjct: 63 GII-KPAYELQTSMMDFVKSAFEDADILIYMVEIGEK-ELKDEQFFNKINN--SKIPVLL 118
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+LNK D + +++ ++ E++P+SA ++ + D I+ LP+ PA+YPK
Sbjct: 119 LLNKIDKSNQETLEEQVAYWTHKVSNAEILPISALEKFNIQTVFDRIVDLLPVSPAFYPK 178
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 345
D +++ PERFFV E IREKI + Y+ E+PYA +V S++ + I++ I+VE+
Sbjct: 179 DQLTDKPERFFVNEAIREKILLHYKKEIPYAVEVVTESFE---EDEKIIRINSIIMVERE 235
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+QK I+IG G A+K + AR D+E F K++++E+ KV +NWR ++ LK +GY
Sbjct: 236 TQKGIIIGHKGSAIKRVGQEARQDLEKFFGKQIHIELFCKVNKNWRSNQNQLKRFGY 292
>gi|16800567|ref|NP_470835.1| GTP-binding protein Era [Listeria innocua Clip11262]
gi|422412950|ref|ZP_16489909.1| GTP-binding protein Era [Listeria innocua FSL S4-378]
gi|422415965|ref|ZP_16492922.1| GTP-binding protein Era [Listeria innocua FSL J1-023]
gi|21263591|sp|Q92BP8.1|ERA_LISIN RecName: Full=GTPase Era
gi|16413972|emb|CAC96730.1| lin1499 [Listeria innocua Clip11262]
gi|313618893|gb|EFR90758.1| GTP-binding protein Era [Listeria innocua FSL S4-378]
gi|313623743|gb|EFR93885.1| GTP-binding protein Era [Listeria innocua FSL J1-023]
Length = 301
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 128 ISPEDLIKLIEQYRELMDFEEIIPISALEGNNVPNLLEQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L YG+
Sbjct: 248 KQGQMLKQIGMRARKEIESLLGSKVFLEIWVKVQKNWRDKEHYLHDYGF 296
>gi|253699692|ref|YP_003020881.1| GTP-binding protein Era [Geobacter sp. M21]
gi|259645946|sp|C6E2H7.1|ERA_GEOSM RecName: Full=GTPase Era
gi|251774542|gb|ACT17123.1| GTP-binding protein Era [Geobacter sp. M21]
Length = 297
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 177/292 (60%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+KL I ++KPQTTR+RI GI + P Q++ DTPGI K
Sbjct: 12 SIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNRIKGIHNVPGGQIVFIDTPGIHRAK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHKDKLPILLVLN 230
L+ M+ S+ D I+ LVD PE+ I E+L GV P++LV+N
Sbjct: 71 SRLNKFMVDEALSSVQGVDLILFLVDGAVDPEKEAGMIKEVLS-GV-----DAPVILVMN 124
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K DL+ GE+ +++ Y E+IPVSA G GVE + + LP GP Y+P DI+
Sbjct: 125 KIDLVPKGELLERMSCYGDTYPFKEIIPVSAGTGDGVEQLVQLVHGLLPEGPCYFPDDIL 184
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++ PERF V EI+REKIF +EVPY+ V V S+K R I I VE++SQK I
Sbjct: 185 TDVPERFIVAEIVREKIFRLTHDEVPYSTAVVVDSFKERENGVVAISATINVERDSQKGI 244
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+IGK G LK + T +R +IE L KV+LE+ V+V W + +LK +GY
Sbjct: 245 IIGKRGDMLKRIGTQSRQEIERLLDTKVFLELFVRVSGEWSDNSRMLKEFGY 296
>gi|73662498|ref|YP_301279.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|82592828|sp|Q49Y10.1|ERA_STAS1 RecName: Full=GTPase Era
gi|72495013|dbj|BAE18334.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 299
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ + D I+ +V+ + R DE + E + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMEML--KTIKTPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++E Y+K+ D E++P+SA G V+ + I + LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPRIEKYKKYMDFTEIVPISALEGLNVDHFINVIKSYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGE+IREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGELIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARQDIERLLGSKVYLELWVKVQKDWRNKVNFIRQMGY 294
>gi|167630513|ref|YP_001681012.1| GTP-binding protein Era [Heliobacterium modesticaldum Ice1]
gi|226741216|sp|B0TAF1.1|ERA_HELMI RecName: Full=GTPase Era
gi|167593253|gb|ABZ85001.1| GTP-binding protein era [Heliobacterium modesticaldum Ice1]
Length = 299
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL NQ+IG+K++I+++KPQTTR+RI+G+ + P+ Q I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTLMNQLIGKKVAIMSDKPQTTRNRIVGVLNAPKGQAIFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L +M+ R D I+ +VDA + P ++ + + + D K P+ LV+NK D
Sbjct: 69 HKLGEIMVTTARKTLGEVDLILYVVDASEEPGGGEQFISQMLKDIKT--PVFLVVNKMDT 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ E KK+ Y + E+IPVSAK ++ ++D I KLP GP YYP ++ P
Sbjct: 127 VSREEGLKKISQYSQMVAWQELIPVSAKEKTNLDRLKDLIFAKLPEGPLYYPAGSFTDQP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + E+IREK+ R E+P++ V + + P + I E++SQK ILIGK
Sbjct: 187 ERQLMAEMIREKVLHATREEIPHSVAVIIEHLQETPKGGMVVHATIFTERDSQKGILIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + AR +IE L +YLE+ VKVK++WRQ +L+ +G+
Sbjct: 247 GGSLLKEVGQKARQEIEALLGTSIYLELWVKVKKDWRQRPDVLRSFGF 294
>gi|116872893|ref|YP_849674.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461073|sp|A0AIR3.1|ERA_LISW6 RecName: Full=GTPase Era
gi|116741771|emb|CAK20895.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 301
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 128 ISPEDLFKLIEQYRELLDFEEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L YG+
Sbjct: 248 KQGQMLKQIGMRARKEIESLLGSKVFLEIWVKVQKNWRDKEHYLHDYGF 296
>gi|408372018|ref|ZP_11169770.1| GTPase Era [Galbibacter sp. ck-I2-15]
gi|407742575|gb|EKF54170.1| GTPase Era [Galbibacter sp. ck-I2-15]
Length = 295
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 188/292 (64%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +IG+KLSI+T+K QTTRHRI GI +G ++Q++ DTPGII K
Sbjct: 10 NIVGNPNVGKSTLMNALIGEKLSIITSKAQTTRHRIFGIVNGDDFQVVFSDTPGII-KPA 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + + DE + + K+P+LL+LNK D+
Sbjct: 69 YELQSSMMDFVKSAFEDADVLIYMVEIGEKDLK-DEAFFAKITN--SKVPVLLLLNKIDV 125
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ ++++ W +K + E+ P+SA V+ + + IL LP PA+YPKD +++
Sbjct: 126 SSQEVLEQQVQLWKDKVPNA-EIYPISALQNFNVDTVFNRILELLPESPAFYPKDQITDK 184
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PERFFV E IREKI + Y E+PYA +V + ++ I++ I+VE+++QK I+
Sbjct: 185 PERFFVNETIREKILINYSKEIPYAVEVETEEF---LEDENIIRIRSVIMVERDTQKGII 241
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
IG G ALK + AR D+E F K+V++EI VKV +NWR D+ LK +GY
Sbjct: 242 IGHKGSALKRVGIQARKDLEKFFGKQVHIEIFVKVNKNWRSDQRQLKRFGYN 293
>gi|410729521|ref|ZP_11367598.1| GTP-binding protein Era [Clostridium sp. Maddingley MBC34-26]
gi|410595623|gb|EKQ50324.1| GTP-binding protein Era [Clostridium sp. Maddingley MBC34-26]
Length = 296
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI + K
Sbjct: 8 SIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + + D ++ L + R D+ + E + D K PI LVLNK D
Sbjct: 67 HKLGEYMVNSAKESTKDVDLVLFLTNPDDEIGRGDKFILESLRDKK--CPIFLVLNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+AK LE Y K D E+IP+SA G V+ + + + +P GP YYP D++++
Sbjct: 125 NTQDRVAKTLEMYSKEFDFAEMIPISAIKGKNVDRLVELMKKAMPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K I+IGK
Sbjct: 185 EKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEIGTYHIEVDLICEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + +R ++E FL+ KV L+I VKV++ WR ++ LLK GY
Sbjct: 245 NGQTLKRIGENSRYELEKFLRSKVNLKIWVKVRKEWRDNQLLLKELGY 292
>gi|172056862|ref|YP_001813322.1| GTP-binding protein Era [Exiguobacterium sibiricum 255-15]
gi|171989383|gb|ACB60305.1| GTP-binding protein Era [Exiguobacterium sibiricum 255-15]
Length = 302
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDVQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +++ + + DE + E + D PI+LV+NK DL
Sbjct: 71 HKLGDFMMKVATNALREVDAILFMINVTEPKGKGDEFIIEKLKDLD--TPIILVMNKVDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P +I +E Y+ + V+P+SA G+ VE + I LP GP YYP D +++HP
Sbjct: 129 IHPNDIPPIIESYQNELNFAAVVPISALQGNNVEPLLQEISKILPEGPMYYPADQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
ERF + E+IREK+ + R+EVP++ V + KTR I I++E++SQK I+IG
Sbjct: 189 ERFIISEMIREKVLQKTRDEVPHSIAVAIDQIKTREDGNMVDIHATILIERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + + AR DIE L KVYL + VKV+++WR G L+ G+
Sbjct: 249 KRGALLKEIGSEARTDIEMLLGTKVYLNLWVKVQKDWRNKAGQLRELGF 297
>gi|295132648|ref|YP_003583324.1| GTP-binding protein [Zunongwangia profunda SM-A87]
gi|294980663|gb|ADF51128.1| putative GTP-binding protein [Zunongwangia profunda SM-A87]
Length = 294
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 186/290 (64%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q+IL DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQVILSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+SA +AD +V +V+ + + + + V H + +P+LL+LNK D
Sbjct: 68 YELQESMMDFVKSAFEDADILVYMVEIGERELKDEAFFRKIV--HAE-IPVLLLLNKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ +++ W EK + E+ P+SA G V ++ IL LP PA+YPKD +++
Sbjct: 125 SNQEQLEEQVGLWKEKVPNA-EIYPISALEGFNVSEVFSRILELLPESPAFYPKDSLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV EIIREKI + Y+ E+PYA +++ + + I+VE+++QK I+IG
Sbjct: 184 PERFFVNEIIREKILLHYKKEIPYAVEIDTEEFFEEEKIIRMRSI-IMVERDTQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR D+E F K+V+LE+ VKV +NWR ++ LK +GY
Sbjct: 243 HKGNALKRVGVEARADLEKFFGKQVHLELYVKVNKNWRSNDRQLKRFGYS 292
>gi|159484917|ref|XP_001700498.1| ERA-like protein, small ras-type GTPase [Chlamydomonas reinhardtii]
gi|158272250|gb|EDO98053.1| ERA-like protein, small ras-type GTPase [Chlamydomonas reinhardtii]
Length = 439
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 176/299 (58%), Gaps = 26/299 (8%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P H+S V+GKPN GKSTL N ++GQKLSIVT KPQTTRHR++GI S +YQMIL+DT
Sbjct: 154 PGHRSGYVAVIGKPNAGKSTLINALVGQKLSIVTYKPQTTRHRVMGILSERDYQMILFDT 213
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PG+IEKK L+ MM V + ++ I+ +VD+ P+ + + G G + P+
Sbjct: 214 PGVIEKKRTKLEERMMAAVVHSIKESEAIIAVVDSADKPKEALAMFQPGEG--WNGPPMA 271
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
++LNK DL+ ++ V SA++ G+ +R W +++LP GP Y
Sbjct: 272 VLLNKADLLSEEQV---------------VFVGSAEHKDGLGALRAWAVSRLPEGPTLYS 316
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA---KDFIQVEIVVE 343
K ++ R + E++F+ EVPY QV + + R TA KDFI EIVVE
Sbjct: 317 KPRMTR--TRLKSRAVPAERVFLHCEQEVPYCSQVLIKEFTERRTASGQKDFISAEIVVE 374
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K SQK ILIG GG L+ + AAR +IE FL + VYLE+ V+V ++WR D+ L YGY
Sbjct: 375 KESQKGILIGAGGSMLRRIGGAARKEIETFLGRGVYLELSVQVDKDWRDDKEALSKYGY 433
>gi|403668256|ref|ZP_10933531.1| GTP-binding protein Era [Kurthia sp. JC8E]
Length = 300
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 184/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTMDDSQMIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M K ++A D I+ +V+A + DE + E + K P+ L++NK D
Sbjct: 69 HKLGEFMSKVSKNALREVDAIMFMVNAQQKLGAGDEYVIEML--KGSKTPVFLIINKIDT 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P EI K ++ Y++ D E++P+SA G+ V+++ + + LP GP YYP D V++HP
Sbjct: 127 IHPEEILKIVDQYKEKYDFAEIVPISALQGNNVDNLLNTLKKYLPEGPQYYPADQVTDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IREK R+EVP++ V + + T K + I+VE++SQK I+IG
Sbjct: 187 ERFIISELIREKALHLTRDEVPHSIAVEIEKIRRDEETDKVRVMASIIVERDSQKGIVIG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + T AR DIE+ L KVYLE+ VKV+++WR L+ YGY
Sbjct: 247 KRGAMLKEIGTRARKDIENLLGSKVYLELWVKVQKDWRDRSSQLRDYGY 295
>gi|225010005|ref|ZP_03700477.1| GTP-binding protein Era [Flavobacteria bacterium MS024-3C]
gi|225005484|gb|EEG43434.1| GTP-binding protein Era [Flavobacteria bacterium MS024-3C]
Length = 295
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 188/290 (64%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QMIL DTPGII K
Sbjct: 10 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGII-KPA 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD +V +V+ + + DE+ + + K+P+LL+LNK D+
Sbjct: 69 YELQASMMDFVKSAFEDADILVYMVELGEKTLK-DELFFKKL--QGSKIPVLLLLNKMDI 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + +++ ++++ E+ P+SA + V+++ ++ +P P YYPKD +++ P
Sbjct: 126 SEQSILEEQIAYWQEQLPNAEIHPISALHNFNVKEVFLRLVELMPAAPPYYPKDQLTDKP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI Y+ E+PYA ++ + D I++ I+VE++SQK I+I
Sbjct: 186 ERFFVNETIREKILQHYKKEIPYAVEIETEEFL---EDDDIIRMRAVIMVERDSQKGIII 242
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G ALK + AR D+E F K+V++E+ VKV +NWR + L+ +GY
Sbjct: 243 GHKGAALKRVGMEARKDLEKFFDKQVHIELYVKVNKNWRSNSHQLRRFGY 292
>gi|228476104|ref|ZP_04060812.1| GTP-binding protein Era [Staphylococcus hominis SK119]
gi|314936312|ref|ZP_07843659.1| GTP-binding protein Era [Staphylococcus hominis subsp. hominis C80]
gi|418619982|ref|ZP_13182793.1| GTP-binding protein Era [Staphylococcus hominis VCU122]
gi|228269927|gb|EEK11407.1| GTP-binding protein Era [Staphylococcus hominis SK119]
gi|313654931|gb|EFS18676.1| GTP-binding protein Era [Staphylococcus hominis subsp. hominis C80]
gi|374823545|gb|EHR87540.1| GTP-binding protein Era [Staphylococcus hominis VCU122]
Length = 299
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTREDAQIIFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D E++P+SA G V+ D + LP GP YYP D +S+HP
Sbjct: 127 VHPDALMPKIEKYKTYMDFTEIVPISALEGLNVDHFIDVLKDYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKESEERVRIEATIFVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQMGY 294
>gi|423100546|ref|ZP_17088253.1| ribosome biogenesis GTPase Era [Listeria innocua ATCC 33091]
gi|370792770|gb|EHN60613.1| ribosome biogenesis GTPase Era [Listeria innocua ATCC 33091]
Length = 301
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y + D +E+IP+SA G V ++ + L +GP YYPKD +++HP
Sbjct: 128 ISPEDLIKLIEQYRELMDFEEIIPISALEGSNVPNLLEQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LEI VKV++NWR E L YG+
Sbjct: 248 KQGQMLKQIGMRARKEIESLLGSKVFLEIWVKVQKNWRDKEHYLHDYGF 296
>gi|440748786|ref|ZP_20928037.1| GTP-binding protein Era [Mariniradius saccharolyticus AK6]
gi|436482910|gb|ELP38998.1| GTP-binding protein Era [Mariniradius saccharolyticus AK6]
Length = 296
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 195/299 (65%), Gaps = 11/299 (3%)
Query: 109 SHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 164
S +HK+ ++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + P+YQ++
Sbjct: 2 SQDSHKAGFVNIVGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIINEPDYQIVFS 61
Query: 165 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 224
DTPG+++ K + L MM V + +AD IV + D + I++++++ + D +P
Sbjct: 62 DTPGMLKPK-YELHKSMMGFVHISLEDADVIVFVTDLYETDAEIEDVIKK-IND--SGVP 117
Query: 225 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
+LLV+NK DL K ++ + + ++ + + VIP+SA E I IL +LP+ P +
Sbjct: 118 VLLVINKIDLNKGDKLDEVIAYWTQRLKAEVVIPISATEKFNTEKIMVEILERLPVHPPF 177
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVS-YKTRPTAKDFIQVEIVVE 343
Y KD +++ PERFF EIIREKIF+ Y+ E+PY+ +V + Y+ + I+ I VE
Sbjct: 178 YDKDELTDRPERFFASEIIREKIFLNYKKEIPYSTEVAIEDFYEEEKIIR--IRAIIYVE 235
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ SQK ILIG+GGK LK + +R ++E F KKV+LE VKV+++WR+D+ L+ +GY
Sbjct: 236 RMSQKGILIGEGGKMLKKVGIQSREEMEKFFGKKVFLETFVKVEDDWRKDKNKLRKFGY 294
>gi|149371535|ref|ZP_01890951.1| putative GTP-binding protein [unidentified eubacterium SCB49]
gi|149355162|gb|EDM43722.1| putative GTP-binding protein [unidentified eubacterium SCB49]
Length = 293
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 188/292 (64%), Gaps = 9/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QM+L DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMLLSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ LV+ + + DE + + + K+P+LL+LNK D
Sbjct: 68 YELQASMMDFVKSAFEDADVLLYLVELGEKDLK-DEKFFDKITNA--KIPVLLLLNKIDQ 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + L +++ V +SA GV+++ + I+ LP P +YPKD +++ P
Sbjct: 125 GNEEQLGEALTFWQAKVPNATVFAISALENFGVQEVFNHIIELLPESPPFYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV EIIREKI M Y+ E+PY+ +++ + ++ I++ I+VE+N+QK I+I
Sbjct: 185 ERFFVNEIIREKILMHYKKEIPYSVEIDTEEFF---EDENIIRIRSIIMVERNTQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
G G ALK + AR D+E F K+++LE VKV +NWR ++ L+ +GY
Sbjct: 242 GHKGAALKRVGVEARKDLEKFFGKQIHLETYVKVNKNWRSNDRQLRRFGYNN 293
>gi|86140695|ref|ZP_01059254.1| putative GTP-binding protein [Leeuwenhoekiella blandensis MED217]
gi|85832637|gb|EAQ51086.1| putative GTP-binding protein [Leeuwenhoekiella blandensis MED217]
Length = 309
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 183/294 (62%), Gaps = 11/294 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q I DTPGII K
Sbjct: 24 NIIGNPNVGKSTLMNAIVGERLSIITSKAQTTRHRILGIVNGDDFQAIFSDTPGII-KPA 82
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + E DE + +P+LL++NK D
Sbjct: 83 YELQASMMDFVKSAFEDADVLIYMVELGEK-ELKDEDFFNKI--RNTDIPVLLLINKID- 138
Query: 235 IKPGE---IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
K E A + W EK + E+ +SA GV + D IL LP+ P +YPKD ++
Sbjct: 139 -KGNEELLEASRTHWQEKVPNA-EIFAISALEDFGVSQVFDRILDALPVSPPFYPKDALT 196
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ PERFFV EIIREKI M Y+ EVPY+ +++ + + I+VE++SQK I+
Sbjct: 197 DKPERFFVNEIIREKILMHYKKEVPYSVEIDTEEFVEEENIIRMRSI-IMVERDSQKGII 255
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
IG G ALK + AR D+E F K+V+LE+ VKV ++WR E L+ +GY G+
Sbjct: 256 IGHKGAALKRIGVEARKDLEIFFGKQVHLELYVKVNKDWRSSERELRRFGYNGK 309
>gi|365157904|ref|ZP_09354149.1| GTPase Era [Bacillus smithii 7_3_47FAA]
gi|363622574|gb|EHL73733.1| GTPase Era [Bacillus smithii 7_3_47FAA]
Length = 304
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 183/290 (63%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+RI G+ + + QMI DTPGI + K
Sbjct: 14 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNRIQGVYTTDDAQMIFIDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K +A D I+ +V+ + R ++ + E + D + P+ LVLNK D
Sbjct: 73 HKLGDFMVKTAVNALKEVDLILFMVNVTEGLGRGEQYIIEMLKDIQT--PVFLVLNKIDQ 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ +E Y++ E+ P+SA G+ V+ + I LP GP YYP D V++HP
Sbjct: 131 IHPDELFPMIEQYKELYPFQEIFPISALNGNNVDRLLSAIKEYLPEGPQYYPADQVTDHP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF V E+IREK+ R EVP++ V ++ R KD + + I+VE++SQK I+I
Sbjct: 191 ERFIVSELIREKVLHLTREEVPHSIAV-LIDKMEREEEKDLVHIMATIIVERDSQKGIII 249
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G+ LK + AR+DIE+ L KV+LE+ VKV+++WR L+ YG+
Sbjct: 250 GKQGRMLKEVGKRARMDIENLLGSKVFLELWVKVQKDWRDKISALREYGF 299
>gi|417643133|ref|ZP_12293195.1| ribosome biogenesis GTPase Era [Staphylococcus warneri VCU121]
gi|330686118|gb|EGG97739.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU121]
Length = 299
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I GI + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGIMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK + D I+ +V+ + R DE + + + D K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDLK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+++ + E++P+SA G V+ D + + LP GP YYP D +S+HP
Sbjct: 127 VHPDALMPKIEKYQEYMNFTEIVPISALEGLNVDHFIDVLKSYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARHDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQIGY 294
>gi|392972237|ref|ZP_10337629.1| GTP-binding protein Era [Staphylococcus equorum subsp. equorum Mu2]
gi|403046438|ref|ZP_10901907.1| GTP-binding protein Era [Staphylococcus sp. OJ82]
gi|392509950|emb|CCI60932.1| GTP-binding protein Era [Staphylococcus equorum subsp. equorum Mu2]
gi|402763134|gb|EJX17227.1| GTP-binding protein Era [Staphylococcus sp. OJ82]
Length = 299
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ + D I+ +V+ + R DE + + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDML--KTIKTPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++E Y+K+ D E++P+SA G V+ + I + LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPRIEKYKKYMDFTEIVPISALEGLNVDHFINVIKSYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGE+IREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGELIREKILHLTSEEIPHAIGVNVDRMVKEDEDRVRIEATIFVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARQDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQMGY 294
>gi|418005222|ref|ZP_12645218.1| GTP-binding protein [Lactobacillus casei UW1]
gi|410547475|gb|EKQ21708.1| GTP-binding protein [Lactobacillus casei UW1]
Length = 300
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 188/300 (62%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDK 222
+ K + LD+ M K S D I+ +V+A DE E+G GD + K
Sbjct: 65 HKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L++NK DL+KP ++ +E Y+ D+V P+SA G+ V+++ + LP+GP
Sbjct: 115 KPVYLIINKIDLVKPDDLLPLIESYQHDYAFDQVFPISATMGNNVDELLTALTDALPVGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARHDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|320353093|ref|YP_004194432.1| GTP-binding protein Era [Desulfobulbus propionicus DSM 2032]
gi|320121595|gb|ADW17141.1| GTP-binding protein Era [Desulfobulbus propionicus DSM 2032]
Length = 299
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 179/292 (61%), Gaps = 7/292 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PN GKSTL N ++GQK++IVT KPQTTR+RI+GI +G YQMIL DTPG+ +
Sbjct: 12 AIIGPPNAGKSTLLNHLLGQKIAIVTPKPQTTRNRIMGIVTGTSYQMILLDTPGLHAARE 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
M M+ + S AD I+ LVD E+ E E + +K+ P++L LNK
Sbjct: 72 EMNRQMVRVALESLA-EADVILFLVDGADWAEKKREQRAEEFQGYLEKMTCPVVLALNKV 130
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DL+ ++ ++WY + ++P+SA G G++ + D ++ +LP+GP YYP+DI ++
Sbjct: 131 DLLPSAQLLPVMDWYRRLYPFAAMVPISALRGTGIDTLTDELVARLPVGPQYYPEDIPTD 190
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIIL 351
ERF EIIREKIF+ R+EVPY+ V + S+ + P IQ I+VE++SQK IL
Sbjct: 191 ASERFIAAEIIREKIFLLTRDEVPYSTAVIIDSFEEGEPV---VIQATILVERSSQKGIL 247
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+G+ G L + +A +IE L +V L + +KV++NW + +L+ G G
Sbjct: 248 VGQKGSMLAAIRKSATREIEQLLGCRVRLHLWIKVRKNWTGNPAILRELGLG 299
>gi|213961788|ref|ZP_03390054.1| GTP-binding protein Era [Capnocytophaga sputigena Capno]
gi|213955577|gb|EEB66893.1| GTP-binding protein Era [Capnocytophaga sputigena Capno]
Length = 293
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 186/288 (64%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGII-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + E DE+ + +K ++P+LL++NK D
Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEK-ELKDEVFFNRI--NKLEVPVLLLINKVDT 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +++ ++++ E+ P+SA E + + I+ LP PA++PKD +++ P
Sbjct: 124 SDQSTLEEQVAYWKEKVPRAEIFPISALRNFQTEVVFNRIIELLPESPAFFPKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ SQK I+IG
Sbjct: 184 ERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERESQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ALK + AR D+E F K+++LE+ VKV ++WR + L+ +GY
Sbjct: 243 KGEALKRVGVEARTDLEKFFGKQIHLELFVKVNKDWRSNVRQLRRFGY 290
>gi|217964392|ref|YP_002350070.1| GTP-binding protein Era [Listeria monocytogenes HCC23]
gi|290894223|ref|ZP_06557192.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-071]
gi|386008233|ref|YP_005926511.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L99]
gi|386026834|ref|YP_005947610.1| putative GTP binding protein Era [Listeria monocytogenes M7]
gi|404407900|ref|YP_006690615.1| GTP-binding protein [Listeria monocytogenes SLCC2376]
gi|422809543|ref|ZP_16857954.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-208]
gi|254783659|sp|B8DE49.1|ERA_LISMH RecName: Full=GTPase Era
gi|217333662|gb|ACK39456.1| GTP-binding protein Era [Listeria monocytogenes HCC23]
gi|290556220|gb|EFD89765.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-071]
gi|307571043|emb|CAR84222.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L99]
gi|336023415|gb|AEH92552.1| putative GTP binding protein Era [Listeria monocytogenes M7]
gi|378753157|gb|EHY63742.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-208]
gi|404242049|emb|CBY63449.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2376]
Length = 301
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ K +E Y + DE+IP+SA G+ V ++ + L +GP YYPKD +++HP
Sbjct: 128 IAPEDLFKLIEQYRDLMEFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE L KV+LE+ VKV++NWR E L+ YG+
Sbjct: 248 KQGQMLKQIGMRARKEIERLLGSKVFLEVWVKVQKNWRDKEHYLQDYGF 296
>gi|163754016|ref|ZP_02161139.1| putative GTP-binding protein [Kordia algicida OT-1]
gi|161326230|gb|EDP97556.1| putative GTP-binding protein [Kordia algicida OT-1]
Length = 294
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 186/293 (63%), Gaps = 9/293 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QMIL DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + + + ++ + K+P++L+LNK D
Sbjct: 68 YELQSSMMDFVKSAFEDADVLIYMVEIGEKSLKDEAFFKKIINS---KIPVILLLNKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +++E +++ E+ P+SA V + I+ LP PA+YPKD +++ P
Sbjct: 125 SSQEQLEEQMELWKEKVPTAEIYPISALENFNVPQVFSRIIELLPESPAFYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI M Y+ E+PYA + V + ++ I++ I+VE+ +QK I+I
Sbjct: 185 ERFFVNETIREKILMNYKKEIPYAVE---VETEEFFEEENIIRIRSVIMVERETQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G G ALK + AR D+E F K++++E+ VKV +NWR + LK +GY +
Sbjct: 242 GHKGNALKTVGIQARKDLEKFFGKQIHIELYVKVNKNWRSNAKQLKRFGYNNK 294
>gi|392949010|ref|ZP_10314609.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus pentosus
KCA1]
gi|334880401|emb|CCB81131.1| GTP-binding protein era homolog [Lactobacillus pentosus MP-10]
gi|339638996|emb|CCC18202.1| GTPase Era [Lactobacillus pentosus IG1]
gi|392435829|gb|EIW13754.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus pentosus
KCA1]
Length = 302
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 185/302 (61%), Gaps = 17/302 (5%)
Query: 108 ASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
A H +++G+PNVGKSTL N+++GQK++I+++K QTTR+RI GI + + QM+ DTP
Sbjct: 6 AFHSGFVAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTP 65
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL-- 223
GI K L M+K+ S D ++ +++A DE G GD+ D+L
Sbjct: 66 GI-HKPHSRLGDFMVKSALSTLGEVDAVLFMINA-------DE--RRGAGDNFIIDRLKN 115
Query: 224 ---PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
PI LV+NK D + P + + ++ Y+ EV P+SA G+ V+++ + +LP
Sbjct: 116 VKQPIYLVINKIDQVHPDHLLEIMDQYKDALPWKEVYPISALEGNNVDELLATLKKQLPE 175
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP YYP D V++HPERF + E+IREK+ R EVP++ V + S K + K +Q I
Sbjct: 176 GPQYYPSDQVTDHPERFIISELIREKVLELTRQEVPHSTAVVIDSIKRQDEEKIHVQATI 235
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
++E++SQK I+IGKGG LK + + AR DIE L KVYLE+ VKV+ENW+ + LL Y
Sbjct: 236 IIERSSQKGIIIGKGGSMLKKIGSMARRDIEHLLGDKVYLELWVKVQENWKDRQDLLASY 295
Query: 401 GY 402
GY
Sbjct: 296 GY 297
>gi|308180766|ref|YP_003924894.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046257|gb|ADN98800.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 302
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 185/302 (61%), Gaps = 17/302 (5%)
Query: 108 ASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
A H +++G+PNVGKSTL N+++GQK++I+++K QTTR+RI GI + + QM+ DTP
Sbjct: 6 AFHSGFVAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTP 65
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL-- 223
GI K L M+K+ S D ++ +++A DE G GD+ D+L
Sbjct: 66 GI-HKPHSRLGDFMVKSALSTLGEVDAVLFMINA-------DE--RRGAGDNFIIDRLKT 115
Query: 224 ---PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
PI LV+NK D + P + + ++ Y+ EV P+SA G+ V+++ + +LP
Sbjct: 116 VKQPIYLVINKIDQVHPNHLLEIMDQYKDALPWKEVYPISALEGNNVDELLTTLKGQLPE 175
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP YYP D +++HPERF + E+IREK+ R EVP++ V + S K + K +Q I
Sbjct: 176 GPQYYPSDQITDHPERFIISELIREKVLELTRQEVPHSTAVVIDSIKRQDEEKIHVQATI 235
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
++E++SQK I+IGKGG LK + + AR DIE L KVYLE+ VKV+ENW+ + LL Y
Sbjct: 236 IIERSSQKGIIIGKGGSMLKKIGSLARRDIEHLLGDKVYLELWVKVQENWKDRQDLLASY 295
Query: 401 GY 402
GY
Sbjct: 296 GY 297
>gi|161760697|ref|YP_253264.2| GTP-binding protein Era [Staphylococcus haemolyticus JCSC1435]
gi|317374941|sp|Q4L6R7.2|ERA_STAHJ RecName: Full=GTPase Era
Length = 299
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRNDAQIIFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEEIGRGDEYIMEMLKN--VKTPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++E Y+K+ + E++P+SA G V+ D + T LP GP YYP D +S+HP
Sbjct: 127 VHPDALMPRIEQYQKYMNFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + ++ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKENDERVRVEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARHDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQMGY 294
>gi|445059533|ref|YP_007384937.1| GTPase Era [Staphylococcus warneri SG1]
gi|443425590|gb|AGC90493.1| GTPase Era [Staphylococcus warneri SG1]
Length = 299
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK + D I+ +V+ + R DE + + + D K P+ LVLNK DL
Sbjct: 69 HKLGDYMMKVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDLK--TPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+++ + E++P+SA G V+ D + + LP GP YYP D +S+HP
Sbjct: 127 VHPDALMPKIEKYQEYMNFTEIVPISALEGLNVDHFIDVLKSYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGEIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARHDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQIGY 294
>gi|223044391|ref|ZP_03614425.1| GTP-binding protein Era [Staphylococcus capitis SK14]
gi|314933739|ref|ZP_07841104.1| GTP-binding protein Era [Staphylococcus caprae C87]
gi|417907958|ref|ZP_12551725.1| ribosome biogenesis GTPase Era [Staphylococcus capitis VCU116]
gi|222442260|gb|EEE48371.1| GTP-binding protein Era [Staphylococcus capitis SK14]
gi|313653889|gb|EFS17646.1| GTP-binding protein Era [Staphylococcus caprae C87]
gi|341595045|gb|EGS37723.1| ribosome biogenesis GTPase Era [Staphylococcus capitis VCU116]
Length = 300
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 11 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 70 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++E Y+++ D E+IP+SA G V+ D + + LP+GP YYP D +S+HP
Sbjct: 128 VHPDALMPRIEKYKEYMDFTEIIPISALEGLNVDHFIDVLKSYLPVGPKYYPDDQISDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + ++ I VE++SQK I+IGK
Sbjct: 188 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRVEATIYVERDSQKGIVIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 248 GGKKLKEVGKRARHDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 295
>gi|227510288|ref|ZP_03940337.1| GTP-binding protein Era [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227524439|ref|ZP_03954488.1| GTP-binding protein Era [Lactobacillus hilgardii ATCC 8290]
gi|227088398|gb|EEI23710.1| GTP-binding protein Era [Lactobacillus hilgardii ATCC 8290]
gi|227189940|gb|EEI70007.1| GTP-binding protein Era [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 300
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 185/298 (62%), Gaps = 10/298 (3%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN++S ++G+PNVGKST N+++GQK++I+++K QTTR++I G+ + E Q++ D
Sbjct: 3 NPNYRSGFVAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDEAQVVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-HKDKLP 224
TPGI K + L MM + SA D ++ +V+A + D + + + D HK P
Sbjct: 63 TPGI-HKPQNKLGDFMMDSALSALKEVDAVLFMVNATERRGAGDNFIIDRLKDVHK---P 118
Query: 225 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
I L++NK D I P ++ +E Y+ EV P+SA G+ V ++ ++ +LP GP Y
Sbjct: 119 IYLLINKIDEITPDDVMAIIEQYKNALSFKEVFPISALQGNNVPELLTSLIKELPNGPQY 178
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 344
YPKD V++HPERF + E+IREK+ R E+P++ V + S K + IQ I+VE+
Sbjct: 179 YPKDQVTDHPERFVISELIREKVLQMTRQEIPHSTAVYIESIKKQDEVL-HIQATIIVER 237
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ QK I+IGKGG LK + T AR DIE+ + KVYLE+ VKV+ +WR LL YGY
Sbjct: 238 DGQKGIVIGKGGSMLKKIGTLARKDIENMMGNKVYLELWVKVEAHWRDKANLLNSYGY 295
>gi|311745512|ref|ZP_07719297.1| GTP-binding protein Era [Algoriphagus sp. PR1]
gi|126578067|gb|EAZ82287.1| GTP-binding protein Era [Algoriphagus sp. PR1]
Length = 297
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 184/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N ++G++LSI+++K QTTRHRILG+ + YQ++ DTPG+++ +
Sbjct: 12 NIIGKPNVGKSTLMNILVGERLSIISSKAQTTRHRILGLTNTENYQIVFSDTPGMLKPQ- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V + +AD ++ + D + E I EI+++ ++ +PI+L +NK DL
Sbjct: 71 YELHKNMMSFVNISLEDADVVLFVTDLYETDEEIVEIIDK---INQSGIPIILAINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
K G++ K E++ D VIP+SA + + IL +LP P +Y K+ +++
Sbjct: 128 AKEGQLEKVTEYWTSRIKADVVIPISAGEEFNTDKVLQEILERLPEHPPFYDKEELTDRS 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFF EIIREKIF Y+ EVPY+ +VNV + + I+ I VE++SQK I+IG
Sbjct: 188 ERFFASEIIREKIFNNYKKEVPYSTEVNVEDFHVKNKIIR-IRATIYVERDSQKGIIIGD 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK + AR ++E F K+V+LE VKV+ NWR+++ LK +GY
Sbjct: 247 KGKALKKVGIEAREELEKFFGKQVFLETFVKVEANWRKNKSKLKKFGY 294
>gi|336172729|ref|YP_004579867.1| GTP-binding protein Era-like-protein [Lacinutrix sp. 5H-3-7-4]
gi|334727301|gb|AEH01439.1| GTP-binding protein Era-like-protein [Lacinutrix sp. 5H-3-7-4]
Length = 293
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 187/291 (64%), Gaps = 9/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G +Q++L DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGENFQVVLSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + E DE + + K +P+LL+LNK D
Sbjct: 68 YELQASMMDFVKSAFDDADLLIYMVEIGEK-ELKDEAFFNKITNAK--IPVLLLLNKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++++ + E+I +SA G V+++ D I+ LP P +YPKD +++ P
Sbjct: 125 SNQVQLEEQVQLWATKVPNAEIIAISALEGFNVKEVFDRIIELLPESPPFYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFF+ E IREKI M Y+ E+PYA +++ + ++ I+V I+VE+ +QK I+I
Sbjct: 185 ERFFINETIREKILMHYKKEIPYAVEIDTEEFF---EEEEIIRVRSVIMVERETQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G ALK + AR D+E F K+++LE+ VKV +NWR ++ LK +GY
Sbjct: 242 GHKGSALKRVGVEARKDLETFFGKQIHLELYVKVNKNWRSNQRQLKRFGYN 292
>gi|359411019|ref|ZP_09203484.1| GTP-binding protein Era-like-protein [Clostridium sp. DL-VIII]
gi|357169903|gb|EHI98077.1| GTP-binding protein Era-like-protein [Clostridium sp. DL-VIII]
Length = 296
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 181/291 (62%), Gaps = 3/291 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQM+ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + + D ++ L + + R D+ + E + D K PI LVLNK D
Sbjct: 67 HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGRGDKFILETLKDKK--CPIFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+AK LE Y K + E+IP+SA G V+ + D + +P GP YYP D++++
Sbjct: 125 NTQDRVAKSLEMYAKEFNFAEIIPISAVKGKNVDKLVDLMKNVMPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K I+IGK
Sbjct: 185 EKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEKGTYHIEVDLICEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G+ LK + +R ++E FL+ KV L+I VKV++ WR ++ LLK GY +
Sbjct: 245 NGQTLKRIGETSRYELERFLRCKVNLKIWVKVRKEWRDNQLLLKELGYKAK 295
>gi|395803315|ref|ZP_10482562.1| GTPase Era [Flavobacterium sp. F52]
gi|395434361|gb|EJG00308.1| GTPase Era [Flavobacterium sp. F52]
Length = 293
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 187/291 (64%), Gaps = 9/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++L DTPGII+
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQLVLSDTPGIIKPAY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M +S MM V+SA +AD ++ +V+ + + ++ ++ + K+P+LL+LNK D
Sbjct: 69 EMQES-MMNFVKSAFEDADILIYMVEIGEQDLKDEDFFKKII---HAKIPVLLLLNKIDN 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +++ ++++ E+ P+SA V ++ I+ LP P YYPKD +++ P
Sbjct: 125 SNQEQLEQQVAFWKEKVPNAEIFPISALQNFNVPEVFGRIIELLPESPPYYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI + Y E+PYA ++ + + I++ I+VE+++QK I+I
Sbjct: 185 ERFFVNETIREKILLNYAKEIPYAVEIVTEEFH---ETDNIIRIRSVIMVERDTQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G ALK + T AR D+E F K++++E+ VKV +NWR + +LK +GY
Sbjct: 242 GHKGAALKKVGTDARADLEKFFGKQIHIELYVKVNKNWRSNANMLKRFGYN 292
>gi|254556825|ref|YP_003063242.1| GTP-binding protein Era [Lactobacillus plantarum JDM1]
gi|300768138|ref|ZP_07078043.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|380032744|ref|YP_004889735.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
WCFS1]
gi|418275504|ref|ZP_12890827.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821472|ref|YP_007414634.1| GTPase Era [Lactobacillus plantarum ZJ316]
gi|38257324|sp|Q88VS0.1|ERA_LACPL RecName: Full=GTPase Era
gi|254045752|gb|ACT62545.1| GTP-binding protein Era [Lactobacillus plantarum JDM1]
gi|300494202|gb|EFK29365.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|342241987|emb|CCC79221.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
WCFS1]
gi|376009055|gb|EHS82384.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274969|gb|AGE39488.1| GTPase Era [Lactobacillus plantarum ZJ316]
Length = 302
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 185/302 (61%), Gaps = 17/302 (5%)
Query: 108 ASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
A H +++G+PNVGKSTL N+++GQK++I+++K QTTR+RI GI + + QM+ DTP
Sbjct: 6 AFHSGFVAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTP 65
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL-- 223
GI K L M+K+ S D ++ +++A DE G GD+ D+L
Sbjct: 66 GI-HKPHSRLGDFMVKSALSTLGEVDAVLFMINA-------DE--RRGAGDNFIIDRLKT 115
Query: 224 ---PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
PI LV+NK D + P + + ++ Y+ EV P+SA G+ V+++ + +LP
Sbjct: 116 VKQPIYLVINKIDQVHPDHLLEIMDQYKDALPWKEVYPISALEGNNVDELLTTLKGQLPE 175
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP YYP D +++HPERF + E+IREK+ R EVP++ V + S K + K +Q I
Sbjct: 176 GPQYYPSDQITDHPERFIISELIREKVLELTRQEVPHSTAVVIDSIKRQDEEKIHVQATI 235
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
++E++SQK I+IGKGG LK + + AR DIE L KVYLE+ VKV+ENW+ + LL Y
Sbjct: 236 IIERSSQKGIIIGKGGSMLKKIGSLARRDIEHLLGDKVYLELWVKVQENWKDRQDLLASY 295
Query: 401 GY 402
GY
Sbjct: 296 GY 297
>gi|184155316|ref|YP_001843656.1| GTP-binding protein [Lactobacillus fermentum IFO 3956]
gi|227514585|ref|ZP_03944634.1| GTP-binding protein Era [Lactobacillus fermentum ATCC 14931]
gi|260662170|ref|ZP_05863066.1| GTP-binding protein Era [Lactobacillus fermentum 28-3-CHN]
gi|183226660|dbj|BAG27176.1| GTP-binding protein [Lactobacillus fermentum IFO 3956]
gi|227086996|gb|EEI22308.1| GTP-binding protein Era [Lactobacillus fermentum ATCC 14931]
gi|260553553|gb|EEX26445.1| GTP-binding protein Era [Lactobacillus fermentum 28-3-CHN]
Length = 301
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 181/297 (60%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL N M+GQK++I++N QTTR++I GI + E Q++ D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNYMVGQKVAIMSNVAQTTRNKIQGIYTSDEAQIVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI + + + D M ++ SA D I+ +V A + D + E + K + PI
Sbjct: 63 TPGIHKPQTRLGD-FMERSALSALDEVDAILFVVPANEKRGAGDNFIIERL--KKVQQPI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D + P ++ + YE +V+PVSA G+ V + + ++ +LP GP YY
Sbjct: 120 YLVVNKIDQVNPNDLPDIIAQYEGALPFKKVVPVSALQGNNVNTLINDLVDQLPTGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D VS+HPERF + E+IREK+F+ R EVP++ ++V S + + I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLNTREEVPHSVAIDVTSIQREDDETIHVSANIIVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGG LK + TAAR DI+ L KV+L++ VKV WR +LK YGY
Sbjct: 240 GQKGIIIGKGGSMLKKIGTAARQDIQALLGDKVFLQLWVKVVPGWRDKSAMLKDYGY 296
>gi|323703320|ref|ZP_08114970.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574]
gi|333924043|ref|YP_004497623.1| GTP-binding protein Era-like-protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531683|gb|EGB21572.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574]
gi|333749604|gb|AEF94711.1| GTP-binding protein Era-like-protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 302
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++KPQTTRH+I + S + Q++ DTPGI K
Sbjct: 14 ALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLSRNDAQIVFLDTPGI-HKPR 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ A D ++ LV+A P D + E + + K P+ L++NK DL
Sbjct: 73 HKLGEYMVDVALGALKEVDVVLFLVEATGPPGAGDRYIAEQLKEIKT--PVFLLINKVDL 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K E+ +++ Y+ D EV+PVSA G V+ + D I+ LP GP YYP D+V++ P
Sbjct: 131 VKKEEVLERIVSYKDLLDFAEVVPVSALAGENVDRLVDTIVQYLPEGPQYYPADMVTDRP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + EIIREK+ EVP++ V V + R + I E+ SQK ILIGK
Sbjct: 191 ERFIMAEIIREKVLHLTSEEVPHSVAVVVEQIQARSNGVVAVHAVIYTERESQKAILIGK 250
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + AR +IE+ L KVYLE+ VKVK++WR L+++G+
Sbjct: 251 GGNMLKEVGRRARQEIENLLGSKVYLELWVKVKKDWRNKMADLRNFGF 298
>gi|402494831|ref|ZP_10841567.1| GTPase Era [Aquimarina agarilytica ZC1]
Length = 295
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 186/296 (62%), Gaps = 11/296 (3%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
NHK+ ++G PNVGKSTL N +IG+KLSI+T+K QTTRHRILGI + +Q+I DTP
Sbjct: 3 NHKAGFVNIIGNPNVGKSTLMNALIGEKLSIITSKAQTTRHRILGIVNSDTFQVIFSDTP 62
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
GII K + L MM V+SA +AD ++ +V+ + E DE + + K+P+LL
Sbjct: 63 GII-KPAYELQQSMMDFVKSAFEDADVLIYMVEIGEK-ELKDEQFFNRI--NSSKIPVLL 118
Query: 228 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
++NK D + +++ W EK + E++P+SA ++ + D I+ LP PA+YP
Sbjct: 119 LINKIDKSNQDILEEQVTYWTEKVPNA-EILPISALEKFNIQTVFDRIVALLPFSPAFYP 177
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
KD +++ PERFFV E IREKI + Y+ E+PYA +V S++ I I+VE+ +
Sbjct: 178 KDQLTDKPERFFVNEAIREKILLHYKKEIPYAVEVVTESFEEDEKIIR-INAVIMVERET 236
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IG G A+K + AR D+E F K++++E+ VKV +NWR ++ LK +GY
Sbjct: 237 QKGIIIGHKGSAIKRVGQEARQDLEKFFGKQIHIELFVKVNKNWRSNQNQLKRFGY 292
>gi|37222111|gb|AAP49305.1| Uvs062 [uncultured bacterium]
Length = 304
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 185/297 (62%), Gaps = 21/297 (7%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++L DTPGII+
Sbjct: 20 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQLVLSDTPGIIKPAY 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M +S MM V+SA +AD ++ +V+ + + + + + K+P+LL+LNK D
Sbjct: 80 EMQES-MMNFVKSAFEDADILIYMVEIGEQDLKDEAFFNKII---HAKIPVLLLLNKIDN 135
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +++ ++++ E+ P+SA V ++ I+ LP PAYYPKD +++ P
Sbjct: 136 SNQEQLEEQVAFWKEKVPNAEIFPISALQNFNVPEVFGRIIELLPESPAYYPKDQLTDKP 195
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--------IVVEKNS 346
ERFFV E IREKI + Y E+PYA ++ ++F + E I+VE+ +
Sbjct: 196 ERFFVNETIREKILLNYSKEIPYAVEI---------VTEEFFEDEKIIRIRSIIMVERET 246
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
QK I+IG G ALK + T AR D+E F K++++E+ VKV +NWR + +LK +GY
Sbjct: 247 QKGIIIGHKGAALKKVGTDARADLEKFFGKQIHIELVVKVNKNWRSNANMLKRFGYN 303
>gi|345866473|ref|ZP_08818500.1| GTP-binding protein Era [Bizionia argentinensis JUB59]
gi|344049051|gb|EGV44648.1| GTP-binding protein Era [Bizionia argentinensis JUB59]
Length = 293
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 187/292 (64%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QM+L DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMVLSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+SA +AD ++ +V+ + E DE + + K+P+LL+LNK D
Sbjct: 68 YELQESMMDFVKSAFDDADVLIYMVEIGEK-ELKDEAFFNRITN--SKIPVLLLLNKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ ++++ W K + E+ +SA G V+++ + I+ LP P +YPKD +++
Sbjct: 125 SDQEQLEEQVQSWAVKVPNA-EIFAISALEGFQVKEVFERIVELLPDSPPFYPKDQLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PERFFV E IREKI + Y+ E+PYA +++ + D I++ I+VE+ +QK I+
Sbjct: 184 PERFFVNETIREKILIHYKKEIPYAVEIDTEEFFEE---DDIIRMRAVIMVERETQKGII 240
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
IG G ALK + AR D+E F K+V+LE+ VKV +NWR D+ LK +GY
Sbjct: 241 IGHKGSALKRVGMEARKDLEKFFGKQVHLELYVKVNKNWRSDQRQLKRFGYN 292
>gi|333384114|ref|ZP_08475757.1| GTP-binding protein Era [Dysgonomonas gadei ATCC BAA-286]
gi|332826860|gb|EGJ99660.1| GTP-binding protein Era [Dysgonomonas gadei ATCC BAA-286]
Length = 293
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 187/296 (63%), Gaps = 13/296 (4%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G+K+SI+T+K QTTRHRILGI + +YQ++ DTPG
Sbjct: 2 HKSGFVNIVGNPNVGKSTLMNLLVGEKVSIITSKAQTTRHRILGIVNTDDYQIVYSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + +SM+ +V SA +AD ++ + D + ++ +E L++ P+LL+
Sbjct: 62 VLRPNYKLQESMLNFSV-SALSDADVLLYMTDVIEKTDKNEEFLQKV---QNVDAPVLLL 117
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D E+ K + +++ E+ P+SA V+ ++ IL +P P Y+ KD
Sbjct: 118 INKIDQTNQQELEKLVAQWKELLPKAEIYPISALNKFNVDTVKKRILDLIPESPPYFEKD 177
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 346
+++ P RFFV EIIREKI + Y+ EVPYA +V V +K K+ I + I+ E+++
Sbjct: 178 ALTDRPARFFVTEIIREKILLYYQKEVPYAVEVIVEEFKDE---KEIINIRALIIAERDT 234
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IG G ALK +AT AR D+E F KK++LEI VKV+++WR + LL+ YGY
Sbjct: 235 QKGIIIGHKGAALKKVATMARKDMERFFNKKIFLEIYVKVEKDWRSRDNLLRQYGY 290
>gi|228472569|ref|ZP_04057329.1| GTP-binding protein Era [Capnocytophaga gingivalis ATCC 33624]
gi|228275982|gb|EEK14738.1| GTP-binding protein Era [Capnocytophaga gingivalis ATCC 33624]
Length = 293
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 185/292 (63%), Gaps = 9/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLLNALVGERLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+ A +AD ++ +V+ + + + + ++ K+P+L+++NK D
Sbjct: 68 YQLQNSMMDFVKDAFEDADILIYMVEIGEKELKDADFFRK---INQAKVPVLVLINKIDR 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + + ++++ E+ +SA V + IL LP+ PA+YPKD +++ P
Sbjct: 125 SDEETVKQAVAYWQQQVPKGEIYAISALENFNVAPLFHRILELLPVSPAFYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI + Y+ EVPYA +V +T + I++ I+VE++SQK I+I
Sbjct: 185 ERFFVNETIREKILLNYKKEVPYAVEVET---ETFSETDEIIRIRSIIMVERDSQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
G G+ALK + T AR D+E F K+++LE+ VKV +NWR D G L+ +GY
Sbjct: 242 GHRGEALKRVGTQARYDLEKFFGKQIHLELYVKVNKNWRSDLGQLRRFGYSN 293
>gi|189500921|ref|YP_001960391.1| GTP-binding protein Era [Chlorobium phaeobacteroides BS1]
gi|189496362|gb|ACE04910.1| GTP-binding protein Era [Chlorobium phaeobacteroides BS1]
Length = 306
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 8/295 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PN GKSTL N+++ KLSIVT KPQTTR +I GI Q++ DTPGI+ K +
Sbjct: 13 AIIGPPNAGKSTLLNRLLNHKLSIVTPKPQTTRKKITGIYHSDRCQILFLDTPGIM-KPM 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH---KDKLPILLVLNK 231
L M+ RS AD I+ ++ A K D+ E + P++ LNK
Sbjct: 72 QELHQSMLTATRSTLKEADVIITMIPASKKNGLFDQDFTELLFREWLTNTGKPVIAALNK 131
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + GE + L ++ + ++ + VSA G G +D+ + ++ LP YP+DI+S
Sbjct: 132 SDFLNAGEQEEALRIIKERWNPEKALAVSALKGSGTDDLIEALIPLLPASAPLYPEDILS 191
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIVVEKNSQ 347
PERFFV EIIREKIF+ Y E+PY+ +V V +K + + KD I+ IVVE+++Q
Sbjct: 192 TAPERFFVSEIIREKIFLFYGQEIPYSTEVVVDEFKEQHENDSSRKDLIRCSIVVERDTQ 251
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIGK G ALK L AAR +IE+FL + V+LE+ VKV+ +WR+ +G+L+ +GY
Sbjct: 252 KHILIGKKGSALKKLGMAARTEIEEFLGRPVFLELFVKVRPDWRKKKGMLRSFGY 306
>gi|415885555|ref|ZP_11547483.1| GTP-binding protein Era [Bacillus methanolicus MGA3]
gi|387591224|gb|EIJ83543.1| GTP-binding protein Era [Bacillus methanolicus MGA3]
Length = 306
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 183/290 (63%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 16 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVLTLHDSQLIFIDTPGIHKPK- 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +V+A + R +E + E + K P+ LV+NK D
Sbjct: 75 HKLGDFMMKVAINALKEVDLILFMVNAEEGFGRGEEFIIEKF--QQIKTPVFLVINKIDK 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ +E Y++ E+IP+SA G+ VE + + I LP GP YYP D V++HP
Sbjct: 133 IHPDELLPLIESYKEKYSFSEIIPISALQGNNVEALLEQIKKYLPEGPQYYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF V E+IREK R EVP++ V V+ R D I V ++VE++SQK I+I
Sbjct: 193 ERFIVSELIREKALHLTREEVPHSLAV-VIDKMERREESDVIHVMATVIVERDSQKGIII 251
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK GK LK + AR+DIE+ L KV+LE+ VKV+++WR L+ YG+
Sbjct: 252 GKQGKMLKEIGQRARVDIENLLGSKVFLELWVKVQKDWRNKISQLRDYGF 301
>gi|418576057|ref|ZP_13140203.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325119|gb|EHY92251.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 299
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM + D I+ +V+ + R DE + + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMHVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDML--KTIKTPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++E Y+K+ D E++P+SA G V+ + I + LP GP YYP D +S+HP
Sbjct: 127 VHPDELMPRIEKYKKYMDFTEIVPISALEGLNVDHFINVIKSYLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F VGE+IREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVGELIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARQDIERLLGSKVYLELWVKVQKDWRNKVNFIRQMGY 294
>gi|385812271|ref|YP_005848662.1| GTP-binding protein Era [Lactobacillus fermentum CECT 5716]
gi|299783168|gb|ADJ41166.1| GTP-binding protein Era [Lactobacillus fermentum CECT 5716]
Length = 301
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 179/297 (60%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL N M+GQK++I++N QTTR++I GI + E Q++ D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNYMVGQKVAIMSNVAQTTRNKIQGIYTSDEAQIVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI K L M ++ SA D I+ +V A + D + E + K + PI
Sbjct: 63 TPGI-HKPQTRLGXFMERSALSALDEVDAILFVVPANEKRGAGDNFIIERL--KKVQQPI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D + P ++ + YE +V+PVSA G+ V + + ++ +LP GP YY
Sbjct: 120 YLVVNKIDQVNPNDLPDIIAQYEGALPFKKVVPVSALQGNNVNTLINDLVDQLPTGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D VS+HPERF + E+IREK+F+ R EVP++ ++V S + + I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLNTREEVPHSVAIDVTSIQREDDETIHVSANIIVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGG LK + TAAR DI+ L KV+L++ VKV WR +LK YGY
Sbjct: 240 GQKGIIIGKGGSMLKKIGTAARQDIQALLGDKVFLQLWVKVVPGWRDKSAMLKDYGY 296
>gi|83589464|ref|YP_429473.1| GTP-binding protein Era [Moorella thermoacetica ATCC 39073]
gi|83572378|gb|ABC18930.1| GTP-binding protein Era [Moorella thermoacetica ATCC 39073]
Length = 301
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 181/296 (61%), Gaps = 5/296 (1%)
Query: 108 ASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
A ++G+PN GKSTL N+++G+K++I+++KPQTTR++ILG+ + YQ++ DTP
Sbjct: 4 AYRSGFAGLIGRPNAGKSTLLNRLVGRKVAIMSDKPQTTRNKILGVLTATAYQIVFLDTP 63
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD-KLPIL 226
GI K H L M+ R+ D ++ +VDA + P +E + + K+ +P++
Sbjct: 64 GI-HKPRHQLGEYMVAVARNTLAEVDVVLYVVDAAEEPGAGEEYI---ISRLKEVDVPVI 119
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L+LNK DL+ + ++ E++ DV V VSA G ++ + D I T LP GP YYP
Sbjct: 120 LILNKMDLVAGETLIRREEFFRARLDVAAVRAVSALVGTNLDTLPDLISTYLPPGPQYYP 179
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D+V++ PE+F + E+IRE++ R EVP+A V V RP ++ I VE++S
Sbjct: 180 PDMVTDQPEKFVMAELIREQVLRATREEVPHAVAVVVEEIAERPNDYLYVDAVIYVERDS 239
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IG+GG+ LK + + AR ++E L K++L + V+VK+NWRQ E L+ GY
Sbjct: 240 QKGIIIGEGGQRLKEIGSQARREMEALLGNKIFLNLRVRVKKNWRQQELTLRQLGY 295
>gi|288555745|ref|YP_003427680.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4]
gi|288546905|gb|ADC50788.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4]
Length = 303
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + E Q++ DTPGI + K
Sbjct: 14 SIIGRPNVGKSTLLNYVIGQKIAIMSDKPQTTRNKIQGVYTSNESQVVFIDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +VDA +A +E + E + + K P+ LV+NK D
Sbjct: 73 HKLGDFMMKVAQNTLREVDLILYVVDAGEAFGSGEEFIIERL--KETKTPVFLVINKIDK 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++P ++ +E Y D EVIPVSA G V + + I+ L GP YYP D V++HP
Sbjct: 131 VQPDDLLGIIETYRTKFDFTEVIPVSALQGSNVPTLMEQIVDHLEEGPQYYPSDQVTDHP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V E+IREK+ R E+P++ V + K R +I I+VE+ SQK I+IGK
Sbjct: 191 ERFIVAELIREKVLHLTREEIPHSVAVVIEQMKRRDNDMIYIGATIIVERTSQKGIIIGK 250
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G L+ + AR DIE L KV+LE+ VKV+++WR L+ YG+
Sbjct: 251 QGSMLREVGKRARGDIEALLGSKVFLELWVKVQKDWRNKSTHLRDYGF 298
>gi|242373872|ref|ZP_04819446.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W1]
gi|242348426|gb|EES40028.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W1]
Length = 300
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 11 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 70 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+++ D ++IP+SA G V+ D + + LP GP YYP D +S+HP
Sbjct: 128 VHPDALMPKIEQYKEYMDFTDIIPISALEGLNVDHFIDVLKSYLPEGPKYYPDDQISDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 188 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 248 GGKKLKEVGKRARHDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 295
>gi|399032719|ref|ZP_10731998.1| GTP-binding protein Era [Flavobacterium sp. CF136]
gi|398068874|gb|EJL60263.1| GTP-binding protein Era [Flavobacterium sp. CF136]
Length = 293
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 184/291 (63%), Gaps = 9/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q+IL DTPGII+
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQLILSDTPGIIKPAY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M +S MM V+SA +AD +V +V+ + + + + + K+P+LL+LNK D
Sbjct: 69 EMQES-MMNFVKSAFEDADILVYMVEIGEQDLKDEAFFNKII---HAKIPVLLLLNKIDN 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +++ ++ E+ P+SA V ++ I++ LP PAYYPKD +++ P
Sbjct: 125 SNQEQLEEQVAFWTAKVPNAEIFPISALQNFNVPEVFSRIISLLPESPAYYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI + Y E+PYA ++ + ++ I++ I+VE+ +QK I+I
Sbjct: 185 ERFFVNETIREKILLNYSKEIPYAVEIVTEEFFED---ENIIRIRSIIMVERETQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G ALK + AR D+E F K++++E+ VKV +NWR + +LK +GY
Sbjct: 242 GHKGAALKKVGIDARADLEKFFGKQIHIELVVKVNKNWRSNANMLKRFGYN 292
>gi|390445557|ref|ZP_10233296.1| GTPase Era [Nitritalea halalkaliphila LW7]
gi|389661759|gb|EIM73356.1| GTPase Era [Nitritalea halalkaliphila LW7]
Length = 313
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 183/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + YQ++ DTPG+++ K
Sbjct: 29 NIIGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIVNEENYQVVFSDTPGMLKPKY 88
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ SMM V + +AD I+ + D + I+++LE ++ +P+LLV+NK DL
Sbjct: 89 ELHKSMM-GFVSMSLEDADVILFVTDLFETDSEIEDVLERI---NQSGVPVLLVINKIDL 144
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
K ++ ++ V VIP+SA+ +E I IL LP P +Y K+ +++
Sbjct: 145 SKENQLEDVTAYWTSRLKVHTVIPISAQELFNIERIMQEILDILPEHPPFYDKEELTDKT 204
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFF EIIREKIF+ Y+ E+PY+ +V++ + P I+ I VE+ SQK ILIG
Sbjct: 205 ERFFASEIIREKIFVNYKKEIPYSTEVSIEDFYDEPDILK-IRAVIYVERKSQKGILIGD 263
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGKA+K + AR +E F KKV+L+ VKV+E+WR+++ LK +GY
Sbjct: 264 GGKAIKRIGIQAREALEAFFGKKVFLDTHVKVEEDWRKNKNKLKRFGY 311
>gi|429754461|ref|ZP_19287183.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429169351|gb|EKY11108.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 293
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 185/288 (64%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGII-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + E DE+ + +K +P+LL++NK D
Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEK-ELKDEVFFNRI--NKLDVPVLLLINKVDT 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +++ ++++ E+ P+SA E + + I+ LP PA++PKD +++ P
Sbjct: 124 SDQSTLEEQVAYWKEKVPRAEIFPISALRNFQTEVVFNRIIELLPESPAFFPKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV EIIREKI + Y+ E+PY+ +V S+ I+ I+VE+ SQK I+IG
Sbjct: 184 ERFFVNEIIREKILLHYKKEIPYSVEVETESFADSEMIIH-IRSVIMVERESQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ALK + AR+D+E F K+++LE+ VKV ++WR + L+ +GY
Sbjct: 243 KGEALKRVGVEARVDLEKFFGKQIHLELFVKVNKDWRSNARQLRRFGY 290
>gi|329924033|ref|ZP_08279296.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF5]
gi|328940872|gb|EGG37180.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF5]
Length = 290
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI +++
Sbjct: 2 AIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTSDSQVVFLDTPGIHKRQS 61
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M + + G + + LVDA + D + E + K K PI+LV+NK D
Sbjct: 62 KLGDYMNQTALSTLG-EVEAALFLVDASEGIGGGDRYIAEQL--QKIKTPIILVMNKIDK 118
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+P + +E Y K D E++P+SAK G V + + I LP GP YYP+D V++HP
Sbjct: 119 IEPPALLPLIEQYRKLHDFAEIVPISAKLGSNVNTLLEQIQKYLPPGPQYYPEDQVTDHP 178
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI R EVP++ V + + +I I VE++SQK I+IGK
Sbjct: 179 EQFVCAELIREKILHMTREEVPHSIAVTIEDMRVEENGTVYISAVIFVERDSQKGIIIGK 238
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DI+ L K++LE+ VKVK++WR E +L+ G+
Sbjct: 239 QGALLKEVGRQARQDIQRLLGSKIFLELWVKVKKDWRNQERVLRDLGF 286
>gi|47567864|ref|ZP_00238572.1| GTP-binding protein Era [Bacillus cereus G9241]
gi|47555541|gb|EAL13884.1| GTP-binding protein Era [Bacillus cereus G9241]
Length = 301
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K D E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLELIDQYRKLHDFAEIVPISALDGNNVESLIGTIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERPSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|317128319|ref|YP_004094601.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522]
gi|315473267|gb|ADU29870.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522]
Length = 298
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++K QTTR+RI G+ + Q+I DTPGI + K
Sbjct: 9 ALIGRPNVGKSTLLNEVLGQKIAIMSDKAQTTRNRIQGVYTEDRGQVIFIDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ LVDA + + DE + E + PI L++NK D
Sbjct: 68 HRLGDFMMKIAQTTLKEVDAILFLVDAKEGRGKGDEFIMEKL--KHVTTPIFLIVNKIDE 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++ Y K + EVIP+SA YG+ VE + D + L GP YY +DIV++HP
Sbjct: 126 VHPDELFLLIDDYRKRFEFTEVIPISALYGNNVETLLDQVFKYLDEGPQYYSEDIVTDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ EVP++ V + K R ++ IVVE++SQK I+IGK
Sbjct: 186 ERFLMAEMIREKVLHLTHEEVPHSIAVEIEQIKRRENETVYVGAVIVVERSSQKGIVIGK 245
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DI+ L KV+LE+ V+++++WR LK YGY
Sbjct: 246 QGKLLKEIGQKAREDIQKLLGSKVFLELWVRIEKDWRNKPKYLKEYGY 293
>gi|418633118|ref|ZP_13195535.1| GTP-binding protein Era [Staphylococcus epidermidis VCU129]
gi|420190179|ref|ZP_14696123.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM037]
gi|420204483|ref|ZP_14710041.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM015]
gi|374839937|gb|EHS03444.1| GTP-binding protein Era [Staphylococcus epidermidis VCU129]
gi|394259070|gb|EJE03940.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM037]
gi|394273493|gb|EJE17924.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM015]
Length = 299
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP + +S+HP
Sbjct: 127 VHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSYLPEGPKYYPDNQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV K I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDKVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|310643039|ref|YP_003947797.1| GTP-binding protein Era [Paenibacillus polymyxa SC2]
gi|309247989|gb|ADO57556.1| GTP-binding protein era-like protein [Paenibacillus polymyxa SC2]
gi|392303845|emb|CCI70208.1| era-like GTP-binding protein [Paenibacillus polymyxa M1]
Length = 300
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI +++
Sbjct: 12 AIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGIHKRQS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M S G + ++ L+DA + D + E + + K P++LVLNK D
Sbjct: 72 KLGDYMNQTAFNSLG-EVEAVLFLIDAAEGLGGGDRFIAEQL--KQVKTPVILVLNKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+P + +E Y K D E++P+SAK G+ V + D + LP GP YYP D +++HP
Sbjct: 129 IEPEALLPLIEQYRKLYDFAEIVPISAKMGNNVNTLLDQVQKYLPEGPQYYPDDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F + E++REKI R EVP++ V + K + I I VE++SQK I+IGK
Sbjct: 189 EQFVIAELVREKILHMTREEVPHSIAVMIEDMKVQENGVVHIMAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DI++ L K++LE+ VKVK++WR E +L+ G+
Sbjct: 249 QGAMLKEVGKQARQDIQNLLGSKIFLELWVKVKKDWRNQERVLRDLGF 296
>gi|381187492|ref|ZP_09895056.1| GTP-binding protein Era [Flavobacterium frigoris PS1]
gi|379650620|gb|EIA09191.1| GTP-binding protein Era [Flavobacterium frigoris PS1]
Length = 293
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 184/290 (63%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QMIL DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + + MM V+SA +AD ++ +V+ + + + + + K+P+LL+LNK D
Sbjct: 68 YEMQASMMNFVKSAFEDADILIYMVEIGEQDLKDEAFFNKII---HAKIPVLLLLNKIDT 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ +++ W EK + E+ P+SA V ++ I++ LP PAYYPKD +++
Sbjct: 125 SNQDKLEEQVAFWAEKVPNA-EIFPISALQNFNVPEVFQRIISLLPESPAYYPKDQLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV E IREKI + Y E+PYA ++ + + I+ I+VE+ +QK I+IG
Sbjct: 184 PERFFVNETIREKILLNYSKEIPYAVEIVTEEFFEDESIIR-IRSLIMVERETQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + +R D+E F K++++E+ VKV +NWR + +LK +GY
Sbjct: 243 HKGAALKKVGVDSRADLEKFFGKQIHIELYVKVNKNWRSNVNMLKRFGYN 292
>gi|409096865|ref|ZP_11216889.1| GTPase Era [Pedobacter agri PB92]
Length = 298
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 184/297 (61%), Gaps = 18/297 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPNVGKSTL N ++G++LSI+T K QTTRHRILGI + EYQ++ DTPGII+ K
Sbjct: 9 SIIGKPNVGKSTLMNVLVGERLSIITPKAQTTRHRILGIVNEEEYQIVFSDTPGIIKPKY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPER---IDEILEEGVGDHKDKLPILLVLNK 231
+ +S MM V + +AD ++ + D + + +D+IL+ + P ++++NK
Sbjct: 69 SLQES-MMSFVNGSLTDADVLLFVTDINETHDEDDVLDKILDRDI-------PTIVLINK 120
Query: 232 KDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
D ++ +K+ W EK V + +SA H V+ I +L LP P YY K+ +
Sbjct: 121 IDKALQEQVDEKIAYWQEKLNPV-SIYAISALRKHNVDGIMAHVLDLLPEHPPYYDKEDL 179
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----AKDFIQVEIVVEKN 345
++ ERFFV EIIREKIF+ Y+ E+PY+ +V V S+K A I EIVVE++
Sbjct: 180 TDRSERFFVSEIIREKIFLNYQKEIPYSTEVIVKSFKEEALKNGKGAMVRIMAEIVVERD 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
SQK ILIG GG LK + T ARL++E FL KV+LE+ VKV +WR + LK +GY
Sbjct: 240 SQKNILIGTGGSMLKKVGTEARLEVEKFLDTKVFLELFVKVIPDWRSKKNYLKSFGY 296
>gi|408673177|ref|YP_006872925.1| GTP-binding protein Era-like-protein [Emticicia oligotrophica DSM
17448]
gi|387854801|gb|AFK02898.1| GTP-binding protein Era-like-protein [Emticicia oligotrophica DSM
17448]
Length = 302
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 192/302 (63%), Gaps = 18/302 (5%)
Query: 111 PNHK----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSG----PEYQMI 162
P+HK S++GKPNVGKSTL N ++G++LSI+T+K QTTRHRI+GI +G ++Q++
Sbjct: 8 PDHKAGFISIVGKPNVGKSTLMNILVGERLSIITSKAQTTRHRIMGIVNGVQNGTDFQLV 67
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 222
DTPGII K ++ L MM V + +AD I+ + D + + D+++E+
Sbjct: 68 YSDTPGII-KPVYELHKSMMHFVHGSLEDADVILFVTDIFEKHDE-DDVIEKL---QHAN 122
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
+PILL++NK DL P +I +K+ ++++ E+IP+SA VE + I+ LP+
Sbjct: 123 IPILLIINKIDLATPEQIEEKINYWKENFKALEIIPISALQQQNVEGLLPKIVDLLPVHY 182
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EI 340
Y+PKD +++ PERFF EIIREKIF Y EVPY+C+V + S+K + +D I V EI
Sbjct: 183 PYFPKDELTDKPERFFAAEIIREKIFTNYTKEVPYSCEVVISSFKEK---EDMIVVSSEI 239
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
VE+ +Q+ IL+G G+ +K + AR ++E F KK++LE +KV+ +WR L+ +
Sbjct: 240 YVERTTQRAILLGHKGERIKKVGIEARQEMEKFFGKKIFLEQYIKVEPDWRNKRQKLERF 299
Query: 401 GY 402
GY
Sbjct: 300 GY 301
>gi|392412079|ref|YP_006448686.1| GTP-binding protein Era [Desulfomonile tiedjei DSM 6799]
gi|390625215|gb|AFM26422.1| GTP-binding protein Era [Desulfomonile tiedjei DSM 6799]
Length = 299
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 185/288 (64%), Gaps = 4/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++ G+PNVGKSTL N ++G++LSIVT K QTTR+RI I + PE Q++L+DTPGI + K
Sbjct: 15 ALAGRPNVGKSTLVNTILGRELSIVTPKAQTTRNRITAIHTMPEAQLVLHDTPGIHDPKT 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +++ ++ +AD I+++ + + R D + + +G K + P +L LNK D
Sbjct: 75 PLNRALVAIAAKTLE-DADIILLITEPLEEIHREDLQIVDMIG--KTRTPAVLALNKIDT 131
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+KP + +E + + +E++P+SA +G GV ++ + ++ LP GPA +P+D +S+ P
Sbjct: 132 VKPQALLPVIENFNRLERFEEIVPISALHGDGVTELVNILIRMLPPGPALFPEDEISDLP 191
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EI+RE+I E+PY V V S+K + + I V++ E++SQK ILIGK
Sbjct: 192 VRFFVAEIVREQITRMTGEEIPYKTSVVVESFKEE-SERILIHVDVHTERDSQKKILIGK 250
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ +K + AAR IEDFL+ V LE+ VKV NW ++E +L+ +GY
Sbjct: 251 GGRMIKQIGIAARKKIEDFLEAPVRLELFVKVTPNWTKNERMLREFGY 298
>gi|365122467|ref|ZP_09339370.1| GTP-binding protein Era [Tannerella sp. 6_1_58FAA_CT1]
gi|363642707|gb|EHL82053.1| GTP-binding protein Era [Tannerella sp. 6_1_58FAA_CT1]
Length = 294
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG++
Sbjct: 8 NIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPGVLSPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + +SA ++AD ++ + D + P + L+ +P+LL++NK DL
Sbjct: 68 KLQESMLNFS-QSALVDADILLYVTDVVEMPTKNQGFLDRVASQ---SVPVLLLINKVDL 123
Query: 235 IKPGEIAKKL--EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
+K + ++L EW+ + E+IPVSA+Y ++ + I LP P ++ KD +++
Sbjct: 124 LKDQKDLERLVEEWHSLLPNA-EIIPVSAQYKFNLDYLLKRIQELLPPSPPFFEKDSLTD 182
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
P RFFV EIIREKI Y E+PYA +V V +K I I VE++SQK I+I
Sbjct: 183 KPARFFVTEIIREKILQIYDKEIPYAVEVAVEQFK-EDEGHIHIMAIIYVERDSQKGIVI 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG ALK + T AR DIE F +KKVYLE+ VKV+++WR E LK +GY
Sbjct: 242 GKGGSALKKVGTLARKDIEAFFEKKVYLELYVKVEKDWRNKENKLKSFGY 291
>gi|410456779|ref|ZP_11310635.1| GTPase Era [Bacillus bataviensis LMG 21833]
gi|409927536|gb|EKN64669.1| GTPase Era [Bacillus bataviensis LMG 21833]
Length = 306
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 182/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ S P+ QMI DTPGI + K
Sbjct: 16 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVLSLPDAQMIFIDTPGIHKPK- 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R +E + E PI LV+NK D
Sbjct: 75 HKLGDFMMKVAQNTLKEVDLILFMVNAEEGFGRGEEFILEKF--QTVNTPIFLVINKIDQ 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ +E Y++ E++P+SA G+ VE + + I + LP GP YYP D V++HP
Sbjct: 133 IHPDKLLPIIESYKEKYAFKEIVPISALEGNNVERLLEQIKSFLPEGPQYYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF + E+IREK R E+P++ V V+ R KD I V ++VE++SQK I+I
Sbjct: 193 ERFIITELIREKALHLTREEIPHSLAV-VLDKMERREGKDIIHVMATVIVERDSQKGIII 251
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + AR DIE+ L KV+LE+ VKV+++WR L+ YG+
Sbjct: 252 GKQGSMLKEIGKRARGDIENLLGSKVFLELWVKVQKDWRNKMSQLRDYGF 301
>gi|255037604|ref|YP_003088225.1| GTP-binding protein Era [Dyadobacter fermentans DSM 18053]
gi|254950360|gb|ACT95060.1| GTP-binding protein Era [Dyadobacter fermentans DSM 18053]
Length = 308
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 191/300 (63%), Gaps = 16/300 (5%)
Query: 112 NHK----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPE----YQMIL 163
NH+ S++GKPNVGKSTL N ++G+++SI+T+K QTTRHRI+GI +G +Q++
Sbjct: 14 NHRAGFVSIIGKPNVGKSTLMNVLVGERMSIITSKAQTTRHRIIGILNGNHENIPFQLVY 73
Query: 164 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD-ACKAPERIDEILEEGVGDHKDK 222
DTPG+I+ + DSMM V+ + +AD ++ +V+ KA E E+L ++ +
Sbjct: 74 SDTPGVIKPSYKLHDSMMT-FVKGSLEDADVVLFVVEIGEKAAEH--EVLPLL---NRTQ 127
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P++LVLNK DL E+ +K++ +E +IP+SA + + D ++T+LP P
Sbjct: 128 SPVVLVLNKIDLSNEEEVKQKMQEWENEIHPAAIIPISALEKANIGTLFDAVVTRLPFHP 187
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
Y+ +D +++ PERFF EIIREKIF+ YR E+PY+ +V + +K R I+ EI+V
Sbjct: 188 PYFDEDELTDKPERFFASEIIREKIFLNYRQEIPYSSEVVITEFKDRDDII-VIRAEILV 246
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ SQK I+IG+ G+ LK + AR D+E+F KKV+LE VKV+ +WR E L+ GY
Sbjct: 247 ERKSQKGIIIGEKGEMLKKVGIQARQDLEEFFGKKVFLEQHVKVEPDWRSKENKLRQLGY 306
>gi|416125306|ref|ZP_11595904.1| GTP-binding protein Era [Staphylococcus epidermidis FRI909]
gi|420178264|ref|ZP_14684597.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM057]
gi|420180072|ref|ZP_14686332.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM053]
gi|420199500|ref|ZP_14705178.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM031]
gi|319400903|gb|EFV89122.1| GTP-binding protein Era [Staphylococcus epidermidis FRI909]
gi|394246890|gb|EJD92142.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM057]
gi|394251504|gb|EJD96589.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM053]
gi|394272282|gb|EJE16751.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM031]
Length = 299
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP + +S+HP
Sbjct: 127 VHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDNQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV K I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDKVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|149183349|ref|ZP_01861787.1| Era [Bacillus sp. SG-1]
gi|148848946|gb|EDL63158.1| Era [Bacillus sp. SG-1]
Length = 297
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 182/293 (62%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + E QMI DTPGI + K
Sbjct: 8 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVYTTNESQMIFIDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEE---GVGDHKDKLPILLVLNK 231
H L MMK ++ D I+ +++A + R DE + E GV K P+ LVLNK
Sbjct: 67 HKLGDFMMKIAQNTLREVDIILFMINAEEGYGRGDEFIIEKLKGV-----KTPVFLVLNK 121
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + P +I +E Y D V+P+SA G+ VE + I +LP GP YYP D ++
Sbjct: 122 IDQLHPDKILPLIEQYNALHDFAAVVPISALEGNNVETLISEIRKELPEGPQYYPADQIT 181
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKI 349
+HPERF V E+IREK R E+P++ V + TR K+ I V IVVE++SQK
Sbjct: 182 DHPERFIVSELIREKALHLTREEIPHSLAVVIDKISTR-GDKNVIDVMATIVVERDSQKG 240
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + AR+DIE+ L KVYLE+ VKV+++WR L+ +G+
Sbjct: 241 IIIGKQGGMLKEIGKRARVDIENLLGSKVYLELWVKVQKDWRNKLSNLRDFGF 293
>gi|404370264|ref|ZP_10975587.1| GTPase Era [Clostridium sp. 7_2_43FAA]
gi|226913614|gb|EEH98815.1| GTPase Era [Clostridium sp. 7_2_43FAA]
Length = 296
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G ++Q++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNHIMGEKLSIVSNKPQTTRNNIQTILTGKDHQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + D ++ L++ + R D+ + E + + K P+ LV+NK D
Sbjct: 67 HKLGEYMVNSAKDSIKEVDLVLFLINPEEEIGRGDKFIIETLKNQK--APVFLVVNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+AK L+ Y + E+IP+SA G V+ + + ++ +P GP YYP D++++
Sbjct: 125 FTQERVAKTLQMYSSELEFKEIIPISALRGKNVDKLVELMIETMPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK R E+P+ V+++ K P+ I+V+++ EK+S K I+IGK
Sbjct: 185 ERFVVSEIVREKALRTLREEIPHGIAVDIIQMKQSPSGTWHIEVDMLCEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + +AR +IE FL KV L+I VKV++ WR ++ LLK GY
Sbjct: 245 NGQCLKKIGESARYEIEKFLGAKVNLKIWVKVRKEWRDNQNLLKELGY 292
>gi|42783426|ref|NP_980673.1| GTP-binding protein Era [Bacillus cereus ATCC 10987]
gi|49481311|ref|YP_038355.1| GTP-binding protein Era [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141202|ref|YP_085626.1| GTP-binding protein Era [Bacillus cereus E33L]
gi|118479469|ref|YP_896620.1| GTP-binding protein Era [Bacillus thuringiensis str. Al Hakam]
gi|196034381|ref|ZP_03101790.1| GTP-binding protein Era [Bacillus cereus W]
gi|196039186|ref|ZP_03106492.1| GTP-binding protein Era [Bacillus cereus NVH0597-99]
gi|196046320|ref|ZP_03113546.1| GTP-binding protein Era [Bacillus cereus 03BB108]
gi|206978417|ref|ZP_03239286.1| GTP-binding protein Era [Bacillus cereus H3081.97]
gi|217961790|ref|YP_002340360.1| GTP-binding protein Era [Bacillus cereus AH187]
gi|218905437|ref|YP_002453271.1| GTP-binding protein Era [Bacillus cereus AH820]
gi|222097745|ref|YP_002531802.1| GTP-binding protein era [Bacillus cereus Q1]
gi|225866281|ref|YP_002751659.1| GTP-binding protein Era [Bacillus cereus 03BB102]
gi|254721891|ref|ZP_05183680.1| GTP-binding protein Era [Bacillus anthracis str. A1055]
gi|301055792|ref|YP_003794003.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|375286305|ref|YP_005106744.1| GTP-binding protein Era [Bacillus cereus NC7401]
gi|376268197|ref|YP_005120909.1| GTP-binding protein Era like protein [Bacillus cereus F837/76]
gi|384182120|ref|YP_005567882.1| GTPase Era [Bacillus thuringiensis serovar finitimus YBT-020]
gi|402555565|ref|YP_006596836.1| GTPase Era [Bacillus cereus FRI-35]
gi|423354793|ref|ZP_17332418.1| GTPase Era [Bacillus cereus IS075]
gi|423373821|ref|ZP_17351160.1| GTPase Era [Bacillus cereus AND1407]
gi|423549958|ref|ZP_17526285.1| GTPase Era [Bacillus cereus ISP3191]
gi|423570540|ref|ZP_17546785.1| GTPase Era [Bacillus cereus MSX-A12]
gi|423574020|ref|ZP_17550139.1| GTPase Era [Bacillus cereus MSX-D12]
gi|423604050|ref|ZP_17579943.1| GTPase Era [Bacillus cereus VD102]
gi|42739355|gb|AAS43281.1| GTP-binding protein Era [Bacillus cereus ATCC 10987]
gi|49332867|gb|AAT63513.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51974671|gb|AAU16221.1| GTP-binding protein [Bacillus cereus E33L]
gi|118418694|gb|ABK87113.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|195992923|gb|EDX56882.1| GTP-binding protein Era [Bacillus cereus W]
gi|196022790|gb|EDX61471.1| GTP-binding protein Era [Bacillus cereus 03BB108]
gi|196029813|gb|EDX68414.1| GTP-binding protein Era [Bacillus cereus NVH0597-99]
gi|206743373|gb|EDZ54811.1| GTP-binding protein Era [Bacillus cereus H3081.97]
gi|217063790|gb|ACJ78040.1| GTP-binding protein Era [Bacillus cereus AH187]
gi|218535830|gb|ACK88228.1| GTP-binding protein Era [Bacillus cereus AH820]
gi|221241803|gb|ACM14513.1| GTP-binding protein [Bacillus cereus Q1]
gi|225786790|gb|ACO27007.1| GTP-binding protein Era [Bacillus cereus 03BB102]
gi|300377961|gb|ADK06865.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|324328204|gb|ADY23464.1| GTPase Era [Bacillus thuringiensis serovar finitimus YBT-020]
gi|358354832|dbj|BAL20004.1| GTP-binding protein Era [Bacillus cereus NC7401]
gi|364513997|gb|AEW57396.1| GTP-binding protein Era like protein [Bacillus cereus F837/76]
gi|401086103|gb|EJP94334.1| GTPase Era [Bacillus cereus IS075]
gi|401095222|gb|EJQ03282.1| GTPase Era [Bacillus cereus AND1407]
gi|401189574|gb|EJQ96624.1| GTPase Era [Bacillus cereus ISP3191]
gi|401203736|gb|EJR10571.1| GTPase Era [Bacillus cereus MSX-A12]
gi|401212589|gb|EJR19332.1| GTPase Era [Bacillus cereus MSX-D12]
gi|401245736|gb|EJR52089.1| GTPase Era [Bacillus cereus VD102]
gi|401796775|gb|AFQ10634.1| GTPase Era [Bacillus cereus FRI-35]
Length = 301
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K D E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLELIDQYRKLHDFAEIVPISALDGNNVEALIGTIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERPSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|332686714|ref|YP_004456488.1| GTP-binding protein Era [Melissococcus plutonius ATCC 35311]
gi|332370723|dbj|BAK21679.1| GTP-binding protein Era [Melissococcus plutonius ATCC 35311]
Length = 300
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 184/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + + Q+I DTPGI + K
Sbjct: 11 AIIGRPNVGKSTLLNRIVGQKVAIMSDKAQTTRNKIQGIYTTQKAQLIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M++ SA D + ++ A + + D+ + E + + ++ P+ LV+NK D
Sbjct: 70 HRLGDFMVETAYSALREVDATLFMISADQKRGKGDDFIIERLKEMQN--PVYLVINKIDK 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ +E Y + E+IP+SA G+ + + D ++ ++P+GP Y+P+D V++HP
Sbjct: 128 IHPDDLLGIIEDYSQQMTFKEIIPISATEGNNFDHLMDVLVEQMPVGPQYFPEDQVTDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F V E+IREKI R E+P++ V V S K K IQ IVVE++SQK I+IG
Sbjct: 188 EYFIVSELIREKILQLTREEIPHSVAVIVDSMKRDENDKVHIQATIVVERDSQKGIIIGN 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR + L+ +GY
Sbjct: 248 GGKMLKQVGIKARQDIEHLLDDKVYLELWVKVQKDWRDKKLYLQDFGY 295
>gi|301066560|ref|YP_003788583.1| GTPase [Lactobacillus casei str. Zhang]
gi|300438967|gb|ADK18733.1| GTPase [Lactobacillus casei str. Zhang]
Length = 300
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 187/300 (62%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFVNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDK 222
+ K + LD+ M K S D I+ +V+A DE E+G GD + K
Sbjct: 65 HKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+GP
Sbjct: 115 KPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|300770940|ref|ZP_07080817.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33861]
gi|300762213|gb|EFK59032.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33861]
Length = 292
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 183/290 (63%), Gaps = 10/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPN GKSTL N ++G+K+SI+T K QTTRHRI+GI + +Q++ DTPG+I K
Sbjct: 9 SIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRIMGIVNDENHQIVFSDTPGVI-KPN 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE--ILEEGVGDHKDKLPILLVLNKK 232
+ L MM V+ + I+AD I+ + D E+ DE ++E+ K P+ +++NK
Sbjct: 68 YSLQESMMNFVQGSLIDADIILFVTDIN---EKYDENDVIEKL---RKTSSPVAVLINKI 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D ++ K+E++++ + D + +SA + H V I D+I KLP YY KD +++
Sbjct: 122 DKSTEEDVKAKIEFWKEKLNPDTIFAISALHQHNVVAIMDYIKEKLPEHAPYYEKDELTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
RFFV E+IREK+F Y E+PY+ +V + SYK P I EI+VE++SQK ILI
Sbjct: 182 KSMRFFVSEMIREKVFKLYDKEIPYSTEVIITSYKEEPKITR-IAAEIIVERDSQKNILI 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G+ +K + T AR DIE+F+ KV+LEI VKV +WR + LK +GY
Sbjct: 241 GKAGEMIKKVGTYARQDIEEFIGGKVFLEIFVKVIPDWRSKKNYLKRFGY 290
>gi|23099406|ref|NP_692872.1| GTP-binding protein [Oceanobacillus iheyensis HTE831]
gi|81746143|sp|Q8EPY0.1|ERA_OCEIH RecName: Full=GTPase Era
gi|22777635|dbj|BAC13907.1| GTP-binding protein (Era/TrmE family) [Oceanobacillus iheyensis
HTE831]
Length = 300
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++K QTTR++I G+ + + QMI DTPGI + K
Sbjct: 11 SIIGRPNVGKSTFMNKVIGQKIAIMSDKAQTTRNKIQGVFTTNDAQMIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M++ D I+ +++A + R D+ + + + K P+ L++NK DL
Sbjct: 70 HRLGDFMVQIAEDTLNEVDSILFMINADEGYGRGDQYIIDLL--QKVNSPVFLIINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ +E Y+ D +E+IP+SA G+ V+ + D + LP GP YYP+D V++HP
Sbjct: 128 IHPDQLLPLIEKYKSLYDFEEIIPISALEGNNVDHLVDVLKEHLPEGPQYYPEDQVTDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ + EVP++ V + + + K IQ IV E++SQK ILIGK
Sbjct: 188 ERFVISELIREKVLHLTKEEVPHSIAVVIENIEKNENEKLLIQATIVTERSSQKGILIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KVYLE+ +KVK++WR + L +G+
Sbjct: 248 QGTMLKNIGKQARRDIEALLGSKVYLELWIKVKKDWRNRQNQLHEFGF 295
>gi|420174669|ref|ZP_14681117.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM061]
gi|420192318|ref|ZP_14698178.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM023]
gi|394244573|gb|EJD89908.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM061]
gi|394261529|gb|EJE06326.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM023]
Length = 299
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP + +S+HP
Sbjct: 127 VHPDTLMPKIEQYQSYMDFTDIIPISALEGMNVDHFIDVLKSFLPEGPKYYPDNQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|289550662|ref|YP_003471566.1| GTP-binding protein Era [Staphylococcus lugdunensis HKU09-01]
gi|315658157|ref|ZP_07911029.1| GTP-binding protein Era [Staphylococcus lugdunensis M23590]
gi|385784288|ref|YP_005760461.1| putative GTP-binding protein [Staphylococcus lugdunensis N920143]
gi|418413964|ref|ZP_12987180.1| GTPase Era [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635809|ref|ZP_13198168.1| GTP-binding protein Era [Staphylococcus lugdunensis VCU139]
gi|289180194|gb|ADC87439.1| GTP-binding protein Era [Staphylococcus lugdunensis HKU09-01]
gi|315496486|gb|EFU84809.1| GTP-binding protein Era [Staphylococcus lugdunensis M23590]
gi|339894544|emb|CCB53826.1| putative GTP-binding protein [Staphylococcus lugdunensis N920143]
gi|374841497|gb|EHS04969.1| GTP-binding protein Era [Staphylococcus lugdunensis VCU139]
gi|410877602|gb|EKS25494.1| GTPase Era [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 299
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + + + K P+ LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMDML--RNVKTPVFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++E Y+K+ + E++P+SA G V+ D + + LP GP YYP D +S+HP
Sbjct: 127 VHPDSLMPRIEAYQKYMNFTEIVPISALEGLNVDHFIDVLKSHLPEGPKYYPDDQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKENEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEVGKRARHDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQIGY 294
>gi|239631408|ref|ZP_04674439.1| GTPase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|417980798|ref|ZP_12621477.1| GTP-binding protein [Lactobacillus casei 12A]
gi|417983530|ref|ZP_12624166.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|417989754|ref|ZP_12630255.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|417999249|ref|ZP_12639460.1| GTP-binding protein [Lactobacillus casei T71499]
gi|418002193|ref|ZP_12642315.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|418008114|ref|ZP_12647983.1| GTP-binding protein [Lactobacillus casei UW4]
gi|418010953|ref|ZP_12650724.1| GTP-binding protein [Lactobacillus casei Lc-10]
gi|418015193|ref|ZP_12654770.1| GTP-binding protein [Lactobacillus casei Lpc-37]
gi|239525873|gb|EEQ64874.1| GTPase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|410524309|gb|EKP99221.1| GTP-binding protein [Lactobacillus casei 12A]
gi|410527799|gb|EKQ02661.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|410537499|gb|EKQ12073.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|410539525|gb|EKQ14053.1| GTP-binding protein [Lactobacillus casei T71499]
gi|410544621|gb|EKQ18942.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|410547342|gb|EKQ21577.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410552017|gb|EKQ26056.1| GTP-binding protein [Lactobacillus casei Lpc-37]
gi|410553532|gb|EKQ27535.1| GTP-binding protein [Lactobacillus casei Lc-10]
Length = 300
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 187/300 (62%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDK 222
+ K + LD+ M K S D I+ +V+A DE E+G GD + K
Sbjct: 65 HKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+GP
Sbjct: 115 KPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|333371643|ref|ZP_08463588.1| GTP-binding protein Era [Desmospora sp. 8437]
gi|332975861|gb|EGK12739.1| GTP-binding protein Era [Desmospora sp. 8437]
Length = 300
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ++GQK++I+++KPQTTR++I G+ + Q+I DTPGI + K
Sbjct: 12 TLIGRPNVGKSTLLNQVLGQKVAIMSDKPQTTRNKIRGVYTTEAEQIIFLDTPGIHKPKS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ R D I+ LVDA + D + E + K P+ LV+NK D
Sbjct: 72 RLGD-WMVQTARETFEEVDVILFLVDAKEGMGPGDRFIMEQL--KAVKTPVFLVVNKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++ Y K EV+PVSA YG+ + D I +LP GPAYYP + V++HP
Sbjct: 129 VHPDTLLPLIDRYRKTFSFKEVVPVSALYGNNTTTLLDLIRRELPEGPAYYPSEYVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF +GE++REK+ R EVP++ V V K + F++ I E+ SQK ILIGK
Sbjct: 189 ERFIIGELVREKVLHLTREEVPHSVAVVVEEMKEEEEGRVFVRATIYTERQSQKGILIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR +I+ L +VYL++ VKVK++WR +E LL+ +GY
Sbjct: 249 QGSMLKEVGRRAREEIQRLLGSRVYLDLWVKVKKDWRNEEFLLRQFGY 296
>gi|229916327|ref|YP_002884973.1| GTP-binding protein Era [Exiguobacterium sp. AT1b]
gi|229467756|gb|ACQ69528.1| GTP-binding protein Era [Exiguobacterium sp. AT1b]
Length = 302
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 182/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVYTTDDSQIIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +V+ + D+ + E + PI+LV+NK DL
Sbjct: 71 HRLGDFMMKVATNALREVDAILFMVNVTEPRGAGDDFIIEKLKGLD--TPIILVMNKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ K +E Y D +P+SA G+ VE + I LP GP YYP D V++HP
Sbjct: 129 IHPDELPKVIEQYTNELDFAAYVPISALQGNNVEPLLGEIKKLLPEGPMYYPADQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERF + E+IREK+ + R+EVP++ V + S K R + + I VE I+VE++SQK I+I
Sbjct: 189 ERFIISEMIREKVLHKTRDEVPHSIAVAIESIKKRENS-EMIDVEAVIMVERDSQKGIII 247
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G L+ + T AR DIE L KVYL + VKV+++WR G L+ G+
Sbjct: 248 GKKGAMLREIGTDARHDIEALLGTKVYLNLWVKVQKDWRNKMGQLRDLGF 297
>gi|402846555|ref|ZP_10894867.1| GTP-binding protein Era [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402267956|gb|EJU17346.1| GTP-binding protein Era [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 300
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 187/288 (64%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DTPG++
Sbjct: 15 NIVGNPNVGKSTLMNLLVGERVSIITSKAQTTRHRIMGIVNTPELQIVYSDTPGVLRPNY 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + + G +AD ++ + D + ++ + LE G K P+LL++NK DL
Sbjct: 75 KLQESMLEFSESALG-DADVLLYVTDTVETADKNEFFLERVRGV---KCPVLLLINKVDL 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + ++ + K E+IP+SA V+ ++ I + +P P Y+ KD +++ P
Sbjct: 131 TTQDKLVELVDRWHKELPQAEIIPISALNNFNVQPLKKRIESLIPPSPPYFEKDALTDRP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREK+ + Y+ E+PY+ +V V S+K + IQ IVVE++SQK I+IG
Sbjct: 191 ARFFVTEIIREKVLLYYKKEIPYSVEVVVESFKEE-DERIHIQALIVVERDSQKGIIIGH 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G A+K + T AR D+E F +KK++LE+ VKV+++WR + +L+ YGY
Sbjct: 250 RGVAIKKVGTMARRDMERFFEKKIFLELFVKVEKDWRNRDKILRAYGY 297
>gi|418614664|ref|ZP_13177626.1| GTP-binding protein Era [Staphylococcus epidermidis VCU118]
gi|374819200|gb|EHR83328.1| GTP-binding protein Era [Staphylococcus epidermidis VCU118]
Length = 299
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP + +S+HP
Sbjct: 127 VHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSYLPEGPKYYPDNQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|429742024|ref|ZP_19275671.1| ribosome biogenesis GTPase Era [Porphyromonas catoniae F0037]
gi|429157665|gb|EKY00246.1| ribosome biogenesis GTPase Era [Porphyromonas catoniae F0037]
Length = 301
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 184/296 (62%), Gaps = 9/296 (3%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P H+S ++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DT
Sbjct: 8 PQHRSGFVNIVGNPNVGKSTLMNLLVGERVSIITSKAQTTRHRIMGIVNTPELQIVYSDT 67
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PG++ + +SM+ + + G +AD ++ + D + ++ + L G K P++
Sbjct: 68 PGVLRPSYKLQESMLEFSESALG-DADVLLYVTDTVETADKNEFFLNRVRGI---KCPLI 123
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK DL + +E + K E+IP+SA VE +R I + +P P Y+
Sbjct: 124 LIINKVDLTNEEALVALVERWHKELPEAEIIPLSALNNFNVEALRRRIESLIPPSPPYFD 183
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
KD +++ P RFFV EIIREK+ + Y+ E+PY+ +V V +++ + IQ IV E+ S
Sbjct: 184 KDALTDKPARFFVTEIIREKVLLYYQKEIPYSVEVVVETFREE-ADRIHIQALIVAERES 242
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IG G ALK + T AR D+E F K+++LE+ VKV+++WR + LL+ YGY
Sbjct: 243 QKGIIIGHKGAALKKVGTMARRDMERFFDKRIFLELFVKVEKDWRNRDNLLRAYGY 298
>gi|227513295|ref|ZP_03943344.1| GTP-binding protein Era [Lactobacillus buchneri ATCC 11577]
gi|227083496|gb|EEI18808.1| GTP-binding protein Era [Lactobacillus buchneri ATCC 11577]
Length = 300
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 184/298 (61%), Gaps = 10/298 (3%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN++S ++G+PNVGKST N+++ QK++I+++K QTTR++I G+ + E Q++ D
Sbjct: 3 NPNYRSGFVAIVGRPNVGKSTFLNRVVAQKIAIMSDKAQTTRNKIQGVYTTDEAQVVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-HKDKLP 224
TPGI K + L MM + SA D ++ +V+A + D + + + D HK P
Sbjct: 63 TPGI-HKPQNKLGDFMMDSALSALKEVDAVLFMVNATERRGAGDNFIIDRLKDVHK---P 118
Query: 225 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
I L++NK D I P ++ +E Y+ EV P+SA G+ V ++ ++ +LP GP Y
Sbjct: 119 IYLLINKIDEITPDDVMAIIEQYKNALSFKEVFPISALQGNNVPELLTSLIKELPNGPQY 178
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 344
YPKD V++HPERF + E+IREK+ R E+P++ V + S K + IQ I+VE+
Sbjct: 179 YPKDQVTDHPERFVISELIREKVLQMTRQEIPHSTAVYIESIKKQDEVL-HIQATIIVER 237
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ QK I+IGKGG LK + T AR DIE+ + KVYLE+ VKV+ +WR LL YGY
Sbjct: 238 DGQKGIVIGKGGSMLKKIGTLARKDIENMMGNKVYLELWVKVEAHWRDKANLLNSYGY 295
>gi|191638504|ref|YP_001987670.1| GTP-binding protein Era [Lactobacillus casei BL23]
gi|385820212|ref|YP_005856599.1| GTP-binding protein Era [Lactobacillus casei LC2W]
gi|385823409|ref|YP_005859751.1| GTP-binding protein Era [Lactobacillus casei BD-II]
gi|409997364|ref|YP_006751765.1| GTPase Era [Lactobacillus casei W56]
gi|226741221|sp|B3WEL1.1|ERA_LACCB RecName: Full=GTPase Era
gi|190712806|emb|CAQ66812.1| GTP-binding protein era homolog [Lactobacillus casei BL23]
gi|327382539|gb|AEA54015.1| GTP-binding protein Era [Lactobacillus casei LC2W]
gi|327385736|gb|AEA57210.1| GTP-binding protein Era [Lactobacillus casei BD-II]
gi|406358376|emb|CCK22646.1| GTPase Era [Lactobacillus casei W56]
Length = 300
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 187/300 (62%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDK 222
+ K + LD+ M K S D I+ +V+A DE E+G GD + K
Sbjct: 65 HKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+GP
Sbjct: 115 KPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARHDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|315224466|ref|ZP_07866293.1| GTP-binding protein Era [Capnocytophaga ochracea F0287]
gi|420159053|ref|ZP_14665862.1| GTP-binding protein Era [Capnocytophaga ochracea str. Holt 25]
gi|314945487|gb|EFS97509.1| GTP-binding protein Era [Capnocytophaga ochracea F0287]
gi|394762740|gb|EJF44927.1| GTP-binding protein Era [Capnocytophaga ochracea str. Holt 25]
Length = 293
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 185/290 (63%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGII-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ L + MM V+SA +AD ++ +V+ + E+ +E ++L P+LL++NK
Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFKRINQLDVPVLLLINKV 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D G + +++ ++++ E+ P+SA E + + I+ LP PA++PKD +++
Sbjct: 122 DTSDQGVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFPKDQLTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ SQK I+I
Sbjct: 182 KPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+ALK + AR D+E F K+++LE+ VKV ++WR + L+ +GY
Sbjct: 241 GHKGEALKRVGIEARADLEKFFGKQIHLELFVKVNKDWRNNVRQLRRFGY 290
>gi|375254264|ref|YP_005013431.1| ribosome biogenesis GTPase Era [Tannerella forsythia ATCC 43037]
gi|363406165|gb|AEW19851.1| ribosome biogenesis GTPase Era [Tannerella forsythia ATCC 43037]
Length = 297
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 182/294 (61%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL NQ++G+++SI+T+K QTTRHRILGI + Q++ DTPG
Sbjct: 6 HKSGFVNIIGNPNVGKSTLMNQLVGERISIITSKAQTTRHRILGIVNTDNMQIVYSDTPG 65
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + L M ++ SA +AD ++ + D + ++ D+ L+ + K P+LL+
Sbjct: 66 VLRPN-YKLQETMRESSESALGDADVLLYVTDVIEKTDKNDDFLQRV---RQAKCPVLLL 121
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK DL ++ +E + E+IP+SA +E ++ I +P P Y+ KD
Sbjct: 122 INKIDLADQPKLETLVEEWHALLPEAEIIPISATSKFNIEPLKKRIRELIPDSPPYFEKD 181
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ P RFFV EIIREKI + Y+ E+PYA +V V + PT I+ I+VE+ +QK
Sbjct: 182 ALTDRPARFFVTEIIREKILLYYQKEIPYATEVVVEQFIEEPTCVH-IKALIIVERETQK 240
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG GG+ALK + AR D+E F +KK++LE+ VKV +WR + LLK +GY
Sbjct: 241 GIIIGHGGQALKKVGMMARKDMERFFEKKIFLELFVKVVSDWRNRDNLLKSFGY 294
>gi|319651594|ref|ZP_08005721.1| era protein [Bacillus sp. 2_A_57_CT2]
gi|317396661|gb|EFV77372.1| era protein [Bacillus sp. 2_A_57_CT2]
Length = 306
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 183/290 (63%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q I DTPGI + K
Sbjct: 16 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNDAQFIFIDTPGIHKPK- 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R +E + E + PI LV+NK D
Sbjct: 75 HKLGDFMMKVAQNTLKEVDVILFMVNAQEGFGRGEEFILEKF--QSVRTPIFLVINKIDQ 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ K +E Y++ + E+IP+SA G+ VE + I +P GP +YP D V++HP
Sbjct: 133 VHPDELLKIIESYKEKYEFSEIIPISALEGNNVETLLGQIKEYIPEGPQFYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF V E+IREK R E+P++ V + + R KD I V I+VE++SQK I+I
Sbjct: 193 ERFIVSELIREKALHLTREEIPHSLAVTIDKMERRED-KDVIHVMATIIVERDSQKGIVI 251
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK GK LK + AR+DIE+ L KV+LE+ VKV+++WR L+ +G+
Sbjct: 252 GKQGKMLKEIGKRARVDIENLLGSKVFLELWVKVQKDWRNKMSQLRDFGF 301
>gi|365961173|ref|YP_004942740.1| GTPase Era [Flavobacterium columnare ATCC 49512]
gi|365737854|gb|AEW86947.1| GTPase Era [Flavobacterium columnare ATCC 49512]
Length = 294
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 184/290 (63%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G +Q++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDNFQILFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + + + + + K+P+LL+LNK D
Sbjct: 68 YELQSSMMDFVKSAFEDADILIYMVEIGEKSLKDEAFFNKII---HSKIPVLLLLNKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ +++ W EK + E+ P+SA ++ + D I+ LP YYPKD +++
Sbjct: 125 SNQEQLEEQVTIWKEKVPNA-EIFPISALENFNIQAVFDRIIELLPQSEPYYPKDALTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV E IREKI + Y E+PYAC+V +K T I+ I+VE+++QK I+IG
Sbjct: 184 PERFFVNEAIREKILLNYDKEIPYACEVETEEFKEDDTIIR-IRTLIMVERDTQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G A+K + AR ++E F K++++E+ VKV ++WR +E L+ +GY
Sbjct: 243 HKGAAIKKVGIQARQELEKFFGKQIHIELYVKVNKDWRSNEKQLRRFGYN 292
>gi|417986872|ref|ZP_12627437.1| GTP-binding protein [Lactobacillus casei 32G]
gi|410524606|gb|EKP99514.1| GTP-binding protein [Lactobacillus casei 32G]
Length = 300
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 187/300 (62%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDK 222
+ K + LD+ M K S D I+ +V+A DE E+G GD + K
Sbjct: 65 HKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+GP
Sbjct: 115 KPVYLIINKIDLVKPDDLLPLIENYQHDYAFAQVFPISATMGNNVDELLTALTDALPVGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|418605497|ref|ZP_13168821.1| GTP-binding protein Era [Staphylococcus epidermidis VCU041]
gi|418616397|ref|ZP_13179322.1| GTP-binding protein Era [Staphylococcus epidermidis VCU120]
gi|420183229|ref|ZP_14689362.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM049]
gi|420194865|ref|ZP_14700662.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM021]
gi|420214027|ref|ZP_14719307.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05005]
gi|420216485|ref|ZP_14721693.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05001]
gi|420220513|ref|ZP_14725472.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04008]
gi|420232082|ref|ZP_14736724.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051668]
gi|420234729|ref|ZP_14739289.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051475]
gi|374402386|gb|EHQ73416.1| GTP-binding protein Era [Staphylococcus epidermidis VCU041]
gi|374821223|gb|EHR85290.1| GTP-binding protein Era [Staphylococcus epidermidis VCU120]
gi|394249692|gb|EJD94905.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM049]
gi|394263925|gb|EJE08646.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM021]
gi|394283949|gb|EJE28110.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05005]
gi|394285866|gb|EJE29932.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04008]
gi|394291851|gb|EJE35634.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05001]
gi|394301804|gb|EJE45258.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051668]
gi|394303972|gb|EJE47382.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051475]
Length = 299
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP + +S+HP
Sbjct: 127 VHPDTMMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDNQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|331701380|ref|YP_004398339.1| GTP-binding protein Era-like-protein [Lactobacillus buchneri NRRL
B-30929]
gi|406026942|ref|YP_006725774.1| GTP-binding protein era [Lactobacillus buchneri CD034]
gi|329128723|gb|AEB73276.1| GTP-binding protein Era-like-protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125431|gb|AFS00192.1| GTP-binding protein era [Lactobacillus buchneri CD034]
Length = 300
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 185/300 (61%), Gaps = 18/300 (6%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + E Q++ DTPGI
Sbjct: 7 HSGFIAIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTKEAQIVFIDTPGI 66
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL---- 223
K + L MM++ SA D ++ +V+A + G GD+ D+L
Sbjct: 67 -HKPQNKLGDFMMESALSALKEVDAVLFMVNATE---------HRGAGDNFIIDQLKNVD 116
Query: 224 -PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
PI L++NK D I P +I +E Y+ + +V P+SA G+ V ++ D ++ +LP GP
Sbjct: 117 KPIYLLINKIDEISPDDIMPIIEQYKNALEFKDVYPISALQGNNVPELIDTLIKELPNGP 176
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP D V++HPERF + E+IREK+ R E+P++ V + S KT + I+ I+V
Sbjct: 177 QYYPADEVTDHPERFVISELIREKVLELTRQEIPHSTAVVIESIKTEDSLLR-IRATIIV 235
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++ QK I+IGKGG LK + T AR DIE+ + KV+LE+ VKV+ +WR LL YGY
Sbjct: 236 ERDGQKGIVIGKGGSMLKKIGTLARKDIENMMGNKVFLELWVKVEPHWRDKANLLNSYGY 295
>gi|57867009|ref|YP_188710.1| GTP-binding protein Era [Staphylococcus epidermidis RP62A]
gi|418612786|ref|ZP_13175810.1| GTP-binding protein Era [Staphylococcus epidermidis VCU117]
gi|418626405|ref|ZP_13189017.1| GTP-binding protein Era [Staphylococcus epidermidis VCU126]
gi|81674466|sp|Q5HNY0.1|ERA_STAEQ RecName: Full=GTPase Era
gi|57637667|gb|AAW54455.1| GTP-binding protein Era [Staphylococcus epidermidis RP62A]
gi|374817863|gb|EHR82038.1| GTP-binding protein Era [Staphylococcus epidermidis VCU117]
gi|374832839|gb|EHR96544.1| GTP-binding protein Era [Staphylococcus epidermidis VCU126]
Length = 299
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP + +S+HP
Sbjct: 127 VHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDNQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIETTIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|336395489|ref|ZP_08576888.1| GTPase Era [Lactobacillus farciminis KCTC 3681]
Length = 303
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++I ++++I + K QTTR++I GI + E Q+I DTPGI K
Sbjct: 11 AIIGRPNVGKSTFMNRIIKEQIAITSPKAQTTRNKIQGIYTDDERQIIFLDTPGI-HKPH 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ LD M K SA D ++ + +A + D+ + E + K K P+ L+LNK DL
Sbjct: 70 NDLDQYMDKAAISALKEVDAVLFMTEAGEQAGPGDKFIIEEL--KKVKAPVFLILNKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+A +++ Y+ D E+IP+SA G+ V+D+ D + LP+GP YY D +++HP
Sbjct: 128 INPDEMAPQIDEYKDLMDFAEIIPISATNGNNVDDLIDSLTKALPVGPQYYADDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
E F VGE+IREKI R+E+P++ V V S R A I+ I VE++SQK I+IG
Sbjct: 188 EYFIVGELIREKILEDTRDEIPHSIAVVVESMNQRSEAGKLQIEAYIYVERDSQKPIVIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + +R+ IE L +KV L++ V+VK+NWR D L GY
Sbjct: 248 KGGSMLKNIGIGSRIKIEHLLGEKVNLKLWVRVKKNWRDDPAFLASAGY 296
>gi|423440950|ref|ZP_17417856.1| GTPase Era [Bacillus cereus BAG4X2-1]
gi|423464015|ref|ZP_17440783.1| GTPase Era [Bacillus cereus BAG6O-1]
gi|423533378|ref|ZP_17509796.1| GTPase Era [Bacillus cereus HuB2-9]
gi|402417611|gb|EJV49911.1| GTPase Era [Bacillus cereus BAG4X2-1]
gi|402420282|gb|EJV52553.1| GTPase Era [Bacillus cereus BAG6O-1]
gi|402463597|gb|EJV95297.1| GTPase Era [Bacillus cereus HuB2-9]
Length = 301
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNATEGFGRGEEFIIEKLQETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLELIDQYRKLHEFAEIVPISALDGNNVEALIGAIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEIGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|27468172|ref|NP_764809.1| GTP-binding protein Era [Staphylococcus epidermidis ATCC 12228]
gi|251810984|ref|ZP_04825457.1| GTP-binding protein Era [Staphylococcus epidermidis BCM-HMP0060]
gi|282876007|ref|ZP_06284874.1| GTP-binding protein Era [Staphylococcus epidermidis SK135]
gi|293366472|ref|ZP_06613149.1| GTP-binding protein Era [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417647011|ref|ZP_12296860.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU144]
gi|417655966|ref|ZP_12305657.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU028]
gi|417659631|ref|ZP_12309231.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU045]
gi|417908663|ref|ZP_12552420.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU037]
gi|417912203|ref|ZP_12555898.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU105]
gi|417913713|ref|ZP_12557376.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU109]
gi|418325625|ref|ZP_12936831.1| GTP-binding protein Era [Staphylococcus epidermidis VCU071]
gi|418328382|ref|ZP_12939497.1| GTP-binding protein Era [Staphylococcus epidermidis 14.1.R1.SE]
gi|418606698|ref|ZP_13169968.1| GTP-binding protein Era [Staphylococcus epidermidis VCU057]
gi|418609422|ref|ZP_13172574.1| GTP-binding protein Era [Staphylococcus epidermidis VCU065]
gi|418621370|ref|ZP_13184146.1| GTP-binding protein Era [Staphylococcus epidermidis VCU123]
gi|418625271|ref|ZP_13187924.1| GTP-binding protein Era [Staphylococcus epidermidis VCU125]
gi|418629390|ref|ZP_13191898.1| GTP-binding protein Era [Staphylococcus epidermidis VCU127]
gi|418630474|ref|ZP_13192955.1| GTP-binding protein Era [Staphylococcus epidermidis VCU128]
gi|418665173|ref|ZP_13226623.1| GTP-binding protein Era [Staphylococcus epidermidis VCU081]
gi|419769466|ref|ZP_14295560.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771680|ref|ZP_14297726.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-K]
gi|420163061|ref|ZP_14669808.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM095]
gi|420165560|ref|ZP_14672251.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM088]
gi|420167964|ref|ZP_14674616.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM087]
gi|420170276|ref|ZP_14676837.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM070]
gi|420172620|ref|ZP_14679119.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM067]
gi|420184540|ref|ZP_14690649.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM040]
gi|420187229|ref|ZP_14693250.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM039]
gi|420197447|ref|ZP_14703171.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM020]
gi|420201697|ref|ZP_14707307.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM018]
gi|420206114|ref|ZP_14711624.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM008]
gi|420209073|ref|ZP_14714511.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM003]
gi|420211230|ref|ZP_14716604.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM001]
gi|420221646|ref|ZP_14726573.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH08001]
gi|420225764|ref|ZP_14730591.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH06004]
gi|420227355|ref|ZP_14732125.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05003]
gi|420229671|ref|ZP_14734376.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04003]
gi|421606938|ref|ZP_16048189.1| GTPase Era [Staphylococcus epidermidis AU12-03]
gi|38257330|sp|Q8CP21.1|ERA_STAES RecName: Full=GTPase Era
gi|27315718|gb|AAO04853.1|AE016748_87 GTP-binding protein (Era/TrmE family) [Staphylococcus epidermidis
ATCC 12228]
gi|251805494|gb|EES58151.1| GTP-binding protein Era [Staphylococcus epidermidis BCM-HMP0060]
gi|281295032|gb|EFA87559.1| GTP-binding protein Era [Staphylococcus epidermidis SK135]
gi|291319241|gb|EFE59610.1| GTP-binding protein Era [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329725360|gb|EGG61843.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU144]
gi|329735268|gb|EGG71560.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU045]
gi|329737216|gb|EGG73470.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU028]
gi|341651214|gb|EGS75019.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU105]
gi|341654735|gb|EGS78473.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU109]
gi|341656024|gb|EGS79747.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU037]
gi|365228227|gb|EHM69412.1| GTP-binding protein Era [Staphylococcus epidermidis VCU071]
gi|365232040|gb|EHM73053.1| GTP-binding protein Era [Staphylococcus epidermidis 14.1.R1.SE]
gi|374407474|gb|EHQ78336.1| GTP-binding protein Era [Staphylococcus epidermidis VCU057]
gi|374407636|gb|EHQ78488.1| GTP-binding protein Era [Staphylococcus epidermidis VCU065]
gi|374409148|gb|EHQ79948.1| GTP-binding protein Era [Staphylococcus epidermidis VCU081]
gi|374825413|gb|EHR89349.1| GTP-binding protein Era [Staphylococcus epidermidis VCU125]
gi|374829314|gb|EHR93118.1| GTP-binding protein Era [Staphylococcus epidermidis VCU123]
gi|374834093|gb|EHR97753.1| GTP-binding protein Era [Staphylococcus epidermidis VCU127]
gi|374837664|gb|EHS01227.1| GTP-binding protein Era [Staphylococcus epidermidis VCU128]
gi|383358085|gb|EID35546.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360499|gb|EID37894.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-K]
gi|394234750|gb|EJD80324.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM095]
gi|394235361|gb|EJD80933.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM088]
gi|394237992|gb|EJD83478.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM087]
gi|394240614|gb|EJD86037.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM070]
gi|394241781|gb|EJD87190.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM067]
gi|394256208|gb|EJE01141.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM039]
gi|394257191|gb|EJE02113.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM040]
gi|394266254|gb|EJE10900.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM020]
gi|394271965|gb|EJE16444.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM018]
gi|394277953|gb|EJE22270.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM008]
gi|394279301|gb|EJE23609.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM003]
gi|394281683|gb|EJE25909.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM001]
gi|394290272|gb|EJE34136.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH08001]
gi|394293198|gb|EJE36921.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH06004]
gi|394297224|gb|EJE40831.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05003]
gi|394298965|gb|EJE42520.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04003]
gi|406657407|gb|EKC83795.1| GTPase Era [Staphylococcus epidermidis AU12-03]
Length = 299
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP + +S+HP
Sbjct: 127 VHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDNQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ GY
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGY 294
>gi|182418397|ref|ZP_02949691.1| GTP-binding protein Era [Clostridium butyricum 5521]
gi|237666582|ref|ZP_04526567.1| GTP-binding protein Era [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377779|gb|EDT75323.1| GTP-binding protein Era [Clostridium butyricum 5521]
gi|237657781|gb|EEP55336.1| GTP-binding protein Era [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 296
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G ++QM+ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDFQMVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + + D ++ L + C+ + D + E + K P+ VLNK D
Sbjct: 67 HKLGEFMVNSAKESTKDVDLVLFLTNPCEEIGKGDRFILETLKGKK--CPVFFVLNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+AK LE + K + E++P+SA G V+ + D + +P GP YYP D++++
Sbjct: 125 NTQDRVAKTLEMFSKEFEFAEIVPISAIKGKNVDALLDLMKKSMPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F + EI+REK R+EVP+ V+++ K I+V+++ EK+S K I+IGK
Sbjct: 185 EKFVISEIVREKALRTLRDEVPHGIAVDILQMKQNERGTYHIEVDLICEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + +R +IE FL+ KV ++I VKV++ WR ++ LLK GY
Sbjct: 245 NGQTLKRIGETSRYEIEKFLRAKVNIKIWVKVRKEWRDNQNLLKELGY 292
>gi|407706827|ref|YP_006830412.1| protein-export membrane protein SecDF [Bacillus thuringiensis MC28]
gi|423377842|ref|ZP_17355126.1| GTPase Era [Bacillus cereus BAG1O-2]
gi|423448882|ref|ZP_17425761.1| GTPase Era [Bacillus cereus BAG5O-1]
gi|423541367|ref|ZP_17517758.1| GTPase Era [Bacillus cereus HuB4-10]
gi|423547603|ref|ZP_17523961.1| GTPase Era [Bacillus cereus HuB5-5]
gi|423612511|ref|ZP_17588372.1| GTPase Era [Bacillus cereus VD107]
gi|423615358|ref|ZP_17591192.1| GTPase Era [Bacillus cereus VD115]
gi|423622612|ref|ZP_17598390.1| GTPase Era [Bacillus cereus VD148]
gi|401129476|gb|EJQ37159.1| GTPase Era [Bacillus cereus BAG5O-1]
gi|401172555|gb|EJQ79776.1| GTPase Era [Bacillus cereus HuB4-10]
gi|401179324|gb|EJQ86497.1| GTPase Era [Bacillus cereus HuB5-5]
gi|401246100|gb|EJR52452.1| GTPase Era [Bacillus cereus VD107]
gi|401260732|gb|EJR66900.1| GTPase Era [Bacillus cereus VD148]
gi|401261037|gb|EJR67204.1| GTPase Era [Bacillus cereus VD115]
gi|401636108|gb|EJS53862.1| GTPase Era [Bacillus cereus BAG1O-2]
gi|407384512|gb|AFU15013.1| GTP-binding protein Era [Bacillus thuringiensis MC28]
Length = 301
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNATEGFGRGEEFIIEKLQETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLELIDQYRKLHEFAEIVPISALDGNNVEALIGAIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|347753168|ref|YP_004860733.1| GTP-binding protein Era [Bacillus coagulans 36D1]
gi|347585686|gb|AEP01953.1| GTP-binding protein Era [Bacillus coagulans 36D1]
Length = 302
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 179/290 (61%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST NQ++GQK++I+++KPQTTR++I G+ + + QMI DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFINQVVGQKIAIMSDKPQTTRNKIQGVYTADDAQMIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ D I+ +V+A + R DE + E + + P+ LV+NK DL
Sbjct: 71 HKLGDFMVKSATDTLKEVDLILFMVNAEEKRGRGDEYIIELL--KHVRTPVFLVINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y+ EV+P+SA G+ V + D I LP GP YYP D V++HP
Sbjct: 129 VHPDDLLAFIEQYKDLYPFREVVPISALGGNNVSRLLDTIKAYLPEGPQYYPADQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF + E+IREK R EVP++ V V+ R KD I V IVVE+ SQK I+I
Sbjct: 189 ERFIISELIREKALQLTREEVPHSIAV-VIEKMEREENKDVIHVMATIVVERPSQKGIII 247
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ G LK + AR DIE+ L +VYLE+ VKV+++WR L+ +G+
Sbjct: 248 GRQGSMLKEIGKRARADIENLLGSQVYLELWVKVQKDWRNKISQLRDFGF 297
>gi|225011396|ref|ZP_03701834.1| GTP-binding protein Era [Flavobacteria bacterium MS024-2A]
gi|225003899|gb|EEG41871.1| GTP-binding protein Era [Flavobacteria bacterium MS024-2A]
Length = 296
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 181/297 (60%), Gaps = 23/297 (7%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G PNVGKSTL N ++G++LSI+T K QTTRHRILGI +G ++QM+L DTPG+I+
Sbjct: 12 SIVGNPNVGKSTLMNALVGKELSIITAKAQTTRHRILGIINGDDFQMVLSDTPGVIKPAY 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M S MM V+ A I+ D +V LV + + E DE L E + K K P+L+++NK DL
Sbjct: 72 EMQTS-MMNFVKEALIDGDVLVYLV-SPEETELKDEKLFEKI--KKTKAPLLILINKIDL 127
Query: 235 IKPGEI-AKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
I + A L W +F V P+SA G V ++ D ++ LP PAY+PKD +++
Sbjct: 128 ISQEALEASVLHWQTEFPKAT-VYPISALTGFFVPELLDILIGHLPESPAYFPKDQLTDK 186
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--------IQVEIVVEKN 345
PERFFV E IRE+I Y E+PYA +V +DF I+ I+VE+
Sbjct: 187 PERFFVNESIREQILELYSKEIPYAVEV---------VTEDFLEDSKIIKIRSVIMVERE 237
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+QK I+IG G ALK + AR +E F K+++LE+ VKV +NWR + LK +GY
Sbjct: 238 TQKGIIIGHKGSALKRVGIGARKSLEAFFGKQIHLELYVKVSKNWRTNSQQLKRFGY 294
>gi|392957207|ref|ZP_10322731.1| GTPase [Bacillus macauensis ZFHKF-1]
gi|391876614|gb|EIT85210.1| GTPase [Bacillus macauensis ZFHKF-1]
Length = 302
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI + K
Sbjct: 12 SIIGRPNVGKSTLLNHIIGQKIAIMSDKPQTTRNKIQGVYTTEDAQVVFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M K + D I+ +V+A + R D+ + + + + D+ P+ LV+NK D
Sbjct: 71 HRLGDFMTKIAQQTLREVDLILFVVNAEEGYGRGDQFIIDKL-EQIDQ-PVFLVINKIDT 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ +E+Y +V EVIP+SA G+ V + I L GP YYP+D V++HP
Sbjct: 129 ITPDKLFPLIEFYSSKINVQEVIPISALQGNNVNTLMTQITNYLEEGPQYYPEDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFIQVEIVVEKNSQKIILIG 353
ERF GE+IREK+ R EVP++ V + KTR FI ++VE+ SQK I+IG
Sbjct: 189 ERFIAGELIREKVLHLTREEVPHSIAVVIEEMKTREERNVVFIHATVIVERKSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE+ L KV+LE+ VKV+ +WR LK +G+
Sbjct: 249 KQGSMLKEIGKRARTDIENLLGSKVFLELFVKVQNDWRNKLSNLKEFGF 297
>gi|253576082|ref|ZP_04853414.1| GTP-binding protein Era [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844425|gb|EES72441.1| GTP-binding protein Era [Paenibacillus sp. oral taxon 786 str. D14]
Length = 300
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + E Q++ DTPGI +++
Sbjct: 12 AIVGRPNVGKSTLMNHIIGQKIAIMSDKPQTTRNKIHGVYTSEEMQIVFLDTPGIHKRQS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M + + G + ++ LVDA + D + E + D + P++LVLNK D
Sbjct: 72 KLGDYMNTTALNTLG-EVEAVLFLVDAAEGLGGGDRFIIERLKDVRT--PVILVLNKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++P ++ +E Y K E++P+SA G+ V + + I LP GP YYP+D V++HP
Sbjct: 129 VEPEQLLPLIEEYSKLYPFSEIVPISAMLGNNVNRLLEQIGKYLPEGPQYYPEDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI R EVP++ V + + + +I I VE++SQK I+IGK
Sbjct: 189 EQFVCAELIREKILHLTREEVPHSIAVTIEDMRVQENGVVYISAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE+ L K++LE+ VKVK++WR E +LK G+
Sbjct: 249 QGALLKEVGKLARQDIENLLGSKIFLELWVKVKKDWRNQERILKDLGF 296
>gi|199599319|ref|ZP_03212717.1| GTPase [Lactobacillus rhamnosus HN001]
gi|258508545|ref|YP_003171296.1| GTP-binding protein era [Lactobacillus rhamnosus GG]
gi|385828207|ref|YP_005865979.1| GTP-binding protein Era [Lactobacillus rhamnosus GG]
gi|418070731|ref|ZP_12708006.1| GTPase Era [Lactobacillus rhamnosus R0011]
gi|199589758|gb|EDY97866.1| GTPase [Lactobacillus rhamnosus HN001]
gi|257148472|emb|CAR87445.1| GTP-binding protein era [Lactobacillus rhamnosus GG]
gi|259649852|dbj|BAI42014.1| GTP-binding protein Era [Lactobacillus rhamnosus GG]
gi|357540151|gb|EHJ24168.1| GTPase Era [Lactobacillus rhamnosus R0011]
Length = 300
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 185/300 (61%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 222
+ K + LD M K S D I+ +V A DE ++G GD + K
Sbjct: 65 HKPK-NELDDYMDKAALSTLNQVDAILFMVAA-------DE--QKGAGDAYILRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L+LNK DL+KP ++ +E Y+ +V P+SA G+ V+++ + + LP GP
Sbjct: 115 KPVYLILNKIDLVKPDDLLPLIESYQHDYHFAQVFPISATMGNNVDELLNSLTATLPEGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|334339735|ref|YP_004544715.1| GTP-binding protein Era [Desulfotomaculum ruminis DSM 2154]
gi|334091089|gb|AEG59429.1| GTP-binding protein Era [Desulfotomaculum ruminis DSM 2154]
Length = 302
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 176/287 (61%), Gaps = 3/287 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++KPQTTRH+I + S + Q+I DTPGI K
Sbjct: 14 ALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLSRNDAQIIFLDTPGI-HKPR 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L ++ A D ++ L +A P D+ + E + K P+ L+LNK DL
Sbjct: 73 HKLGEHLVDVALGALKEVDVVLFLAEASDPPGAGDQYIAEQLKGLKT--PVFLLLNKIDL 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
IK EI +++ Y+ E++PVSA G V+ + D I+ LP GP YYP ++V++ P
Sbjct: 131 IKKEEILERIHQYKDLAPFAEIVPVSALAGENVDRLIDVIIRYLPEGPQYYPAEMVTDRP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + EI+REK+ E+P++ V V + R + I E++SQK ILIGK
Sbjct: 191 ERFIMAEIVREKVLHLTSEEIPHSVAVVVEQMQKRSNGLVAVNAVIYTERDSQKAILIGK 250
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
GGK LK + AR +IE+ L KVYLE+ VKVK++WR G LK++G
Sbjct: 251 GGKMLKEVGRRAREEIENLLGSKVYLELWVKVKKDWRNKVGDLKNFG 297
>gi|403384164|ref|ZP_10926221.1| GTP-binding protein Era [Kurthia sp. JC30]
Length = 300
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTQDDAQMIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M K ++A D I+ +V+A + D+ + E + K P+ L++NK D
Sbjct: 69 HKLGEFMSKVSKNALREVDVIMFMVNAQQKLGAGDKYVIEML--KGTKTPVFLIINKIDT 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ K ++ Y++ D E++P+SA G+ V+++ + LP GP YYP D V++HP
Sbjct: 127 IHPDEVWKIVDSYKEEYDFAEIVPISALQGNNVDNLLTTLKKYLPEGPQYYPADQVTDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IREK R+EVP++ V + + T + + I++E++SQK I+IG
Sbjct: 187 ERFIISELIREKALHLTRDEVPHSIAVEIEKIRRDEETGRVNVNATIIIERDSQKGIIIG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + T AR DIE+ L KVYLE+ VKV+++WR L+ YGY
Sbjct: 247 KRGAMLKEIGTRARKDIENLLGSKVYLELWVKVQKDWRDRASQLRDYGY 295
>gi|340621136|ref|YP_004739587.1| GTP-binding protein era-like protein [Capnocytophaga canimorsus
Cc5]
gi|339901401|gb|AEK22480.1| GTP-binding protein era-like protein [Capnocytophaga canimorsus
Cc5]
Length = 293
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 185/290 (63%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQIVFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + + D + +K +P+LL++NK D
Sbjct: 68 YELQNSMMDFVKSAFEDADILIYMVEVGEKQLKDDLFFAK---INKMNIPVLLLINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +++ ++++ EV P+SA G ++ + I+ LP PA++PKD +++ P
Sbjct: 125 SSQEVLEEQVAYWKEQVPKAEVFPISALAGFQTNEVFNRIIELLPESPAFFPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV EIIREKI + Y+ E+PYA +V S+ ++ I + I+VE+ +QK I+I
Sbjct: 185 ERFFVNEIIREKILLNYKKEIPYAVEVETESF---VDSEHIIHIRSVIMVERETQKGIII 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+ALK + T AR D+E F K+V++ I VKV ++WR + L+ +GY
Sbjct: 242 GHKGEALKKVGTQARTDLEKFFGKQVHITIFVKVNKDWRSNARQLRRFGY 291
>gi|423395400|ref|ZP_17372601.1| GTPase Era [Bacillus cereus BAG2X1-1]
gi|423406275|ref|ZP_17383424.1| GTPase Era [Bacillus cereus BAG2X1-3]
gi|401654811|gb|EJS72350.1| GTPase Era [Bacillus cereus BAG2X1-1]
gi|401660269|gb|EJS77751.1| GTPase Era [Bacillus cereus BAG2X1-3]
Length = 301
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLQETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLELIDQYRKLYEFAEIVPISALDGNNVEALIGTIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERPSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIESLLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|30264370|ref|NP_846747.1| GTP-binding protein Era [Bacillus anthracis str. Ames]
gi|47529821|ref|YP_021170.1| GTP-binding protein Era [Bacillus anthracis str. 'Ames Ancestor']
gi|49187195|ref|YP_030447.1| GTP-binding protein Era [Bacillus anthracis str. Sterne]
gi|65321672|ref|ZP_00394631.1| COG1159: GTPase [Bacillus anthracis str. A2012]
gi|165872076|ref|ZP_02216716.1| GTP-binding protein Era [Bacillus anthracis str. A0488]
gi|167634499|ref|ZP_02392819.1| GTP-binding protein Era [Bacillus anthracis str. A0442]
gi|167638699|ref|ZP_02396975.1| GTP-binding protein Era [Bacillus anthracis str. A0193]
gi|170687400|ref|ZP_02878617.1| GTP-binding protein Era [Bacillus anthracis str. A0465]
gi|170707479|ref|ZP_02897933.1| GTP-binding protein Era [Bacillus anthracis str. A0389]
gi|177653279|ref|ZP_02935531.1| GTP-binding protein Era [Bacillus anthracis str. A0174]
gi|190566974|ref|ZP_03019890.1| GTP-binding protein Era [Bacillus anthracis str. Tsiankovskii-I]
gi|227817076|ref|YP_002817085.1| GTP-binding protein Era [Bacillus anthracis str. CDC 684]
gi|229602326|ref|YP_002868589.1| GTP-binding protein Era [Bacillus anthracis str. A0248]
gi|254684057|ref|ZP_05147917.1| GTP-binding protein Era [Bacillus anthracis str. CNEVA-9066]
gi|254736405|ref|ZP_05194111.1| GTP-binding protein Era [Bacillus anthracis str. Western North
America USA6153]
gi|254741443|ref|ZP_05199130.1| GTP-binding protein Era [Bacillus anthracis str. Kruger B]
gi|254750881|ref|ZP_05202920.1| GTP-binding protein Era [Bacillus anthracis str. Vollum]
gi|254757791|ref|ZP_05209818.1| GTP-binding protein Era [Bacillus anthracis str. Australia 94]
gi|386738189|ref|YP_006211370.1| GTP-binding protein Era [Bacillus anthracis str. H9401]
gi|421506555|ref|ZP_15953478.1| GTPase Era [Bacillus anthracis str. UR-1]
gi|421638376|ref|ZP_16078972.1| GTPase Era [Bacillus anthracis str. BF1]
gi|30259028|gb|AAP28233.1| GTP-binding protein Era [Bacillus anthracis str. Ames]
gi|47504969|gb|AAT33645.1| GTP-binding protein Era [Bacillus anthracis str. 'Ames Ancestor']
gi|49181122|gb|AAT56498.1| GTP-binding protein Era [Bacillus anthracis str. Sterne]
gi|164712207|gb|EDR17744.1| GTP-binding protein Era [Bacillus anthracis str. A0488]
gi|167513547|gb|EDR88917.1| GTP-binding protein Era [Bacillus anthracis str. A0193]
gi|167529951|gb|EDR92686.1| GTP-binding protein Era [Bacillus anthracis str. A0442]
gi|170127723|gb|EDS96596.1| GTP-binding protein Era [Bacillus anthracis str. A0389]
gi|170668595|gb|EDT19341.1| GTP-binding protein Era [Bacillus anthracis str. A0465]
gi|172081561|gb|EDT66633.1| GTP-binding protein Era [Bacillus anthracis str. A0174]
gi|190561965|gb|EDV15934.1| GTP-binding protein Era [Bacillus anthracis str. Tsiankovskii-I]
gi|227004139|gb|ACP13882.1| GTP-binding protein Era [Bacillus anthracis str. CDC 684]
gi|229266734|gb|ACQ48371.1| GTP-binding protein Era [Bacillus anthracis str. A0248]
gi|384388041|gb|AFH85702.1| GTP-binding protein Era [Bacillus anthracis str. H9401]
gi|401823548|gb|EJT22695.1| GTPase Era [Bacillus anthracis str. UR-1]
gi|403394802|gb|EJY92042.1| GTPase Era [Bacillus anthracis str. BF1]
Length = 301
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K D E++P+SA G+ E + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLELIDQYRKLHDFAEIVPISALDGNNAEALIGTIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERPSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|229552355|ref|ZP_04441080.1| GTP-binding protein Era [Lactobacillus rhamnosus LMS2-1]
gi|258539726|ref|YP_003174225.1| GTP-binding protein era [Lactobacillus rhamnosus Lc 705]
gi|385835375|ref|YP_005873149.1| GTP-binding protein Era [Lactobacillus rhamnosus ATCC 8530]
gi|229314337|gb|EEN80310.1| GTP-binding protein Era [Lactobacillus rhamnosus LMS2-1]
gi|257151402|emb|CAR90374.1| GTP-binding protein era [Lactobacillus rhamnosus Lc 705]
gi|355394866|gb|AER64296.1| GTP-binding protein Era [Lactobacillus rhamnosus ATCC 8530]
Length = 300
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 185/300 (61%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 222
+ K + LD M K S D I+ +V A DE ++G GD + K
Sbjct: 65 HKPK-NELDDYMDKAALSTLNQVDAILFMVAA-------DE--QKGAGDAYILRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L+LNK DL+KP ++ +E Y+ +V P+SA G+ V+++ + + LP GP
Sbjct: 115 KPVYLILNKIDLVKPDDLLPLIESYQHDYHFAQVFPISATMGNSVDELLNSLTGTLPEGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|89891790|ref|ZP_01203292.1| GTP-binding protein [Flavobacteria bacterium BBFL7]
gi|89515945|gb|EAS18610.1| GTP-binding protein [Flavobacteria bacterium BBFL7]
Length = 300
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 192/293 (65%), Gaps = 9/293 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q++L DTPGII K
Sbjct: 13 NIVGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGEDFQIVLSDTPGII-KPA 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM+ V++A +ADCI+ +V+ + E +E E+ + ++P+++++NK D
Sbjct: 72 YKLQESMMEFVKNAFEDADCILYMVELGEK-ELKNEAFEKRLT--YAEVPVIVLINKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + +E ++ E+ +SA GV + I+ LP PA+YPKD +++ P
Sbjct: 129 GQASQLEEAVEHWKVRLPNAEIFAISALENFGVPQLMARIVEILPASPAFYPKDALTDKP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV E IREKI + Y+ E+PY+ +++ + +D I++ I+VE+ +QK I+I
Sbjct: 189 ERFFVNESIREKILIHYKKEIPYSVEIDTEEF---FEDEDIIRIRSVIMVERETQKGIII 245
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G G A+K + T AR D++ F K+V++E+ VKV +NWR +E L+ +GY G+
Sbjct: 246 GHKGAAIKRVGTEARKDLQKFFGKQVHIELYVKVNKNWRSNEKQLRRFGYKGE 298
>gi|308069928|ref|YP_003871533.1| GTP-binding protein [Paenibacillus polymyxa E681]
gi|305859207|gb|ADM70995.1| GTP-binding protein, era-like (Bex protein) [Paenibacillus polymyxa
E681]
Length = 300
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI +++
Sbjct: 12 AIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVFTTEDTQIVFLDTPGIHKRQS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M + G + ++ L+DA + D + E + + K P++LVLNK D
Sbjct: 72 KLGDYMNQTAFNTLG-EVEAVLFLIDAAEGLGGGDRFIAEQL--KQVKTPVILVLNKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+P + +E Y K D E+IP+SAK G+ V + + + LP GP YYP D +++HP
Sbjct: 129 IEPEALLPLIEQYRKLYDFAEIIPISAKMGNNVNTLLEQVQKYLPEGPQYYPDDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F + E++REKI R EVP++ V + K + I I VE++SQK I+IGK
Sbjct: 189 EQFVISELVREKILHMTREEVPHSIAVMIEDMKVQDNGVVHIMAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DI++ L K++LE+ VKVK++WR E +L+ G+
Sbjct: 249 QGAMLKEVGKQARQDIQNLLGSKIFLELWVKVKKDWRNQERVLRDLGF 296
>gi|423470517|ref|ZP_17447261.1| GTPase Era [Bacillus cereus BAG6O-2]
gi|402436183|gb|EJV68215.1| GTPase Era [Bacillus cereus BAG6O-2]
Length = 301
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNATEGFGRGEEFIIEKLQETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++ Y K + E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLALIDQYRKLHEFAEIVPISALDGNNVEALIGAIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|451817762|ref|YP_007453963.1| GTPase Era [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451783741|gb|AGF54709.1| GTPase Era [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 296
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 180/291 (61%), Gaps = 3/291 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQM+ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGEDYQMVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVLNK D
Sbjct: 67 HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDKK--CPVFLVLNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+AK L+ Y + E+IP+SA G V+ + + + +P GP YYP D++++
Sbjct: 125 STQDRVAKSLQMYAEEFKFAEIIPISAIKGKNVDKLLELMKNSMPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K I+IGK
Sbjct: 185 EKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEKGTYHIEVDLICEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G+ LK + AR ++E FL+ KV ++I VKV++ WR ++ LLK GY +
Sbjct: 245 NGQTLKRIGETARYELERFLRSKVNVKIWVKVRKEWRDNQNLLKELGYKAK 295
>gi|339010532|ref|ZP_08643102.1| GTPase Era [Brevibacillus laterosporus LMG 15441]
gi|421873899|ref|ZP_16305508.1| GTP-binding protein Era [Brevibacillus laterosporus GI-9]
gi|338772687|gb|EGP32220.1| GTPase Era [Brevibacillus laterosporus LMG 15441]
gi|372457010|emb|CCF15057.1| GTP-binding protein Era [Brevibacillus laterosporus GI-9]
Length = 305
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL NQ++GQK++I++NKPQTTR++I + + + Q I DTPGI + K
Sbjct: 16 SIIGRPNVGKSTLLNQVVGQKVAIMSNKPQTTRNQIRAVYTSDKGQFIFIDTPGIHKAKS 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+ + D ++ ++DA + +E + E + K P+ LV+NK D
Sbjct: 76 KLGDYMVAAAENTLN-EVDLVLFVIDATEKRGAGEEYILERL--KKVNTPVFLVINKIDQ 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ ++ Y K D +++P+SA G+ + + IL ++P GP YYP D V++HP
Sbjct: 133 IHPEELLPLIDEYRKHHDFKQIVPISALQGNNTDALLQSILLEMPEGPMYYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V K K +I I VE++SQK ILIG
Sbjct: 193 ERFIVAELIREKVLHLTREEIPHSIAVTVEEMKRGENGKTLYIYAAIYVERDSQKGILIG 252
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK ++ AR+D+E L +K++LE+ VKVK++WR E +L+++G+
Sbjct: 253 KRGDMLKEISKRARMDMERLLGEKIFLEVWVKVKKDWRNQERMLRNFGF 301
>gi|270291317|ref|ZP_06197539.1| GTP-binding protein Era [Pediococcus acidilactici 7_4]
gi|304385067|ref|ZP_07367413.1| GTP-binding protein Era [Pediococcus acidilactici DSM 20284]
gi|418069351|ref|ZP_12706629.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|427441999|ref|ZP_18925497.1| GTP-binding protein Era [Pediococcus lolii NGRI 0510Q]
gi|270280163|gb|EFA25999.1| GTP-binding protein Era [Pediococcus acidilactici 7_4]
gi|304329261|gb|EFL96481.1| GTP-binding protein Era [Pediococcus acidilactici DSM 20284]
gi|357536820|gb|EHJ20848.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|425786867|dbj|GAC46285.1| GTP-binding protein Era [Pediococcus lolii NGRI 0510Q]
Length = 304
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 187/303 (61%), Gaps = 6/303 (1%)
Query: 102 IEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 161
+EE A H +++G+PNVGKST N ++GQK++I+++ PQTTR++I GI + Q+
Sbjct: 1 MEENKQAFHSGFVAIVGRPNVGKSTFLNYVVGQKVAIMSDVPQTTRNKIQGIYTTDREQI 60
Query: 162 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 221
+ DTPGI K + L M+++ S+ D ++ +V+A + D + E + K+
Sbjct: 61 VFIDTPGI-HKAHNKLGDFMVQSAISSLNEVDAVMFMVNADQKRGAGDNYIIERLKKIKN 119
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
+ PI LV+NK DL+ P E+ ++ Y D EV P+SA G+ + ++ + ++P G
Sbjct: 120 R-PIYLVINKIDLVHPDELLPIVDSYRDALDWTEVFPISALQGNNINELLATLSKQMPEG 178
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE-- 339
P YYP D V++HPERF V E+IREK+ R EVP++ V + S K P D + +
Sbjct: 179 PQYYPSDQVTDHPERFVVSELIREKVLQLTRQEVPHSVAVVIESMK--PGKDDLVDISAT 236
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I+V++ +QK I+IGKGG+ LK + + AR+DIE L +VYLE+ VKV E WR +G+L+
Sbjct: 237 IIVDRPTQKGIIIGKGGRMLKEIGSRARVDIEHLLGSRVYLELWVKVSEGWRDKQGILQS 296
Query: 400 YGY 402
+GY
Sbjct: 297 FGY 299
>gi|255533658|ref|YP_003094030.1| GTP-binding protein Era [Pedobacter heparinus DSM 2366]
gi|255346642|gb|ACU05968.1| GTP-binding protein Era [Pedobacter heparinus DSM 2366]
Length = 295
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 186/293 (63%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPNVGKSTL N ++G+KLSI+T K QTTRHRILGI + YQ++ DTPGII K +
Sbjct: 9 SIIGKPNVGKSTLMNALVGEKLSIITPKAQTTRHRILGIVNEESYQIVFSDTPGII-KPL 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM +V+ A +AD I+ + D + + +++LE+ ++P++++LNK D
Sbjct: 68 YGLQDSMMNSVKGALTDADLILFVTDINEQHDE-NDVLEKITN---TEIPLVVLLNKIDN 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +K+ ++++ + + +SA + + +E I +L LP +Y K+ +++
Sbjct: 124 ATQEQVDEKVAYWQEKLNPKHIFAISALHQYNLEGIMSMVLDYLPEHAPFYDKEDLTDRS 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-----KTRPTAKDFIQVEIVVEKNSQKI 349
+RFFV EIIREKIF Y+ E+PY+ +V V ++ K+ P + I EIVVE++SQK
Sbjct: 184 QRFFVSEIIREKIFFNYKKEIPYSTEVIVTAFKEEQSKSGPMVR--ITAEIVVERDSQKN 241
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIG GG LK + +R DIE FL +KV+LE VKV +WR + LK +GY
Sbjct: 242 ILIGTGGAMLKKVGMESRKDIEKFLDQKVFLETFVKVIPDWRSKKNYLKSFGY 294
>gi|299535811|ref|ZP_07049132.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis
ZC1]
gi|424735372|ref|ZP_18163836.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis
ZB2]
gi|298729011|gb|EFI69565.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis
ZC1]
gi|422950574|gb|EKU44942.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis
ZB2]
Length = 305
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 183/290 (63%), Gaps = 5/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI DTPGI + K
Sbjct: 14 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTDDSQMIFIDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D I+ +V+A + + DE + E + + P+ LV+NK D
Sbjct: 73 HKLGDFMLKVSKNTLREVDVIMFMVNAEQKLGKGDEFILEMLAG--NPTPVFLVINKIDA 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ +E Y++ D E++P+SA G+ VE++ + LP GP YYP D V++HP
Sbjct: 131 IHPDELMGIIESYKERYDFAEIVPISALQGNNVENLLVTLAKYLPEGPQYYPADQVTDHP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF + E+IREK+ R E+P++ V + + +D I V I+VE++SQK I+I
Sbjct: 191 ERFIISELIREKVLHLTREEIPHSIAVVIDKIRRDEENEDKIHVAATIIVERDSQKGIVI 250
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + T AR DIE L KVYLE+ VKV+++WR L+ +G+
Sbjct: 251 GKRGALLKEVGTRARKDIEMLLGSKVYLELWVKVQKDWRNKATHLRDFGF 300
>gi|404451047|ref|ZP_11016021.1| GTPase Era [Indibacter alkaliphilus LW1]
gi|403763340|gb|EJZ24308.1| GTPase Era [Indibacter alkaliphilus LW1]
Length = 296
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 188/289 (65%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + YQ++ DTPG+++ K
Sbjct: 12 NIVGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIINDDAYQIVFSDTPGMLKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V + +AD I+ + D + I++++E+ ++ +P+LLV+NK DL
Sbjct: 71 YELHKNMMGFVNMSLEDADVILFVTDLFETDAEIEDVIEK---INQSGVPVLLVINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
K ++ + ++ + + VIP+SA E I IL +LP P +Y K+ +++ P
Sbjct: 128 SKENQLEEVTAYWTQRIKAETVIPISATESFNTERILIEILERLPQHPPFYDKEELTDKP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVS-YKTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERFF EI+REKIF+ Y+ E+PY+ +V + Y+ + ++ I VE+ SQK I+IG
Sbjct: 188 ERFFASEIVREKIFLNYKKEIPYSTEVAIEDFYEDEKIIR--VRAIIYVERKSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+GGKALK + AR ++E F KK++LE VKV+++WR+++ L+ +GY
Sbjct: 246 EGGKALKRVGIQAREEMEKFFGKKIFLETFVKVEDDWRKNKNKLRKFGY 294
>gi|374385578|ref|ZP_09643081.1| GTP-binding protein Era [Odoribacter laneus YIT 12061]
gi|373225280|gb|EHP47614.1| GTP-binding protein Era [Odoribacter laneus YIT 12061]
Length = 293
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 183/295 (62%), Gaps = 9/295 (3%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
NHKS ++G PNVGKSTL N+++G+K+SI+T+K QTTRHRI GI + +Q++ DTP
Sbjct: 2 NHKSGFVNIIGNPNVGKSTLMNRLVGEKISIITSKSQTTRHRIKGIVNDENFQIVFSDTP 61
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
G++ K + + M++ +SA +AD I+ + D + + ++ +E+ + PILL
Sbjct: 62 GVV-KPSYKMQECMLEFSKSALTDADIILYVTDVVEDMLKNNDFIEQV---KRSAAPILL 117
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK DL ++ + ++ E+ PVSA V+ + IL LP G ++PK
Sbjct: 118 VINKIDLTTQEKLEDLFDKWKSLLPQAEIFPVSATENFNVDHLYQRILELLPEGEPFFPK 177
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++ P RFFV EIIREKI + Y E+PY+ +V V +K + + V I VE++SQ
Sbjct: 178 DELTDLPARFFVNEIIREKILLNYEREIPYSVEVAVEEFKEDAKRINIMAV-IYVERDSQ 236
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IG+ G ALK + T ARLDIE F K V+L + VKV+++WR + LK++GY
Sbjct: 237 KGIIIGRQGAALKKVGTEARLDIEKFFGKSVFLNLYVKVQKDWRSKDKDLKNFGY 291
>gi|423452396|ref|ZP_17429249.1| GTPase Era [Bacillus cereus BAG5X1-1]
gi|423483883|ref|ZP_17460573.1| GTPase Era [Bacillus cereus BAG6X1-2]
gi|401140034|gb|EJQ47591.1| GTPase Era [Bacillus cereus BAG5X1-1]
gi|401141434|gb|EJQ48989.1| GTPase Era [Bacillus cereus BAG6X1-2]
Length = 301
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNATEGYGRGEEFIIEKLQETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLELIDQYRKLYEFAEIVPISALDGNNVEALIGAIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|339448298|ref|ZP_08651854.1| GTPase [Lactobacillus fructivorans KCTC 3543]
Length = 302
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 180/295 (61%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I++ K QTTR++I GI + + Q++ DTPGI + K
Sbjct: 13 AIVGRPNVGKSTFLNRVIGQKVAIMSEKAQTTRNKIQGIYTTDDAQIVFIDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK--DKL-----PILL 227
+ LD M + S+ D ++ +V A + G GD+ D+L P+ L
Sbjct: 72 NKLDDYMDEAALSSLKEVDAVLFMVSATET---------RGAGDNYIIDQLKQVNSPVYL 122
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D I P + ++ Y++ D +V P+SA G+ V+++ + ++ KLP GP YYP
Sbjct: 123 VINKIDEINPNSLLPIMDTYKRAYDWADVFPISALQGNNVDELLNTLVAKLPEGPQYYPD 182
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++HPERF VGE+IREK+ R E+P++ V V KT+ I I+VE+ Q
Sbjct: 183 DEITDHPERFIVGELIREKVLELTRQEIPHSVAVQVEKMKTQDNGNVHIDANIIVERKGQ 242
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ ILIGK G LK + T AR +IED L KVYLE+ VKV+ +WR+ E L+ GY
Sbjct: 243 RGILIGKNGGMLKKIGTLARKEIEDLLGSKVYLELWVKVQPSWREKESALRQLGY 297
>gi|169829166|ref|YP_001699324.1| GTP-binding protein Era [Lysinibacillus sphaericus C3-41]
gi|254783660|sp|B1HTJ0.1|ERA_LYSSC RecName: Full=GTPase Era
gi|168993654|gb|ACA41194.1| GTP-binding protein era-like protein (Bex protein) [Lysinibacillus
sphaericus C3-41]
Length = 305
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 182/290 (62%), Gaps = 5/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI DTPGI + K
Sbjct: 14 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTTDSQMIFIDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D I+ +V+A + + DE + E + + P+ LV+NK D
Sbjct: 73 HKLGDFMLKVAKNTLREVDVIMFMVNAEQKLGKGDEFILEMLAG--NSTPVFLVINKIDQ 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ +E Y++ + E+IP+SA G+ VE + D + LP GP YYP D V++HP
Sbjct: 131 IHPDELLGIIESYKERYEFAEIIPISALQGNNVESLLDTLPKYLPEGPQYYPADQVTDHP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF + E+IREK+ R E+P++ V + + D I V I+VE++SQK I+I
Sbjct: 191 ERFIIYELIREKVLHLTREEIPHSIAVVIDKIRRDEENNDKIHVAATIMVERDSQKGIVI 250
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + T AR DIE L KVYLE+ VKV+++WR L+ +G+
Sbjct: 251 GKRGALLKEVGTRARKDIEMLLGSKVYLELWVKVQKDWRNKSTHLRDFGF 300
>gi|296504794|ref|YP_003666494.1| GTP-binding protein Era [Bacillus thuringiensis BMB171]
gi|296325846|gb|ADH08774.1| GTP-binding protein Era [Bacillus thuringiensis BMB171]
Length = 301
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 182/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP YYP++ V++HP
Sbjct: 129 LHPEQLLELIDQYRKLHEFAEIVPISALDGNNVDALIGTIKNYLPEGPQYYPENQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|423558116|ref|ZP_17534418.1| GTPase Era [Bacillus cereus MC67]
gi|401191384|gb|EJQ98406.1| GTPase Era [Bacillus cereus MC67]
Length = 301
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNATEGYGRGEEFIIEKLQETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++ Y K + E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 VHPEQLLALIDQYRKLYEFAEIVPISALDGNNVEALIGAIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|338211233|ref|YP_004655286.1| GTP-binding protein Era [Runella slithyformis DSM 19594]
gi|336305052|gb|AEI48154.1| GTP-binding protein Era-like-protein [Runella slithyformis DSM
19594]
Length = 327
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 196/304 (64%), Gaps = 18/304 (5%)
Query: 109 SHPNHK----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP----EYQ 160
++P+H+ S++GKPNVGKSTL N ++G+K+SI+T+K QTTRHRI+GI +G ++Q
Sbjct: 30 NNPDHRAGFVSIVGKPNVGKSTLMNVLVGEKMSIITSKAQTTRHRIMGILNGVHEGVDFQ 89
Query: 161 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 220
++ DTPGII+ + + +SMM + V+ + +AD ++ + D + + +E+LE K
Sbjct: 90 LVYSDTPGIIKPQYKLHESMM-EFVQGSLEDADVVLFVTDIFEKHDD-EEVLERLA---K 144
Query: 221 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
+ ++L++NK DL +I +K+ ++++ +IP+SA G+ + I+ LP+
Sbjct: 145 TEGAVILIINKTDLATEEQINEKIAFWKEKLFTAAIIPISALKQEGINTLFTAIMECLPV 204
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQV 338
P Y+PKD +++ PERFF EIIREK+F+ Y+ E+PY+ ++ V +K + KD I+
Sbjct: 205 HPPYFPKDELTDKPERFFAAEIIREKVFLNYKKEIPYSTEIIVEEFKDK---KDILVIRA 261
Query: 339 EIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLK 398
I+VE+ SQK I+IG G LK + +AAR D+E F KKV+LE VKV+ +WR LK
Sbjct: 262 VILVERQSQKGIIIGDKGTMLKKIGSAARADLEQFFGKKVFLEQYVKVEPDWRNKVQKLK 321
Query: 399 HYGY 402
+GY
Sbjct: 322 QFGY 325
>gi|118444749|ref|YP_878552.1| GTP-binding protein Era [Clostridium novyi NT]
gi|189037263|sp|A0Q1Q0.1|ERA_CLONN RecName: Full=GTPase Era
gi|118135205|gb|ABK62249.1| GTP-binding protein Era [Clostridium novyi NT]
Length = 294
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+KLSIV+ +PQTTR+ I + + +YQ++ DTPGI K
Sbjct: 8 SIIGRPNVGKSTLTNEILGEKLSIVSCRPQTTRNNIRAVLTRDDYQLVFLDTPGI-HKPR 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D IV + + DE++ EG+ + K P+ LV+NK D
Sbjct: 67 HKLGEYMVKAAETSTDEVDLIVFITTPEGEISKGDELILEGLKNSKK--PVFLVINKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+AK L+ Y ++ D E+IP+SA+ V+ + + ++ +P GP YYP+D++++
Sbjct: 125 NPQELVAKTLKQYSEYMDFAEIIPISARKSKNVDTLLELMIKYMPEGPKYYPEDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EIIREK EVP+ V ++S K I ++ EK+S K I+IGK
Sbjct: 185 ERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQSKRGTYHIDANLLCEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ LK ++T AR DIE FL KV L++ VKVK+ WR +LK GY
Sbjct: 245 GGQKLKTISTYARQDIEKFLDAKVNLKVWVKVKKEWRDSNFMLKELGY 292
>gi|403070154|ref|ZP_10911486.1| GTP-binding protein [Oceanobacillus sp. Ndiop]
Length = 302
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 182/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++K QTTR++I G+ + + QM+ DTPGI + K
Sbjct: 13 TIIGRPNVGKSTFMNRVIGQKIAIMSDKAQTTRNKIQGVLTTDDAQMVFIDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D ++ +++A + + D+ + + + + K P+ L++NK DL
Sbjct: 72 HRLGDFMVKVAENTLNEVDAVLFMINAKEGYGKGDQYILDLLKNVKG--PVYLIINKIDL 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ +E Y+ + +E+IP+SA G+ V+ + D + LP GP YYP D V++HP
Sbjct: 130 IHPEEVFSLIEQYKDKGNFEEIIPISALEGNNVDHLVDVLKGHLPEGPQYYPADQVTDHP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ + E+P++ V + + + R K IQ IV E+++QK ILIGK
Sbjct: 190 ERFVISELIREKVLHLTKEEIPHSIAVVIENIEKREQEKLLIQAIIVTERSTQKGILIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KVYLE+ +KVK++WR E L YG+
Sbjct: 250 QGSMLKNIGRNARKDIEALLGSKVYLELWIKVKKDWRNKESQLYEYGF 297
>gi|393780154|ref|ZP_10368376.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|392608908|gb|EIW91738.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 412 str.
F0487]
Length = 293
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 186/288 (64%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQIVFSDTPGII-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + E DE + + ++ ++P+LL++NK D
Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEK-ELKDEAFFKRI--NQLEVPVLLLINKVDT 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +++ ++++ E+ P+SA E + + I+ LP PA++PKD +++ P
Sbjct: 124 SDQNVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFPKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ SQK I+IG
Sbjct: 184 ERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERESQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ALK + AR D+E F K+++LE+ VKV ++WR + L+ +GY
Sbjct: 243 KGEALKRVGVEARADLEKFFGKQIHLELFVKVNKDWRNNVRQLRRFGY 290
>gi|374324897|ref|YP_005078026.1| GTPase Era [Paenibacillus terrae HPL-003]
gi|357203906|gb|AET61803.1| GTPase Era [Paenibacillus terrae HPL-003]
Length = 300
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI +++
Sbjct: 12 AIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVFTTEDTQIVFLDTPGIHKRQS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M + G + ++ L+DA + D + E + + K P++LVLNK D
Sbjct: 72 KLGDYMNQTAFNTLG-EVEAVLFLIDAAEGLGGGDRFIAEQL--KQVKTPVILVLNKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+P + +E Y K D E++P+SAK G+ V + + + LP GP YYP D +++HP
Sbjct: 129 IEPEALLPLIEQYRKLYDFAEIVPISAKMGNNVNRLLEQVQKYLPEGPQYYPDDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F + E++REKI R EVP++ V + K + I I VE++SQK I+IGK
Sbjct: 189 EQFVIAELVREKILHMTREEVPHSIAVMIEDMKVQDNGVVHIMAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR+DI++ L K++LE+ VKVK++WR + +L+ G+
Sbjct: 249 QGAMLKEVGKQARIDIQNLLGSKIFLELWVKVKKDWRNQDRVLRDLGF 296
>gi|406894259|gb|EKD39118.1| hypothetical protein ACD_75C00507G0013 [uncultured bacterium]
Length = 358
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 177/291 (60%), Gaps = 3/291 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PN GKSTL NQ +GQK+SIVT KPQTTR+RI GI + PEYQ++ DTPG+ +
Sbjct: 68 AIVGPPNAGKSTLMNQFLGQKISIVTPKPQTTRNRIAGIVNDPEYQIVFLDTPGLHTSRE 127
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ M+ + S + ++ + PE++ E + + ++ P ++VLNK
Sbjct: 128 SLNTEMVKIAMESLADVDVVLFLVDVSLPLPEKMKEEKRAELMAYFQQINSPAIMVLNKI 187
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D I + + Y VIPVSA G GVE +++ ILT LP+GP +P+DI ++
Sbjct: 188 DQIDRKLMLPMIASYAGLYPFKAVIPVSALSGDGVESLKNEILTWLPIGPRLFPEDIPTD 247
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIIL 351
ERF GEIIREK+F+ E+PY+ V + S+K + K + IVVE+NSQK I+
Sbjct: 248 ATERFLCGEIIREKVFLLTGQEIPYSTAVLIESFKEDESKKLVTLHAAIVVERNSQKGIV 307
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGKGG+ LK + TAAR DIE L +KV L++ VKV +NW QD+ LK G+
Sbjct: 308 IGKGGEKLKSIGTAARKDIEHLLGEKVLLKLWVKVHKNWSQDKRFLKELGF 358
>gi|30022378|ref|NP_834009.1| GTP-binding protein Era [Bacillus cereus ATCC 14579]
gi|218232187|ref|YP_002369107.1| GTP-binding protein Era [Bacillus cereus B4264]
gi|384188373|ref|YP_005574269.1| GTP-binding protein Era [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676688|ref|YP_006929059.1| GTPase Era [Bacillus thuringiensis Bt407]
gi|423385801|ref|ZP_17363057.1| GTPase Era [Bacillus cereus BAG1X1-2]
gi|423527842|ref|ZP_17504287.1| GTPase Era [Bacillus cereus HuB1-1]
gi|423585220|ref|ZP_17561307.1| GTPase Era [Bacillus cereus VD045]
gi|423631022|ref|ZP_17606769.1| GTPase Era [Bacillus cereus VD154]
gi|423640619|ref|ZP_17616237.1| GTPase Era [Bacillus cereus VD166]
gi|423650165|ref|ZP_17625735.1| GTPase Era [Bacillus cereus VD169]
gi|423657256|ref|ZP_17632555.1| GTPase Era [Bacillus cereus VD200]
gi|452200765|ref|YP_007480846.1| GTP-binding protein Era [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|29897936|gb|AAP11210.1| GTP-binding protein [Bacillus cereus ATCC 14579]
gi|218160144|gb|ACK60136.1| GTP-binding protein Era [Bacillus cereus B4264]
gi|326942082|gb|AEA17978.1| GTP-binding protein Era [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401233863|gb|EJR40349.1| GTPase Era [Bacillus cereus VD045]
gi|401264389|gb|EJR70501.1| GTPase Era [Bacillus cereus VD154]
gi|401279680|gb|EJR85602.1| GTPase Era [Bacillus cereus VD166]
gi|401282583|gb|EJR88482.1| GTPase Era [Bacillus cereus VD169]
gi|401289999|gb|EJR95703.1| GTPase Era [Bacillus cereus VD200]
gi|401635857|gb|EJS53612.1| GTPase Era [Bacillus cereus BAG1X1-2]
gi|402451505|gb|EJV83324.1| GTPase Era [Bacillus cereus HuB1-1]
gi|409175817|gb|AFV20122.1| GTPase Era [Bacillus thuringiensis Bt407]
gi|452106158|gb|AGG03098.1| GTP-binding protein Era [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 301
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 182/288 (63%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP YYP++ V++HP
Sbjct: 129 LHPEQLLELIDQYRKLHEFAEIVPISALDGNNVDALIGTIKKYLPEGPQYYPENQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|420150287|ref|ZP_14657447.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394752346|gb|EJF36048.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 293
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 183/290 (63%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q+I DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVIFSDTPGII-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ L + MM V+SA +AD ++ +V+ + E+ +E ++L P+LL++NK
Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFKRINQLDVPVLLLINKV 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + +++ ++++ E+ P+SA E + + I+ LP PA++PKD ++
Sbjct: 122 DTSDQSVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFPKDQLTN 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ SQK I+I
Sbjct: 182 KPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+ALK + AR D+E F K+++LE+ VKV ++WR + L+ +GY
Sbjct: 241 GHKGEALKRVGIEARTDLEKFFGKQIHLELFVKVNKDWRNNVRQLRRFGY 290
>gi|163942056|ref|YP_001646940.1| GTP-binding protein Era [Bacillus weihenstephanensis KBAB4]
gi|423368351|ref|ZP_17345783.1| GTPase Era [Bacillus cereus VD142]
gi|423489484|ref|ZP_17466166.1| GTPase Era [Bacillus cereus BtB2-4]
gi|423495207|ref|ZP_17471851.1| GTPase Era [Bacillus cereus CER057]
gi|423497999|ref|ZP_17474616.1| GTPase Era [Bacillus cereus CER074]
gi|423512414|ref|ZP_17488945.1| GTPase Era [Bacillus cereus HuA2-1]
gi|423519000|ref|ZP_17495481.1| GTPase Era [Bacillus cereus HuA2-4]
gi|423521841|ref|ZP_17498314.1| GTPase Era [Bacillus cereus HuA4-10]
gi|423591704|ref|ZP_17567735.1| GTPase Era [Bacillus cereus VD048]
gi|423598383|ref|ZP_17574383.1| GTPase Era [Bacillus cereus VD078]
gi|423660855|ref|ZP_17636024.1| GTPase Era [Bacillus cereus VDM022]
gi|423669884|ref|ZP_17644913.1| GTPase Era [Bacillus cereus VDM034]
gi|423673910|ref|ZP_17648849.1| GTPase Era [Bacillus cereus VDM062]
gi|163864253|gb|ABY45312.1| GTP-binding protein Era [Bacillus weihenstephanensis KBAB4]
gi|401080950|gb|EJP89231.1| GTPase Era [Bacillus cereus VD142]
gi|401151300|gb|EJQ58752.1| GTPase Era [Bacillus cereus CER057]
gi|401160055|gb|EJQ67434.1| GTPase Era [Bacillus cereus HuA2-4]
gi|401161286|gb|EJQ68653.1| GTPase Era [Bacillus cereus CER074]
gi|401176503|gb|EJQ83698.1| GTPase Era [Bacillus cereus HuA4-10]
gi|401231837|gb|EJR38339.1| GTPase Era [Bacillus cereus VD048]
gi|401236653|gb|EJR43110.1| GTPase Era [Bacillus cereus VD078]
gi|401299011|gb|EJS04611.1| GTPase Era [Bacillus cereus VDM034]
gi|401300896|gb|EJS06485.1| GTPase Era [Bacillus cereus VDM022]
gi|401310276|gb|EJS15601.1| GTPase Era [Bacillus cereus VDM062]
gi|402431720|gb|EJV63784.1| GTPase Era [Bacillus cereus BtB2-4]
gi|402449385|gb|EJV81222.1| GTPase Era [Bacillus cereus HuA2-1]
Length = 301
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNATEGYGRGEEFIIEKLQETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ VE + I LP GP YYP + V++HP
Sbjct: 129 LHPEQLLELIDQYRKLYEFAEIVPISALDGNNVEALIGAIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|21673128|ref|NP_661193.1| GTP-binding protein Era [Chlorobium tepidum TLS]
gi|21646203|gb|AAM71535.1| GTP-binding protein, Era/ThdF family [Chlorobium tepidum TLS]
Length = 305
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 185/301 (61%), Gaps = 16/301 (5%)
Query: 113 HKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEK 172
H + +G PN GKSTL N+++ KLSIVT KPQTTR +I GI Q+I+ DTPGI++
Sbjct: 10 HVTFVGAPNAGKSTLLNRLLDHKLSIVTPKPQTTRKKITGIYHDDRSQIIILDTPGIMDP 69
Query: 173 KIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-----EILEEGVGDHKDKLPILL 227
K + +SM+ RS +D IV L+ K E ID E++E+ V P ++
Sbjct: 70 KQSLHESMLEITRRSLR-ESDVIVALIPFQKGDEPIDRKFASELIEQWVKPTGK--PFVI 126
Query: 228 VLNKKDLIKPGEIAK--KLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LNK DL+ P E AK + E K+ V + +SA G + ++ + + LP +
Sbjct: 127 ALNKADLV-PEETAKEAQTEIISKYKPV-ATLALSALTGGNIPELVELLRPLLPFDEPIW 184
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIV 341
P DI+S PERFFVGEIIREKIF+QY E+PY+ +V + +K + P+ K+ I+ ++
Sbjct: 185 PDDILSTEPERFFVGEIIREKIFLQYGREIPYSTEVVIDEFKEQHENNPSRKELIRCSVI 244
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
VE+NSQK I++G+ G A+K L AAR +IE+ L + VYLEI VKV+ +WR+ + LLK YG
Sbjct: 245 VERNSQKQIIVGQKGAAIKKLGQAARKEIEELLDRPVYLEIFVKVRPDWRKKKNLLKSYG 304
Query: 402 Y 402
Y
Sbjct: 305 Y 305
>gi|150015731|ref|YP_001307985.1| GTP-binding protein Era [Clostridium beijerinckii NCIMB 8052]
gi|189037260|sp|A6LRP9.1|ERA_CLOB8 RecName: Full=GTPase Era
gi|149902196|gb|ABR33029.1| GTP-binding protein Era [Clostridium beijerinckii NCIMB 8052]
Length = 298
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVLNK D
Sbjct: 67 HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDKK--CPVFLVLNKVDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+AK LE Y K E++P+SA G V+ + + + +P GP YYP D++++
Sbjct: 125 STQDRVAKSLEMYSKEFKFAEIVPISAIKGKNVDVLVELMKKAMPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K I+IGK
Sbjct: 185 EKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEIGTYHIEVDLICEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + +R ++E FL+ KV L+I VKV++ WR ++ LLK GY
Sbjct: 245 NGQTLKRIGENSRYELERFLRSKVNLKIWVKVRKEWRDNQLLLKELGY 292
>gi|425737403|ref|ZP_18855676.1| GTPase Era [Staphylococcus massiliensis S46]
gi|425482751|gb|EKU49907.1| GTPase Era [Staphylococcus massiliensis S46]
Length = 298
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 9 SIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTEADSQIIFLDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+ + R D+ + + + + K P+ LVLNK DL
Sbjct: 68 HKLGDYMMKVAKNTLGEIDAIMFMVNVDEEIGRGDQYIMDMLKNVK--TPVFLVLNKIDL 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++E Y+++ D EVIP+SA G V+ + + LP GP YYP D +S+HP
Sbjct: 126 VHPDQLMPRIEQYQEYMDFTEVIPISALEGLNVDHFISVLKSYLPEGPKYYPDDQISDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V E+IREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 186 EQFVVSELIREKILELTSEEIPHAIGVNVDRMVKESEDRVRIEATIFVERDSQKGIVIGK 245
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYL++ VKV+ +WR ++ GY
Sbjct: 246 GGKKLKEVGKRARRDIEILLGSKVYLDVWVKVQRDWRNKVNFIRQMGY 293
>gi|402300044|ref|ZP_10819597.1| Era/ThdF family GTP-binding protein [Bacillus alcalophilus ATCC
27647]
gi|401724835|gb|EJS98164.1| Era/ThdF family GTP-binding protein [Bacillus alcalophilus ATCC
27647]
Length = 304
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL NQ+IGQK++I+++KPQTTR+++ G+ + E Q++ DTPGI + K
Sbjct: 14 SIIGRPNVGKSTLINQVIGQKIAIMSDKPQTTRNKVQGVYTTNEAQIVFIDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +VDA ++ +E + E + + + K LV+NK D
Sbjct: 73 HKLGDFMMKVAQNTLREVDLVLYVVDATESFGPGEEFIIERLKETEAK--TFLVINKIDQ 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y D DEV+P+SA G+ V + + I+ L GP YYP D V++HP
Sbjct: 131 VHPEKLLGVIETYRTKYDFDEVVPISALQGNNVTTLLEQIVGYLDEGPQYYPSDQVTDHP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF + E++REK+ R EVP++ V + K R ++ ++ ++VE++SQK I+IG
Sbjct: 191 ERFIIAELVREKVLHMTREEVPHSIAVVIEQIKRREGSETVYVGATVIVERDSQKGIVIG 250
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K GK L+ + AR DIE L KV+LE+ VKV+++WR L+ YG+
Sbjct: 251 KQGKVLREVGKQARADIEALLGSKVFLELWVKVQKDWRNKSTHLRDYGF 299
>gi|365904106|ref|ZP_09441865.1| GTPase Era [Lactobacillus versmoldensis KCTC 3814]
Length = 302
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 181/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++I ++++I + K QTTR++I GI + E Q+I DTPGI K
Sbjct: 11 AIVGRPNVGKSTFMNRIIKEQVAITSPKAQTTRNKIQGIYTDNERQIIFLDTPGI-HKTH 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ LD M K SA D ++ + +A + D+ + E + + K P+ L+LNK DL
Sbjct: 70 NDLDQYMDKAALSALKEVDVVLFMTEAGQQAGPGDKYIIEELANVK--APVFLILNKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+A +++ Y+ D EVIP+SA G+ VED+ D + LP GP YY +D +++HP
Sbjct: 128 INPDEMAPQIDEYKDLLDFAEVIPISATNGNNVEDLIDSLTKHLPFGPKYYDEDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
E F VGE+IREKI R+E+P++ V V S R T + +QVE I VE++ QK I+I
Sbjct: 188 EYFIVGELIREKILDDTRDEIPHSVAVIVESMNQR-TERGKLQVEATIYVERDGQKAIVI 246
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG LK + +R+ IE L +K+ L++ VKVK+NWR D L GY
Sbjct: 247 GKGGSMLKNIGIGSRIKIEHLLGEKINLKLWVKVKKNWRDDPLFLSKAGY 296
>gi|420161056|ref|ZP_14667827.1| GTP-binding protein Era [Weissella koreensis KCTC 3621]
gi|394745806|gb|EJF34624.1| GTP-binding protein Era [Weissella koreensis KCTC 3621]
Length = 302
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQMIG+K++I++ K QTTR++I GI + + Q++ DTPGI K
Sbjct: 12 ALVGRPNVGKSTLLNQMIGEKIAIMSPKAQTTRNKIQGIYTTTQGQIVFLDTPGI-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K SA +D + LVDA R D+ + + + K P+ L++NK DL
Sbjct: 71 NSLGDYMVKTAMSAIRESDMVWFLVDAETPRGRGDDFIINRL--KETKTPVYLIINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+KP + + Y+ D E+ P+SA+ G GV+ + D+ + K+ +GP YYP D +++HP
Sbjct: 129 VKPEALLTMIADYQSQMDFAEIFPISARNGDGVQSLLDFAMPKMEVGPQYYPADQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + IQ I+VE+ +QK I+IGK
Sbjct: 189 ERFIMAELIREKVLQLTRQEVPHSVAVVIDKIERKDEKHLHIQATIIVERPTQKNIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G +K + AR DIE L KV+LE VKV+E WR L+ YGY
Sbjct: 249 QGAMIKEIGIRARRDIERLLGDKVFLETWVKVEERWRDKPQALQSYGY 296
>gi|206971303|ref|ZP_03232254.1| GTP-binding protein Era [Bacillus cereus AH1134]
gi|365158912|ref|ZP_09355100.1| GTPase Era [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411903|ref|ZP_17389023.1| GTPase Era [Bacillus cereus BAG3O-2]
gi|423426433|ref|ZP_17403464.1| GTPase Era [Bacillus cereus BAG3X2-2]
gi|423432311|ref|ZP_17409315.1| GTPase Era [Bacillus cereus BAG4O-1]
gi|423437746|ref|ZP_17414727.1| GTPase Era [Bacillus cereus BAG4X12-1]
gi|423503014|ref|ZP_17479606.1| GTPase Era [Bacillus cereus HD73]
gi|423582508|ref|ZP_17558619.1| GTPase Era [Bacillus cereus VD014]
gi|423634876|ref|ZP_17610529.1| GTPase Era [Bacillus cereus VD156]
gi|449091263|ref|YP_007423704.1| GTP-binding protein Era [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|206734075|gb|EDZ51246.1| GTP-binding protein Era [Bacillus cereus AH1134]
gi|363626076|gb|EHL77080.1| GTPase Era [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103971|gb|EJQ11948.1| GTPase Era [Bacillus cereus BAG3O-2]
gi|401111180|gb|EJQ19079.1| GTPase Era [Bacillus cereus BAG3X2-2]
gi|401117067|gb|EJQ24905.1| GTPase Era [Bacillus cereus BAG4O-1]
gi|401120901|gb|EJQ28697.1| GTPase Era [Bacillus cereus BAG4X12-1]
gi|401213387|gb|EJR20128.1| GTPase Era [Bacillus cereus VD014]
gi|401278862|gb|EJR84792.1| GTPase Era [Bacillus cereus VD156]
gi|402459235|gb|EJV90972.1| GTPase Era [Bacillus cereus HD73]
gi|449025020|gb|AGE80183.1| GTP-binding protein Era [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 301
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP YYP + V++HP
Sbjct: 129 LHPEQLLELIDQYRKLHEFAEIVPISALDGNNVDALIGTIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|339635061|ref|YP_004726702.1| GTPase Era [Weissella koreensis KACC 15510]
gi|338854857|gb|AEJ24023.1| GTPase Era [Weissella koreensis KACC 15510]
Length = 302
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQMIG+K++I++ K QTTR++I GI + + Q++ DTPGI K
Sbjct: 12 ALVGRPNVGKSTLLNQMIGEKIAIMSPKAQTTRNKIQGIYTTTQGQIVFLDTPGI-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K SA +D + LVDA R D+ + + + K P+ L++NK DL
Sbjct: 71 NSLGDYMVKTAMSAIRESDMVWFLVDAETPRGRGDDFIINRL--KETKTPVYLIINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+KP + + Y+ D E+ P+SA+ G GV+ + D+ + K+ +GP YYP D +++HP
Sbjct: 129 VKPEALLTMIADYQSQMDFAEIFPISARNGDGVQSLLDFAMPKMEVGPQYYPADQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + IQ I+VE+ +QK I+IGK
Sbjct: 189 ERFIMAELIREKVLQLTRQEVPHSVAVVIDKIERKDEKHLHIQATIIVERPTQKNIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G +K + AR DIE L KV+LE VKV+E WR L+ YGY
Sbjct: 249 QGAMIKEIGIRARRDIERLLGDKVFLETWVKVEERWRDRPQALQSYGY 296
>gi|224025981|ref|ZP_03644347.1| hypothetical protein BACCOPRO_02732 [Bacteroides coprophilus DSM
18228]
gi|224019217|gb|EEF77215.1| hypothetical protein BACCOPRO_02732 [Bacteroides coprophilus DSM
18228]
Length = 293
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 183/289 (63%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA ++AD ++ + D + P++ E +E+ + +P+LL++NK DL
Sbjct: 68 KLQESMLNFS-ESALVDADVLLYVTDTIEQPDKNQEFMEKV---RRLDVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K ++ + + E+IPVSAK V+ + I +P P Y+ KD +++ P
Sbjct: 124 SNQKDLVKLVDQWHEMLPKAEIIPVSAKARFNVDAVMKRIRELIPDSPPYFGKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
RFFV EIIREKI + Y E+PYA +V V +K AK I I VE++SQK I+IG
Sbjct: 184 ARFFVTEIIREKILLYYDKEIPYAVEVVVEQFKEE--AKSIHINAVIYVERDSQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K GKALK +AT AR +E F QK +YLE VKV ++WR + LK++GY
Sbjct: 242 KQGKALKKVATEARKTLEHFFQKTIYLETFVKVDKDWRSSDKELKNFGY 290
>gi|256819059|ref|YP_003140338.1| GTP-binding protein Era [Capnocytophaga ochracea DSM 7271]
gi|256580642|gb|ACU91777.1| GTP-binding protein Era [Capnocytophaga ochracea DSM 7271]
Length = 293
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 184/290 (63%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGII-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ L + MM V+SA +AD ++ +V+ + E+ +E + ++L P+LL++NK
Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFNRINQLDVPVLLLINKV 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + +++ ++++ E+ P+SA E + + I+ LP PA++PKD +++
Sbjct: 122 DTSDQNVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFPKDQLTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ SQK I+I
Sbjct: 182 KPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+ALK + R D+E F K+++LE+ VKV ++WR + L+ +GY
Sbjct: 241 GHKGEALKRVGIETRTDLEKFFGKQIHLELFVKVNKDWRSNVRQLRRFGY 290
>gi|116494998|ref|YP_806732.1| GTP-binding protein Era [Lactobacillus casei ATCC 334]
gi|122263585|sp|Q038T2.1|ERA_LACC3 RecName: Full=GTPase Era
gi|116105148|gb|ABJ70290.1| GTPase [Lactobacillus casei ATCC 334]
Length = 300
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 186/300 (62%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDK 222
+ K + LD+ M K S D I+ +V+A DE E+G GD + K
Sbjct: 65 HKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L++NK DL+KP ++ +E Y+ +V P+SA + V+++ + LP+GP
Sbjct: 115 KPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMENNVDELLTALTDALPVGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 294
>gi|227537544|ref|ZP_03967593.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33300]
gi|227242596|gb|EEI92611.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33300]
Length = 292
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++GKPN GKSTL N ++G+K+SI+T K QTTRHRI+GI + +Q++ DTPG+I K
Sbjct: 9 SIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRIIGIVNDENHQIVFSDTPGVI-KPN 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE--ILEEGVGDHKDKLPILLVLNKK 232
+ L MM V+ + I+AD I+ + D E+ DE ++E+ K P+ +++NK
Sbjct: 68 YSLQESMMNFVQGSLIDADIILFVTDIN---EKYDENDVIEKL---RKTSSPVAVLINKI 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D ++ K+E++++ + D + +SA H V I ++I KLP YY KD +++
Sbjct: 122 DKSTEEDVKAKIEFWKEKLNPDTIFAISALLQHNVVAIMEYIKEKLPEHAPYYEKDELTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
RFFV E+IREK+F Y E+PY+ +V + SYK P I EI+VE++SQK ILI
Sbjct: 182 KSMRFFVSEMIREKVFKLYDKEIPYSTEVIITSYKEEPKITR-IAAEIIVERDSQKNILI 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G+ +K + T AR DIE+F+ KV+LEI VKV +WR + LK +GY
Sbjct: 241 GKAGEMIKKVGTYARQDIEEFIGGKVFLEIFVKVIPDWRSKKNYLKRFGY 290
>gi|424780584|ref|ZP_18207457.1| GTP-binding protein Era [Catellicoccus marimammalium M35/04/3]
gi|422842986|gb|EKU27433.1| GTP-binding protein Era [Catellicoccus marimammalium M35/04/3]
Length = 299
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 ALIGRPNVGKSTLLNRIVGQKVAIMSDKAQTTRNKIQGVYTTEDAQIIFIDTPGIHKPKS 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ SA D I LV A + R DE + E + K P+ LV+NK D
Sbjct: 70 RLGD-FMVESAYSALHEVDAICFLVSADQKMGRGDEFIIERL--RKVDTPVYLVINKIDK 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y VIP+SA G+ V+++ ++ +LP GP YYP+D V++HP
Sbjct: 127 VHPNDLLPLIEQYMAAYPFKAVIPISATQGNNVDELLKTLVEELPEGPQYYPEDQVTDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F V E+IREK+ R EVP++ V V + K +Q I+VE+ SQK I+IGK
Sbjct: 187 EYFIVSELIREKVLELTREEVPHSVAVVVDKMRGDENGKIHVQATIIVERASQKGIIIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + T AR DIE L KVYLE+ VKV++NWR + L+ YGY
Sbjct: 247 NGQMLKNIGTRARKDIERLLGNKVYLELWVKVQKNWRDKQVYLQDYGY 294
>gi|379723273|ref|YP_005315404.1| hypothetical protein PM3016_5559 [Paenibacillus mucilaginosus 3016]
gi|386725996|ref|YP_006192322.1| GTPase Era [Paenibacillus mucilaginosus K02]
gi|378571945|gb|AFC32255.1| Era [Paenibacillus mucilaginosus 3016]
gi|384093121|gb|AFH64557.1| GTPase Era [Paenibacillus mucilaginosus K02]
Length = 303
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 174/290 (60%), Gaps = 3/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + Q++ DTPGI K
Sbjct: 16 SIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTDAAQIVFLDTPGI-HKPT 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L MMK + D I+ L+D + D + E + K P++LVLNK D
Sbjct: 75 SKLGDYMMKTAQGTLGEVDAILFLIDVVEGLGGGDRFIIEQL--KKVTTPVILVLNKIDQ 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++P ++ + + Y+ E++PVSAK G+ V + + ++ LP GP YYP D +++HP
Sbjct: 133 VQPEKLLEVITTYKDLYSFAEIVPVSAKNGNNVGTLLEQVIKYLPQGPQYYPADQITDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI R E+P++ V++ K I I VE++SQK I+IGK
Sbjct: 193 EQFVCAELIREKILHMTREEIPHSIAVSIEDMKVEENGVVHISAVIFVERDSQKGIIIGK 252
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
G LK + AR DIE L K +LE+ VKVK++WR E +LK G+ G
Sbjct: 253 KGALLKEVGRQARGDIERLLGSKTFLELWVKVKKDWRNQERILKDLGFRG 302
>gi|423389383|ref|ZP_17366609.1| GTPase Era [Bacillus cereus BAG1X1-3]
gi|423400853|ref|ZP_17378026.1| GTPase Era [Bacillus cereus BAG2X1-2]
gi|423417775|ref|ZP_17394864.1| GTPase Era [Bacillus cereus BAG3X2-1]
gi|423457451|ref|ZP_17434248.1| GTPase Era [Bacillus cereus BAG5X2-1]
gi|423478442|ref|ZP_17455157.1| GTPase Era [Bacillus cereus BAG6X1-1]
gi|401106946|gb|EJQ14903.1| GTPase Era [Bacillus cereus BAG3X2-1]
gi|401147835|gb|EJQ55328.1| GTPase Era [Bacillus cereus BAG5X2-1]
gi|401641474|gb|EJS59191.1| GTPase Era [Bacillus cereus BAG1X1-3]
gi|401653843|gb|EJS71386.1| GTPase Era [Bacillus cereus BAG2X1-2]
gi|402428604|gb|EJV60701.1| GTPase Era [Bacillus cereus BAG6X1-1]
Length = 301
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP YYP + V++HP
Sbjct: 129 LHPEQLLELIDQYRKLYEFAEIVPISALDGNNVDALIGTIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|424836384|ref|ZP_18261033.1| GTPase Era [Clostridium sporogenes PA 3679]
gi|365977078|gb|EHN13181.1| GTPase Era [Clostridium sporogenes PA 3679]
Length = 296
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ+I DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ A + D ++ L++ + P + D + E + + K +P+ LVLNK D
Sbjct: 67 HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGKGDLFIIEQLKEVK--VPVFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++A+ L+ Y + D E+IP+SA G V+ +++ + +P GP YYP+D++ +
Sbjct: 125 NPQEKVAETLKTYSELMDFQEIIPISALKGKNVDLLKELMFKYIPEGPQYYPEDMIIDQN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K I+IGK
Sbjct: 185 ERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNDKGTYHIEGNILCEKNSHKPIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK ++ AR DIE FLQ KVY+ + VKVKE WR ++ LLK GY
Sbjct: 245 GGSKLKKISQYARQDIEAFLQSKVYIRLWVKVKEEWRDNQSLLKELGY 292
>gi|383753798|ref|YP_005432701.1| putative GTP-binding protein Era [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365850|dbj|BAL82678.1| putative GTP-binding protein Era [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 299
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 179/296 (60%), Gaps = 17/296 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IGQK++I+++KPQTTR+RIL I + P+ Q++ DTPGI + K
Sbjct: 11 AVIGRPNVGKSTLINTLIGQKIAIMSDKPQTTRNRILCILTQPDAQIVFLDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L M+K D I +VDA + + G G+H K P++L
Sbjct: 70 HKLGEYMVKAAEGTLREVDAIFFVVDATE---------KMGPGEHYILERLQATKRPVIL 120
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK DLI+ + + Y + V+P+SAK ++ + LP GP YYP+
Sbjct: 121 VVNKLDLIEREQALPIISNYTSKYEFAGVVPISAKEEMNLDSLLTEAKKYLPEGPQYYPE 180
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D+V++ PER V E+IREK R+E+P+A V+V TRP +I+ I VE++SQ
Sbjct: 181 DMVTDQPERLIVAELIREKALQLTRDEIPHAIAVDVDEMTTRPNDDVYIRATIYVERDSQ 240
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K I+IG G LK + AR DI++ L KV+L++ VKVK++WR +G+L+++G+G
Sbjct: 241 KGIVIGAKGAMLKEIGALARTDIQNLLGSKVFLDLWVKVKKDWRDRDGILRNFGFG 296
>gi|418411979|ref|ZP_12985245.1| GTPase Era [Staphylococcus epidermidis BVS058A4]
gi|410891562|gb|EKS39359.1| GTPase Era [Staphylococcus epidermidis BVS058A4]
Length = 299
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 SIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +V+ + R DE + E + + K PI LVLNK DL
Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLNNVK--TPIFLVLNKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP + +S+HP
Sbjct: 127 VHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDNQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V EIIREKI E+P+A VNV + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L KVYLE+ VKV+ +WR ++ Y
Sbjct: 247 GGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQILY 294
>gi|75761897|ref|ZP_00741822.1| GTP-binding protein era [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218899466|ref|YP_002447877.1| GTP-binding protein Era [Bacillus cereus G9842]
gi|402564235|ref|YP_006606959.1| GTPase Era [Bacillus thuringiensis HD-771]
gi|423358663|ref|ZP_17336166.1| GTPase Era [Bacillus cereus VD022]
gi|423561232|ref|ZP_17537508.1| GTPase Era [Bacillus cereus MSX-A1]
gi|434377467|ref|YP_006612111.1| GTPase Era [Bacillus thuringiensis HD-789]
gi|74490605|gb|EAO53896.1| GTP-binding protein era [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218541393|gb|ACK93787.1| GTP-binding protein Era [Bacillus cereus G9842]
gi|401084535|gb|EJP92781.1| GTPase Era [Bacillus cereus VD022]
gi|401201489|gb|EJR08354.1| GTPase Era [Bacillus cereus MSX-A1]
gi|401792887|gb|AFQ18926.1| GTPase Era [Bacillus thuringiensis HD-771]
gi|401876024|gb|AFQ28191.1| GTPase Era [Bacillus thuringiensis HD-789]
Length = 301
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP YYP + V++HP
Sbjct: 129 LHPEQLLELIDQYRKLHEFAEIVPISALDGNNVDALIGTIKKYLPEGPQYYPDNQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEVGKRARFDIEALLGSKVFLEVWVKVQKDWRNKLSQLRDLGF 296
>gi|399926842|ref|ZP_10784200.1| GTPase Era [Myroides injenensis M09-0166]
Length = 295
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 188/292 (64%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI + EYQ+I DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNDEEYQIIFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+SA +AD ++ +V+ + E DE + + K +P+LL++NK D
Sbjct: 68 YELQESMMDFVKSAFEDADVLIYMVEVGEK-ELKDEAFFNRITNAK--VPVLLLINKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
G++ +++E W+ K + E+ P+SA + + D I+ LP+ P +Y KD +++
Sbjct: 125 SNQGQLEEQVELWHSKVPNA-EIFPISALERFNTQAVFDRIVELLPVCPPFYSKDALTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PERFFV EIIREKI + Y E+PYA + V + +D I++ I+VE+++QK I+
Sbjct: 184 PERFFVNEIIREKILLNYDKEIPYAVE---VETEEFFEEEDIIRIRSVIMVERDTQKGII 240
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
IG G ALK + AAR ++E F KKV+LE+ VKV ++WR ++ L+ +GY
Sbjct: 241 IGHKGSALKKVGIAAREEMEKFFMKKVHLELFVKVNKDWRSNDYQLRRFGYN 292
>gi|365853627|ref|ZP_09393894.1| ribosome biogenesis GTPase Era [Lactobacillus parafarraginis F0439]
gi|363712252|gb|EHL95951.1| ribosome biogenesis GTPase Era [Lactobacillus parafarraginis F0439]
Length = 300
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 184/297 (61%), Gaps = 8/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN++S ++G+PNVGKST N+++GQK++I+++K QTTR++I G+ + + Q++ D
Sbjct: 3 NPNYRSGFVAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQIVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI K + L MM + SA D ++ +V+A + D + + + + DK PI
Sbjct: 63 TPGI-HKPQNKLGDFMMDSALSALREVDAVLFMVNATERRGAGDNFIIKQL-QNVDK-PI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
L++NK D I P ++ +E Y+ EV P+SA G+ V ++ + +LP GP YY
Sbjct: 120 YLLINKIDEISPDDVMAIIEQYKDALPFKEVFPISALQGNNVPELISSLTNELPNGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
PKD V++HPERF + E+IREK+ R E+P++ V + S K + IQ I+VE++
Sbjct: 180 PKDQVTDHPERFVISELIREKVLQMTRQEIPHSTAVYIESIKKQDELLR-IQATIIVERD 238
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGG LK + T AR DIE+ + KVYLE+ VKV+ +WR LL YGY
Sbjct: 239 GQKAIVIGKGGSMLKKIGTMARKDIENMMGNKVYLELWVKVEVHWRDKANLLNSYGY 295
>gi|430750565|ref|YP_007213473.1| GTP-binding protein Era [Thermobacillus composti KWC4]
gi|430734530|gb|AGA58475.1| GTP-binding protein Era [Thermobacillus composti KWC4]
Length = 315
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + Q++ DTPGI K
Sbjct: 27 AIVGRPNVGKSTLMNHLIGQKVAIMSDKPQTTRNKIHGVYTSDRAQIVFLDTPGI-HKPT 85
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L M ++ SA D I+ LVD + D + E + K K P+ LV+NK D
Sbjct: 86 SKLGDFMNRSADSALAEVDVILFLVDVSEELGGGDRFIIEKL--KKTKTPVFLVMNKIDK 143
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + + Y + D EV+P+SA G+ V + D I+ LP GP YYP D V++HP
Sbjct: 144 VHPDALLPAIAKYRELFDFAEVVPISALNGNNVGTLLDQIIRYLPEGPMYYPADQVTDHP 203
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI EVP++ V + + +I+ I VE++SQK I+IGK
Sbjct: 204 EQFICAELIREKILQLTYEEVPHSIAVATEEMRVQENGVVYIRAVIYVERDSQKGIIIGK 263
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G L+ + AAR DIE L ++YL++ VKVK++WR E +L+ +G+
Sbjct: 264 HGAMLREVGAAARQDIEALLGSRIYLDLWVKVKKDWRNQERVLRDFGF 311
>gi|337748357|ref|YP_004642519.1| hypothetical protein KNP414_04117 [Paenibacillus mucilaginosus
KNP414]
gi|336299546|gb|AEI42649.1| Era [Paenibacillus mucilaginosus KNP414]
Length = 303
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 174/290 (60%), Gaps = 3/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + Q++ DTPGI K
Sbjct: 16 SIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTDAAQIVFLDTPGI-HKPT 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L MMK + D I+ L+D + D + E + K P++LVLNK D
Sbjct: 75 SKLGDYMMKTAQGTLGEVDAILFLIDVVEGLGGGDRFIIEQL--KKVTTPVILVLNKIDQ 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++P ++ + + Y+ E++PVSAK G+ V + + ++ LP GP YYP D +++HP
Sbjct: 133 VQPEKLLEVITTYKDLYSFAEIVPVSAKNGNNVGTLLEQVIKYLPQGPQYYPADQITDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI R E+P++ V++ K I I VE++SQK I+IGK
Sbjct: 193 EQFVCAELIREKILHMTREEIPHSIAVSIEDMKVEENGVVHISAVIFVERDSQKGIIIGK 252
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
G LK + AR DIE L K +LE+ VKVK++WR E +LK G+ G
Sbjct: 253 KGALLKEVGRQARGDIERLLGSKTFLELWVKVKKDWRNQERVLKDLGFRG 302
>gi|390453089|ref|ZP_10238617.1| GTPase Era [Paenibacillus peoriae KCTC 3763]
Length = 300
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI +++
Sbjct: 12 AIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGIHKRQS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M + G + ++ L+DA + D + E + + K P++LVLNK D
Sbjct: 72 KLGDYMNQTAFNALG-EVEAVLFLIDAAEGLGGGDRFIVEQL--KQVKTPVILVLNKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+P + +E Y K D E++P+SAK G+ V+ + + + LP GP YYP D +++HP
Sbjct: 129 IEPEALLPLIEQYRKLYDFAEIVPISAKMGNNVDRLLEQLQKYLPEGPQYYPDDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F + E++REKI R EVP++ V + K + I I VE++SQK I+IGK
Sbjct: 189 EQFVIAELVREKILHMTREEVPHSIAVMIEDMKVQDNGVVHIMAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DI++ L K++LE+ VKVK++WR E +L+ G+
Sbjct: 249 QGAMLKEVGKQARQDIQNLLGSKIFLELWVKVKKDWRNQERVLRDLGF 296
>gi|433444369|ref|ZP_20409288.1| GTP-binding protein Era [Anoxybacillus flavithermus TNO-09.006]
gi|432001661|gb|ELK22534.1| GTP-binding protein Era [Anoxybacillus flavithermus TNO-09.006]
Length = 302
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 178/289 (61%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 12 AIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K +SA D I+ +V+A + R DE + E + + + P+ LV+NK D
Sbjct: 71 HKLGDFMVKVAQSALQEVDLILFMVNAVEGIGRGDEFIIERL--KQVQTPVFLVINKIDE 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y EVIP+SA G+ VE + I LP GP YYP V++HP
Sbjct: 129 VHPDDLLPLIEQYRSLHSFAEVIPISALQGNNVETLLQQIKNYLPEGPQYYPAHQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF + E IREK R EVP++ V + S + R + ++ I+VE++SQK I+IG
Sbjct: 189 ERFIIAEFIREKALHLTREEVPHSIAVVIDSIERRENSDTVYVAATIIVERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR DIE L KV+LE+ VKV+++WR L+ GY
Sbjct: 249 KRGQMLKEIGQRARADIEALLGSKVFLELWVKVQKDWRNKMAHLRDLGY 297
>gi|255030306|ref|ZP_05302257.1| GTP-binding protein Era [Listeria monocytogenes LO28]
Length = 285
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 176/283 (62%), Gaps = 4/283 (1%)
Query: 121 NVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSM 180
NVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K H L
Sbjct: 1 NVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK-HKLGDF 59
Query: 181 MMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEI 240
M+K + D I ++DA R DE + E + + + P+ L++NK DLI P ++
Sbjct: 60 MVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDLIAPEDL 117
Query: 241 AKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVG 300
K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD +++HPERF +
Sbjct: 118 FKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHPERFIIS 177
Query: 301 EIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIGKGGKAL 359
E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IGK G+ L
Sbjct: 178 ELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIGKQGQML 237
Query: 360 KLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K + AR +IE L KV+LEI VKV++NWR E L+ YG+
Sbjct: 238 KQIGMRARKEIERLLGSKVFLEIWVKVQKNWRDKEHYLQDYGF 280
>gi|212638693|ref|YP_002315213.1| GTPase [Anoxybacillus flavithermus WK1]
gi|212560173|gb|ACJ33228.1| GTPase [Anoxybacillus flavithermus WK1]
Length = 306
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 178/289 (61%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 16 AIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTPGIHKPK- 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K +SA D I+ +V+A + R DE + E + + + P+ LV+NK D
Sbjct: 75 HKLGDFMVKVAQSALQEVDLILFMVNAVEGFGRGDEFIIERL--KQVQTPVFLVINKIDE 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y EVIP+SA G+ VE + I LP GP YYP V++HP
Sbjct: 133 VHPDDLLPLIEQYRSLHSFAEVIPISALQGNNVETLLQQIKNYLPEGPQYYPAHQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF + E IREK R EVP++ V + S + R + ++ I+VE++SQK I+IG
Sbjct: 193 ERFIIAEFIREKALHLTREEVPHSIAVVIDSIERRENSDTVYVAATIIVERDSQKGIIIG 252
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR DIE L KV+LE+ VKV+++WR L+ GY
Sbjct: 253 KRGQMLKEIGQRARADIEALLGSKVFLELWVKVQKDWRNKMAQLRDLGY 301
>gi|354558007|ref|ZP_08977264.1| GTP-binding protein Era-like-protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353549681|gb|EHC19122.1| GTP-binding protein Era-like-protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 303
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 182/293 (62%), Gaps = 4/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H SV+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q+I DTPGI
Sbjct: 11 HSGFVSVIGRPNAGKSTLLNQLLGQKVLIMSDKPQTTRNKIQCILTEERGQVIFLDTPGI 70
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
+ K H L M+ + ++ D ++ +VDA +E + + + K P +LVL
Sbjct: 71 HKPK-HKLGEFMVDSAMNSLREVDLVLYMVDASAEFGGGEEYIINAL--KQVKTPCILVL 127
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK DL+K + K +E Y K D ++P+SAK G E++ I ++P GP YYP+D
Sbjct: 128 NKIDLLKKEHVLKLIEDYSKLADFLAIVPLSAKTGENKEELLKVIFNQIPAGPMYYPEDE 187
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++ PERF + E++REK+ R+EVP++ V V S + + T ++ I+VE++SQK
Sbjct: 188 VTDQPERFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKRTLVK-VRALIIVERDSQKG 246
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG+GGK LK + + AR DIE L KV+LE+ VKVK++WR L+ +GY
Sbjct: 247 IIIGEGGKLLKEIGSLARHDIETLLGSKVFLELFVKVKKDWRNKAENLREFGY 299
>gi|170761539|ref|YP_001788258.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree]
gi|226741201|sp|B1KZM3.1|ERA_CLOBM RecName: Full=GTPase Era
gi|169408528|gb|ACA56939.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree]
Length = 296
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVLNK D
Sbjct: 67 HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D++ +
Sbjct: 125 NPQEKVAETLKTYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDMIIDQN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K I+IGK
Sbjct: 185 ERFIVAEIVREKALRLLSEEVPHGIAVEILQMKRNEKGTYHIEGNILCEKNSHKPIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK ++ AR DIE FLQ KVY+ + VKVKE WR ++ LLK GY
Sbjct: 245 GGSKLKKISQYARQDIEAFLQSKVYIRLWVKVKEEWRDNQSLLKELGY 292
>gi|260892064|ref|YP_003238161.1| GTP-binding protein Era [Ammonifex degensii KC4]
gi|260864205|gb|ACX51311.1| GTP-binding protein Era [Ammonifex degensii KC4]
Length = 300
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PNVGKSTL N ++GQK++IV++KPQTTRHRILG+ + PE Q++ DTPGI K
Sbjct: 12 SVVGRPNVGKSTLINHLVGQKVAIVSDKPQTTRHRILGVLTLPEAQIVFVDTPGI-HKPR 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L ++ A D ++ L +A P D + E + K ++P++LVLNK DL
Sbjct: 71 HRLGEYLVTLALGALKGVDLVLFLSEATSPPGAGDYFILEQL--KKAEVPVILVLNKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I + ++ + + D ++PVSA G +E + I+ LP GP Y+P ++ + P
Sbjct: 129 ISKPRLLPLIDLWRQEHDFAAIVPVSALTGENLERLVQEIVEHLPPGPQYFPPEVTTSQP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
F V E+IREK+ EVP+ V V +R +++ I VE+ S K I+IG
Sbjct: 189 PEFVVAELIREKVLHLTHEEVPHGVAVVVEEMASRRKDLVYLRATIYVERESHKKIIIGA 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ L+ + AR +IE FL KKVYL++ VKVKE WR+D+ L+ GY
Sbjct: 249 GGQMLRQIGQKAREEIEAFLGKKVYLDLWVKVKEKWRRDDVALRQLGY 296
>gi|148380897|ref|YP_001255438.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 3502]
gi|153932263|ref|YP_001385205.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397]
gi|153936986|ref|YP_001388674.1| GTP-binding protein Era [Clostridium botulinum A str. Hall]
gi|226741172|sp|A7FXK1.1|ERA_CLOB1 RecName: Full=GTPase Era
gi|226741199|sp|A5I626.1|ERA_CLOBH RecName: Full=GTPase Era
gi|148290381|emb|CAL84508.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502]
gi|152928307|gb|ABS33807.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397]
gi|152932900|gb|ABS38399.1| GTP-binding protein Era [Clostridium botulinum A str. Hall]
Length = 296
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVLNK D
Sbjct: 67 HKLGEYMVKSASEAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D++ +
Sbjct: 125 NPQEKVAETLKTYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDMIIDQN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K I+IGK
Sbjct: 185 ERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKPIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK ++ AR DIE FLQ KVY+ + VKVKE WR ++ LLK GY
Sbjct: 245 GGSKLKKISQYARQDIEAFLQSKVYIRLWVKVKEEWRDNQSLLKELGY 292
>gi|365902690|ref|ZP_09440513.1| GTPase [Lactobacillus malefermentans KCTC 3548]
Length = 301
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 186/304 (61%), Gaps = 21/304 (6%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKST N+++GQK++I+++K QTTR++I GI + E Q++ D
Sbjct: 3 NPNYKSGFLAIIGRPNVGKSTFLNRVVGQKVAIMSDKAQTTRNKIQGIYTTDEAQIVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL 223
TPG+ + K + L M+K+ S+ D ++ +V+A DE + G GD+ D+L
Sbjct: 63 TPGVHKPK-NQLGDFMVKSALSSLNEVDAVLFMVNA-------DE--KRGAGDNFIIDRL 112
Query: 224 -----PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 278
PI LV+NK D + P ++ ++ ++ D EV P+SA G+ V ++ + ++ L
Sbjct: 113 KTVKKPIYLVINKIDQVHPDDLIVIVDQFKNALDWKEVYPISALEGNNVNELLNKLVDNL 172
Query: 279 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 338
P GP YYP D +++HPERF V E+IREK+ R E+P++ V V + K IQ
Sbjct: 173 PQGPQYYPDDQITDHPERFIVSELIREKVLQLTRQEIPHSVAVVVEKMARQDEQKIHIQA 232
Query: 339 EIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLK 398
IVV++++QK ILIGKGG LK + T AR DIE L KVYLE+ VKV WR L+
Sbjct: 233 TIVVDRSTQKGILIGKGGSMLKKIGTLARQDIEHLLADKVYLELWVKVVPGWRDKASALQ 292
Query: 399 HYGY 402
YGY
Sbjct: 293 SYGY 296
>gi|168181631|ref|ZP_02616295.1| GTP-binding protein Era [Clostridium botulinum Bf]
gi|237796398|ref|YP_002863950.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657]
gi|259645941|sp|C3L3F3.1|ERA_CLOB6 RecName: Full=GTPase Era
gi|182675144|gb|EDT87105.1| GTP-binding protein Era [Clostridium botulinum Bf]
gi|229262668|gb|ACQ53701.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657]
Length = 296
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVLNK D
Sbjct: 67 HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D++ +
Sbjct: 125 NPQEKVAETLKTYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDMIIDQN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K I+IGK
Sbjct: 185 ERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKPIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK ++ AR DIE FLQ KVY+ + VKVKE WR ++ LLK GY
Sbjct: 245 GGSKLKKISQYARQDIEAFLQSKVYIRLWVKVKEEWRDNQSLLKELGY 292
>gi|189462215|ref|ZP_03011000.1| hypothetical protein BACCOP_02898 [Bacteroides coprocola DSM 17136]
gi|189431068|gb|EDV00053.1| ribosome biogenesis GTPase Era [Bacteroides coprocola DSM 17136]
Length = 293
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 184/290 (63%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA ++AD ++ + D + P++ + +E+ + K+P+LL++NK DL
Sbjct: 68 KLQESMLNFS-ESALVDADVLLYVTDTIEKPDKNADFMEKV---RRVKVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
E+ K +E W+E + E+IP+SAK V+ + I +P P Y+ KD +++
Sbjct: 124 TNQEELVKLVEEWHEMLPEA-EIIPISAKAKFNVDVVMKRIKELIPDSPPYFGKDQLTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
P RFFV EIIREKI + Y E+PYA +V V +K AK I I VE+ SQK I+I
Sbjct: 183 PARFFVTEIIREKILLYYDKEIPYAVEVVVEQFKE--DAKSIHINAVIYVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G GKALK +AT AR +E F QK +YLE VKV ++WR + LK++GY
Sbjct: 241 GHQGKALKKVATEARKTLEHFFQKSIYLETFVKVDKDWRSSDKELKNFGY 290
>gi|37523991|ref|NP_927368.1| GTP-binding protein Era [Gloeobacter violaceus PCC 7421]
gi|35214997|dbj|BAC92363.1| glr4422 [Gloeobacter violaceus PCC 7421]
Length = 304
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 179/296 (60%), Gaps = 19/296 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+K++IV+ QTTR+R+ GI + P Q+IL DTPGI K
Sbjct: 16 AIVGRPNVGKSTLVNRLVGEKVAIVSPTAQTTRNRLRGILTLPTAQIILVDTPGI-HKPQ 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L +++ N RSA +AD IV++VD +E G GD K P+
Sbjct: 75 HRLGEVLVHNARSAAGSADGIVLVVDGS---------VEAGAGDRFIAESLKGSKAPVWP 125
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVI-PVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
VLNK D ++ E Y K D + V +SA G G+E + + I++ LP GP YYP
Sbjct: 126 VLNKVDRRSRNQVEPIRESYRKLFDPELVFYEISALKGSGIEPLMESIISSLPEGPYYYP 185
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D+ ++ PERF +GE++RE++ + R EVP++ V + + T + I+VE++S
Sbjct: 186 PDLFTDQPERFIMGELVREQVLLATREEVPHSVAVVIDKVEEGETLTRVLAT-IMVERDS 244
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QKIILIGKGG+ LK + T AR ++ + ++YL++ VKVKE WRQ + L+ GY
Sbjct: 245 QKIILIGKGGQMLKAIGTGARHQMQKLVGHQIYLQLFVKVKERWRQSDSTLRDLGY 300
>gi|170754569|ref|YP_001782578.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra]
gi|387819218|ref|YP_005679565.1| GTP-binding protein Era [Clostridium botulinum H04402 065]
gi|429246260|ref|ZP_19209597.1| GTPase Era [Clostridium botulinum CFSAN001628]
gi|226741200|sp|B1ILK9.1|ERA_CLOBK RecName: Full=GTPase Era
gi|169119781|gb|ACA43617.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra]
gi|322807262|emb|CBZ04836.1| GTP-binding protein Era [Clostridium botulinum H04402 065]
gi|428756720|gb|EKX79255.1| GTPase Era [Clostridium botulinum CFSAN001628]
Length = 296
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVLNK D
Sbjct: 67 HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D++ +
Sbjct: 125 NPQEKVAETLKTYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDMIIDQN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K I+IGK
Sbjct: 185 ERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKPIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK ++ AR DIE FLQ KVY+ + VKVKE WR ++ LLK GY
Sbjct: 245 GGSKLKKISQYARQDIEAFLQSKVYIRLWVKVKEEWRDNQSLLKELGY 292
>gi|168179376|ref|ZP_02614040.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916]
gi|182669495|gb|EDT81471.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916]
Length = 296
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVLNK D
Sbjct: 67 HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D++ +
Sbjct: 125 NPQEKVAETLKAYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDMIIDQN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K I+IGK
Sbjct: 185 ERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKPIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK ++ AR DIE FLQ KVY+ + VKVKE WR ++ LLK GY
Sbjct: 245 GGSKLKKISQYARQDIEAFLQSKVYIRLWVKVKEEWRDNQSLLKELGY 292
>gi|377556063|ref|ZP_09785786.1| GTP-binding protein Era [Lactobacillus gastricus PS3]
gi|376168801|gb|EHS87529.1| GTP-binding protein Era [Lactobacillus gastricus PS3]
Length = 303
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 174/293 (59%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + E Q+I DTPGI
Sbjct: 9 HSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTTNEAQIIFIDTPGI 68
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
+ + + D M ++ SA D I+ +V A + D + E + K + PI LV+
Sbjct: 69 HKPQTKLGD-FMERSALSALDEVDAILFVVSATEKRGPGDNFIIERL--KKVQQPIYLVI 125
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D + P ++ + + Y +VIPVSA G+ V + D ++ LP+GP YYP D
Sbjct: 126 NKIDQVHPNDLPEIVAQYNDTLPFKKVIPVSALQGNNVNGLIDELVDNLPVGPQYYPTDQ 185
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
VS+HPERF V E+IREK+F+ R EVP++ ++V S K + I+VE+ QK
Sbjct: 186 VSDHPERFVVAEMIREKVFLLTRQEVPHSVAIDVTSIKRNNEETIEVDANIIVERPGQKG 245
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + T AR DIE L KVYL + VKV WR +LK YGY
Sbjct: 246 IIIGKKGSMLKEIGTQARQDIERLLGDKVYLHLWVKVVPGWRDKNAMLKDYGY 298
>gi|187778474|ref|ZP_02994947.1| hypothetical protein CLOSPO_02068 [Clostridium sporogenes ATCC
15579]
gi|226950371|ref|YP_002805462.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto]
gi|254783292|sp|C1FVS6.1|ERA_CLOBJ RecName: Full=GTPase Era
gi|187772099|gb|EDU35901.1| ribosome biogenesis GTPase Era [Clostridium sporogenes ATCC 15579]
gi|226842790|gb|ACO85456.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto]
Length = 296
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVLNK D
Sbjct: 67 HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++A+ L+ Y + + E+IP+SA G V+ +++ + +P GP YYP+D++ +
Sbjct: 125 NPQEKVAETLKTYSELMEFQEIIPISALKGKNVDLLKELMFKYIPEGPQYYPEDMIIDQN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K I+IGK
Sbjct: 185 ERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKPIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK ++ AR DIE FLQ KVY+ + VKVKE WR ++ LLK GY
Sbjct: 245 GGSKLKKISQYARQDIEAFLQSKVYIRLWVKVKEEWRDNQSLLKELGY 292
>gi|429739609|ref|ZP_19273359.1| ribosome biogenesis GTPase Era [Prevotella saccharolytica F0055]
gi|429156490|gb|EKX99121.1| ribosome biogenesis GTPase Era [Prevotella saccharolytica F0055]
Length = 293
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 181/290 (62%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + PE+ + LE+ G K+PI+L++NK D
Sbjct: 68 KLQESMLAFS-ESALNDADILLYVTDVVENPEKNIDFLEKVKGM---KIPIILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P + +E + + E++P+SAK G + + I LP P Y+ KD +++ P
Sbjct: 124 SNPKALGDIVERWHQLLPTAEILPISAKNKFGTDVLLKRIKELLPSSPPYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
RFFV EIIREKI + Y E+PY+ +V V S+K T K+ I I VE++SQK I+IG
Sbjct: 184 ARFFVSEIIREKILLYYDKEIPYSVEVKVESFKE--TDKNIHINATIYVERDSQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KKVYLE VKV ++WR + L ++GY
Sbjct: 242 HQGVALKKVSTEARKTLEKFFDKKVYLETFVKVDKDWRSSQKELNNFGYN 291
>gi|153941135|ref|YP_001392222.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland]
gi|384463203|ref|YP_005675798.1| GTP-binding protein Era [Clostridium botulinum F str. 230613]
gi|189037261|sp|A7GHG2.1|ERA_CLOBL RecName: Full=GTPase Era
gi|152937031|gb|ABS42529.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland]
gi|295320220|gb|ADG00598.1| GTP-binding protein Era [Clostridium botulinum F str. 230613]
Length = 296
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI + K
Sbjct: 8 TIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVLNK D
Sbjct: 67 HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVLNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D++ +
Sbjct: 125 NPQEKVAETLKIYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDMIIDQN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K I+IGK
Sbjct: 185 ERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKPIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK ++ AR DIE FLQ KVY+ + VKVKE WR ++ LLK GY
Sbjct: 245 GGSKLKKISQYARQDIEAFLQSKVYIRLWVKVKEEWRDNQSLLKELGY 292
>gi|335040060|ref|ZP_08533198.1| GTP-binding protein Era-like-protein [Caldalkalibacillus thermarum
TA2.A1]
gi|334180024|gb|EGL82651.1| GTP-binding protein Era-like-protein [Caldalkalibacillus thermarum
TA2.A1]
Length = 303
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 181/299 (60%), Gaps = 24/299 (8%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IG K++I+++KPQTTR++I GI + E Q+I DTPGI + +
Sbjct: 12 ALIGRPNVGKSTLMNQIIGHKVAIMSDKPQTTRNKIQGIYTSAEGQIIFVDTPGIHKPRT 71
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVG-------DHKDKL--P 224
+ D M+ NV + D I+ LVDA +EG+G +H ++ P
Sbjct: 72 KLGDYMV--NVAQNTLREVDLILFLVDA-----------KEGLGPGDQWIINHLKEVSTP 118
Query: 225 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
+ LV+NK DL+ P E+ + Y + D EVIPVSA G+ V + + IL LP GP Y
Sbjct: 119 VFLVINKIDLVHPDELLPLITRYVELYDFKEVIPVSALQGNNVSRLMEQILRYLPEGPQY 178
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-AKDFIQVEIVVE 343
YP D V++HPERF V E+IREK+ E+P++ V++ K R FI I E
Sbjct: 179 YPSDQVTDHPERFIVAELIREKVLQLTHEEIPHSIAVDIEEMKQRDNRGTVFISAVIYTE 238
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++SQK I+IGK G+ LK + T AR +IE L K+YL++ VKVK++WR L+ +GY
Sbjct: 239 RDSQKKIVIGKQGRMLKEIGTRARQEIEALLGSKIYLDLWVKVKKDWRNKMSQLRLFGY 297
>gi|375309443|ref|ZP_09774724.1| gtp-binding protein era [Paenibacillus sp. Aloe-11]
gi|375078752|gb|EHS56979.1| gtp-binding protein era [Paenibacillus sp. Aloe-11]
Length = 300
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI +++
Sbjct: 12 AIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGIHKRQS 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M + G + ++ L+DA + D + E + + + P++LVLNK D
Sbjct: 72 KLGDYMNQTAFNALG-EVEAVLFLIDAAEGLGGGDRFIVEQL--KQVRTPVILVLNKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+P + +E Y K D E++P+SAK G+ V+ + + + LP GP YYP D +++HP
Sbjct: 129 IEPEALLPLIEQYRKLYDFAEIVPISAKMGNNVDRLLEQLQKYLPEGPQYYPDDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F + E++REKI R EVP++ V + K + I I VE++SQK I+IGK
Sbjct: 189 EQFVIAELVREKILHMTREEVPHSIAVMIEDMKVQDNGVVHIMAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DI++ L K++LE+ VKVK++WR E +L+ G+
Sbjct: 249 QGAMLKEVGKQARQDIQNLLGSKIFLELWVKVKKDWRNQERVLRDLGF 296
>gi|387929771|ref|ZP_10132448.1| GTPase Era [Bacillus methanolicus PB1]
gi|387586589|gb|EIJ78913.1| GTPase Era [Bacillus methanolicus PB1]
Length = 298
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 183/290 (63%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I++NKPQTTR++I G+ + + Q+I DTPGI + K
Sbjct: 8 SIIGRPNVGKSTFLNRVIGQKIAIMSNKPQTTRNKIQGVLTLHDSQLIFIDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K +A D ++ +V+A + + +E + E + K P+ LV+NK D
Sbjct: 67 HKLGDFMIKVAINALKEVDLVLFMVNAEEGFGKGEEFIIEKF--QQIKTPVFLVINKIDN 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ +E Y++ E+IP+SA G+ ++ + + I LP GP YYP D V++HP
Sbjct: 125 IHPDELLPIIESYKEKYTFSEIIPISALQGNNIDTLLEIIKKYLPEGPQYYPADQVTDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF V E+IREK R EVP++ V V+ R + I V ++VE++SQK I+I
Sbjct: 185 ERFIVSELIREKALHLTREEVPHSLAV-VIDKMERREGSNVIHVMASVIVERDSQKGIII 243
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK GK LK + AR+DIE+ L KV+LE+ VKV+++WR L+ YG+
Sbjct: 244 GKQGKMLKEIGQRARVDIENLLGSKVFLELWVKVQKDWRNKISQLRDYGF 293
>gi|260881589|ref|ZP_05404771.2| GTP-binding protein Era [Mitsuokella multacida DSM 20544]
gi|260848446|gb|EEX68453.1| GTP-binding protein Era [Mitsuokella multacida DSM 20544]
Length = 323
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 181/304 (59%), Gaps = 15/304 (4%)
Query: 108 ASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 163
A HKS V+G+PNVGKSTL N +IGQK++I+++KPQTT++RIL I + P+ Q++
Sbjct: 24 AKQAKHKSGFIAVIGRPNVGKSTLINTLIGQKIAIMSDKPQTTQNRILCILTEPDAQIVF 83
Query: 164 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE----ILEEGVGDH 219
DTPGI + K H L M+K D I+ +VDA E++ ILE
Sbjct: 84 LDTPGIHKPK-HKLGEYMVKAAEGTLKEVDAILFVVDAT---EKMGPGEYYILERLQATS 139
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 279
K P++LV+NK DLI+ ++ + Y V+P+SAK ++ + + LP
Sbjct: 140 K---PVILVVNKLDLIEKEQVLPIISRYADKYPFVGVVPISAKAETNLDSLLTEVKKYLP 196
Query: 280 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 339
GP YYP+D+V++ PER V E+IREK+ R+EVP+A V TRP +I+
Sbjct: 197 EGPQYYPEDMVTDQPERLIVAELIREKVLQLTRDEVPHAVAVETDEMTTRPNGDVYIRAT 256
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE++SQK I+IG G LK + AR DIE L +V+L++ VKVK++WR EG+L +
Sbjct: 257 IYVERDSQKGIIIGAKGAMLKEIGALARKDIEALLGSRVFLDLWVKVKKDWRNREGVLHN 316
Query: 400 YGYG 403
+G+G
Sbjct: 317 FGFG 320
>gi|337286350|ref|YP_004625823.1| GTP-binding protein Era [Thermodesulfatator indicus DSM 15286]
gi|335359178|gb|AEH44859.1| GTP-binding protein Era [Thermodesulfatator indicus DSM 15286]
Length = 306
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 180/297 (60%), Gaps = 12/297 (4%)
Query: 113 HKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEK 172
+ +++G PNVGKSTL NQ++G K++I T KPQTTR I G+ +G +Q+I DTPGI +
Sbjct: 16 YVALIGLPNVGKSTLLNQLLGYKVAIATPKPQTTRFPIRGVLTGENFQIIFVDTPGIHDA 75
Query: 173 KIHMLDSMMMKNVRSAGINADCIVVLVDAC----KAPERIDEILEEGVGDHKDKLPILLV 228
K + + +M++ A D IV ++D KA E+I +IL K P +L
Sbjct: 76 K-DLFNKIMVEQALKAIEEVDSIVFIIDVSNRNPKAEEKIIDIL------RKANKPAILA 128
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
LNK DL+K GE+ ++++ + ++P+SA G+E++ I+ LP GP YY D
Sbjct: 129 LNKIDLVKKGELLPIIDYFSQIYPFKAIVPISALERDGLEELVKEIVETLPEGPMYYDPD 188
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFIQVEIVVEKNSQ 347
+++ P+R EIIREK+FM R E+PYA V V ++ P IQ I VEK+SQ
Sbjct: 189 TLTDQPQRLLAAEIIREKVFMLTRQEIPYATAVVVEEFQEDPERNLIIIQATIYVEKDSQ 248
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
K I+IGKGG+ LK + T AR ++E K+V+L++ VKV + WR++E LL+ G+ G
Sbjct: 249 KGIVIGKGGQMLKKIGTLAREELEFLFGKRVHLDLWVKVLKGWRKEEKLLRRLGFPG 305
>gi|376316033|emb|CCF99436.1| GTP-binding protein Era-like-protein [uncultured Flavobacteriia
bacterium]
Length = 294
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 181/289 (62%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+KLSI+T K QTTRHRILGI +G E+Q+I DTPGI++
Sbjct: 9 NIIGNPNVGKSTLMNALVGEKLSIITAKAQTTRHRILGIVNGDEHQIIFSDTPGILQPAY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +S MM V+SA +AD ++ +V+ + + + + + K+P++L++NK D
Sbjct: 69 QLQES-MMDFVKSAFDDADILIYMVEIGEKELKNEAFFKRIIN---SKIPVILLINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
E+ +K+ +++ +SA V+ + + I+ LP GPA+YPKD +++ P
Sbjct: 125 STQEEVEEKVNYWQTKVPNSFTYVISALEKFNVDTVFNKIIELLPEGPAFYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI Y+ E+PY+ +V S+ T I+ I+VE+ +QK I+IG
Sbjct: 185 ERFFVNEKIREKILTHYKKEIPYSVEVETESFVEEETIIR-IRSVIMVERETQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G A+K + AR D+E F KK+++E+ VKV +NWR ++ LK +GY
Sbjct: 244 KGTAIKRVGAEARKDLEFFFGKKIFIELYVKVNKNWRSNDKELKRFGYN 292
>gi|205374162|ref|ZP_03226962.1| GTP-binding protein Era [Bacillus coahuilensis m4-4]
Length = 306
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 179/290 (61%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q++ DTPGI + K
Sbjct: 16 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTLADSQIVFIDTPGIHKPK- 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +VD + + DE + E + + P+ LVLNK D
Sbjct: 75 HKLGDFMMKVAQNTLKEVDIVLFMVDVAEGIGKGDEFIIEKLKNVS--TPVFLVLNKIDA 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ +E Y + E++P+SA G+ V+ + D + +P GP YYP D V++HP
Sbjct: 133 IHPDELFSIIEEYRSRFEFTEIVPISALEGNNVDTLLDQLKKYMPEGPQYYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
E F V E+IREK R E+P++ V VV +D I V I+VE++SQK I+I
Sbjct: 193 EHFIVSELIREKALHLTREEIPHSIAV-VVDKMKADNGRDTIHVMATIMVERDSQKGIVI 251
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + AR+DIE+ L KVYLE+ VKV+++WR L+ +G+
Sbjct: 252 GKKGALLKEIGQRARIDIENLLGSKVYLELWVKVQKDWRNKMSQLRDFGF 301
>gi|402574347|ref|YP_006623690.1| GTP-binding protein Era [Desulfosporosinus meridiei DSM 13257]
gi|402255544|gb|AFQ45819.1| GTP-binding protein Era [Desulfosporosinus meridiei DSM 13257]
Length = 303
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 180/293 (61%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PN GKSTL N ++GQK+ I+++KPQTTR+RI I + Q++ DTPGI + K
Sbjct: 15 SVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEERGQIVFLDTPGIHKPK- 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDHKDKLPILLVLN 230
H L M+ + + D I+ +VD E I E+L++ K P +L LN
Sbjct: 74 HKLGEFMVGAAKESMREVDAILYMVDLSAEFGPGEEFIIEMLKQ------TKTPCVLALN 127
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K DL+ ++ ++++ + D ++P+SAK G +++ I K+P GP YYP+D V
Sbjct: 128 KVDLLTKEQLMRRIQEFSGLADFKAIVPISAKTGENTDELLKVIFDKMPNGPMYYPEDEV 187
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++ PERF + E++REK+ R+EVP++ V + S + + T ++ +++VE++SQK I
Sbjct: 188 TDQPERFIMAELVREKVLQLTRDEVPHSIAVVIESVEEKKTLVK-VRAQVIVERDSQKGI 246
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+IG GGK LK + ARLDIE L V+LE+ VKVK++WR L++YGYG
Sbjct: 247 IIGAGGKQLKEIGRLARLDIEALLGSPVFLELWVKVKKDWRNRADSLRNYGYG 299
>gi|421768698|ref|ZP_16205408.1| GTP-binding protein Era [Lactobacillus rhamnosus LRHMDP2]
gi|421771151|ref|ZP_16207812.1| GTP-binding protein Era [Lactobacillus rhamnosus LRHMDP3]
gi|411185547|gb|EKS52674.1| GTP-binding protein Era [Lactobacillus rhamnosus LRHMDP2]
gi|411186586|gb|EKS53710.1| GTP-binding protein Era [Lactobacillus rhamnosus LRHMDP3]
Length = 300
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 17/300 (5%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+ NVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI
Sbjct: 5 HSGFVAIIGRANVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGI 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 222
+ K + LD M K S D I+ +V A DE ++G GD + K
Sbjct: 65 HKPK-NELDDYMDKAALSTLNQVDAILFMVAA-------DE--QKGAGDAYILRQLTEVK 114
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P+ L+LNK DL+KP ++ +E Y+ +V P+SA G+ V+++ + + LP GP
Sbjct: 115 KPVYLILNKIDLVKPDDLLPLIESYQHDYHFAQVFPISATMGNNVDELLNSLTATLPEGP 174
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+V
Sbjct: 175 QYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIV 234
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG+GG+ LK + AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 235 ERDSQKGIIIGRGGQMLKQIGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNTYLKSLGY 294
>gi|148265178|ref|YP_001231884.1| GTP-binding protein Era [Geobacter uraniireducens Rf4]
gi|259645947|sp|A5G693.1|ERA_GEOUR RecName: Full=GTPase Era
gi|146398678|gb|ABQ27311.1| GTP-binding protein Era [Geobacter uraniireducens Rf4]
Length = 297
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G K+ I ++KPQTTR+RI GI + P QM+ DTPGI K
Sbjct: 12 SIIGRPNVGKSTLLNRILGDKIVITSDKPQTTRNRIQGIHNLPGCQMVFIDTPGIHRAK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L+ M+ S+ D I+ LV+A P + ++ E + + P+LLV+NK DL
Sbjct: 71 SKLNKYMVDVALSSIKEVDVILFLVEADAKPANQEGMILELLANADA--PVLLVINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + +++ Y E++PVSA G GVE + + + +P GP Y+P DI+++ P
Sbjct: 129 VAKEALLERIAAYAALYPFREIVPVSALSGDGVERLVEVVHGFIPAGPPYFPDDILTDLP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V E+IREKIF +EVPY+ V V S+K R I I VE+ SQK I+IGK
Sbjct: 189 ERFIVAEMIREKIFRLTHDEVPYSVAVVVESFKERADGLVSIAAAINVERESQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + AR +IE+ L KV+LE+ V+V + W ++ +LK +GY
Sbjct: 249 KGEMLKRIGMQARREIEELLDTKVFLELFVRVSKEWSENTRMLKEFGY 296
>gi|134300318|ref|YP_001113814.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1]
gi|134053018|gb|ABO50989.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1]
Length = 302
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++KPQTTRH+I + + + QM+ DTPGI K
Sbjct: 14 ALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLTRNDAQMVFLDTPGI-HKPR 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ A D + LV+A +AP D+ + E + K P+ L+LNK DL
Sbjct: 73 HKLGEYMVDVALGALKEVDVALFLVEASEAPGPGDQYIAEQLKGIKT--PVFLMLNKVDL 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+ + +++ Y+ EVIPVSA G VE + D I+ LP GP YYP D+V++ P
Sbjct: 131 IQREAVLERILQYKDLLPFAEVIPVSALAGENVERLIDTIIKYLPEGPQYYPADMVTDRP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + EIIREK+ E+P++ V V K R + I E++SQK ILIGK
Sbjct: 191 ERFIMAEIIREKVLHLTSEEIPHSVAVVVEQIKERNNGVVAVSAVIYTERDSQKAILIGK 250
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + +R +IE+ L KV+LE+ VKVK++WR ++++G+
Sbjct: 251 GGNMLKEVGRRSREEIENLLGSKVFLELWVKVKKDWRNKMTDIRNFGF 298
>gi|452975095|gb|EME74914.1| GTPase Era [Bacillus sonorensis L12]
Length = 301
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTDTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDIILFMINAAEGYGKGDEFIIERLKGLTT--PVFLIVNKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ ++ Y E+IP+SA G+ ++ + + I LP GP +YP D V++HP
Sbjct: 129 IHPDELLLLIDEYRARYPFKEIIPISALEGNNIDTLLNQIEHYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V++ S K R ++ IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVSIDSIKERENGSVYVSATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L VYLE+ VKV+++WR L+ +G+
Sbjct: 249 RGSLLKEIGKRARADIEALLGSSVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|15613930|ref|NP_242233.1| Era/ThdF family GTP-binding protein [Bacillus halodurans C-125]
gi|13959358|sp|Q9KD52.1|ERA_BACHD RecName: Full=GTPase Era
gi|10173983|dbj|BAB05086.1| GTP-binding protein (Era/ThdF family) [Bacillus halodurans C-125]
Length = 304
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 179/293 (61%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI + K
Sbjct: 14 SIIGRPNVGKSTLLNHVIGQKIAIMSDKPQTTRNKIQGVYTSEDSQIVFIDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKA----PERIDEILEEGVGDHKDKLPILLVLN 230
H L MMK ++ D I+ +VD +A E I E L+E K P++LV+N
Sbjct: 73 HKLGDFMMKVAQNTLKEVDLILYVVDGAEAFGPGEEFIIERLKEA------KTPVILVIN 126
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D + P ++ +E Y + +EV+PVSA G+ V + I L GP YYP D V
Sbjct: 127 KIDKVHPDDLLSLIETYRHKHEFEEVVPVSALQGNNVPTLLLEITKHLSEGPQYYPSDQV 186
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKI 349
++HPERF + E+IREK+ R E+P++ V + K R +I IVVE++SQK
Sbjct: 187 TDHPERFVIAELIREKVLHLTREEIPHSIAVVIEQIKRRQHQDTVYIGATIVVERSSQKG 246
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK GK LK + AR DIE L KV+LE+ VKV+++WR L+ YG+
Sbjct: 247 IIIGKQGKMLKEVGQQARADIEALLGSKVFLELWVKVQKDWRNKPQHLRDYGF 299
>gi|375090585|ref|ZP_09736899.1| GTP-binding protein Era [Facklamia languida CCUG 37842]
gi|374565346|gb|EHR36617.1| GTP-binding protein Era [Facklamia languida CCUG 37842]
Length = 301
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I+++K QTTR++I G+ + P+ Q++ DTPG+ + K
Sbjct: 12 TLIGRPNVGKSTLMNQIIGQKIAIMSDKAQTTRNKIQGVYTRPDAQIVFMDTPGVHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K SA D ++VLV+A + D + + V D K +P+ LV+NK DL
Sbjct: 71 HALGDFMVKTAYSAIQGVDAVLVLVNAAEKMGPGDRFVLDRVRDLK--IPVCLVVNKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I ++ ++ Y + DEV P+SA G V+ + + ++ +P GP YYP D V +HP
Sbjct: 129 IDKTQLMPIIDQYTQEYPFDEVFPISALTGESVDRLLERLVELMPQGPQYYPADQVVDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F V E+IRE++ + R EVP++ V+V S + + + I+VE+ SQK ILIG
Sbjct: 189 EYFLVSELIREQVLFRTREEVPHSVAVSVQSMQKNEEDEVEVLATIIVERKSQKGILIGA 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK +K + A+ +IE L KVYL++ VKV++NWR + L +GY
Sbjct: 249 QGKMIKEIKRGAKREIEALLGSKVYLDLWVKVQKNWRDRQSQLNDFGY 296
>gi|297617800|ref|YP_003702959.1| GTP-binding protein Era [Syntrophothermus lipocalidus DSM 12680]
gi|297145637|gb|ADI02394.1| GTP-binding protein Era [Syntrophothermus lipocalidus DSM 12680]
Length = 294
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 170/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N +IGQK++IV+ KPQTTR+RI GI + + Q+I DTPGI +
Sbjct: 9 SIVGRPNVGKSTFLNTVIGQKVAIVSEKPQTTRNRIQGIYTCEQGQIIFIDTPGI-HRPR 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M++ + AD ++ +V A E+ DE + E + K P+ LV+NK DL
Sbjct: 68 HKLGEYMVRTAHATAREADVVLYMVSAKDGMEKGDEEIIEFL--TKTSAPVFLVVNKIDL 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ E+++ + + E P+SA G V + IL LP+GP YYP D V++ P
Sbjct: 126 VDQDEVSRCIGSFHSRFRFAETWPISAIMGTNVHALIRKILDYLPVGPYYYPPDQVTDQP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V E+IREK R EVP++ V V K R +++ + E++SQK I+IGK
Sbjct: 186 ERFIVAELIREKALYFTREEVPHSLAVEVEEMKERKGNTVYVRAVVFTERDSQKAIVIGK 245
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AARLDIE L VYL++ VKV++ WR + L+ +GY
Sbjct: 246 SGSMLKKIGEAARLDIESLLGVNVYLDLWVKVRKGWRNADAYLRGFGY 293
>gi|126663305|ref|ZP_01734303.1| putative GTP-binding protein [Flavobacteria bacterium BAL38]
gi|126624963|gb|EAZ95653.1| putative GTP-binding protein [Flavobacteria bacterium BAL38]
Length = 294
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 181/290 (62%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGDDFQVLFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD +V +V+ + + + + + K+P+LL+LNK D
Sbjct: 68 YELQNSMMDFVKSAFEDADILVYMVEIGEKELKDEAFFNKII---HSKIPVLLLLNKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ ++++ W EK + E+ P+SA V+ + D I+ LP+ PA+YPKD +++
Sbjct: 125 SNQEQLEEQVQAWKEKVPNA-ELFPISALENFNVQTVFDRIIELLPVSPAFYPKDALTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV E IREKI + Y E+PYA ++ + I+ I+VE+++QK I+IG
Sbjct: 184 PERFFVNETIREKILLNYDKEIPYAVEIETEEFIEDDNIIR-IRAVIMVERDTQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR D+E F K+++L VKV ++WR LK +GY
Sbjct: 243 HKGAALKRVGIQAREDLEKFFGKQIHLATYVKVNKDWRSSAYQLKRFGYN 292
>gi|317122971|ref|YP_004102974.1| GTP-binding protein Era [Thermaerobacter marianensis DSM 12885]
gi|315592951|gb|ADU52247.1| GTP-binding protein Era [Thermaerobacter marianensis DSM 12885]
Length = 391
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 180/295 (61%), Gaps = 16/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IG+K++I+++KPQTTR RILG+ + P Q+I DTPGI K
Sbjct: 104 ALIGRPNVGKSTLLNQLIGRKIAIMSDKPQTTRTRILGVLNRPGAQLIFVDTPGI-HKPQ 162
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H+L M++ R + + LV+A P+R E G GD + K P +L
Sbjct: 163 HLLGEHMVRVARRTLQEVEVVCWLVEA---PDR-----EPGPGDRYIAEQLVEVKTPKIL 214
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D + PGE+ + + + V PVSA +G GV ++ + + +LP GP ++P+
Sbjct: 215 VVNKIDQVAPGEVPAIAQRFAQLGQFAAVHPVSALHGVGVPELVEELEGRLPQGPRFFPE 274
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D++++ PE + E+IRE+I + R EVP+A V + + RP ++ I VE+ Q
Sbjct: 275 DMITDQPEAQIMAELIREQILHRTREEVPHAVAVLIEKVERRPNGVVYVPATIYVEREGQ 334
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIG+ G+ LK + ARL+IE L K+YL++ VKVK +WR +G L ++G+
Sbjct: 335 KRILIGEQGRMLKEIGRLARLEIEALLGSKIYLDLWVKVKPDWRNKQGALSNFGF 389
>gi|152976731|ref|YP_001376248.1| GTP-binding protein Era [Bacillus cytotoxicus NVH 391-98]
gi|152025483|gb|ABS23253.1| GTP-binding protein Era [Bacillus cytotoxicus NVH 391-98]
Length = 301
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q+I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKVQGVYTENDAQVIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D ++ +V+A + R +E + E + + + P+ LV+NK D
Sbjct: 71 HKLGDFMVKMAQTTLKEVDIVLFMVNAAEGFGRGEEYIIEKLKETRQ--PVFLVINKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + ++ Y + E++P+SA G+ VE + I LP GP YYP++ V++HP
Sbjct: 129 VHPEKLLELIDQYRNLYEFAEIVPISALEGNNVEALIGAIKKYLPEGPQYYPENQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + R ++ I+VE+ SQK I+IGK
Sbjct: 189 ERFIIAELIREKVLHLTREEVPHSVAVAIDAIQKREGGAVYVNATIIVERPSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK LK + AR DIE L KV+LE+ VKV+++WR L+ G+
Sbjct: 249 QGKMLKEIGKRARFDIEALLGSKVFLEVWVKVQKDWRNKMSQLRDLGF 296
>gi|304403961|ref|ZP_07385623.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9]
gi|304346939|gb|EFM12771.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9]
Length = 306
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 178/293 (60%), Gaps = 2/293 (0%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 13 HSGFVAIVGRPNVGKSTLMNHIIGQKIAIMSDKPQTTRNKIHGVYTKDDKQIVFLDTPGI 72
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L + M+K+ +A + + L+D + D + E + + K+ P+ LV+
Sbjct: 73 -HKPQSKLGNFMVKSAVNALDEVEAALFLIDVSEGIGGGDRFIIEQLKNVKNT-PVFLVM 130
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D +KP E+ K + Y+ D E+IP+SA G+ VE + + + LP GP YYP D
Sbjct: 131 NKIDKVKPEELLKIITQYKDLYDFAEIIPISALQGNNVETLLEQLGRYLPEGPQYYPADQ 190
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++HPE+F E+IREKI Q R E+P++ V + + + +I I VE++SQK
Sbjct: 191 ITDHPEQFVCAELIREKILHQTREEIPHSIAVTIEDMRVQENGVVYIGAVIFVERDSQKG 250
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + AR DIE L + +LE+ VKVK++WR E LK G+
Sbjct: 251 IIIGKQGALLKEVGKQARRDIETLLGSRTFLELWVKVKKDWRNSERTLKDLGF 303
>gi|392389914|ref|YP_006426517.1| GTP-binding protein Era [Ornithobacterium rhinotracheale DSM 15997]
gi|390520992|gb|AFL96723.1| GTP-binding protein Era [Ornithobacterium rhinotracheale DSM 15997]
Length = 295
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 182/295 (61%), Gaps = 19/295 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G++LSI+TNK QTTRHRI+GI + PE Q++ DTPG+++
Sbjct: 11 NIVGNPNVGKSTLMNQLVGERLSIITNKVQTTRHRIMGIVTTPEMQIVFSDTPGVLQPA- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ L S MM V A +AD I+ +V+ + E+L E + KL P+++++NK
Sbjct: 70 YELQSRMMNFVEEAFKDADIILYVVEPNEK-----ELLNEEFNEKLKKLNIPVIILINKI 124
Query: 233 DLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + + W+E+ E++P+SA G + + D I LP GP YYP+D ++
Sbjct: 125 DESTQEAMESAVNFWHEQLPKA-EILPISALEGFNTDLLLDKIKALLPYGPQYYPEDQLT 183
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF----IQVEIVVEKNSQ 347
+ ERF V E+IREKI Y+ E+PYA +V +K +D I +I VE++SQ
Sbjct: 184 DKSERFIVNEVIREKILENYQKEIPYAVEVVTERFK-----EDLHMIRIDADIYVERDSQ 238
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIG G +L + ARL +E F QKKVYL++ VKV++NWR+ + L+ +GY
Sbjct: 239 KGILIGHQGSSLSKVGKEARLALEKFFQKKVYLQLYVKVRKNWRKKDSDLERFGY 293
>gi|410668587|ref|YP_006920958.1| GTP-binding protein Era [Thermacetogenium phaeum DSM 12270]
gi|409106334|gb|AFV12459.1| GTP-binding protein Era [Thermacetogenium phaeum DSM 12270]
Length = 279
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 172/281 (61%), Gaps = 3/281 (1%)
Query: 122 VGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMM 181
+GKSTL N+ +G+K++IV++KPQTTR+RILGI + + Q + DTPGI K H L + M
Sbjct: 1 MGKSTLLNRFVGRKVAIVSDKPQTTRNRILGILTTEDAQAVFIDTPGI-HKPRHKLGAYM 59
Query: 182 MKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIA 241
+ ++ D ++ +VDA P +E + + + P++L LNK DL+K E+
Sbjct: 60 TRIAQNTLEEVDLVLYVVDASVPPGAGEEYILALL--RRVSTPVILALNKIDLVKKQELL 117
Query: 242 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 301
+EW+ + + EVIPVSA G +E + IL LP GP YYP ++V++ PERF E
Sbjct: 118 PLIEWFSERGNFLEVIPVSALTGENIESLNRSILENLPEGPFYYPVEMVTDQPERFIAAE 177
Query: 302 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKL 361
IIREK+ R EVP++ V V + RP ++ + VE++SQK ILIGKGGK LK
Sbjct: 178 IIREKVLNLTREEVPHSVVVVVEDMQERPNGMLYLAAVVYVERDSQKGILIGKGGKMLKE 237
Query: 362 LATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ AR ++E ++YLE+ VKVK+ WR DE L+ +GY
Sbjct: 238 IGRLAREELEVIFGNRIYLELWVKVKKGWRDDEAALRSFGY 278
>gi|320159556|ref|YP_004172780.1| GTP-binding protein era [Anaerolinea thermophila UNI-1]
gi|319993409|dbj|BAJ62180.1| GTP-binding protein era homolog [Anaerolinea thermophila UNI-1]
Length = 308
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 175/290 (60%), Gaps = 3/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N+ +GQK++ V+ +PQTTR R LGI + P+ QM+ DTPGI K +
Sbjct: 15 AVVGRPNVGKSTLMNRFLGQKIAAVSPRPQTTRRRQLGILTLPQAQMVFVDTPGI-HKPV 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP--ILLVLNKK 232
H L M + A +AD ++ LVDA P D + + + + + P +LL LNK
Sbjct: 74 HKLGEYMNQVALDALRDADVVLWLVDASVKPTDEDRLCAQRILEALGQNPANVLLALNKM 133
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + + A +L+ Y+ V+ +SA G G +D+ D IL +LP GP YY ++ +++
Sbjct: 134 DQVPEDQRAGRLKGYQDLLSSAWVVWISATSGAGTQDLLDEILRRLPEGPPYYEEEQITD 193
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
ER ++IRE + ++EVP+A V + YK R +I +++E+ S K I+I
Sbjct: 194 LYEREIAADLIREAALIHLKDEVPHAIAVRIDEYKERSEDTAYIAATLLLERESHKPIVI 253
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG+ LK + T ARL+IE +KV+L++ VKV ENWR + LL+ GY
Sbjct: 254 GKGGEMLKRIGTTARLEIESMSGRKVFLDLRVKVMENWRDNPALLRSLGY 303
>gi|452992448|emb|CCQ96073.1| GTP-binding protein [Clostridium ultunense Esp]
Length = 301
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 174/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQM+G K++I+++KPQTTR+RI GI + E Q+I DTPGI + +
Sbjct: 14 ALIGRPNVGKSTLMNQMVGTKIAIMSDKPQTTRNRIRGILTREEGQIIFLDTPGIHKPRT 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKLPILLVLNKKD 233
M MMK V + D +++L+D R DE I+ G +PI+LVLNK D
Sbjct: 74 RM-GQYMMKVVDQSIREVDLLLLLIDVEAGIGRGDEEIMNRLKGT---SIPIILVLNKID 129
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
I P + ++ F E+IPVSA G+ VE + + LP GP Y+P D ++
Sbjct: 130 KIAPEALLPLIDHVRHFLSFAEIIPVSALNGNNVEHLIQTLYRYLPEGPYYFPPDRKTDQ 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE F VGE+IREK + R EVP++ V + Y R +I+ + E+ SQK ILIG
Sbjct: 190 PETFLVGELIREKALNRLREEVPHSIAVEIEEYAEREHGTLYIRAVLYCERESQKGILIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K GK LK + AAR DIE KV+L++ VKVKE+WR EG+L+ G+
Sbjct: 250 KEGKMLKEIGQAARRDIESLFSTKVFLDLWVKVKEDWRNREGILRQLGF 298
>gi|308174317|ref|YP_003921022.1| GTP-binding protein [Bacillus amyloliquefaciens DSM 7]
gi|307607181|emb|CBI43552.1| GTP-binding protein [Bacillus amyloliquefaciens DSM 7]
Length = 301
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +++A + + DE + E +G + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ VE + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRTRYPFKEIVPISALEGNNVETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSIHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGALLKEIGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|429755609|ref|ZP_19288249.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|429173583|gb|EKY15101.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 293
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 183/290 (63%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQIVFSDTPGII-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ L + MM V+SA +AD ++ +V+ + E+ +E ++L P+LL++NK
Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFKRINQLDVPVLLLINKV 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + +++ ++++ E+ P+SA E + + I+ LP PA++ KD +++
Sbjct: 122 DTSDQNVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFQKDQLTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ SQK I+I
Sbjct: 182 KPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+ALK + AR D+E F K+++LE+ VKV ++WR + L+ +GY
Sbjct: 241 GHKGEALKRVGIEARTDLEKFFGKQIHLELFVKVNKDWRNNVRQLRRFGY 290
>gi|374853188|dbj|BAL56103.1| GTP-binding protein Era [uncultured Acidobacteria bacterium]
Length = 302
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 177/288 (61%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N++IGQK++ V++KPQTTR RI GI + PE Q+I DTPG I K I
Sbjct: 16 ALIGRPNVGKSTLLNRLIGQKIAAVSDKPQTTRWRIRGILTRPEGQIIFVDTPG-IHKPI 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H ++ MM+ V +A + D ++++ D ++ D + E V + P L+LNK D
Sbjct: 75 HRMNERMMRAVEAAIADVDLLLLMTDVTESFGSGDRFVLEMV--KRAGKPTFLLLNKIDR 132
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K ++ ++ Y + D E +P+SA G GV+ + + LP GP YYP+ +++
Sbjct: 133 LKDKRQLLPLIDRYRREYDFVEYLPISALTGEGVDLLLQSLFEHLPEGPLYYPEGEITDQ 192
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PER V EI+REK+ M R E+PY V S+K I I+VE+ SQK I+IG
Sbjct: 193 PERVLVAEIVREKLLMVTREEIPYVTAVYTESFKEE-NGLLRIHCVILVERESQKPIIIG 251
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
KGG+ LK + T AR +IE KKV+LE+ VKV+E WR+++ LL G
Sbjct: 252 KGGERLKRIGTLAREEIEFLFGKKVFLELYVKVREKWRENDALLTQLG 299
>gi|222151466|ref|YP_002560622.1| GTP-binding protein Era [Macrococcus caseolyticus JCSC5402]
gi|222120591|dbj|BAH17926.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 300
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N+++GQK++I+++K QTTR+++ G+ + + Q+I DTPGI + K
Sbjct: 11 AIIGRPNVGKSTFMNKVLGQKVAIMSDKAQTTRNKVQGVLTTEQSQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
HML MMK ++ D I+ +V+ ++ R DE + E + + ++ PI LVLNK D
Sbjct: 70 HMLGDYMMKVAKNTLREVDAILFMVNVEESIGRGDEFIIELLKN--NRTPIFLVLNKIDK 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ K++E Y+ E++P+SA G+ V+ + I +P GP YYPKD +S+HP
Sbjct: 128 IHPDELIKEIEKYKDLLPFAEIVPISALQGNNVDHLVKVIERYMPEGPMYYPKDQISDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F V E+IREK E+P+A V V + I+ I +E+ SQK I+IGK
Sbjct: 188 EEFIVAELIREKALHLTSQEIPHAIGVQVEKMVKESEERVHIEATIYIERESQKGIIIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KVYLE+ VKV+++WR ++ GY
Sbjct: 248 QGSMLKKIGQLARKDIEMLLGSKVYLELWVKVQKDWRNKPNFIRQIGY 295
>gi|403237533|ref|ZP_10916119.1| GTPase Era [Bacillus sp. 10403023]
Length = 303
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N +IGQK++I+++KPQTTR+++ G+ + + Q+I DTPGI + K
Sbjct: 13 SIIGRPNVGKSTFLNHVIGQKIAIMSDKPQTTRNKVQGVLTEEDSQIIFIDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +++A + R DE + E + + + P+ LV+NK D
Sbjct: 72 HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGRGDEFIIERLKNIQT--PVFLVVNKIDQ 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ + +E Y+ E++P+SA G + + I T LP GP YYP D V++HP
Sbjct: 130 IHPDKLLELIEKYKGLYPFKEIVPISALQGTNTSRLVEQIKTYLPEGPQYYPADQVTDHP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF + E+IREK+ R E+P++ V + S + R ++ I+VE+NSQK I+IG
Sbjct: 190 ERFIITELIREKVLHLTREEIPHSIAVVMDSLERREGGNTVYVGATIIVERNSQKGIIIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L KVYLE+ VKV+++WR L+ +G+
Sbjct: 250 KQGSMLKEVGKRARADIEALLGSKVYLELWVKVQKDWRNKMSQLRDFGF 298
>gi|384160176|ref|YP_005542249.1| GTPase Era [Bacillus amyloliquefaciens TA208]
gi|384165106|ref|YP_005546485.1| GTP-binding protein [Bacillus amyloliquefaciens LL3]
gi|384169246|ref|YP_005550624.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328554264|gb|AEB24756.1| GTPase Era [Bacillus amyloliquefaciens TA208]
gi|328912661|gb|AEB64257.1| GTP-binding protein [Bacillus amyloliquefaciens LL3]
gi|341828525|gb|AEK89776.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
Length = 301
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +++A + + DE + E +G + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ VE + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRTRYPFKEIVPISALEGNNVETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSIHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGALLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|154686789|ref|YP_001421950.1| GTP-binding protein Era [Bacillus amyloliquefaciens FZB42]
gi|384266139|ref|YP_005421846.1| GTP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387899162|ref|YP_006329458.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|394992072|ref|ZP_10384865.1| GTPase Era [Bacillus sp. 916]
gi|429505937|ref|YP_007187121.1| GTPase Era [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|154352640|gb|ABS74719.1| Era [Bacillus amyloliquefaciens FZB42]
gi|380499492|emb|CCG50530.1| GTP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387173272|gb|AFJ62733.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|393807088|gb|EJD68414.1| GTPase Era [Bacillus sp. 916]
gi|429487527|gb|AFZ91451.1| GTPase Era [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 301
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +++A + + DE + E +G + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ VE + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRTRYPFKEIVPISALEGNNVETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGALLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|330752593|emb|CBL87539.1| GTP-binding protein era homolog [uncultured Flavobacteriia
bacterium]
Length = 295
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 175/288 (60%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G PNVGKST N ++G +SIVT K QTTRHRILGI +G +Q++ DTPGII+
Sbjct: 13 SIIGNPNVGKSTFMNALLGLDISIVTPKAQTTRHRILGIVNGHNFQVVFSDTPGIIKPSY 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M +SMM V+ A +AD I+ +V A + ++L + K K P+ +++NK D
Sbjct: 73 EMQNSMM-NFVKDALKDADIIIYMVTAKDENLKDQKLLNQ---IKKTKSPLFVLINKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ KK+ +++ + V P+SA G + ++ + I +P PAY+PKD +++ P
Sbjct: 129 STQKLVEKKVSYWKTIFPLANVYPISALNGFFISEVFNSIKELIPNSPAYFPKDQITDKP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IR++I +Y+NE+PY+ +V +K P V I+VE+ SQK I+IG
Sbjct: 189 ERFFVNESIRKQILQRYKNEIPYSVEVITEEFKESPKIIKINSV-IIVERESQKGIIIGH 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK + AR +++F KK+YLE+ VKV +NWR + LK GY
Sbjct: 248 RGNALKQVGINARKSLQNFFGKKIYLELHVKVSKNWRSNNEQLKKLGY 295
>gi|153809062|ref|ZP_01961730.1| hypothetical protein BACCAC_03370 [Bacteroides caccae ATCC 43185]
gi|423216735|ref|ZP_17203231.1| GTP-binding protein Era [Bacteroides caccae CL03T12C61]
gi|149128395|gb|EDM19614.1| ribosome biogenesis GTPase Era [Bacteroides caccae ATCC 43185]
gi|392629265|gb|EIY23272.1| GTP-binding protein Era [Bacteroides caccae CL03T12C61]
Length = 293
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 182/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMEKV---RQMTVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVKLVEEWKELLPQAEIIPISAASKFNVDYVMKRIKELLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I+ I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVAVEEFKEE-AKKIHIRAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR ++E F K +YLE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRELERFFGKTIYLETYVKVDKDWRSSDKELRNFGY 290
>gi|294675552|ref|YP_003576168.1| GTP-binding protein Era [Prevotella ruminicola 23]
gi|294472154|gb|ADE81543.1| GTP-binding protein Era [Prevotella ruminicola 23]
Length = 295
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 180/291 (61%), Gaps = 7/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + PE Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTPEMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + PE+ + L + K +P+LL++NK D
Sbjct: 68 KLQESMLAFS-ESALQDADVLLYVTDVVENPEKNMDFLAKV---QKLDMPVLLLINKIDE 123
Query: 235 IKPG--EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
+ G ++A +E + E++P+SAK GV+ + I LP PAY+ KD +++
Sbjct: 124 LTGGNAQLAAIVEKWHALLPKAEILPISAKNKFGVDMLLKRIQELLPESPAYFDKDQLTD 183
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
P RFFV EIIREKI + Y E+PY+ +V V +K I I VE++SQK I+I
Sbjct: 184 KPARFFVSEIIREKILLYYDKEIPYSVEVAVERFK-EDDKHIHINAIIYVERDSQKGIII 242
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G ALK ++T AR +E F K ++LEI VKV ++WR E L H+GY
Sbjct: 243 GHQGVALKKVSTEARKSLEKFFAKPIFLEIFVKVDKDWRSSEKELNHFGYN 293
>gi|336426709|ref|ZP_08606718.1| GTP-binding protein Era [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336010725|gb|EGN40707.1| GTP-binding protein Era [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 312
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 187/312 (59%), Gaps = 17/312 (5%)
Query: 101 EIEEFDYASHP-NHK------SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGI 153
++EE A P N K +++G+PNVGKSTL N+++GQK+SI +NKPQTTR+RI +
Sbjct: 2 DLEELLAAGRPLNEKYKSGFATLIGRPNVGKSTLMNRLVGQKISITSNKPQTTRNRIQAV 61
Query: 154 CSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDE 210
+ E Q++ DTPGI K + L + M+K + D I+ LV+ A ER
Sbjct: 62 YTSEEGQIVFLDTPGINRAK-NKLGNYMLKAAEGTLRDVDVILWLVEPTTYIGAGERY-- 118
Query: 211 ILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDI 270
I+E+ K K P++LV+NK D +K ++ ++ Y K D EV+PVSA+ G + +
Sbjct: 119 IIEQL---KKTKTPVILVINKTDTVKKDDVFPAIDTYRKELDFAEVVPVSARCGTNTDTL 175
Query: 271 RDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP 330
IL LP G +Y +D V++ PER V E+IREK E+P+ V + S K R
Sbjct: 176 ISCILKYLPYGQPFYDEDTVTDQPERQIVAELIREKALRSLDEEIPHGIAVAIESMKYRK 235
Query: 331 TAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENW 390
D I+ I+ EK+S K I+IGKGG+ LK + + AR +IED LQ KV L++ VKVK++W
Sbjct: 236 NIAD-IEATIICEKDSHKGIIIGKGGQMLKTIGSKARPEIEDMLQCKVNLQLWVKVKKDW 294
Query: 391 RQDEGLLKHYGY 402
R + LLK++GY
Sbjct: 295 RDSDFLLKNFGY 306
>gi|224476675|ref|YP_002634281.1| GTP-binding protein Era [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254783663|sp|B9DNL3.1|ERA_STACT RecName: Full=GTPase Era
gi|222421282|emb|CAL28096.1| putative GTP-binding protein Era [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 299
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N+++G K++I+++K QTTR++I G+ + + Q+I DTPGI + K
Sbjct: 10 AIIGRPNVGKSTFMNRVLGHKIAIMSDKAQTTRNKIHGVMTEDDAQIIFVDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +V+A + R DE + E + + K P+ LV+NK DL
Sbjct: 69 HKLGDYMMKVAKNTLTEVDAVIFMVNANEEIGRGDEYIMEMLKN--IKTPVFLVINKIDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P +I +E YEK E +P+SA G V+ + + + +P GP YYP +S+HP
Sbjct: 127 VHPDQIMPIIESYEKHMHFTEAVPMSALEGLNVDHFINVLKSYMPEGPQYYPDGQISDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V E+IREK+ E+P++ VNV + + I+ I VE++SQK I+IGK
Sbjct: 187 EQFVVSELIREKVLHLTSEEIPHSIGVNVDRMVKQSEDRVRIEATIYVERDSQKGIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR+DIE+ L KVYL++ VKV+++WR ++ GY
Sbjct: 247 GGKKLKEIGKRARIDIENLLGSKVYLDLWVKVQKDWRNKVNFIRQMGY 294
>gi|89100470|ref|ZP_01173332.1| Era [Bacillus sp. NRRL B-14911]
gi|89084813|gb|EAR63952.1| Era [Bacillus sp. NRRL B-14911]
Length = 309
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 180/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q I DTPGI + K
Sbjct: 19 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNDAQFIFIDTPGIHKPK- 77
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +V+A + R +E + E K PI LV+NK D
Sbjct: 78 HKLGDFMMKIAQNTLKEVDLILFMVNAEEGFGRGEEFIIEKF--QNVKTPIFLVINKIDQ 135
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ +E Y++ E+IP+SA G+ V+ + + I +P GP +YP D V++HP
Sbjct: 136 IHPDKLFSIIESYKEKYGFKEIIPISALEGNNVDTLLEQIKQYIPEGPQFYPADQVTDHP 195
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF V E+IREK R E+P++ V V+ R KD I V ++VE++SQK I+I
Sbjct: 196 ERFIVSELIREKALHLTREEIPHSLAV-VIDKMERREDKDVINVMATVIVERDSQKGIVI 254
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + AR DIE+ L KVYLE+ VKV+++WR L+ +G+
Sbjct: 255 GKQGAMLKEIGKRARTDIENLLGSKVYLELWVKVQKDWRNKMSQLRDFGF 304
>gi|406885304|gb|EKD32537.1| hypothetical protein ACD_77C00062G0001 [uncultured bacterium]
Length = 302
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 182/294 (61%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G+++SIVT K QTTRHRI+GI +G +YQ++ DTPG
Sbjct: 11 HKSGFVNIIGNPNVGKSTLMNALVGERISIVTAKAQTTRHRIMGIVNGEDYQIVYSDTPG 70
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
I+ K + L MM V +A +AD I+ + D + + +E +E+ ++ P++LV
Sbjct: 71 IL-KPSYRLQESMMNFVETAIGDADIILYVTDVVEQSTKNEEYIEKL---NRVSSPVILV 126
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D+ +I + +++ E+ P+SA + + + IL +P PA+Y KD
Sbjct: 127 INKIDISNQKDIEELYARWKELVPKAEIFPISATEKFNTDTLFNRILELIPESPAWYDKD 186
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
I+++ RFF EIIREKI + Y EVPY+ +V + ++ + I V ++SQK
Sbjct: 187 ILTDRNLRFFASEIIREKILLNYDKEVPYSTEVVIEMFQEEGGLYK-VDAVIYVMRDSQK 245
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGG ALK + T AR D+E F +KKV+L+I VKV +WR+D+ L+ +GY
Sbjct: 246 GIIIGKGGSALKKVGTEARKDMESFFEKKVFLQIFVKVNTDWREDKRKLRQFGY 299
>gi|381210387|ref|ZP_09917458.1| GTP-binding protein [Lentibacillus sp. Grbi]
Length = 300
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST NQ+IGQK++I+++K QTTR+RI G+ + + Q++ DTPGI + K
Sbjct: 11 AIIGRPNVGKSTFMNQIIGQKIAIMSDKAQTTRNRIQGVLTSDDAQLVFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K D ++ +++A + + D+ + + + K K P+ LV+NK DL
Sbjct: 70 HRLGDFMVKVAEDTLNEVDAVLFMINAKEGYGKGDQYILDRL--QKVKRPVFLVINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++ Y+ + +E+IP+SA G+ + + + +P GP YYP+D V++HP
Sbjct: 128 VHPDNLLPLIDSYKDKYNFEEIIPISALQGNNLTHLLAELKKHIPEGPQYYPEDHVTDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V E+IREK+ R EVP++ V + + + R + FIQ ++ E+ +QK I+IGK
Sbjct: 188 ERFIVTELIREKVLELTREEVPHSIAVVLENMEKRASNAVFIQATVITERQTQKGIVIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KVYLE+ VKV+++WR + L +G+
Sbjct: 248 QGAMLKNIGKNARRDIESLLGSKVYLELWVKVRKDWRNKQSQLHEFGF 295
>gi|414154882|ref|ZP_11411199.1| GTPase Era [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453713|emb|CCO09103.1| GTPase Era [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 302
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++KPQTTRH+I + + P+ Q++ DTPGI K
Sbjct: 14 ALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLTRPDAQIVFLDTPGI-HKPR 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M++ +A D ++ LV+A P D + E + + K P+ L++NK DL
Sbjct: 73 HKLGEYMVEVALNALKEVDVVLFLVEATDPPGAGDRYIAEQL--KQIKTPVFLMINKIDL 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K ++ + Y+ EVIPVSA G VE + D I++ LP GP YYP D++++ P
Sbjct: 131 VKKEDVLASIVRYKDLLPFAEVIPVSALAGDNVERLIDTIVSYLPAGPQYYPADMITDRP 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + EIIREK+ EVP++ V V + + I E++SQK ILIGK
Sbjct: 191 ERFIMAEIIREKVLHLTSEEVPHSVAVVVEQVQANNNGVVVVNAVIYTERDSQKAILIGK 250
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + AR +IE+ L +VYLE+ VKVK++WR L+++G+
Sbjct: 251 GGAMLKEVGRRAREEIENLLGSRVYLELWVKVKKDWRNKMADLRNFGF 298
>gi|410460487|ref|ZP_11314165.1| GTPase Era [Bacillus azotoformans LMG 9581]
gi|409927102|gb|EKN64248.1| GTPase Era [Bacillus azotoformans LMG 9581]
Length = 302
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 186/299 (62%), Gaps = 8/299 (2%)
Query: 109 SHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 164
S+ N+KS ++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + Q+I
Sbjct: 2 SNENYKSGFVSIIGRPNVGKSTFLNKVIGQKIAIMSDKPQTTRNKIQGVYTTDHSQIIFI 61
Query: 165 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 224
DTPGI + K H L MMK ++ D I+ +++A + + D+ + E + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLNEVDLILFMINAVEGFGKGDQFIIERL--KQTNQP 118
Query: 225 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
+ LV+NK D + P E+ ++ Y++ E+IP+SA G+ V + + I +P GP Y
Sbjct: 119 VFLVINKIDQVHPDELITLIDQYKEMYPFKEIIPISALEGNNVTTLLEQIEKYMPNGPQY 178
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVE 343
YP D V++HPERF + E+IREK+ R E+P++ V + S + R +I I+VE
Sbjct: 179 YPADQVTDHPERFIITELIREKVLHLTREEIPHSIAVVMDSLERRGDGNTVYIAATIIVE 238
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++SQK I+IGK GK LK + AR+DIE L KV+LE+ VKV+++WR L+ +G+
Sbjct: 239 RDSQKGIVIGKQGKMLKEVGRLARIDIEALLGSKVFLELWVKVQKDWRNRLNQLRDFGF 297
>gi|385265527|ref|ZP_10043614.1| GTP-binding protein Era [Bacillus sp. 5B6]
gi|385150023|gb|EIF13960.1| GTP-binding protein Era [Bacillus sp. 5B6]
Length = 301
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +++A + + DE + E +G + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRTRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGALLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|312869116|ref|ZP_07729290.1| ribosome biogenesis GTPase Era [Lactobacillus oris PB013-T2-3]
gi|417885590|ref|ZP_12529744.1| ribosome biogenesis GTPase Era [Lactobacillus oris F0423]
gi|311095362|gb|EFQ53632.1| ribosome biogenesis GTPase Era [Lactobacillus oris PB013-T2-3]
gi|341595512|gb|EGS38161.1| ribosome biogenesis GTPase Era [Lactobacillus oris F0423]
Length = 301
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 179/297 (60%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + + Q+I D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNYIVGQKVAIMSNVAQTTRNKIQGIYTSKDAQIIFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPG+ K L M ++ SA D IV +V A + D + E + + + PI
Sbjct: 63 TPGV-HKPATKLGDFMERSTLSALDEVDAIVYVVSATEKRGPGDNFIIERL--KQVQQPI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D + P ++ ++ Y+ +IPVSA G+ V ++ + ++ LP GP YY
Sbjct: 120 YLVVNKIDQVHPNDLPGIVDQYKGSLPFKGIIPVSALQGNNVNELINELVAGLPNGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D +S+HPERF + E+IREK+FM R+EVP++ V+V S + I IVVE+
Sbjct: 180 PADQISDHPERFVIAEMIREKVFMLTRDEVPHSVAVDVTSIQREDAEHVHISANIVVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGK G+ LK + T AR DIE L +V+L++ VKV WR +LK YGY
Sbjct: 240 GQKGIIIGKKGQMLKKIGTLARQDIERLLGDRVFLQLWVKVVPKWRDKSAMLKDYGY 296
>gi|168187762|ref|ZP_02622397.1| GTP-binding protein Era [Clostridium botulinum C str. Eklund]
gi|169294368|gb|EDS76501.1| GTP-binding protein Era [Clostridium botulinum C str. Eklund]
Length = 294
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++G+KLSIV+ +PQTTR+ I + + +YQ++ DTPGI K
Sbjct: 8 SIIGRPNVGKSTLTNDILGEKLSIVSCRPQTTRNNIRAVLTRDDYQLVFLDTPGI-HKPR 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K ++ D IV + + DE++ E + + K P+ LV+NK D
Sbjct: 67 HKLGEYMVKAAETSTDEVDLIVFITTPEGEISKGDELILENIKNRKK--PVFLVINKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+A+ L+ Y ++ D E+IP+SA+ V+ + + ++ +P GP YYP+D++++
Sbjct: 125 NPQELVAETLQKYSEYMDFAEIIPISARKSKNVDTLLNLMIKYMPEGPKYYPEDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EIIREK EVP+ V ++S K I ++ EK+S K I+IGK
Sbjct: 185 ERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQTKRGTYHIDANLLCEKDSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ LK ++T AR DIE FL KV L++ VKVK+ WR +LK GY
Sbjct: 245 GGQKLKKISTYARQDIEKFLNNKVNLKVWVKVKKEWRDSNFMLKELGY 292
>gi|259503181|ref|ZP_05746083.1| GTP-binding protein Era [Lactobacillus antri DSM 16041]
gi|259168838|gb|EEW53333.1| GTP-binding protein Era [Lactobacillus antri DSM 16041]
Length = 301
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 179/304 (58%), Gaps = 21/304 (6%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + + Q+I D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNYIVGQKVAIMSNVAQTTRNKIQGIYTSKDAQIIFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------ 219
TPG+ K L M ++ SA D IV +V A + + G GD+
Sbjct: 63 TPGV-HKPATKLGDFMERSTLSALDEVDAIVYVVSATE---------KRGPGDNFIIDRL 112
Query: 220 -KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 278
+ K P+ LV+NK D + P ++ + Y+ +IPVSA G+ V ++ + ++ L
Sbjct: 113 KQVKQPVYLVVNKIDQVHPNDLPDIVAQYKDALPFKGIIPVSALQGNNVNELINELVAGL 172
Query: 279 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 338
P GP YYP D +S+HPERF + E+IREK+FM R+EVP++ V+V S + I
Sbjct: 173 PHGPQYYPADQISDHPERFVIAEMIREKVFMLTRDEVPHSVAVDVTSIQREDAEHVHISA 232
Query: 339 EIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLK 398
IVVE+ QK I+IGK G+ LK + T AR DIE L +V+L++ VKV WR +LK
Sbjct: 233 NIVVERPGQKGIIIGKKGQMLKKIGTMARQDIERLLGDRVFLQLWVKVVPKWRDKSAMLK 292
Query: 399 HYGY 402
YGY
Sbjct: 293 DYGY 296
>gi|220932088|ref|YP_002508996.1| GTP-binding protein Era [Halothermothrix orenii H 168]
gi|259645948|sp|B8CXI2.1|ERA_HALOH RecName: Full=GTPase Era
gi|219993398|gb|ACL70001.1| GTP-binding protein Era [Halothermothrix orenii H 168]
Length = 294
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PNVGKSTL N +IGQK+ I + +PQTTR+ + GI + PE Q++ DTPGI K
Sbjct: 9 SVIGRPNVGKSTLINNLIGQKVVITSPRPQTTRNSVRGIYTRPEGQIVFVDTPGI-HKAR 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ LD+ M++ + + D I+ +VD + + DE + + ++P+++ +NK D
Sbjct: 68 NKLDNYMLEKAYESLEDIDVIIFMVDGNYSFGKGDEFIYNQI--KGVRVPVIVAMNKIDR 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I + ++ + YE+ T VIP+SA G ++ + + I T LP GP YYP+D+V++
Sbjct: 126 INKEIVMERQKNYEERTGFP-VIPISASRGTNLDTLVEEIFTFLPEGPQYYPEDMVTDQI 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V E+IREK+F+ R EVPY V + K R + +I+ I EK S K I+IG
Sbjct: 185 EQFVVAELIREKVFILTREEVPYGVAVKIEEMKERDNSTMYIRANIYAEKKSHKKIIIGH 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
GK +K + AR +IE LQ KVYL++ VK++++WR+ EGL+K GY G
Sbjct: 245 KGKMIKKIGRLAREEIEKLLQTKVYLDLWVKIEKDWREKEGLVKRMGYKG 294
>gi|325954893|ref|YP_004238553.1| GTP-binding protein Era-like-protein [Weeksella virosa DSM 16922]
gi|323437511|gb|ADX67975.1| GTP-binding protein Era-like-protein [Weeksella virosa DSM 16922]
Length = 295
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 187/288 (64%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++ ++L I T+K QTTRHRI GI +G YQ++ DTPG+I+
Sbjct: 13 NIIGNPNVGKSTLMNLLMKERLVIATHKAQTTRHRIKGILTGENYQIVFSDTPGVIDPA- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L ++MM +V+ + I+AD ++ +V+ + + +EI E+ + +P L++LNK DL
Sbjct: 72 YELQNLMMDSVKESLIDADVLLYVVEVGEKRMKNEEIFEKI---QQTNVPTLILLNKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + ++ + +++P+SAK ++ + + I+ LP GP YYP+D +++
Sbjct: 129 VSQEKLDQAVDHWHALLPNAQILPISAKENFNIDLLINKIIELLPNGPMYYPEDQLTDRS 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V E+IREKI + Y E+PYA +V +K T +I+ +I VE++SQK I+IG+
Sbjct: 189 ERFIVNEVIREKILLHYEKEIPYAVEVVTERFKEEMTMI-YIEADIYVERDSQKGIIIGR 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+AL + AR ++E F KKV+L++ VKVK++WR+ + L+ +GY
Sbjct: 248 KGEALSRVGKEAREELEKFFDKKVFLKLYVKVKKDWRKRDIDLRRFGY 295
>gi|375363061|ref|YP_005131100.1| era-like GTP-binding protein [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421730953|ref|ZP_16170079.1| GTPase Era [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|451346265|ref|YP_007444896.1| GTPase Era [Bacillus amyloliquefaciens IT-45]
gi|371569055|emb|CCF05905.1| era-like GTP-binding protein [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407075107|gb|EKE48094.1| GTPase Era [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|449850023|gb|AGF27015.1| GTPase Era [Bacillus amyloliquefaciens IT-45]
Length = 301
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +++A + + DE + E +G + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ VE + + LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRARYPFKEIVPISALEGNNVETLLAQVEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGALLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|402834352|ref|ZP_10882954.1| GTP-binding protein Era [Selenomonas sp. CM52]
gi|402277970|gb|EJU27036.1| GTP-binding protein Era [Selenomonas sp. CM52]
Length = 297
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + P+ Q++ DTPGI K
Sbjct: 12 AVVGRPNVGKSTLINSLIGQKIAIMSDKPQTTRTRILCILTEPDAQIVFLDTPGI-HKPR 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M++ S D + +VDA + + + E + K P +LV+NK DL
Sbjct: 71 HKLGEYMVRAAESTLKEVDAVFFVVDATEKMGPGERYIVERL--QATKCPCILVVNKLDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+ + LE Y K +P+SAK ++ + + LP GPAYYP+D+V++ P
Sbjct: 129 IEKPAVLPILESYMKVYPFAGAVPISAKEEVNLDSLLAEVKKYLPEGPAYYPEDMVTDQP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER V E++REK + R+E+P+A V++ K RP +I+ I VE+ SQK I+IG
Sbjct: 189 ERLIVAELVREKALLATRDELPHAIAVDLDEMKERPKGGFYIRATIYVERESQKGIVIGA 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G L+ + AR DIE L KV+L++ VKVK++WR EG+L ++G+
Sbjct: 249 KGALLREIGAQARKDIEMLLGAKVFLDLWVKVKKDWRNREGVLHNFGF 296
>gi|373110948|ref|ZP_09525210.1| GTP-binding protein Era [Myroides odoratimimus CCUG 10230]
gi|423132224|ref|ZP_17119874.1| GTP-binding protein Era [Myroides odoratimimus CCUG 12901]
gi|423136040|ref|ZP_17123685.1| GTP-binding protein Era [Myroides odoratimimus CIP 101113]
gi|423329808|ref|ZP_17307614.1| GTP-binding protein Era [Myroides odoratimimus CCUG 3837]
gi|371639245|gb|EHO04863.1| GTP-binding protein Era [Myroides odoratimimus CIP 101113]
gi|371639993|gb|EHO05602.1| GTP-binding protein Era [Myroides odoratimimus CCUG 12901]
gi|371641824|gb|EHO07404.1| GTP-binding protein Era [Myroides odoratimimus CCUG 10230]
gi|404602716|gb|EKB02403.1| GTP-binding protein Era [Myroides odoratimimus CCUG 3837]
Length = 295
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 183/290 (63%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G +YQ++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDYQIVFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+SA +AD ++ +V+ + E DE + + K+P++L+LNK D
Sbjct: 68 YELQESMMDFVKSAFEDADVLIYMVEIGER-ELKDEAFFARINN--SKVPVMLLLNKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ +++ W EK + E+ P+SA + + D I+ LP+ P Y+PKD +++
Sbjct: 125 SNQEQLEEQVTLWSEKVPNA-EIFPISALEKFNTQAVYDRIIELLPVSPPYFPKDALTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERFFV EIIREKI + Y EVPYA +V +K I+ I+VE++SQK I+IG
Sbjct: 184 SERFFVNEIIREKILLNYDKEVPYAVEVETEEFKEEENIIR-IKAVIMVERDSQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR ++E F KKV+LE+ VKV ++WR + L+ +GY
Sbjct: 243 HKGAALKKVGITAREEMEQFFMKKVHLELFVKVNKDWRSSDYQLRRFGYN 292
>gi|311069130|ref|YP_003974053.1| GTP-binding protein Era [Bacillus atrophaeus 1942]
gi|419820222|ref|ZP_14343834.1| GTPase Era [Bacillus atrophaeus C89]
gi|310869647|gb|ADP33122.1| GTP-binding protein Era [Bacillus atrophaeus 1942]
gi|388475634|gb|EIM12345.1| GTPase Era [Bacillus atrophaeus C89]
Length = 301
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QHTSTPVFLIVNKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ +E + + LP GP +YP D V++HP
Sbjct: 129 IHPDKLLLLIDEYRVRYPFKEIVPISALEGNNIETLLTQVEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V++ S K R + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVSIESIKARENGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 QGSLLKEVGKRARTDIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|145220317|ref|YP_001131026.1| GTP-binding protein Era [Chlorobium phaeovibrioides DSM 265]
gi|145206481|gb|ABP37524.1| GTP-binding protein Era [Chlorobium phaeovibrioides DSM 265]
Length = 308
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 178/302 (58%), Gaps = 22/302 (7%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G PN GKSTL N ++ KLSIVT+KPQTTR +I GI S Q+I DTPGI+E +
Sbjct: 15 SIIGPPNAGKSTLLNALLDCKLSIVTHKPQTTRKKITGIYSDDSTQIIFLDTPGIMEPQ- 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL-----PILLVL 229
L M+K R +AD I+ L+ K D E + H+D L P++ V
Sbjct: 74 QKLHEAMLKVTRDTLKDADAIIALLPFSKKNGPFDRAFAEEL--HRDWLKNSGKPLIAVF 131
Query: 230 NKKDLI-----KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
NK DL+ K E + EW + ++ +SA G G++++ D + LP+
Sbjct: 132 NKSDLVNAEQQKEAEAFIRREW-----NPAAILSISALNGKGLQELVDALRPYLPMHDPL 186
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEI 340
YP+D +S PERFF EIIREKIF+ Y EVPY+ +V V ++ + P KD I+ I
Sbjct: 187 YPEDALSTAPERFFASEIIREKIFLLYGREVPYSAEVVVDEFREQHENDPKRKDLIRCSI 246
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
+VE+++QK I+IG G+ALK L +AR +IE L + ++LE+ VKV+ +WR+ + LLK Y
Sbjct: 247 IVERDTQKQIIIGHKGQALKKLGQSARQEIEQLLGRPIFLELFVKVRPDWRKKQTLLKSY 306
Query: 401 GY 402
GY
Sbjct: 307 GY 308
>gi|430881496|ref|ZP_19483993.1| GTPase Era [Enterococcus faecium E1575]
gi|430556931|gb|ELA96418.1| GTPase Era [Enterococcus faecium E1575]
Length = 299
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 189/296 (63%), Gaps = 7/296 (2%)
Query: 111 PNHKSV----LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS +G+PNVGKSTL N+++GQK++I++NK QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSNKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIIIGKGGKMLKQVGTKARKDIENLLGDKVFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|456011645|gb|EMF45382.1| GTP-binding protein Era [Planococcus halocryophilus Or1]
Length = 305
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 182/295 (61%), Gaps = 15/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N+++GQK++I+++KPQTTR+++ G+ + + QMI DTPGI E +
Sbjct: 14 SIIGRPNVGKSTFLNRVVGQKIAIMSDKPQTTRNKVQGVVTTNDSQMIFIDTPGINEPR- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVL---VDACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
H L M+K ++ D ++ + VD +R + +G+ +P+ LVLNK
Sbjct: 73 HKLGDFMLKVAKNTFREVDVLLFVASGVDRVGKEDRYVLEMLKGI-----DVPVFLVLNK 127
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + P + K +E Y K D E IP+SA G+ VE + I +LP GP YYP D ++
Sbjct: 128 IDQVHPDNLPKIIESYRKEFDFAEAIPISALEGNNVETLLAKINERLPEGPQYYPADQIT 187
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD----FIQVEIVVEKNSQ 347
+HPERF + E+IREK R E+P++ + VV K P +++ IQ I+VE++SQ
Sbjct: 188 DHPERFIISELIREKALHLTREEIPHS--IAVVIEKIAPDSENENMIRIQATIMVERDSQ 245
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGK G LK + T AR DIE+ L KVYLE+ VKV+++WR L+ +G+
Sbjct: 246 KGIVIGKKGVLLKQIGTRARQDIENLLGSKVYLELWVKVQKDWRNKAMHLRDFGF 300
>gi|56963446|ref|YP_175177.1| Era, Era/TrmE family GTP-binding protein [Bacillus clausii KSM-K16]
gi|81822138|sp|Q5WHD9.1|ERA_BACSK RecName: Full=GTPase Era
gi|56909689|dbj|BAD64216.1| Era/TrmE family GTP-binding protein Era [Bacillus clausii KSM-K16]
Length = 303
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 179/292 (61%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N++IGQK++I+++KPQTTR+++ G+ + + Q++ DTPGI + K
Sbjct: 14 SIIGRPNVGKSTLLNRVIGQKIAIMSDKPQTTRNKVQGVLTRDDAQLVFMDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCI--VVLVDACKAP--ERIDEILEEGVGDHKDKLPILLVLN 230
H L MMK ++ D I VV DA P + I E L+E K P+ L++N
Sbjct: 73 HRLGDFMMKVAKNTLREVDLILYVVEADAKFGPGEQYIIERLQE------TKTPVFLLIN 126
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D + P E+ K ++ Y+ E+IP+SA G+ V + + I+ + GP YYP D V
Sbjct: 127 KIDKVSPEELLKVIDLYKDRYPFAEIIPISALEGNNVPTLVEQIVEHMEEGPQYYPADQV 186
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++HPERF + E+IREK+ + E+P++ V + K R K ++ ++VE++SQK I
Sbjct: 187 TDHPERFIIAELIREKVLHLTKEEIPHSVAVVIEQIKKRDNGKVYVGATVIVERSSQKGI 246
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+IGK G LK + AR DIE L VYLE+ VKV+++WR LK YG+
Sbjct: 247 IIGKHGAMLKEVGQLARSDIEALLGSSVYLELWVKVQKDWRNRPSQLKDYGF 298
>gi|404493025|ref|YP_006717131.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380]
gi|77545089|gb|ABA88651.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380]
Length = 303
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 182/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I +NKPQTTR+RILGI + P+ Q++ DTPG+ + K
Sbjct: 17 AIIGRPNVGKSTLLNSVLGQKIAITSNKPQTTRNRILGIYNQPDAQVLFLDTPGVHKAK- 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
ML+ M+ S + D +++LV+A D+ + E V + +P++LV+NK DL
Sbjct: 76 GMLNRYMVDQALSTCGDVDVVLMLVEANDRLGGGDDYVLEQVS--RSNVPVILVINKVDL 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I E+ +E Y E+IPVSA G G E + ++ LP GP YY +D+V++ P
Sbjct: 134 IHRPELLPLIEAYTGKYAFSEIIPVSALTGEGTEQLVSSLVKYLPEGPRYYAEDMVTDLP 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERF V E+IRE+I Q E+P+ V V ++ +P K+ + +E I V + K I++
Sbjct: 194 ERFIVAEMIREQILKQTHQEIPHGVAVEVDHFEEKP-EKNLVVIEACIYVSREGHKKIVL 252
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+GG+ +K + AAR DIE L +V+L++ VKV++NW ++ LK +G+
Sbjct: 253 GRGGEKIKSIGKAARYDIERMLGTRVFLDLLVKVEKNWTEERRQLKRFGF 302
>gi|313202782|ref|YP_004041439.1| GTP-binding protein era [Paludibacter propionicigenes WB4]
gi|312442098|gb|ADQ78454.1| GTP-binding protein Era [Paludibacter propionicigenes WB4]
Length = 293
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 188/297 (63%), Gaps = 13/297 (4%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G+++SI+T+K QTTRHRILGI +G ++Q++ DTPG
Sbjct: 2 HKSGFVNIVGNPNVGKSTLMNALVGERISIITSKAQTTRHRILGIVNGDDFQIVYSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
+++ + +S M+K RSA +AD ++ + D + E+ ++ +E+ + P+LL+
Sbjct: 62 VLKPNYRLQES-MLKFSRSALSDADVLLYVTDVFDSYEKNEDFVEKV---KLNPAPLLLI 117
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK DLI ++ +E +++ E+ PVSA ++ + I LP P ++ KD
Sbjct: 118 INKIDLIDEEKLVVLVEKWKELLPRAEIYPVSALEKFNIDSLFSRIKDLLPESPPFFDKD 177
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV--EKNS 346
+++ P +FFV EIIREKI M Y E+PY+ +V V ++ I++ V+ E++S
Sbjct: 178 QLTDKPAKFFVTEIIREKILMNYEKEIPYSVEVEVEQFQEDDR---LIRINAVIYAERDS 234
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
QK ILIG GGK+LK + T AR D+E F KKV+LE+ VKV+++WR + L+ +GY
Sbjct: 235 QKGILIGHGGKSLKKVGTEARKDMEVFFDKKVFLELFVKVEKDWRNKDTKLRGFGYS 291
>gi|417788392|ref|ZP_12436075.1| GTP-binding protein Era [Lactobacillus salivarius NIAS840]
gi|334308569|gb|EGL99555.1| GTP-binding protein Era [Lactobacillus salivarius NIAS840]
Length = 300
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 177/293 (60%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D ++ +V+A + R D+ + E + + K PI LV+
Sbjct: 66 -HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYLVI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP D
Sbjct: 123 NKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPADQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQK
Sbjct: 183 ITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK GK LK + AR DIE L KVYLE+ VKV+ NW+ + L+ GY
Sbjct: 243 IIIGKCGKMLKQIGVKARKDIELMLGDKVYLELWVKVQPNWKDRQVDLQALGY 295
>gi|224535782|ref|ZP_03676321.1| hypothetical protein BACCELL_00646 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226010|ref|ZP_17212476.1| GTP-binding protein Era [Bacteroides cellulosilyticus CL02T12C19]
gi|224522602|gb|EEF91707.1| hypothetical protein BACCELL_00646 [Bacteroides cellulosilyticus
DSM 14838]
gi|392630867|gb|EIY24848.1| GTP-binding protein Era [Bacteroides cellulosilyticus CL02T12C19]
Length = 293
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 182/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++ +
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPQY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ + ++P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADVLLYVTDVVETPDKHNEFIEKVA---RMEIPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E ++ E+IP+SA VE + + LP P Y+ KD ++ P
Sbjct: 124 SNQEKLVELVEAWKALLPNAEIIPISATTKFNVEYVMKRVKELLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEQFK-EDAKKIHINAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTIFLETFVKVDKDWRSSDKELRNFGY 290
>gi|298373637|ref|ZP_06983626.1| GTP-binding protein Era [Bacteroidetes oral taxon 274 str. F0058]
gi|298274689|gb|EFI16241.1| GTP-binding protein Era [Bacteroidetes oral taxon 274 str. F0058]
Length = 297
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 182/290 (62%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI +G ++Q++ DTPG++ K
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIITSKAQTTRHRIMGIVNGEDFQIVYSDTPGVL-KPN 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEE--GVGDHKDKLPILLVLNKK 232
+ L M + SA +AD ++ + D E+ + LE+ +G +++NK
Sbjct: 67 YKLQESMREFSDSALKDADILLYVTDVADNCEKNADFLEKVKHIGSKT-----FVMINKI 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DLI + K ++++ E++P+SA+ G+ + I+ LP P Y+ KD +++
Sbjct: 122 DLIDEQRLLKLVDFWHTALPEAEIVPISAQERFGISQLLKRIVELLPESPPYFDKDALTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFFV EIIREKI + Y EVPY+ +V V +K + I I E++SQK I+I
Sbjct: 182 RPERFFVNEIIREKILLCYDKEVPYSVEVAVEEFKEEENIIN-ISAVIYCERDSQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G A+K + +AAR DIE F QKKV+L++ VKV+++WR E L+++GY
Sbjct: 241 GKNGLAIKKIGSAARKDIEAFFQKKVFLQLYVKVEKDWRNRENKLRNFGY 290
>gi|52081076|ref|YP_079867.1| GTP-binding protein Era [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644966|ref|ZP_07999199.1| GTP-binding protein era [Bacillus sp. BT1B_CT2]
gi|404489958|ref|YP_006714064.1| GTPase Era [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52004287|gb|AAU24229.1| GTP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348957|gb|AAU41591.1| GTP-binding protein Era [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392775|gb|EFV73569.1| GTP-binding protein era [Bacillus sp. BT1B_CT2]
Length = 301
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 176/291 (60%), Gaps = 9/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTDTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEE---GVGDHKDKLPILLVLNK 231
H L MMK + D I+ +++A + + DE + E GV K P+ L++NK
Sbjct: 71 HKLGDFMMKVAHNTLKEVDLILFMINAEEGYGKGDEFIIERLKGV-----KTPVFLIVNK 125
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D I P E+ ++ Y E++P+SA G+ ++ + I LP GP +YP D V+
Sbjct: 126 IDRIHPDELLVLIDEYRTRYPFQEIVPISALEGNNIDTLLKQIEDYLPEGPQFYPSDQVT 185
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+HPERF + E+IREK+ R E+P++ V++ S + R ++ IVVE++SQK I+
Sbjct: 186 DHPERFIISELIREKVLHLTREEIPHSIAVSIESIQERENGSVYVSATIVVERDSQKGIV 245
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G LK + AR DIE L V+LE+ VKV+++WR L+ +G+
Sbjct: 246 IGKRGSLLKEIGKRARTDIEALLGSSVFLELWVKVQKDWRNKMSQLRDFGF 296
>gi|357039525|ref|ZP_09101318.1| GTP-binding protein Era-like-protein [Desulfotomaculum gibsoniae
DSM 7213]
gi|355357888|gb|EHG05658.1| GTP-binding protein Era-like-protein [Desulfotomaculum gibsoniae
DSM 7213]
Length = 312
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 176/294 (59%), Gaps = 18/294 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+ NVGKSTL N M+GQKL+I+++KPQTTRH+I + +G +YQ + DTPGI + K
Sbjct: 26 TIVGRTNVGKSTLLNNMLGQKLTIMSDKPQTTRHKIQCVLTGADYQAVFIDTPGIHKPK- 84
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L M+ +A D +++LV+A G GDH K P+LL
Sbjct: 85 HKLGEHMVGTALNALREVDVVLLLVEAAMP----------GPGDHYMLEQLKKVTGPVLL 134
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK DLIKP E+ + ++K + +++PVSA G V+ +R I+ LP GP YYP
Sbjct: 135 AINKIDLIKPDELMPIIAAFQKTGNFADIVPVSALTGENVQHLRQVIINYLPEGPQYYPD 194
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D+V + PERF + E+IREK+ EVP++ V V + R ++ I E+ SQ
Sbjct: 195 DMVVDRPERFIMAELIREKVLHLTSQEVPHSVAVVVDEVEQRSQELVAVRAVIYTERESQ 254
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
K ILIGKGG+ LK + AR ++E L +++LE+ VKVK++WR + ++++G
Sbjct: 255 KGILIGKGGRMLKEVGKQARQELEALLGSRIFLELWVKVKKDWRNRDIDMRNFG 308
>gi|323490066|ref|ZP_08095287.1| GTP-binding protein Era-like protein (Bex protein) [Planococcus
donghaensis MPA1U2]
gi|323396362|gb|EGA89187.1| GTP-binding protein Era-like protein (Bex protein) [Planococcus
donghaensis MPA1U2]
Length = 305
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 179/293 (61%), Gaps = 11/293 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N+++GQK++I+++KPQTTR+++ G+ + + QMI DTPGI E +
Sbjct: 14 SIIGRPNVGKSTFLNRVVGQKIAIMSDKPQTTRNKVQGVVTTNDSQMIFIDTPGINEPR- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVL---VDACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
H L M+K ++ D ++ + VD +R + +G+ +P+ LV+NK
Sbjct: 73 HKLGDFMLKVAKNTFREVDVLLFVASGVDRVGKEDRYVLEMLKGI-----DVPVFLVINK 127
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + P + K +E Y D E IP+SA G+ VE + I +LP GP YYP D ++
Sbjct: 128 IDQVHPDNLPKIIESYRNEFDFAEAIPISALEGNNVETLLAKINERLPEGPQYYPADQIT 187
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKI 349
+HPERF + E+IREK R E+P++ V + KD I+V+ I+VE++SQK
Sbjct: 188 DHPERFIISELIREKALHLTREEIPHSIAVVIEKIAPDSENKDMIRVQATIMVERDSQKG 247
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + T AR DIE+ L KVYLE+ VKV+++WR L+ +G+
Sbjct: 248 IVIGKKGVLLKQIGTRARKDIENLLGSKVYLELWVKVQKDWRNKAMHLRDFGF 300
>gi|375143689|ref|YP_005006130.1| GTP-binding protein Era-like-protein [Niastella koreensis GR20-10]
gi|361057735|gb|AEV96726.1| GTP-binding protein Era-like-protein [Niastella koreensis GR20-10]
Length = 289
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 6/288 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S+ G+PN GKSTL N ++G+KL+IV+ K QTTRHRI GI + PEYQ+I DTPGIIE K
Sbjct: 7 SIFGRPNAGKSTLLNALMGEKLAIVSPKVQTTRHRIKGILTEPEYQIIFSDTPGIIEPKY 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + MMM V+ A + D ++LVD + E ++ I E + K+P ++V+NK D
Sbjct: 67 KLQEKMMMA-VKQALEDTDVALLLVDVNENHEEVNAIFE----SLRLKVPAIIVINKLDE 121
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + + Y + +SA G++++ D I+ LP P ++ D +++ P
Sbjct: 122 ASEAKKKEVFDLYGAKPYCKGLTGISALKKTGLKELIDAIMKFLPENPPFFEGDEMTDLP 181
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFF E+IREKIF Y+ E+PY V V +K + + I +I+V + +QK IL+G
Sbjct: 182 TRFFCAEMIREKIFYLYQEEIPYHTTVIVNEFKEKSSLIK-IAADIIVNRETQKGILLGV 240
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK ++ L T AR DIE FL +KV+LE+ VKV+ WR +E +LK YGY
Sbjct: 241 GGKMIRQLGTEARKDIEQFLGQKVFLELFVKVRPKWRDNEFMLKEYGY 288
>gi|259046831|ref|ZP_05737232.1| GTP-binding protein Era [Granulicatella adiacens ATCC 49175]
gi|259036454|gb|EEW37709.1| GTP-binding protein Era [Granulicatella adiacens ATCC 49175]
Length = 302
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N ++GQK++I+++K QTTR++I G+ + Q++ DTPGI + K
Sbjct: 11 AIVGRPNVGKSTFMNYVLGQKIAIMSDKAQTTRNKIQGVYTKDNAQIVFLDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ SA D ++ +V+ + D+ + E + K PI LVLNK DL
Sbjct: 70 HELGEFMVKSAYSALKEVDAVLFMVNVSEKRGPGDDFIIEKL--KGIKTPIFLVLNKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + +++E Y+ D V P+S G+ V ++ + ++ LP GP YYP D +++HP
Sbjct: 128 VTPEVLLERVESYKDALDFAGVFPISVLQGNNVNELMEALIEALPEGPQYYPADQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F V E+IREKI + E+P++ V V + K + I+VE+ SQK I+IGK
Sbjct: 188 EYFVVSELIREKILQLTQEEIPHSVAVTVDKMQKDEFDKVHVYANIIVERKSQKGIIIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ LK + T AR DI+ L KVYLE+ VKV+++WR+ + L+ YGY
Sbjct: 248 GGRLLKEIGTRARRDIQQLLGNKVYLELWVKVEKDWRKRKSNLQEYGY 295
>gi|157693029|ref|YP_001487491.1| GTP-binding protein Era [Bacillus pumilus SAFR-032]
gi|157681787|gb|ABV62931.1| GTPase [Bacillus pumilus SAFR-032]
Length = 301
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNSSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAKEGYGKGDEFIIERL--KQTSTPVFLVVNKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ ++ Y E++P+SA G+ ++ + + LP GP +YP D V++HP
Sbjct: 129 IHPDELFLLIDEYRTRYPFKEIVPISALEGNNIDTLLQQVEGYLPEGPQFYPADQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K K + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKPDENGKIHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KVYLE+ VKV+++WR L+ +G+
Sbjct: 249 RGSLLKEVGQKARRDIEALLGSKVYLELWVKVQKDWRNKSTHLRDFGF 296
>gi|86134519|ref|ZP_01053101.1| GTP-binding protein Era [Polaribacter sp. MED152]
gi|85821382|gb|EAQ42529.1| GTP-binding protein Era [Polaribacter sp. MED152]
Length = 293
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 178/288 (61%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+KLSI+T K QTTRHRILGI + EYQ+I DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNALVGEKLSIITPKAQTTRHRILGIVNHEEYQIIFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM V+SA +AD ++ +V+ + + + + + K+P++L+LNK D
Sbjct: 68 YELQASMMDFVKSAFEDADVLIYMVEVGETALKNEAFFNKII---HSKIPVILLLNKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
E+ +K+ ++ + V +SA V+ + I+ LP P +YPKD +++
Sbjct: 125 SNKEEVDEKIAYWREKVPNSFVYVISALERFNVDAVFYKIIELLPESPPFYPKDQLTDKN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI Y+ E+PY+ +V S+ I+ I+VE+++QK I+IG
Sbjct: 185 ERFFVNEKIREKILTHYKKEIPYSVEVETESFIEEENIVR-IRSIIMVERDTQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G A+K + AR D+E F QKKV++E+ VKV +NWR D+ LK +GY
Sbjct: 244 KGTAIKRVGAEARKDLERFFQKKVFIELYVKVNKNWRSDKNQLKRFGY 291
>gi|406589115|ref|ZP_11063559.1| GTP-binding protein Era [Enterococcus sp. GMD1E]
gi|410936827|ref|ZP_11368690.1| GTP-binding protein Era [Enterococcus sp. GMD5E]
gi|430825784|ref|ZP_19443984.1| GTPase Era [Enterococcus faecium E0164]
gi|404471361|gb|EKA15899.1| GTP-binding protein Era [Enterococcus sp. GMD1E]
gi|410734857|gb|EKQ76775.1| GTP-binding protein Era [Enterococcus sp. GMD5E]
gi|430445681|gb|ELA55403.1| GTPase Era [Enterococcus faecium E0164]
Length = 299
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 189/296 (63%), Gaps = 7/296 (2%)
Query: 111 PNHKSV----LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS +G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMSFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIIIGKGGKMLKQVGTKARKDIENLLGDKVFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|429747606|ref|ZP_19280862.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429162738|gb|EKY05029.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 380
str. F0488]
Length = 293
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 182/290 (62%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+ +K QTTRHRI GI S ++Q++ DTPGII K
Sbjct: 8 NIIGNPNVGKSTLMNAFVGEKLSIIPSKAQTTRHRIFGIVSSDDFQIVFSDTPGII-KPS 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
+ L + MM V+SA +AD ++ +V+ + E+ +E ++L P+LL++NK
Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFKRINQLDVPVLLLINKV 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + +++ ++++ E+ P+SA E + + I+ LP PA++PKD +++
Sbjct: 122 DTSDQSVLEEQVAYWKEKVPRTEIYPISALRNFQTEVVFNRIIELLPESPAFFPKDQLTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFFV EIIREKI + Y+ E+PY+ +V S+ A I+ I+VE+ SQK I+I
Sbjct: 182 KPERFFVNEIIREKILLHYKKEIPYSVEVETESF-ADSEAIIHIRSVIMVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+ALK + AR D+E F K+++LE+ VKV ++WR + L+ +GY
Sbjct: 241 GHKGEALKRVGIEARADLEKFFGKQIHLELFVKVNKDWRSNVRQLRRFGY 290
>gi|336114410|ref|YP_004569177.1| GTP-binding protein Era [Bacillus coagulans 2-6]
gi|335367840|gb|AEH53791.1| GTP-binding protein Era [Bacillus coagulans 2-6]
Length = 302
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 179/290 (61%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST NQ++GQK++I+++KPQTTR++I G+ + + QMI DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFINQVVGQKIAIMSDKPQTTRNKIQGVYTADDAQMIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K+ D I+ +V+A + R DE + + + + P+ LV+NK DL
Sbjct: 71 HKLGDFMVKSATDTLKEVDLILFMVNAEEKRGRGDEYIIDLL--KHVRTPVFLVINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y+ EV+P+SA G+ V + I LP GP YYP D V++HP
Sbjct: 129 VHPDDLLAFIEQYKDLYPFREVVPISALGGNNVGRLLGAIKEYLPEGPQYYPADQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF + E+IREK R EVP++ V V+ + KD I+V IVVE+ SQK I+I
Sbjct: 189 ERFIISELIREKALQLTREEVPHSIAV-VIEKMEQAENKDVIRVMATIVVERPSQKGIII 247
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ G LK + AR DIE+ L +VYLE+ VKV+++WR L+ +G+
Sbjct: 248 GRQGSMLKEIGKRARADIENLLGSQVYLELWVKVQKDWRNKISQLRDFGF 297
>gi|373501195|ref|ZP_09591560.1| GTP-binding protein Era [Prevotella micans F0438]
gi|371950102|gb|EHO67961.1| GTP-binding protein Era [Prevotella micans F0438]
Length = 293
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 178/288 (61%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTSDTQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + L + + P++L++NK DL
Sbjct: 68 KM-QEMMLQFSESALTDADILLYVTDVVENPEKNADFLAKVSNINT---PVILLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I ++ ++ + + E++P+SA+ G++ + I LP PAY+ K +++ P
Sbjct: 124 INQKQLIALVDKWHRLLPNAEILPISAQNKFGIDTLMKRIEELLPESPAYFDKAQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y E+PY+ +V V +K P + I I VE+NSQK I+IG
Sbjct: 184 AKFFVTEIIREKILRYYDKEIPYSVEVTVEQFKETPQHIN-ISAIIYVERNSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK ++T AR +E F K +YLEI VKV+++WR + L ++GY
Sbjct: 243 KGYALKKVSTEARKSLERFFDKGIYLEIFVKVQKDWRNSQKELANFGY 290
>gi|357637362|ref|ZP_09135237.1| GTP-binding protein Era [Streptococcus macacae NCTC 11558]
gi|357585816|gb|EHJ53019.1| GTP-binding protein Era [Streptococcus macacae NCTC 11558]
Length = 299
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 184/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKVQTTRNKIMGIYTTDQEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ ++ A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMISADEARGKGDDMIMERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|399023667|ref|ZP_10725722.1| GTP-binding protein Era [Chryseobacterium sp. CF314]
gi|398082366|gb|EJL73120.1| GTP-binding protein Era [Chryseobacterium sp. CF314]
Length = 291
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 182/289 (62%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + + Q++ DTPG+++ K
Sbjct: 8 NIVGKPNAGKSTLLNQLMGEKLAIVTQKAQTTRHRIFGIYNEEDLQIVFSDTPGVLDPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+ + +AD + +VD E + ++E+ +K +P+LL+LNK D
Sbjct: 67 YGLQEKMMDFVKDSLQDADVFLFIVDVTDKAEPSEFLIEKL---NKIPVPVLLLLNKVDQ 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ K +E W+ + E++P+SA E I + + LP P YY KD+ ++
Sbjct: 124 TDQAGLEKLVEDWHNRIPKA-EILPISALNAFNTEVILPKLKSMLPENPPYYDKDMYTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV E IREKI + Y E+PY+ +V +K + FI I VE+++QK I+IG
Sbjct: 183 PERFFVNEAIREKILLNYDKEIPYSVEVVTEQFKEK-EGIIFIDSIIYVERDTQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+A+K + T ARLD+E F KK++L + VKVK++WR+++ LK++GY
Sbjct: 242 HKGEAIKKVGTEARLDLEKFFTKKIHLNLFVKVKKDWRKNDRDLKNFGY 290
>gi|410096036|ref|ZP_11291027.1| GTP-binding protein Era [Parabacteroides goldsteinii CL02T12C30]
gi|409227442|gb|EKN20340.1| GTP-binding protein Era [Parabacteroides goldsteinii CL02T12C30]
Length = 296
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 186/294 (63%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + +SM+ + + G +AD ++ + D + ++ +E L+ + P+LL+
Sbjct: 65 VLHPNYKLQESMLNFSESALG-DADVLLYVTDVVETIDKNEEFLQRV---QSVECPVLLL 120
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDTSNQAELEKMVAHWKEVLPKAEIIPISALSNFNIDYVKHRVEDLMPESPPYFEKD 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE++SQK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEEEEMIH-IKALIIVERDSQK 239
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG G+ALK + AR DIE F +KKV+LE+ VKV+++WR + LLK++GY
Sbjct: 240 GIIIGHKGQALKKVGAMARKDIERFFEKKVFLEMFVKVEKDWRNRDNLLKNFGY 293
>gi|452856293|ref|YP_007497976.1| GTP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452080553|emb|CCP22316.1| GTP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 301
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D ++ +++A + + DE + E +G + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ VE + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRTRYPFKEIVPISALEGNNVETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEVPHSIAVAIEFIKGQENGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGALLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|389571827|ref|ZP_10161915.1| GTP-binding protein Era [Bacillus sp. M 2-6]
gi|407978478|ref|ZP_11159309.1| GTPase Era [Bacillus sp. HYC-10]
gi|388428313|gb|EIL86110.1| GTP-binding protein Era [Bacillus sp. M 2-6]
gi|407415036|gb|EKF36652.1| GTPase Era [Bacillus sp. HYC-10]
Length = 301
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MM+ ++ D I+ +++A + + DE + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMRVAQNTLKEVDLILFMINAQEGYGKGDEFIIERL--KQTSTPVFLVVNKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ ++ Y E++P+SA G+ ++ + I LP GP +YP D V++HP
Sbjct: 129 IHPDELFLLIDEYRTRYPFKEIVPISALEGNNIDTLLQQIEGYLPEGPQFYPADQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K K + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKPDENGKIHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KVYLE+ VKV+++WR L+ +G+
Sbjct: 249 RGSLLKEVGQKARRDIEALLGSKVYLELWVKVQKDWRNKSTHLRDFGF 296
>gi|398311471|ref|ZP_10514945.1| GTPase Era [Bacillus mojavensis RO-H-1]
Length = 301
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QNTSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V++ S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVSIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|315607419|ref|ZP_07882415.1| GTP-binding protein Era [Prevotella buccae ATCC 33574]
gi|402306466|ref|ZP_10825511.1| GTP-binding protein Era [Prevotella sp. MSX73]
gi|315250851|gb|EFU30844.1| GTP-binding protein Era [Prevotella buccae ATCC 33574]
gi|400379790|gb|EJP32622.1| GTP-binding protein Era [Prevotella sp. MSX73]
Length = 293
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 179/289 (61%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTEDTQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM+ SA +AD ++ + D + PE+ + L++ K +P+LL++NK D
Sbjct: 68 KM-QEMMLAFSESALADADVLLYVTDVVENPEKNVDFLDKV---KKMSIPVLLLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +E + E++P+SAK GV+ + I LP PAY+ KD +++ P
Sbjct: 124 SDQKKLGDLVEKWHSLLPNAEILPISAKNKFGVDMLMRRIKELLPESPAYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EI+REKI + Y E+PY+ +V+V +K K I V I VE++SQK I+IG
Sbjct: 184 AKFFVSEIVREKILLYYDKEIPYSVEVSVERFK-EDEHKIHINVVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK +++ AR +E F KK++LE VKV ++WR + LKH+GY
Sbjct: 243 QGVALKKVSSEARKALEKFFDKKIFLETFVKVDKDWRSSQKELKHFGYN 291
>gi|16079583|ref|NP_390407.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
168]
gi|221310453|ref|ZP_03592300.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
168]
gi|221314776|ref|ZP_03596581.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319699|ref|ZP_03600993.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323976|ref|ZP_03605270.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321312012|ref|YP_004204299.1| GTPase Era [Bacillus subtilis BSn5]
gi|418032295|ref|ZP_12670778.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428280018|ref|YP_005561753.1| GTP-binding protein Era [Bacillus subtilis subsp. natto BEST195]
gi|449095023|ref|YP_007427514.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452914939|ref|ZP_21963565.1| GTP-binding protein Era [Bacillus subtilis MB73/2]
gi|1168646|sp|P42182.1|ERA_BACSU RecName: Full=GTPase Era; AltName: Full=Bex protein
gi|606745|gb|AAB59994.1| Bex [Bacillus subtilis]
gi|1303826|dbj|BAA12482.1| YqfH [Bacillus subtilis]
gi|2634961|emb|CAB14458.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str. 168]
gi|291484975|dbj|BAI86050.1| GTP-binding protein Era [Bacillus subtilis subsp. natto BEST195]
gi|320018286|gb|ADV93272.1| GTPase Era [Bacillus subtilis BSn5]
gi|351471158|gb|EHA31279.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959775|dbj|BAM53015.1| GTP-binding protein Era [Bacillus subtilis BEST7613]
gi|407965350|dbj|BAM58589.1| GTP-binding protein Era [Bacillus subtilis BEST7003]
gi|449028938|gb|AGE64177.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452115287|gb|EME05683.1| GTP-binding protein Era [Bacillus subtilis MB73/2]
Length = 301
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y K E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRKRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|253682642|ref|ZP_04863439.1| GTP-binding protein Era [Clostridium botulinum D str. 1873]
gi|253562354|gb|EES91806.1| GTP-binding protein Era [Clostridium botulinum D str. 1873]
Length = 294
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+KLSIV+ +PQTTR+ I I + +YQ++ DTPGI K
Sbjct: 8 SIIGRPNVGKSTLINEILGEKLSIVSCRPQTTRNNIRAILTKDDYQLVFLDTPGI-HKPR 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K S+ D IV + + DE++ E + + K P+ L++NK D
Sbjct: 67 HKLGEYMVKAAESSKDEVDLIVFITTPQNEIGKGDELILENIKNSKK--PVFLIVNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P +A+ L+ Y ++ + E+IP+SA+ V+ + D ++ +P GP YYP D++++
Sbjct: 125 NPPELVAETLKKYSEYMEFKEIIPISAQKNKNVDILLDLMIKYMPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EIIREK EVP+ V ++S K I ++ EK+S K I+IGK
Sbjct: 185 ERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQAKNGTYHIDANLLCEKDSHKGIVIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ LK + T AR DI FL KV L++ V+VK+ WR +LK GY
Sbjct: 245 GGQMLKKIGTYARQDISKFLDTKVNLKVWVRVKKEWRDSNFMLKELGY 292
>gi|312110184|ref|YP_003988500.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1]
gi|336234648|ref|YP_004587264.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93]
gi|423719218|ref|ZP_17693400.1| GTP-binding protein era [Geobacillus thermoglucosidans TNO-09.020]
gi|311215285|gb|ADP73889.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1]
gi|335361503|gb|AEH47183.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93]
gi|383368121|gb|EID45396.1| GTP-binding protein era [Geobacillus thermoglucosidans TNO-09.020]
Length = 302
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG+ + K
Sbjct: 12 SIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTPGMHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +++A + R D + E + + P+ LV+NK DL
Sbjct: 71 HKLGDFMMKVALNALKEVDLILFMINAEEGFGRGDAYIIERLKEVNT--PVFLVINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++ Y++ E+IP+SA G+ +E + + I LP GP YYP D V++HP
Sbjct: 129 VHPNDLLPLIDRYKELYPFAEIIPISALQGNNIETLVEQIKKYLPEGPQYYPPDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF + E+IREK R EVP++ V V + + R + ++ I+VE++SQK I+IG
Sbjct: 189 ERFIIAELIREKALHLTREEVPHSIAVVVETIERREDSDTVYVGAVIIVERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR+DIE L +V+LE+ VKV+++WR L+ +G+
Sbjct: 249 KQGRMLKEIGQRARVDIEALLGSRVFLELWVKVQKDWRNRLAQLRDFGF 297
>gi|387132166|ref|YP_006298138.1| GTP-binding protein Era [Prevotella intermedia 17]
gi|386375014|gb|AFJ08840.1| GTP-binding protein Era [Prevotella intermedia 17]
Length = 293
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 178/289 (61%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG++ K
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPGVL-KPN 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + MM++ SA +AD ++ + D + PE+ + LE+ K ++P++L++NK D
Sbjct: 67 YKMQEMMLQFSESALSDADILLYVTDVIEKPEKNTDFLEKVA---KMQIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + + E++P+SAK G + + I LP PAY+ KD +++ P
Sbjct: 124 SDQKTLVTLVEKWHRLLPKAEILPISAKNKFGTDTLMKRIKELLPESPAYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ALK ++T AR +E F KK+YLE VKV ++WR + L ++GY
Sbjct: 243 QGQALKKVSTEARKSLEKFFDKKIYLETFVKVDKDWRNSQKELGNFGYN 291
>gi|260886788|ref|ZP_05898051.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185]
gi|330839400|ref|YP_004413980.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185]
gi|260863387|gb|EEX77887.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185]
gi|329747164|gb|AEC00521.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185]
Length = 297
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IGQK+ I+++KPQTTR RIL I + P+ Q++ DTPGI K
Sbjct: 12 AVVGRPNVGKSTLINSLIGQKIVIMSDKPQTTRTRILCILTEPDAQIVFLDTPGI-HKPR 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M++ S D + +VDA + + + E + K P +LV+NK DL
Sbjct: 71 HTLGEYMVRAAESTLKEVDAVFFVVDATEKMGPGERYILERL--QATKCPCILVVNKLDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+ + LE Y K +P+SAK ++ + + LP GPAYYP+D+V++ P
Sbjct: 129 IEKPVVLPILESYMKAYPFAGAVPISAKEEVNLDSLLAEVKKYLPEGPAYYPEDMVTDQP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER V E++REK + R+E+P+A V++ K RP +I+ I VE+ SQK I+IG
Sbjct: 189 ERLIVAELVREKALLATRDELPHAMAVDLDEMKERPKGGFYIRATIYVERESQKGIVIGA 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G L+ + AR DIE L KV+L++ VKVK++WR EG+L ++G+
Sbjct: 249 KGALLREIGAQARKDIEMLLGAKVFLDLWVKVKKDWRNREGVLHNFGF 296
>gi|430758713|ref|YP_007208930.1| GTP-binding protein Bex [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|430023233|gb|AGA23839.1| GTP-binding protein Bex [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 301
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y K E++P+SA G+ +E + I LP GP +YP D +++HP
Sbjct: 129 IHPDQLLLLIDEYRKRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQFYPSDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|402776792|ref|YP_006630736.1| GTP-binding protein [Bacillus subtilis QB928]
gi|402481972|gb|AFQ58481.1| GTP-binding protein [Bacillus subtilis QB928]
Length = 316
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 27 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 85
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + P+ L++NK D
Sbjct: 86 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTPVFLIVNKIDK 143
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y K E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 144 IHPDQLLLLIDEYRKRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQFYPSDQVTDHP 203
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K + + IVVE++SQK I+IGK
Sbjct: 204 ERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 263
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 264 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 311
>gi|88802178|ref|ZP_01117706.1| putative GTP-binding protein [Polaribacter irgensii 23-P]
gi|88782836|gb|EAR14013.1| putative GTP-binding protein [Polaribacter irgensii 23-P]
Length = 294
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 181/290 (62%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+KLSI+T K QTTRHRILGI + +YQ++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNALVGEKLSIITAKAQTTRHRILGIVNEEDYQIVFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V+SA +AD ++ +V+ + + + + ++P++L+LNK D
Sbjct: 68 YELQSSMMDFVKSAFEDADILIYMVEVGEKELKNEAFFHRIL---HSEIPVILLLNKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
E+ +K+E W +K + D V +SA V + D I LP GPA+YPKD +++
Sbjct: 125 SSQEEVEEKIEYWRDKVPNAD-VFVISALEKFNVPAVFDKIKELLPEGPAFYPKDQLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERFFV E IREKI + Y+ E+PY+ +V + T I+ I+VE+ +QK I+IG
Sbjct: 184 SERFFVNEKIREKILIHYKKEIPYSVEVETEEFTEEETIVR-IRSIIMVERETQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + AR D+E F +KKV++E+ VKV +NWR D+ LK +GY
Sbjct: 243 HKGAALKRVGAEARKDLEKFFEKKVFIELYVKVNKNWRSDKIQLKRFGYN 292
>gi|347542288|ref|YP_004856924.1| GTP-binding protein Era [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985323|dbj|BAK80998.1| GTP-binding protein Era [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 294
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 171/289 (59%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+ NVGKSTL N I QKLSIV++KPQTTR+ ++GI + YQ+I DTPG K
Sbjct: 8 SIIGRANVGKSTLLNNFINQKLSIVSSKPQTTRNNVIGILNDENYQIIFTDTPGY-HKPR 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + M+K++ D I+ + + K R+D + E + D +P + VLNK D
Sbjct: 67 YKLGNYMIKSISDGLKETDIIIFVANIRKEIPRLDLEILEKIKDFN--IPKIFVLNKCDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I +I L Y K D +E IP+SA G V+ + IL LP GP YY D ++ +
Sbjct: 125 INSKDIMDVLSRYSKILDFNEYIPISALNGKNVDKLLGLILKYLPNGPKYYDSDQMAANN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
E+FF+ EI+REKI R+EVP+ V +VS K K + I+ I +K + K+I+IG
Sbjct: 185 EKFFISEIVREKILKLIRDEVPHGVGVEIVSMKYDDEKKKYNIEGNIFCDKETHKVIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK ++T +R D+E FL KVY+ + VKV+ NWR D LK GY
Sbjct: 245 KNGEMLKKISTYSRQDMERFLGSKVYIRMWVKVRNNWRDDNNHLKSLGY 293
>gi|300778405|ref|ZP_07088263.1| GTP-binding protein Era [Chryseobacterium gleum ATCC 35910]
gi|300503915|gb|EFK35055.1| GTP-binding protein Era [Chryseobacterium gleum ATCC 35910]
Length = 291
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 181/289 (62%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + + Q++ DTPG+++ K
Sbjct: 8 NIVGKPNAGKSTLLNQLMGEKLAIVTQKAQTTRHRIFGIYNEDDLQIVFSDTPGVLDPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+ + +AD + +VD E + ++E+ +K +P+LL+LNK D
Sbjct: 67 YGLQEKMMDFVKDSLQDADVFLFIVDVTDKAEPSEFLIEKL---NKIPVPVLLLLNKVDQ 123
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ K + EW+ + E++P+SA E I I + LP P YY KD ++
Sbjct: 124 TDQAGLEKLVEEWHNRIPKA-EILPISALNAFNTEVILPKIKSLLPENPPYYDKDQFTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV E IREKI + Y E+PY+ +V +K + FI I VE+++QK I+IG
Sbjct: 183 PERFFVNETIREKILLNYDKEIPYSVEVVTEQFKEK-EGIIFIDSIIYVERDTQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+A+K + T ARLD+E F KK++L + VKVK++WR+++ LK++GY
Sbjct: 242 HKGEAIKKVGTEARLDLEKFFTKKIHLNLFVKVKKDWRKNDRDLKNFGY 290
>gi|409351175|ref|ZP_11234003.1| GTP-binding protein Era [Lactobacillus equicursoris CIP 110162]
gi|407876934|emb|CCK86061.1| GTP-binding protein Era [Lactobacillus equicursoris CIP 110162]
Length = 301
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 175/297 (58%), Gaps = 14/297 (4%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q + DTPG
Sbjct: 7 HKSGFVALIGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKIFGIYTEDDMQAVFVDTPG 66
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA---PERIDEILEEGVGDHKDKLPI 225
I K LD M K SA + D ++ +VDA KA E + +L+ ++P+
Sbjct: 67 IF-KSHSDLDEYMDKASLSALNDVDLVLFMVDAKKAGKGEEYVAGLLKNV------EVPV 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D + P ++ ++ Y+ D DE +P+SA G+GV+D+ I LP GP YY
Sbjct: 120 FLVINKIDQVHPNDLLPIIDSYQAVGDFDEFLPISASQGNGVDDLLKTIKDYLPEGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
D V++ PE F V E+IRE+I EVP++ V V R K + I VEK+
Sbjct: 180 ASDEVTDRPEYFVVAEMIREQILRLTGQEVPHSTAVWVEQMNERINGKLQVNATIYVEKD 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGG +K + +R +IE L +KV L++ VKV+ NWRQD LK GY
Sbjct: 240 GQKRIIIGKGGAMIKQIGMKSRKEIESLLGEKVNLQLWVKVRHNWRQDPAFLKSIGY 296
>gi|374583187|ref|ZP_09656281.1| GTP-binding protein Era [Desulfosporosinus youngiae DSM 17734]
gi|374419269|gb|EHQ91704.1| GTP-binding protein Era [Desulfosporosinus youngiae DSM 17734]
Length = 311
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 175/293 (59%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PN GKSTL N ++GQK+ I+++KPQTTR+RI I + Q+I DTPGI + K
Sbjct: 23 SVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEERGQIIFLDTPGIHKPK- 81
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDHKDKLPILLVLN 230
H L M+ + + D I+ +VD E I E+L++ K P +L LN
Sbjct: 82 HKLGEFMVGTAKESMREVDVILYMVDLSSDFGPGEEFIIEMLKQ------TKTPCVLALN 135
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K DL+ ++ K++ + K D ++P+SAK G ++ I +LP GP YYP+D V
Sbjct: 136 KVDLLTKEQLMIKIQQFSKLADFKAIVPISAKTGENTNELLKVIFAQLPKGPMYYPEDEV 195
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++ PERF + E++REK+ R+EVP++ V + + + T ++ ++VE+ SQK I
Sbjct: 196 TDQPERFIMAELVREKVLQLTRDEVPHSIAVVIEEVQEKKTLVK-VRALVIVERESQKGI 254
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+IG GG LK + AR DIE L KV+LE+ VKVK++WR L++YGYG
Sbjct: 255 IIGSGGAQLKEIGRLARQDIEALLGSKVFLELWVKVKKDWRNRPDSLRNYGYG 307
>gi|403379079|ref|ZP_10921136.1| GTPase Era [Paenibacillus sp. JC66]
Length = 299
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 169/288 (58%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I++NKPQTTR++I G+ + Q++ DTPGI K
Sbjct: 12 AIIGRPNVGKSTLLNQVIGQKIAIMSNKPQTTRNKIHGVYTTENCQIVFLDTPGI-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L MMK D I+ LVDA + D + E + + K P++LVLNK D
Sbjct: 71 SRLGDYMMKVAEGTLREVDAILFLVDAAEGIGGGDRFIIERL--KQVKTPVILVLNKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ + Y+ E+IP+SA G+ V + D + L GP YYP D +++HP
Sbjct: 129 VHPEELLPVIASYKDLYPFSEIIPISALLGNNVNSLLDTLTGYLEEGPQYYPADQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI R E+P++ V + K I I VE++SQK I+IGK
Sbjct: 189 EQFVCAELIREKILHLTREEIPHSIAVTIEDMKREANDVVHISAVIYVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KV+LE+ VKVK++WR E +LK G+
Sbjct: 249 RGALLKEVGQQARADIEALLGSKVFLELWVKVKKDWRNQERILKDLGF 296
>gi|331269998|ref|YP_004396490.1| GTP-binding protein Era [Clostridium botulinum BKT015925]
gi|329126548|gb|AEB76493.1| GTP-binding protein Era [Clostridium botulinum BKT015925]
Length = 294
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 171/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+KLSIV+ +PQTTR+ I I + +YQ++ DTPGI K
Sbjct: 8 SIIGRPNVGKSTLINEILGEKLSIVSCRPQTTRNNIRAILTKEDYQLVFLDTPGI-HKPR 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K S+ D IV + + DE++ E + + P+ L++NK D
Sbjct: 67 HKLGEYMVKAAESSKDEVDLIVFITTPQSEIGKGDELILENIKNSNK--PVFLIVNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P +A+ L+ Y ++ + E+IP+SA+ V+ + D ++ +P GP YYP D++++
Sbjct: 125 NPPELVAETLKKYSEYMEFKEIIPISAQKNKNVDTLLDLMIKYMPEGPKYYPDDMITDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EIIREK EVP+ V ++S K I ++ EK+S K I+IGK
Sbjct: 185 ERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQAKNGTYHIDANLLCEKDSHKGIVIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ LK + T AR DI FL KV L++ V+VK+ WR +LK GY
Sbjct: 245 GGQMLKRIGTYARQDISKFLDAKVNLKVWVRVKKEWRDSNFMLKELGY 292
>gi|313884139|ref|ZP_07817905.1| ribosome biogenesis GTPase Era [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620586|gb|EFR32009.1| ribosome biogenesis GTPase Era [Eremococcus coleocola
ACS-139-V-Col8]
Length = 301
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++K QTTR+RI G+ + + Q++ DTPGI + K
Sbjct: 12 ALIGRPNVGKSTLLNKVVGQKIAIMSDKAQTTRNRIQGVYTDADSQVVFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L + M+K SA AD + V+V+A + D ++ E + + +P+ L++NK DL
Sbjct: 71 HALGNFMLKTAYSALQGADAVCVVVNAAEKIGPGDRLVIERAKNVQ--VPLFLLINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + +E Y+ D +V P+SA G+ V ++ + + LP GP YYP D V +HP
Sbjct: 129 VSPEQVLQAIESYKDLADFAQVFPISALEGNNVPELVEGLKEVLPQGPQYYPADQVMDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F V E IREK+ + R EVP++ V V S K I I+VE+ SQK I+IGK
Sbjct: 189 EYFVVAEFIREKVLILTREEVPHSVAVKVESMVRNEDDKIEIHAVIIVERASQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ +K + AR DIE L KVYL++ V+V+++WR L+ GY
Sbjct: 249 QGQMIKKIGKMARRDIEKLLADKVYLDLFVQVQKSWRDRMTNLQDLGY 296
>gi|296333313|ref|ZP_06875766.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675182|ref|YP_003866854.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii str.
W23]
gi|443631824|ref|ZP_21116004.1| GTP-binding protein Era [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|296149511|gb|EFG90407.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413426|gb|ADM38545.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii str.
W23]
gi|443347939|gb|ELS61996.1| GTP-binding protein Era [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 301
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + K P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QKMSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|444376450|ref|ZP_21175694.1| GTP-binding protein Era [Enterovibrio sp. AK16]
gi|443679428|gb|ELT86084.1| GTP-binding protein Era [Enterovibrio sp. AK16]
Length = 304
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 179/295 (60%), Gaps = 5/295 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ + DTPG+
Sbjct: 9 HCGFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVYVDTPGL 68
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
++ ++ +M + S+ + + ++ LVD + + + +L + K +LP +L++
Sbjct: 69 HIEEKRTINRLMNRAASSSLTDVELVLFLVDGTQWTQDDEMVLNKL---KKAELPTVLLI 125
Query: 230 NKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D +K GE+ L+ + D +V+PVSAK+G ++ + + LP G Y+P++
Sbjct: 126 NKVDNVKEKGELFPHLQEVSEKMDFIDVVPVSAKHGTNIDVVEKLVRNHLPEGEWYFPEE 185
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 347
V++ +RF EIIREK+ +E+PY+ V + + P F I I+VE+N Q
Sbjct: 186 YVTDRSQRFMASEIIREKLMRFTGDELPYSVTVEIERFDYNPDTDGFEINGLILVERNGQ 245
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ++IGKGG +K + ARLD+ED ++KVYLE+ VKVK W DE L+ GY
Sbjct: 246 KRMVIGKGGDKIKTIGREARLDMEDLFERKVYLELWVKVKSGWADDERALRSLGY 300
>gi|423346895|ref|ZP_17324582.1| GTP-binding protein Era [Parabacteroides merdae CL03T12C32]
gi|409218556|gb|EKN11524.1| GTP-binding protein Era [Parabacteroides merdae CL03T12C32]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIIGIVNTADMQIVYSDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + +SM+ + + G +AD ++ + D + ++ +E L++ K + P+LL+
Sbjct: 65 VLHPNYKLQESMLNFSQSALG-DADVLLYVTDVVEKIDKNEEFLQKV---QKVECPVLLL 120
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDTTTQPELEKLVAEWKELLPKAEIIPISALSNFNIDYVKRRVEDLMPESPPYFEKD 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE++SQK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEEAELIH-IKALIIVERDSQK 239
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG G+ALK + AR DIE F KKV+LE+ VKV+++WR + +LK++GY
Sbjct: 240 GIIIGHRGQALKKVGAMARKDIERFFDKKVFLEMFVKVEKDWRNRDNMLKNFGY 293
>gi|374373831|ref|ZP_09631491.1| GTP-binding protein Era-like-protein [Niabella soli DSM 19437]
gi|373234804|gb|EHP54597.1| GTP-binding protein Era-like-protein [Niabella soli DSM 19437]
Length = 290
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 180/289 (62%), Gaps = 6/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++ GKPN GKSTL N ++G+KL+IV++K QTTRHRI I + +YQ+I DTPGIIE +
Sbjct: 7 NIFGKPNAGKSTLLNALMGEKLAIVSSKVQTTRHRIKAILTEKDYQIIFSDTPGIIEPR- 65
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM++V+SA +AD ++L+D E D++ K ++P +LVLNK D
Sbjct: 66 YKLHEKMMQSVKSALEDADVALLLMDVNDNWEENDQLF----SGLKLRVPGVLVLNKIDK 121
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P +I + + ++ +++ +SA G D I+ LP G +Y D +S+ P
Sbjct: 122 APPTKIEEAIAYFTNKPYAKKIVAISAIAGVNYTDFLKPIVALLPEGAPFYDTDEISDLP 181
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV E+IREKI+ ++E+PY V + +K + T I +I+V + +QK+ILIG+
Sbjct: 182 TKFFVSELIREKIYELAQDEIPYHTAVLIREFKEKQTLVKII-ADIIVHRETQKMILIGE 240
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G +K + TAAR DIE FL++KV+LE+ +KVK WR ++ LK YGYG
Sbjct: 241 KGSMVKKIGTAARKDIEAFLEQKVFLELFIKVKPKWRDNDLYLKEYGYG 289
>gi|69247285|ref|ZP_00604286.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecium DO]
gi|227551968|ref|ZP_03982017.1| GTP-binding protein Era [Enterococcus faecium TX1330]
gi|257882780|ref|ZP_05662433.1| GTP-binding protein Era [Enterococcus faecium 1,231,502]
gi|257884088|ref|ZP_05663741.1| GTP-binding protein Era [Enterococcus faecium 1,231,501]
gi|257886866|ref|ZP_05666519.1| GTP-binding protein Era [Enterococcus faecium 1,141,733]
gi|257890445|ref|ZP_05670098.1| GTP-binding protein Era [Enterococcus faecium 1,231,410]
gi|257893051|ref|ZP_05672704.1| GTP-binding protein Era [Enterococcus faecium 1,231,408]
gi|257895440|ref|ZP_05675093.1| GTP-binding protein Era [Enterococcus faecium Com12]
gi|257898046|ref|ZP_05677699.1| GTP-binding protein Era [Enterococcus faecium Com15]
gi|260559560|ref|ZP_05831740.1| GTP-binding protein Era [Enterococcus faecium C68]
gi|261208624|ref|ZP_05923061.1| GTP-binding protein Era [Enterococcus faecium TC 6]
gi|289566737|ref|ZP_06447151.1| GTP-binding protein Era [Enterococcus faecium D344SRF]
gi|293378307|ref|ZP_06624476.1| GTP-binding protein Era [Enterococcus faecium PC4.1]
gi|293559428|ref|ZP_06675967.1| GTP-binding protein Era [Enterococcus faecium E1162]
gi|293568654|ref|ZP_06679969.1| GTP-binding protein Era [Enterococcus faecium E1071]
gi|294616318|ref|ZP_06696111.1| GTP-binding protein Era [Enterococcus faecium E1636]
gi|294622998|ref|ZP_06701887.1| GTP-binding protein Era [Enterococcus faecium U0317]
gi|314939540|ref|ZP_07846768.1| GTP-binding protein Era [Enterococcus faecium TX0133a04]
gi|314942705|ref|ZP_07849531.1| GTP-binding protein Era [Enterococcus faecium TX0133C]
gi|314948957|ref|ZP_07852323.1| GTP-binding protein Era [Enterococcus faecium TX0082]
gi|314953304|ref|ZP_07856232.1| GTP-binding protein Era [Enterococcus faecium TX0133A]
gi|314993384|ref|ZP_07858749.1| GTP-binding protein Era [Enterococcus faecium TX0133B]
gi|314995734|ref|ZP_07860823.1| GTP-binding protein Era [Enterococcus faecium TX0133a01]
gi|383329309|ref|YP_005355193.1| GTP-binding protein Era [Enterococcus faecium Aus0004]
gi|389869158|ref|YP_006376581.1| GTP-binding protein Era [Enterococcus faecium DO]
gi|415892201|ref|ZP_11549882.1| GTP-binding protein Era [Enterococcus faecium E4453]
gi|416135787|ref|ZP_11598549.1| GTP-binding protein Era [Enterococcus faecium E4452]
gi|424766310|ref|ZP_18193663.1| ribosome biogenesis GTPase Era [Enterococcus faecium TX1337RF]
gi|424785517|ref|ZP_18212319.1| ribosome biogenesis GTPase Era [Enterococcus faecium V689]
gi|424794056|ref|ZP_18220082.1| ribosome biogenesis GTPase Era [Enterococcus faecium S447]
gi|424849296|ref|ZP_18273753.1| ribosome biogenesis GTPase Era [Enterococcus faecium R501]
gi|424855975|ref|ZP_18280261.1| ribosome biogenesis GTPase Era [Enterococcus faecium R499]
gi|424866925|ref|ZP_18290743.1| ribosome biogenesis GTPase Era [Enterococcus faecium R497]
gi|424938519|ref|ZP_18354308.1| ribosome biogenesis GTPase Era [Enterococcus faecium R496]
gi|424952872|ref|ZP_18367871.1| ribosome biogenesis GTPase Era [Enterococcus faecium R494]
gi|424955795|ref|ZP_18370609.1| ribosome biogenesis GTPase Era [Enterococcus faecium R446]
gi|424960124|ref|ZP_18374669.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1986]
gi|424966942|ref|ZP_18380686.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1140]
gi|424971266|ref|ZP_18384709.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1139]
gi|424978493|ref|ZP_18391406.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1123]
gi|424985647|ref|ZP_18398110.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV69]
gi|424989357|ref|ZP_18401624.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV38]
gi|424990579|ref|ZP_18402787.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV26]
gi|424993316|ref|ZP_18405315.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV168]
gi|424997881|ref|ZP_18409609.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV165]
gi|425001177|ref|ZP_18412701.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV161]
gi|425003925|ref|ZP_18415259.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV102]
gi|425006440|ref|ZP_18417616.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV1]
gi|425010261|ref|ZP_18421225.1| ribosome biogenesis GTPase Era [Enterococcus faecium E422]
gi|425013179|ref|ZP_18423920.1| ribosome biogenesis GTPase Era [Enterococcus faecium E417]
gi|425016799|ref|ZP_18427343.1| ribosome biogenesis GTPase Era [Enterococcus faecium C621]
gi|425032828|ref|ZP_18437839.1| ribosome biogenesis GTPase Era [Enterococcus faecium 515]
gi|425035339|ref|ZP_18440182.1| ribosome biogenesis GTPase Era [Enterococcus faecium 514]
gi|425037416|ref|ZP_18442085.1| ribosome biogenesis GTPase Era [Enterococcus faecium 513]
gi|425041604|ref|ZP_18445997.1| ribosome biogenesis GTPase Era [Enterococcus faecium 511]
gi|425048968|ref|ZP_18452848.1| ribosome biogenesis GTPase Era [Enterococcus faecium 509]
gi|425055532|ref|ZP_18459005.1| ribosome biogenesis GTPase Era [Enterococcus faecium 505]
gi|425059033|ref|ZP_18462385.1| ribosome biogenesis GTPase Era [Enterococcus faecium 504]
gi|425060733|ref|ZP_18464014.1| ribosome biogenesis GTPase Era [Enterococcus faecium 503]
gi|427396462|ref|ZP_18889221.1| GTPase Era [Enterococcus durans FB129-CNAB-4]
gi|430819615|ref|ZP_19438266.1| GTPase Era [Enterococcus faecium E0045]
gi|430822815|ref|ZP_19441390.1| GTPase Era [Enterococcus faecium E0120]
gi|430831011|ref|ZP_19449064.1| GTPase Era [Enterococcus faecium E0333]
gi|430834200|ref|ZP_19452207.1| GTPase Era [Enterococcus faecium E0679]
gi|430835537|ref|ZP_19453527.1| GTPase Era [Enterococcus faecium E0680]
gi|430838396|ref|ZP_19456342.1| GTPase Era [Enterococcus faecium E0688]
gi|430841736|ref|ZP_19459654.1| GTPase Era [Enterococcus faecium E1007]
gi|430843749|ref|ZP_19461648.1| GTPase Era [Enterococcus faecium E1050]
gi|430847776|ref|ZP_19465610.1| GTPase Era [Enterococcus faecium E1133]
gi|430849313|ref|ZP_19467094.1| GTPase Era [Enterococcus faecium E1185]
gi|430851962|ref|ZP_19469697.1| GTPase Era [Enterococcus faecium E1258]
gi|430855187|ref|ZP_19472896.1| GTPase Era [Enterococcus faecium E1392]
gi|430857849|ref|ZP_19475482.1| GTPase Era [Enterococcus faecium E1552]
gi|430860504|ref|ZP_19478103.1| GTPase Era [Enterococcus faecium E1573]
gi|430865494|ref|ZP_19481129.1| GTPase Era [Enterococcus faecium E1574]
gi|430947010|ref|ZP_19485790.1| GTPase Era [Enterococcus faecium E1576]
gi|431003731|ref|ZP_19488829.1| GTPase Era [Enterococcus faecium E1578]
gi|431033298|ref|ZP_19491144.1| GTPase Era [Enterococcus faecium E1590]
gi|431077595|ref|ZP_19495060.1| GTPase Era [Enterococcus faecium E1604]
gi|431112165|ref|ZP_19497541.1| GTPase Era [Enterococcus faecium E1613]
gi|431149444|ref|ZP_19499302.1| GTPase Era [Enterococcus faecium E1620]
gi|431230120|ref|ZP_19502323.1| GTPase Era [Enterococcus faecium E1622]
gi|431252043|ref|ZP_19504101.1| GTPase Era [Enterococcus faecium E1623]
gi|431374483|ref|ZP_19510171.1| GTPase Era [Enterococcus faecium E1627]
gi|431414402|ref|ZP_19512221.1| GTPase Era [Enterococcus faecium E1630]
gi|431513954|ref|ZP_19516002.1| GTPase Era [Enterococcus faecium E1634]
gi|431586307|ref|ZP_19520822.1| GTPase Era [Enterococcus faecium E1861]
gi|431635673|ref|ZP_19523158.1| GTPase Era [Enterococcus faecium E1904]
gi|431741018|ref|ZP_19529926.1| GTPase Era [Enterococcus faecium E2039]
gi|431742830|ref|ZP_19531714.1| GTPase Era [Enterococcus faecium E2071]
gi|431746514|ref|ZP_19535339.1| GTPase Era [Enterococcus faecium E2134]
gi|431750204|ref|ZP_19538929.1| GTPase Era [Enterococcus faecium E2297]
gi|431752278|ref|ZP_19540961.1| GTPase Era [Enterococcus faecium E2620]
gi|431757117|ref|ZP_19545748.1| GTPase Era [Enterococcus faecium E3083]
gi|431759614|ref|ZP_19548225.1| GTPase Era [Enterococcus faecium E3346]
gi|431762381|ref|ZP_19550943.1| GTPase Era [Enterococcus faecium E3548]
gi|431764432|ref|ZP_19552972.1| GTPase Era [Enterococcus faecium E4215]
gi|431767506|ref|ZP_19555953.1| GTPase Era [Enterococcus faecium E1321]
gi|431771118|ref|ZP_19559504.1| GTPase Era [Enterococcus faecium E1644]
gi|431772560|ref|ZP_19560898.1| GTPase Era [Enterococcus faecium E2369]
gi|431775465|ref|ZP_19563738.1| GTPase Era [Enterococcus faecium E2560]
gi|431780088|ref|ZP_19568273.1| GTPase Era [Enterococcus faecium E4389]
gi|431781617|ref|ZP_19569761.1| GTPase Era [Enterococcus faecium E6012]
gi|431786007|ref|ZP_19574025.1| GTPase Era [Enterococcus faecium E6045]
gi|447912301|ref|YP_007393713.1| GTP-binding protein Era [Enterococcus faecium NRRL B-2354]
gi|68194907|gb|EAN09377.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecium DO]
gi|227178873|gb|EEI59845.1| GTP-binding protein Era [Enterococcus faecium TX1330]
gi|257818438|gb|EEV45766.1| GTP-binding protein Era [Enterococcus faecium 1,231,502]
gi|257819926|gb|EEV47074.1| GTP-binding protein Era [Enterococcus faecium 1,231,501]
gi|257822920|gb|EEV49852.1| GTP-binding protein Era [Enterococcus faecium 1,141,733]
gi|257826805|gb|EEV53431.1| GTP-binding protein Era [Enterococcus faecium 1,231,410]
gi|257829430|gb|EEV56037.1| GTP-binding protein Era [Enterococcus faecium 1,231,408]
gi|257832005|gb|EEV58426.1| GTP-binding protein Era [Enterococcus faecium Com12]
gi|257835958|gb|EEV61032.1| GTP-binding protein Era [Enterococcus faecium Com15]
gi|260074228|gb|EEW62550.1| GTP-binding protein Era [Enterococcus faecium C68]
gi|260077126|gb|EEW64846.1| GTP-binding protein Era [Enterococcus faecium TC 6]
gi|289161458|gb|EFD09344.1| GTP-binding protein Era [Enterococcus faecium D344SRF]
gi|291588614|gb|EFF20447.1| GTP-binding protein Era [Enterococcus faecium E1071]
gi|291590832|gb|EFF22548.1| GTP-binding protein Era [Enterococcus faecium E1636]
gi|291597554|gb|EFF28716.1| GTP-binding protein Era [Enterococcus faecium U0317]
gi|291606642|gb|EFF36037.1| GTP-binding protein Era [Enterococcus faecium E1162]
gi|292643171|gb|EFF61312.1| GTP-binding protein Era [Enterococcus faecium PC4.1]
gi|313590006|gb|EFR68851.1| GTP-binding protein Era [Enterococcus faecium TX0133a01]
gi|313592049|gb|EFR70894.1| GTP-binding protein Era [Enterococcus faecium TX0133B]
gi|313594647|gb|EFR73492.1| GTP-binding protein Era [Enterococcus faecium TX0133A]
gi|313598570|gb|EFR77415.1| GTP-binding protein Era [Enterococcus faecium TX0133C]
gi|313641176|gb|EFS05756.1| GTP-binding protein Era [Enterococcus faecium TX0133a04]
gi|313644616|gb|EFS09196.1| GTP-binding protein Era [Enterococcus faecium TX0082]
gi|364092101|gb|EHM34505.1| GTP-binding protein Era [Enterococcus faecium E4452]
gi|364093475|gb|EHM35744.1| GTP-binding protein Era [Enterococcus faecium E4453]
gi|378939003|gb|AFC64075.1| GTP-binding protein Era [Enterococcus faecium Aus0004]
gi|388534407|gb|AFK59599.1| GTP-binding protein Era [Enterococcus faecium DO]
gi|402411049|gb|EJV43429.1| ribosome biogenesis GTPase Era [Enterococcus faecium TX1337RF]
gi|402917163|gb|EJX37971.1| ribosome biogenesis GTPase Era [Enterococcus faecium R501]
gi|402923514|gb|EJX43800.1| ribosome biogenesis GTPase Era [Enterococcus faecium V689]
gi|402927065|gb|EJX47054.1| ribosome biogenesis GTPase Era [Enterococcus faecium S447]
gi|402930910|gb|EJX50522.1| ribosome biogenesis GTPase Era [Enterococcus faecium R499]
gi|402936909|gb|EJX56055.1| ribosome biogenesis GTPase Era [Enterococcus faecium R496]
gi|402938397|gb|EJX57411.1| ribosome biogenesis GTPase Era [Enterococcus faecium R497]
gi|402940379|gb|EJX59210.1| ribosome biogenesis GTPase Era [Enterococcus faecium R494]
gi|402947741|gb|EJX65932.1| ribosome biogenesis GTPase Era [Enterococcus faecium R446]
gi|402948802|gb|EJX66907.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1986]
gi|402955412|gb|EJX72944.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1140]
gi|402959500|gb|EJX76754.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1139]
gi|402961351|gb|EJX78387.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1123]
gi|402965460|gb|EJX82178.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV69]
gi|402968850|gb|EJX85304.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV38]
gi|402979352|gb|EJX95027.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV26]
gi|402982952|gb|EJX98384.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV168]
gi|402984884|gb|EJY00148.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV165]
gi|402987205|gb|EJY02289.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV161]
gi|402990842|gb|EJY05694.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV102]
gi|402997303|gb|EJY11637.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV1]
gi|403000650|gb|EJY14755.1| ribosome biogenesis GTPase Era [Enterococcus faecium E422]
gi|403001674|gb|EJY15710.1| ribosome biogenesis GTPase Era [Enterococcus faecium E417]
gi|403006126|gb|EJY19795.1| ribosome biogenesis GTPase Era [Enterococcus faecium C621]
gi|403011822|gb|EJY25105.1| ribosome biogenesis GTPase Era [Enterococcus faecium 515]
gi|403018411|gb|EJY31099.1| ribosome biogenesis GTPase Era [Enterococcus faecium 514]
gi|403022106|gb|EJY34510.1| ribosome biogenesis GTPase Era [Enterococcus faecium 513]
gi|403025730|gb|EJY37781.1| ribosome biogenesis GTPase Era [Enterococcus faecium 511]
gi|403029508|gb|EJY41260.1| ribosome biogenesis GTPase Era [Enterococcus faecium 509]
gi|403033772|gb|EJY45259.1| ribosome biogenesis GTPase Era [Enterococcus faecium 505]
gi|403036752|gb|EJY48093.1| ribosome biogenesis GTPase Era [Enterococcus faecium 504]
gi|403042317|gb|EJY53278.1| ribosome biogenesis GTPase Era [Enterococcus faecium 503]
gi|425723132|gb|EKU86023.1| GTPase Era [Enterococcus durans FB129-CNAB-4]
gi|430440525|gb|ELA50775.1| GTPase Era [Enterococcus faecium E0045]
gi|430442744|gb|ELA52765.1| GTPase Era [Enterococcus faecium E0120]
gi|430481882|gb|ELA59023.1| GTPase Era [Enterococcus faecium E0333]
gi|430485431|gb|ELA62337.1| GTPase Era [Enterococcus faecium E0679]
gi|430489528|gb|ELA66142.1| GTPase Era [Enterococcus faecium E0680]
gi|430491638|gb|ELA68090.1| GTPase Era [Enterococcus faecium E0688]
gi|430493794|gb|ELA70078.1| GTPase Era [Enterococcus faecium E1007]
gi|430497608|gb|ELA73645.1| GTPase Era [Enterococcus faecium E1050]
gi|430536450|gb|ELA76818.1| GTPase Era [Enterococcus faecium E1133]
gi|430538159|gb|ELA78458.1| GTPase Era [Enterococcus faecium E1185]
gi|430542544|gb|ELA82652.1| GTPase Era [Enterococcus faecium E1258]
gi|430547059|gb|ELA87001.1| GTPase Era [Enterococcus faecium E1552]
gi|430547193|gb|ELA87129.1| GTPase Era [Enterococcus faecium E1392]
gi|430551902|gb|ELA91652.1| GTPase Era [Enterococcus faecium E1573]
gi|430552841|gb|ELA92558.1| GTPase Era [Enterococcus faecium E1574]
gi|430558407|gb|ELA97826.1| GTPase Era [Enterococcus faecium E1576]
gi|430561820|gb|ELB01074.1| GTPase Era [Enterococcus faecium E1578]
gi|430564399|gb|ELB03583.1| GTPase Era [Enterococcus faecium E1590]
gi|430566010|gb|ELB05131.1| GTPase Era [Enterococcus faecium E1604]
gi|430569119|gb|ELB08136.1| GTPase Era [Enterococcus faecium E1613]
gi|430574106|gb|ELB12884.1| GTPase Era [Enterococcus faecium E1622]
gi|430575333|gb|ELB14049.1| GTPase Era [Enterococcus faecium E1620]
gi|430578469|gb|ELB17021.1| GTPase Era [Enterococcus faecium E1623]
gi|430583107|gb|ELB21496.1| GTPase Era [Enterococcus faecium E1627]
gi|430586210|gb|ELB24471.1| GTPase Era [Enterococcus faecium E1634]
gi|430589135|gb|ELB27280.1| GTPase Era [Enterococcus faecium E1630]
gi|430593485|gb|ELB31471.1| GTPase Era [Enterococcus faecium E1861]
gi|430602342|gb|ELB39915.1| GTPase Era [Enterococcus faecium E2039]
gi|430602477|gb|ELB40042.1| GTPase Era [Enterococcus faecium E1904]
gi|430607799|gb|ELB45100.1| GTPase Era [Enterococcus faecium E2071]
gi|430608416|gb|ELB45662.1| GTPase Era [Enterococcus faecium E2134]
gi|430610133|gb|ELB47287.1| GTPase Era [Enterococcus faecium E2297]
gi|430613769|gb|ELB50768.1| GTPase Era [Enterococcus faecium E2620]
gi|430619406|gb|ELB56233.1| GTPase Era [Enterococcus faecium E3083]
gi|430625073|gb|ELB61723.1| GTPase Era [Enterococcus faecium E3548]
gi|430625795|gb|ELB62398.1| GTPase Era [Enterococcus faecium E3346]
gi|430630459|gb|ELB66814.1| GTPase Era [Enterococcus faecium E1321]
gi|430631007|gb|ELB67343.1| GTPase Era [Enterococcus faecium E4215]
gi|430633643|gb|ELB69797.1| GTPase Era [Enterococcus faecium E1644]
gi|430637639|gb|ELB73638.1| GTPase Era [Enterococcus faecium E2369]
gi|430640567|gb|ELB76401.1| GTPase Era [Enterococcus faecium E4389]
gi|430643181|gb|ELB78937.1| GTPase Era [Enterococcus faecium E2560]
gi|430646343|gb|ELB81829.1| GTPase Era [Enterococcus faecium E6045]
gi|430648835|gb|ELB84224.1| GTPase Era [Enterococcus faecium E6012]
gi|445188010|gb|AGE29652.1| GTP-binding protein Era [Enterococcus faecium NRRL B-2354]
Length = 299
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 189/296 (63%), Gaps = 7/296 (2%)
Query: 111 PNHKSV----LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS +G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIIIGKGGKMLKQVGTKARKDIENLLGDKVFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|198274288|ref|ZP_03206820.1| hypothetical protein BACPLE_00430 [Bacteroides plebeius DSM 17135]
gi|198272778|gb|EDY97047.1| ribosome biogenesis GTPase Era [Bacteroides plebeius DSM 17135]
Length = 293
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 182/289 (62%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTEDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA ++AD ++ + D + P++ E +E+ K+P+LL++NK DL
Sbjct: 68 KLQESMLNFS-ESALVDADVLLYVTDTVEKPDKNAEFMEKV---RNLKVPVLLLINKIDL 123
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ K + EW+E + E+IP+SA V+ + I LP P Y+ KD ++
Sbjct: 124 TNQEDLVKLVDEWHEMLPEA-EIIPISAMAKFNVDVVMKRIKELLPDSPPYFGKDQWTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
P RFFV EIIREKI + Y E+PY+ +V V +K + I I VE++SQK I+IG
Sbjct: 183 PARFFVTEIIREKILLYYDKEIPYSVEVVVEQFKEDEKSIH-INAVIYVERDSQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ GKALK +AT AR +E F +K +YLE VKV ++WR + LK++GY
Sbjct: 242 RQGKALKKVATEARKTLEHFFRKSIYLETFVKVDKDWRSSDKELKNFGY 290
>gi|194017708|ref|ZP_03056318.1| GTP-binding protein Era [Bacillus pumilus ATCC 7061]
gi|194010608|gb|EDW20180.1| GTP-binding protein Era [Bacillus pumilus ATCC 7061]
Length = 301
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK + D I+ +++A + + DE + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVATNTLKEVDLILFMINAKEGYGKGDEFIIERL--KQTSTPVFLVVNKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P E+ ++ Y E++P+SA G+ ++ + + LP GP +YP D V++HP
Sbjct: 129 IHPDELFLLIDEYRTRYPFKEIVPISALEGNNIDTLLQQVEGYLPEGPQFYPADQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K K + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKPDENGKIHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KVYLE+ VKV+++WR L+ +G+
Sbjct: 249 RGSLLKEVGQKARRDIEALLGSKVYLELWVKVQKDWRNKSTHLRDFGF 296
>gi|433462826|ref|ZP_20420397.1| GTP-binding protein Era [Halobacillus sp. BAB-2008]
gi|432188282|gb|ELK45486.1| GTP-binding protein Era [Halobacillus sp. BAB-2008]
Length = 301
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 181/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IG+K++I+++KPQTTR++I G+ + E QMI DTPGI + K
Sbjct: 11 TIVGRPNVGKSTFMNRVIGEKIAIMSDKPQTTRNKIQGVYTDKEAQMIFIDTPGIHKPKH 70
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+ D M+ NV +N D ++ +++A + R D+ + + + + P+ L++NK D
Sbjct: 71 RLGDYMV--NVAENTLNEVDAVLFMINAEEGYGRGDQFIIDRL--QRVDQPVFLIINKID 126
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P E+ +E Y+ D +E+IP+SA G+ V + + LP GP +YP+D +++H
Sbjct: 127 KVHPDELLPLIEQYKGMFDFEEIIPISALEGNNVNHLVSVLKNHLPEGPQFYPEDQITDH 186
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILI 352
PERF + E IREK+ R EVP++ V + + R + +IQ I+VE+ SQK I+I
Sbjct: 187 PERFVISEFIREKVLHLTREEVPHSIAVVIEGIEKRKNSNAVYIQAAIIVERKSQKGIII 246
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + AR DIE L KV+LE+ VKV+++WR + L +GY
Sbjct: 247 GKQGSMLKEVGKRARKDIEALLGSKVFLELWVKVQKDWRNKQIQLSDFGY 296
>gi|384176153|ref|YP_005557538.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595377|gb|AEP91564.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 301
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y + E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRRRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|303236850|ref|ZP_07323429.1| GTP-binding protein Era [Prevotella disiens FB035-09AN]
gi|302483018|gb|EFL46034.1| GTP-binding protein Era [Prevotella disiens FB035-09AN]
Length = 293
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 176/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG++ K
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPGVL-KPN 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + MM+ SA +AD ++ + D + PE+ E LE+ K +P++L++NK D
Sbjct: 67 YKMQEMMLHFSESALADADILLYVTDVIEKPEKNSEFLEKVA---KMDIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + +E + E++P+SAK G + + I LP PAY+ KD +++ P
Sbjct: 124 SDQKTVVELVEKWHTLLPKAEILPLSAKNKFGTDALMHRIQELLPESPAYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK I+IG
Sbjct: 184 AKFFVTEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAIIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ALK ++T AR +E F KK+YLE VKV ++WR + L ++GY
Sbjct: 243 QGQALKKVSTEARKSLEKFFDKKIYLETFVKVDKDWRNSQKELSNFGYN 291
>gi|430827881|ref|ZP_19446011.1| GTPase Era [Enterococcus faecium E0269]
gi|431301340|ref|ZP_19507659.1| GTPase Era [Enterococcus faecium E1626]
gi|430483962|gb|ELA60997.1| GTPase Era [Enterococcus faecium E0269]
gi|430580530|gb|ELB18997.1| GTPase Era [Enterococcus faecium E1626]
Length = 299
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 189/296 (63%), Gaps = 7/296 (2%)
Query: 111 PNHKSV----LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS +G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIIIGKGGKMLKQVGTKARKDIENLLGDKVFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|427385444|ref|ZP_18881751.1| GTP-binding protein Era [Bacteroides oleiciplenus YIT 12058]
gi|425727088|gb|EKU89949.1| GTP-binding protein Era [Bacteroides oleiciplenus YIT 12058]
Length = 293
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 182/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++ +
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPQY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ G ++P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADVLLYVTDVVETPDKHNEFVEKVAGM---EIPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E ++ E+IP+SA V+ + + LP P Y+ KD ++ P
Sbjct: 124 SNQEKLVELVEAWKALLPNAEIIPISATTKFNVDYVMKRVKELLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y EVPY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEVPYSVEVVVEQFK-EDAKKIHISAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR ++E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRELERFFGKTIFLETFVKVDKDWRSSDKELRNFGY 290
>gi|406837897|ref|ZP_11097491.1| Like GTP-binding protein [Lactobacillus vini DSM 20605]
Length = 297
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 179/293 (61%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N++IGQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 3 HSGFVAIIGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTTDSQVVFIDTPGI 62
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
+ + + D M+ + + + D ++ +V+A + R D + E + K PI LV+
Sbjct: 63 HKPQSQLGDYMVQAALSTLN-DVDAVLFMVNATQKRGRGDNFIIERL--KKVNQPIFLVI 119
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D ++P ++ +E + + D E+ P+SA G E++ + LP GP YYP D
Sbjct: 120 NKIDQVQPNDLLPFVEDFRQALDFREIYPISALEGINCEELLGAVTNLLPAGPQYYPADQ 179
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++HPERF V E++RE++ R EVP++ V + + K +Q IVVE++SQK
Sbjct: 180 ITDHPERFIVAELVREQVLKLTRQEVPHSVAVVTEKIQRQDQQKVLVQATIVVERSSQKG 239
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIG+GGK LK + T AR IE L KV+LE+ VKV+++WR + L+ GY
Sbjct: 240 ILIGRGGKMLKQIGTQARKQIELLLGDKVFLELWVKVQKDWRDRKVDLQSLGY 292
>gi|313149535|ref|ZP_07811728.1| GTP-binding protein Era [Bacteroides fragilis 3_1_12]
gi|423280589|ref|ZP_17259501.1| GTP-binding protein Era [Bacteroides fragilis HMW 610]
gi|424665180|ref|ZP_18102216.1| GTP-binding protein Era [Bacteroides fragilis HMW 616]
gi|313138302|gb|EFR55662.1| GTP-binding protein Era [Bacteroides fragilis 3_1_12]
gi|404575044|gb|EKA79789.1| GTP-binding protein Era [Bacteroides fragilis HMW 616]
gi|404583796|gb|EKA88469.1| GTP-binding protein Era [Bacteroides fragilis HMW 610]
Length = 293
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 180/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +++ + P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALADADVLLYVTDVIETPDKNNEFIQKV---RQQTAPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVKLVEDWKELLPQAEIIPISAATKFNVDYVMKRIKELLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEQFK-EDAKKIHIHAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K V+LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTVFLETYVKVDKDWRSSDKELRNFGY 290
>gi|373859076|ref|ZP_09601808.1| GTP-binding protein Era [Bacillus sp. 1NLA3E]
gi|372451167|gb|EHP24646.1| GTP-binding protein Era [Bacillus sp. 1NLA3E]
Length = 306
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 182/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N+++GQK++I+++KPQTTR+++ G+ + + Q++ DTPGI K
Sbjct: 16 SIIGRPNVGKSTFLNKVVGQKIAIMSDKPQTTRNKVQGVLTTDDAQLVFIDTPGI-HKPQ 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK + D I+ +V+A + R +E + E + K PI LV+NK DL
Sbjct: 75 HKLGDFMMKVAINTLREVDLILFMVNAEEGFGRGEEFILEKF--QEVKTPIFLVINKIDL 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + + Y++ + E++P+SA G+ +E + + I +P GP YYP D V++HP
Sbjct: 133 VHPDKLFEIIVSYKEKYNFAEIVPISALQGNNIEKVLEQIKRYVPEGPQYYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF + E+IREK EVP++ V ++ R K I V I+VE++SQK I+I
Sbjct: 193 ERFIITELIREKALQLTHEEVPHSIAV-IMEKLDRSDKKGTIHVMASIIVERDSQKGIII 251
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK GK LK + AR DIE+ L KV+LE+ VKV+++WR G L+ +G+
Sbjct: 252 GKQGKMLKEIGQRARKDIENLLGSKVFLELWVKVQKDWRNKMGQLRDFGF 301
>gi|389815824|ref|ZP_10207072.1| GTP-binding protein Era [Planococcus antarcticus DSM 14505]
gi|388465547|gb|EIM07863.1| GTP-binding protein Era [Planococcus antarcticus DSM 14505]
Length = 305
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 179/293 (61%), Gaps = 11/293 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N+++GQK++I+++KPQTTR+++ G+ + + QM+ DTPGI E +
Sbjct: 14 SIIGRPNVGKSTFLNRVVGQKIAIMSDKPQTTRNKVQGVVTTNDSQMVFIDTPGINEPR- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVL---VDACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
H L M+K ++ D ++ + +D +R + +G+ +P+ LV+NK
Sbjct: 73 HKLGDFMLKVAKNTFREVDVLLFVASGIDRVGKEDRYVLEMLKGI-----DVPVFLVINK 127
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + P + K +E Y D E IP+SA G+ VE + I +LP GP YYP D ++
Sbjct: 128 IDQVHPDNLPKIIESYRNEFDFAEAIPISALEGNNVETLLAKINERLPEGPQYYPADQIT 187
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKI 349
+HPERF + E+IREK R E+P++ V + KD I+++ I+VE++SQK
Sbjct: 188 DHPERFIISELIREKALHLTREEIPHSIAVVIEKIAPDSENKDMIRIQATIMVERDSQKG 247
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + T AR DIE+ L KVYLE+ VKV+++WR L+ +G+
Sbjct: 248 IVIGKKGVLLKQIGTRARQDIENLLGSKVYLELWVKVQKDWRNKAMHLRDFGF 300
>gi|241895551|ref|ZP_04782847.1| GTP-binding protein Era [Weissella paramesenteroides ATCC 33313]
gi|241871129|gb|EER74880.1| GTP-binding protein Era [Weissella paramesenteroides ATCC 33313]
Length = 302
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 173/295 (58%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + E QMI DTPGI K
Sbjct: 12 ALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTNEGQMIFMDTPGI-HKPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILL 227
+ L M+K SA +D + +LV+A + E GVGD + P+ L
Sbjct: 71 NSLGDFMVKTAMSALRESDMVWLLVNADQ---------ERGVGDDFIIKRLKESNTPVYL 121
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
++NK DLI E+ ++ Y D E+ P+SA G GV ++ + + + GP YYP
Sbjct: 122 IINKVDLINRAEVLNQIADYSAQMDFAEIFPISALTGEGVPELLAFTMDHMAAGPQYYPA 181
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++HPERF + E+IREK+ R EVP++ V + + + +Q IVVE+ SQ
Sbjct: 182 DQLTDHPERFIMSELIREKVLELTRQEVPHSVAVVIDKIEREDEQRLHVQATIVVERPSQ 241
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGK G +K + T AR DIE L K++LE VKV++ WR L+ YGY
Sbjct: 242 KNIIIGKRGAMIKEIGTRARKDIERLLGDKIFLETWVKVEDRWRDKPQALQSYGY 296
>gi|315223060|ref|ZP_07864939.1| GTP-binding protein Era [Streptococcus anginosus F0211]
gi|315188010|gb|EFU21746.1| GTP-binding protein Era [Streptococcus anginosus F0211]
Length = 299
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVSADENRGKGDDMIMERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPNQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSLARRDIELMLGDKVFLETWVKVKKNWRDKKIDLADFGY 294
>gi|218262399|ref|ZP_03476879.1| hypothetical protein PRABACTJOHN_02554 [Parabacteroides johnsonii
DSM 18315]
gi|423343032|ref|ZP_17320746.1| GTP-binding protein Era [Parabacteroides johnsonii CL02T12C29]
gi|218223402|gb|EEC96052.1| hypothetical protein PRABACTJOHN_02554 [Parabacteroides johnsonii
DSM 18315]
gi|409216708|gb|EKN09691.1| GTP-binding protein Era [Parabacteroides johnsonii CL02T12C29]
Length = 296
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIIGIVNTADMQIVYSDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + +SM+ + + G +AD ++ + D + ++ +E L++ K + P+LL+
Sbjct: 65 VLHPNYKLQESMLNFSQSALG-DADVLLYVTDVVEKIDKNEEFLQKV---QKVECPVLLL 120
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDTTTQQELEKLVAEWKELLPKAEIIPISALSNFNIDYVKRRVEDLMPESPPYFEKD 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ ++VE++SQK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEEAELIH-IKALVIVERDSQK 239
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG G+ALK + AR DIE F KKV+LE+ VKV+++WR + +LK++GY
Sbjct: 240 GIIIGHRGQALKKVGAMARKDIERFFDKKVFLEMFVKVEKDWRNRDNMLKNFGY 293
>gi|154494317|ref|ZP_02033637.1| hypothetical protein PARMER_03671 [Parabacteroides merdae ATCC
43184]
gi|423725492|ref|ZP_17699629.1| GTP-binding protein Era [Parabacteroides merdae CL09T00C40]
gi|154085761|gb|EDN84806.1| ribosome biogenesis GTPase Era [Parabacteroides merdae ATCC 43184]
gi|409234616|gb|EKN27444.1| GTP-binding protein Era [Parabacteroides merdae CL09T00C40]
Length = 296
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIIGIVNTADMQIVYSDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + +SM+ + + G +AD ++ + D + ++ +E L++ K + P+LL+
Sbjct: 65 VLHPNYKLQESMLNFSQSALG-DADVLLYVTDVVEKIDKNEEFLQKV---QKVECPVLLL 120
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDTTTQPELEKLVAEWKELLPKAEIIPISALSNFNIDYVKRRVEDLMPESPPYFEKD 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE++SQK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEEAELIH-IKALIIVERDSQK 239
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG G+ALK + AR DIE F KKV+LE+ VKV+++WR + +LK++GY
Sbjct: 240 GIIIGYRGQALKKVGAMARKDIERFFDKKVFLEMFVKVEKDWRNRDNMLKNFGY 293
>gi|220928031|ref|YP_002504940.1| GTP-binding protein Era [Clostridium cellulolyticum H10]
gi|254783293|sp|B8I736.1|ERA_CLOCE RecName: Full=GTPase Era
gi|219998359|gb|ACL74960.1| GTP-binding protein Era [Clostridium cellulolyticum H10]
Length = 298
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PNVGKSTL N + GQK++I++NKPQTTR+ I G+ + E Q+IL DTPGI + K
Sbjct: 9 SVIGRPNVGKSTLLNTITGQKIAIMSNKPQTTRNTIRGVITNKECQLILIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+ + M+ NV S I D I+ LV+A P D + + + + K P+ L+LNK D
Sbjct: 69 KLGEYMV--NVASETIKEVDLILFLVEANTQPGAQDVNIIQQL--KQIKTPVFLILNKVD 124
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
LI ++ ++ Y K D +IP+SA G++ I L +P GP ++ +D++++
Sbjct: 125 LISKDKLLAIIDSYSKLMDFKAIIPISALKNDGIDLILKEALDYIPEGPQFFSEDMLTDQ 184
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE+ E+IREK+ + +EVP+ V V S+K R IQ I EK+S K I+IG
Sbjct: 185 PEKVIAAEMIREKVLLNLDDEVPHGVGVEVTSFKEREDGLINIQATIYCEKSSHKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + +AAR +IE L K++LE+ VKVK +WR + +LK GY
Sbjct: 245 KQGNMLKKIGSAARYEIERLLDTKIFLELWVKVKPDWRNSDNMLKTLGY 293
>gi|294618704|ref|ZP_06698237.1| GTP-binding protein Era [Enterococcus faecium E1679]
gi|291595047|gb|EFF26391.1| GTP-binding protein Era [Enterococcus faecium E1679]
Length = 299
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 189/296 (63%), Gaps = 7/296 (2%)
Query: 111 PNHKSV----LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS +G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFIISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIIIGKGGKMLKQVGTKARKDIENLLGDKVFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|365924952|ref|ZP_09447715.1| GTPase Era [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420266356|ref|ZP_14768832.1| Like GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394425640|gb|EJE98582.1| Like GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 300
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 175/293 (59%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST NQ+IG+K++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFIAIIGRPNVGKSTFLNQVIGEKIAIMSDKAQTTRNKIQGIYTTDDTQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D +V +V+A + R DE + + + + K PI LV+
Sbjct: 66 -HKPHSRLGDFMVESALSTLNEVDAVVFMVNATEKKGRGDEFIIKRL--KQVKQPIFLVI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P + ++ Y K D EV P+SA G ++ I LP GP +YP D
Sbjct: 123 NKIDKIHPDALLGIVDSYRKDLDFAEVYPISALQGINCPELVSAISNVLPEGPQFYPDDQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++HPERF GE+IRE++ EVP++ V V + K +Q I+VE++SQK
Sbjct: 183 VTDHPERFIAGELIREQVLDLTHEEVPHSVAVIVERIRRENEEKVLVQATIIVERSSQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIGKGGK LK + T AR +IE L K+YLE+ VKV+ NW+ + L+ GY
Sbjct: 243 ILIGKGGKMLKTIGTRARKEIEAMLGDKIYLELWVKVQPNWKDKKADLQALGY 295
>gi|293556346|ref|ZP_06674927.1| GTP-binding protein Era [Enterococcus faecium E1039]
gi|291601413|gb|EFF31684.1| GTP-binding protein Era [Enterococcus faecium E1039]
Length = 299
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 189/296 (63%), Gaps = 7/296 (2%)
Query: 111 PNHKSV----LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS +G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L K++LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIIIGKGGKMLKQVGTKARKDIENLLGDKIFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|260910018|ref|ZP_05916701.1| GTP-binding protein Era [Prevotella sp. oral taxon 472 str. F0295]
gi|260635848|gb|EEX53855.1| GTP-binding protein Era [Prevotella sp. oral taxon 472 str. F0295]
Length = 293
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 176/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + PE Q++ DTPGI++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTPEVQIVFSDTPGILKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ +V SA +AD ++ + D + PE+ + LE+ G K+P+LL++NK D
Sbjct: 68 KLQESMLAFSV-SALNDADVLLYVTDVVEDPEKNADFLEKVRG---MKIPVLLLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + E++P+SAK G + + I LP P Y+ KD +++ P
Sbjct: 124 SDQKSLGDIVERWHALLPNAEILPISAKNKFGTDLLLRRIQELLPESPPYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE+ SQK I+IG
Sbjct: 184 ARFFVSEIIREKILLYYDKEIPYSVEVKVERFK-ETEKKININAVIYVERESQKGIVIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F K+VYLE VKV ++WR + L +GY
Sbjct: 243 QGVALKKVSTEARKALERFFDKEVYLETFVKVDKDWRSSKKELDSFGYN 291
>gi|336398031|ref|ZP_08578831.1| GTP-binding protein Era-like-protein [Prevotella multisaccharivorax
DSM 17128]
gi|336067767|gb|EGN56401.1| GTP-binding protein Era-like-protein [Prevotella multisaccharivorax
DSM 17128]
Length = 298
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 184/298 (61%), Gaps = 15/298 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 9 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDCQIVFSDTPGVLKPNY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M M++ SA +AD ++ + D ++PE+ + LE+ + K+P+L+++NK D
Sbjct: 69 KM-QEFMLQFSESALADADILLYVTDVVESPEKNMDFLEKVA---QMKIPVLVLINKIDE 124
Query: 235 IKP-------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+K GEI +K W+E F + E++PVSA G++ + I LP PAY+ K
Sbjct: 125 LKGDNSTERLGEIVEK--WHELFPNA-EILPVSAANKFGIDMLMKRIKELLPESPAYFDK 181
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++ P +FFV EIIREKI Y E+PY+ +V V +K +I I VE++SQ
Sbjct: 182 DQLTDKPAKFFVSEIIREKILRYYDKEIPYSVEVVVERFK-EDEHHIYINAVIYVERDSQ 240
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
K I+IG G ALK ++T AR +E F K +YLE+ VKV ++WR E L ++GY Q
Sbjct: 241 KGIIIGHQGMALKKVSTEARKSLEHFFGKAIYLELFVKVDKDWRNSERELDNFGYNPQ 298
>gi|325299809|ref|YP_004259726.1| GTP-binding protein Era-like-protein [Bacteroides salanitronis DSM
18170]
gi|324319362|gb|ADY37253.1| GTP-binding protein Era-like-protein [Bacteroides salanitronis DSM
18170]
Length = 293
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 179/290 (61%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLVGERVSIATFKAQTTRHRIMGILNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA ++AD ++ + D + P++ E +E+ +P+LL++NK DL
Sbjct: 68 KLQESMLNFS-ESALVDADVLLYVTDTIEKPDKNKEFVEKV---RNLDIPVLLLVNKIDL 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ K +E W+ D E+IP+SAK V+ + I LP P Y+ KD ++
Sbjct: 124 TNQDNLVKLVEEWHGLLPDA-EIIPISAKAKFNVDAVMKRITELLPDSPPYFGKDQWTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
P RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ SQK I+I
Sbjct: 183 PARFFVTEIIREKILLYYDKEIPYSVEVVVEQFKEE--AKSIHIHAVIYVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G GKALK +AT AR +E F QK +YLE VKV ++WR + LK++GY
Sbjct: 241 GHQGKALKKVATEARKALERFFQKSIYLETFVKVDKDWRSSDKELKNFGY 290
>gi|297181617|gb|ADI17801.1| GTPase [uncultured Sphingobacteriales bacterium HF0130_33B19]
Length = 292
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 183/298 (61%), Gaps = 25/298 (8%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +IG KLSI+T K QTTRHRILGI + ++Q++ DTPG+I+
Sbjct: 9 NIIGNPNVGKSTLMNALIGHKLSIITPKAQTTRHRILGILNEKDFQIVFSDTPGVIDPS- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK--DKL-----PILL 227
+ L MM V SA +AD ++ ++ EI E+G+ D K +KL P+L+
Sbjct: 68 YKLQENMMNFVYSALHDADVLIYMI----------EIGEKGLKDAKLFEKLKTTDVPVLM 117
Query: 228 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
+LNK DL +++++E W K + D ++P+SA ++ I+ ++ LPL P Y+
Sbjct: 118 LLNKIDLADQDFVSQQMEIWNSKLPNAD-LLPISALNNFNLDVIKKKLVDMLPLSPPYFD 176
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEK 344
K+ +++ ERFF EIIREKI Y+ E+PY+ Q+ V + KD +++ I V +
Sbjct: 177 KESITDKSERFFTEEIIREKILKHYKKEIPYSVQIQVEEFVNE---KDIVKIRAIIYVMR 233
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+QK I+IG G LK + + AR DIE L+KKV+LE VK+K+NWR D LK +GY
Sbjct: 234 ETQKGIIIGHKGMGLKRIGSEARRDIEAMLEKKVFLETPVKIKKNWRDDNKQLKKFGY 291
>gi|295695440|ref|YP_003588678.1| GTP-binding protein Era [Kyrpidia tusciae DSM 2912]
gi|295411042|gb|ADG05534.1| GTP-binding protein Era [Kyrpidia tusciae DSM 2912]
Length = 300
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 174/292 (59%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N++IG K++I+++KPQTTR+RI G+ + Q+I DTPG+ K
Sbjct: 13 ALVGRPNVGKSTLLNRLIGTKIAIMSDKPQTTRNRIRGVLTRENGQVIFLDTPGVHRPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK--APERIDEILEEGVGDHKDKL--PILLVLN 230
H L M + + D ++ ++D P E+ + DH + P+ LV+N
Sbjct: 72 HRLGDYMNRLALATLQEVDLVLFVIDVTSKFGPG------EQVILDHLQGVETPVFLVIN 125
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K DL+ P E+ ++ + K EV+PVSA G ++ + + I LP GPAYYP D V
Sbjct: 126 KIDLVSPEELLPMIDEHRKRYPFREVVPVSAVKGTNLDRLEERIFATLPQGPAYYPADQV 185
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++HPE F V E++RE++ R EVP++ V V R +I+ +V EK SQK I
Sbjct: 186 TDHPESFIVAELVREQVLNLTREEVPHSVAVTVEEITPRENGLLYIRAVVVTEKESQKAI 245
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LIG+ G LK + AR +IE L +VYL++ VKVK++WR E +L+++GY
Sbjct: 246 LIGREGGMLKRVGQRARREIEALLGSRVYLDLWVKVKKDWRNREPILRNFGY 297
>gi|345885000|ref|ZP_08836394.1| GTP-binding protein Era [Prevotella sp. C561]
gi|345042149|gb|EGW46256.1| GTP-binding protein Era [Prevotella sp. C561]
Length = 293
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 180/292 (61%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDSQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNK--- 231
M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L++NK
Sbjct: 68 KM-QEMMLQFSESALADADILLYVTDVIEDPEKNMDFLEKVA---KMSIPVILLINKIDE 123
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D K G++ K W+ + E++P+SAK G + + + LP PA++ KD ++
Sbjct: 124 SDQKKLGDLVTK--WHGLLPNA-EILPISAKNKFGTDILLKRVHELLPESPAFFDKDQLT 180
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ P +FFV EIIREKI Y E+PY+ +V V S+K + I I VE+NSQK I+
Sbjct: 181 DKPAKFFVSEIIREKILRYYDKEIPYSVEVVVESFK-EDDRQIHINAVIYVERNSQKGII 239
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
IG G ALK ++T AR +E F KK++LE VKV ++WR + LKH+GY
Sbjct: 240 IGHQGMALKKVSTEARKSLERFFDKKIFLETFVKVDKDWRNSQKELKHFGYN 291
>gi|350266730|ref|YP_004878037.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599617|gb|AEP87405.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 301
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKLQNMST--PVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLTQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|374602357|ref|ZP_09675350.1| GTPase Era [Paenibacillus dendritiformis C454]
gi|374391959|gb|EHQ63288.1| GTPase Era [Paenibacillus dendritiformis C454]
Length = 309
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 179/289 (61%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI ++K
Sbjct: 21 AIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGIHKRKS 80
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+ D M V +N + I+ LVD D+ + E + K K P++LV+NK D
Sbjct: 81 KLGD--YMNQVAYNTLNEVEVILFLVDVSAGLGSGDKFVMEQLA--KVKTPVILVMNKID 136
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P E+ ++ Y + D E++P+SA +G+ V + + + T +P GP YYP D +++H
Sbjct: 137 QVHPDELPPMIKSYHELFDFAEIVPISALHGNNVTRLLEVLGTYMPEGPKYYPDDQITDH 196
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE+F V E+IREKI R E+P++ V + + + +I I VE++SQK I+IG
Sbjct: 197 PEQFVVAELIREKILHLTREEIPHSIAVAIEDMRVQDNGVVYISAVIYVERDSQKGIVIG 256
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L K ++E+ VKVK++WR + +L+ G+
Sbjct: 257 KQGALLKEIGKLARQDIEHLLGSKTFIELWVKVKKDWRNQDRILRDLGF 305
>gi|402831476|ref|ZP_10880159.1| GTP-binding protein Era [Capnocytophaga sp. CM59]
gi|402281874|gb|EJU30492.1| GTP-binding protein Era [Capnocytophaga sp. CM59]
Length = 292
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 184/294 (62%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G++LSI+T+K QTTRHRI GI SG ++Q+I DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSTLLNALVGERLSIITSKAQTTRHRIFGIVSGEDFQVIFSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
II K + L + MM V+ A +AD ++ +++ + + +E ++ ++ K+P+L++
Sbjct: 62 II-KPAYQLQASMMDFVKDAFEDADILIYMIEIGEKDLKDEEFFKK---INQAKVPVLVL 117
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D + + L ++++ E+ +SA VE + IL LP PA+YPKD
Sbjct: 118 INKIDRSDEATVKEALAYWQEKVPKGEIYAISALENFNVEPLFHRILELLPESPAFYPKD 177
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ PERFFV E IREKI + Y+ EVPY+ +V ++ I+ I+VE+ SQK
Sbjct: 178 QLTDKPERFFVNETIREKILLNYKKEVPYSVEVETETFSETEEIIR-IRSIIMVERESQK 236
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG G+ALK + AR D+E F K+++LE+ VKV +NWR D L+ +GY
Sbjct: 237 GIIIGHRGEALKKVGIQARYDLEKFFGKQIHLELYVKVNKNWRSDLKQLRRFGY 290
>gi|251796247|ref|YP_003010978.1| GTP-binding protein Era [Paenibacillus sp. JDR-2]
gi|247543873|gb|ACT00892.1| GTP-binding protein Era [Paenibacillus sp. JDR-2]
Length = 299
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 170/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + Q++ DTPGI K
Sbjct: 12 AIIGRPNVGKSTLMNHLIGQKIAIMSDKPQTTRNKIHGVYTTDTSQIVFLDTPGI-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L MMK A + ++ L+D D + E + K P+ LV+NK D
Sbjct: 71 SKLGDYMMKTAEGALKEVEAVLFLIDVADGLGGGDRFIIEQL--KKVDTPVFLVMNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++P ++ + Y+ E++P+SA G+ VE + + LP GP YYP D V++HP
Sbjct: 129 VQPEQLLSTITQYKDLYPFAEIVPISALQGNNVETLLAQLQKYLPEGPQYYPADQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F V E+IREKI R E+P++ V + K + +I I VE++SQK I+IGK
Sbjct: 189 EQFVVSELIREKILHMTREEIPHSIAVGIEDMKVQENGVVYIGAVIFVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L + +LE+ VKVK++WR E +LK +G+
Sbjct: 249 KGALLKEVGKQARRDIEALLGSRTFLELWVKVKKDWRNQERVLKDFGF 296
>gi|257879930|ref|ZP_05659583.1| GTP-binding protein Era [Enterococcus faecium 1,230,933]
gi|424962633|ref|ZP_18376955.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1190]
gi|424974026|ref|ZP_18387279.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1137]
gi|424980839|ref|ZP_18393605.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV99]
gi|425021039|ref|ZP_18431319.1| ribosome biogenesis GTPase Era [Enterococcus faecium C497]
gi|425023291|ref|ZP_18433420.1| ribosome biogenesis GTPase Era [Enterococcus faecium C1904]
gi|425044722|ref|ZP_18448859.1| ribosome biogenesis GTPase Era [Enterococcus faecium 510]
gi|425051686|ref|ZP_18455341.1| ribosome biogenesis GTPase Era [Enterococcus faecium 506]
gi|431546402|ref|ZP_19519027.1| GTPase Era [Enterococcus faecium E1731]
gi|431755137|ref|ZP_19543792.1| GTPase Era [Enterococcus faecium E2883]
gi|257814158|gb|EEV42916.1| GTP-binding protein Era [Enterococcus faecium 1,230,933]
gi|402951533|gb|EJX69449.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1190]
gi|402957480|gb|EJX74869.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1137]
gi|402965339|gb|EJX82064.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV99]
gi|403007888|gb|EJY21434.1| ribosome biogenesis GTPase Era [Enterococcus faecium C497]
gi|403010316|gb|EJY23701.1| ribosome biogenesis GTPase Era [Enterococcus faecium C1904]
gi|403028937|gb|EJY40723.1| ribosome biogenesis GTPase Era [Enterococcus faecium 510]
gi|403037155|gb|EJY48467.1| ribosome biogenesis GTPase Era [Enterococcus faecium 506]
gi|430591721|gb|ELB29750.1| GTPase Era [Enterococcus faecium E1731]
gi|430617612|gb|ELB54483.1| GTPase Era [Enterococcus faecium E2883]
Length = 299
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 189/296 (63%), Gaps = 7/296 (2%)
Query: 111 PNHKSV----LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS +G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ +A D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYTALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIIIGKGGKMLKQVGTKARKDIENLLGDKVFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|386759126|ref|YP_006232342.1| hypothetical protein MY9_2553 [Bacillus sp. JS]
gi|384932408|gb|AFI29086.1| Era [Bacillus sp. JS]
Length = 301
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QQMSTPVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|313205716|ref|YP_004044893.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|383485032|ref|YP_005393944.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|386322300|ref|YP_006018462.1| GTPase [Riemerella anatipestifer RA-GD]
gi|416111288|ref|ZP_11592545.1| GTP-binding protein Era [Riemerella anatipestifer RA-YM]
gi|442315109|ref|YP_007356412.1| GTPase [Riemerella anatipestifer RA-CH-2]
gi|312445032|gb|ADQ81387.1| GTP-binding protein Era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|315022889|gb|EFT35913.1| GTP-binding protein Era [Riemerella anatipestifer RA-YM]
gi|325336843|gb|ADZ13117.1| GTPase [Riemerella anatipestifer RA-GD]
gi|380459717|gb|AFD55401.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|441484032|gb|AGC40718.1| GTPase [Riemerella anatipestifer RA-CH-2]
Length = 291
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 181/290 (62%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + P+ Q++ DTPG+++ K
Sbjct: 8 NIVGKPNAGKSTLLNQLMGEKLAIVTKKAQTTRHRIFGIYNEPDLQIVFSDTPGVLDPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDAC--KAPERIDEILEEGVGDHKDKLPILLVLNKK 232
+ L MM V+ + +AD + +VD AP E L E + +K +P+L+++NK
Sbjct: 67 YGLQEKMMDFVKDSLQDADVFLFIVDVTDKDAP---SEFLIEKL--NKIPVPVLILINKI 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D E+ K + ++ + E++P+SA G + I + + LP P YY K+ ++
Sbjct: 122 DQTNQEELEKSMHFWHEQIPKAEILPISALEGFNTDVILPKLKSLLPENPPYYDKEQFTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
ERFFV E IREKI + Y E+PY+ +V +K + FI I VE++SQK ILI
Sbjct: 182 KSERFFVNEAIREKILLNYEKEIPYSVEVVTEMFKEK-EGIIFIDSIIYVERDSQKGILI 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+A+K + T ARLD+E F KK++L + VKV+++WR++E LK +GY
Sbjct: 241 GHKGEAIKKVGTQARLDLEKFFDKKIHLNLFVKVRKDWRKNERDLKSFGY 290
>gi|218781247|ref|YP_002432565.1| GTP-binding protein Era [Desulfatibacillum alkenivorans AK-01]
gi|218762631|gb|ACL05097.1| GTP-binding protein Era [Desulfatibacillum alkenivorans AK-01]
Length = 297
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 180/294 (61%), Gaps = 16/294 (5%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI- 174
++G PNVGKSTL NQM+G+K+SI ++KPQTTR+RILG+ + Q+++ DTPGI K
Sbjct: 12 MIGAPNVGKSTLLNQMLGEKVSITSSKPQTTRNRILGVVHREKAQLVMLDTPGIHSAKSP 71
Query: 175 ---HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
HM+D M + G + D I+ +VDA K + + +G+ K K+P++LVLNK
Sbjct: 72 LNKHMVDVAM----QCMG-DVDLIMFVVDASKPDPNSERLALKGLA--KQKMPVILVLNK 124
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
DLIK + + E D ++PVSA+ G VE++ + +LP GP ++P+D ++
Sbjct: 125 IDLIKKETLLPLIAKLEPLADFKAIVPVSAETGEQVEELIAILEEQLPQGPPFFPEDSLT 184
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR---PTAKDFIQVEIVVEKNSQK 348
+ PERF E+IREK+F E+PY+ V + S+ + P K I I VE++SQK
Sbjct: 185 DMPERFVAAEMIREKVFRMTSQEIPYSVAVTLDSFTEQEKPPMVK--ISAVIHVERDSQK 242
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + T+AR +IE + KV+L++ V+V++NW D ++ GY
Sbjct: 243 GIIIGKQGAMLKKIGTSARQEIERMVGVKVFLKLFVRVEKNWSTDTKAMRRLGY 296
>gi|297584643|ref|YP_003700423.1| GTP-binding protein Era [Bacillus selenitireducens MLS10]
gi|297143100|gb|ADH99857.1| GTP-binding protein Era [Bacillus selenitireducens MLS10]
Length = 302
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 175/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ++GQK++I+++KPQTTR+RI G+ + Q++ DTPGI + K
Sbjct: 12 ALVGRPNVGKSTLLNQVLGQKIAIMSDKPQTTRNRIQGVLTDERGQIVFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M K + A D ++ LVDA + DE + + + + P+ LV+NK D
Sbjct: 71 HRLGDFMTKLAQQALREVDVVLFLVDAKEGKGAGDEYIIRKLENLET--PVFLVINKIDE 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ + Y+ EVIPVSA G+ VE + + + L GP YYP+D V++HP
Sbjct: 129 VHPEELLSIIAGYKDLYPFAEVIPVSALNGNNVETLLEQVFKYLEPGPMYYPEDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA-KDFIQVEIVVEKNSQKIILIG 353
ERF + E+IREKI EVP++ V + K R K ++ ++VE+ SQK I+IG
Sbjct: 189 ERFLISEMIREKILHMTEEEVPHSIAVEIEQIKRRKKGNKVYVAAVVIVERKSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G +K + AR DI++ L ++LE+ VKV+E+WR LK +GY
Sbjct: 249 KQGAMIKEVGKQAREDIKNLLGTDIFLELFVKVEEDWRNKPRTLKEFGY 297
>gi|189463676|ref|ZP_03012461.1| hypothetical protein BACINT_00007 [Bacteroides intestinalis DSM
17393]
gi|189438626|gb|EDV07611.1| ribosome biogenesis GTPase Era [Bacteroides intestinalis DSM 17393]
Length = 293
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 182/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++ +
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPQY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ H + +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADVLLYVTDVVETPDKHNEFVEKVA--HME-IPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E ++ E+IP+SA V+ + + LP P Y+ KD ++ P
Sbjct: 124 SNQEKLVELVEAWKALLPNAEIIPISATTKFNVDYVMKRVKELLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEQFK-EDAKKIHISAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTIFLETFVKVDKDWRSSDKELRNFGY 290
>gi|239618466|ref|YP_002941788.1| GTP-binding protein Era [Kosmotoga olearia TBF 19.5.1]
gi|239507297|gb|ACR80784.1| GTP-binding protein Era [Kosmotoga olearia TBF 19.5.1]
Length = 305
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 187/300 (62%), Gaps = 7/300 (2%)
Query: 103 EEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 162
E+ DY S S++GKPNVGKS+L NQ++G+K++IV++K QTTR+RI GI + Q+I
Sbjct: 3 EKSDYRS--GIVSLVGKPNVGKSSLVNQLVGEKVAIVSDKVQTTRNRIGGIVTTERGQVI 60
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 222
YDTPGI K +H L ++K SA +D I ++D ++ D ++ + V +
Sbjct: 61 FYDTPGI-HKPLHKLGGYLVKITVSALNGSDLIAAILDISDGIKKSDFLVAKHV--NSSN 117
Query: 223 LPILLVLNKKDLIKP-GEIAKKLEWYEK-FTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
+P+ LV+NK D++K +I + LE K F +V++ PVSA G G+++ + ++ ++P
Sbjct: 118 IPVFLVINKIDVVKTRKKITEFLEEGTKLFKNVEKTFPVSAITGEGIKEFLEAVIERMPP 177
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP YP+D++++ RF EIIREKI + + EVP++ V++ + R +I+ EI
Sbjct: 178 GPPLYPEDVITDRSARFMASEIIREKILLLTKEEVPHSVGVSIEEFTYRENGTLYIRGEI 237
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
VVE+ +QK I+IGKGG +K + T AR D+E KV+L++ VKV+ WR+ + + +
Sbjct: 238 VVERPTQKAIIIGKGGTMIKKIGTLARQDMEYLFDTKVFLDLFVKVRRKWREKDNFIMDF 297
>gi|160890562|ref|ZP_02071565.1| hypothetical protein BACUNI_03005 [Bacteroides uniformis ATCC 8492]
gi|270295702|ref|ZP_06201902.1| GTP-binding protein Era [Bacteroides sp. D20]
gi|317479894|ref|ZP_07939010.1| GTP-binding protein Era [Bacteroides sp. 4_1_36]
gi|156859561|gb|EDO52992.1| ribosome biogenesis GTPase Era [Bacteroides uniformis ATCC 8492]
gi|270273106|gb|EFA18968.1| GTP-binding protein Era [Bacteroides sp. D20]
gi|316903941|gb|EFV25779.1| GTP-binding protein Era [Bacteroides sp. 4_1_36]
Length = 293
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 184/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ ++ +E+ VG H D +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADVLLYVTDVVETPDKHNDFVEK-VG-HLD-VPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E +++ E+IP+SA V+ + + LP P Y+ KD ++ P
Sbjct: 124 SNQEKLVELVEAWKELLPKAEIIPISATSKFNVDYVMKRVKELLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVTEIIREKILLYYDKEIPYSVEVMVEQFKEE-AKKIHISAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTIFLETFVKVDKDWRSSDKELRNFGY 290
>gi|150003044|ref|YP_001297788.1| GTP-binding protein Era [Bacteroides vulgatus ATCC 8482]
gi|294775668|ref|ZP_06741176.1| GTP-binding protein Era [Bacteroides vulgatus PC510]
gi|319642180|ref|ZP_07996840.1| GTP-binding protein [Bacteroides sp. 3_1_40A]
gi|345518208|ref|ZP_08797663.1| GTP-binding protein Era [Bacteroides sp. 4_3_47FAA]
gi|423314851|ref|ZP_17292783.1| GTP-binding protein Era [Bacteroides vulgatus CL09T03C04]
gi|149931468|gb|ABR38166.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|254836475|gb|EET16784.1| GTP-binding protein Era [Bacteroides sp. 4_3_47FAA]
gi|294450512|gb|EFG19004.1| GTP-binding protein Era [Bacteroides vulgatus PC510]
gi|317386166|gb|EFV67085.1| GTP-binding protein [Bacteroides sp. 3_1_40A]
gi|392681033|gb|EIY74395.1| GTP-binding protein Era [Bacteroides vulgatus CL09T03C04]
Length = 293
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 181/290 (62%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPGVVKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA ++AD ++ + D + ++ + +E+ K+P+LL++NK DL
Sbjct: 68 KLQESMLNFS-ESALVDADILLYVTDVVEKTDKNADFIEKV---RNVKVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ K +E W+E+ E+IP+SA V+ + I LP P Y+ KD ++
Sbjct: 124 TNQEDLVKLVEAWHEQLPQA-EIIPISATSKFNVDTVMKRIKELLPDSPPYFGKDQWTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
P RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ SQK I+I
Sbjct: 183 PARFFVTEIIREKILLYYDKEIPYSVEVVVEQFK--EDAKSIHINAVIYVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G+ALK +AT AR +E F QK +YLE VKV ++WR + LK++GY
Sbjct: 241 GKQGRALKKVATEARKTLEHFFQKSIYLETFVKVDKDWRSSDKELKNFGY 290
>gi|237708021|ref|ZP_04538502.1| GTP-binding protein Era [Bacteroides sp. 9_1_42FAA]
gi|265754192|ref|ZP_06089381.1| GTP-binding protein Era [Bacteroides sp. 3_1_33FAA]
gi|345515929|ref|ZP_08795426.1| GTP-binding protein Era [Bacteroides dorei 5_1_36/D4]
gi|423229909|ref|ZP_17216314.1| GTP-binding protein Era [Bacteroides dorei CL02T00C15]
gi|423241562|ref|ZP_17222674.1| GTP-binding protein Era [Bacteroides dorei CL03T12C01]
gi|423246999|ref|ZP_17228050.1| GTP-binding protein Era [Bacteroides dorei CL02T12C06]
gi|229436559|gb|EEO46636.1| GTP-binding protein Era [Bacteroides dorei 5_1_36/D4]
gi|229458007|gb|EEO63728.1| GTP-binding protein Era [Bacteroides sp. 9_1_42FAA]
gi|263234901|gb|EEZ20456.1| GTP-binding protein Era [Bacteroides sp. 3_1_33FAA]
gi|392632700|gb|EIY26658.1| GTP-binding protein Era [Bacteroides dorei CL02T00C15]
gi|392633760|gb|EIY27698.1| GTP-binding protein Era [Bacteroides dorei CL02T12C06]
gi|392641148|gb|EIY34933.1| GTP-binding protein Era [Bacteroides dorei CL03T12C01]
Length = 293
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 181/290 (62%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPGVVKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA ++AD ++ + D + ++ + +E+ K+P+LL++NK DL
Sbjct: 68 KLQESMLNFS-ESALVDADILLYVTDVVEKTDKNADFIEKV---RNVKVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ K +E W+E+ E+IP+SA V+ + I LP P Y+ KD ++
Sbjct: 124 TNQEDLVKLVEAWHEQLPQA-EIIPISATSKFNVDTVMKRIRELLPDSPPYFGKDQWTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
P RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ SQK I+I
Sbjct: 183 PARFFVTEIIREKILLYYDKEIPYSVEVVVEHFK--EDAKSIHINAVIYVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G+ALK +AT AR +E F QK +YLE VKV ++WR + LK++GY
Sbjct: 241 GKQGRALKKVATEARKTLEHFFQKSIYLETFVKVDKDWRSSDKELKNFGY 290
>gi|255693538|ref|ZP_05417213.1| GTP-binding protein Era [Bacteroides finegoldii DSM 17565]
gi|423301590|ref|ZP_17279613.1| GTP-binding protein Era [Bacteroides finegoldii CL09T03C10]
gi|260620676|gb|EEX43547.1| ribosome biogenesis GTPase Era [Bacteroides finegoldii DSM 17565]
gi|408471583|gb|EKJ90114.1| GTP-binding protein Era [Bacteroides finegoldii CL09T03C10]
Length = 293
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 180/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E + + + +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMAKV---RQMTVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVKLVEDWKELLPQAEIIPISAASKFNVDYVMKRIKELLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I+ I VE+ SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVAVEEFKEE-AKKIHIRAVIYVERESQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR ++E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRELERFFGKTIFLETYVKVDKDWRSSDKELRNFGY 290
>gi|288930106|ref|ZP_06423944.1| GTP-binding protein Era [Prevotella sp. oral taxon 317 str. F0108]
gi|288328579|gb|EFC67172.1| GTP-binding protein Era [Prevotella sp. oral taxon 317 str. F0108]
Length = 293
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 176/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + PE Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTPEMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ +V SA +AD ++ + D + PE+ + LE+ G K+P+LL++NK D
Sbjct: 68 KLQESMLAFSV-SALSDADVLLYVTDVVEDPEKNADFLEKVRG---MKIPVLLLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + E++P+SAK G + + I LP P Y+ KD +++ P
Sbjct: 124 SDQKTLGDIVERWHALLPKAEILPISAKNKFGTDLLLRRIQELLPESPPYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE+ SQK I+IG
Sbjct: 184 ARFFVSEIIREKILLYYDKEIPYSVEVKVERFK-ETEKKIHINAVIYVERESQKGIVIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK +++ AR +E F K+VYLE VKV ++WR + L +GY
Sbjct: 243 QGVALKKVSSEARKTLERFFDKEVYLETFVKVDKDWRSSKKELDSFGYN 291
>gi|398306987|ref|ZP_10510573.1| GTPase Era [Bacillus vallismortis DV1-F-3]
Length = 301
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK ++ D I+ +++A + + DE + E + + P+ L++NK D
Sbjct: 71 HKLGDFMMKVAQNTLKEVDMILFMINAEEGYGKGDEFIIEKLQNLST--PVFLIVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++ Y E++P+SA G+ +E + I LP GP +YP D V++HP
Sbjct: 129 IHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLTQIEAYLPEGPQFYPSDQVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R E+P++ V + S K + + IVVE++SQK I+IGK
Sbjct: 189 ERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L +VYLE+ VKV+++WR L+ +G+
Sbjct: 249 KGSLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGF 296
>gi|335032377|ref|ZP_08525774.1| ribosome biogenesis GTPase Era [Streptococcus anginosus SK52 = DSM
20563]
gi|333767046|gb|EGL44310.1| ribosome biogenesis GTPase Era [Streptococcus anginosus SK52 = DSM
20563]
Length = 299
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHKSKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVSADEKRGKGDDMIMERL--KVAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P + +++HP
Sbjct: 126 VHPNQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPAEQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|423304012|ref|ZP_17282011.1| GTP-binding protein Era [Bacteroides uniformis CL03T00C23]
gi|423307264|ref|ZP_17285254.1| GTP-binding protein Era [Bacteroides uniformis CL03T12C37]
gi|392685940|gb|EIY79248.1| GTP-binding protein Era [Bacteroides uniformis CL03T00C23]
gi|392690516|gb|EIY83779.1| GTP-binding protein Era [Bacteroides uniformis CL03T12C37]
Length = 314
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 184/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 29 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 88
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ ++ +E+ VG H D +P+LL++NK DL
Sbjct: 89 KLQESMLNFST-SALADADVLLYVTDVVETPDKHNDFVEK-VG-HLD-VPVLLLINKIDL 144
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E +++ E+IP+SA V+ + + LP P Y+ KD ++ P
Sbjct: 145 SNQEKLVELVEAWKELLPKAEIIPISATSKFNVDYVMKRVKELLPDSPPYFDKDQWTDKP 204
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 205 ARFFVTEIIREKILLYYDKEIPYSVEVMVEQFKEE-AKKIHISAVIYVERDSQKGIIIGK 263
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 264 QGKALKKVATEARRDLERFFGKTIFLETFVKVDKDWRSSDKELRNFGY 311
>gi|350566286|ref|ZP_08934971.1| GTP-binding protein Era [Peptoniphilus indolicus ATCC 29427]
gi|348662912|gb|EGY79540.1| GTP-binding protein Era [Peptoniphilus indolicus ATCC 29427]
Length = 296
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 176/289 (60%), Gaps = 2/289 (0%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ++GQK+S ++NKPQTTR++I I + ++Q + DTPGI K
Sbjct: 8 TIIGRPNVGKSTLLNQVVGQKISAISNKPQTTRNKITFIYTEEDFQAVFLDTPGIQSPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K S D I +VD ++D + + + + K PI+L++NK D
Sbjct: 67 NKLGDYMLKTSESTLNEVDVITYIVDCSTTIGKLDSYIIKTLKEINIKTPIVLLINKIDE 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+ G + + +E Y E+IP+SA GV+D + + LP GP YYP+D+V++ P
Sbjct: 127 IQKGNLFELIEMYSNLNLFKEIIPISALKNDGVKDYIEVLRKYLPEGPQYYPEDLVTDQP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
E+F V E+IREK EVP+ V++ K R + I+ I +E+ S K I+IG
Sbjct: 187 EKFIVAELIREKALRNLSEEVPHGIAVSIEKMKYRENKEICDIEANIYIERESHKKIVIG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G +K + T AR++IE+ L +V L++ VKV++NWR+ E LK++GY
Sbjct: 247 KNGDMIKKIGTQARIEIENLLDYRVNLKLWVKVEKNWREKEIKLKNFGY 295
>gi|167765448|ref|ZP_02437561.1| hypothetical protein BACSTE_03838 [Bacteroides stercoris ATCC
43183]
gi|167697076|gb|EDS13655.1| ribosome biogenesis GTPase Era [Bacteroides stercoris ATCC 43183]
Length = 293
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 180/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG++ K
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVL-KPT 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+ SA +AD ++ + D + P++ ++ +E+ + ++P+LL++NK DL
Sbjct: 67 YKLQESMLNFSSSALTDADVLLYVTDVVETPDKHNDFVEKV---SRMEVPVLLLVNKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 SNQEKLVELVEAWKELLPNAEIIPISAATKFNVDYVMKRIKELLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEQFKEE-EKKIHINAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTIFLETFVKVDKDWRSSDKELRNFGY 290
>gi|189345893|ref|YP_001942422.1| GTP-binding protein Era [Chlorobium limicola DSM 245]
gi|189340040|gb|ACD89443.1| GTP-binding protein Era [Chlorobium limicola DSM 245]
Length = 305
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 172/294 (58%), Gaps = 8/294 (2%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
+ G+PN GKSTL N+++ KLSIVT KPQTTR +I GI Q+I DTPGI++ +
Sbjct: 13 IAGQPNAGKSTLLNKLLDYKLSIVTPKPQTTRKKITGIYHDNRRQIIFLDTPGIMQPQQK 72
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL---PILLVLNKK 232
+ +SM+ R+ AD + L+ K E D + + K P++ VLNK
Sbjct: 73 LHESMLAITRRTLE-EADVVTALIPYTKGSEPYDLDFTAELFNAWLKPAGKPVIAVLNKS 131
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D++ K + VI VSA G G+E + + + LP+ YP+D++S
Sbjct: 132 DIVSRAVQEKAESVMTQLFSPAAVISVSALEGTGLEKLVEALTPFLPMDEPLYPEDMLST 191
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIVVEKNSQK 348
PERFFV EIIREKIF+ Y EVPYA +V V +K + P+ KD I+ ++VE+++QK
Sbjct: 192 APERFFVSEIIREKIFLLYGKEVPYAAEVVVDEFKEQYENDPSRKDLIRCSVIVERDTQK 251
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIG G ALK L AAR DIE+ L + V+LE+ +KV+ +WR+ LLK YGY
Sbjct: 252 QILIGSQGNALKKLGKAARADIEEMLGRPVFLELFIKVRPDWRKKHNLLKSYGY 305
>gi|403743343|ref|ZP_10952957.1| GTP-binding protein Era [Alicyclobacillus hesperidum URH17-3-68]
gi|403122866|gb|EJY57058.1| GTP-binding protein Era [Alicyclobacillus hesperidum URH17-3-68]
Length = 297
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 173/295 (58%), Gaps = 9/295 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I++N+PQTTR+RI G+ + QMI DTPG+
Sbjct: 9 AIVGRPNVGKSTLLNALVGQKIAIMSNRPQTTRNRIRGVRTTETAQMIFIDTPGV-HTPH 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-EILE--EGVGDHKDKLPILLVLNK 231
H L +M+ D I+ +VD + EI++ EGV + P+ LV+NK
Sbjct: 68 HRLGEVMVDMALQTLGEVDLILFVVDVTSPVHAAEQEIIKQLEGV-----RTPVFLVINK 122
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + G I +++ ++ DE +P+SA + + I +LP GP YYP D+V+
Sbjct: 123 TDAVDKGLILERIAAFQALRSFDEYVPISALRQEQTDLLASLIEERLPEGPKYYPDDMVT 182
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
++PE F + EI+REK+ M R EVP++ V + + R + + I E++SQK IL
Sbjct: 183 DYPESFIISEIVREKVLMLTREEVPHSVMVAIEHMERRASDTLHVHATIYTERDSQKGIL 242
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQI 406
IGK G+ LK + AR ++E L ++YLE+ VKVK +WR LL+ +G+ G +
Sbjct: 243 IGKQGQMLKRVGEMARRELEGLLGNRIYLELWVKVKRDWRNRPALLRQFGFDGDV 297
>gi|406669572|ref|ZP_11076842.1| GTP-binding protein Era [Facklamia ignava CCUG 37419]
gi|405583268|gb|EKB57236.1| GTP-binding protein Era [Facklamia ignava CCUG 37419]
Length = 301
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 172/291 (59%), Gaps = 8/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+ +GQK++I+++KPQTTR+RI G+ + E Q+I DTPGI + K
Sbjct: 11 SIIGRPNVGKSTLINRFVGQKIAIMSDKPQTTRNRIQGVLTNEEGQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
H L M++ + D ++V+V+A + D + V DH L P LV+NK
Sbjct: 70 HALGDFMVQTALKSTRGVDGVLVVVNATEPIGPGDRV----VLDHVKLLDIPKFLVINKV 125
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DLI EI ++ Y + DEVIP+SA G+ + + D I++ LP GP YYP D V +
Sbjct: 126 DLIDQSEIFDIIKTYTDEYEFDEVIPISATEGYNTDILLDKIMSILPTGPQYYPADQVVD 185
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIIL 351
HPE F V E+IREK+ R E+P++ V V S + IQ I+VE+ SQK I+
Sbjct: 186 HPEYFIVQELIREKVLHLTREEIPHSVAVQVESMHRDVEDQSVEIQAVIIVERKSQKGII 245
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IG GK ++ + A DIE L K YLEI VKV+ +WR L YGY
Sbjct: 246 IGSQGKMIRNIRKRAEKDIEVLLGSKAYLEIWVKVQNSWRDRRHFLNEYGY 296
>gi|421491157|ref|ZP_15938524.1| GTP-binding protein Era [Streptococcus anginosus SK1138]
gi|400372154|gb|EJP25103.1| GTP-binding protein Era [Streptococcus anginosus SK1138]
Length = 299
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KSAKIPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVIIDSMKRDEETDKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|320527305|ref|ZP_08028490.1| GTP-binding protein Era [Solobacterium moorei F0204]
gi|320132329|gb|EFW24874.1| GTP-binding protein Era [Solobacterium moorei F0204]
Length = 297
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 174/290 (60%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++ G+PN GKSTL N +IG+K++IV++KPQTTR I GI + Q+I DTPGI + K
Sbjct: 7 ALAGRPNAGKSTLINSLIGEKVAIVSSKPQTTRSEIRGIYTDENCQIIFTDTPGIHKPKF 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L+S M K D I ++VDA + DE + V + LP+ LVLNK D
Sbjct: 67 R-LESRMNKEAADVIQGVDLIYLVVDASTPYAKGDEFVLNMVKNTG--LPVFLVLNKMDK 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++P +I K ++ +++ D E P+SAK+G ED+ LP G YP ++ S+
Sbjct: 124 MQPEKIVKVIQQWQERYDFAEYFPLSAKFGRSFEDLIKTTSKYLPEGDLLYPAEMTSDGA 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F + E+IREKI +Q +EVP+A V ++ K K +IQ I+VE++SQK I+IGK
Sbjct: 184 ENFRIAELIREKILIQTEDEVPHAAAV-LIENKEFKKDKVYIQAMILVERDSQKGIMIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
G+ LK + + AR DIE L KKV+LE+ V+V+ WR + + YGYGG
Sbjct: 243 QGQMLKKIGSLAREDIEKLLGKKVFLELFVRVENEWRSRDARITEYGYGG 292
>gi|374598815|ref|ZP_09671817.1| GTP-binding protein Era-like-protein [Myroides odoratus DSM 2801]
gi|423322993|ref|ZP_17300835.1| GTP-binding protein Era [Myroides odoratimimus CIP 103059]
gi|373910285|gb|EHQ42134.1| GTP-binding protein Era-like-protein [Myroides odoratus DSM 2801]
gi|404610014|gb|EKB09372.1| GTP-binding protein Era [Myroides odoratimimus CIP 103059]
Length = 295
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 180/291 (61%), Gaps = 9/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI + EYQ++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNEEEYQIVFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKLPILLVLNKK 232
+ L + MM V+SA +AD ++ +V+ + E+ +E + K+PILL+LNK
Sbjct: 68 YELQASMMDFVKSAFEDADVLIYMVEVGE-----KELKDEAFFNRIIHSKVPILLLLNKI 122
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D ++ +++E + E+ P+SA + + D IL +P P YY KD +++
Sbjct: 123 DKSNQVQLEEQVELWTSKVPNAEIFPISALEKFNTQAVFDRILELIPESPPYYAKDALTD 182
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
ERFFV EIIREKI + Y E+PYA +V + I+ I+VE+++QK ILI
Sbjct: 183 KSERFFVNEIIREKILLNYDKEIPYAVEVETEEFLEEEEIIR-IKAIIMVERDTQKGILI 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G ALK + AAR+++E F KKV+LE+ VKV ++WR + LK +GY
Sbjct: 242 GHKGAALKKVGIAARIEMEKFFDKKVHLELFVKVNKDWRSSDYQLKRFGYN 292
>gi|225182107|ref|ZP_03735535.1| GTP-binding protein Era [Dethiobacter alkaliphilus AHT 1]
gi|225167194|gb|EEG76017.1| GTP-binding protein Era [Dethiobacter alkaliphilus AHT 1]
Length = 302
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 176/302 (58%), Gaps = 6/302 (1%)
Query: 102 IEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 161
+ E Y +++G+PNVGKSTL N +G+K++I+++KPQTTR++I GI + +YQ
Sbjct: 1 MSEVVYMFRSGFIALIGRPNVGKSTLMNAFVGEKMAIISDKPQTTRNQIRGILTADDYQA 60
Query: 162 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 221
+ DTPGI + + + + M+ VR+ D I+ LVDA P D+ + + D +
Sbjct: 61 VFLDTPGIHKPQHKLGEKMVQVAVRTLQ-EVDLILFLVDAAAGPGAGDDYIIRQLSDVET 119
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
P++LV NK D LE Y +PVSA G E++ I+ LP G
Sbjct: 120 --PVILVANKADEAGMEAAQNVLEHYLPLYPFKAALPVSAITGINQEELLSLIVDSLPEG 177
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVE 339
P YYP+D++++ PER V E++REK+ R+E+P+A V ++S K R +D IQ
Sbjct: 178 PQYYPEDMITDQPERLIVAELVREKVLQLTRDEIPHAIAVEIISMKNR-AGRDLVDIQAN 236
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE++SQK I+IGK G LK + AR DIE L V+LE+ VKVK++WR EG ++
Sbjct: 237 IYVERDSQKGIVIGKRGALLKEVGKQARADIEALLGTPVFLELWVKVKKDWRNKEGTWQN 296
Query: 400 YG 401
+G
Sbjct: 297 FG 298
>gi|397904343|ref|ZP_10505260.1| GTP-binding protein Era [Caloramator australicus RC3]
gi|343179090|emb|CCC58159.1| GTP-binding protein Era [Caloramator australicus RC3]
Length = 296
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 172/289 (59%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +G+K+SI++NKPQTTR++I I + YQ+I DTPGI K
Sbjct: 10 TIIGRPNVGKSTLLNHYLGEKISIISNKPQTTRNKIQAIMTKDNYQIIFLDTPGI-HKPR 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L M+K + D ++ L++ + P D + + K PI+LV+NK D
Sbjct: 69 TRLGEYMVKVAKETLNEVDIVLFLINPSEKPNEGDLHIINQLSTVKT--PIILVINKVDT 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +AK ++ Y K D E++P+SA G + + + I++ LP GP Y+P D++++ P
Sbjct: 127 VSKEILAKTIDTYSKLYDFKEIVPISALKGDNTDRLLNIIVSLLPEGPQYFPADMITDQP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
E+F V EIIREK+ + EVP+ V V+S K I I EK + K I+IG
Sbjct: 187 EKFIVSEIIREKLLHNLKEEVPHGTAVEVISMKADDEKGIVNINATIYCEKETHKAIIIG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ G+ LK + T+AR++IE L KV+LE+ VKVK++WR +LK GY
Sbjct: 247 RNGQMLKKVGTSARVEIERLLGSKVFLELWVKVKKDWRDSPSVLKTLGY 295
>gi|423332768|ref|ZP_17310550.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
gi|337727886|emb|CCC02974.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
Length = 301
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 182/297 (61%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + PE Q+I D
Sbjct: 3 NPNYKSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI K L M K+ SA D ++ +V A + D+ + E + K PI
Sbjct: 63 TPGI-HKPSTKLGDFMEKSAMSALDEVDAVLFVVSATEKRGPGDDFIIERL--KKVNQPI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D I P ++ K ++ Y+ ++P+SA G+ V ++ + I+ LP GP YY
Sbjct: 120 FLVVNKIDQINPNDLPKIVDQYKDTLPFKGIVPISALQGNNVNNLINDIIKILPNGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D VS+HPERF + E+IREK+F+ R EVP++ V+V S K I I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLLTRQEVPHSVAVDVTSIKREDENHIHISANIIVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE L KV+L++ VKV +WR +LK YGY
Sbjct: 240 GQKGIIIGKGGKMLKKIGTMARQDIERLLGDKVFLQLWVKVVPDWRDKSAMLKDYGY 296
>gi|408411641|ref|ZP_11182779.1| GTP-binding protein Era [Lactobacillus sp. 66c]
gi|407874189|emb|CCK84585.1| GTP-binding protein Era [Lactobacillus sp. 66c]
Length = 303
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 173/296 (58%), Gaps = 12/296 (4%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q + DTPG
Sbjct: 9 HKSGFVALIGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKIFGIYTEDDMQAVFVDTPG 68
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD--HKDKLPIL 226
I K LD M K SA + D ++ +VDA KA + EE V ++P+
Sbjct: 69 IF-KSHSDLDEYMDKASLSALNDVDLVLFMVDAKKAGKG-----EEYVAGLLKNVEVPVF 122
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
LV+NK D + P ++ ++ Y+ D E +P+SA G+GV+D+ I LP GP YY
Sbjct: 123 LVINKIDQVHPNDLLPIIDSYQAVGDFAEFLPISASQGNGVDDLLKTIKDYLPEGPQYYA 182
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++ PE F V E+IRE+I EVP++ V V R K + I VEK+
Sbjct: 183 SDEVTDRPEYFVVAEMIREQILRLTGQEVPHSTAVWVEQMNERINGKLQVNATIYVEKDG 242
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGG +K + AR +IE L +KV L++ VKV+ NWRQD LK GY
Sbjct: 243 QKRIIIGKGGAMIKQIGMKARKEIESLLGEKVNLQLWVKVRHNWRQDPAFLKSIGY 298
>gi|119356257|ref|YP_910901.1| GTP-binding protein Era [Chlorobium phaeobacteroides DSM 266]
gi|119353606|gb|ABL64477.1| GTP-binding protein Era [Chlorobium phaeobacteroides DSM 266]
Length = 305
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 178/295 (60%), Gaps = 10/295 (3%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G PN GKSTL N+++ KLSIVT KPQTTR RI GI + Q+I DTPGI++ +
Sbjct: 13 IIGAPNAGKSTLLNKLLDYKLSIVTPKPQTTRKRITGIYHKDQCQIIFLDTPGIMKPQQK 72
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD---HKDKLPILLVLNKK 232
+ +SM+ + R+ +AD ++ L+ + +D E + + P++ VLNK
Sbjct: 73 LHESML-EITRATLKDADVVLALLPYSRQSGSVDLEFTEDLFSSWLNPSGKPVIAVLNKS 131
Query: 233 DLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
DL+ E + E + V+ +SA+ G+ +E + + LPL YP++ +S
Sbjct: 132 DLVS-AEAKRTCESVIQNSFHPKAVLSISAQLGNNIEGLISALKPFLPLKEPLYPEETLS 190
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIVVEKNSQ 347
PER FV EIIREKIF+ Y NE+PYA +V + +K + P+ KD I+ I+VE++SQ
Sbjct: 191 TDPERLFVTEIIREKIFLLYGNEIPYASEVIIDEFKEQHENDPSRKDLIRCSIIVERDSQ 250
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIG G ALK L AARLDIE+ L + V+LE+ +KV+ +WR+ LLK YGY
Sbjct: 251 KQILIGSKGAALKKLGQAARLDIEELLGRPVFLELFIKVRNDWRKKNNLLKSYGY 305
>gi|357008310|ref|ZP_09073309.1| GTPase Era [Paenibacillus elgii B69]
Length = 304
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI K
Sbjct: 17 AIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTDQAQIVFLDTPGI-HKPS 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L M+K A D I+ L+D + D + E + K K P++LV+NK D
Sbjct: 76 SKLGDYMIKAAEGALSEVDAILFLIDVVEGLGGGDRYIIETL--KKVKTPVILVMNKIDQ 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P + + Y+ E++P+SA +G+ V + + ++ LP GP YYP D V++HP
Sbjct: 134 IHPEALLSVITTYKDLYPFAEIVPISAMHGNNVNTLLEQVIKFLPEGPQYYPADQVTDHP 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E+IREKI R E+P++ V++ + I I VE++SQK I+IGK
Sbjct: 194 EQFVCAELIREKILHLTREEIPHSIAVSIEDMRVEANGVVHISAVIYVERDSQKGIIIGK 253
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L K +LE+ VKVK++WR + +L+ G+
Sbjct: 254 KGALLKEVGQKARADIEALLGSKTFLELWVKVKKDWRNQDRVLRDLGF 301
>gi|329962636|ref|ZP_08300584.1| ribosome biogenesis GTPase Era [Bacteroides fluxus YIT 12057]
gi|328529667|gb|EGF56565.1| ribosome biogenesis GTPase Era [Bacteroides fluxus YIT 12057]
Length = 305
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 183/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 20 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ ++ +E+ + ++P+LL++NK DL
Sbjct: 80 KLQESMLNFST-SALADADVLLYVTDVVETPDKHNDFVEKVA---RMEVPVLLLVNKIDL 135
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E +++ E+IP+SA V+ + + LP P Y+ KD ++ P
Sbjct: 136 SNQEKLVELVEAWKELLPKAEIIPISAATKFNVDYVMKRVKELLPDSPPYFDKDQWTDKP 195
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V+V +K K + I VE++SQK I+IGK
Sbjct: 196 ARFFVTEIIREKILLYYDKEIPYSVEVSVEQFKEE-AKKIHVSAVIYVERDSQKGIIIGK 254
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 255 QGKALKKVATEARRDLEKFFGKTIFLETFVKVDKDWRSSDKELRNFGY 302
>gi|239827759|ref|YP_002950383.1| GTP-binding protein Era [Geobacillus sp. WCH70]
gi|239808052|gb|ACS25117.1| GTP-binding protein Era [Geobacillus sp. WCH70]
Length = 302
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG+ + K
Sbjct: 12 SIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTPGMHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +++A + R D + E + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVALNALREVDLILFMINAEEGFGRGDAFIIEQL--KAVNTPVFLVINKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++ Y+ E+IP+SA G+ +E + + I LP GP YYP D +++HP
Sbjct: 129 VHPDDLLPLIDQYKDLYPFAEIIPISALQGNNIETLVEQIKKYLPEGPQYYPPDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF + E+IREK R EVP++ V V + + R + ++ I+VE++SQK I+IG
Sbjct: 189 ERFIIAELIREKALHLTREEVPHSIAVVVETIERREDSDTVYVGAVIIVERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR+DIE L KV+LE+ VKV+++WR L+ +G+
Sbjct: 249 KQGRMLKEIGQRARMDIEALLGSKVFLELWVKVQKDWRNRLAQLRDFGF 297
>gi|406025074|ref|YP_006705375.1| GTPase Era [Cardinium endosymbiont cEper1 of Encarsia pergandiella]
gi|404432673|emb|CCM09955.1| GTPase Era [Cardinium endosymbiont cEper1 of Encarsia pergandiella]
Length = 298
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 178/293 (60%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPN GKSTL N ++G++L++ +K QTTRH++ GI S ++Q+I DTPGII
Sbjct: 14 AIMGKPNAGKSTLMNLLVGERLAVTHSKAQTTRHKLYGIVSEKKFQIIYIDTPGIITPA- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + MM+ V+ A +AD I+ +VD D +L V +H K PI+LVLNK DL
Sbjct: 73 YPLQTAMMEAVKVARADADLIIWVVDVK------DLVLLPWVDEHYTKKPIILVLNKVDL 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + ++ ++P+SA ++ + I+ +LP P YYP++ +++ P
Sbjct: 127 VTANQLNVAIAYWRNHKPGVAIVPISALKKENIDLLLQQIIEQLPNHPPYYPEETLTDKP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERFFV EIIREKI QYR E+PY+ +V + +K I++ I VE+ +QK I+I
Sbjct: 187 ERFFVQEIIREKILDQYRQEIPYSVEVVIDHFK---ETDHLIKIRSIIHVERPTQKGIII 243
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G+ G AL L AAR +E F QK+++L + +KV NW + LLK +GY +
Sbjct: 244 GQKGDALTKLGIAAREALERFFQKQIFLALHIKVTPNWGKSRWLLKKFGYPAK 296
>gi|218288620|ref|ZP_03492897.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1]
gi|218241277|gb|EED08452.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1]
Length = 298
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 173/289 (59%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I++N+PQTTR+RI G+ + QMI DTPGI + K
Sbjct: 9 ALIGRPNVGKSTLLNALVGQKVAIMSNRPQTTRNRIRGVRTTETSQMIFIDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD- 233
H L M+ D IV++VDA +E + + + + + P++L LNK D
Sbjct: 68 HRLGEYMVDAALKTLNEVDVIVLVVDASSPVHPTEEEIAKQL--ERVRTPVILALNKVDA 125
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
L + K++E Y+ +E +P+SA G V+ + + I +LP GP YYP D++++
Sbjct: 126 LDDRALVLKRIEEYQALRPFEEYVPISALKGEQVDLLAELIERRLPEGPKYYPDDMITDQ 185
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE F + EI+REK+ M R+EVP++ V V + R + ++ I E+ SQK ILIG
Sbjct: 186 PESFIISEIVREKVLMLTRDEVPHSVMVAVEHMERRASDTLYVSAVIYTERESQKAILIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR ++E ++YLE+ VKVK +WR LL +G+
Sbjct: 246 KQGQMLKRVGELARHELEALFGNRIYLELWVKVKRDWRNKPALLHQFGF 294
>gi|270339920|ref|ZP_06006458.2| GTP-binding protein Era [Prevotella bergensis DSM 17361]
gi|270333271|gb|EFA44057.1| GTP-binding protein Era [Prevotella bergensis DSM 17361]
Length = 310
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 173/291 (59%), Gaps = 5/291 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + PE Q++ DTPG+++
Sbjct: 25 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTPEMQIVFSDTPGVLKPNY 84
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM+ SA +AD ++ + D + PE+ + L +P++L++NK D
Sbjct: 85 KM-QEMMLAFSESALSDADILLYVTDVVENPEKNMDFLNRV---KTMTIPVILLINKIDE 140
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +E + E++P+SAK G + + I LP PAY+ KD +++ P
Sbjct: 141 TDQQKLGDLVEKWHALLPNAEILPISAKNKFGTDILMKRIAELLPESPAYFDKDQLTDKP 200
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI Y E+PY+ +V V +K I I VE++SQK I+IG+
Sbjct: 201 ARFFVSEIIREKILRYYDKEIPYSVEVVVEQFK-EDERHVHINAVIYVERDSQKGIIIGR 259
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G ALK ++T AR +E F KK++LE+ VKV ++WR + L +GY Q
Sbjct: 260 QGMALKKVSTEARKSLEKFFDKKIFLEVFVKVDKDWRNSQRELNSFGYNPQ 310
>gi|222055248|ref|YP_002537610.1| GTP-binding protein Era [Geobacter daltonii FRC-32]
gi|259645945|sp|B9M913.1|ERA_GEOSF RecName: Full=GTPase Era
gi|221564537|gb|ACM20509.1| GTP-binding protein Era [Geobacter daltonii FRC-32]
Length = 297
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 173/293 (59%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H S++G+PNVGKSTL N+++G K+ I ++KPQTTR+RI GI + P Q++ DTPGI
Sbjct: 7 HSGFVSIIGRPNVGKSTLLNKILGDKIVITSDKPQTTRNRIQGIHNLPGCQIVFIDTPGI 66
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L+ M+ S+ D I+ LV+A P +E + + + P++LV+
Sbjct: 67 HRAK-SRLNKYMVDVALSSIKEVDVILFLVEADTKPANQEETILGALASAEA--PVVLVI 123
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK DL+ + +K+ Y EVIPVSA G + + LP GP Y+P DI
Sbjct: 124 NKVDLVAKESLLEKMAAYSGLYPFREVIPVSALTGDNTGRLVQVVRDLLPEGPPYFPDDI 183
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++ PERF V EI+REK+F +EVPY+ V V S+K R I I VE++SQK
Sbjct: 184 LTDVPERFVVAEIVREKVFRLTHDEVPYSVAVVVESFKERDDGLILISAVINVERDSQKG 243
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG+ G+ LK + AR +IE+ L +++LE+ V+V W +++ +LK +GY
Sbjct: 244 IIIGRKGEMLKKIGMQARREIEELLDTRIFLELFVRVSREWSENKQMLKEFGY 296
>gi|404330396|ref|ZP_10970844.1| GTPase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 301
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 172/289 (59%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ++GQK++I+++K QTTR++I GI + + Q+I DTPGI K
Sbjct: 11 AIVGRPNVGKSTLLNQVLGQKIAIMSDKAQTTRNKIHGIYTTDQEQIIFIDTPGI-HKPR 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L +M D ++ ++DA + R D+ + + + K P+ LV+NK D
Sbjct: 70 HRLGEVMTAMAIDTLNEVDLVLFMIDAVQGYGRGDQFIIDAL--KKSDTPVFLVVNKIDQ 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++ Y D E++PVSA V + + + LP GP YYP+D V++HP
Sbjct: 128 VHPDQLLPLIDKYRNLFDFAEIVPVSALRAQNVSTLLEQTASYLPEGPKYYPEDQVTDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IREKI +EVP++ V + K K +Q I+VE+ SQK I+IG
Sbjct: 188 ERFVISELIREKILQLTHDEVPHSIAVTIDQMKVDEQRNKAEVQATIIVERPSQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + T AR +IE K++LE+ VKV NWR + L+++GY
Sbjct: 248 KSGSMLKTIGTRARKEIETLTGDKIFLELWVKVDRNWRDKDEELRNFGY 296
>gi|212690522|ref|ZP_03298650.1| hypothetical protein BACDOR_00004 [Bacteroides dorei DSM 17855]
gi|212666871|gb|EEB27443.1| ribosome biogenesis GTPase Era [Bacteroides dorei DSM 17855]
Length = 293
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 181/290 (62%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPGVVKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA ++AD ++ + D + ++ + +E+ K+P+LL++NK DL
Sbjct: 68 KLQESMLNFS-ESALVDADILLYVTDVVEKTDKNVDFIEKV---RNVKVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ K +E W+E+ E+IP+SA V+ + I LP P Y+ KD ++
Sbjct: 124 TNQEDLVKLVEAWHEQLPQA-EIIPISATSKFNVDTVMKRIRELLPDSPPYFGKDQWTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
P RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ SQK I+I
Sbjct: 183 PARFFVTEIIREKILLYYDKEIPYSVEVVVEHFK--EDAKSIHINAVIYVERESQKGIII 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G+ALK +AT AR +E F QK +YLE VKV ++WR + LK++GY
Sbjct: 241 GKQGRALKKVATEARKTLEHFFQKSIYLETFVKVDKDWRSSDKELKNFGY 290
>gi|395240856|ref|ZP_10417880.1| GTP-binding protein Era [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475638|emb|CCI87857.1| GTP-binding protein Era [Lactobacillus gigeriorum CRBIP 24.85]
Length = 302
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 173/291 (59%), Gaps = 10/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I +NKPQTTR+RI GI S Q++ DTPGI K
Sbjct: 13 ALVGRPNVGKSTLMNRLVGQKVAITSNKPQTTRNRISGIYSSDNMQVVFVDTPGIF-KPH 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
LD+ M + S+ + D ++ +V+ A K I E+LE K K+P+ L++NK
Sbjct: 72 SELDNYMDRASLSSLNDVDLVLFMVEPEPAGKGDRYIAELLE------KVKVPVFLLINK 125
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + P ++ + ++ Y + D E +PVSA G G+ED+ + L +GP YY D V+
Sbjct: 126 VDRVYPDKLLEVIDSYRQLGDFTEFLPVSATEGIGIEDLLASLHKTLEIGPQYYSSDEVT 185
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ PE F V E+IRE+I EVP+A V V R K I+ I VE+ QK I+
Sbjct: 186 DRPEYFVVAELIREQILQLTSQEVPHATAVAVERMNQRVNGKLQIEATIYVERAGQKGII 245
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK GK LK + +R IE L +KV L++ VK+++NWR D LK GY
Sbjct: 246 IGKSGKMLKQIGINSRKQIESLLGEKVNLQLWVKLQKNWRSDPAFLKMIGY 296
>gi|410582647|ref|ZP_11319753.1| GTP-binding protein Era [Thermaerobacter subterraneus DSM 13965]
gi|410505467|gb|EKP94976.1| GTP-binding protein Era [Thermaerobacter subterraneus DSM 13965]
Length = 345
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 175/295 (59%), Gaps = 16/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IG+K++I+++KPQTTR RILG+ + P Q++ DTPGI K
Sbjct: 58 ALIGRPNVGKSTLLNQLIGRKIAIMSDKPQTTRTRILGVLNRPGAQLVFVDTPGI-HKPQ 116
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H+L M++ R + + LV+A P+R E G GD K P +L
Sbjct: 117 HLLGEHMVQIARRTLQEVEAVCWLVEA---PDR-----EPGPGDRFIAEQLAGLKTPRVL 168
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D + PGE+ + + V PVSA +G GV ++ + LP GP ++P+
Sbjct: 169 VVNKIDQVAPGEVPAIAARFAELGTFAAVHPVSALHGVGVAELVGTLEGLLPEGPRFFPE 228
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D+V++ PE + E+IRE+I R EVP+A V + + RP ++ I VE+ Q
Sbjct: 229 DMVTDQPEAQIMAELIREQILHLTREEVPHAVAVQIEKVERRPNGVVYVPATIYVEREGQ 288
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIG+ G+ LK + ARL+IE L ++YL++ VKVK +WR +G L ++G+
Sbjct: 289 KRILIGEQGRMLKEIGRLARLEIEALLGSRIYLDLWVKVKPDWRNKQGALSNFGF 343
>gi|256847126|ref|ZP_05552572.1| GTP-binding protein Era [Lactobacillus coleohominis 101-4-CHN]
gi|256715790|gb|EEU30765.1| GTP-binding protein Era [Lactobacillus coleohominis 101-4-CHN]
Length = 301
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 174/294 (59%), Gaps = 5/294 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + + Q++ DTPG+
Sbjct: 7 HSGFVALIGRPNVGKSTLLNYIVGQKVAIMSNVAQTTRNKIQGIYTTDDAQIVFIDTPGV 66
Query: 170 IEKKIHMLDSMMMKNVRS-AGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
+ + + D M + + A I+A VV D + P D+ + + D K PI LV
Sbjct: 67 HKPRTKLGDFMERSTMSALAEIDAVLYVVAADEKRGPG--DDYIINHLKDVKQ--PIYLV 122
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D + P E+ + Y+ +++PVSA G+ + + + ++ +LP+GP YYP D
Sbjct: 123 VNKIDTVHPNELPTIVGQYKDALPFKDIVPVSALQGNNINTLMNELVQELPVGPQYYPSD 182
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+S+HPERF + E+IREK+F R EVP++ ++V S K I I+VE+ QK
Sbjct: 183 QISDHPERFVIAEMIREKVFQLTREEVPHSVAIDVTSIKREDNETVHINANIIVERPGQK 242
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G+ LK + AR DIE L VYL++ VKV WR +LK YGY
Sbjct: 243 GIIIGKKGQMLKKIGQMARRDIEHLLGDHVYLQLWVKVVPGWRDKSAMLKDYGY 296
>gi|319939220|ref|ZP_08013583.1| GTP-binding protein Era [Streptococcus anginosus 1_2_62CV]
gi|319811616|gb|EFW07892.1| GTP-binding protein Era [Streptococcus anginosus 1_2_62CV]
Length = 299
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVSADENRGKGDDMIMERL--KVAKVPVVLVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVRIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|138896062|ref|YP_001126515.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2]
gi|134267575|gb|ABO67770.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2]
Length = 302
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + E Q+I DTPG+ + K
Sbjct: 12 AIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDEAQIIFIDTPGVHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +V+A + R + + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLNEVNT--PVFLVINKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++ Y+ E++P+SA G+ VE + + I +LP GP YYP D +++HP
Sbjct: 129 VHPDELLPIIDRYKDLYTFAEIVPISALEGNNVERLLEQIKQRLPEGPQYYPPDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNSQKIILIG 353
E+F + E+IREK R EVP++ V V + R T ++ IVVE++SQK I+IG
Sbjct: 189 EQFIIAELIREKALHLTREEVPHSIAVVVERIERREETGTVYVGAVIVVERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR DIE L +V+LE+ VKV+++WR L+ +G+
Sbjct: 249 KQGRMLKEIGQRARADIEALLGSRVFLELWVKVQKDWRNRLVQLRDFGF 297
>gi|258516219|ref|YP_003192441.1| GTP-binding protein Era [Desulfotomaculum acetoxidans DSM 771]
gi|257779924|gb|ACV63818.1| GTP-binding protein Era [Desulfotomaculum acetoxidans DSM 771]
Length = 300
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 175/291 (60%), Gaps = 9/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+MIG+K++I+++KPQTTRH+I + + YQ+I DTPGI + K
Sbjct: 13 AIIGRPNVGKSTLMNRMIGRKIAIMSDKPQTTRHKIYCVLTRDNYQVIFLDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPILLVLNK 231
H L ++ S D I+ LV+A C A +R ILE K K P+ LV+NK
Sbjct: 72 HKLGQHLVDTSLSTFGEVDLILFLVEANSFCGAGDRY--ILEHLA---KIKTPVFLVINK 126
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
DL+ ++ ++ EVIPVSA G V+ + I LP GP YYP D+++
Sbjct: 127 VDLVPKEQLLPLIDELHSKYKFQEVIPVSALNGDNVDRLERLIAGCLPPGPKYYPDDMLT 186
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ PE+F + E+IREKI E+P++ V V + RP ++ I VE++SQK I+
Sbjct: 187 DKPEQFIMAELIREKILHLTSQEIPHSVAVIVEQLEERPNNTLYVGALIYVERDSQKGII 246
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G+ LK + AR +IE L K++L+I VKV+E+WR E LK +GY
Sbjct: 247 IGKKGQMLKNIGQLARQEIEKLLGSKIFLDIRVKVREDWRNKESYLKAFGY 297
>gi|282860195|ref|ZP_06269269.1| GTP-binding protein Era [Prevotella bivia JCVIHMP010]
gi|424899683|ref|ZP_18323225.1| GTP-binding protein Era [Prevotella bivia DSM 20514]
gi|282587016|gb|EFB92247.1| GTP-binding protein Era [Prevotella bivia JCVIHMP010]
gi|388591883|gb|EIM32122.1| GTP-binding protein Era [Prevotella bivia DSM 20514]
Length = 293
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG++ K
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDAQIVFSDTPGVL-KPN 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + MM++ SA +AD ++ + D + PE+ + LE+ K ++P++L++NK D
Sbjct: 67 YKMQEMMLQFSESALADADVLLYVTDVVEKPEKNMDFLEKVA---KMQIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + +E + E++P+SA+ G++ + I LP PA++ KD +++ P
Sbjct: 124 SEQQKLGELVEKWHSLLPNAEILPISAQNKFGIDILLKRIYELLPESPAFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y E+PYA +V V +K + I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIIREKILRYYDKEIPYAVEVVVERFK-EDDKQIHINAVIYVERSSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ALK ++T AR +E F KK++LE VKV ++WR + L ++GY
Sbjct: 243 QGQALKKVSTEARKSLERFFDKKIFLETFVKVDKDWRNSQKELNNFGYN 291
>gi|288924557|ref|ZP_06418494.1| GTP-binding protein Era [Prevotella buccae D17]
gi|288338344|gb|EFC76693.1| GTP-binding protein Era [Prevotella buccae D17]
Length = 293
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 178/289 (61%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTEDTQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM+ SA +AD ++ + D + P + + L++ K +P+LL++NK D
Sbjct: 68 KM-QEMMLAFSESALADADVLLYVTDVVENPGKNVDFLDKV---KKMSIPVLLLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ +E + E++P+SAK GV+ + I LP PAY+ KD +++ P
Sbjct: 124 SDQKKLGDLVEKWHSLLPNAEILPISAKNKFGVDMLMRRIKELLPESPAYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EI+REKI + Y E+PY+ +V+V +K K I V I VE++SQK I+IG
Sbjct: 184 AKFFVSEIVREKILLYYDKEIPYSVEVSVERFK-EDEHKIHINVVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK +++ AR +E F KK++LE VKV ++WR + LKH+GY
Sbjct: 243 QGVALKKVSSEARKALEKFFDKKIFLETFVKVDKDWRSSQKELKHFGYN 291
>gi|218128436|ref|ZP_03457240.1| hypothetical protein BACEGG_00004 [Bacteroides eggerthii DSM 20697]
gi|329957357|ref|ZP_08297877.1| ribosome biogenesis GTPase Era [Bacteroides clarus YIT 12056]
gi|217989327|gb|EEC55640.1| ribosome biogenesis GTPase Era [Bacteroides eggerthii DSM 20697]
gi|328523070|gb|EGF50173.1| ribosome biogenesis GTPase Era [Bacteroides clarus YIT 12056]
Length = 293
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 180/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG++ K
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVL-KPT 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+ SA +AD ++ + D + P++ ++ +E+ H + +P+LL++NK DL
Sbjct: 67 YKLQESMLNFSTSALTDADVLLYVTDVVETPDKHNDFVEKV--SHME-VPVLLLVNKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 SNQEKLVELVEAWKELLPNAEIIPISAATKFNVDYVMKRIKELLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEQFKEE-EKKIHINAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTIFLETFVKVDKDWRSSDKELRNFGY 290
>gi|407452635|ref|YP_006724360.1| GTPase [Riemerella anatipestifer RA-CH-1]
gi|403313619|gb|AFR36460.1| GTPase [Riemerella anatipestifer RA-CH-1]
Length = 291
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 181/290 (62%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + P+ Q++ DTPG+++ K
Sbjct: 8 NIVGKPNAGKSTLLNQLMGEKLAIVTKKAQTTRHRIFGIYNEPDLQIVFSDTPGVLDPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDAC--KAPERIDEILEEGVGDHKDKLPILLVLNKK 232
+ L MM V+ + +AD + +VD AP E L E + +K +P+L+++NK
Sbjct: 67 YGLQEKMMDFVKDSLQDADVFLFIVDVTDKDAP---SEFLIEKL--NKIPVPVLILINKI 121
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D E+ K + ++ + E++P+SA G + I + + LP P YY K+ ++
Sbjct: 122 DQTNQEELEKLMHFWHEQIPKAEILPISALEGFNTDAILPKLKSLLPENPPYYDKEQFTD 181
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
ERFFV E IREKI + Y E+PY+ +V +K + FI I VE++SQK ILI
Sbjct: 182 KSERFFVNEAIREKILLNYEKEIPYSVEVVTEMFKEK-EGIIFIDSIIYVERDSQKGILI 240
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G+++K + T ARLD+E F KK++L + VKV+++WR++E LK +GY
Sbjct: 241 GHKGESIKKVGTQARLDLEKFFDKKIHLNLFVKVRKDWRKNERDLKSFGY 290
>gi|299822890|ref|ZP_07054776.1| GTP-binding protein Era [Listeria grayi DSM 20601]
gi|299816419|gb|EFI83657.1| GTP-binding protein Era [Listeria grayi DSM 20601]
Length = 301
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 177/289 (61%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKIAFNTFQEVDLIYFVIDASTGLGRGDEFIIEKLKNVDT--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P + + + Y + + E+IP+SA G+ V ++ L GP YYPKD +++HP
Sbjct: 128 ISPDALLELIASYREKMEFTEIIPISALQGNNVPNLLTETNEHLDEGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTIMATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE + KV+LEI VKV++NWR E L+ YG+
Sbjct: 248 KQGQMLKQIGMRARKEIELLMGSKVFLEIWVKVQKNWRDKERYLQDYGF 296
>gi|340346843|ref|ZP_08669962.1| GTP-binding protein Era [Prevotella dentalis DSM 3688]
gi|433652073|ref|YP_007278452.1| GTP-binding protein Era [Prevotella dentalis DSM 3688]
gi|339611060|gb|EGQ15900.1| GTP-binding protein Era [Prevotella dentalis DSM 3688]
gi|433302606|gb|AGB28422.1| GTP-binding protein Era [Prevotella dentalis DSM 3688]
Length = 293
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 175/291 (60%), Gaps = 5/291 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + P+ Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTPDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM+ SA +AD ++ + D + PE+ + L++ +P++L++NK D
Sbjct: 68 KM-QEMMLAFSESALADADILLYVTDVVENPEKNMDFLDKV---KSMTIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++ + E++P+SAK G + + I LP PAY+ KD +++ P
Sbjct: 124 SDQQKLVAAVDKWHSLLPNAEILPISAKNKFGTDMLMKRIAELLPESPAYFEKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y E+PYA +V V +K I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIIREKILRYYDKEIPYAVEVAVERFK-EDERHIHINTVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G ALK ++T AR +E F KK++LE+ VKV ++WR + L ++GY Q
Sbjct: 243 QGTALKKVSTEARKSLETFFGKKIFLEVFVKVDKDWRNSQKELNNFGYNPQ 293
>gi|116626742|ref|YP_828898.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076]
gi|116229904|gb|ABJ88613.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076]
Length = 304
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 169/284 (59%), Gaps = 5/284 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PN GKSTL N ++GQK++IV +KPQTTR I G+ + PE Q++ DTPGI K
Sbjct: 11 SLIGRPNAGKSTLLNALVGQKVAIVADKPQTTRTSIQGVLTLPEAQIVFADTPGI-HKAD 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L+ +M VR A D ++ + DA + D + HK P++LVLNK DL
Sbjct: 70 TPLNKRLMDTVRGALEERDLLLFVADATRKFNEDDRRAIDIARRHKT--PVVLVLNKIDL 127
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K + +E Y+ + E +PVS+ G++ +R IL LP+GPAY+P+D V++
Sbjct: 128 LKDKAHLLPLIEEYKAVFEFTEYVPVSSVKKIGLDQLRAVILKYLPVGPAYFPEDYVTDQ 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF E+IREK+ + R EVP+A V V ++ P I I +E++ QK I+IG
Sbjct: 188 PERFLAAELIREKVLLATRQEVPHAVAVTVDRWEETPKITR-IYATIHLERDGQKAIVIG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLL 397
GG LKL+ T AR ++E + K+YL++ V V+ WRQ+ L
Sbjct: 247 SGGSMLKLIGTQARHEMERLFEAKIYLDLHVHVQPGWRQNRAFL 290
>gi|258511948|ref|YP_003185382.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478674|gb|ACV58993.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 298
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 174/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I++N+PQTTR+RI G+ + QMI DTPGI + K
Sbjct: 9 ALIGRPNVGKSTLLNALVGQKVAIMSNRPQTTRNRIRGVRTTETSQMIFIDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ D IV++VDA ++ + + + + + P++L LNK D
Sbjct: 68 HRLGEYMVDAALKTLNEVDVIVLVVDASSPVHPTEQEIAKQL--ERVRTPVILALNKVDA 125
Query: 235 IKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ + K++E Y+ +E +P+SA G V+ + + I +LP GP YYP D++++
Sbjct: 126 LEDRALVLKRIEEYQALRPFEEYVPISALRGEQVDLLAEIIEKRLPEGPKYYPDDMITDQ 185
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE F + EI+REK+ M R+EVP++ V V + R + ++ I E+ SQK ILIG
Sbjct: 186 PESFIISEIVREKVLMLTRDEVPHSVMVAVEHMERRSSDTLYVSAVIYTERESQKAILIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR ++E ++YLE+ VKVK +WR LL +G+
Sbjct: 246 KQGQMLKRVGEMARHELEALFGNRIYLELWVKVKRDWRNKPALLHQFGF 294
>gi|206891076|ref|YP_002248190.1| GTP-binding protein Era [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206743014|gb|ACI22071.1| GTP-binding protein Era [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 289
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 178/291 (61%), Gaps = 11/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IG+K+SIVT KPQTTR+RI GI + P Q+I DTPGI K
Sbjct: 7 ALIGRPNVGKSTLINTVIGEKVSIVTEKPQTTRNRITGIKNLPNAQIIFIDTPGI-HKPR 65
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILLVLNKK 232
H L M+K + A D IV +V+ +AP DE+ + + KL P++L +NK
Sbjct: 66 HKLGEFMVKEAQEAMDMVDLIVFMVEP-EAPGN-DEL---SIIERLKKLNKPVILAINKI 120
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + + +E Y E+IP+SA G+E + + I+ LP P YP+D++++
Sbjct: 121 DTVAKQNLLPLIELYNDLHPFQEIIPISALKKDGIERLVERIIFYLPDSPILYPEDMLTD 180
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIIL 351
ERF V E IREKI +E+PY+ V++ ++ T K I I VE+ QKII+
Sbjct: 181 QAERFMVAEFIREKIMKYTHDEIPYSVAVDIERWEE--TEKLISIGANIYVEREGQKIII 238
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G+ LK +AT ARLDIE FL K++LE+ VKV++ WRQ + LLK GY
Sbjct: 239 IGKKGERLKKIATEARLDIEKFLGTKIFLEVWVKVRKKWRQKDMLLKSLGY 289
>gi|94970562|ref|YP_592610.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345]
gi|94552612|gb|ABF42536.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345]
Length = 324
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 178/296 (60%), Gaps = 5/296 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY-QMILYDTPGIIEKK 173
S++G+PN GKSTL N ++G+K++IVT+KPQTTR+RI GI + P+ Q++L DTPG+ K
Sbjct: 9 SIIGRPNAGKSTLLNALVGEKIAIVTHKPQTTRNRIQGIVTVPKKGQIVLVDTPGV-HKP 67
Query: 174 IHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
L+ MM+ V A D ++ + D E+ DE V K P++L+LNK D
Sbjct: 68 DKTLNKRMMQEVYDALEGCDLLLYIHDVTHKFEKEDEYTLSLV--KKTGQPVMLLLNKID 125
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
LI ++ + + + D E+IP+SA G G++ +R +L LP+GP Y+P D +++
Sbjct: 126 LIAKPKLLEIITQFSTLHDFKEIIPISAAKGSGLDILRKKVLQSLPVGPHYFPDDQITDQ 185
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF EIIRE++ + EVPYA V V ++ + + I I VE++ QK I+IG
Sbjct: 186 PERFLAAEIIREQVLVCAHQEVPYATTVMVEQWEEKRSLTK-IAAAIFVERDGQKAIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
+GG++LK + T AR ++E L KV+LE+ VKV+ WR + + Q++ L
Sbjct: 245 RGGESLKRIGTNARRELEKILNTKVFLELFVKVQAGWRDSRHFVDQLDWHRQLEEL 300
>gi|317475738|ref|ZP_07934997.1| GTP-binding protein Era [Bacteroides eggerthii 1_2_48FAA]
gi|316908121|gb|EFV29816.1| GTP-binding protein Era [Bacteroides eggerthii 1_2_48FAA]
Length = 293
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 180/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG++ K
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVL-KPT 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+ SA +AD ++ + D + P++ ++ +E+ H + +P+LL++NK DL
Sbjct: 67 YKLQESMLNFSTSALTDADVLLYVTDVVETPDKHNDFVEKV--SHME-VPVLLLVNKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 SNQEKLVELVEAWKELLPNAEIIPISAATKFNVDYVMKRIKELLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEQFKEE-EKKIHINAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTIFLETFVKVDKDWRSSDKELRNFGY 290
>gi|431737132|ref|ZP_19526088.1| GTPase Era [Enterococcus faecium E1972]
gi|430599508|gb|ELB37214.1| GTPase Era [Enterococcus faecium E1972]
Length = 299
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 188/296 (63%), Gaps = 7/296 (2%)
Query: 111 PNHKSV----LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P HKS +G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 226
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++HPE F V E+IREK+ R+EVP++ V V K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDLMKRNENDKIHIQATIIVERDS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR + L+ +GY
Sbjct: 239 QKGIIIGKGGKMLKQVGTKARKDIENLLGDKVFLELWVKVQKDWRDKKVYLQDFGY 294
>gi|193213385|ref|YP_001999338.1| GTP-binding protein Era [Chlorobaculum parvum NCIB 8327]
gi|193086862|gb|ACF12138.1| GTP-binding protein Era [Chlorobaculum parvum NCIB 8327]
Length = 305
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 188/301 (62%), Gaps = 16/301 (5%)
Query: 113 HKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEK 172
H + +G PN GKSTL N+++ KLSIVT KPQTTR +I GI Q+I+ DTPGI++
Sbjct: 10 HATFVGAPNAGKSTLLNRLLDHKLSIVTPKPQTTRKKITGIYHDDRSQIIILDTPGIMDP 69
Query: 173 KIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-----EILEEGVGDHKDKLPILL 227
K + +SM+ RS + D IV L+ K E D E++E+ V DK P ++
Sbjct: 70 KQSLHESMLEITRRSLR-DTDVIVALIPLQKGEEPFDRAFADELIEQWVRP-ADK-PFVI 126
Query: 228 VLNKKDLIKPGEIAKKL--EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LNK DL+ P E ++ E E++ + V +SA G ++++ D + LPL +
Sbjct: 127 ALNKADLV-PEETVHQVQNEIMERYHPI-AVPALSALTGSNIQELIDLLRPLLPLDEPIW 184
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIV 341
P DI+S PERFFVGEIIREKIF+Q+ E+PY+ +V + +K + P+ KD I+ I+
Sbjct: 185 PDDILSTEPERFFVGEIIREKIFLQFGREIPYSTEVVIDEFKEQHENDPSKKDLIRCSII 244
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
VE+NSQK I+IG+ G A+K L AAR +IE+ L + V+LEI VK++ +WR+ + LLK YG
Sbjct: 245 VERNSQKQIIIGQKGAAIKKLGQAARKEIEELLDRPVFLEIFVKIRPDWRKKKNLLKSYG 304
Query: 402 Y 402
Y
Sbjct: 305 Y 305
>gi|53715372|ref|YP_101364.1| GTP-binding protein Era [Bacteroides fragilis YCH46]
gi|52218237|dbj|BAD50830.1| putative GTP-binding protein [Bacteroides fragilis YCH46]
Length = 293
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 180/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +++ + PILL++NK DL
Sbjct: 68 KLQESMLNFST-SALADADVLLYVTDVIETPDKNNEFIQKV---RQQSAPILLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVKLVEGWKELLPQAEIIPISAATKFNVDYVMKRIKDLLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEEFK-EDAKKIHIHAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K V+LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTVFLETYVKVDKDWRSSDKELRNFGY 290
>gi|196248955|ref|ZP_03147655.1| GTP-binding protein Era [Geobacillus sp. G11MC16]
gi|196211831|gb|EDY06590.1| GTP-binding protein Era [Geobacillus sp. G11MC16]
Length = 302
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + E Q+I DTPG+ + K
Sbjct: 12 AIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDEAQIIFIDTPGVHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +V+A + R + + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLNEVNT--PVFLVINKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++ Y+ E++P+SA G+ VE + + I +LP GP YYP D +++HP
Sbjct: 129 VHPDELLPIIDRYKDLYPFAEIVPISALEGNNVERLLEQIKQRLPEGPQYYPPDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNSQKIILIG 353
E+F + E+IREK R EVP++ V V + R T ++ IVVE++SQK I+IG
Sbjct: 189 EQFIIAELIREKALHLTREEVPHSIAVVVERIERREETGTVYVGAVIVVERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR DIE L +V+LE+ VKV+++WR L+ +G+
Sbjct: 249 KQGRMLKEIGQRARADIEALLGSRVFLELWVKVQKDWRNRLVQLRDFGF 297
>gi|60683340|ref|YP_213484.1| GTP-binding protein Era [Bacteroides fragilis NCTC 9343]
gi|375360148|ref|YP_005112920.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis 638R]
gi|60494774|emb|CAH09580.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis NCTC 9343]
gi|301164829|emb|CBW24389.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis 638R]
Length = 305
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 180/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 20 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +++ + PILL++NK DL
Sbjct: 80 KLQESMLNFST-SALADADVLLYVTDVIETPDKNNEFIQKV---RQQSAPILLLINKIDL 135
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 136 TDQEKLVKLVEEWKELLPQAEIIPISAATKFNVDYVMKRIKDLLPDSPPYFDKDQWTDKP 195
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 196 ARFFVNEIIREKILLYYDKEIPYSVEVVVEEFK-EDAKKIHIHAVIYVERDSQKGIIIGK 254
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K V+LE VKV ++WR + L+++GY
Sbjct: 255 QGKALKKVATEARRDLERFFGKTVFLETYVKVDKDWRSSDKELRNFGY 302
>gi|281421767|ref|ZP_06252766.1| GTP-binding protein Era [Prevotella copri DSM 18205]
gi|281404262|gb|EFB34942.1| GTP-binding protein Era [Prevotella copri DSM 18205]
Length = 293
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM+ SA +AD ++ + D + PE+ E LE+ K ++P+LL++NK D
Sbjct: 68 KM-QEMMLAFSESALADADVLLYVTDVIENPEKNMEFLEKV---KKMQIPVLLLINKIDQ 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
P ++ +E + E++P+SAK G + + I LP PA++ KD +++ P
Sbjct: 124 SDPKKLGDIVEKWHSLLPNAEILPISAKNKFGTDMLLKRIKELLPESPAFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K + I I VE++SQK I+IG
Sbjct: 184 ARFFVSEIIREKILLYYDKEIPYSVEVRVERFK-EDEKRIHINAVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + T +R +E F KK++LE VKV ++WR + L +GY
Sbjct: 243 QGIALKKVNTESRKALEKFFDKKIFLETFVKVDKDWRSSQRELDAFGYN 291
>gi|194467792|ref|ZP_03073778.1| GTP-binding protein Era [Lactobacillus reuteri 100-23]
gi|194452645|gb|EDX41543.1| GTP-binding protein Era [Lactobacillus reuteri 100-23]
Length = 301
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 182/297 (61%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + PE Q+I D
Sbjct: 3 NPNYKSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI K L M K+ SA D ++ +V A + D+ + E + K PI
Sbjct: 63 TPGI-HKPSTKLGDFMEKSAMSALDEVDAVLFVVSATEKRGPGDDFIIERL--KKVNQPI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D I P ++ + ++ Y+ V+P+SA G+ V ++ + I+ LP GP YY
Sbjct: 120 FLVVNKIDQINPNDLPEIVDQYKDTLPFKGVVPISALQGNNVNNLINDIIKILPNGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D VS+HPERF + E+IREK+F+ R EVP++ V+V S K I I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLLTRQEVPHSVAVDVTSIKREDENHIHISANIIVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE L KV+L++ VKV +WR +LK YGY
Sbjct: 240 GQKGIIIGKGGKMLKKIGTMARQDIERLLGDKVFLQLWVKVVPDWRDKSAMLKDYGY 296
>gi|332638283|ref|ZP_08417146.1| GTPase Era [Weissella cibaria KACC 11862]
Length = 302
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + E Q++ DTPGI K
Sbjct: 12 ALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTDEGQIVFMDTPGI-HKPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K SA AD + LV+A + D+ + + D K P+ L++NK DL
Sbjct: 71 NSLGDFMVKTAMSALREADMVWFLVNADEPRGAGDDFIINRLKDTK--TPVYLIINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++ Y + + E+ P+SA G GV ++ D+ + K+ GP YYP D +++HP
Sbjct: 129 VNPADLLTIIDDYRQQMEFAEIFPISALKGDGVPELLDFAMDKMAEGPQYYPADQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + +Q IVVE+ +QK I+IGK
Sbjct: 189 ERFIMSELIREKVLQLTRQEVPHSVAVVIDKIERQDENHLHVQATIVVERPTQKNIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G +K + AR DIE L K++LE VKV+E WR L+ YGY
Sbjct: 249 QGAMIKEIGVRARKDIERLLGDKIFLETWVKVEERWRDKPQALQTYGY 296
>gi|114567081|ref|YP_754235.1| Era, Era/TrmE family GTP-binding protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114338016|gb|ABI68864.1| GTP-binding protein Era, Era/TrmE family [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 293
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N +IG+K++IV+ KPQTTR RI GI + Q+I DTPGI + K
Sbjct: 7 SIVGRPNVGKSTLLNTIIGEKIAIVSEKPQTTRTRIQGIYTCERGQVIFVDTPGIHKPK- 65
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H+L M+K + D I + D + + + E + D + +P+ L++NK DL
Sbjct: 66 HLLGEYMVKVSARSLEEVDIIYYMTDVTRPFGGGESFILEQLKDAR--VPVFLLVNKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ E+ ++ + + EV+ +SA G ++ + D L LP GP YYP+D +++ P
Sbjct: 124 VSEQEVKDYIQIFNQQRSFSEVVSISAACGTNLQLLIDKTLDALPEGPLYYPEDDLTDQP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+ E+IREK M R+EVP++ V V +K + K +++ I +E++SQK ILIGK
Sbjct: 184 IYLLIAELIREKALMLTRDEVPHSLAVEVEEFKKQSNGKVYVRAAIYMERDSQKGILIGK 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+ LK + AR DIE L VYL++ VKVK+NWR +EG L GY
Sbjct: 244 KGQMLKTIGEQARQDIESLLDTAVYLDLWVKVKKNWRDNEGTLNQLGY 291
>gi|374710514|ref|ZP_09714948.1| GTP-binding protein [Sporolactobacillus inulinus CASD]
Length = 301
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 178/292 (60%), Gaps = 4/292 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + Q++ DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNRVLGQKIAIMSDKAQTTRNKIHGIYTTDSEQVVFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L +M + D ++ L+DA + R D+ + + + K +P+ L++NK D
Sbjct: 70 HKLGQVMTSLALATLNEVDLVLFLIDAEQGYGRGDQFIIDFL--KKTTVPVFLIVNKIDK 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++ Y E+IP+SA G V + D I LP GP YYP+D +++HP
Sbjct: 128 VHPDALLPLIDRYRSLYSFKEIIPISALQGQNVTTLMDQIGQVLPEGPKYYPEDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI R+EVP+A V + K + IQ I+VE++SQK I+IG
Sbjct: 188 ERFVVAELIREKILHLTRDEVPHAIAVIIDKMKEDDERQLTEIQATIMVERSSQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
+ G LK + T AR +IE + +V+LE+ VKV +NWR E LK++GY Q
Sbjct: 248 RSGSMLKKIGTLARKEIEALIGSRVFLELWVKVDKNWRDKEEELKNFGYTIQ 299
>gi|342217317|ref|ZP_08709964.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341588207|gb|EGS31607.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 295
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 177/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+KLSI +NKPQTTR++I I + E Q+I DTPGI +K
Sbjct: 7 TIIGRPNVGKSTLINRIVGEKLSITSNKPQTTRNKIQLIHTTEEAQIIFMDTPGI-QKPK 65
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + M+ R D I +VDA K +D+ + + + K K PILL++NK D
Sbjct: 66 NKLGTYMLGVSRETLGEVDVITAMVDASKKIGAMDQWIFKELEGFKGKTPILLLINKIDE 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I +I ++ Y K +E+IP+SA G +E+ + LP GP Y+P D++++ P
Sbjct: 126 IPKPDILPLIDQYAKLNLFEEIIPISAINGDNIEEYLSALEGFLPEGPQYFPDDMITDQP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
E+F V E IREK + EVP+ V V S K R K+ + +E I VE+ S K I+I
Sbjct: 186 EKFIVAEFIREKALENLQEEVPHGVMVVVESMKMREN-KNLMDIEATIFVERKSHKGIII 244
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + +++RLD+E L K+ L++ VKV ++WR+ E ++ +GY
Sbjct: 245 GKSGSMLKKIGSSSRLDLERLLDTKINLQLWVKVSKDWREKENQVERFGY 294
>gi|51891672|ref|YP_074363.1| Era family GTP-binding protein [Symbiobacterium thermophilum IAM
14863]
gi|51855361|dbj|BAD39519.1| Era family GTP-binding protein [Symbiobacterium thermophilum IAM
14863]
Length = 316
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 173/311 (55%), Gaps = 32/311 (10%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N + KL+I+++KPQTTR+RILG+ + P+ Q++ DTPGI K
Sbjct: 12 SIVGRPNVGKSTLLNAFVAAKLAIMSDKPQTTRNRILGVYNRPDAQVVFLDTPGI-HKPR 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L M K D ++ +VD + E G GD + P +L
Sbjct: 71 HRLGEYMNKVAIGTIPEVDVVLFVVDGS--------VPEPGEGDRYVADVVARSGRPAIL 122
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVD----------------EVIPVSAKYGHGVEDIR 271
V+NK D +K G+ ++ Y+ + +++PVSA ++ +
Sbjct: 123 VVNKMDRVKRGDWYAVMDAYKALAQPEARSENPDPGAPTIEWIDIVPVSALEHKNIDALL 182
Query: 272 DWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT 331
D I+ ++ GP YYP+D++++ PERF + E IREKI R+EVP++ V V + RPT
Sbjct: 183 DLIVQQMEEGPKYYPEDMITDQPERFVIAEFIREKILQLTRDEVPHSVAVEVEELQRRPT 242
Query: 332 AKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWR 391
++ I VE+ SQK I+IGK G LK + AR DIE L K+YLE+ VKVKE+WR
Sbjct: 243 GTVYVSASIYVERESQKGIIIGKRGAMLKEIGARARQDIEQMLGSKIYLELFVKVKEDWR 302
Query: 392 QDEGLLKHYGY 402
E +L+ GY
Sbjct: 303 NKESVLRSLGY 313
>gi|334133801|ref|ZP_08507343.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF7]
gi|333608650|gb|EGL19940.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF7]
Length = 299
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 170/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + Q++ DTPGI K
Sbjct: 12 SIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTDNSQIVFLDTPGI-HKPS 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L MMK S D I+ L D + D + E + + K P++LVLNK D
Sbjct: 71 SKLGDYMMKVAHSTLGEVDAILFLADVSEGIGGGDRYIIEQLKNVKT--PVILVLNKIDQ 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + Y+ + E++PVSA G+ V + + ++ LP GP YYP D +++HP
Sbjct: 129 VHPEQLLPIITTYKDLYEFAEIVPVSALLGNNVNTMLEQVVKYLPEGPQYYPADQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+F E++REKI R E+P++ V + K I I VE++SQK I+IGK
Sbjct: 189 EQFVCAELVREKILHMTREEIPHSIAVAIEDMKVEKNGVVHISAVIYVERDSQKGIIIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L K +LE+ VKVK++WR E +L+ G+
Sbjct: 249 QGSLLKEIGKQARHDIEALLGSKTFLELWVKVKKDWRNQERVLRDLGF 296
>gi|257869127|ref|ZP_05648780.1| GTP-binding protein Era [Enterococcus gallinarum EG2]
gi|357050006|ref|ZP_09111220.1| GTP-binding protein era [Enterococcus saccharolyticus 30_1]
gi|257803291|gb|EEV32113.1| GTP-binding protein Era [Enterococcus gallinarum EG2]
gi|355382489|gb|EHG29587.1| GTP-binding protein era [Enterococcus saccharolyticus 30_1]
Length = 299
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 186/302 (61%), Gaps = 21/302 (6%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + P+ Q++ DTP
Sbjct: 3 THKSGFAAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTPDAQIVFIDTP 62
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HK 220
GI + K H L M++ SA D + ++ A ++ G GD K
Sbjct: 63 GIHKPK-HRLGDFMVETAYSALREVDVTLFMI---SADQK------RGKGDDFIIERLRK 112
Query: 221 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
++ P+ LV+NK D + P E+ +E Y E++P+SA G+ E + ++ ++P
Sbjct: 113 NETPVFLVINKIDKVHPDELLAIIEDYAAQMTFAEIVPISATEGNNFETLMRLVIDQMPE 172
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP Y+P+D +++HPE F V E++REK+ + R+EVP++ V V S K K IQ I
Sbjct: 173 GPQYFPEDQITDHPEYFIVSELVREKVLLLTRDEVPHSVAVVVDSMKRDENDKIHIQATI 232
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
VVE++SQK I+IGKGGK LK + T ARLDIE L KVYLE+ VKV+++WR + L Y
Sbjct: 233 VVERDSQKGIIIGKGGKMLKQIGTKARLDIEHLLDDKVYLELWVKVQKDWRDKQTFLTDY 292
Query: 401 GY 402
GY
Sbjct: 293 GY 294
>gi|325268711|ref|ZP_08135340.1| GTP-binding protein Era [Prevotella multiformis DSM 16608]
gi|324988955|gb|EGC20909.1| GTP-binding protein Era [Prevotella multiformis DSM 16608]
Length = 293
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 178/290 (61%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDAQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADVLLYVTDVIENPEKNMDFLEKVA---KMTIPVILLINKIDE 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ + +E W+ D E++P+SAK G + + + LP PA++ KD +++
Sbjct: 124 SDQSKLVELVEKWHSLLPDA-EILPISAKNKFGTDILMKRVRELLPESPAFFDKDQLTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
P RFFV EIIREKI Y E+PY+ +V V +K + I I VE++SQK I+IG
Sbjct: 183 PARFFVSEIIREKILRYYDKEIPYSVEVVVERFK-EDDRQIHINAVIYVERSSQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KK++LE VKV ++WR + L ++GY
Sbjct: 242 HQGMALKKMSTEARKSLERFFDKKIFLETFVKVDKDWRNSQKELNNFGYN 291
>gi|265767859|ref|ZP_06095391.1| GTP-binding protein Era [Bacteroides sp. 2_1_16]
gi|336412106|ref|ZP_08592564.1| GTP-binding protein Era [Bacteroides sp. 2_1_56FAA]
gi|383119925|ref|ZP_09940662.1| GTP-binding protein Era [Bacteroides sp. 3_2_5]
gi|423252219|ref|ZP_17233221.1| GTP-binding protein Era [Bacteroides fragilis CL03T00C08]
gi|423252539|ref|ZP_17233470.1| GTP-binding protein Era [Bacteroides fragilis CL03T12C07]
gi|423261233|ref|ZP_17242134.1| GTP-binding protein Era [Bacteroides fragilis CL07T00C01]
gi|423267758|ref|ZP_17246738.1| GTP-binding protein Era [Bacteroides fragilis CL07T12C05]
gi|423272333|ref|ZP_17251301.1| GTP-binding protein Era [Bacteroides fragilis CL05T00C42]
gi|423276789|ref|ZP_17255721.1| GTP-binding protein Era [Bacteroides fragilis CL05T12C13]
gi|423283045|ref|ZP_17261930.1| GTP-binding protein Era [Bacteroides fragilis HMW 615]
gi|251944092|gb|EES84611.1| GTP-binding protein Era [Bacteroides sp. 3_2_5]
gi|263252531|gb|EEZ24059.1| GTP-binding protein Era [Bacteroides sp. 2_1_16]
gi|335939278|gb|EGN01155.1| GTP-binding protein Era [Bacteroides sp. 2_1_56FAA]
gi|387774385|gb|EIK36497.1| GTP-binding protein Era [Bacteroides fragilis CL07T00C01]
gi|392647831|gb|EIY41528.1| GTP-binding protein Era [Bacteroides fragilis CL03T00C08]
gi|392660615|gb|EIY54224.1| GTP-binding protein Era [Bacteroides fragilis CL03T12C07]
gi|392695525|gb|EIY88737.1| GTP-binding protein Era [Bacteroides fragilis CL05T00C42]
gi|392696001|gb|EIY89205.1| GTP-binding protein Era [Bacteroides fragilis CL05T12C13]
gi|392696017|gb|EIY89219.1| GTP-binding protein Era [Bacteroides fragilis CL07T12C05]
gi|404581319|gb|EKA86018.1| GTP-binding protein Era [Bacteroides fragilis HMW 615]
Length = 293
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 180/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +++ + PILL++NK DL
Sbjct: 68 KLQESMLNFST-SALADADVLLYVTDVIETPDKNNEFIQKV---RQQSAPILLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVKLVEEWKELLPQAEIIPISAATKFNVDYVMKRIKDLLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEEFK-EDAKKIHIHAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K V+LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTVFLETYVKVDKDWRSSDKELRNFGY 290
>gi|262273709|ref|ZP_06051522.1| GTP-binding protein Era [Grimontia hollisae CIP 101886]
gi|262222124|gb|EEY73436.1| GTP-binding protein Era [Grimontia hollisae CIP 101886]
Length = 304
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 178/297 (59%), Gaps = 5/297 (1%)
Query: 108 ASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
H +++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ + DTP
Sbjct: 7 TRHCGFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVYVDTP 66
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
G+ ++ ++ +M + S+ + + ++ LVD + + +L + K +LP +L
Sbjct: 67 GLHIEEKRTINRLMNRAASSSLTDVELVLFLVDGTHWTQDDEMVLNKL---KKAQLPTVL 123
Query: 228 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
++NK D +K GE+ L+ + D +V+PVSAK+G ++ + + LP G Y+P
Sbjct: 124 LVNKVDNVKEKGELFPHLQEISQKMDFIDVVPVSAKHGTNIDVVEKLVRKHLPEGEWYFP 183
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKN 345
++ V++ +RF EIIREK+ +E+PY+ V + + P F I I+VE+N
Sbjct: 184 EEYVTDRSQRFMASEIIREKLMRFTGDELPYSVTVEIERFDYNPETDGFEINGLILVERN 243
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK ++IGKGG +K + ARLD+E+ ++KVYLE+ VKVK W DE L+ GY
Sbjct: 244 GQKRMVIGKGGDKIKTIGREARLDMEELFERKVYLELWVKVKSGWADDERALRSLGY 300
>gi|418962197|ref|ZP_13514072.1| GTP-binding protein Era [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383346255|gb|EID24316.1| GTP-binding protein Era [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 299
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVSADEKRGKGDDMIMERL--KVAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ Y K D EV+P+S G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPNQLLSQIDDYRKQMDFKEVVPISVLQGNNVSHLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE +KVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSLARRDIELMLGDKVFLETWIKVKKNWRDKKLDLADFGY 294
>gi|376260938|ref|YP_005147658.1| GTP-binding protein Era [Clostridium sp. BNL1100]
gi|373944932|gb|AEY65853.1| GTP-binding protein Era [Clostridium sp. BNL1100]
Length = 298
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 176/290 (60%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PNVGKSTL N + GQK++I+++KPQTTR+ I G+ + E Q+IL DTPGI + K
Sbjct: 9 SVIGRPNVGKSTLLNTITGQKIAIMSDKPQTTRNTIRGVITNKECQLILIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERID-EILEEGVGDHKDKLPILLVLNKK 232
+ + M+ NV S I D ++ LV+A P D I+++ + K P+ L+LNK
Sbjct: 69 KLGEYMV--NVASETIKEVDLVLFLVEANAQPGAQDINIIQQL---KQVKTPVFLILNKV 123
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DLI ++ ++ Y K D +IP+SA G++ I L +P GP ++ +D++++
Sbjct: 124 DLISKDKLLAIIDSYSKLMDFKAIIPISALKNDGIDIILKEALDYIPEGPQFFSEDMLTD 183
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PE+ E+IREK+ + +EVP+ V V S+K R IQ I EK+S K I+I
Sbjct: 184 QPEKVIAAEMIREKVLLNLDDEVPHGVGVEVTSFKEREDGLINIQATIYCEKSSHKGIII 243
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + +AAR +IE L K++LE+ VKVK +WR + +LK GY
Sbjct: 244 GKQGNMLKKIGSAARYEIERLLDTKIFLELWVKVKPDWRNSDNMLKTLGY 293
>gi|148543969|ref|YP_001271339.1| GTP-binding protein Era [Lactobacillus reuteri DSM 20016]
gi|184153364|ref|YP_001841705.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
gi|227364882|ref|ZP_03848928.1| GTP-binding protein Era [Lactobacillus reuteri MM2-3]
gi|325682493|ref|ZP_08162010.1| GTP-binding protein Era [Lactobacillus reuteri MM4-1A]
gi|148531003|gb|ABQ83002.1| GTP-binding protein Era [Lactobacillus reuteri DSM 20016]
gi|183224708|dbj|BAG25225.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
gi|227070086|gb|EEI08463.1| GTP-binding protein Era [Lactobacillus reuteri MM2-3]
gi|324978332|gb|EGC15282.1| GTP-binding protein Era [Lactobacillus reuteri MM4-1A]
Length = 301
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 182/297 (61%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + PE Q+I D
Sbjct: 3 NPNYKSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI K L M K+ SA D ++ +V A + D+ + E + K PI
Sbjct: 63 TPGI-HKPSTKLGDFMEKSAMSALDEVDAVLFVVSATEKRGPGDDFIIERL--KKVNQPI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D I P ++ + ++ Y+ ++P+SA G+ V ++ + I+ LP GP YY
Sbjct: 120 FLVVNKIDQINPNDLPEIVDQYKDTLPFKGIVPISALQGNNVNNLINDIIKILPNGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D VS+HPERF + E+IREK+F+ R EVP++ V+V S K I I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLLTRQEVPHSVAVDVTSIKREDENHIHISANIIVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE L KV+L++ VKV +WR +LK YGY
Sbjct: 240 GQKGIIIGKGGKMLKKIGTMARQDIERLLGDKVFLQLWVKVVPDWRDKSAMLKDYGY 296
>gi|227544911|ref|ZP_03974960.1| GTP-binding protein Era [Lactobacillus reuteri CF48-3A]
gi|338204345|ref|YP_004650490.1| GTP-binding protein Era [Lactobacillus reuteri SD2112]
gi|227185123|gb|EEI65194.1| GTP-binding protein Era [Lactobacillus reuteri CF48-3A]
gi|336449585|gb|AEI58200.1| GTP-binding protein Era [Lactobacillus reuteri SD2112]
Length = 301
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 182/297 (61%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + PE Q+I D
Sbjct: 3 NPNYKSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI K L M K+ SA D ++ +V A + D+ + E + K PI
Sbjct: 63 TPGI-HKPSTKLGDFMEKSAMSALDEVDAVLFVVSATEKRGPGDDFIIERL--KKVNQPI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D I P ++ + ++ Y+ ++P+SA G+ V ++ + I+ LP GP YY
Sbjct: 120 FLVVNKIDQINPNDLPEIVDQYKDTLPFKGIVPISALQGNNVNNLINDIIKILPNGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D VS+HPERF + E+IREK+F+ R EVP++ V+V S K I I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLLTRQEVPHSVAVDVTSIKREDENHIHISANIIVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGGK LK + T AR DIE L KV+L++ VKV +WR +LK YGY
Sbjct: 240 GQKGIIIGKGGKMLKKIGTMARQDIEKLLGDKVFLQLWVKVVPDWRDKSAMLKDYGY 296
>gi|375013474|ref|YP_004990462.1| GTP-binding protein Era [Owenweeksia hongkongensis DSM 17368]
gi|359349398|gb|AEV33817.1| GTP-binding protein Era [Owenweeksia hongkongensis DSM 17368]
Length = 291
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 179/295 (60%), Gaps = 11/295 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N +G+ LSI+T K QTTRHRILG+ + YQ++ DTPG
Sbjct: 2 HKSGYVNIIGNPNVGKSTLMNSFLGEDLSIMTPKAQTTRHRILGLLNDENYQIVFSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
II+ + L MM V+S +AD + L + + P + + L++ K+P+LL+
Sbjct: 62 IIQPG-YALQEHMMDFVQSTFEDADIFLFLTEPTEKPIKDERFLQKL---QNTKVPVLLI 117
Query: 229 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK DL + K + W E+ + E+ P+SA E + D IL LP GPAY+ K
Sbjct: 118 INKIDLTDQQTLEKVVAHWGEQLPNA-EIYPISALNDFNTEVLLDRILELLPEGPAYFSK 176
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
+ +S+ ERFFV E+IRE++ Y E+PYA QV V +K I+ I VE+++Q
Sbjct: 177 EELSDKDERFFVSEMIREQMLKIYSKEIPYAVQVEVEEFKEEEKIIR-IRSIIYVERDTQ 235
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IG GK +K T AR+ +E F +KKV+LE+ VKV++NWRQ E LK +GY
Sbjct: 236 KSIVIGHQGKMIKRTGTDARIRMEAFFKKKVFLELFVKVRKNWRQSEDQLKRFGY 290
>gi|309800252|ref|ZP_07694428.1| GTP-binding protein Era [Streptococcus infantis SK1302]
gi|308116105|gb|EFO53605.1| GTP-binding protein Era [Streptococcus infantis SK1302]
Length = 299
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVIFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|255535475|ref|YP_003095846.1| GTP-binding protein Era [Flavobacteriaceae bacterium 3519-10]
gi|255341671|gb|ACU07784.1| GTP-binding protein Era [Flavobacteriaceae bacterium 3519-10]
Length = 291
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 184/289 (63%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL NQ++G+KL+IVT K QTTRHRI GI + + Q++ DTPG+++ K
Sbjct: 8 NIVGKPNVGKSTLLNQLMGEKLAIVTQKAQTTRHRIFGIYNEEDLQIVFSDTPGVLDPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+ + +AD + +VD E + ++++ +K +P+L+++NK D
Sbjct: 67 YGLQERMMDFVKDSLQDADVFLFIVDILDKSEPFEYLVDKL---NKIPVPVLILVNKIDE 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ K +E W+E+ E++P+SA G E I + + LP P YY K++ ++
Sbjct: 124 SNQEDLEKVMELWHERIPKA-EILPISALKGFNTEIILPKLKSLLPENPPYYDKEMYTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERFFV E IREKI + Y E+PY+ +V +K FI I VE+++QK I+IG
Sbjct: 183 PERFFVNEAIREKILLNYEKEIPYSVEVVTEMFKEN-EGIIFIDSVIYVERDTQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+A+K + AR+D+E F KK++L + VKVK++WR+++ LK++GY
Sbjct: 242 HKGEAIKKVGIEARIDLEKFFSKKIHLNLFVKVKKDWRKNDRDLKNFGY 290
>gi|372209537|ref|ZP_09497339.1| GTPase Era [Flavobacteriaceae bacterium S85]
Length = 293
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 176/288 (61%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI + +Q++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNDEHHQILFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + + MM V+SA +AD ++ +V+ + E DE E + K P+LL++NK D
Sbjct: 68 YEMQASMMDFVKSAFEDADVLIYMVEIGEK-ELKDEAFFEKIKS--SKAPVLLLINKIDT 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+I +K+++++ V +SA + + D I LP P +YPKD +++ P
Sbjct: 125 SNQEQIEEKMQYWQSKVPNANVYLISALEKFNILPVFDKIKELLPESPPFYPKDQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI + Y+ E+PYA ++ + I+ I+VE+ +QK I+IG
Sbjct: 185 ERFFVNEAIREKILLNYKKEIPYAVEI-LTEEFFEEDEIIRIRAIIMVERETQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK + AR D+E F KK++L++ VKV +NWR ++ LK +GY
Sbjct: 244 KGAALKKVGMDARKDLEAFFGKKIFLDLYVKVNKNWRSNDRQLKRFGY 291
>gi|338813214|ref|ZP_08625348.1| GTP-binding protein Era [Acetonema longum DSM 6540]
gi|337274821|gb|EGO63324.1| GTP-binding protein Era [Acetonema longum DSM 6540]
Length = 302
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IGQK++I+++KPQTTR++IL + + P+ Q++ DTPGI + K
Sbjct: 17 AVVGRPNVGKSTLVNSLIGQKIAIMSDKPQTTRNKILCVLTQPDAQILFIDTPGIHKPK- 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M++ S D I+ +VDA + ++ + E + P++L +NK DL
Sbjct: 76 HKLGEYMVRASESTLREVDVILFVVDATQKMGAGEQYILERIA--AVNTPVILAINKIDL 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ +E Y + V+P+SA + + I L GP YYP+D+V++ P
Sbjct: 134 VSRTDLLPVIETYNTAHSFNAVVPISALNRDNLPGLIGEIKKYLEAGPQYYPEDMVTDQP 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + E+IREK+ R E+P+A V++ TR +++ I VE+ SQK I+IG
Sbjct: 194 ERLVMAELIREKVLHMTREEIPHAIAVDMEEITTRNNGDLYVRAVIYVERESQKGIVIGH 253
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + AAR DIE L KV++++ VKVK++WR EG+L+ +GY
Sbjct: 254 GGGLLKEIGKAAREDIEKLLGSKVFIDLWVKVKKDWRNKEGVLREFGY 301
>gi|56459917|ref|YP_155198.1| GTPase Era [Idiomarina loihiensis L2TR]
gi|56178927|gb|AAV81649.1| GTPase Era [Idiomarina loihiensis L2TR]
Length = 305
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 176/300 (58%), Gaps = 4/300 (1%)
Query: 104 EFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 163
E D H +++G+PNVGKSTL N+++GQK+SI +NKPQTTRHRILG+ + Q I
Sbjct: 6 ELDENKHSGFVAIVGRPNVGKSTLINRLLGQKISITSNKPQTTRHRILGVDTDDGCQAIY 65
Query: 164 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 223
DTPG+ +++ ++ +M + SA + D ++ +V+ K E +LE+ + K+
Sbjct: 66 VDTPGMHKQEPRAINRVMNQTASSALKDVDLVLFVVENLKWLEDDKMVLEKI---QRSKV 122
Query: 224 PILLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
P++L++NK D +K E + L+W + D ++P+SA +G V+++R + + L G
Sbjct: 123 PVVLLVNKVDQLKDKERLLPHLQWLNEQHKFDAILPISATHGDNVDELRKIVRSHLQPGY 182
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D V++ RF EI+REK+ +E+PY V + + I I+V
Sbjct: 183 HYYPEDYVTDRSVRFMAAEIVREKLMRFTGDELPYETTVEIEQFGQSEKGTTHIHALILV 242
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ +QK ++IG+GG LK + T AR D+E L KV +++ VKVK W DE LK GY
Sbjct: 243 EREAQKRMIIGQGGSKLKTIGTEARRDLEKLLDNKVMMKLWVKVKSGWSDDERALKSLGY 302
>gi|256425495|ref|YP_003126148.1| GTP-binding protein Era [Chitinophaga pinensis DSM 2588]
gi|256040403|gb|ACU63947.1| GTP-binding protein Era [Chitinophaga pinensis DSM 2588]
Length = 289
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 179/291 (61%), Gaps = 12/291 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++ GK N GKSTL N ++G+KL+IV+ K QTTRHRI G+ + PEYQ++ DTPGII+ +
Sbjct: 8 NIFGKANAGKSTLMNALVGEKLAIVSPKVQTTRHRITGVVTTPEYQIVFSDTPGIIDPR- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGV---GDHKDKLPILLVLNK 231
+ L MM V+SA +AD ++++D + + LEE + K K +LVLNK
Sbjct: 67 YRLHEKMMGAVKSALEDADVAMLIMD-------VKDNLEENLSLFASLKLKARTILVLNK 119
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
DL+ E+ ++ E++ ++V+ +SA G GV + I+ LP +YP+D ++
Sbjct: 120 SDLLMKEELDVLVKKCEEWGKAEKVVLISAMQGKGVPALLQTIVGMLPESEPFYPEDTLT 179
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ RFFVGEI+REKIF + E+PY V V ++ + T I +I+V + +QK I+
Sbjct: 180 DKSTRFFVGEIVREKIFQLFDEEIPYHTAVAVTQFQEKNTLIK-ISADIIVTRETQKAII 238
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+G G ++K + T AR DIE F+ +KV+LE+ VKV+ WR ++ LK YGY
Sbjct: 239 LGDKGSSIKKIGTLARQDIEKFVGQKVFLELFVKVRGKWRDNDIYLKEYGY 289
>gi|373465538|ref|ZP_09556996.1| ribosome biogenesis GTPase Era [Lactobacillus kisonensis F0435]
gi|371760197|gb|EHO48893.1| ribosome biogenesis GTPase Era [Lactobacillus kisonensis F0435]
Length = 298
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 179/300 (59%), Gaps = 18/300 (6%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N+++GQK++I+++K QTTR++I G+ + E Q++ DTPGI
Sbjct: 7 HSGFVAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTKEAQIVFIDTPGI 66
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 222
+ K + D MM++ SA D ++ +V+A + G GD+ K
Sbjct: 67 HKPKDKLGD-FMMESALSALKEVDAVLFMVNATE---------RRGAGDNFIIDQLKKVD 116
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
PI L++NK D I P +I ++ Y+ +V P+SA G+ V ++ + ++ +LP GP
Sbjct: 117 QPIYLLINKIDEISPDDIMAIIDQYKSALKFKDVYPISALQGNNVPELIEALVKELPEGP 176
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP+D V++HPERF + E+IREK+ R E+P + V + K IQ I+V
Sbjct: 177 QYYPEDQVTDHPERFVISELIREKVMQLTRQEIPTSTAVYIEKIKNDDGLLR-IQATIIV 235
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++ QK I+IGKGG LK + T AR DIE+ + KV+LE+ VKV+ WR + LL YGY
Sbjct: 236 ERDGQKGIVIGKGGLMLKKIGTLARKDIENMMGNKVFLELWVKVQPRWRDKQSLLDSYGY 295
>gi|418967454|ref|ZP_13519117.1| GTP-binding protein Era [Streptococcus mitis SK616]
gi|383344067|gb|EID22237.1| GTP-binding protein Era [Streptococcus mitis SK616]
Length = 299
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVIFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEDTDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIEPMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|154498351|ref|ZP_02036729.1| hypothetical protein BACCAP_02340 [Bacteroides capillosus ATCC
29799]
gi|150272662|gb|EDM99840.1| ribosome biogenesis GTPase Era [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 297
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 176/293 (60%), Gaps = 13/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+K++IVTNKPQTTR+RI + + E Q + DTPG+ +
Sbjct: 10 AIVGRPNVGKSTLTNALVGEKIAIVTNKPQTTRNRICAVLNRGECQFVFMDTPGLHRART 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDA---CKAPER--IDEILEEGVGDHKDKLPILLVL 229
+ D M+K VR + + D +++LV+ PE I+ I GV P +LV+
Sbjct: 70 RLGD-YMVKVVRDSVADVDAVMLLVEPIPHVGGPEEELIERIKALGV-------PSVLVI 121
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D +K E+ ++ Y + D ++P+SAK G+ED+ + LP GP +P+D+
Sbjct: 122 NKIDTVKKDELLAVMQAYGEKHSFDAILPISAKNSEGLEDLLKVLGEFLPEGPQLFPEDM 181
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++ PER EI+REK+ + E+P+ V V + R + I EK+S K
Sbjct: 182 VTDQPERQVCAEIVREKLLLCLDKEIPHGTAVEVTRFIERDDEVIEMDATIYCEKDSHKG 241
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGG LK ++T AR DIE F+ KV+L+ VKVKENWR + L++++GY
Sbjct: 242 IIIGKGGAMLKKISTLARQDIERFMGTKVFLQTWVKVKENWRDNLNLIQNFGY 294
>gi|406674537|ref|ZP_11081736.1| GTP-binding protein Era [Bergeyella zoohelcum CCUG 30536]
gi|423317499|ref|ZP_17295404.1| GTP-binding protein Era [Bergeyella zoohelcum ATCC 43767]
gi|405580091|gb|EKB54163.1| GTP-binding protein Era [Bergeyella zoohelcum ATCC 43767]
gi|405583092|gb|EKB57061.1| GTP-binding protein Era [Bergeyella zoohelcum CCUG 30536]
Length = 291
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 178/288 (61%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPN GKSTL N+++G+KL+IVT K QTTRHRI GI + + Q++ DTPG++E K
Sbjct: 8 NIVGKPNAGKSTLLNRLMGEKLAIVTQKAQTTRHRIFGIYNEDDLQIVFSDTPGVLEPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM V+ + +AD + +VD+ E + ++++ +K +P+L++LNK D
Sbjct: 67 YELQEKMMDFVKDSLQDADVFLFIVDSTDKSEPSEFLIDKL---NKIPVPVLILLNKIDR 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + K E++P+SA G E I + + LP P YY KD ++
Sbjct: 124 SNQEHLNTMIDEWHKRIPKAEILPISALEGFNTEYILPKLKSLLPENPPYYDKDQFTDKS 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERFFV E IREKI + Y E+PY+ +V +K FI I VE+ +QK ILIG
Sbjct: 184 ERFFVNEAIREKILLNYEKEIPYSVEVVTEQFKEN-EGIIFIDTVIYVERETQKGILIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+A+K + T ARLD+E F KK++L + VKVK++WR++E LK++GY
Sbjct: 243 KGEAIKKVGTQARLDLEQFFGKKIHLNLFVKVKKDWRKNERDLKNFGY 290
>gi|445115592|ref|ZP_21378288.1| GTP-binding protein Era [Prevotella nigrescens F0103]
gi|444840359|gb|ELX67393.1| GTP-binding protein Era [Prevotella nigrescens F0103]
Length = 293
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 176/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + LE+ K ++P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADILLYVTDVIEKPEKNTDFLEKVA---KMQIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + E++P+SAK G + + I LP PAY+ KD +++ P
Sbjct: 124 SDQKTLVALVEKWHGLLPKAEILPISAKNKFGTDVLMKRIKELLPESPAYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ALK ++T AR +E F KK++LE VKV ++WR + L ++GY
Sbjct: 243 QGQALKKVSTEARKSLERFFDKKIFLETFVKVDKDWRNSQKELGNFGYN 291
>gi|401681480|ref|ZP_10813380.1| GTP-binding protein Era [Streptococcus sp. AS14]
gi|400186250|gb|EJO20463.1| GTP-binding protein Era [Streptococcus sp. AS14]
Length = 299
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 184/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V V S K + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDKETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|341820912|emb|CCC57231.1| GTP-binding protein Era [Weissella thailandensis fsh4-2]
Length = 302
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 172/295 (58%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + E QM+ DTPGI K
Sbjct: 12 ALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTNEGQMVFMDTPGI-HKPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILL 227
+ L M+K SA +D + +LV+A + E GVGD + P+ L
Sbjct: 71 NSLGDYMVKTAMSALRESDMVWLLVNADQ---------ERGVGDDFIINRLKESNTPVYL 121
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
++NK DLI E+ ++ Y D E+ P+SA G GV ++ + + + GP YYP+
Sbjct: 122 IINKVDLIDRAEVLNQIADYNAQMDFAEIFPISALTGEGVPELLRFTMDHMAAGPQYYPE 181
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++HPERF + E+IREK+ R EVP++ V + K +Q IVVE+ SQ
Sbjct: 182 DQLTDHPERFIMSELIREKVLELTRQEVPHSVAVVIDKIAREDEQKLHVQATIVVERPSQ 241
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGK G +K + AR DIE L K++LE VKV++ WR L+ YGY
Sbjct: 242 KNIIIGKRGAMIKEIGIRARKDIERLLGDKIFLETWVKVEDRWRDKPQALQSYGY 296
>gi|320106113|ref|YP_004181703.1| GTP-binding protein Era [Terriglobus saanensis SP1PR4]
gi|319924634|gb|ADV81709.1| GTP-binding protein Era [Terriglobus saanensis SP1PR4]
Length = 349
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 187/329 (56%), Gaps = 38/329 (11%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP------------EYQMI 162
S++G+PN GKSTL N ++G+K++IVT+KPQTTR+RILG+ P Q++
Sbjct: 9 SIVGRPNAGKSTLLNALLGEKIAIVTHKPQTTRNRILGVLELPIRKKAAKDPGRGAAQVV 68
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC---KAPERIDEIL---EEGV 216
L DTPG+ + H LD MM+ V A + D ++ +VDA A + D+ + +
Sbjct: 69 LVDTPGVHKPSSH-LDKRMMQEVYDALESRDVVLFIVDATHRLPAESKSDKPFTRDRKAM 127
Query: 217 GDHKDKL----------PILLVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGH 265
+D P+LLVLNK D + E+ + W EK+ + EVIP+SAK
Sbjct: 128 SAEEDTFALSLLKNVDSPVLLVLNKIDSVPRAELLPLIAHWSEKY-NFAEVIPISAKKKD 186
Query: 266 GVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVS 325
G+E + D ++ +LP G Y+PKD +++ PERF E+IREKI M EVPYA V V +
Sbjct: 187 GLEVLLDAVVKRLPEGQRYFPKDQLTDQPERFLAAELIREKILMFTGEEVPYASAVVVEA 246
Query: 326 Y-----KTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYL 380
+ KT P K I I VE+ QK I+IG+ G LK + TAAR +IE + +V+L
Sbjct: 247 WEEAKSKTNPLTK--ISAAIYVERTGQKAIVIGRAGAMLKQIGTAARKEIESLVGTRVFL 304
Query: 381 EIEVKVKENWRQDEGLLKHYGYGGQIQAL 409
E+ VKVK++WR G ++ + Q++ +
Sbjct: 305 ELFVKVKDDWRSSRGFVEELDWRRQLEEM 333
>gi|448238767|ref|YP_007402825.1| GTP-binding protein [Geobacillus sp. GHH01]
gi|445207609|gb|AGE23074.1| GTP-binding protein [Geobacillus sp. GHH01]
Length = 302
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG+ + K
Sbjct: 12 AIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTPGVHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +V+A + R + + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDT--PVFLVINKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++ Y+ E++P+SA G+ V+ + + I +LP GP YYP D +++HP
Sbjct: 129 VHPDELLPLIDRYKDLYPFAEIVPISALEGNNVDRLLEQIKERLPEGPQYYPPDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
E+F + E+IREK R EVP++ V V + R + +I IVVE++SQK I+IG
Sbjct: 189 EQFIIAELIREKALHLTREEVPHSIAVVVERIERREGSGTVYISAVIVVERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR DIE L KV+LE+ VKV+++WR L+ +G+
Sbjct: 249 KQGRMLKEIGQRARADIEALLGSKVFLELWVKVQKDWRNRMAQLRDFGF 297
>gi|422878357|ref|ZP_16924823.1| GTP-binding protein Era [Streptococcus sanguinis SK1059]
gi|422928211|ref|ZP_16961153.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 29667]
gi|422931207|ref|ZP_16964138.1| GTP-binding protein Era [Streptococcus sanguinis SK340]
gi|332367331|gb|EGJ45066.1| GTP-binding protein Era [Streptococcus sanguinis SK1059]
gi|339617356|gb|EGQ21982.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 29667]
gi|339620389|gb|EGQ24959.1| GTP-binding protein Era [Streptococcus sanguinis SK340]
Length = 299
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADETRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|375009575|ref|YP_004983208.1| GTP-binding protein era [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288424|gb|AEV20108.1| GTP-binding protein era [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 302
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 181/291 (62%), Gaps = 8/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG+ + K
Sbjct: 12 AIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTPGVHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +V+A + R + + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDT--PVFLVINKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++ Y+ E++P+SA G+ V+ + + I +LP GP YYP D +++HP
Sbjct: 129 VHPDELLPLIDRYKDLYPFAEIVPISALEGNNVDRLLEQIKERLPEGPQYYPPDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR---PTAKDFIQVEIVVEKNSQKIIL 351
E+F + E+IREK R EVP++ V V + R PT +I IVVE++SQK I+
Sbjct: 189 EQFIIAELIREKALHLTREEVPHSIAVVVERIERREGSPTV--YISAVIVVERDSQKGII 246
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G+ LK + AR DIE L KV+LE+ VKV+++WR L+ +G+
Sbjct: 247 IGKQGRMLKEIGQRARADIEALLGSKVFLELWVKVQKDWRNRLSQLRDFGF 297
>gi|385261366|ref|ZP_10039491.1| GTP-binding protein Era [Streptococcus sp. SK140]
gi|385188368|gb|EIF35854.1| GTP-binding protein Era [Streptococcus sp. SK140]
Length = 299
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEDTDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|153953550|ref|YP_001394315.1| GTP-binding protein Era [Clostridium kluyveri DSM 555]
gi|219854172|ref|YP_002471294.1| hypothetical protein CKR_0829 [Clostridium kluyveri NBRC 12016]
gi|189037262|sp|A5N6N6.1|ERA_CLOK5 RecName: Full=GTPase Era
gi|254783294|sp|B9E055.1|ERA_CLOK1 RecName: Full=GTPase Era
gi|146346431|gb|EDK32967.1| Predicted GTP-binding protein [Clostridium kluyveri DSM 555]
gi|219567896|dbj|BAH05880.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 293
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 178/295 (60%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+ KPQTTR+ I I + ++Q+I DTPGI + K
Sbjct: 8 TIIGRPNVGKSTLLNSIMGEKLSIVSCKPQTTRNSIQTILTRDDFQLIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L + M+K S+ + D I+ L+ P+ +E G GD K+ +P+ L
Sbjct: 67 HKLGNYMVKVAESSVKDVDLILFLI----TPD-----VEVGKGDRYILEQLKKENIPVFL 117
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D ++A+ L+ Y + D E+IP+SA V+++ + ++ +P GP YYP
Sbjct: 118 VVNKIDENPQEKVAQTLKNYSEIFDFAEIIPISALKQKNVKELVELMVKYMPEGPKYYPD 177
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D++++ E+F V EIIREK EVP+ V+++S K I+ I+ EK S
Sbjct: 178 DMITDKQEKFVVSEIIREKALRLLSKEVPHGIAVDILSMKKNSKGLYNIEATILCEKESH 237
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGK G LK ++T AR DIE FL KVYLE+ VKVK+ WR + LLK GY
Sbjct: 238 KGIIIGKKGAMLKKISTYAREDIEKFLDSKVYLEVWVKVKKEWRDSDRLLKELGY 292
>gi|322391812|ref|ZP_08065277.1| GTP-binding protein Era [Streptococcus peroris ATCC 700780]
gi|321145292|gb|EFX40688.1| GTP-binding protein Era [Streptococcus peroris ATCC 700780]
Length = 299
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIMERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSHLVDILSDNLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R EVP++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEVPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|393785544|ref|ZP_10373694.1| GTP-binding protein Era [Bacteroides salyersiae CL02T12C01]
gi|392662299|gb|EIY55863.1| GTP-binding protein Era [Bacteroides salyersiae CL02T12C01]
Length = 293
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 179/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERVSIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ K +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADILLYVTDVIETPDKNNEFIEKV---RKMTVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E ++ E+IP+SA ++ + + LP P Y+ KD ++ P
Sbjct: 124 TDQEKLIQLVEEWKALLPQAEIIPISAASKFNIDYVMKRVKELLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K I I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEQFKEEAKMIH-IHAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR D+E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRDLERFFGKTIFLETYVKVDKDWRSSDKELRNFGY 290
>gi|325855172|ref|ZP_08171795.1| ribosome biogenesis GTPase Era [Prevotella denticola CRIS 18C-A]
gi|325483909|gb|EGC86853.1| ribosome biogenesis GTPase Era [Prevotella denticola CRIS 18C-A]
Length = 293
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 178/290 (61%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADVLLYVTDVVENPEKNMDFLEKVA---KMTIPVILLINKIDE 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ + +E W+ D E++P+SAK G + + + LP PA++ KD +++
Sbjct: 124 SDQSKLVELVEKWHGLLPDA-EILPISAKNKFGTDILMKRVRELLPESPAFFDKDQLTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
P RFFV EIIREKI Y E+PY+ +V V +K + I I VE++SQK I+IG
Sbjct: 183 PARFFVSEIIREKILRYYDKEIPYSVEVVVERFK-EDDRQIHINAVIYVERSSQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KK++LE VKV ++WR + L ++GY
Sbjct: 242 HQGMALKKMSTEARKSLERFFDKKIFLETFVKVDKDWRNSQKELNNFGYN 291
>gi|375085630|ref|ZP_09732262.1| GTP-binding protein Era [Megamonas funiformis YIT 11815]
gi|374567041|gb|EHR38273.1| GTP-binding protein Era [Megamonas funiformis YIT 11815]
Length = 298
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 171/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IGQK++I+++KPQTTR++I+ + + Q+I DTPGI K +
Sbjct: 12 AVIGRPNVGKSTLINSLIGQKIAIMSDKPQTTRNKIMCVLTTDNEQVIFLDTPGI-HKPL 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K D I+ +VDA + + + E + K P++L++NK DL
Sbjct: 71 HKLGEYMVKAAEGTLKEVDAILFVVDATEDLGGGERYIMERL--QATKKPVILIVNKLDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I + +E Y K D V+P+SAK ++ + + LP GP YYP D V++ P
Sbjct: 129 IDRQSVLPIIEKYTKAYDFAGVVPISAKEKMNLDSLLAELNKYLPEGPQYYPADTVTDQP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER E+IREK+ R+E+P+A V++ K+R K +I+ I VE+ SQK I+IGK
Sbjct: 189 ERLIAAEMIREKVLHLTRDEIPHAIAVDIEEMKSRANDKVYIRATIYVERESQKGIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L K YL++ VKVK++WR +L+ G+
Sbjct: 249 RGALLKEIGALARKDIETMLGSKTYLDLWVKVKKDWRDRSNVLRELGF 296
>gi|121534215|ref|ZP_01666040.1| GTP-binding protein Era [Thermosinus carboxydivorans Nor1]
gi|121307318|gb|EAX48235.1| GTP-binding protein Era [Thermosinus carboxydivorans Nor1]
Length = 298
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 173/295 (58%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N ++GQK++I+++KPQTTR+RIL + + + Q++ DTPGI + K
Sbjct: 13 AVIGRPNVGKSTLVNSLVGQKIAIMSDKPQTTRNRILCVLTLDDAQILFIDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L M++ + D I+ +VDA E+G G+ K P++L
Sbjct: 72 HRLGEYMVQAAETTLREVDVILFVVDATA---------EKGAGEQYILERLAKVATPVIL 122
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D I ++ ++ Y + D V+P+SA ++ + D + L GP YYP
Sbjct: 123 VVNKVDQIPKPQVLPIIDQYARSRDFAAVVPISALQKVNLDRLLDEVKKHLAPGPKYYPD 182
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D+V++ PER + E+IREK R E+P+A V++ RP +I+ I VE++SQ
Sbjct: 183 DMVTDQPERLIIAELIREKALHLTREEIPHAIAVDIEEIVKRPNGDLYIRAVIYVERDSQ 242
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IG GG LK + AR+DIE+ L K YL++ VKVK +WR E +L+ GY
Sbjct: 243 KGIIIGAGGNMLKEIGRLARVDIENLLGSKSYLDLWVKVKRDWRNRESVLRSLGY 297
>gi|85860146|ref|YP_462348.1| GTP-binding protein [Syntrophus aciditrophicus SB]
gi|123738843|sp|Q2LVR8.1|ERA_SYNAS RecName: Full=GTPase Era
gi|85723237|gb|ABC78180.1| GTP-binding protein [Syntrophus aciditrophicus SB]
Length = 306
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 179/300 (59%), Gaps = 28/300 (9%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PNVGKSTL N ++G+KL+I+T+KPQTTR+RI+GI + Q I DTPGI
Sbjct: 20 IIGRPNVGKSTLLNGILGEKLAIITHKPQTTRNRIMGIRNADNAQFIFVDTPGIHSASTP 79
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL--------- 226
L+ +M++ ++D ++++V+A +A H + LPI+
Sbjct: 80 -LNRLMVRTATETFTDSDILLLVVEAGQAV-------------HPEDLPIIESLKESGTI 125
Query: 227 --LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
L+LNK DLI+ ++ ++ Y E+IP+SA G G+ + D + LP GP Y
Sbjct: 126 SFLILNKIDLIRKEQLLPLMDAYRNLHSFAELIPISALTGEGIPLLLDELWKYLPEGPQY 185
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVV 342
+P D++++ ERF EIIREKI + E+PY+ V V ++K A++ I++ I V
Sbjct: 186 FPDDMMTDQSERFLAAEIIREKILLLTHKEIPYSSAVVVDAFK-EDEARNLIRISATINV 244
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
EK SQK I+IGK G LK + T AR+D+E F +++LE+ V+V+++W +D +L+ +GY
Sbjct: 245 EKESQKGIIIGKKGTMLKEIGTRARVDMEKFFATRIFLELFVRVRKDWTKDPRMLREFGY 304
>gi|307709149|ref|ZP_07645608.1| GTP-binding protein Era [Streptococcus mitis SK564]
gi|307620095|gb|EFN99212.1| GTP-binding protein Era [Streptococcus mitis SK564]
Length = 299
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDKETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|422851217|ref|ZP_16897887.1| GTP-binding protein Era [Streptococcus sanguinis SK150]
gi|325694805|gb|EGD36710.1| GTP-binding protein Era [Streptococcus sanguinis SK150]
Length = 299
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLVDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|365845202|ref|ZP_09385988.1| ribosome biogenesis GTPase Era [Flavonifractor plautii ATCC 29863]
gi|364561379|gb|EHM39284.1| ribosome biogenesis GTPase Era [Flavonifractor plautii ATCC 29863]
Length = 290
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 175/296 (59%), Gaps = 19/296 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++G+K++IVTNKPQTTR+RI + + Q + DTPG+ + +
Sbjct: 3 SIVGRPNVGKSTLTNALVGEKIAIVTNKPQTTRNRICAVVNREGCQFVFLDTPGLHKART 62
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK---APE-----RIDEILEEGVGDHKDKLPIL 226
+ D M+K V+ + + D +++LV+ PE RI E+ +P +
Sbjct: 63 RLGD-YMVKVVKESVADVDAVLLLVEPIPHIGGPEAELIRRIKEL----------NVPAV 111
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
LV+NK D ++ E+ ++ Y D ++P+SAK GV+++ + LP GP +P
Sbjct: 112 LVINKIDTVEKEELLSVMQVYGAAHDFAAIVPISAKRNEGVDELLGLLAQFLPEGPQLFP 171
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
+D+V++ PER EIIREK+ + E+P+ V + ++ R + I EK S
Sbjct: 172 EDMVTDQPERQVCAEIIREKLLLCLDKEIPHGTAVEITTFSERDDGIIDLDATIYCEKAS 231
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGG LK ++T AR DIE F+ KV+L+ VKVKENWR + L+K++GY
Sbjct: 232 HKGIIIGKGGAMLKKISTLARTDIEAFMGTKVFLQTWVKVKENWRDNMNLIKNFGY 287
>gi|373116157|ref|ZP_09530313.1| GTP-binding protein Era [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669621|gb|EHO34720.1| GTP-binding protein Era [Lachnospiraceae bacterium 7_1_58FAA]
Length = 297
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 175/296 (59%), Gaps = 19/296 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++G+K++IVTNKPQTTR+RI + + Q + DTPG+ + +
Sbjct: 10 SIVGRPNVGKSTLTNALVGEKIAIVTNKPQTTRNRICAVVNREGCQFVFLDTPGLHKART 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK---APE-----RIDEILEEGVGDHKDKLPIL 226
+ D M+K V+ + + D +++LV+ PE RI E+ +P +
Sbjct: 70 RLGD-YMVKVVKESVADVDAVLLLVEPIPHIGGPEAELIRRIKEL----------NVPAV 118
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
LV+NK D ++ E+ ++ Y D ++P+SAK GV+++ + LP GP +P
Sbjct: 119 LVINKIDTVEKEELLSVMQVYGAAHDFAAIVPISAKRNEGVDELLGLLAQFLPEGPQLFP 178
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
+D+V++ PER EIIREK+ + E+P+ V + ++ R + I EK S
Sbjct: 179 EDMVTDQPERQVCAEIIREKLLLCLDKEIPHGTAVEITTFSERDDGIIDLDATIYCEKAS 238
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGG LK ++T AR DIE F+ KV+L+ VKVKENWR + L+K++GY
Sbjct: 239 HKGIIIGKGGAMLKKISTLARTDIEAFMGTKVFLQTWVKVKENWRDNMNLIKNFGY 294
>gi|333378284|ref|ZP_08470015.1| GTP-binding protein Era [Dysgonomonas mossii DSM 22836]
gi|332883260|gb|EGK03543.1| GTP-binding protein Era [Dysgonomonas mossii DSM 22836]
Length = 293
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 184/297 (61%), Gaps = 15/297 (5%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N ++G+K+SI+T+K QTTRHRILGI + EYQ++ DTPG
Sbjct: 2 HKSGFVNIVGNPNVGKSTLMNLLVGEKVSIITSKAQTTRHRILGIVNTDEYQIVYSDTPG 61
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + +SM+ + SA +AD ++ + D + ++ +E L++ G P+LL+
Sbjct: 62 VLRPNYKLQESMLNFS-ESALSDADVLLYMTDVVEKIDKNEEFLKKVQGVQA---PVLLL 117
Query: 229 LNKKDLIKPGEI-AKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK D E+ A L W E + E+ P+SA + ++ I+ +P P Y+ K
Sbjct: 118 INKIDQTNQKELEALVLRWKELLPNA-EIYPISALNKFNADVVKKRIIDLIPESPPYFEK 176
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 345
D +++ P RFFV EIIREKI + Y+ E+PY+ + V + KD I + I+VE++
Sbjct: 177 DALTDRPARFFVTEIIREKILLYYQKEIPYSVE---VVVEEFKEEKDIINIRALIIVERD 233
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+QK I+IG G ALK L T AR DIE F KKV+L+I VKV+++WR + +L+ +GY
Sbjct: 234 TQKGIVIGHQGAALKKLGTMARKDIERFFDKKVFLQIFVKVEKDWRSRDNILRQFGY 290
>gi|160882377|ref|ZP_02063380.1| hypothetical protein BACOVA_00326 [Bacteroides ovatus ATCC 8483]
gi|237719051|ref|ZP_04549532.1| GTP-binding protein Era [Bacteroides sp. 2_2_4]
gi|299148135|ref|ZP_07041197.1| GTP-binding protein Era [Bacteroides sp. 3_1_23]
gi|336415766|ref|ZP_08596105.1| GTP-binding protein Era [Bacteroides ovatus 3_8_47FAA]
gi|383114089|ref|ZP_09934854.1| GTP-binding protein Era [Bacteroides sp. D2]
gi|423292359|ref|ZP_17270937.1| GTP-binding protein Era [Bacteroides ovatus CL02T12C04]
gi|423294534|ref|ZP_17272661.1| GTP-binding protein Era [Bacteroides ovatus CL03T12C18]
gi|156112190|gb|EDO13935.1| ribosome biogenesis GTPase Era [Bacteroides ovatus ATCC 8483]
gi|229451430|gb|EEO57221.1| GTP-binding protein Era [Bacteroides sp. 2_2_4]
gi|298512896|gb|EFI36783.1| GTP-binding protein Era [Bacteroides sp. 3_1_23]
gi|313694202|gb|EFS31037.1| GTP-binding protein Era [Bacteroides sp. D2]
gi|335940645|gb|EGN02512.1| GTP-binding protein Era [Bacteroides ovatus 3_8_47FAA]
gi|392661768|gb|EIY55341.1| GTP-binding protein Era [Bacteroides ovatus CL02T12C04]
gi|392675725|gb|EIY69166.1| GTP-binding protein Era [Bacteroides ovatus CL03T12C18]
Length = 293
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 183/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMEKV---RQMTVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVKLVEEWKELLPQAEIIPISATSKFNVDYVMKRIKELLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K P K I+ I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEEFKEEP-KKIHIRAVINVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR ++E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRELERFFGKTIFLETYVKVDKDWRSSDKELRNFGY 290
>gi|125718416|ref|YP_001035549.1| GTP-binding protein Era [Streptococcus sanguinis SK36]
gi|323351170|ref|ZP_08086826.1| GTP-binding protein Era [Streptococcus sanguinis VMC66]
gi|422820831|ref|ZP_16869024.1| GTP-binding protein Era [Streptococcus sanguinis SK353]
gi|422847118|ref|ZP_16893801.1| GTP-binding protein Era [Streptococcus sanguinis SK72]
gi|422848220|ref|ZP_16894896.1| GTP-binding protein Era [Streptococcus sanguinis SK115]
gi|422854685|ref|ZP_16901349.1| GTP-binding protein Era [Streptococcus sanguinis SK160]
gi|422859708|ref|ZP_16906352.1| GTP-binding protein Era [Streptococcus sanguinis SK330]
gi|422870488|ref|ZP_16916981.1| GTP-binding protein Era [Streptococcus sanguinis SK1087]
gi|422875967|ref|ZP_16922437.1| GTP-binding protein Era [Streptococcus sanguinis SK1056]
gi|422884566|ref|ZP_16931014.1| GTP-binding protein Era [Streptococcus sanguinis SK49]
gi|189037679|sp|A3CP94.1|ERA_STRSV RecName: Full=GTPase Era
gi|125498333|gb|ABN44999.1| Era-like GTP-binding protein, putative [Streptococcus sanguinis
SK36]
gi|322122394|gb|EFX94105.1| GTP-binding protein Era [Streptococcus sanguinis VMC66]
gi|324991449|gb|EGC23382.1| GTP-binding protein Era [Streptococcus sanguinis SK353]
gi|325687311|gb|EGD29333.1| GTP-binding protein Era [Streptococcus sanguinis SK72]
gi|325690752|gb|EGD32753.1| GTP-binding protein Era [Streptococcus sanguinis SK115]
gi|325696180|gb|EGD38071.1| GTP-binding protein Era [Streptococcus sanguinis SK160]
gi|327470591|gb|EGF16047.1| GTP-binding protein Era [Streptococcus sanguinis SK330]
gi|328946703|gb|EGG40841.1| GTP-binding protein Era [Streptococcus sanguinis SK1087]
gi|332358996|gb|EGJ36817.1| GTP-binding protein Era [Streptococcus sanguinis SK49]
gi|332362403|gb|EGJ40203.1| GTP-binding protein Era [Streptococcus sanguinis SK1056]
Length = 299
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|118580146|ref|YP_901396.1| GTP-binding protein Era [Pelobacter propionicus DSM 2379]
gi|259645964|sp|A1APR8.1|ERA_PELPD RecName: Full=GTPase Era
gi|118502856|gb|ABK99338.1| GTP-binding protein Era [Pelobacter propionicus DSM 2379]
Length = 296
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 181/296 (61%), Gaps = 14/296 (4%)
Query: 112 NHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIE 171
+ S++G+PNVGKSTL N++IG+K++I ++KPQTTR+RI GI + Q++ DTPGI
Sbjct: 9 GYVSIVGRPNVGKSTLLNRIIGEKIAITSDKPQTTRNRIQGIHNIANGQIVFIDTPGI-- 66
Query: 172 KKIHMLDSMMMKNVRSAGINA----DCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
H S + K + A + A D ++++VDA A + D ++ + +G P++L
Sbjct: 67 ---HACHSRLNKGMVDAALAALRGVDLLLLVVDAGGAID--DRLVRDVLGGTGT--PVML 119
Query: 228 VLNKKDLIKPGEIA-KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
VLNK DL+ + +++ + + E++P+SA G GV+ + + + LP G +P
Sbjct: 120 VLNKVDLLADKRVLLERMAAWSQLYPFREILPISAGSGEGVDGLIETVCGYLPEGQPLFP 179
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
DI+++ PERF V E+IREKIF R+E+PY+ V V S+ RP I I +E+ +
Sbjct: 180 DDILTDLPERFIVAEMIREKIFRLTRDEIPYSTAVTVESFTERPNGVVAISAAICLERPN 239
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGK G+ LK + + AR DIE L +V+LE+ VK++ENW + L+ +GY
Sbjct: 240 QKGIIIGKKGEMLKKIGSQARHDIERLLGTRVFLELFVKIEENWSERTSKLREFGY 295
>gi|339641574|ref|ZP_08663018.1| GTP-binding protein Era [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339454843|gb|EGP67458.1| GTP-binding protein Era [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 299
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--RAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLVDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L K++LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKIFLETWVKVKKNWRDKKLDLADFGY 294
>gi|319946540|ref|ZP_08020775.1| GTP-binding protein Era [Streptococcus australis ATCC 700641]
gi|417920629|ref|ZP_12564130.1| GTP-binding protein Era [Streptococcus australis ATCC 700641]
gi|319747286|gb|EFV99544.1| GTP-binding protein Era [Streptococcus australis ATCC 700641]
gi|342828422|gb|EGU62795.1| GTP-binding protein Era [Streptococcus australis ATCC 700641]
Length = 299
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|258647984|ref|ZP_05735453.1| GTP-binding protein Era [Prevotella tannerae ATCC 51259]
gi|260851825|gb|EEX71694.1| GTP-binding protein Era [Prevotella tannerae ATCC 51259]
Length = 293
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 177/290 (61%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N +G+++SI T K QTTRHRILGI + P+ Q+I DTPG+++
Sbjct: 7 NIVGNPNVGKSTLMNLFVGERISIATFKAQTTRHRILGIVNKPDAQIIFSDTPGVLKPNY 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEE-GVGDHKDKLPILLVLNKKD 233
M +M+ + SA +AD ++ + D + E+ E LE+ V + +P+L+++NK D
Sbjct: 67 KMQKAMLTFS-ESALTDADILLYVTDVIEDQEKNKEFLEKVAVAN----VPVLVLINKID 121
Query: 234 LIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
L E+ + + +W E+ E+IP+SAK + + I LP GPAY+ KD ++
Sbjct: 122 LSSQKEVEQLIKQWQERLPKA-EIIPLSAKAKFNTDTVLQRIEALLPEGPAYFEKDQWTD 180
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE+ SQK I+I
Sbjct: 181 KSARFFVTEIIREKILLYYAKEIPYSVEVVVELFK-EDAKKIHINAVIYVERESQKGIII 239
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G G ALK ++T AR +E F K +YLE+ VKV ++WR +E L+ +GY
Sbjct: 240 GHKGIALKKVSTEARKALERFFNKSIYLEVFVKVNKDWRNNERALEGFGY 289
>gi|319900092|ref|YP_004159820.1| GTP-binding protein Era [Bacteroides helcogenes P 36-108]
gi|319415123|gb|ADV42234.1| GTP-binding protein Era [Bacteroides helcogenes P 36-108]
Length = 293
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 181/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ ++ +E+ + ++P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADVLLYVTDVVETPDKHNDFVEKVA---QMEVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E +++ E++P+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TNQEKLVELVEAWKELLPKAEIVPISATTKFNVDYVMKRIKEFLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK I+IGK
Sbjct: 184 ARFFVTEIIREKILLYYDKEIPYSVEVVVEQFKEE-AKKIHINAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR ++E F K ++LE VKV ++WR + L+ +GY
Sbjct: 243 QGKALKKVATEARRELEKFFGKTIFLETFVKVDKDWRSSDKELRSFGY 290
>gi|422882692|ref|ZP_16929148.1| GTP-binding protein Era [Streptococcus sanguinis SK355]
gi|332358725|gb|EGJ36548.1| GTP-binding protein Era [Streptococcus sanguinis SK355]
Length = 299
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|56421023|ref|YP_148341.1| GTP-binding protein [Geobacillus kaustophilus HTA426]
gi|56380865|dbj|BAD76773.1| GTP-binding protein [Geobacillus kaustophilus HTA426]
Length = 302
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 181/291 (62%), Gaps = 8/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG+ + K
Sbjct: 12 AIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTPGVHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +V+A + R + + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDT--PVFLVINKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++ Y+ E++P+SA G+ V+ + + I +LP GP YYP D +++HP
Sbjct: 129 VHPDELLPLIDRYKDLYPFAEIVPISALEGNNVDRLLEQIKERLPEGPQYYPPDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR---PTAKDFIQVEIVVEKNSQKIIL 351
E+F + E+IREK R EVP++ V V + R PT +I IVVE++SQK I+
Sbjct: 189 EQFIIAELIREKALHLTREEVPHSIAVVVERIERREGSPTV--YISAVIVVERDSQKGII 246
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G+ LK + AR DIE L +V+LE+ VKV+++WR L+ +G+
Sbjct: 247 IGKQGRMLKEIGQRARADIEALLGSRVFLELWVKVQKDWRNRLSQLRDFGF 297
>gi|417848260|ref|ZP_12494209.1| GTP-binding protein Era [Streptococcus mitis SK1073]
gi|339455007|gb|EGP67620.1| GTP-binding protein Era [Streptococcus mitis SK1073]
Length = 299
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|381184009|ref|ZP_09892687.1| GTPase Era [Listeriaceae bacterium TTU M1-001]
gi|380316096|gb|EIA19537.1| GTPase Era [Listeriaceae bacterium TTU M1-001]
Length = 301
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 178/289 (61%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I+++K QTTR+++ G+ + + Q++ DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNQIIGQKIAIMSDKAQTTRNKVQGVYTEDDAQVVFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + D I ++DA R DE + E + + + P+ L++NK DL
Sbjct: 70 HKLGDFMVKVALNTFREVDLIYFVIDAESGFGRGDEFIIEKLKNVET--PVFLLINKIDL 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + + +E Y+ D E+IP+SA G V ++ L GP YYPKD +++HP
Sbjct: 128 VSKERLVELIEQYKDLLDFAEIIPISALEGEEVPNLLAETKNYLDEGPMYYPKDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IG
Sbjct: 188 ERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTIMATIIVERSTQKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR +IE + KV+LE+ VKV++NWR E L+ YG+
Sbjct: 248 KQGQMLKQIGMRARKEIELLMGSKVFLELWVKVQKNWRDKEHYLQDYGF 296
>gi|298480162|ref|ZP_06998360.1| GTP-binding protein Era [Bacteroides sp. D22]
gi|298273443|gb|EFI15006.1| GTP-binding protein Era [Bacteroides sp. D22]
Length = 293
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 183/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMEKV---RQMTVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVKLVEDWKELLPQAEIIPISATSKFNVDYVMKRIKELLPNSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K P K I+ I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEEFKEEP-KKIHIRAVINVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR ++E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRELERFFGKTIFLETYVKVDKDWRSSDKELRNFGY 290
>gi|421860389|ref|ZP_16292520.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410830137|dbj|GAC42957.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 309
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 177/289 (61%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI ++K
Sbjct: 21 AIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGIHKRKS 80
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+ D M V +N + I+ LVD D+ + E + K K P++LV+NK D
Sbjct: 81 KLGD--YMNQVAYNTLNEVEVILFLVDVSAGLGSGDKFVMEHLA--KVKTPVILVMNKID 136
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P E+ + Y + + E++P+SA +G+ V + + + + +P GP YYP D ++ H
Sbjct: 137 QVNPDELPPMIHSYNERFEFAEIVPISALHGNNVNRLLEVLGSYMPEGPKYYPDDQITNH 196
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE+F V E+IREKI R E+P++ V + + + +I I VE++SQK I+IG
Sbjct: 197 PEQFVVAELIREKILHLTREEIPHSIAVAIEDMRAQDNGVVYISAVIYVERDSQKGIVIG 256
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L K ++E+ VKVK++WR + +L+ G+
Sbjct: 257 KQGALLKEIGKLARQDIEHLLGSKTFMELWVKVKKDWRNQDRILRDLGF 305
>gi|340348766|ref|ZP_08671797.1| GTP-binding protein Era [Prevotella nigrescens ATCC 33563]
gi|339613190|gb|EGQ17975.1| GTP-binding protein Era [Prevotella nigrescens ATCC 33563]
Length = 293
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 176/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + E+ + LE+ K ++P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADILLYVTDVIEKLEKNTDFLEKVA---KMQIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + + E++P+SAK G + + I LP PAY+ KD +++ P
Sbjct: 124 SDQKTLVTLVEKWHELLPKAEILPISAKNKFGTDTLMKRIKELLPESPAYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ALK ++T AR +E F KK++LE VKV ++WR + L ++GY
Sbjct: 243 QGQALKKVSTEARKSLESFFDKKIFLETFVKVDKDWRNSQKELGNFGYN 291
>gi|291522460|emb|CBK80753.1| GTP-binding protein Era [Coprococcus catus GD/7]
Length = 300
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I +NKPQTTR+RI + + E Q++ DTPGI + K
Sbjct: 11 TLIGRPNVGKSTLMNHLIGQKIAITSNKPQTTRNRIQTVYTSEEGQIVFVDTPGIHKAKN 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ + M+ R+ D I+ LV+ ++ + E + K K PI+LV+NK D
Sbjct: 71 KLGEYMVTVAERTLS-EVDVILWLVEPTTFIGAGEQHIAEQL--RKTKTPIILVINKIDT 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K EI K ++ Y+ D E++P SA G ED+ I+ LP GP +Y +D V++ P
Sbjct: 128 VKREEILKSIDAYKDICDFAEIVPCSALKGDNTEDLIKVIMKYLPYGPQFYDEDTVTDQP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER V E+IREK EVP+ V++ K R + I I+ E++S K I+IGK
Sbjct: 188 ERQIVAELIREKALRSLNEEVPHGIAVSIDQMKARNSRLIDIDATIICERDSHKGIIIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + + AR +IED L KKV L++ VKVK++WR + L+K++GY
Sbjct: 248 QGAMLKKIGSQARPEIEDMLGKKVNLKLWVKVKKDWRDSDFLIKNFGY 295
>gi|392531590|ref|ZP_10278727.1| GTP-binding protein Era [Carnobacterium maltaromaticum ATCC 35586]
gi|414083900|ref|YP_006992608.1| GTP-binding protein Era [Carnobacterium maltaromaticum LMA28]
gi|412997484|emb|CCO11293.1| GTP-binding protein Era [Carnobacterium maltaromaticum LMA28]
Length = 299
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 186/294 (63%), Gaps = 7/294 (2%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE QMI DTPG
Sbjct: 4 HKSGFVAIIGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGIYTTPEAQMIFIDTPG 63
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
I + K H L M+ + S D I+++V+A + D + E + +K PI LV
Sbjct: 64 IHKPK-HRLGDFMVDSALSTLREVDVIILMVNAEEKRGPGDNFIIEKL--QGNKTPIFLV 120
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D + P ++ + ++ Y + ++++P+SA G+ VE + + +L LP GP +YP+D
Sbjct: 121 INKIDKVHPEKLLEIIDNYRELLPFEQIVPISATEGNNVETLLNELLRYLPAGPQFYPED 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
V++HPE F V E+IREK+ R E+P++ V V K K +Q I+VE++SQK
Sbjct: 181 QVTDHPEYFIVSELIREKVLELTREEIPHSVAVVVEGMKRNENDKVQVQATIIVERSSQK 240
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + AR DIE L K+YLE+ VKV+++WR + L YGY
Sbjct: 241 GIIIGKGGKMLKDIGIKARRDIEVMLGDKIYLELWVKVQKDWRDKQNYLTDYGY 294
>gi|386714855|ref|YP_006181178.1| GTP-binding protein Era [Halobacillus halophilus DSM 2266]
gi|384074411|emb|CCG45904.1| GTP-binding protein Era [Halobacillus halophilus DSM 2266]
Length = 301
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 181/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IG+K++I+++KPQTTR++I G+ + E Q++ DTPGI + K
Sbjct: 11 TIVGRPNVGKSTFMNRVIGEKIAIMSDKPQTTRNKIQGVMTDKESQIVFIDTPGIHKPKH 70
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+ D M+ NV +N D I+ +++A + R D+ + + + + P+ L++NK D
Sbjct: 71 KLGDYMV--NVAENTLNEVDAILFMINAEEGYGRGDQFIIDRL--QRVNQPVYLIINKID 126
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P ++ +E Y++ D +E+IP+SA G+ V + D + LP GP +YP+D +++H
Sbjct: 127 RVHPDQLLPLIEQYKEKLDFEEIIPISALEGNNVNHLLDVLKGHLPEGPQFYPEDQITDH 186
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILI 352
PERF + E IREK+ E+P++ V + + R +IQ I+VE+ SQK I+I
Sbjct: 187 PERFVISEFIREKVLHLTHEEIPHSIAVVIEGIEPRENKNAVYIQAAIIVERKSQKGIII 246
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + AR DIE L KV+LE+ VKV+++WR + L +GY
Sbjct: 247 GKQGSMLKEIGKRARHDIESLLGSKVFLELWVKVQKDWRNRQVQLSDFGY 296
>gi|337282415|ref|YP_004621886.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 15912]
gi|335370008|gb|AEH55958.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 15912]
Length = 299
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTNKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|385262450|ref|ZP_10040554.1| GTP-binding protein Era [Streptococcus sp. SK643]
gi|385190351|gb|EIF37798.1| GTP-binding protein Era [Streptococcus sp. SK643]
Length = 299
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSDNLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|307708604|ref|ZP_07645068.1| GTP-binding protein Era [Streptococcus mitis NCTC 12261]
gi|307615353|gb|EFN94562.1| GTP-binding protein Era [Streptococcus mitis NCTC 12261]
Length = 299
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKIPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|227529166|ref|ZP_03959215.1| GTP-binding protein Era [Lactobacillus vaginalis ATCC 49540]
gi|227350891|gb|EEJ41182.1| GTP-binding protein Era [Lactobacillus vaginalis ATCC 49540]
Length = 301
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 176/297 (59%), Gaps = 7/297 (2%)
Query: 110 HPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
+PN+KS ++G+PNVGKST N ++GQK++I++N QTTR++I GI + + Q++ D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTFLNYVVGQKVAIMSNVAQTTRNKIQGIYTTNDAQIVFID 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPG+ + + + D M K+ SA D ++ LV A + D+ + + + K PI
Sbjct: 63 TPGVHKPQTKLGD-FMEKSTLSALDEVDAVLYLVSATEDRGPGDDFIINRLKNVKQ--PI 119
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LV+NK D + P ++ + Y+ + P+SA G+ V + + ++ LP GP YY
Sbjct: 120 FLVINKIDQVNPNDLPEITAQYKDALPFAGIYPISALQGNNVSPLINKLIETLPNGPQYY 179
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P D +S+HPERF + E+IREK+F R EVP++ ++V S K I I+VE+
Sbjct: 180 PSDQISDHPERFVIAEMIREKVFELTRQEVPHSVAIDVTSVKREDDEHVHISANIIVERP 239
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGK G+ LK + T AR DIE L KV+L++ VKV +WR +LK YGY
Sbjct: 240 GQKGIIIGKKGQMLKKIGTKARQDIEHLLGDKVFLQLWVKVVPDWRDKSAMLKDYGY 296
>gi|157151336|ref|YP_001450014.1| GTP-binding protein Era [Streptococcus gordonii str. Challis
substr. CH1]
gi|3334174|sp|O24756.1|ERA_STRGC RecName: Full=GTPase Era
gi|2627217|dbj|BAA23582.1| GTP-binding protein [Streptococcus gordonii]
gi|157076130|gb|ABV10813.1| GTP-binding protein Era [Streptococcus gordonii str. Challis
substr. CH1]
Length = 299
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|289167813|ref|YP_003446082.1| GTPase/GTP-binding protein Era [Streptococcus mitis B6]
gi|288907380|emb|CBJ22217.1| GTPase/GTP-binding protein Era [Streptococcus mitis B6]
Length = 299
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|15900846|ref|NP_345450.1| GTP-binding protein Era [Streptococcus pneumoniae TIGR4]
gi|15902915|ref|NP_358465.1| GTP-binding protein Era [Streptococcus pneumoniae R6]
gi|111657969|ref|ZP_01408676.1| hypothetical protein SpneT_02000858 [Streptococcus pneumoniae
TIGR4]
gi|116516762|ref|YP_816339.1| GTP-binding protein Era [Streptococcus pneumoniae D39]
gi|148984711|ref|ZP_01817979.1| GTP-binding protein Era [Streptococcus pneumoniae SP3-BS71]
gi|148992896|ref|ZP_01822515.1| GTP-binding protein Era [Streptococcus pneumoniae SP9-BS68]
gi|148998595|ref|ZP_01826035.1| GTP-binding protein Era [Streptococcus pneumoniae SP11-BS70]
gi|149002520|ref|ZP_01827454.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS69]
gi|149010385|ref|ZP_01831756.1| GTP-binding protein Era [Streptococcus pneumoniae SP19-BS75]
gi|168483038|ref|ZP_02707990.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1873-00]
gi|168490212|ref|ZP_02714411.1| GTP-binding protein Era [Streptococcus pneumoniae SP195]
gi|168491058|ref|ZP_02715201.1| GTP-binding protein Era [Streptococcus pneumoniae CDC0288-04]
gi|168494398|ref|ZP_02718541.1| GTP-binding protein Era [Streptococcus pneumoniae CDC3059-06]
gi|168575631|ref|ZP_02721567.1| GTP-binding protein Era [Streptococcus pneumoniae MLV-016]
gi|182683915|ref|YP_001835662.1| GTP-binding protein Era [Streptococcus pneumoniae CGSP14]
gi|225856627|ref|YP_002738138.1| GTP-binding protein Era [Streptococcus pneumoniae P1031]
gi|225858762|ref|YP_002740272.1| GTP-binding protein Era [Streptococcus pneumoniae 70585]
gi|225861144|ref|YP_002742653.1| GTP-binding protein Era [Streptococcus pneumoniae Taiwan19F-14]
gi|237650882|ref|ZP_04525134.1| GTP-binding protein Era [Streptococcus pneumoniae CCRI 1974]
gi|237821333|ref|ZP_04597178.1| GTP-binding protein Era [Streptococcus pneumoniae CCRI 1974M2]
gi|298229555|ref|ZP_06963236.1| GTP-binding protein Era [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254476|ref|ZP_06978062.1| GTP-binding protein Era [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503021|ref|YP_003724961.1| GTP-binding protein Era [Streptococcus pneumoniae TCH8431/19A]
gi|303254436|ref|ZP_07340542.1| GTP-binding protein Era [Streptococcus pneumoniae BS455]
gi|303259881|ref|ZP_07345856.1| GTP-binding protein Era [Streptococcus pneumoniae SP-BS293]
gi|303262295|ref|ZP_07348239.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS292]
gi|303264717|ref|ZP_07350635.1| GTP-binding protein Era [Streptococcus pneumoniae BS397]
gi|303267324|ref|ZP_07353184.1| GTP-binding protein Era [Streptococcus pneumoniae BS457]
gi|303269129|ref|ZP_07354908.1| GTP-binding protein Era [Streptococcus pneumoniae BS458]
gi|307067626|ref|YP_003876592.1| GTPase [Streptococcus pneumoniae AP200]
gi|387757356|ref|YP_006064335.1| GTP-binding protein Era [Streptococcus pneumoniae OXC141]
gi|387759223|ref|YP_006066201.1| GTP-binding protein Era [Streptococcus pneumoniae INV200]
gi|387788359|ref|YP_006253427.1| GTP-binding protein Era [Streptococcus pneumoniae ST556]
gi|405761092|ref|YP_006701688.1| GTP-binding protein Era [Streptococcus pneumoniae SPNA45]
gi|410476410|ref|YP_006743169.1| GTP-binding protein Era [Streptococcus pneumoniae gamPNI0373]
gi|417312539|ref|ZP_12099251.1| GTP-binding protein Era [Streptococcus pneumoniae GA04375]
gi|417678923|ref|ZP_12328320.1| GTP-binding protein Era [Streptococcus pneumoniae GA17570]
gi|417686406|ref|ZP_12335684.1| GTP-binding protein Era [Streptococcus pneumoniae GA41301]
gi|417696160|ref|ZP_12345339.1| GTP-binding protein Era [Streptococcus pneumoniae GA47368]
gi|417698383|ref|ZP_12347556.1| GTP-binding protein Era [Streptococcus pneumoniae GA41317]
gi|418073753|ref|ZP_12711011.1| GTP-binding protein Era [Streptococcus pneumoniae GA11184]
gi|418076075|ref|ZP_12713314.1| GTP-binding protein Era [Streptococcus pneumoniae GA47502]
gi|418078462|ref|ZP_12715685.1| GTP-binding protein Era [Streptococcus pneumoniae 4027-06]
gi|418080426|ref|ZP_12717638.1| GTP-binding protein Era [Streptococcus pneumoniae 6735-05]
gi|418082894|ref|ZP_12720095.1| GTP-binding protein Era [Streptococcus pneumoniae GA44288]
gi|418085035|ref|ZP_12722219.1| GTP-binding protein Era [Streptococcus pneumoniae GA47281]
gi|418089365|ref|ZP_12726522.1| GTP-binding protein Era [Streptococcus pneumoniae GA43265]
gi|418091713|ref|ZP_12728855.1| GTP-binding protein Era [Streptococcus pneumoniae GA44452]
gi|418093797|ref|ZP_12730926.1| GTP-binding protein Era [Streptococcus pneumoniae GA49138]
gi|418098342|ref|ZP_12735441.1| GTP-binding protein Era [Streptococcus pneumoniae 6901-05]
gi|418100796|ref|ZP_12737882.1| GTP-binding protein Era [Streptococcus pneumoniae 7286-06]
gi|418105031|ref|ZP_12742090.1| GTP-binding protein Era [Streptococcus pneumoniae GA44500]
gi|418107362|ref|ZP_12744400.1| GTP-binding protein Era [Streptococcus pneumoniae GA41410]
gi|418109935|ref|ZP_12746960.1| GTP-binding protein Era [Streptococcus pneumoniae GA49447]
gi|418114468|ref|ZP_12751458.1| GTP-binding protein Era [Streptococcus pneumoniae 5787-06]
gi|418116708|ref|ZP_12753679.1| GTP-binding protein Era [Streptococcus pneumoniae 6963-05]
gi|418118740|ref|ZP_12755697.1| GTP-binding protein Era [Streptococcus pneumoniae GA18523]
gi|418121038|ref|ZP_12757984.1| GTP-binding protein Era [Streptococcus pneumoniae GA44194]
gi|418125595|ref|ZP_12762505.1| GTP-binding protein Era [Streptococcus pneumoniae GA44511]
gi|418130132|ref|ZP_12767016.1| GTP-binding protein Era [Streptococcus pneumoniae GA07643]
gi|418135030|ref|ZP_12771887.1| GTP-binding protein Era [Streptococcus pneumoniae GA11426]
gi|418139318|ref|ZP_12776148.1| GTP-binding protein Era [Streptococcus pneumoniae GA13338]
gi|418141556|ref|ZP_12778369.1| GTP-binding protein Era [Streptococcus pneumoniae GA13455]
gi|418143781|ref|ZP_12780581.1| GTP-binding protein Era [Streptococcus pneumoniae GA13494]
gi|418146191|ref|ZP_12782973.1| GTP-binding protein Era [Streptococcus pneumoniae GA13637]
gi|418148395|ref|ZP_12785160.1| GTP-binding protein Era [Streptococcus pneumoniae GA13856]
gi|418150434|ref|ZP_12787185.1| GTP-binding protein Era [Streptococcus pneumoniae GA14798]
gi|418152700|ref|ZP_12789440.1| GTP-binding protein Era [Streptococcus pneumoniae GA16121]
gi|418157564|ref|ZP_12794280.1| GTP-binding protein Era [Streptococcus pneumoniae GA16833]
gi|418159638|ref|ZP_12796337.1| GTP-binding protein Era [Streptococcus pneumoniae GA17227]
gi|418162020|ref|ZP_12798707.1| GTP-binding protein Era [Streptococcus pneumoniae GA17328]
gi|418164829|ref|ZP_12801499.1| GTP-binding protein Era [Streptococcus pneumoniae GA17371]
gi|418166596|ref|ZP_12803252.1| GTP-binding protein Era [Streptococcus pneumoniae GA17971]
gi|418169071|ref|ZP_12805715.1| GTP-binding protein Era [Streptococcus pneumoniae GA19077]
gi|418171435|ref|ZP_12808059.1| GTP-binding protein Era [Streptococcus pneumoniae GA19451]
gi|418173341|ref|ZP_12809955.1| GTP-binding protein Era [Streptococcus pneumoniae GA41277]
gi|418175786|ref|ZP_12812383.1| GTP-binding protein Era [Streptococcus pneumoniae GA41437]
gi|418180426|ref|ZP_12816997.1| GTP-binding protein Era [Streptococcus pneumoniae GA41688]
gi|418182599|ref|ZP_12819160.1| GTP-binding protein Era [Streptococcus pneumoniae GA43380]
gi|418186979|ref|ZP_12823508.1| GTP-binding protein Era [Streptococcus pneumoniae GA47360]
gi|418189205|ref|ZP_12825720.1| GTP-binding protein Era [Streptococcus pneumoniae GA47373]
gi|418191516|ref|ZP_12828020.1| GTP-binding protein Era [Streptococcus pneumoniae GA47388]
gi|418193599|ref|ZP_12830091.1| GTP-binding protein Era [Streptococcus pneumoniae GA47439]
gi|418196001|ref|ZP_12832480.1| GTP-binding protein Era [Streptococcus pneumoniae GA47688]
gi|418197793|ref|ZP_12834256.1| GTP-binding protein Era [Streptococcus pneumoniae GA47778]
gi|418200114|ref|ZP_12836559.1| GTP-binding protein Era [Streptococcus pneumoniae GA47976]
gi|418214143|ref|ZP_12840878.1| GTP-binding protein Era [Streptococcus pneumoniae GA54644]
gi|418216420|ref|ZP_12843144.1| GTP-binding protein Era [Streptococcus pneumoniae
Netherlands15B-37]
gi|418218714|ref|ZP_12845381.1| GTP-binding protein Era [Streptococcus pneumoniae NP127]
gi|418221022|ref|ZP_12847676.1| GTP-binding protein Era [Streptococcus pneumoniae GA47751]
gi|418223499|ref|ZP_12850139.1| GTP-binding protein Era [Streptococcus pneumoniae 5185-06]
gi|418227550|ref|ZP_12854169.1| GTP-binding protein Era [Streptococcus pneumoniae 3063-00]
gi|418229714|ref|ZP_12856320.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP01]
gi|418232038|ref|ZP_12858625.1| GTP-binding protein Era [Streptococcus pneumoniae GA07228]
gi|418234167|ref|ZP_12860746.1| GTP-binding protein Era [Streptococcus pneumoniae GA08780]
gi|418236477|ref|ZP_12863045.1| GTP-binding protein Era [Streptococcus pneumoniae GA19690]
gi|418238545|ref|ZP_12865100.1| GTP-binding protein Era [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422764|ref|ZP_13962980.1| GTP-binding protein Era [Streptococcus pneumoniae GA43264]
gi|419424992|ref|ZP_13965191.1| GTP-binding protein Era [Streptococcus pneumoniae 7533-05]
gi|419427364|ref|ZP_13967547.1| GTP-binding protein Era [Streptococcus pneumoniae 5652-06]
gi|419429127|ref|ZP_13969294.1| GTP-binding protein Era [Streptococcus pneumoniae GA11856]
gi|419431368|ref|ZP_13971513.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP05]
gi|419433571|ref|ZP_13973689.1| GTP-binding protein Era [Streptococcus pneumoniae GA40183]
gi|419435833|ref|ZP_13975926.1| GTP-binding protein Era [Streptococcus pneumoniae 8190-05]
gi|419438067|ref|ZP_13978137.1| GTP-binding protein Era [Streptococcus pneumoniae GA13499]
gi|419440188|ref|ZP_13980240.1| GTP-binding protein Era [Streptococcus pneumoniae GA40410]
gi|419442455|ref|ZP_13982486.1| GTP-binding protein Era [Streptococcus pneumoniae GA13224]
gi|419444816|ref|ZP_13984831.1| GTP-binding protein Era [Streptococcus pneumoniae GA19923]
gi|419446960|ref|ZP_13986965.1| GTP-binding protein Era [Streptococcus pneumoniae 7879-04]
gi|419448607|ref|ZP_13988604.1| GTP-binding protein Era [Streptococcus pneumoniae 4075-00]
gi|419451306|ref|ZP_13991292.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP02]
gi|419453343|ref|ZP_13993316.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP03]
gi|419457351|ref|ZP_13997296.1| GTP-binding protein Era [Streptococcus pneumoniae GA02254]
gi|419459813|ref|ZP_13999746.1| GTP-binding protein Era [Streptococcus pneumoniae GA02270]
gi|419462130|ref|ZP_14002040.1| GTP-binding protein Era [Streptococcus pneumoniae GA02714]
gi|419464185|ref|ZP_14004078.1| GTP-binding protein Era [Streptococcus pneumoniae GA04175]
gi|419470924|ref|ZP_14010783.1| GTP-binding protein Era [Streptococcus pneumoniae GA07914]
gi|419477633|ref|ZP_14017458.1| GTP-binding protein Era [Streptococcus pneumoniae GA18068]
gi|419481993|ref|ZP_14021786.1| GTP-binding protein Era [Streptococcus pneumoniae GA40563]
gi|419484165|ref|ZP_14023941.1| GTP-binding protein Era [Streptococcus pneumoniae GA43257]
gi|419489047|ref|ZP_14028797.1| GTP-binding protein Era [Streptococcus pneumoniae GA44386]
gi|419490885|ref|ZP_14030625.1| GTP-binding protein Era [Streptococcus pneumoniae GA47179]
gi|419497153|ref|ZP_14036863.1| GTP-binding protein Era [Streptococcus pneumoniae GA47522]
gi|419501696|ref|ZP_14041382.1| GTP-binding protein Era [Streptococcus pneumoniae GA47628]
gi|419503782|ref|ZP_14043451.1| GTP-binding protein Era [Streptococcus pneumoniae GA47760]
gi|419505903|ref|ZP_14045564.1| GTP-binding protein Era [Streptococcus pneumoniae GA49194]
gi|419508040|ref|ZP_14047693.1| GTP-binding protein Era [Streptococcus pneumoniae GA49542]
gi|419514523|ref|ZP_14054150.1| GTP-binding protein Era [Streptococcus pneumoniae England14-9]
gi|419518759|ref|ZP_14058366.1| GTP-binding protein Era [Streptococcus pneumoniae GA08825]
gi|419520898|ref|ZP_14060494.1| GTP-binding protein Era [Streptococcus pneumoniae GA05245]
gi|419523301|ref|ZP_14062881.1| GTP-binding protein Era [Streptococcus pneumoniae GA13723]
gi|419525717|ref|ZP_14065281.1| GTP-binding protein Era [Streptococcus pneumoniae GA14373]
gi|419527640|ref|ZP_14067183.1| GTP-binding protein Era [Streptococcus pneumoniae GA17719]
gi|419532195|ref|ZP_14071712.1| GTP-binding protein Era [Streptococcus pneumoniae GA47794]
gi|419534436|ref|ZP_14073939.1| GTP-binding protein Era [Streptococcus pneumoniae GA17457]
gi|421211073|ref|ZP_15668057.1| GTP-binding protein Era [Streptococcus pneumoniae 2070035]
gi|421217496|ref|ZP_15674397.1| GTP-binding protein Era [Streptococcus pneumoniae 2070335]
gi|421220119|ref|ZP_15676969.1| GTP-binding protein Era [Streptococcus pneumoniae 2070425]
gi|421222446|ref|ZP_15679237.1| GTP-binding protein Era [Streptococcus pneumoniae 2070531]
gi|421227133|ref|ZP_15683841.1| GTP-binding protein Era [Streptococcus pneumoniae 2072047]
gi|421231742|ref|ZP_15688387.1| GTP-binding protein Era [Streptococcus pneumoniae 2080076]
gi|421238601|ref|ZP_15695169.1| GTP-binding protein Era [Streptococcus pneumoniae 2071247]
gi|421240526|ref|ZP_15697073.1| GTP-binding protein Era [Streptococcus pneumoniae 2080913]
gi|421242917|ref|ZP_15699438.1| GTP-binding protein Era [Streptococcus pneumoniae 2081074]
gi|421244790|ref|ZP_15701291.1| GTP-binding protein Era [Streptococcus pneumoniae 2081685]
gi|421247230|ref|ZP_15703717.1| GTP-binding protein Era [Streptococcus pneumoniae 2082170]
gi|421265994|ref|ZP_15716877.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR27]
gi|421268173|ref|ZP_15719044.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR95]
gi|421270570|ref|ZP_15721426.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR48]
gi|421272623|ref|ZP_15723467.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR55]
gi|421274867|ref|ZP_15725699.1| GTP-binding protein Era [Streptococcus pneumoniae GA52612]
gi|421278745|ref|ZP_15729553.1| GTP-binding protein Era [Streptococcus pneumoniae GA17301]
gi|421280957|ref|ZP_15731755.1| GTP-binding protein Era [Streptococcus pneumoniae GA04672]
gi|421287685|ref|ZP_15738450.1| GTP-binding protein Era [Streptococcus pneumoniae GA58771]
gi|421294389|ref|ZP_15745112.1| GTP-binding protein Era [Streptococcus pneumoniae GA56113]
gi|421296037|ref|ZP_15746749.1| GTP-binding protein Era [Streptococcus pneumoniae GA58581]
gi|421300837|ref|ZP_15751507.1| GTP-binding protein Era [Streptococcus pneumoniae GA19998]
gi|421307244|ref|ZP_15757888.1| GTP-binding protein Era [Streptococcus pneumoniae GA60132]
gi|421309407|ref|ZP_15760034.1| GTP-binding protein Era [Streptococcus pneumoniae GA62681]
gi|421311711|ref|ZP_15762318.1| GTP-binding protein Era [Streptococcus pneumoniae GA58981]
gi|421314136|ref|ZP_15764726.1| GTP-binding protein Era [Streptococcus pneumoniae GA47562]
gi|444388419|ref|ZP_21186404.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS125219]
gi|444389898|ref|ZP_21187813.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS70012]
gi|444393380|ref|ZP_21191032.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS81218]
gi|444395869|ref|ZP_21193408.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0002]
gi|444397428|ref|ZP_21194911.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0006]
gi|444400519|ref|ZP_21197913.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0007]
gi|444401919|ref|ZP_21199098.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0008]
gi|444405242|ref|ZP_21202158.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0009]
gi|444408644|ref|ZP_21205277.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0010]
gi|444409452|ref|ZP_21206044.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0076]
gi|444411676|ref|ZP_21208004.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0153]
gi|444415963|ref|ZP_21212177.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0199]
gi|444418614|ref|ZP_21214585.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0360]
gi|444421221|ref|ZP_21216969.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0427]
gi|444422362|ref|ZP_21218019.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0446]
gi|61223691|sp|P0A3C3.1|ERA_STRPN RecName: Full=GTPase Era
gi|61223692|sp|P0A3C4.1|ERA_STRR6 RecName: Full=GTPase Era
gi|122278775|sp|Q04KV9.1|ERA_STRP2 RecName: Full=GTPase Era
gi|226741242|sp|B2IPC3.1|ERA_STRPS RecName: Full=GTPase Era
gi|254783665|sp|C1C6U6.1|ERA_STRP7 RecName: Full=GTPase Era
gi|254783669|sp|C1CK50.1|ERA_STRZP RecName: Full=GTPase Era
gi|254783670|sp|C1CRT1.1|ERA_STRZT RecName: Full=GTPase Era
gi|5305399|gb|AAD41632.1|AF072811_1 GTPase Era [Streptococcus pneumoniae]
gi|14972444|gb|AAK75090.1| GTP-binding protein Era [Streptococcus pneumoniae TIGR4]
gi|15458475|gb|AAK99675.1| GTPase/GTP-binding protein [Streptococcus pneumoniae R6]
gi|116077338|gb|ABJ55058.1| GTP-binding protein Era [Streptococcus pneumoniae D39]
gi|147755593|gb|EDK62640.1| GTP-binding protein Era [Streptococcus pneumoniae SP11-BS70]
gi|147759457|gb|EDK66449.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS69]
gi|147764866|gb|EDK71795.1| GTP-binding protein Era [Streptococcus pneumoniae SP19-BS75]
gi|147923102|gb|EDK74217.1| GTP-binding protein Era [Streptococcus pneumoniae SP3-BS71]
gi|147928348|gb|EDK79364.1| GTP-binding protein Era [Streptococcus pneumoniae SP9-BS68]
gi|172043458|gb|EDT51504.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1873-00]
gi|182629249|gb|ACB90197.1| GTP-binding protein Era [Streptococcus pneumoniae CGSP14]
gi|183571455|gb|EDT91983.1| GTP-binding protein Era [Streptococcus pneumoniae SP195]
gi|183574573|gb|EDT95101.1| GTP-binding protein Era [Streptococcus pneumoniae CDC0288-04]
gi|183575685|gb|EDT96213.1| GTP-binding protein Era [Streptococcus pneumoniae CDC3059-06]
gi|183578605|gb|EDT99133.1| GTP-binding protein Era [Streptococcus pneumoniae MLV-016]
gi|225720717|gb|ACO16571.1| GTP-binding protein Era [Streptococcus pneumoniae 70585]
gi|225725237|gb|ACO21089.1| GTP-binding protein Era [Streptococcus pneumoniae P1031]
gi|225726867|gb|ACO22718.1| GTP-binding protein Era [Streptococcus pneumoniae Taiwan19F-14]
gi|298238616|gb|ADI69747.1| GTP-binding protein Era [Streptococcus pneumoniae TCH8431/19A]
gi|301799945|emb|CBW32528.1| GTP-binding protein Era homolog [Streptococcus pneumoniae OXC141]
gi|301801812|emb|CBW34523.1| GTP-binding protein Era homolog [Streptococcus pneumoniae INV200]
gi|302598603|gb|EFL65643.1| GTP-binding protein Era [Streptococcus pneumoniae BS455]
gi|302636618|gb|EFL67109.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS292]
gi|302639086|gb|EFL69546.1| GTP-binding protein Era [Streptococcus pneumoniae SP-BS293]
gi|302641316|gb|EFL71684.1| GTP-binding protein Era [Streptococcus pneumoniae BS458]
gi|302643134|gb|EFL73421.1| GTP-binding protein Era [Streptococcus pneumoniae BS457]
gi|302645804|gb|EFL76033.1| GTP-binding protein Era [Streptococcus pneumoniae BS397]
gi|306409163|gb|ADM84590.1| GTPase [Streptococcus pneumoniae AP200]
gi|327389247|gb|EGE87592.1| GTP-binding protein Era [Streptococcus pneumoniae GA04375]
gi|332073302|gb|EGI83781.1| GTP-binding protein Era [Streptococcus pneumoniae GA17570]
gi|332076243|gb|EGI86709.1| GTP-binding protein Era [Streptococcus pneumoniae GA41301]
gi|332201435|gb|EGJ15505.1| GTP-binding protein Era [Streptococcus pneumoniae GA47368]
gi|332202824|gb|EGJ16893.1| GTP-binding protein Era [Streptococcus pneumoniae GA41317]
gi|353747653|gb|EHD28309.1| GTP-binding protein Era [Streptococcus pneumoniae 4027-06]
gi|353749864|gb|EHD30507.1| GTP-binding protein Era [Streptococcus pneumoniae GA47502]
gi|353750600|gb|EHD31238.1| GTP-binding protein Era [Streptococcus pneumoniae GA11184]
gi|353752966|gb|EHD33590.1| GTP-binding protein Era [Streptococcus pneumoniae 6735-05]
gi|353756807|gb|EHD37406.1| GTP-binding protein Era [Streptococcus pneumoniae GA44288]
gi|353758730|gb|EHD39318.1| GTP-binding protein Era [Streptococcus pneumoniae GA47281]
gi|353762051|gb|EHD42614.1| GTP-binding protein Era [Streptococcus pneumoniae GA43265]
gi|353763813|gb|EHD44363.1| GTP-binding protein Era [Streptococcus pneumoniae GA44452]
gi|353765673|gb|EHD46215.1| GTP-binding protein Era [Streptococcus pneumoniae GA49138]
gi|353769702|gb|EHD50218.1| GTP-binding protein Era [Streptococcus pneumoniae 6901-05]
gi|353772732|gb|EHD53237.1| GTP-binding protein Era [Streptococcus pneumoniae 7286-06]
gi|353778101|gb|EHD58571.1| GTP-binding protein Era [Streptococcus pneumoniae GA44500]
gi|353779545|gb|EHD60009.1| GTP-binding protein Era [Streptococcus pneumoniae GA41410]
gi|353782847|gb|EHD63277.1| GTP-binding protein Era [Streptococcus pneumoniae GA49447]
gi|353787210|gb|EHD67617.1| GTP-binding protein Era [Streptococcus pneumoniae 5787-06]
gi|353789685|gb|EHD70077.1| GTP-binding protein Era [Streptococcus pneumoniae 6963-05]
gi|353790692|gb|EHD71073.1| GTP-binding protein Era [Streptococcus pneumoniae GA18523]
gi|353793865|gb|EHD74224.1| GTP-binding protein Era [Streptococcus pneumoniae GA44194]
gi|353797561|gb|EHD77894.1| GTP-binding protein Era [Streptococcus pneumoniae GA44511]
gi|353803424|gb|EHD83716.1| GTP-binding protein Era [Streptococcus pneumoniae GA07643]
gi|353805807|gb|EHD86081.1| GTP-binding protein Era [Streptococcus pneumoniae GA13455]
gi|353809522|gb|EHD89782.1| GTP-binding protein Era [Streptococcus pneumoniae GA13494]
gi|353813070|gb|EHD93303.1| GTP-binding protein Era [Streptococcus pneumoniae GA13856]
gi|353814987|gb|EHD95209.1| GTP-binding protein Era [Streptococcus pneumoniae GA13637]
gi|353815942|gb|EHD96154.1| GTP-binding protein Era [Streptococcus pneumoniae GA14798]
gi|353819345|gb|EHD99543.1| GTP-binding protein Era [Streptococcus pneumoniae GA16121]
gi|353821371|gb|EHE01547.1| GTP-binding protein Era [Streptococcus pneumoniae GA17227]
gi|353824012|gb|EHE04186.1| GTP-binding protein Era [Streptococcus pneumoniae GA16833]
gi|353828403|gb|EHE08543.1| GTP-binding protein Era [Streptococcus pneumoniae GA17328]
gi|353829690|gb|EHE09821.1| GTP-binding protein Era [Streptococcus pneumoniae GA17371]
gi|353830192|gb|EHE10322.1| GTP-binding protein Era [Streptococcus pneumoniae GA17971]
gi|353834913|gb|EHE15009.1| GTP-binding protein Era [Streptococcus pneumoniae GA19077]
gi|353835172|gb|EHE15266.1| GTP-binding protein Era [Streptococcus pneumoniae GA19451]
gi|353840040|gb|EHE20114.1| GTP-binding protein Era [Streptococcus pneumoniae GA41277]
gi|353842354|gb|EHE22401.1| GTP-binding protein Era [Streptococcus pneumoniae GA41437]
gi|353846038|gb|EHE26076.1| GTP-binding protein Era [Streptococcus pneumoniae GA41688]
gi|353850836|gb|EHE30840.1| GTP-binding protein Era [Streptococcus pneumoniae GA43380]
gi|353852804|gb|EHE32790.1| GTP-binding protein Era [Streptococcus pneumoniae GA47360]
gi|353856347|gb|EHE36316.1| GTP-binding protein Era [Streptococcus pneumoniae GA47373]
gi|353857417|gb|EHE37380.1| GTP-binding protein Era [Streptococcus pneumoniae GA47388]
gi|353859579|gb|EHE39529.1| GTP-binding protein Era [Streptococcus pneumoniae GA47439]
gi|353861452|gb|EHE41389.1| GTP-binding protein Era [Streptococcus pneumoniae GA47688]
gi|353863949|gb|EHE43868.1| GTP-binding protein Era [Streptococcus pneumoniae GA47778]
gi|353865161|gb|EHE45070.1| GTP-binding protein Era [Streptococcus pneumoniae GA47976]
gi|353871426|gb|EHE51297.1| GTP-binding protein Era [Streptococcus pneumoniae GA54644]
gi|353873471|gb|EHE53332.1| GTP-binding protein Era [Streptococcus pneumoniae
Netherlands15B-37]
gi|353875369|gb|EHE55221.1| GTP-binding protein Era [Streptococcus pneumoniae NP127]
gi|353875945|gb|EHE55795.1| GTP-binding protein Era [Streptococcus pneumoniae GA47751]
gi|353878297|gb|EHE58127.1| GTP-binding protein Era [Streptococcus pneumoniae 5185-06]
gi|353883151|gb|EHE62960.1| GTP-binding protein Era [Streptococcus pneumoniae 3063-00]
gi|353886765|gb|EHE66545.1| GTP-binding protein Era [Streptococcus pneumoniae GA07228]
gi|353888412|gb|EHE68186.1| GTP-binding protein Era [Streptococcus pneumoniae GA08780]
gi|353889620|gb|EHE69390.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP01]
gi|353892709|gb|EHE72457.1| GTP-binding protein Era [Streptococcus pneumoniae GA19690]
gi|353894295|gb|EHE74037.1| GTP-binding protein Era [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353902267|gb|EHE77797.1| GTP-binding protein Era [Streptococcus pneumoniae GA11426]
gi|353905561|gb|EHE80984.1| GTP-binding protein Era [Streptococcus pneumoniae GA13338]
gi|379138101|gb|AFC94892.1| GTP-binding protein Era [Streptococcus pneumoniae ST556]
gi|379532349|gb|EHY97578.1| GTP-binding protein Era [Streptococcus pneumoniae GA02254]
gi|379532839|gb|EHY98063.1| GTP-binding protein Era [Streptococcus pneumoniae GA02270]
gi|379532976|gb|EHY98199.1| GTP-binding protein Era [Streptococcus pneumoniae GA02714]
gi|379538072|gb|EHZ03253.1| GTP-binding protein Era [Streptococcus pneumoniae GA13499]
gi|379539404|gb|EHZ04583.1| GTP-binding protein Era [Streptococcus pneumoniae GA04175]
gi|379539912|gb|EHZ05089.1| GTP-binding protein Era [Streptococcus pneumoniae GA05245]
gi|379545640|gb|EHZ10779.1| GTP-binding protein Era [Streptococcus pneumoniae GA07914]
gi|379551075|gb|EHZ16170.1| GTP-binding protein Era [Streptococcus pneumoniae GA11856]
gi|379554422|gb|EHZ19502.1| GTP-binding protein Era [Streptococcus pneumoniae GA13224]
gi|379558032|gb|EHZ23069.1| GTP-binding protein Era [Streptococcus pneumoniae GA13723]
gi|379559191|gb|EHZ24221.1| GTP-binding protein Era [Streptococcus pneumoniae GA14373]
gi|379565170|gb|EHZ30163.1| GTP-binding protein Era [Streptococcus pneumoniae GA17457]
gi|379565793|gb|EHZ30784.1| GTP-binding protein Era [Streptococcus pneumoniae GA17719]
gi|379567015|gb|EHZ32002.1| GTP-binding protein Era [Streptococcus pneumoniae GA18068]
gi|379572509|gb|EHZ37466.1| GTP-binding protein Era [Streptococcus pneumoniae GA19923]
gi|379576572|gb|EHZ41496.1| GTP-binding protein Era [Streptococcus pneumoniae GA40183]
gi|379579955|gb|EHZ44851.1| GTP-binding protein Era [Streptococcus pneumoniae GA40410]
gi|379580867|gb|EHZ45756.1| GTP-binding protein Era [Streptococcus pneumoniae GA40563]
gi|379583676|gb|EHZ48553.1| GTP-binding protein Era [Streptococcus pneumoniae GA43257]
gi|379587940|gb|EHZ52787.1| GTP-binding protein Era [Streptococcus pneumoniae GA44386]
gi|379588222|gb|EHZ53067.1| GTP-binding protein Era [Streptococcus pneumoniae GA43264]
gi|379594464|gb|EHZ59274.1| GTP-binding protein Era [Streptococcus pneumoniae GA47179]
gi|379601146|gb|EHZ65922.1| GTP-binding protein Era [Streptococcus pneumoniae GA47522]
gi|379602057|gb|EHZ66829.1| GTP-binding protein Era [Streptococcus pneumoniae GA47628]
gi|379606365|gb|EHZ71113.1| GTP-binding protein Era [Streptococcus pneumoniae GA47794]
gi|379606459|gb|EHZ71206.1| GTP-binding protein Era [Streptococcus pneumoniae GA47760]
gi|379607817|gb|EHZ72563.1| GTP-binding protein Era [Streptococcus pneumoniae GA49194]
gi|379611758|gb|EHZ76480.1| GTP-binding protein Era [Streptococcus pneumoniae GA49542]
gi|379614500|gb|EHZ79210.1| GTP-binding protein Era [Streptococcus pneumoniae 7879-04]
gi|379615968|gb|EHZ80669.1| GTP-binding protein Era [Streptococcus pneumoniae 8190-05]
gi|379618817|gb|EHZ83492.1| GTP-binding protein Era [Streptococcus pneumoniae 5652-06]
gi|379620321|gb|EHZ84980.1| GTP-binding protein Era [Streptococcus pneumoniae 7533-05]
gi|379623011|gb|EHZ87645.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP02]
gi|379623665|gb|EHZ88298.1| GTP-binding protein Era [Streptococcus pneumoniae 4075-00]
gi|379627052|gb|EHZ91668.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP03]
gi|379630734|gb|EHZ95315.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP05]
gi|379637619|gb|EIA02172.1| GTP-binding protein Era [Streptococcus pneumoniae England14-9]
gi|379641738|gb|EIA06273.1| GTP-binding protein Era [Streptococcus pneumoniae GA08825]
gi|395573796|gb|EJG34383.1| GTP-binding protein Era [Streptococcus pneumoniae 2070035]
gi|395584982|gb|EJG45374.1| GTP-binding protein Era [Streptococcus pneumoniae 2070335]
gi|395588396|gb|EJG48726.1| GTP-binding protein Era [Streptococcus pneumoniae 2070425]
gi|395588614|gb|EJG48942.1| GTP-binding protein Era [Streptococcus pneumoniae 2070531]
gi|395595960|gb|EJG56184.1| GTP-binding protein Era [Streptococcus pneumoniae 2072047]
gi|395596232|gb|EJG56454.1| GTP-binding protein Era [Streptococcus pneumoniae 2080076]
gi|395602081|gb|EJG62225.1| GTP-binding protein Era [Streptococcus pneumoniae 2071247]
gi|395609108|gb|EJG69198.1| GTP-binding protein Era [Streptococcus pneumoniae 2080913]
gi|395609290|gb|EJG69377.1| GTP-binding protein Era [Streptococcus pneumoniae 2081685]
gi|395609616|gb|EJG69702.1| GTP-binding protein Era [Streptococcus pneumoniae 2081074]
gi|395614866|gb|EJG74884.1| GTP-binding protein Era [Streptococcus pneumoniae 2082170]
gi|395868365|gb|EJG79483.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR48]
gi|395868730|gb|EJG79847.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR27]
gi|395871089|gb|EJG82200.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR95]
gi|395875595|gb|EJG86676.1| GTP-binding protein Era [Streptococcus pneumoniae GA52612]
gi|395875732|gb|EJG86810.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR55]
gi|395880178|gb|EJG91231.1| GTP-binding protein Era [Streptococcus pneumoniae GA17301]
gi|395882118|gb|EJG93165.1| GTP-binding protein Era [Streptococcus pneumoniae GA04672]
gi|395888297|gb|EJG99309.1| GTP-binding protein Era [Streptococcus pneumoniae GA58771]
gi|395894679|gb|EJH05659.1| GTP-binding protein Era [Streptococcus pneumoniae GA56113]
gi|395897250|gb|EJH08214.1| GTP-binding protein Era [Streptococcus pneumoniae GA58581]
gi|395898397|gb|EJH09341.1| GTP-binding protein Era [Streptococcus pneumoniae GA19998]
gi|395907851|gb|EJH18736.1| GTP-binding protein Era [Streptococcus pneumoniae GA60132]
gi|395910828|gb|EJH21697.1| GTP-binding protein Era [Streptococcus pneumoniae GA62681]
gi|395912289|gb|EJH23152.1| GTP-binding protein Era [Streptococcus pneumoniae GA58981]
gi|395914636|gb|EJH25480.1| GTP-binding protein Era [Streptococcus pneumoniae GA47562]
gi|404277981|emb|CCM08552.1| GTP-binding protein Era [Streptococcus pneumoniae SPNA45]
gi|406369355|gb|AFS43045.1| GTP-binding protein Era [Streptococcus pneumoniae gamPNI0373]
gi|429319324|emb|CCP32579.1| GTP-binding protein Era homolog [Streptococcus pneumoniae
SPN034183]
gi|429321140|emb|CCP34553.1| GTP-binding protein Era homolog [Streptococcus pneumoniae
SPN994039]
gi|429322960|emb|CCP30594.1| GTP-binding protein Era homolog [Streptococcus pneumoniae
SPN994038]
gi|444249476|gb|ELU55966.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS125219]
gi|444255870|gb|ELU62210.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0002]
gi|444256361|gb|ELU62699.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS70012]
gi|444260085|gb|ELU66393.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0006]
gi|444261036|gb|ELU67343.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS81218]
gi|444266107|gb|ELU72079.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0007]
gi|444267390|gb|ELU73295.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0008]
gi|444269471|gb|ELU75278.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0010]
gi|444274913|gb|ELU80553.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0009]
gi|444275573|gb|ELU81195.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0153]
gi|444278546|gb|ELU83988.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0199]
gi|444279490|gb|ELU84886.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0076]
gi|444281043|gb|ELU86379.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0360]
gi|444282944|gb|ELU88166.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0427]
gi|444288292|gb|ELU93189.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0446]
Length = 299
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|262408119|ref|ZP_06084666.1| GTP-binding protein Era [Bacteroides sp. 2_1_22]
gi|293369491|ref|ZP_06616070.1| GTP-binding protein Era [Bacteroides ovatus SD CMC 3f]
gi|294644224|ref|ZP_06721994.1| GTP-binding protein Era [Bacteroides ovatus SD CC 2a]
gi|294808598|ref|ZP_06767338.1| GTP-binding protein Era [Bacteroides xylanisolvens SD CC 1b]
gi|336403749|ref|ZP_08584458.1| GTP-binding protein Era [Bacteroides sp. 1_1_30]
gi|345508909|ref|ZP_08788527.1| GTP-binding protein Era [Bacteroides sp. D1]
gi|423211943|ref|ZP_17198472.1| GTP-binding protein Era [Bacteroides xylanisolvens CL03T12C04]
gi|229447221|gb|EEO53012.1| GTP-binding protein Era [Bacteroides sp. D1]
gi|262353671|gb|EEZ02764.1| GTP-binding protein Era [Bacteroides sp. 2_1_22]
gi|292635376|gb|EFF53889.1| GTP-binding protein Era [Bacteroides ovatus SD CMC 3f]
gi|292640434|gb|EFF58682.1| GTP-binding protein Era [Bacteroides ovatus SD CC 2a]
gi|294444197|gb|EFG12924.1| GTP-binding protein Era [Bacteroides xylanisolvens SD CC 1b]
gi|295088053|emb|CBK69576.1| GTP-binding protein Era [Bacteroides xylanisolvens XB1A]
gi|335945103|gb|EGN06919.1| GTP-binding protein Era [Bacteroides sp. 1_1_30]
gi|392695307|gb|EIY88530.1| GTP-binding protein Era [Bacteroides xylanisolvens CL03T12C04]
Length = 293
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 183/288 (63%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMEKV---RQMTVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVKLVEDWKELLPQAEIIPISATSKFNVDYVMKRIKELLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K P K I+ I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEEFKEEP-KKIHIRAVINVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR ++E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRELERFFGKTIFLETYVKVDKDWRSSDKELRNFGY 290
>gi|317969119|ref|ZP_07970509.1| GTP-binding protein Era-like protein [Synechococcus sp. CB0205]
Length = 327
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 182/330 (55%), Gaps = 12/330 (3%)
Query: 78 DDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLS 137
D LS+ P MA + + + +++G+PNVGKSTL NQ++G+K++
Sbjct: 5 DQLPPLPDLSDLPAEAMAG--GFSLGQSPEGFRSGFVALVGRPNVGKSTLMNQLVGEKVA 62
Query: 138 IVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVV 197
I + QTTR+R+ I + P Q++L DTPGI K H+L +++ R A D +++
Sbjct: 63 ITSPVAQTTRNRLRAILTTPTAQLVLVDTPGI-HKPHHLLGERLVQTARGAIGEVDQVLL 121
Query: 198 LVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVI 257
LVD +A R D + E + + K+P+ + LNK DL+ P + A+ Y + +
Sbjct: 122 LVDGSQAAGRGDGFIVELL--ERIKVPVQVALNKSDLVDPAQAAELEASYRELVPGWPLH 179
Query: 258 PVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPY 317
PVSA G G E + + +LP GP YP D VS+ PE+ + E+IRE++ R E+P+
Sbjct: 180 PVSALNGEGTEALVSALAAELPEGPHLYPPDAVSDQPEQLLLAELIREQVLQHTREEIPH 239
Query: 318 ACQVN---VVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFL 374
+ V VV K R TA + ++VE+NSQK ILIGKGG L+ + T AR ++ +
Sbjct: 240 SVAVQIERVVDDKER-TA---VLATVLVERNSQKGILIGKGGSMLRQIGTGARQQMQKLI 295
Query: 375 QKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
VYLE+ VKV NWR++ L GY G
Sbjct: 296 AGPVYLELFVKVVPNWRRNSSRLAELGYRG 325
>gi|149006354|ref|ZP_01830066.1| GTP-binding protein Era [Streptococcus pneumoniae SP18-BS74]
gi|169834294|ref|YP_001694414.1| GTP-binding protein Era [Streptococcus pneumoniae Hungary19A-6]
gi|221231732|ref|YP_002510884.1| GTP-binding protein Era homolog [Streptococcus pneumoniae ATCC
700669]
gi|307127480|ref|YP_003879511.1| GTP-binding protein Era [Streptococcus pneumoniae 670-6B]
gi|307704699|ref|ZP_07641598.1| GTP-binding protein Era [Streptococcus mitis SK597]
gi|307706467|ref|ZP_07643276.1| GTP-binding protein Era [Streptococcus mitis SK321]
gi|322376464|ref|ZP_08050957.1| GTP-binding protein Era [Streptococcus sp. M334]
gi|415698176|ref|ZP_11457087.1| GTP-binding protein Era [Streptococcus pneumoniae 459-5]
gi|415749371|ref|ZP_11477315.1| GTP-binding protein Era [Streptococcus pneumoniae SV35]
gi|415752055|ref|ZP_11479166.1| GTP-binding protein Era [Streptococcus pneumoniae SV36]
gi|417676725|ref|ZP_12326136.1| GTP-binding protein Era [Streptococcus pneumoniae GA17545]
gi|417923311|ref|ZP_12566780.1| GTP-binding protein Era [Streptococcus mitis SK569]
gi|418096083|ref|ZP_12733198.1| GTP-binding protein Era [Streptococcus pneumoniae GA16531]
gi|418112324|ref|ZP_12749326.1| GTP-binding protein Era [Streptococcus pneumoniae GA41538]
gi|418123243|ref|ZP_12760177.1| GTP-binding protein Era [Streptococcus pneumoniae GA44378]
gi|418127829|ref|ZP_12764725.1| GTP-binding protein Era [Streptococcus pneumoniae NP170]
gi|418132811|ref|ZP_12769684.1| GTP-binding protein Era [Streptococcus pneumoniae GA11304]
gi|418137004|ref|ZP_12773846.1| GTP-binding protein Era [Streptococcus pneumoniae GA11663]
gi|418155006|ref|ZP_12791737.1| GTP-binding protein Era [Streptococcus pneumoniae GA16242]
gi|418178001|ref|ZP_12814585.1| GTP-binding protein Era [Streptococcus pneumoniae GA41565]
gi|418225394|ref|ZP_12852023.1| GTP-binding protein Era [Streptococcus pneumoniae NP112]
gi|418977671|ref|ZP_13525485.1| GTP-binding protein Era [Streptococcus mitis SK575]
gi|419466412|ref|ZP_14006295.1| GTP-binding protein Era [Streptococcus pneumoniae GA05248]
gi|419473034|ref|ZP_14012885.1| GTP-binding protein Era [Streptococcus pneumoniae GA13430]
gi|419493105|ref|ZP_14032832.1| GTP-binding protein Era [Streptococcus pneumoniae GA47210]
gi|419495286|ref|ZP_14035004.1| GTP-binding protein Era [Streptococcus pneumoniae GA47461]
gi|419512365|ref|ZP_14051999.1| GTP-binding protein Era [Streptococcus pneumoniae GA05578]
gi|419516645|ref|ZP_14056263.1| GTP-binding protein Era [Streptococcus pneumoniae GA02506]
gi|419767482|ref|ZP_14293635.1| GTP-binding protein Era [Streptococcus mitis SK579]
gi|421233957|ref|ZP_15690579.1| GTP-binding protein Era [Streptococcus pneumoniae 2061617]
gi|421249264|ref|ZP_15705726.1| GTP-binding protein Era [Streptococcus pneumoniae 2082239]
gi|421283159|ref|ZP_15733946.1| GTP-binding protein Era [Streptococcus pneumoniae GA04216]
gi|421289600|ref|ZP_15740351.1| GTP-binding protein Era [Streptococcus pneumoniae GA54354]
gi|421298436|ref|ZP_15749124.1| GTP-binding protein Era [Streptococcus pneumoniae GA60080]
gi|421303187|ref|ZP_15753851.1| GTP-binding protein Era [Streptococcus pneumoniae GA17484]
gi|421304919|ref|ZP_15755575.1| GTP-binding protein Era [Streptococcus pneumoniae GA62331]
gi|226741241|sp|B1IBC9.1|ERA_STRPI RecName: Full=GTPase Era
gi|254783666|sp|B8ZP66.1|ERA_STRPJ RecName: Full=GTPase Era
gi|147762131|gb|EDK69093.1| GTP-binding protein Era [Streptococcus pneumoniae SP18-BS74]
gi|168996796|gb|ACA37408.1| GTP-binding protein Era [Streptococcus pneumoniae Hungary19A-6]
gi|220674192|emb|CAR68720.1| GTP-binding protein Era homolog [Streptococcus pneumoniae ATCC
700669]
gi|306484542|gb|ADM91411.1| GTP-binding protein Era [Streptococcus pneumoniae 670-6B]
gi|307618177|gb|EFN97335.1| GTP-binding protein Era [Streptococcus mitis SK321]
gi|307621746|gb|EFO00784.1| GTP-binding protein Era [Streptococcus mitis SK597]
gi|321282271|gb|EFX59278.1| GTP-binding protein Era [Streptococcus sp. M334]
gi|332075585|gb|EGI86053.1| GTP-binding protein Era [Streptococcus pneumoniae GA17545]
gi|342837115|gb|EGU71314.1| GTP-binding protein Era [Streptococcus mitis SK569]
gi|353771070|gb|EHD51581.1| GTP-binding protein Era [Streptococcus pneumoniae GA16531]
gi|353784190|gb|EHD64611.1| GTP-binding protein Era [Streptococcus pneumoniae GA41538]
gi|353797330|gb|EHD77665.1| GTP-binding protein Era [Streptococcus pneumoniae GA44378]
gi|353800290|gb|EHD80604.1| GTP-binding protein Era [Streptococcus pneumoniae NP170]
gi|353806767|gb|EHD87040.1| GTP-binding protein Era [Streptococcus pneumoniae GA11304]
gi|353823298|gb|EHE03473.1| GTP-binding protein Era [Streptococcus pneumoniae GA16242]
gi|353844775|gb|EHE24818.1| GTP-binding protein Era [Streptococcus pneumoniae GA41565]
gi|353882702|gb|EHE62513.1| GTP-binding protein Era [Streptococcus pneumoniae NP112]
gi|353901631|gb|EHE77163.1| GTP-binding protein Era [Streptococcus pneumoniae GA11663]
gi|379544535|gb|EHZ09679.1| GTP-binding protein Era [Streptococcus pneumoniae GA05248]
gi|379552541|gb|EHZ17630.1| GTP-binding protein Era [Streptococcus pneumoniae GA13430]
gi|379595143|gb|EHZ59952.1| GTP-binding protein Era [Streptococcus pneumoniae GA47210]
gi|379595368|gb|EHZ60176.1| GTP-binding protein Era [Streptococcus pneumoniae GA47461]
gi|379636835|gb|EIA01393.1| GTP-binding protein Era [Streptococcus pneumoniae GA05578]
gi|379640648|gb|EIA05187.1| GTP-binding protein Era [Streptococcus pneumoniae GA02506]
gi|381309751|gb|EIC50584.1| GTP-binding protein Era [Streptococcus pneumoniae SV36]
gi|381317181|gb|EIC57911.1| GTP-binding protein Era [Streptococcus pneumoniae 459-5]
gi|381317665|gb|EIC58390.1| GTP-binding protein Era [Streptococcus pneumoniae SV35]
gi|383349639|gb|EID27568.1| GTP-binding protein Era [Streptococcus mitis SK575]
gi|383353025|gb|EID30652.1| GTP-binding protein Era [Streptococcus mitis SK579]
gi|395602854|gb|EJG62996.1| GTP-binding protein Era [Streptococcus pneumoniae 2061617]
gi|395614565|gb|EJG74584.1| GTP-binding protein Era [Streptococcus pneumoniae 2082239]
gi|395881122|gb|EJG92171.1| GTP-binding protein Era [Streptococcus pneumoniae GA04216]
gi|395888841|gb|EJG99851.1| GTP-binding protein Era [Streptococcus pneumoniae GA54354]
gi|395901809|gb|EJH12745.1| GTP-binding protein Era [Streptococcus pneumoniae GA17484]
gi|395902392|gb|EJH13325.1| GTP-binding protein Era [Streptococcus pneumoniae GA60080]
gi|395905581|gb|EJH16486.1| GTP-binding protein Era [Streptococcus pneumoniae GA62331]
Length = 299
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|327312577|ref|YP_004328014.1| ribosome biogenesis GTPase Era [Prevotella denticola F0289]
gi|326944896|gb|AEA20781.1| ribosome biogenesis GTPase Era [Prevotella denticola F0289]
Length = 293
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 177/290 (61%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADVLLYVTDVVENPEKNMDFLEKVA---KMTIPVILLINKIDE 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ + +E W+ D E++P+SAK G + + + LP PA++ KD +++
Sbjct: 124 SDQSKLVELVEKWHGLLPDA-EILPISAKNKFGTDILMKRVRELLPESPAFFDKDQLTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
P RFFV EIIREKI Y E+PY+ +V V +K + I I VE++SQK I+IG
Sbjct: 183 PARFFVSEIIREKILRYYDKEIPYSVEVVVERFK-EDDRQIHINAVIYVERSSQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + T AR +E F KK++LE VKV ++WR + L ++GY
Sbjct: 242 HQGMALKKMLTEARKSLERFFDKKIFLETFVKVDKDWRNSQKELNNFGYN 291
>gi|150009039|ref|YP_001303782.1| GTP-binding protein Era [Parabacteroides distasonis ATCC 8503]
gi|262383938|ref|ZP_06077074.1| GTP-binding protein Era [Bacteroides sp. 2_1_33B]
gi|298375726|ref|ZP_06985682.1| GTP-binding protein Era [Bacteroides sp. 3_1_19]
gi|301312103|ref|ZP_07218025.1| GTP-binding protein Era [Bacteroides sp. 20_3]
gi|149937463|gb|ABR44160.1| GTP-binding protein Era [Parabacteroides distasonis ATCC 8503]
gi|262294836|gb|EEY82768.1| GTP-binding protein Era [Bacteroides sp. 2_1_33B]
gi|298266763|gb|EFI08420.1| GTP-binding protein Era [Bacteroides sp. 3_1_19]
gi|300830205|gb|EFK60853.1| GTP-binding protein Era [Bacteroides sp. 20_3]
Length = 296
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 184/294 (62%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + +SM+ + + G +AD ++ + D + ++ +E L + P+LL+
Sbjct: 65 VLRPNYKLQESMLNFSQSALG-DADVLLYVTDVVETIDKNNEFLARV---QSIECPVLLL 120
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDQTNQPELEKLVAQWKELLPKAEIIPISALSNFNIDYVKRRVEELMPDSPPYFEKD 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE+++QK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEDDELIH-IKALIIVERDTQK 239
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG G+ALK + AR DIE F KKV+LE+ VKV+++WR + +LK++GY
Sbjct: 240 GIIIGHQGQALKKVGAMARKDIERFFGKKVFLEMFVKVEKDWRNRDNILKNFGY 293
>gi|261418494|ref|YP_003252176.1| GTP-binding protein Era [Geobacillus sp. Y412MC61]
gi|297529346|ref|YP_003670621.1| GTP-binding protein Era [Geobacillus sp. C56-T3]
gi|319767545|ref|YP_004133046.1| GTP-binding protein Era [Geobacillus sp. Y412MC52]
gi|261374951|gb|ACX77694.1| GTP-binding protein Era [Geobacillus sp. Y412MC61]
gi|297252598|gb|ADI26044.1| GTP-binding protein Era [Geobacillus sp. C56-T3]
gi|317112411|gb|ADU94903.1| GTP-binding protein Era [Geobacillus sp. Y412MC52]
Length = 302
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG+ + K
Sbjct: 12 AIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTPGVHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L MMK +A D I+ +V+A + R + + E + + P+ LV+NK D
Sbjct: 71 HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDT--PVFLVINKIDR 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P E+ ++ Y+ E++P+SA G+ V+ + + I +LP GP YYP D +++HP
Sbjct: 129 VHPDELLPLIDRYKDLYPFAEIVPISALEGNNVDRLLEQIKERLPEGPQYYPPDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
E+F + E+IREK R EVP++ V V + R + +I IVVE++SQK I+IG
Sbjct: 189 EQFIIAELIREKALHLTREEVPHSIAVVVERIERREGSGTVYISAVIVVERDSQKGIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR DIE L +V+LE+ VKV+++WR L+ +G+
Sbjct: 249 KQGRMLKEIGQRARADIEALLGSRVFLELWVKVQKDWRNRLSQLRDFGF 297
>gi|421206421|ref|ZP_15663482.1| GTP-binding protein Era [Streptococcus pneumoniae 2090008]
gi|421229614|ref|ZP_15686286.1| GTP-binding protein Era [Streptococcus pneumoniae 2061376]
gi|421291842|ref|ZP_15742580.1| GTP-binding protein Era [Streptococcus pneumoniae GA56348]
gi|395576335|gb|EJG36891.1| GTP-binding protein Era [Streptococcus pneumoniae 2090008]
gi|395596275|gb|EJG56495.1| GTP-binding protein Era [Streptococcus pneumoniae 2061376]
gi|395894059|gb|EJH05040.1| GTP-binding protein Era [Streptococcus pneumoniae GA56348]
Length = 299
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKIPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMLREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|119511690|ref|ZP_01630795.1| GTP-binding protein Era [Nodularia spumigena CCY9414]
gi|119463675|gb|EAW44607.1| GTP-binding protein Era [Nodularia spumigena CCY9414]
Length = 324
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 177/293 (60%), Gaps = 15/293 (5%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DTPG I K H
Sbjct: 37 IIGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGILTTPEAQLIFVDTPG-IHKPHH 95
Query: 176 MLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDKLPILLVLNK 231
L +++KN R+A + D ++ +VD AC A +R I ++L + + P++L LNK
Sbjct: 96 QLGQVLVKNARNAIDSVDVVLFVVDGSVACGAGDRFIADLLV------RTETPVILGLNK 149
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
D +P + Y+ + + ++ SA+ G G+ +++ ++ L GP YYP D+
Sbjct: 150 IDQ-QPPNFQPIDDSYQALAETQQWPIVKFSAQTGAGLPELQQLLIEHLETGPFYYPPDL 208
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++ PERF +GE+IRE+I + R EVP++ + + PT + I VE++SQK
Sbjct: 209 VTDQPERFIMGELIREQILLLTREEVPHSVAIAIDRVDESPTITRIL-ATIHVERDSQKG 267
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIGKGG LK + + AR I+ + KVYLE+ VKV+E WRQ L GY
Sbjct: 268 ILIGKGGSMLKAIGSEAREQIQKLIAGKVYLELFVKVQEKWRQSRMTLAELGY 320
>gi|374290149|ref|YP_005037202.1| GTP-binding protein Era [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358376941|gb|AEU09129.1| GTP-binding protein Era [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 301
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 185/303 (61%), Gaps = 16/303 (5%)
Query: 112 NHK------SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
NHK +++G PNVGKSTL N ++G+ +SI+TNKPQTTRHRILGI +YQ+I D
Sbjct: 3 NHKHKSGFVNIIGFPNVGKSTLMNSLVGENISIITNKPQTTRHRILGIIDQYDYQIIFSD 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPGI+ K I+ + +MM+ V+ + +AD I+ + K +++ L + K+PI
Sbjct: 63 TPGIMIKPIYSMQKIMMQYVKKSFKDADIILFTTEIGKF-NLLNKYLSFLKFLKEQKIPI 121
Query: 226 LLVLNKKDLI----KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
L+++NK D I + + ++ F E++P+SA + + + IL L G
Sbjct: 122 LILINKIDKIGVVYSENMLYDTINYWNNFFPNSEILPISALKNINQDLLLNKILDLLSKG 181
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE-- 339
P YYPK I+S+ ERFFV EIIREKIF+ Y+ E+PY+ +++ +K K+ I ++
Sbjct: 182 PPYYPKGILSDRSERFFVNEIIREKIFLMYKKEIPYSVEISTEKFK---NGKNSIHIDSS 238
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE++SQK ILIGK G ++ L + IE+F KK++L + VK+ +NWR + L++
Sbjct: 239 IYVERDSQKGILIGKKGNSINKLGYFSIKGIENFFSKKIWLRLNVKICKNWRSNYKKLQN 298
Query: 400 YGY 402
+GY
Sbjct: 299 FGY 301
>gi|260591203|ref|ZP_05856661.1| GTP-binding protein Era [Prevotella veroralis F0319]
gi|260537068|gb|EEX19685.1| GTP-binding protein Era [Prevotella veroralis F0319]
Length = 293
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADILLYVTDVVENPEKNMDFLEKV---SKMTIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + + K E++P+SAK G + + I LP PA++ KD +++ P
Sbjct: 124 SDQKKLGDLVGRWHKLLPNAEILPISAKNKFGTDILMKRIHELLPDSPAFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI Y EVPY+ +V V +K + I I VE++SQK I+IG
Sbjct: 184 ARFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDDRQIHINAVIYVERSSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KKV+LE VKV ++WR + L ++GY
Sbjct: 243 QGMALKKVSTEARKSLERFFDKKVFLETFVKVDKDWRNSQKELNNFGYN 291
>gi|225854473|ref|YP_002735985.1| GTP-binding protein Era [Streptococcus pneumoniae JJA]
gi|418086704|ref|ZP_12723874.1| GTP-binding protein Era [Streptococcus pneumoniae GA47033]
gi|418202243|ref|ZP_12838673.1| GTP-binding protein Era [Streptococcus pneumoniae GA52306]
gi|419455368|ref|ZP_13995328.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP04]
gi|421236115|ref|ZP_15692716.1| GTP-binding protein Era [Streptococcus pneumoniae 2071004]
gi|421284927|ref|ZP_15735704.1| GTP-binding protein Era [Streptococcus pneumoniae GA60190]
gi|254783668|sp|C1CDW4.1|ERA_STRZJ RecName: Full=GTPase Era
gi|225722974|gb|ACO18827.1| GTP-binding protein Era [Streptococcus pneumoniae JJA]
gi|353758965|gb|EHD39551.1| GTP-binding protein Era [Streptococcus pneumoniae GA47033]
gi|353868046|gb|EHE47936.1| GTP-binding protein Era [Streptococcus pneumoniae GA52306]
gi|379629825|gb|EHZ94419.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP04]
gi|395605034|gb|EJG65166.1| GTP-binding protein Era [Streptococcus pneumoniae 2071004]
gi|395886906|gb|EJG97921.1| GTP-binding protein Era [Streptococcus pneumoniae GA60190]
Length = 299
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLGEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|255014875|ref|ZP_05287001.1| GTP-binding protein Era [Bacteroides sp. 2_1_7]
gi|256840957|ref|ZP_05546464.1| GTP-binding protein Era [Parabacteroides sp. D13]
gi|410102716|ref|ZP_11297641.1| GTP-binding protein Era [Parabacteroides sp. D25]
gi|423330208|ref|ZP_17307992.1| GTP-binding protein Era [Parabacteroides distasonis CL03T12C09]
gi|423339343|ref|ZP_17317084.1| GTP-binding protein Era [Parabacteroides distasonis CL09T03C24]
gi|256736800|gb|EEU50127.1| GTP-binding protein Era [Parabacteroides sp. D13]
gi|409230724|gb|EKN23585.1| GTP-binding protein Era [Parabacteroides distasonis CL09T03C24]
gi|409231824|gb|EKN24672.1| GTP-binding protein Era [Parabacteroides distasonis CL03T12C09]
gi|409237843|gb|EKN30638.1| GTP-binding protein Era [Parabacteroides sp. D25]
Length = 297
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 184/294 (62%), Gaps = 9/294 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 6 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPG 65
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
++ + +SM+ + + G +AD ++ + D + ++ +E L + P+LL+
Sbjct: 66 VLRPNYKLQESMLNFSQSALG-DADVLLYVTDVVETIDKNNEFLARV---QSIECPVLLL 121
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 122 INKIDQTNQPELEKLVAQWKELLPKAEIIPISALSNFNIDYVKRRVEELMPDSPPYFEKD 181
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE+++QK
Sbjct: 182 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEDDELIH-IKALIIVERDTQK 240
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG G+ALK + AR DIE F KKV+LE+ VKV+++WR + +LK++GY
Sbjct: 241 GIIIGHQGQALKKVGAMARKDIERFFGKKVFLEMFVKVEKDWRNRDNILKNFGY 294
>gi|422823153|ref|ZP_16871341.1| GTP-binding protein Era [Streptococcus sanguinis SK405]
gi|422826760|ref|ZP_16874939.1| GTP-binding protein Era [Streptococcus sanguinis SK678]
gi|422855100|ref|ZP_16901758.1| GTP-binding protein Era [Streptococcus sanguinis SK1]
gi|422862083|ref|ZP_16908715.1| GTP-binding protein Era [Streptococcus sanguinis SK408]
gi|422865052|ref|ZP_16911677.1| GTP-binding protein Era [Streptococcus sanguinis SK1058]
gi|324993803|gb|EGC25722.1| GTP-binding protein Era [Streptococcus sanguinis SK405]
gi|324994878|gb|EGC26791.1| GTP-binding protein Era [Streptococcus sanguinis SK678]
gi|327463077|gb|EGF09398.1| GTP-binding protein Era [Streptococcus sanguinis SK1]
gi|327474678|gb|EGF20083.1| GTP-binding protein Era [Streptococcus sanguinis SK408]
gi|327490236|gb|EGF22024.1| GTP-binding protein Era [Streptococcus sanguinis SK1058]
Length = 299
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSYLIDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|149019560|ref|ZP_01834879.1| GTP-binding protein Era [Streptococcus pneumoniae SP23-BS72]
gi|418102689|ref|ZP_12739765.1| GTP-binding protein Era [Streptococcus pneumoniae NP070]
gi|419475362|ref|ZP_14015202.1| GTP-binding protein Era [Streptococcus pneumoniae GA14688]
gi|419486518|ref|ZP_14026284.1| GTP-binding protein Era [Streptococcus pneumoniae GA44128]
gi|421208790|ref|ZP_15665812.1| GTP-binding protein Era [Streptococcus pneumoniae 2070005]
gi|421224836|ref|ZP_15681580.1| GTP-binding protein Era [Streptococcus pneumoniae 2070768]
gi|147930935|gb|EDK81915.1| GTP-binding protein Era [Streptococcus pneumoniae SP23-BS72]
gi|353776855|gb|EHD57330.1| GTP-binding protein Era [Streptococcus pneumoniae NP070]
gi|379560907|gb|EHZ25928.1| GTP-binding protein Era [Streptococcus pneumoniae GA14688]
gi|379588133|gb|EHZ52979.1| GTP-binding protein Era [Streptococcus pneumoniae GA44128]
gi|395575746|gb|EJG36311.1| GTP-binding protein Era [Streptococcus pneumoniae 2070005]
gi|395590624|gb|EJG50928.1| GTP-binding protein Era [Streptococcus pneumoniae 2070768]
Length = 299
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMLREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|347520837|ref|YP_004778408.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385832200|ref|YP_005869975.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|420143626|ref|ZP_14651123.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
gi|343179405|dbj|BAK57744.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343181353|dbj|BAK59691.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|391856497|gb|EIT67037.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
Length = 303
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 175/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + + Q+I DTPGI K
Sbjct: 12 AILGRPNVGKSTFLNHVMGQKIAIMSDKPQTTRNKIQGIYTTDKEQIIFIDTPGI-HKPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S D ++ +V A + + ++ E + +P++LV+NK D
Sbjct: 71 NALGDFMVQSAYSTLRECDMVLFMVAADEPRSTGENMIIERL--KTADVPVILVVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + + + Y D EV+P+SA G+ E + + + KL GP Y+P+D+V++HP
Sbjct: 129 VHPDALFETVSDYTSQMDFAEVVPISALQGNNTERLLETLSNKLEEGPQYFPEDMVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI + R EVP++ V S K T K I I+VE+ SQK I++G
Sbjct: 189 ERFLVSEMIREKILLLTREEVPHSIAVTTDSMKRDEETGKIHIMATIIVERKSQKGIILG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG ++ + AR DIE L KVYLE VK+K +WR + L +GY
Sbjct: 249 KGGDMIRKIGKMARRDIELMLGDKVYLETWVKIKNDWRDRKMDLSDFGY 297
>gi|302345899|ref|YP_003814252.1| GTP-binding protein Era [Prevotella melaninogenica ATCC 25845]
gi|302149370|gb|ADK95632.1| GTP-binding protein Era [Prevotella melaninogenica ATCC 25845]
Length = 293
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDTQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADILLYVTDVVEDPEKNMDFLEKV---SKMSIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + + E++P+SAK GV+ + + LP PA++ KD +++ P
Sbjct: 124 SDQKTLGNLVTKWHGLLPNAEILPISAKNKFGVDILLKRVHELLPESPAFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y E+PY+ +V + +K + I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIIREKILRYYDKEIPYSVEVVIERFK-EDDRQIHISAIIYVERSSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KK++LE VKV ++WR + LKH+GY
Sbjct: 243 QGMALKKVSTEARKSLERFFDKKIFLETFVKVDKDWRNSQKELKHFGYS 291
>gi|421488515|ref|ZP_15935903.1| GTP-binding protein Era [Streptococcus oralis SK304]
gi|400367732|gb|EJP20747.1| GTP-binding protein Era [Streptococcus oralis SK304]
Length = 299
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 IHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|342164083|ref|YP_004768722.1| GTPase Era [Streptococcus pseudopneumoniae IS7493]
gi|341933965|gb|AEL10862.1| GTPase Era [Streptococcus pseudopneumoniae IS7493]
Length = 299
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|262282704|ref|ZP_06060472.1| GTP-binding protein [Streptococcus sp. 2_1_36FAA]
gi|262261995|gb|EEY80693.1| GTP-binding protein [Streptococcus sp. 2_1_36FAA]
Length = 299
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVIDSMKRDDETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|348027347|ref|YP_004767152.1| GTP-binding protein Era [Megasphaera elsdenii DSM 20460]
gi|341823401|emb|CCC74325.1| GTP-binding protein Era [Megasphaera elsdenii DSM 20460]
Length = 297
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 171/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +I K+SIV++K QTTR+RIL I + E Q++ DTPGI + K
Sbjct: 10 AVVGRPNVGKSTLINHIIKHKVSIVSDKAQTTRNRILCIHTDDECQIVFLDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M + + + D ++ L+ + D + E + D +P+ L++NK D+
Sbjct: 69 HKLGEFMDEAAYQSLRDIDAVLFLISGNEKKGPGDLFVLEKLKDVG--VPVFLIINKIDV 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ EI KK+ Y + +VIP+SA G V+ + D + LP GP Y+P D++++ P
Sbjct: 127 MSKEEILKKITEYAELYPFAQVIPISALKGDNVDAVVDELRKILPEGPKYFPDDMITDQP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER V EI+REK+F R+EVP+A V R K +I+V + VE++SQK I+IGK
Sbjct: 187 ERLLVAEIVREKLFRCTRDEVPHAIAAYVEEMTQRGKNKVYIRVTVYVERDSQKRIVIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR +IE+ L VYL+I VKVK +WR G L GY
Sbjct: 247 NGAVLKEVGNLARQEIENLLGSSVYLDIWVKVKRDWRNKSGALSELGY 294
>gi|290968422|ref|ZP_06559961.1| GTP-binding protein Era [Megasphaera genomosp. type_1 str. 28L]
gi|290781418|gb|EFD94007.1| GTP-binding protein Era [Megasphaera genomosp. type_1 str. 28L]
Length = 299
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 170/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N ++ QK+SIV++K QTTR+RIL I + Q++ DTPGI + K
Sbjct: 12 AVVGRPNVGKSTLINYIVRQKVSIVSDKAQTTRNRILCIYTDAAGQIVFLDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M + + D ++ LV + D + E + + K+P+ L++NK DL
Sbjct: 71 HKLGEYMDAAAYQSLRDIDAVLFLVAGNEKKGPGDLFVAEKL--NACKVPVFLLINKVDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ EI +K+ Y +IPVSA+ G V + + LP GP Y+P+D+V++ P
Sbjct: 129 LTKAEILQKITEYRSVYPFAGIIPVSARTGDNVATVMGELKKILPPGPQYFPEDMVTDQP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER EIIREK+ + R E+P+A V V K R K +I+ + VE+NSQK I+IGK
Sbjct: 189 ERVLAAEIIREKLLLSLREEIPHAIAVYVDEMKKREKNKVYIRATVYVERNSQKRIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AAR +IE+ L V+L+I VK+K +WR L+ +GY
Sbjct: 249 NGSVLKEVGQAARQEIENLLGSSVFLDIWVKIKADWRNKASALREFGY 296
>gi|390631171|ref|ZP_10259136.1| GTPase Era [Weissella confusa LBAE C39-2]
gi|390483599|emb|CCF31484.1| GTPase Era [Weissella confusa LBAE C39-2]
Length = 302
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + E Q++ DTPGI K
Sbjct: 12 ALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTDEGQIVFMDTPGI-HKPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K SA AD + LV+A + D+ + + D P+ L++NK DL
Sbjct: 71 NSLGDFMVKTAMSALREADMVWFLVNADEPRGAGDDFIINRLKDTN--TPVYLIINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + Y + + E+ P+SA G GV ++ D+ + K+ GP YYP D +++HP
Sbjct: 129 VNPSDLLAIIADYSQQMEFAEIFPISALKGDGVPELLDFAMDKMEEGPQYYPADQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E+IREK+ R EVP++ V + + + +Q IVVE+ +QK I+IGK
Sbjct: 189 ERFIMSELIREKVLQLTRQEVPHSVAVVIDKIERQDENHLHVQATIVVERPTQKNIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G +K + AR DIE L K++LE VKV+E WR L+ YGY
Sbjct: 249 QGAMIKEIGVRARKDIERLLGDKIFLETWVKVEERWRDKPQALQTYGY 296
>gi|288801361|ref|ZP_06406815.1| GTP-binding protein Era [Prevotella sp. oral taxon 299 str. F0039]
gi|288331744|gb|EFC70228.1| GTP-binding protein Era [Prevotella sp. oral taxon 299 str. F0039]
Length = 293
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 178/289 (61%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + PE+ E LE+ H D +PI+L++NK D+
Sbjct: 68 RLQESMLAFS-ESALTDADILLYVTDVIENPEKNIEFLEKV--QHLD-IPIILLINKIDM 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + E++P+SA GV+ + + I LP P ++ KD +++ P
Sbjct: 124 SDQKTLGSLVEKWHSLLPKAEILPLSALNKFGVDILLNRIKDLLPDSPPFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K I+V I VE+NSQK I+IG
Sbjct: 184 ARFFVSEIIREKILLFYDKEIPYSVEVRVEEFKEDSKLIR-IRVIIYVERNSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK +++ AR +E F KK+YLEI VKV ++WR + L +GY
Sbjct: 243 QGVALKKVSSEARKSLERFFGKKIYLEIFVKVDKDWRSSQKELDSFGYN 291
>gi|288803891|ref|ZP_06409316.1| GTP-binding protein Era [Prevotella melaninogenica D18]
gi|288333656|gb|EFC72106.1| GTP-binding protein Era [Prevotella melaninogenica D18]
Length = 293
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDTQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADILLYVTDVVEDPEKNMDFLEKV---SKMSIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + + E++P+SAK GV+ + + LP PA++ KD +++ P
Sbjct: 124 SDQKTLGNLVTKWHGLLPNAEILPISAKNKFGVDILLRRVHELLPESPAFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y E+PY+ +V + +K + I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIIREKILRYYDKEIPYSVEVVIERFK-EDDRQIHISAIIYVERSSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KK++LE VKV ++WR + LKH+GY
Sbjct: 243 QGMALKKVSTEARKSLERFFDKKIFLETFVKVDKDWRNSQKELKHFGYS 291
>gi|383810860|ref|ZP_09966344.1| GTP-binding protein Era [Prevotella sp. oral taxon 306 str. F0472]
gi|383356499|gb|EID33999.1| GTP-binding protein Era [Prevotella sp. oral taxon 306 str. F0472]
Length = 293
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADILLYVTDVVEDPEKNMDFLEKV---SKMAIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + + K E++P+SAK G + + I LP PA++ KD +++ P
Sbjct: 124 SDQKKLGDLVGRWHKLLPNAEILPISAKNKFGTDILMKRIHELLPDSPAFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI Y EVPY+ +V V +K + I I VE++SQK I+IG
Sbjct: 184 ARFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDDRQIHINAIIYVERSSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KKV+LE VKV ++WR + L ++GY
Sbjct: 243 QGMALKKVSTEARKSLERFFDKKVFLETFVKVDKDWRNSQKELNNFGYN 291
>gi|284047992|ref|YP_003398331.1| GTP-binding protein Era [Acidaminococcus fermentans DSM 20731]
gi|283952213|gb|ADB47016.1| GTP-binding protein Era [Acidaminococcus fermentans DSM 20731]
Length = 308
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 177/297 (59%), Gaps = 3/297 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +V+G+PN GKSTL N ++G+K++I++++PQTTR+RIL I S E QM+ DTPG+
Sbjct: 10 HSGFVAVVGRPNAGKSTLVNHLVGEKVAIISDRPQTTRNRILSILSTEEAQMVFLDTPGL 69
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M++ +A D ++ +VDA + + ++++ E + + P++LVL
Sbjct: 70 -HKPQDKLGEHMVQAALNAIKEVDVVLFVVDASEKRGKGEQVILERLKEECHA-PVILVL 127
Query: 230 NKKD-LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D L + ++ + K V+ +SA + I+ LP GP++YP+D
Sbjct: 128 NKIDRLPDKAVLLPIIDKFRKEYPFRSVLTLSALEDEDFSPLLQEIVRCLPEGPSFYPED 187
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+ ++ PER EI+REKI R+EVP+A V V KTRP +++ +I VE++SQK
Sbjct: 188 MYTDQPERVMAAEIVREKILQLTRDEVPHAVAVQVQEMKTRPNNLVYVRADIYVERDSQK 247
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
ILIG GK LK ++ AR D+E FL +VYLE+ VKV+ WR+ EG LK G G+
Sbjct: 248 AILIGAKGKMLKEISQRAREDMEAFLGNRVYLELWVKVRPKWREKEGDLKRLGLAGE 304
>gi|359406191|ref|ZP_09198900.1| ribosome biogenesis GTPase Era [Prevotella stercorea DSM 18206]
gi|357556609|gb|EHJ38198.1| ribosome biogenesis GTPase Era [Prevotella stercorea DSM 18206]
Length = 293
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 176/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNEEDAQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + PE+ + L++ + +P+LL++NK D
Sbjct: 68 KLQESMLAFS-ESALQDADVLLYVTDVVENPEKNQDFLDKV---KRMTIPVLLLINKIDQ 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + + E++P+SAK GV+ + I LP P ++ KD +++ P
Sbjct: 124 SDQKTLGDTVERWHQLLPNAEILPISAKNKFGVDMLMRRIKELLPDSPPFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V S+K D I I VE++SQK I+IG
Sbjct: 184 ARFFVSEIIREKILLYYDKEIPYSVEVKVESFKETDKHID-IHAVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F K VYL VKV ++WR + L ++GY
Sbjct: 243 QGVALKKMSTEARKSLEKFFGKSVYLHTFVKVDKDWRSSQRELDNFGYN 291
>gi|331266548|ref|YP_004326178.1| GTPase/GTP-binding protein Era [Streptococcus oralis Uo5]
gi|419782800|ref|ZP_14308598.1| GTP-binding protein Era [Streptococcus oralis SK610]
gi|326683220|emb|CBZ00838.1| GTPase/GTP-binding protein Era [Streptococcus oralis Uo5]
gi|383183013|gb|EIC75561.1| GTP-binding protein Era [Streptococcus oralis SK610]
Length = 299
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|29376905|ref|NP_816059.1| GTP-binding protein Era [Enterococcus faecalis V583]
gi|227519872|ref|ZP_03949921.1| GTP-binding protein Era [Enterococcus faecalis TX0104]
gi|227553941|ref|ZP_03983988.1| GTP-binding protein Era [Enterococcus faecalis HH22]
gi|229549418|ref|ZP_04438143.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29200]
gi|255975189|ref|ZP_05425775.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T2]
gi|256617033|ref|ZP_05473879.1| GTP-binding protein Era [Enterococcus faecalis ATCC 4200]
gi|256763103|ref|ZP_05503683.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T3]
gi|256853771|ref|ZP_05559136.1| GTP-binding protein Era [Enterococcus faecalis T8]
gi|256956687|ref|ZP_05560858.1| GTP-binding protein Era [Enterococcus faecalis DS5]
gi|256961296|ref|ZP_05565467.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Merz96]
gi|256963577|ref|ZP_05567748.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis HIP11704]
gi|257079642|ref|ZP_05574003.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis JH1]
gi|257082012|ref|ZP_05576373.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis E1Sol]
gi|257084563|ref|ZP_05578924.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Fly1]
gi|257087441|ref|ZP_05581802.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis D6]
gi|257090600|ref|ZP_05584961.1| small GTP-binding protein [Enterococcus faecalis CH188]
gi|257416648|ref|ZP_05593642.1| GTP-binding protein Era [Enterococcus faecalis ARO1/DG]
gi|257419864|ref|ZP_05596858.1| small GTP-binding protein Era [Enterococcus faecalis T11]
gi|257421948|ref|ZP_05598938.1| GTP-binding protein Era [Enterococcus faecalis X98]
gi|293383580|ref|ZP_06629490.1| GTP-binding protein Era [Enterococcus faecalis R712]
gi|293387307|ref|ZP_06631863.1| GTP-binding protein Era [Enterococcus faecalis S613]
gi|294780922|ref|ZP_06746276.1| GTP-binding protein Era [Enterococcus faecalis PC1.1]
gi|307270833|ref|ZP_07552121.1| GTP-binding protein Era [Enterococcus faecalis TX4248]
gi|307271516|ref|ZP_07552788.1| GTP-binding protein Era [Enterococcus faecalis TX0855]
gi|307277156|ref|ZP_07558260.1| GTP-binding protein Era [Enterococcus faecalis TX2134]
gi|307285808|ref|ZP_07565942.1| GTP-binding protein Era [Enterococcus faecalis TX0860]
gi|307287711|ref|ZP_07567754.1| GTP-binding protein Era [Enterococcus faecalis TX0109]
gi|307290538|ref|ZP_07570450.1| GTP-binding protein Era [Enterococcus faecalis TX0411]
gi|312899839|ref|ZP_07759158.1| GTP-binding protein Era [Enterococcus faecalis TX0470]
gi|312905132|ref|ZP_07764253.1| GTP-binding protein Era [Enterococcus faecalis TX0635]
gi|312906130|ref|ZP_07765142.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 512]
gi|312909476|ref|ZP_07768331.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 516]
gi|312953489|ref|ZP_07772329.1| GTP-binding protein Era [Enterococcus faecalis TX0102]
gi|384513806|ref|YP_005708899.1| GTP-binding protein Era [Enterococcus faecalis OG1RF]
gi|384519266|ref|YP_005706571.1| GTP-binding protein Era [Enterococcus faecalis 62]
gi|397700599|ref|YP_006538387.1| GTP-binding protein Era [Enterococcus faecalis D32]
gi|421513047|ref|ZP_15959835.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29212]
gi|422685105|ref|ZP_16743330.1| GTP-binding protein Era [Enterococcus faecalis TX4000]
gi|422687890|ref|ZP_16746061.1| GTP-binding protein Era [Enterococcus faecalis TX0630]
gi|422693246|ref|ZP_16751260.1| GTP-binding protein Era [Enterococcus faecalis TX0031]
gi|422695915|ref|ZP_16753893.1| GTP-binding protein Era [Enterococcus faecalis TX4244]
gi|422697838|ref|ZP_16755769.1| GTP-binding protein Era [Enterococcus faecalis TX1346]
gi|422701351|ref|ZP_16759192.1| GTP-binding protein Era [Enterococcus faecalis TX1342]
gi|422703689|ref|ZP_16761509.1| GTP-binding protein Era [Enterococcus faecalis TX1302]
gi|422706985|ref|ZP_16764682.1| GTP-binding protein Era [Enterococcus faecalis TX0043]
gi|422709889|ref|ZP_16767235.1| GTP-binding protein Era [Enterococcus faecalis TX0027]
gi|422714953|ref|ZP_16771677.1| GTP-binding protein Era [Enterococcus faecalis TX0309A]
gi|422717369|ref|ZP_16774054.1| GTP-binding protein Era [Enterococcus faecalis TX0309B]
gi|422719864|ref|ZP_16776487.1| GTP-binding protein Era [Enterococcus faecalis TX0017]
gi|422724756|ref|ZP_16781232.1| GTP-binding protein Era [Enterococcus faecalis TX2137]
gi|422725961|ref|ZP_16782418.1| GTP-binding protein Era [Enterococcus faecalis TX0312]
gi|422729550|ref|ZP_16785951.1| GTP-binding protein Era [Enterococcus faecalis TX0012]
gi|422732311|ref|ZP_16788651.1| GTP-binding protein Era [Enterococcus faecalis TX0645]
gi|422736788|ref|ZP_16793050.1| GTP-binding protein Era [Enterococcus faecalis TX1341]
gi|422739371|ref|ZP_16794552.1| GTP-binding protein Era [Enterococcus faecalis TX2141]
gi|424675672|ref|ZP_18112569.1| ribosome biogenesis GTPase Era [Enterococcus faecalis 599]
gi|424676229|ref|ZP_18113106.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV103]
gi|424680596|ref|ZP_18117399.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV116]
gi|424683114|ref|ZP_18119868.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV129]
gi|424686680|ref|ZP_18123346.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV25]
gi|424689554|ref|ZP_18126125.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV31]
gi|424694086|ref|ZP_18130495.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV37]
gi|424697665|ref|ZP_18133987.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV41]
gi|424700161|ref|ZP_18136359.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV62]
gi|424702997|ref|ZP_18139134.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV63]
gi|424710176|ref|ZP_18143642.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV65]
gi|424717864|ref|ZP_18147138.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV68]
gi|424721089|ref|ZP_18150187.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV72]
gi|424725055|ref|ZP_18153982.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV73]
gi|424727291|ref|ZP_18155924.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV81]
gi|424742080|ref|ZP_18170414.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV85]
gi|424751211|ref|ZP_18179243.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV93]
gi|424760585|ref|ZP_18188197.1| ribosome biogenesis GTPase Era [Enterococcus faecalis R508]
gi|428767617|ref|YP_007153728.1| GTP-binding protein era homolog [Enterococcus faecalis str.
Symbioflor 1]
gi|430359665|ref|ZP_19425917.1| GTP-binding protein Era [Enterococcus faecalis OG1X]
gi|430370086|ref|ZP_19428885.1| GTP-binding protein Era [Enterococcus faecalis M7]
gi|81436511|sp|Q831T9.1|ERA_ENTFA RecName: Full=GTPase Era
gi|29344370|gb|AAO82129.1| GTP-binding protein Era [Enterococcus faecalis V583]
gi|227072666|gb|EEI10629.1| GTP-binding protein Era [Enterococcus faecalis TX0104]
gi|227176927|gb|EEI57899.1| GTP-binding protein Era [Enterococcus faecalis HH22]
gi|229305655|gb|EEN71651.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29200]
gi|255968061|gb|EET98683.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T2]
gi|256596560|gb|EEU15736.1| GTP-binding protein Era [Enterococcus faecalis ATCC 4200]
gi|256684354|gb|EEU24049.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T3]
gi|256710714|gb|EEU25757.1| GTP-binding protein Era [Enterococcus faecalis T8]
gi|256947183|gb|EEU63815.1| GTP-binding protein Era [Enterococcus faecalis DS5]
gi|256951792|gb|EEU68424.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Merz96]
gi|256954073|gb|EEU70705.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis HIP11704]
gi|256987672|gb|EEU74974.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis JH1]
gi|256990042|gb|EEU77344.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis E1Sol]
gi|256992593|gb|EEU79895.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Fly1]
gi|256995471|gb|EEU82773.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis D6]
gi|256999412|gb|EEU85932.1| small GTP-binding protein [Enterococcus faecalis CH188]
gi|257158476|gb|EEU88436.1| GTP-binding protein Era [Enterococcus faecalis ARO1/DG]
gi|257161692|gb|EEU91652.1| small GTP-binding protein Era [Enterococcus faecalis T11]
gi|257163772|gb|EEU93732.1| GTP-binding protein Era [Enterococcus faecalis X98]
gi|291079092|gb|EFE16456.1| GTP-binding protein Era [Enterococcus faecalis R712]
gi|291083205|gb|EFE20168.1| GTP-binding protein Era [Enterococcus faecalis S613]
gi|294452048|gb|EFG20496.1| GTP-binding protein Era [Enterococcus faecalis PC1.1]
gi|295113464|emb|CBL32101.1| GTP-binding protein Era [Enterococcus sp. 7L76]
gi|306498393|gb|EFM67898.1| GTP-binding protein Era [Enterococcus faecalis TX0411]
gi|306501449|gb|EFM70752.1| GTP-binding protein Era [Enterococcus faecalis TX0109]
gi|306502569|gb|EFM71836.1| GTP-binding protein Era [Enterococcus faecalis TX0860]
gi|306506086|gb|EFM75252.1| GTP-binding protein Era [Enterococcus faecalis TX2134]
gi|306511788|gb|EFM80786.1| GTP-binding protein Era [Enterococcus faecalis TX0855]
gi|306512834|gb|EFM81478.1| GTP-binding protein Era [Enterococcus faecalis TX4248]
gi|310627776|gb|EFQ11059.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 512]
gi|310628698|gb|EFQ11981.1| GTP-binding protein Era [Enterococcus faecalis TX0102]
gi|310631522|gb|EFQ14805.1| GTP-binding protein Era [Enterococcus faecalis TX0635]
gi|311290149|gb|EFQ68705.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 516]
gi|311293089|gb|EFQ71645.1| GTP-binding protein Era [Enterococcus faecalis TX0470]
gi|315025403|gb|EFT37335.1| GTP-binding protein Era [Enterococcus faecalis TX2137]
gi|315030211|gb|EFT42143.1| GTP-binding protein Era [Enterococcus faecalis TX4000]
gi|315032903|gb|EFT44835.1| GTP-binding protein Era [Enterococcus faecalis TX0017]
gi|315035613|gb|EFT47545.1| GTP-binding protein Era [Enterococcus faecalis TX0027]
gi|315144805|gb|EFT88821.1| GTP-binding protein Era [Enterococcus faecalis TX2141]
gi|315146685|gb|EFT90701.1| GTP-binding protein Era [Enterococcus faecalis TX4244]
gi|315150151|gb|EFT94167.1| GTP-binding protein Era [Enterococcus faecalis TX0012]
gi|315152156|gb|EFT96172.1| GTP-binding protein Era [Enterococcus faecalis TX0031]
gi|315155343|gb|EFT99359.1| GTP-binding protein Era [Enterococcus faecalis TX0043]
gi|315159081|gb|EFU03098.1| GTP-binding protein Era [Enterococcus faecalis TX0312]
gi|315161673|gb|EFU05690.1| GTP-binding protein Era [Enterococcus faecalis TX0645]
gi|315164810|gb|EFU08827.1| GTP-binding protein Era [Enterococcus faecalis TX1302]
gi|315166396|gb|EFU10413.1| GTP-binding protein Era [Enterococcus faecalis TX1341]
gi|315170292|gb|EFU14309.1| GTP-binding protein Era [Enterococcus faecalis TX1342]
gi|315173673|gb|EFU17690.1| GTP-binding protein Era [Enterococcus faecalis TX1346]
gi|315574358|gb|EFU86549.1| GTP-binding protein Era [Enterococcus faecalis TX0309B]
gi|315579040|gb|EFU91231.1| GTP-binding protein Era [Enterococcus faecalis TX0630]
gi|315580167|gb|EFU92358.1| GTP-binding protein Era [Enterococcus faecalis TX0309A]
gi|323481399|gb|ADX80838.1| GTP-binding protein Era [Enterococcus faecalis 62]
gi|327535695|gb|AEA94529.1| GTP-binding protein Era [Enterococcus faecalis OG1RF]
gi|397337238|gb|AFO44910.1| GTP-binding protein Era [Enterococcus faecalis D32]
gi|401673876|gb|EJS80246.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29212]
gi|402350308|gb|EJU85212.1| ribosome biogenesis GTPase Era [Enterococcus faecalis 599]
gi|402353894|gb|EJU88716.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV116]
gi|402357488|gb|EJU92195.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV103]
gi|402365880|gb|EJV00294.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV129]
gi|402367075|gb|EJV01426.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV25]
gi|402367639|gb|EJV01978.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV31]
gi|402371868|gb|EJV06012.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV37]
gi|402374537|gb|EJV08553.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV62]
gi|402375196|gb|EJV09188.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV41]
gi|402383604|gb|EJV17199.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV68]
gi|402383888|gb|EJV17467.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV65]
gi|402385652|gb|EJV19184.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV63]
gi|402392285|gb|EJV25549.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV72]
gi|402392330|gb|EJV25593.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV73]
gi|402397194|gb|EJV30225.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV81]
gi|402400982|gb|EJV33785.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV85]
gi|402403278|gb|EJV35957.1| ribosome biogenesis GTPase Era [Enterococcus faecalis R508]
gi|402405765|gb|EJV38349.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV93]
gi|427185790|emb|CCO73014.1| GTP-binding protein era homolog [Enterococcus faecalis str.
Symbioflor 1]
gi|429513289|gb|ELA02876.1| GTP-binding protein Era [Enterococcus faecalis OG1X]
gi|429515635|gb|ELA05146.1| GTP-binding protein Era [Enterococcus faecalis M7]
Length = 300
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 191/295 (64%), Gaps = 9/295 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
I + K H L M+++ +A D + +V A + + D+ + E + ++ P+ L+
Sbjct: 65 IHKPK-HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLI 121
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D + P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D
Sbjct: 122 INKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDD 181
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV-SYKTRPTAKDFIQVEIVVEKNSQ 347
+++HPE F V E+IREK+ + R+E+P++ V VV S K K +Q I+VE++SQ
Sbjct: 182 QITDHPEYFIVSELIREKVLLLTRDEIPHSVAV-VVDSMKRDENDKVHVQATIIVERDSQ 240
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGGK LK + T AR DIE L KVYLE+ VKV+++WR + L+ +GY
Sbjct: 241 KGIIIGKGGKMLKQIGTKARQDIEYLLDDKVYLELWVKVQKDWRDKKIYLQDFGY 295
>gi|406586430|ref|ZP_11061361.1| GTPase Era [Streptococcus sp. GMD1S]
gi|419813651|ref|ZP_14338464.1| GTPase Era [Streptococcus sp. GMD2S]
gi|419817014|ref|ZP_14341185.1| GTPase Era [Streptococcus sp. GMD4S]
gi|404466555|gb|EKA11887.1| GTPase Era [Streptococcus sp. GMD4S]
gi|404472762|gb|EKA17177.1| GTPase Era [Streptococcus sp. GMD2S]
gi|404474110|gb|EKA18430.1| GTPase Era [Streptococcus sp. GMD1S]
Length = 299
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLTQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|392427201|ref|YP_006468195.1| GTP-binding protein Era [Desulfosporosinus acidiphilus SJ4]
gi|391357164|gb|AFM42863.1| GTP-binding protein Era [Desulfosporosinus acidiphilus SJ4]
Length = 304
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 175/293 (59%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PN GKSTL N ++GQK+ I+++KPQTTR+RI I + Q++ DTPGI + K
Sbjct: 15 SVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEKRGQIVFLDTPGIHKPK- 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDHKDKLPILLVLN 230
H L M+ + + D I+ +VD E I E+L+ K P++LVLN
Sbjct: 74 HKLGEYMVGAAKESMREVDAIIYMVDLSSDYGSGEEYIIEMLKH------TKTPVVLVLN 127
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K DL+ ++ K++ + + ++P+SAK G +++ + I +P GP YYP+D V
Sbjct: 128 KVDLLGKEQLVHKIQQFSALAEFKAIVPISAKTGENTDELLNVIFNLMPKGPMYYPEDEV 187
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++ PERF + E+IREK+ R+E+P++ V + + + + I+ I+VE+ SQK I
Sbjct: 188 TDQPERFIMAELIREKVLQLTRDEIPHSIAVVIEEVQEKKSLVK-IRALIIVERESQKGI 246
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+IG G LK + + AR DIE L V+LE+ VKVK++WR L++YGYG
Sbjct: 247 VIGAKGTQLKAIGSLARQDIEALLGSPVFLELWVKVKKDWRNRADSLRNYGYG 299
>gi|335429386|ref|ZP_08556284.1| GTPase Era [Haloplasma contractile SSD-17B]
gi|334889396|gb|EGM27681.1| GTPase Era [Haloplasma contractile SSD-17B]
Length = 308
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 180/290 (62%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST NQ++GQK++I+++K QTTR++I G+ + + Q I DTPGI + K
Sbjct: 18 TIVGRPNVGKSTFLNQVLGQKIAIMSDKAQTTRNKIQGVYTTDDAQYIFVDTPGIHKPK- 76
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L + M K + D ++ +V+A + D + E + + K P+LLV+NK D+
Sbjct: 77 HKLGTFMTKIALNTLNQVDLVLFMVNAEQKIGPGDRFIIEHLKNVKQ--PVLLVINKIDM 134
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I ++ + + Y K D E++P+SA G V + I + L GP YYP D V++HP
Sbjct: 135 IPKEQLLEIMAAYHKEFDFAEIVPISALTGENVSTLLGTIHSYLEEGPKYYPDDQVTDHP 194
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERF + E+IREK+ ++ R E+P++ V ++ ++ KD I V+ I+VE+ SQK I+I
Sbjct: 195 ERFIISELIREKVLVKTREEIPHSVAV-IIDDISKEEGKDIIDVQASIIVERPSQKGIVI 253
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + T AR DI+D L KV+LE+ VKV ++WR + L + GY
Sbjct: 254 GKNGSMLKDIGTLARKDIQDLLGSKVFLELWVKVVKDWRNKQTHLNNLGY 303
>gi|383451484|ref|YP_005358205.1| GTP-binding protein Era [Flavobacterium indicum GPTSA100-9]
gi|380503106|emb|CCG54148.1| GTP-binding protein Era [Flavobacterium indicum GPTSA100-9]
Length = 294
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 181/292 (61%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N M+G++LSI+T+K QTTRHRI GI + +YQ++ DTPGII K
Sbjct: 9 NIIGNPNVGKSTLMNAMVGERLSIITSKAQTTRHRIFGIVNEEDYQIVFSDTPGII-KPA 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L S MM V++A +AD ++ +V+ + + + + + K+P+LL+LNK D
Sbjct: 68 YELQSSMMDFVKTAFTDADILIYMVEVGEKELKDEAFFTKII---HAKVPVLLLLNKIDK 124
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ ++++ W EK + E+ P+SA VE + + I LP P +YPKD +++
Sbjct: 125 SNQELLEEQVQLWKEKVPNA-EIYPISALENFNVETVYNRIKELLPESPPFYPKDQLTDK 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
ERFFV E IREKI + Y E+PY+C+ V + ++ I+++ I+VE+ +QK I+
Sbjct: 184 TERFFVNETIREKILLNYDKEIPYSCE---VETEEFKEEENIIRIKSVIMVERETQKGII 240
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
IG G ALK + AR D+E F KK+++E+ VK+ ++WR LK +GY
Sbjct: 241 IGHKGAALKKVGMQAREDLEQFFAKKIHIELFVKINKDWRNSAYQLKRFGYN 292
>gi|229545169|ref|ZP_04433894.1| GTP-binding protein Era [Enterococcus faecalis TX1322]
gi|229309714|gb|EEN75701.1| GTP-binding protein Era [Enterococcus faecalis TX1322]
Length = 300
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 191/295 (64%), Gaps = 9/295 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
I + K H L M+++ +A D + +V A + + D+ + E + ++ P+ L+
Sbjct: 65 IHKPK-HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLI 121
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D + P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D
Sbjct: 122 INKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDD 181
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV-SYKTRPTAKDFIQVEIVVEKNSQ 347
+++HPE F V E+IREK+ + R+E+P++ V VV S K K +Q I+VE++SQ
Sbjct: 182 QITDHPEYFIVSELIREKVLLLTRDEIPHSVAV-VVDSMKRDENYKVHVQATIIVERDSQ 240
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGGK LK + T AR DIE L KVYLE+ VKV+++WR + L+ +GY
Sbjct: 241 KGIIIGKGGKMLKQIGTKARQDIEYLLDDKVYLELWVKVQKDWRDKKIYLQDFGY 295
>gi|315612998|ref|ZP_07887909.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 49296]
gi|315315108|gb|EFU63149.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 49296]
Length = 299
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|306825398|ref|ZP_07458738.1| GTP-binding protein Era [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|417940160|ref|ZP_12583448.1| GTP-binding protein Era [Streptococcus oralis SK313]
gi|304432336|gb|EFM35312.1| GTP-binding protein Era [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|343389041|gb|EGV01626.1| GTP-binding protein Era [Streptococcus oralis SK313]
Length = 299
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|345859663|ref|ZP_08812000.1| GTP-binding protein Era [Desulfosporosinus sp. OT]
gi|344327259|gb|EGW38700.1| GTP-binding protein Era [Desulfosporosinus sp. OT]
Length = 304
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 177/294 (60%), Gaps = 13/294 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PN GKSTL N ++GQK+ I+++KPQTTR+RI I + Q+I DTPGI + K
Sbjct: 15 SVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEERGQIIFLDTPGIHKPK- 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDHKDKLPILLVLN 230
H L M+ + + D I+ +VD E I E+L++ ++P +LVLN
Sbjct: 74 HKLGEYMVGKAKESMREVDVILYMVDLSAEYGPGEEFIIEMLKQ------TRVPCVLVLN 127
Query: 231 KKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
K DL+ E + +K++ + D ++PVSAK G +++ I +L GP YYP+D
Sbjct: 128 KVDLLASKEQLMRKIQQFSALVDFKAIVPVSAKTGENTDELLKVIFNQLSKGPMYYPEDE 187
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++ PERF + E++REK+ +E+P++ V + + T ++ IVVE++SQK
Sbjct: 188 VTDQPERFIMAELVREKVLQLTHDEIPHSIAVVIEEVAEKKTLVK-VRALIVVERDSQKG 246
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
I+IG GGK LK + AR+DIE L V+LE+ VKVK++WR L++YGYG
Sbjct: 247 IVIGAGGKQLKEIGRLARMDIEALLGSPVFLELWVKVKKDWRNRMDSLRNYGYG 300
>gi|401683636|ref|ZP_10815522.1| GTP-binding protein Era [Streptococcus sp. BS35b]
gi|418974874|ref|ZP_13522783.1| GTP-binding protein Era [Streptococcus oralis SK1074]
gi|383348245|gb|EID26204.1| GTP-binding protein Era [Streptococcus oralis SK1074]
gi|400187714|gb|EJO21908.1| GTP-binding protein Era [Streptococcus sp. BS35b]
Length = 299
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|443315233|ref|ZP_21044735.1| GTP-binding protein Era [Leptolyngbya sp. PCC 6406]
gi|442785174|gb|ELR95012.1| GTP-binding protein Era [Leptolyngbya sp. PCC 6406]
Length = 312
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 171/293 (58%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I + QTTR+R+ GI + E Q+I DTPG I K
Sbjct: 23 AIVGRPNVGKSTLMNQLIGQKIAITSPVAQTTRNRLRGILTTDEAQIIFVDTPG-IHKPH 81
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L +++ N R+A D ++ +VD A R D+ + E + + P+ L +NK DL
Sbjct: 82 HELGKVLVHNARTAIGAVDVVLFVVDGSTAAGRGDQFIAELLT--PAQTPVFLGMNKMDL 139
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPV---SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
++A + YE D P+ SA G+ D++ ++ L GP YYP D+V+
Sbjct: 140 CPEADLAATIASYEALA-ADHPWPICQFSATTAAGLPDLQQQLIMALEPGPYYYPPDLVT 198
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKI 349
+ PERF +GE+IRE+I R EVP++ + + + AK V I VE++SQK
Sbjct: 199 DQPERFIMGELIREQILHHTREEVPHSVAIAIDRVE---EAKSITHVLATIHVERDSQKG 255
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIGKGG LK + ++ARL ++ + KVYLE+ VKV+ WRQ L GY
Sbjct: 256 ILIGKGGSMLKTIGSSARLQMQKLITGKVYLELFVKVQPKWRQSRTRLAELGY 308
>gi|323343320|ref|ZP_08083547.1| GTP-binding protein Era [Prevotella oralis ATCC 33269]
gi|323095139|gb|EFZ37713.1| GTP-binding protein Era [Prevotella oralis ATCC 33269]
Length = 305
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 176/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 20 NIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTDDAQIVFSDTPGVLKPNY 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D +APE+ E L++ K +P+LL++NK D
Sbjct: 80 KLQESMLAFS-ESALTDADVLLYVTDVVEAPEKNIEFLDKV---KKMTIPVLLLINKIDQ 135
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + + E++P+SA+ G + + I LP P Y+ K+ +++ P
Sbjct: 136 TDQKTLGNIVEKWHQLLPNAEILPISAQNKFGTDMLLKRIKELLPESPPYFDKEQLTDKP 195
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI + Y E+PY+ +V V S+K I I VE+NSQK I+IG
Sbjct: 196 AKFFVSEIIREKILLYYDKEIPYSVEVVVESFK-EDRKHIHINAVIYVERNSQKGIIIGH 254
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F K VYLE VKV ++WR + L ++GY
Sbjct: 255 QGMALKKVSTEARKALERFFGKPVYLETFVKVDKDWRSSQKELNNFGYN 303
>gi|387626322|ref|YP_006062497.1| GTP-binding protein Era [Streptococcus pneumoniae INV104]
gi|417693889|ref|ZP_12343078.1| GTP-binding protein Era [Streptococcus pneumoniae GA47901]
gi|444382165|ref|ZP_21180369.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS8106]
gi|444384807|ref|ZP_21182898.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS8203]
gi|301794107|emb|CBW36513.1| GTP-binding protein Era homolog [Streptococcus pneumoniae INV104]
gi|332204972|gb|EGJ19037.1| GTP-binding protein Era [Streptococcus pneumoniae GA47901]
gi|444251567|gb|ELU58036.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS8203]
gi|444253125|gb|ELU59584.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS8106]
Length = 299
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
+RF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 DRFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|419843891|ref|ZP_14367196.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779]
gi|385702315|gb|EIG39460.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779]
Length = 299
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|379705760|ref|YP_005204219.1| GTP-binding protein era [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682459|gb|AEZ62748.1| GTP-binding protein era [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 298
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYRTDTEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + +P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIIERL--KAANIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLLNILKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V V S K P T K +I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKILKLTEQEVPHSVAVIVDSMKRDPETDKVYIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KKGAMLKKIGTMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|306829343|ref|ZP_07462533.1| GTP-binding protein Era [Streptococcus mitis ATCC 6249]
gi|322374470|ref|ZP_08048984.1| GTP-binding protein Era [Streptococcus sp. C300]
gi|414158333|ref|ZP_11414627.1| GTPase Era [Streptococcus sp. F0441]
gi|419779053|ref|ZP_14304934.1| GTP-binding protein Era [Streptococcus oralis SK10]
gi|419780420|ref|ZP_14306270.1| GTP-binding protein Era [Streptococcus oralis SK100]
gi|304428429|gb|EFM31519.1| GTP-binding protein Era [Streptococcus mitis ATCC 6249]
gi|321279970|gb|EFX57009.1| GTP-binding protein Era [Streptococcus sp. C300]
gi|383185579|gb|EIC78075.1| GTP-binding protein Era [Streptococcus oralis SK100]
gi|383186817|gb|EIC79282.1| GTP-binding protein Era [Streptococcus oralis SK10]
gi|410870878|gb|EKS18835.1| GTPase Era [Streptococcus sp. F0441]
Length = 299
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|15672333|ref|NP_266507.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis Il1403]
gi|125623240|ref|YP_001031723.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris MG1363]
gi|281490898|ref|YP_003352878.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis KF147]
gi|385829924|ref|YP_005867737.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis CV56]
gi|389853568|ref|YP_006355812.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris NZ9000]
gi|418038565|ref|ZP_12676894.1| hypothetical protein LLCRE1631_01701 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|61223689|sp|P0A3C1.1|ERA_LACLA RecName: Full=GTPase Era
gi|61223690|sp|P0A3C2.1|ERA_LACLM RecName: Full=GTPase Era
gi|8163994|gb|AAF73946.1|AF233268_1 GTP-binding protein Era [Lactococcus lactis subsp. cremoris MG1363]
gi|12723220|gb|AAK04449.1|AE006272_3 GTP-binding protein Era [Lactococcus lactis subsp. lactis Il1403]
gi|124492048|emb|CAL96976.1| GTP-binding protein era homolog [Lactococcus lactis subsp. cremoris
MG1363]
gi|281374656|gb|ADA64176.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis KF147]
gi|300069990|gb|ADJ59390.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris NZ9000]
gi|326405932|gb|ADZ63003.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis CV56]
gi|354693213|gb|EHE92990.1| hypothetical protein LLCRE1631_01701 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672428|dbj|BAL50319.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis IO-1]
Length = 303
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 175/290 (60%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++ DTPGI K
Sbjct: 12 AILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGI-HKPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S D ++ +V A + + ++ E + K ++P++LV+NK D
Sbjct: 71 NALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVPVILVVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P + + + Y + EV+P+SAK G+ E + D + KL GP Y+P+D +++HP
Sbjct: 129 IHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQYFPEDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI + R EVP++ V + T K I I+VE+ SQK I++G
Sbjct: 189 ERFLVSEMIREKILLLTREEVPHSIAVTTDQMTRDEETGKIHIMATIIVERKSQKGIILG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
KGG ++ + AR DIE L KVYLE VK+K +WR + L +GY
Sbjct: 249 KGGDMIRKIGKMARRDIEIMLGDKVYLETWVKIKNDWRDRKMDLADFGYN 298
>gi|358464761|ref|ZP_09174719.1| ribosome biogenesis GTPase Era [Streptococcus sp. oral taxon 058
str. F0407]
gi|417794352|ref|ZP_12441610.1| GTP-binding protein Era [Streptococcus oralis SK255]
gi|334270196|gb|EGL88603.1| GTP-binding protein Era [Streptococcus oralis SK255]
gi|357066290|gb|EHI76440.1| ribosome biogenesis GTPase Era [Streptococcus sp. oral taxon 058
str. F0407]
Length = 299
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|422857990|ref|ZP_16904640.1| GTP-binding protein Era [Streptococcus sanguinis SK1057]
gi|327460961|gb|EGF07294.1| GTP-binding protein Era [Streptococcus sanguinis SK1057]
Length = 299
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPVDEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|312863009|ref|ZP_07723247.1| ribosome biogenesis GTPase Era [Streptococcus vestibularis F0396]
gi|322517151|ref|ZP_08070035.1| GTP-binding protein Era [Streptococcus vestibularis ATCC 49124]
gi|311100545|gb|EFQ58750.1| ribosome biogenesis GTPase Era [Streptococcus vestibularis F0396]
gi|322124301|gb|EFX95812.1| GTP-binding protein Era [Streptococcus vestibularis ATCC 49124]
Length = 299
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 183/290 (63%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + K D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|262375525|ref|ZP_06068758.1| GTP-binding protein Era [Acinetobacter lwoffii SH145]
gi|262309779|gb|EEY90909.1| GTP-binding protein Era [Acinetobacter lwoffii SH145]
Length = 342
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 171/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 43 AIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 102
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K D +LE+ ++P++LV+NK D
Sbjct: 103 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTPNDDLVLEKL---KNAEMPVILVINKLDT 159
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E + EK + E++PVSA G +E +RD I LP P Y D +++
Sbjct: 160 FENKNEALPLIREREKLMNFAEIVPVSALRGANLEHLRDTIAKYLPFQPPLYSLDQLTDR 219
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-----------PTAKDFIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT A +I I V
Sbjct: 220 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEPVLNEKTGRMKAACTYIDATIFV 279
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ SQK I+IG+ G LK + ARLD+E ++K+ L + VKVK W DE LK GY
Sbjct: 280 DRPSQKAIVIGEKGVKLKKIGMDARLDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 339
Query: 403 G 403
Sbjct: 340 S 340
>gi|336053995|ref|YP_004562282.1| GTP-binding protein Era [Lactobacillus kefiranofaciens ZW3]
gi|333957372|gb|AEG40180.1| GTP-binding protein Era [Lactobacillus kefiranofaciens ZW3]
Length = 301
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 168/291 (57%), Gaps = 10/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I ++KPQTTR+RI GI + + Q++ DTPGI K
Sbjct: 12 ALVGRPNVGKSTLMNYLVGQKVAITSSKPQTTRNRISGIYTSDQMQVVFVDTPGIF-KPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLV---DACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
LD M K S+ + D ++ +V D K + I +L+E +P+ LV+NK
Sbjct: 71 SKLDDYMDKASLSSLNDVDLVLFMVEPEDIGKGDQYIASLLKEVT------VPVFLVINK 124
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D I P ++ ++ Y K E++P+SA G G+ED+ I LP GP YY D ++
Sbjct: 125 VDQIHPNKLLPIIDSYNKLDGFKEILPISATQGIGIEDLLKTIKQYLPEGPQYYGADQIT 184
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ PE F V E+IRE+I EVP+A V V K I+ I VEK+ QK I+
Sbjct: 185 DRPEYFVVAELIREQILRLTSQEVPHATAVAVDQMNKHQNGKLLIEATIYVEKDGQKGII 244
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK GK LK + +R +IE L +KV L + VKV+ NWR D LK GY
Sbjct: 245 IGKAGKMLKQIGINSRKEIEHLLGEKVNLRLWVKVQHNWRSDPSFLKLIGY 295
>gi|417935679|ref|ZP_12578996.1| GTP-binding protein Era [Streptococcus infantis X]
gi|343402588|gb|EGV15093.1| GTP-binding protein Era [Streptococcus infantis X]
Length = 299
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q+I DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIIFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|322387708|ref|ZP_08061317.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779]
gi|321141575|gb|EFX37071.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779]
Length = 311
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 21 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 80
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 81 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 137
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 138 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPSDQITDHP 197
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 198 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 257
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 258 KGGAMLKKIGTMARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 306
>gi|421277242|ref|ZP_15728062.1| GTP-binding protein Era [Streptococcus mitis SPAR10]
gi|395876523|gb|EJG87599.1| GTP-binding protein Era [Streptococcus mitis SPAR10]
Length = 299
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|342732211|ref|YP_004771050.1| GTP-binding protein Era [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417966028|ref|ZP_12607470.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-4]
gi|417968350|ref|ZP_12609379.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-co]
gi|418016387|ref|ZP_12655952.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372465|ref|ZP_12964557.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329666|dbj|BAK56308.1| GTP-binding protein Era [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506722|gb|EGX29016.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|380335332|gb|EIA25550.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-4]
gi|380339865|gb|EIA28533.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-co]
gi|380342134|gb|EIA30579.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 294
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 167/289 (57%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+ NVGKSTL N I QKLSIV++KPQTTR+ ++GI + +YQ++ DTPG K
Sbjct: 8 SIVGRANVGKSTLLNNFINQKLSIVSSKPQTTRNNVIGILNNDDYQIVFTDTPGY-HKPR 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K++ S D I+ + + K ++D + + + D +P + VLNK D
Sbjct: 67 YKLGDYMIKSISSGLKETDVIIFVANIRKEIPKLDLEILDKIKDLS--IPRIFVLNKCDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I +I L Y K + DE IP+SA G + + + IL LP GP YY D + +
Sbjct: 125 ISSKDIMDTLSKYSKIVNFDEYIPISALNGKNINKLLELILKYLPNGPKYYDSDWTATNN 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
E+FF+ EI+REKI +EVP+ V ++S K + I+ I +K + K I+IG
Sbjct: 185 EKFFISEIVREKILKLIHDEVPHGVGVEIISMKYDDQKNRYNIEGNIFCDKETHKAIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK ++T +R D+E FL KVY+ + VKV+ NWR D LK GY
Sbjct: 245 KNGDMLKRISTYSRQDMEKFLGSKVYIRLWVKVRNNWRDDNNHLKSLGY 293
>gi|116511210|ref|YP_808426.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris SK11]
gi|385837381|ref|YP_005875011.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris A76]
gi|414073652|ref|YP_006998869.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris
UC509.9]
gi|122940350|sp|Q031W8.1|ERA_LACLS RecName: Full=GTPase Era
gi|116106864|gb|ABJ72004.1| GTPase [Lactococcus lactis subsp. cremoris SK11]
gi|358748609|gb|AEU39588.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris A76]
gi|413973572|gb|AFW91036.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 303
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 175/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++ DTPGI K
Sbjct: 12 AILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGI-HKPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S D ++ +V A + + ++ E + K ++P++LV+NK D
Sbjct: 71 NALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVPVILVVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P + + + Y + EV+P+SAK G+ E + D + KL GP Y+P+D +++HP
Sbjct: 129 IHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQYFPEDQITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI + R EVP++ V + T K I I+VE+ SQK I++G
Sbjct: 189 ERFLVSEMIREKILLLTREEVPHSIAVTTDQMTRDEETGKIHIMATIIVERKSQKGIILG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG ++ + AR DIE L KVYLE VK+K +WR + L +GY
Sbjct: 249 KGGDMIRKIGKMARRDIEIMLGDKVYLETWVKIKNDWRDRKMDLADFGY 297
>gi|291542200|emb|CBL15310.1| GTP-binding protein Era [Ruminococcus bromii L2-63]
Length = 305
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 176/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKS++ N+++GQK++IV++KPQTTR+RI G+ + EYQ++ +DTPG+ + K
Sbjct: 14 AIVGRPNVGKSSILNRLMGQKIAIVSSKPQTTRNRITGVLTQGEYQLVFFDTPGMHKPKT 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L M+++V + DC +++V+A K P + L E + +P +L +NK D
Sbjct: 74 S-LGKYMVRSVNESVGGVDCCMLVVEAGKEPGDTELNLIEKFKSME--MPAILAINKIDT 130
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K E + K++ Y D D V+PVSA+ G+G+ ++ D + + G ++ D +++
Sbjct: 131 LKEKEELMKQIARYSLLYDFDAVVPVSAQDGNGMNELLDELKKQAGEGGHFFDDDTLTDQ 190
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PER V EIIREKI E+P+ V + KTR I I EK + K I+IG
Sbjct: 191 PERVIVAEIIREKILRLCDREIPHGTAVVIEKMKTRDNGMLDIDATIFCEKETHKRIIIG 250
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK ++T AR DIE F KV+L+ VKVKE+WR +L+++GY
Sbjct: 251 KNGSMLKKISTFARQDIERFFDCKVFLQTWVKVKEDWRNRAQILQNFGY 299
>gi|168485921|ref|ZP_02710429.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1087-00]
gi|418184787|ref|ZP_12821334.1| GTP-binding protein Era [Streptococcus pneumoniae GA47283]
gi|419510592|ref|ZP_14050236.1| GTP-binding protein Era [Streptococcus pneumoniae NP141]
gi|419530196|ref|ZP_14069726.1| GTP-binding protein Era [Streptococcus pneumoniae GA40028]
gi|421212944|ref|ZP_15669905.1| GTP-binding protein Era [Streptococcus pneumoniae 2070108]
gi|421215200|ref|ZP_15672128.1| GTP-binding protein Era [Streptococcus pneumoniae 2070109]
gi|183571044|gb|EDT91572.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1087-00]
gi|353851323|gb|EHE31319.1| GTP-binding protein Era [Streptococcus pneumoniae GA47283]
gi|379574195|gb|EHZ39139.1| GTP-binding protein Era [Streptococcus pneumoniae GA40028]
gi|379633785|gb|EHZ98354.1| GTP-binding protein Era [Streptococcus pneumoniae NP141]
gi|395580531|gb|EJG41012.1| GTP-binding protein Era [Streptococcus pneumoniae 2070108]
gi|395581333|gb|EJG41805.1| GTP-binding protein Era [Streptococcus pneumoniae 2070109]
Length = 299
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+ E++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMAERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|408490195|ref|YP_006866564.1| GTP-binding protein Era [Psychroflexus torquis ATCC 700755]
gi|408467470|gb|AFU67814.1| GTP-binding protein Era [Psychroflexus torquis ATCC 700755]
Length = 273
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 175/285 (61%), Gaps = 25/285 (8%)
Query: 129 NQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSA 188
N +G+KLSI+T+K QTTRHRILGI +G ++QM+L DTPGII K + L + MM V+SA
Sbjct: 2 NAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMVLSDTPGII-KPAYGLQNSMMDFVKSA 60
Query: 189 GINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILLVLNKKDLIKPGE-- 239
+AD ++ LV EI E+ + D ++P+LL+LNK D K E
Sbjct: 61 FQDADVLLYLV----------EIGEKALKDESFFTKLQHAEMPVLLLLNKID--KGNEEL 108
Query: 240 -IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFF 298
++++ W E+ + E+ +SA GV ++ + IL LP PA+YPKD +++ PERFF
Sbjct: 109 LLSQQKHWQEQLPNA-EIFAISALENFGVTEVFNRILELLPESPAFYPKDQLTDKPERFF 167
Query: 299 VGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKA 358
V E IREKI + Y+ E+PY+ +V S++ + I+ I+VE+ SQK I++G G A
Sbjct: 168 VNEKIREKILIHYKKEIPYSVEVETESFEESDSIIH-IRSVIMVERESQKAIILGHKGSA 226
Query: 359 LKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+K + T +R D+E F KK++LE VKV +NWR D L+ +GY
Sbjct: 227 IKRVGTESRKDLEKFFDKKIHLETYVKVNKNWRNDGKQLRRFGYN 271
>gi|417937716|ref|ZP_12581016.1| GTP-binding protein Era [Streptococcus infantis SK970]
gi|343391980|gb|EGV04553.1| GTP-binding protein Era [Streptococcus infantis SK970]
Length = 436
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 185/305 (60%), Gaps = 4/305 (1%)
Query: 100 YEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY 159
++I E ++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + +
Sbjct: 131 FKIIEVTMTFKSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKE 190
Query: 160 QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH 219
Q++ DTPGI + K + D M+++ S D ++ +V A + + D+++ E +
Sbjct: 191 QIVFIDTPGIHKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--K 247
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 279
K+P++LV+NK D + P ++ +++ + D E++P+SA G+ V + D + L
Sbjct: 248 AAKVPVILVVNKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLE 307
Query: 280 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQV 338
G Y+P D +++HPERF V E+IREK+ R E+P++ V V S K T K I+
Sbjct: 308 EGFQYFPSDQITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRA 367
Query: 339 EIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLK 398
I+VE++SQK I+IGKGG LK + T AR DIE L KV+LE VKVK+NWR + L
Sbjct: 368 TIMVERDSQKGIIIGKGGAMLKKIGTMARKDIELMLGDKVFLETWVKVKKNWRDKKLDLA 427
Query: 399 HYGYG 403
+GY
Sbjct: 428 DFGYN 432
>gi|419707453|ref|ZP_14234937.1| GTP-binding protein [Streptococcus salivarius PS4]
gi|383282799|gb|EIC80779.1| GTP-binding protein [Streptococcus salivarius PS4]
Length = 299
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 183/290 (63%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVTADEPRGKGDDMIIERL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|384135808|ref|YP_005518522.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289893|gb|AEJ44003.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 298
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 172/289 (59%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G K++I++++PQTTR+RI G+ + QMI DTPGI + K
Sbjct: 9 ALIGRPNVGKSTLLNALVGHKVAIMSSRPQTTRNRIRGVRTTETSQMIFIDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ D IV++VDA + + + + + + P++L LNK D
Sbjct: 68 HRLGEYMVDAALKTLNEVDVIVMVVDASSPVHPTEHEIAKQL--ERVRTPVILALNKVDA 125
Query: 235 IKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ + K++E Y+ DE +P+SA G V+ + + I +LP GP YYP D++++
Sbjct: 126 LEDRALVLKRIEEYQALRPFDEYVPISALRGEQVDLLAEIIEKRLPEGPKYYPDDMITDQ 185
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE F + EI+REK+ + R+EVP++ V V + R + ++ I E+ SQK ILIG
Sbjct: 186 PESFIISEIVREKVLLLTRDEVPHSVMVAVEHMERRSSDTLYVSAVIYTERESQKAILIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G+ LK + AR ++E ++YLE+ VKVK +WR LL +G+
Sbjct: 246 KQGQMLKRVGEMARHELEALFGNRIYLELWVKVKRDWRNKPALLHQFGF 294
>gi|449953346|ref|ZP_21808973.1| GTP-binding protein Era [Streptococcus mutans 4VF1]
gi|450137471|ref|ZP_21871680.1| GTP-binding protein Era [Streptococcus mutans NLML1]
gi|449172059|gb|EMB74700.1| GTP-binding protein Era [Streptococcus mutans 4VF1]
gi|449235252|gb|EMC34220.1| GTP-binding protein Era [Streptococcus mutans NLML1]
Length = 299
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 182/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K +I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIYIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|326203513|ref|ZP_08193377.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782]
gi|325986333|gb|EGD47165.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782]
Length = 298
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 176/290 (60%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PNVGKSTL N + GQK++I+++KPQTTR+ I G+ + E Q+IL DTPGI + K
Sbjct: 9 SVIGRPNVGKSTLLNTITGQKIAIMSDKPQTTRNTIRGVITNKECQLILIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERID-EILEEGVGDHKDKLPILLVLNKK 232
+ + M+ NV S I D ++ LV+A P D I+++ + K P+ L+LNK
Sbjct: 69 KLGEYMV--NVASETIKEVDLVLFLVEANAQPGAQDINIIQQL---KQVKTPVFLILNKV 123
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DL+ ++ ++ Y K + +IP+SA G++ I L +P GP ++ +D++++
Sbjct: 124 DLVSKEKLLAIIDSYSKLMNFKAIIPISALKNDGIDIILKEALDLIPEGPQFFSEDMLTD 183
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PE+ E+IREK+ + +EVP+ V V S+K R IQ I EK++ K I+I
Sbjct: 184 QPEKVIAAEMIREKVLLNLDDEVPHGVGVEVTSFKEREDGLINIQATIYCEKSTHKGIII 243
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + +AAR +IE L K++LE+ VKVK +WR + +LK GY
Sbjct: 244 GKQGSMLKKIGSAARYEIERLLDTKIFLELWVKVKPDWRNSDNMLKTLGY 293
>gi|395244614|ref|ZP_10421575.1| GTP-binding protein Era [Lactobacillus hominis CRBIP 24.179]
gi|394483115|emb|CCI82583.1| GTP-binding protein Era [Lactobacillus hominis CRBIP 24.179]
Length = 300
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 177/298 (59%), Gaps = 18/298 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I++ +PQTTR++I G+ + Q++ DTPGI + K
Sbjct: 11 ALIGRPNVGKSTLLNYLVGQKVAIMSPQPQTTRNKISGVYTDDHEQIVFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
+ LD M K+ SA D ++ +V+ KA G GDH K K P+ L
Sbjct: 70 NKLDDFMDKSSYSALDEVDVVLFMVEPEKA----------GKGDHYIADLLKKIKKPVFL 119
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D I P ++ + ++ Y++ D E++P+SA G+ V+++ I LP+GP +Y
Sbjct: 120 VINKIDTIHPDKLLEIIDSYKELGDFTEIVPISASQGNNVDELIKTITKYLPVGPQFYDA 179
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++ PE F V E+IRE++ EVP+A V V + K I+ I VE++ Q
Sbjct: 180 DQITDRPEYFIVAELIREQVLRLTHEEVPHATAVVVDRMRDHENGKLQIEATIYVERDGQ 239
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
K I+IGK G LK + AAR +IE+ L +KV L + VKV++NWR D LK GY +
Sbjct: 240 KGIVIGKRGSMLKQIGIAARKEIENLLGEKVNLRLWVKVQKNWRSDPAFLKSIGYNAK 297
>gi|356472767|gb|AET10448.1| putative GTP-binding protein Era [Streptococcus australis]
Length = 299
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|171780162|ref|ZP_02921066.1| hypothetical protein STRINF_01950 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281510|gb|EDT46945.1| ribosome biogenesis GTPase Era [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 298
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + +P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIIERL--KAANIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVEKLLNILKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKILKLTEQEVPHSVAVIVDSMKRDPETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KKGAMLKKIGTMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|374338497|ref|YP_005095212.1| GTP-binding protein Era [Streptococcus macedonicus ACA-DC 198]
gi|372284612|emb|CCF02900.1| GTP-binding protein Era [Streptococcus macedonicus ACA-DC 198]
Length = 298
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N+++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNRVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 67 NALGDFMVESAYSTLREVDTVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ VE + + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQINDFRSQMDFKEIVPISALQGNNVETLMNILKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKILKLTEQEVPHSVAVIVESMKRDPETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KKGAMLKKIGKMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|347534452|ref|YP_004841122.1| GTP-binding protein Era [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504508|gb|AEN99190.1| GTP-binding protein era-like protein [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 303
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 175/295 (59%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N+++GQK++I+++K QTTR++I G+ + + Q++ DTPGI K
Sbjct: 13 AIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTKDAQIVFLDTPGI-HKPE 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
+ LD M + S+ + ++ +V A + G GD+ K +P+ L
Sbjct: 72 NKLDEYMDASALSSLREVEAVLFMVSATET---------RGAGDNYIIDQLKKVDVPVYL 122
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
++NK D I P ++ ++ Y K D EV P+SA G+ V+++ ++ LP GP YYP
Sbjct: 123 IINKIDEINPDKLLVIMDTYRKAYDWAEVFPISALRGNNVDELIGNLIDHLPEGPQYYPD 182
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D V++HPERF V EI+REKI R E+P++ V V S KT K I+ I+V++ Q
Sbjct: 183 DQVTDHPERFIVQEIVREKILENTRQEIPHSVAVYVESMKTNENGKVQIEASIIVDREGQ 242
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGG LK ++ AR +IE L KV L++ ++V+ WR + L + GY
Sbjct: 243 KRIIIGKGGALLKYISIGARREIEKLLGSKVNLKLWIRVQSGWRDKDTALNNLGY 297
>gi|332879047|ref|ZP_08446756.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357047628|ref|ZP_09109226.1| ribosome biogenesis GTPase Era [Paraprevotella clara YIT 11840]
gi|332682996|gb|EGJ55884.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355529316|gb|EHG98750.1| ribosome biogenesis GTPase Era [Paraprevotella clara YIT 11840]
Length = 294
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 176/290 (60%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q+ DTPG+++
Sbjct: 9 NIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTEDMQICFSDTPGVLKPNY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ + LE+ K +P+LL++NK D+
Sbjct: 69 KLQESMLNFS-ESALQDADVLLYVTDMVETPDKNGDFLEKV---SKMDVPVLLLINKIDV 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
E+ K+E + E+IP+SA ++ + + I LP P Y+ KD ++ P
Sbjct: 125 SNQQELTSKVEAWHAVLPKAEIIPISALCKFNIDTVLNRIKELLPDSPPYFGKDQWTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
RFFV EIIREKI + Y E+PY+ +V V +K AK I V I VE++SQK I+IG
Sbjct: 185 ARFFVTEIIREKILLYYDKEIPYSVEVVVEQFKEE--AKSIHINVVIYVERDSQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F K +YLE VKV ++WR E LK +GY
Sbjct: 243 HRGVALKKVSTEARKSLEKFFGKSIYLETFVKVDKDWRSSERALKSFGYN 292
>gi|255972122|ref|ZP_05422708.1| GTP-binding protein Era [Enterococcus faecalis T1]
gi|255963140|gb|EET95616.1| GTP-binding protein Era [Enterococcus faecalis T1]
Length = 300
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 189/289 (65%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+++ +A D + +V A + + D+ + E + ++ P+ L++NK D
Sbjct: 70 HCLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLIINKIDK 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D +++HP
Sbjct: 128 VHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNSQKIILIG 353
E F V E+IREK+ + R+E+P++ V V S K R K +Q I+VE++SQK I+IG
Sbjct: 188 EYFIVSELIREKVLLLTRDEIPHSVAVVVDSMK-RDENDKVHVQATIIVERDSQKGIIIG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGGK LK + T AR DIE L KVYLE+ VKV+++WR + L+ +GY
Sbjct: 247 KGGKMLKQIGTKARQDIEYLLDDKVYLELWVKVQKDWRDKKIYLQDFGY 295
>gi|419479796|ref|ZP_14019603.1| GTP-binding protein Era [Streptococcus pneumoniae GA19101]
gi|419499486|ref|ZP_14039185.1| GTP-binding protein Era [Streptococcus pneumoniae GA47597]
gi|379570962|gb|EHZ35921.1| GTP-binding protein Era [Streptococcus pneumoniae GA19101]
gi|379602540|gb|EHZ67311.1| GTP-binding protein Era [Streptococcus pneumoniae GA47597]
gi|429317780|emb|CCP37582.1| GTP-binding protein Era homolog [Streptococcus pneumoniae
SPN034156]
Length = 299
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADLGY 294
>gi|147677230|ref|YP_001211445.1| GTPase [Pelotomaculum thermopropionicum SI]
gi|146273327|dbj|BAF59076.1| GTPase [Pelotomaculum thermopropionicum SI]
Length = 300
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 173/295 (58%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+ NVGKSTL N ++G+K++I++ KPQTTR++IL + + + Q++ DTPG + K
Sbjct: 12 AIIGRTNVGKSTLLNSLLGRKVAIMSEKPQTTRNKILCVLTREDAQVVFLDTPGFHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L +++ D ++ LV+A + P G GDH K P+LL
Sbjct: 71 HKLGEHLVQVALRTLKEVDLVLFLVEAGQPP---------GPGDHYVIKQFAGLKTPVLL 121
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK DL++ E+ +E Y E++PVSA G + + + ++ LP GP YYP+
Sbjct: 122 VINKIDLVRREELLPLIEQYSGLFGFAEIVPVSALTGENLPRLLEVVVRYLPAGPKYYPE 181
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D++++ PE F + E+IREK+ EVP++ V V K RP ++ I EK SQ
Sbjct: 182 DVITDRPESFIMAELIREKVLHLTSQEVPHSVAVVVEELKERPNNVVAVRAVIYTEKESQ 241
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIGKGG+ LK + AR ++E L K+YLE+ VKV+ +WR EG L++ GY
Sbjct: 242 KGILIGKGGQMLKKIGQMAREEMEVLLGSKIYLELWVKVRPDWRNKEGQLRNLGY 296
>gi|90412087|ref|ZP_01220094.1| GTP-binding protein Era [Photobacterium profundum 3TCK]
gi|90327065|gb|EAS43444.1| GTP-binding protein Era [Photobacterium profundum 3TCK]
Length = 301
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 174/295 (58%), Gaps = 5/295 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ + DTPG+
Sbjct: 6 HCGFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVFIDTPGL 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
++ ++ +M + S+ + + ++ LVD + +L + K LP +L++
Sbjct: 66 HIEEKRTINRLMNRAASSSLTDVELVLFLVDGTVWTADDEMVLNKL---KKSGLPTVLLI 122
Query: 230 NKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D +K G++ L+ K D +V+P+SAK G V+ + + +P G Y+P+D
Sbjct: 123 NKVDNVKEKGDLFPHLDALSKKMDFVDVVPISAKSGTNVDAVEKIVRAHIPEGEYYFPED 182
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 347
V++ +RF EIIREK+ E+PY+ V + + P F I I+VE+ Q
Sbjct: 183 YVTDRSQRFMASEIIREKLMRFLGEELPYSVTVEIERFDYNPKMDGFDINGLILVERKGQ 242
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ++IGK G+ +K++ AR+D+ED ++KVYLE+ VKVK W DE L+ GY
Sbjct: 243 KKMVIGKNGEKMKVIGREARIDMEDLFERKVYLELWVKVKSGWADDERALRSLGY 297
>gi|406659427|ref|ZP_11067565.1| GTP-binding protein Era [Streptococcus iniae 9117]
gi|405577536|gb|EKB51684.1| GTP-binding protein Era [Streptococcus iniae 9117]
Length = 299
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + DE++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDEMIMERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ VE + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRSHMDFKEVVPISALQGNNVETLLQLLTDNLDEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTKQEIPHSVAVVIESMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|417918417|ref|ZP_12561969.1| GTP-binding protein Era [Streptococcus parasanguinis SK236]
gi|342828872|gb|EGU63238.1| GTP-binding protein Era [Streptococcus parasanguinis SK236]
Length = 299
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADELRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|433448754|ref|ZP_20411620.1| GTPase Era [Weissella ceti NC36]
gi|429539681|gb|ELA07717.1| GTPase Era [Weissella ceti NC36]
Length = 302
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 177/295 (60%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + + Q++ DTPGI K
Sbjct: 12 AIVGRPNVGKSTLMNEMIGEKIAIMSPKAQTTRNKIQGIYTNDDGQIVFIDTPGI-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILL 227
+ L M+K S+ AD I +V+A + + G GD P+ L
Sbjct: 71 NGLGDFMVKTAMSSLGEADMIWFVVNADQ---------KRGAGDDFIINRLKTVDTPVYL 121
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
++NK DL+ P E+ ++ Y + + E+ P+SA G GV ++ + + + GP YYP+
Sbjct: 122 IINKVDLVHPQELLAIIDDYRQQMEFAEIFPISALDGDGVPELLNVTMGHMEEGPQYYPE 181
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +++HPERF + E+IREK+ R EVP++ V + + + AK IQ IVVE+ +Q
Sbjct: 182 DQITDHPERFIMAELIREKVLQLTRQEVPHSVAVVIETIEREGDAKLHIQAAIVVERPTQ 241
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGG +K + T AR DIE + +K++LE+ VKV++ WR L +GY
Sbjct: 242 KNIVIGKGGAMIKEIGTRARKDIERLMGEKIFLELWVKVEDRWRDKPQSLNAFGY 296
>gi|255525312|ref|ZP_05392252.1| GTP-binding protein Era [Clostridium carboxidivorans P7]
gi|296188181|ref|ZP_06856573.1| GTP-binding protein Era [Clostridium carboxidivorans P7]
gi|255510984|gb|EET87284.1| GTP-binding protein Era [Clostridium carboxidivorans P7]
gi|296047307|gb|EFG86749.1| GTP-binding protein Era [Clostridium carboxidivorans P7]
Length = 293
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 173/295 (58%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+ KPQTTR+ I I + ++Q++ DTPGI + K
Sbjct: 8 TIIGRPNVGKSTLLNSIMGEKLSIVSCKPQTTRNNIQTILTEKDFQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILL 227
H L M+K + + D I+ L + PE DEI G GD + +P+ L
Sbjct: 67 HKLGEFMVKIAQDSIKEVDLILFLTN----PE--DEI---GKGDMYILEQLKECNVPVFL 117
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
VLNK D +AK L+ Y K E+IP+SA G V+++++ ++ + GP YYP+
Sbjct: 118 VLNKIDENTQERVAKTLDNYSKVFSFAEIIPISALKGKNVDELKELMVKYMHEGPKYYPE 177
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D++++ ERF V E IREK EVP+ V ++S K I I+ EK+S
Sbjct: 178 DMITDQQERFVVAETIREKALRLLSQEVPHGTAVEIISMKKDEKGMYHIDATILCEKDSH 237
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGK G LK ++T AR DIE FLQ +V L++ VKVK+ WR +LK GY
Sbjct: 238 KGIIIGKNGSMLKKISTYARQDIEKFLQTRVNLKLWVKVKKEWRDSSSMLKELGY 292
>gi|282878064|ref|ZP_06286869.1| GTP-binding protein Era [Prevotella buccalis ATCC 35310]
gi|281299804|gb|EFA92168.1| GTP-binding protein Era [Prevotella buccalis ATCC 35310]
Length = 293
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 174/290 (60%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M + M+ + SA +AD ++ + D + PE+ + LE+ +P++LV+NK D
Sbjct: 68 KMQEYMLAFS-ESALADADILLYVTDVVEDPEKNADFLEKV---RTMTIPVILVINKIDA 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + +E + E++P+SA GV+ + I LP P Y+ KD +++ P
Sbjct: 124 SNQKTVGQLVEKWHALLPNAEILPISAANKFGVDMLLKRIQELLPDSPPYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
+FFV EIIREKI + Y E+PY+ +V V +K +AK I I VE+ SQK I+IG
Sbjct: 184 AKFFVSEIIREKILLYYDKEIPYSVEVRVEQFKE--SAKQIHINAVIYVERESQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KKVYLE VKV ++WR + L +GY
Sbjct: 242 HQGVALKKVSTEARKTLEKFFDKKVYLETFVKVDKDWRSSQKELSSFGYN 291
>gi|383937508|ref|ZP_09990764.1| GTP-binding protein Era [Streptococcus pseudopneumoniae SK674]
gi|418969048|ref|ZP_13520206.1| GTP-binding protein Era [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383352473|gb|EID30169.1| GTP-binding protein Era [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383715595|gb|EID71545.1| GTP-binding protein Era [Streptococcus pseudopneumoniae SK674]
Length = 299
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KATKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQIDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDCMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|78188547|ref|YP_378885.1| GTP-binding protein Era [Chlorobium chlorochromatii CaD3]
gi|78170746|gb|ABB27842.1| GTP-binding protein Era [Chlorobium chlorochromatii CaD3]
Length = 305
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 177/298 (59%), Gaps = 16/298 (5%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PN GKSTL N ++ KLSIVT KPQTTR +I GI + Q+I DTPGI++ +
Sbjct: 13 IIGQPNAGKSTLLNALLDFKLSIVTPKPQTTRKKITGIYNSERCQIIFLDTPGILKPRQK 72
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERID-----EILEEGVGDHKDKLPILLVLN 230
+ +SM+ VRS +AD ++ L+ E D E+ E + P++ VLN
Sbjct: 73 LHESML-GVVRSTVTDADVLIALLPYTGTAELFDRSFAAELFTEWILPSGK--PVVAVLN 129
Query: 231 KKDLIKPGE--IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
K DL E A+ W E++ + V+ VSA + + + LPL YP +
Sbjct: 130 KSDLASQEEQKAAEAFVW-EQWKPTN-VLSVSALKRKNLTPLISALYPFLPLTEPLYPDE 187
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIVVEK 344
+S PERFFV E+IREKIFM Y E+PY+ +V V ++ + P+ K+FI+ IVVE+
Sbjct: 188 ALSTAPERFFVSELIREKIFMLYGAEIPYSTEVVVDEFREQHDDDPSRKEFIRCSIVVER 247
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++QK I+IGKGG ALK L AR IE+ L + VYLE+ VKV+ +WR+ G+LK +GY
Sbjct: 248 DTQKQIIIGKGGAALKKLGQLARKAIEEMLGRPVYLELFVKVRPDWRKKSGMLKSFGY 305
>gi|374997403|ref|YP_004972902.1| GTP-binding protein Era [Desulfosporosinus orientis DSM 765]
gi|357215769|gb|AET70387.1| GTP-binding protein Era [Desulfosporosinus orientis DSM 765]
Length = 313
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 175/293 (59%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PN GKSTL N ++GQK+ I+++KPQTTR+RI I + Q+I DTPGI + K
Sbjct: 25 SVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEERGQVIFLDTPGIHKPK- 83
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDHKDKLPILLVLN 230
H L M+ + + D I+ +VD E I +L++ K P +L LN
Sbjct: 84 HKLGEFMVGTAKESMREVDVILYVVDLSADFGPGEEYIIAMLKQ------TKTPCVLALN 137
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K DL+ ++ +K++ + + D ++P+SAK G +++ + I +L GP YYP+D V
Sbjct: 138 KVDLLNKEQLMRKVQQFSQMADFKAIVPISAKTGENTDELLNVIFNQLSSGPMYYPEDEV 197
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++ PERF + E++REK+ +E+P++ V + + + T ++ +VVE+ SQK I
Sbjct: 198 TDQPERFIMAELVREKVLQLTHDEIPHSIAVVIEEVQEKKTLVK-VRALVVVERESQKGI 256
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+IG GGK LK + AR DIE L V+LE+ VKVK++WR L++YGYG
Sbjct: 257 IIGSGGKQLKEIGRLARQDIEALLGSPVFLELWVKVKKDWRNRLDSLRNYGYG 309
>gi|309789730|ref|ZP_07684310.1| GTP-binding protein Era [Oscillochloris trichoides DG-6]
gi|308228216|gb|EFO81864.1| GTP-binding protein Era [Oscillochloris trichoides DG6]
Length = 466
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 171/288 (59%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N ++GQK++IV+ + QTTR + GI S P+ Q++ DTPGI +
Sbjct: 178 ALVGKPNVGKSTLLNTLLGQKVTIVSPRAQTTRVPVRGILSRPDAQVVFIDTPGI-HQPS 236
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M++ NAD I +VD + P ++D + E V + + LL+LNK D
Sbjct: 237 HKLGKFMVELAERTLPNADVICFMVDISQPPSQLDRSIAEQV--QRARAHKLLLLNKVD- 293
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P LE Y D + +SA+ G G+ + D I+ +LP G YP + V++
Sbjct: 294 IPPRRGTTYLEEYRSLGTWDMEMAISAQRGQGLSSLLDEIVARLPNGQPLYPNEQVTDQS 353
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E+ E++REK+ + EVP+A V V ++T+ A +I++ I VEK SQK ILIG
Sbjct: 354 EQQLAAELVREKVLYFIQQEVPHAVAVEVDEWETKEQAI-YIRMTINVEKESQKGILIGA 412
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + +AAR DIE + KKV+LE+ VKV+ENWR D G + GY
Sbjct: 413 GGAMLKRIGSAARRDIERMVDKKVFLELWVKVRENWRDDLGAMGWLGY 460
>gi|342218410|ref|ZP_08711024.1| ribosome biogenesis GTPase Era [Megasphaera sp. UPII 135-E]
gi|341589822|gb|EGS33084.1| ribosome biogenesis GTPase Era [Megasphaera sp. UPII 135-E]
Length = 299
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 168/288 (58%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +I +K++IV++K QTTR+RIL I + QMI DTPGI + K
Sbjct: 12 AVIGRPNVGKSTLINHIIKEKVTIVSDKAQTTRNRILCIHTDENSQMIFLDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M + + + ++ LV D + E + + +P+ L++NK DL
Sbjct: 71 HKLGEFMDDAAYQSLKDIEAVLFLVAGTDKKGPGDMFISEKLKNCT--VPVFLLINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + + Y + ++IP+SAK G V+ + D + LP GP Y+P D++++ P
Sbjct: 129 LTKEQVLQAIMSYRELYPFAQIIPISAKRGENVDVVLDELKQILPEGPKYFPDDMITDQP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER V EI+REK+ + E+P+A V V KTR K +I+ I VE+NSQK I+IGK
Sbjct: 189 ERLLVAEIVREKLLLVMNEEIPHAIAVYVEEMKTRSKNKVYIRTNIYVERNSQKRIVIGK 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L VYL+I VK+K +WR L+ GY
Sbjct: 249 NGSVLKEVGALARQDIETLLGSSVYLDIWVKIKADWRNKVAALRELGY 296
>gi|322372543|ref|ZP_08047079.1| GTP-binding protein Era [Streptococcus sp. C150]
gi|321277585|gb|EFX54654.1| GTP-binding protein Era [Streptococcus sp. C150]
Length = 299
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 183/290 (63%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|417850220|ref|ZP_12496134.1| GTP-binding protein Era [Streptococcus mitis SK1080]
gi|339455063|gb|EGP67674.1| GTP-binding protein Era [Streptococcus mitis SK1080]
Length = 299
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHICATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSIARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|312868217|ref|ZP_07728417.1| ribosome biogenesis GTPase Era [Streptococcus parasanguinis F0405]
gi|322389989|ref|ZP_08063528.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 903]
gi|387879990|ref|YP_006310293.1| Era-like GTP-binding protein [Streptococcus parasanguinis FW213]
gi|419799282|ref|ZP_14324640.1| GTP-binding protein Era [Streptococcus parasanguinis F0449]
gi|311095962|gb|EFQ54206.1| ribosome biogenesis GTPase Era [Streptococcus parasanguinis F0405]
gi|321143302|gb|EFX38741.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 903]
gi|385698363|gb|EIG28730.1| GTP-binding protein Era [Streptococcus parasanguinis F0449]
gi|386793440|gb|AFJ26475.1| Era-like GTP-binding protein [Streptococcus parasanguinis FW213]
Length = 299
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|53804478|ref|YP_113919.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath]
gi|53758239|gb|AAU92530.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath]
Length = 293
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 175/291 (60%), Gaps = 7/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSIV+ +PQTTRHRILGI + Q+I DTPGI
Sbjct: 7 ALVGRPNVGKSTLLNHLLGQKLSIVSRRPQTTRHRILGIKTDGRGQVIYVDTPGIHGGAR 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVD-ACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
++ + + S+ + D I+ LVD A P+ DE++ + + KLP++LV+NK D
Sbjct: 67 RAMNRYLNRTAISSLLGVDVILWLVDRAGWLPD--DELVMARI--KEAKLPVILVINKVD 122
Query: 234 LIKPGEIAKKLEWYEKFTDV-DEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
I+ + T + E++P+SA G + + + +L LP G YP+D +S+
Sbjct: 123 RIEGKDTLLPFLAEANATGLFSEIVPISALKGINLAVLEERVLALLPEGEPIYPEDQISD 182
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFFV EIIREK+F + EVP+A V + Y+ PT I I VE+ QK I+I
Sbjct: 183 RPERFFVAEIIREKLFNRLTQEVPHALTVQIEQYRESPTLVR-IHAVIWVEREGQKAIVI 241
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
GKGG+ LK + A+R ++E L+++VYLE+ KVK W +E L+ GY
Sbjct: 242 GKGGEVLKRVGEASRRELERMLERRVYLELWTKVKHGWSDNERALQGLGYA 292
>gi|270292907|ref|ZP_06199118.1| GTP-binding protein Era [Streptococcus sp. M143]
gi|270278886|gb|EFA24732.1| GTP-binding protein Era [Streptococcus sp. M143]
Length = 299
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGTMLKKIGSLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|410637344|ref|ZP_11347924.1| GTP-binding protein Era [Glaciecola lipolytica E3]
gi|410142967|dbj|GAC15129.1| GTP-binding protein Era [Glaciecola lipolytica E3]
Length = 302
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 177/299 (59%), Gaps = 4/299 (1%)
Query: 106 DYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
D ++ +++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+GI + +Q I D
Sbjct: 3 DTITYCGMVAIVGRPNVGKSTLLNKLLGQKVSITSRKPQTTRHRIMGIDTEVHHQAIFVD 62
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPG+ ++ ++ +M + S+ ++ LV+ K E D+++ V + LP
Sbjct: 63 TPGLHVEEKRAINRLMNRAASSSLAEVGLVLFLVEGTKWTED-DQMVLNKV--KQSGLPC 119
Query: 226 LLVLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
L++NK D +K ++ ++W ++ D ++++P+SAK G VE++R+ + LP Y
Sbjct: 120 WLLINKSDNVKDKNDLMTHMQWLQEQHDFEKIMPISAKLGRNVEELREMVHRTLPESEFY 179
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 344
+P+D +++ RF EI+REK+ +E+PY+ V + + I I+VE+
Sbjct: 180 FPEDYITDRSSRFMAAEIVREKLMRFTGDELPYSVTVEIEQFLLADNGVYRINGLILVER 239
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+QK ++IGKGG+ LK + AR D+E+ KV+LE+ VKVK W DE L+ GYG
Sbjct: 240 ETQKRMVIGKGGQRLKTIGAEARKDMENLFDNKVFLELWVKVKSGWADDERALRSLGYG 298
>gi|328957481|ref|YP_004374867.1| GTP-binding protein Era [Carnobacterium sp. 17-4]
gi|328673805|gb|AEB29851.1| GTP-binding protein Era [Carnobacterium sp. 17-4]
Length = 302
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPGI + K
Sbjct: 13 SIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTTPESQIVFIDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + SA D I+ +V+ + D + E + K P+ LVLNK D
Sbjct: 72 HRLGDFMVNSAFSAFREVDVILFMVNITEKRGPGDNFIMEKLKTVKS--PVFLVLNKIDK 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ +E Y D +VIP+SA G+ V+ + + I LP GP +YP+D V++HP
Sbjct: 130 IHPDQLLPIIEDYRSLVDFAQVIPISASEGNNVDTLLEEITKYLPTGPQFYPEDQVTDHP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F V E+IREK+ R EVP++ V V S + K + I+VE++SQK I+IGK
Sbjct: 190 EYFIVSELIREKVLELTREEVPHSVAVVVESMQRNELGKVQVHAAIIVERSSQKGIIIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L K+YL++ VKV+++WR + L+ YGY
Sbjct: 250 GGKMLKDIGIRARRDIEVLLGDKIYLDLWVKVQKDWRDRQINLQDYGY 297
>gi|450097590|ref|ZP_21857544.1| GTP-binding protein Era [Streptococcus mutans SF1]
gi|449222554|gb|EMC22278.1| GTP-binding protein Era [Streptococcus mutans SF1]
Length = 299
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVSVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|293365236|ref|ZP_06611953.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037]
gi|307703775|ref|ZP_07640716.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037]
gi|291316686|gb|EFE57122.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037]
gi|307622610|gb|EFO01606.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIDRL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|402302484|ref|ZP_10821595.1| GTP-binding protein Era [Selenomonas sp. FOBRC9]
gi|400380302|gb|EJP33121.1| GTP-binding protein Era [Selenomonas sp. FOBRC9]
Length = 298
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 172/297 (57%), Gaps = 17/297 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTPG+ + K
Sbjct: 10 AVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTQEDAQVIFLDTPGVHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L S M K A + V+V A E++ G G+ K ++P+LL
Sbjct: 69 HKLGSHMAKATEGA---LHGVDVVVFVVDATEKM------GAGEQYILKQLEKVRVPVLL 119
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK DL++ E + Y K D ++P+SA+ G + + D I LP GP YYP+
Sbjct: 120 AVNKIDLLRREETLPIIASYAKTYDFAGIVPISARAGENLAGLLDEIKKHLPEGPRYYPE 179
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D+V++ PER + E++REK R+E+P+A V++ TR +++ I VE+ SQ
Sbjct: 180 DMVTDQPERLIIAELVREKALELTRDEIPHAVAVDIEEITTRAKGDVYVRAVIYVERESQ 239
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
K I+IG G L+ + AR DIE L KVYL++ VK + +WR E L+ +G G
Sbjct: 240 KGIVIGARGALLRTIGARARADIETLLGAKVYLDLWVKTRRDWRNRESALREFGLSG 296
>gi|307564581|ref|ZP_07627121.1| GTP-binding protein Era [Prevotella amnii CRIS 21A-A]
gi|307346739|gb|EFN92036.1| GTP-binding protein Era [Prevotella amnii CRIS 21A-A]
Length = 293
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 176/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDNAQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM++ SA +AD ++ + D + P++ + L++ K ++P++L++NK D
Sbjct: 68 KM-QEMMLQFSESALADADILLYVTDVVEDPKKNIDFLDKV---SKMQIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + E++P+SA+ G + + I LP PA++ KD +++ P
Sbjct: 124 SDQQRLVMLVDIWHSLLPNAEILPISAQNKFGTDILLKRIYELLPESPAFFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y EVPY+ +V V S+K + I I VE+NSQK I+IG
Sbjct: 184 AKFFVSEIIREKILRYYDKEVPYSVEVVVDSFKEN-EQQIHIGAIIYVERNSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KK+++EI VKV ++WR + L ++GY
Sbjct: 243 QGHALKKVSTEARKSLERFFNKKIFMEIFVKVDKDWRNSQKELNNFGYN 291
>gi|417915206|ref|ZP_12558827.1| ribosome biogenesis GTPase Era [Streptococcus mitis bv. 2 str.
SK95]
gi|342835320|gb|EGU69571.1| ribosome biogenesis GTPase Era [Streptococcus mitis bv. 2 str.
SK95]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|304382195|ref|ZP_07364703.1| GTP-binding protein Era [Prevotella marshii DSM 16973]
gi|304336660|gb|EFM02888.1| GTP-binding protein Era [Prevotella marshii DSM 16973]
Length = 303
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 174/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 18 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPGVLQPNY 77
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM + SA +AD ++ + D + PE+ + L++ K P+LL++NK D
Sbjct: 78 KLQESMRAFS-ESALTDADVLLYVTDVVEKPEKNMDFLQKV---QKISTPVLLLINKIDR 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + + E++P+SAK G++ + I LP P Y+ K+ ++ P
Sbjct: 134 SDQQTLGNIVERWHELLPNAEILPISAKNQFGIDILLKRIKDLLPDAPPYFGKEQWTDKP 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V S+K K I V I VE++SQK I+IG
Sbjct: 194 ARFFVSEIIREKILLYYDKEIPYSVEVRVESFK-EDAQKIVIHVVIYVERDSQKGIIIGH 252
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F K +YLE VKV ++WR + L +GY
Sbjct: 253 QGIALKKVSTEARKALERFFGKSIYLETYVKVDKDWRSSQRELNSFGYN 301
>gi|300860627|ref|ZP_07106714.1| GTP-binding protein Era [Enterococcus faecalis TUSoD Ef11]
gi|300849666|gb|EFK77416.1| GTP-binding protein Era [Enterococcus faecalis TUSoD Ef11]
Length = 300
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 188/289 (65%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPGI + K
Sbjct: 11 AIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+++ +A D + +V A + + D + E + ++ P+ L++NK D
Sbjct: 70 HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDGFIIERLKNNNS--PVYLIINKIDK 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D +++HP
Sbjct: 128 VHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVV-SYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
E F V E+IREK+ + R+E+P++ V VV S K K +Q I+VE++SQK I+IG
Sbjct: 188 EYFIVSELIREKVLLLTRDEIPHSVAV-VVDSMKRDENDKVHVQATIIVERDSQKGIIIG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGGK LK + T AR DIE L KVYLE+ VKV+++WR + L+ +GY
Sbjct: 247 KGGKMLKQIGTKARQDIEYLLDDKVYLELWVKVQKDWRDKKIYLQDFGY 295
>gi|450119886|ref|ZP_21865345.1| GTP-binding protein Era [Streptococcus mutans ST6]
gi|449230884|gb|EMC30126.1| GTP-binding protein Era [Streptococcus mutans ST6]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V V S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVVDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|450114913|ref|ZP_21863604.1| GTP-binding protein Era [Streptococcus mutans ST1]
gi|449228594|gb|EMC27954.1| GTP-binding protein Era [Streptococcus mutans ST1]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
LD M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 -ALDDFMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETNKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+ G LK + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 RQGAMLKKIGQLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|78187585|ref|YP_375628.1| GTP-binding protein Era [Chlorobium luteolum DSM 273]
gi|78167487|gb|ABB24585.1| GTP-binding protein Era [Chlorobium luteolum DSM 273]
Length = 305
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 175/295 (59%), Gaps = 8/295 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G PN GKSTL N ++ KLSIVT KPQTTR RI GI + Q++ DTPGI+E
Sbjct: 12 SIIGPPNAGKSTLMNALLDCKLSIVTPKPQTTRKRITGIYHDKQMQVVFLDTPGIMEPMQ 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL---PILLVLNK 231
+ ++M++ R +AD I+ ++ K D + + K PI+ V NK
Sbjct: 72 KLHEAMLLAT-RDTLRDADVIIAMLPFRKKEGPFDRDFAATLQNDWLKTSGKPIVAVFNK 130
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
DL+ E ++ + + + V+ +SA G + ++ + + LP+ YP+D +S
Sbjct: 131 SDLVTLKEQSEAEAFIREAWNPAAVLSISALKGVNLPELLEALRPFLPMNQPLYPEDALS 190
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIVVEKNSQ 347
PERFFV EIIREKIF+ Y EVPY+ +V V ++ + P+ KD I+ ++VE+++Q
Sbjct: 191 TAPERFFVSEIIREKIFLLYGREVPYSAEVVVDEFREQHENDPSRKDLIRCSVIVERDTQ 250
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIG G+ALK L AAR +IE+ + + V+LE+ +KV+ +WR+ LLK YGY
Sbjct: 251 KQILIGHKGQALKKLGQAARTEIEELIGRPVFLELFIKVRPDWRKKHTLLKSYGY 305
>gi|417934378|ref|ZP_12577698.1| GTP-binding protein Era [Streptococcus mitis bv. 2 str. F0392]
gi|340770948|gb|EGR93463.1| GTP-binding protein Era [Streptococcus mitis bv. 2 str. F0392]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFCNQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|421767231|ref|ZP_16203988.1| GTP-binding protein Era [Lactococcus garvieae DCC43]
gi|407624276|gb|EKF51046.1| GTP-binding protein Era [Lactococcus garvieae DCC43]
Length = 303
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 176/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + + Q+I DTPGI K
Sbjct: 12 AILGRPNVGKSTFLNHVMGQKIAIMSDKPQTTRNKIQGIYTTDKEQIIFIDTPGI-HKPH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S D ++ +V A + + ++ E + +P++LV+NK D
Sbjct: 71 NALGDFMVQSAYSTLRECDMVLFMVAADEPRSTGENMIIERL--KTADVPVILVVNKIDK 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + + + Y + EV+P+SA G+ E + + + +KL GP Y+P+D+V++HP
Sbjct: 129 VHPDALFETVSDYTSQMEFAEVVPISALQGNNTERLLETLSSKLEEGPQYFPEDMVTDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI + R EVP++ V S K T K I I+VE+ SQK I++G
Sbjct: 189 ERFLVSEMIREKILLLTREEVPHSIAVTTDSMKRDVETGKIHIMATIIVERKSQKGIILG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG ++ + AR DIE L KVYLE VK+K +WR + L +GY
Sbjct: 249 KGGDMIRKIGKLARRDIELMLGDKVYLETWVKIKNDWRDRKMDLSDFGY 297
>gi|290580024|ref|YP_003484416.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|449935824|ref|ZP_21803639.1| GTP-binding protein Era [Streptococcus mutans 2ST1]
gi|449941853|ref|ZP_21805717.1| GTP-binding protein Era [Streptococcus mutans 11A1]
gi|449972123|ref|ZP_21814668.1| GTP-binding protein Era [Streptococcus mutans 2VS1]
gi|450030141|ref|ZP_21833083.1| GTP-binding protein Era [Streptococcus mutans G123]
gi|450036165|ref|ZP_21835382.1| GTP-binding protein Era [Streptococcus mutans M21]
gi|450056412|ref|ZP_21842029.1| GTP-binding protein Era [Streptococcus mutans NLML4]
gi|450091419|ref|ZP_21855485.1| GTP-binding protein Era [Streptococcus mutans W6]
gi|450111535|ref|ZP_21862762.1| GTP-binding protein Era [Streptococcus mutans SM6]
gi|450144582|ref|ZP_21874103.1| GTP-binding protein Era [Streptococcus mutans 1ID3]
gi|450150647|ref|ZP_21876682.1| GTP-binding protein Era [Streptococcus mutans 14D]
gi|450154442|ref|ZP_21877730.1| GTP-binding protein Era [Streptococcus mutans 21]
gi|450160523|ref|ZP_21880068.1| GTP-binding protein Era [Streptococcus mutans 66-2A]
gi|450164799|ref|ZP_21881521.1| GTP-binding protein Era [Streptococcus mutans B]
gi|254996923|dbj|BAH87524.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|449150425|gb|EMB54190.1| GTP-binding protein Era [Streptococcus mutans 1ID3]
gi|449151631|gb|EMB55359.1| GTP-binding protein Era [Streptococcus mutans 11A1]
gi|449166174|gb|EMB69129.1| GTP-binding protein Era [Streptococcus mutans 2ST1]
gi|449171177|gb|EMB73852.1| GTP-binding protein Era [Streptococcus mutans 2VS1]
gi|449193270|gb|EMB94659.1| GTP-binding protein Era [Streptococcus mutans G123]
gi|449194551|gb|EMB95905.1| GTP-binding protein Era [Streptococcus mutans M21]
gi|449206782|gb|EMC07475.1| GTP-binding protein Era [Streptococcus mutans NLML4]
gi|449219375|gb|EMC19344.1| GTP-binding protein Era [Streptococcus mutans W6]
gi|449223782|gb|EMC23453.1| GTP-binding protein Era [Streptococcus mutans SM6]
gi|449233276|gb|EMC32353.1| GTP-binding protein Era [Streptococcus mutans 14D]
gi|449237814|gb|EMC36618.1| GTP-binding protein Era [Streptococcus mutans 21]
gi|449239898|gb|EMC38598.1| GTP-binding protein Era [Streptococcus mutans 66-2A]
gi|449241339|gb|EMC39972.1| GTP-binding protein Era [Streptococcus mutans B]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V V S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVVDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|450170125|ref|ZP_21883363.1| GTP-binding protein Era [Streptococcus mutans SM4]
gi|449246219|gb|EMC44530.1| GTP-binding protein Era [Streptococcus mutans SM4]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGY 294
>gi|312143999|ref|YP_003995445.1| GTP-binding protein Era [Halanaerobium hydrogeniformans]
gi|311904650|gb|ADQ15091.1| GTP-binding protein Era [Halanaerobium hydrogeniformans]
Length = 293
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 175/288 (60%), Gaps = 4/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N ++G+K++I++ +PQTTR+ I I + + Q+I DTPGI + +
Sbjct: 9 TVIGRPNVGKSTLVNNLVGEKINIISPRPQTTRNSIKAIYTEEKGQIIFIDTPGIHQAR- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ LD M++ S+ D I+ ++DA + D+++ + + K I+ V+NK D
Sbjct: 68 NKLDKFMLEEAYSSLDGIDIIIFILDASTYWGKNDQMIYDQIKSSKKN--IIYVMNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I ++ + + Y + +EVIP+SA ++ + + I + LP GP YYP+D++++
Sbjct: 126 ISNKDLLLRQKKYSQKVG-EEVIPISALNNKNIDTLLEEIFSYLPEGPQYYPEDMITDQI 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF E+IREKIF R EVPY V V K R +I+ I VEK S K I+IGK
Sbjct: 185 ERFVFAELIREKIFYLTREEVPYGAAVLVEEVKERDNEDYYIRANIYVEKKSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK +K + AR +IED +Q KVYL++ VKV +NWR + L+K GY
Sbjct: 245 NGKMIKRIGKEARKEIEDLMQTKVYLDLWVKVLKNWRDKDNLMKRMGY 292
>gi|449991694|ref|ZP_21822015.1| GTP-binding protein Era [Streptococcus mutans NVAB]
gi|449180801|gb|EMB82939.1| GTP-binding protein Era [Streptococcus mutans NVAB]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E+IP+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIIPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KRGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|54310186|ref|YP_131206.1| GTP-binding protein Era [Photobacterium profundum SS9]
gi|46914627|emb|CAG21404.1| putative GTP-binding protein Era [Photobacterium profundum SS9]
Length = 301
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ + DTPG+
Sbjct: 6 HCGFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVFIDTPGL 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
++ ++ +M + S+ + + ++ LVD + +L + K +LP +L++
Sbjct: 66 HIEEKRTINRLMNRAASSSLTDVELVLFLVDGTMWTADDEMVLNKL---KKSELPTVLLI 122
Query: 230 NKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D +K G++ L+ K D +V+P+SAK G V+ + + +P G Y+P+D
Sbjct: 123 NKVDNVKEKGDLFPHLDALSKKMDFVDVVPISAKKGTNVDAVEKIVRAHIPEGEYYFPED 182
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 347
V++ +RF EIIREK+ E+PY+ V + + P F I I VE+ Q
Sbjct: 183 YVTDRSQRFMASEIIREKLMRFLGEELPYSVTVEIERFDYNPKMDGFDINGLIFVERKGQ 242
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ++IGK G+ +K++ AR+D+ED +KVYLE+ VKVK W DE L+ GY
Sbjct: 243 KKMVIGKNGEKMKVIGREARIDMEDLFGRKVYLELWVKVKSGWADDERALRSLGY 297
>gi|414155973|ref|ZP_11412282.1| GTPase Era [Streptococcus sp. F0442]
gi|410872182|gb|EKS20126.1| GTPase Era [Streptococcus sp. F0442]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF + E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLISEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|24379997|ref|NP_721952.1| GTPase Era [Streptococcus mutans UA159]
gi|449865327|ref|ZP_21778917.1| GTP-binding protein Era [Streptococcus mutans U2B]
gi|449871751|ref|ZP_21781252.1| GTP-binding protein Era [Streptococcus mutans 8ID3]
gi|449894274|ref|ZP_21789150.1| GTP-binding protein Era [Streptococcus mutans SF12]
gi|449916542|ref|ZP_21796915.1| GTP-binding protein Era [Streptococcus mutans 15JP3]
gi|449975748|ref|ZP_21815964.1| GTP-binding protein Era [Streptococcus mutans 11VS1]
gi|450010786|ref|ZP_21828794.1| GTP-binding protein Era [Streptococcus mutans A19]
gi|450023899|ref|ZP_21830916.1| GTP-binding protein Era [Streptococcus mutans U138]
gi|450050373|ref|ZP_21840241.1| GTP-binding protein Era [Streptococcus mutans NFSM1]
gi|450071124|ref|ZP_21847979.1| GTP-binding protein Era [Streptococcus mutans M2A]
gi|450076164|ref|ZP_21849729.1| GTP-binding protein Era [Streptococcus mutans N3209]
gi|450083573|ref|ZP_21852989.1| GTP-binding protein Era [Streptococcus mutans N66]
gi|26006953|sp|P37214.2|ERA_STRMU RecName: Full=GTPase Era; AltName: Full=SGP
gi|24377985|gb|AAN59258.1|AE014993_2 GTP-binding protein; Era-like protein [Streptococcus mutans UA159]
gi|449155089|gb|EMB58621.1| GTP-binding protein Era [Streptococcus mutans 8ID3]
gi|449155140|gb|EMB58670.1| GTP-binding protein Era [Streptococcus mutans 15JP3]
gi|449176457|gb|EMB78803.1| GTP-binding protein Era [Streptococcus mutans 11VS1]
gi|449189985|gb|EMB91598.1| GTP-binding protein Era [Streptococcus mutans A19]
gi|449192706|gb|EMB94114.1| GTP-binding protein Era [Streptococcus mutans U138]
gi|449202726|gb|EMC03623.1| GTP-binding protein Era [Streptococcus mutans NFSM1]
gi|449212749|gb|EMC13101.1| GTP-binding protein Era [Streptococcus mutans M2A]
gi|449212961|gb|EMC13309.1| GTP-binding protein Era [Streptococcus mutans N3209]
gi|449212977|gb|EMC13324.1| GTP-binding protein Era [Streptococcus mutans N66]
gi|449255401|gb|EMC53256.1| GTP-binding protein Era [Streptococcus mutans SF12]
gi|449264314|gb|EMC61659.1| GTP-binding protein Era [Streptococcus mutans U2B]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|163791428|ref|ZP_02185837.1| GTP-binding protein Era [Carnobacterium sp. AT7]
gi|159873292|gb|EDP67387.1| GTP-binding protein Era [Carnobacterium sp. AT7]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPGI + K
Sbjct: 10 SIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTTPESQIVFIDTPGIHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + SA D I+ +V+ + D + E + K P+ LVLNK D
Sbjct: 69 HRLGDFMVDSAFSAFREVDVILFMVNIAEKRGPGDNFIMERLKTVKS--PVFLVLNKIDK 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ +E Y D ++VIP+SA G+ VE + + LP GP +YP D V++HP
Sbjct: 127 IHPDQLLPIIEDYRSLVDFEQVIPISAADGNNVETLLSEVTKYLPEGPQFYPDDQVTDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F V E+IREK+ R EVP++ V V S + K + I+VE++SQK I+IGK
Sbjct: 187 EYFIVSELIREKVLELTREEVPHSVAVVVESMQRNELGKVQVHAAIIVERSSQKGIIIGK 246
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + AR DIE L K+YL++ VKV+++WR + L+ YGY
Sbjct: 247 GGKMLKDIGIRARRDIEVLLGDKIYLDLWVKVQKDWRDRQTNLQDYGY 294
>gi|449883263|ref|ZP_21785040.1| GTP-binding protein Era [Streptococcus mutans SA38]
gi|449250128|gb|EMC48207.1| GTP-binding protein Era [Streptococcus mutans SA38]
Length = 299
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|450132950|ref|ZP_21870395.1| GTP-binding protein Era [Streptococcus mutans NLML8]
gi|449152199|gb|EMB55911.1| GTP-binding protein Era [Streptococcus mutans NLML8]
Length = 299
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLIDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|332652574|ref|ZP_08418319.1| GTP-binding protein Era [Ruminococcaceae bacterium D16]
gi|332517720|gb|EGJ47323.1| GTP-binding protein Era [Ruminococcaceae bacterium D16]
Length = 298
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 178/294 (60%), Gaps = 14/294 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++ G+PNVGKSTL N ++G+K++IVTNKPQTTR+RI I + E Q + DTPG+ + +
Sbjct: 10 TLCGRPNVGKSTLTNALVGEKVAIVTNKPQTTRNRITAILNRGESQFVFVDTPGLHKART 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK---APER--IDEILEEGVGDHKDKLPILLVL 229
+ D M+ V+ + + D I++LV+ APE+ ID I G P +LV+
Sbjct: 70 RLGD-YMVNVVKESVADVDGIMLLVEPIPNIGAPEQQLIDRIKTLGC-------PSVLVI 121
Query: 230 NKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D ++ E + + ++ Y + D V+P+SAK G GV+++ + + LP GP +P+
Sbjct: 122 NKVDTLEQKEKLLEVIQVYTQAHDFTAVVPISAKTGEGVDELLNVLEGFLPNGPQLFPEG 181
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+VS+ PER + EI+REK+ + E+P+ V + + R I I EKNS K
Sbjct: 182 MVSDQPERQMMAEILREKLLLCLDKEIPHGTAVEITKFSERDDEVIEIDATIYCEKNSHK 241
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGG LK +++ AR D+E F+ KVYL+ VKVKENWR + L+ ++GY
Sbjct: 242 GIIIGKGGSMLKKVSSLARQDMERFMGTKVYLQTWVKVKENWRDNINLIHNFGY 295
>gi|255320779|ref|ZP_05361954.1| GTP-binding protein Era [Acinetobacter radioresistens SK82]
gi|262379445|ref|ZP_06072601.1| GTP-binding protein Era [Acinetobacter radioresistens SH164]
gi|421465570|ref|ZP_15914257.1| GTP-binding protein Era [Acinetobacter radioresistens WC-A-157]
gi|255302156|gb|EET81398.1| GTP-binding protein Era [Acinetobacter radioresistens SK82]
gi|262298902|gb|EEY86815.1| GTP-binding protein Era [Acinetobacter radioresistens SH164]
gi|400203837|gb|EJO34822.1| GTP-binding protein Era [Acinetobacter radioresistens WC-A-157]
Length = 342
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 190/345 (55%), Gaps = 32/345 (9%)
Query: 86 LSEKPDRNMA-----SPDDYEIEEF----------DYASHPNHKSVLGKPNVGKSTLANQ 130
+S +PD+N +PD+ I++F D+ S +++G+PNVGKSTL N
Sbjct: 1 MSIQPDQNSTDQESNTPDNNLIDQFFSSQGVTIPADFKS--GFVAIVGRPNVGKSTLMNH 58
Query: 131 MIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGI 190
++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA
Sbjct: 59 LLGQKLSITSRKPQTTRHKIIGIDSREKSQAVYVDTPGMHKKEVRAINKMMNRAAHSALR 118
Query: 191 NADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKL-EWYEK 249
+ + ++ +VDA K + D +LE+ ++P++LV+NK D I+ L + K
Sbjct: 119 DVNLVLFVVDAHKWTQNDDLVLEKL---KNAEMPVILVINKIDTIEEKRTLLPLIQERTK 175
Query: 250 FTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFM 309
+ E++PVSA G +E +RD I LP P Y D +++ ERF E+IREKI
Sbjct: 176 LMNFVEIVPVSALRGANLEHLRDTIDKYLPFQPPLYSFDQITDRSERFLASEVIREKIMR 235
Query: 310 QYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVVEKNSQKIILIGKGGKA 358
Q E+PY V + S+KT A + +I I V++ QK I+IG+ G
Sbjct: 236 QLGEELPYDLTVQIESFKTEEPALNEKTGRMKAACTYIDATIFVDRPGQKAIVIGEKGAK 295
Query: 359 LKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
LK + AR+D+E ++K+ L + VKVK W DE LK GY
Sbjct: 296 LKKIGMDARIDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGYS 340
>gi|418027356|ref|ZP_12666015.1| GTP-binding protein era [Streptococcus thermophilus CNCM I-1630]
gi|354692003|gb|EHE91869.1| GTP-binding protein era [Streptococcus thermophilus CNCM I-1630]
Length = 299
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 182/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVVNKIDR 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + K D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDTVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|440780690|ref|ZP_20959161.1| GTPase Era [Clostridium pasteurianum DSM 525]
gi|440221278|gb|ELP60483.1| GTPase Era [Clostridium pasteurianum DSM 525]
Length = 297
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV++KPQTTR+ I I +G + Q+I DTPGI + K
Sbjct: 8 TIIGRPNVGKSTLLNYIMGEKLSIVSSKPQTTRNNIQTILTGKDSQLIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
HML M+K + + D IV + + DE + E + + K +P+ LV+NK D
Sbjct: 67 HMLGEYMVKVATDSFKDVDLIVFVTTPDVTMGKGDEFILEQLKEVK--IPVFLVVNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+A+ L+ Y + + E+IP+SA G V+ + + ++ +P GP YYP+D++++
Sbjct: 125 TTKERVAETLKNYSEKFNFKEIIPISAAKGKNVDKLLEIMVEAMPEGPQYYPEDMLTDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EIIREK EVP+ V ++S K +P + I+ + EKNS K I+IGK
Sbjct: 185 ERFVVSEIIREKALRLLSEEVPHGIAVEIMSMKQKPNGRYNIEATLFCEKNSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + +R DI FL +V L+I +KVK+ WR + LL GY
Sbjct: 245 EGNMLKKITKYSREDIAKFLNIRVDLKIWIKVKKEWRDNPFLLNELGY 292
>gi|402815807|ref|ZP_10865399.1| GTPase Era [Paenibacillus alvei DSM 29]
gi|402506847|gb|EJW17370.1| GTPase Era [Paenibacillus alvei DSM 29]
Length = 306
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + Q++ DTPGI ++K
Sbjct: 19 AIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTDHSQIVFLDTPGIHKRKS 78
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+ D M NV +N + ++ LVD D+ + E + K + P++LV+NK D
Sbjct: 79 KLGD--YMNNVALNTLNEVEAVLFLVDVSAGLGGGDKYVIEQL--KKVRTPVILVMNKID 134
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P + + Y + + E++P+SA G V + D + LP GP YYP D +++H
Sbjct: 135 QVHPEALPPLIAEYNELHEFAEIVPISALNGSNVNRLLDVLGGYLPEGPQYYPDDQITDH 194
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE+F V E+IREKI R E+P++ V + + + +I I VE++SQK I+IG
Sbjct: 195 PEQFVVAELIREKILHLTREEIPHSIAVTIEDMRVQENGVVYISAVIFVERDSQKGIVIG 254
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE+ L K ++E+ VKVK++WR + +L+ G+
Sbjct: 255 KQGALLKEIGKLARQDIENLLGSKTFMELWVKVKKDWRNQDRILRDLGF 303
>gi|333394977|ref|ZP_08476796.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|420144895|ref|ZP_14652374.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
gi|398403452|gb|EJN56694.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
Length = 301
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 181/302 (59%), Gaps = 17/302 (5%)
Query: 108 ASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
A H +++G+PNVGKST N+++GQK++I++NK QTTR++I GI + Q++ DTP
Sbjct: 5 AFHSGFVAIVGRPNVGKSTFLNRVVGQKVAIMSNKAQTTRNKIQGIYTTEHSQIVFIDTP 64
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HK 220
GI K + LD MM + SA D ++ +V A +R+ G GD K
Sbjct: 65 GI-HKPQNKLDEFMMNSATSALNEVDAVLFMV---SAKDRM------GAGDTFIIDQLKK 114
Query: 221 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
K P+ L++NK D + P ++A +E Y+ D +V P+SA G+ V+++ + LP
Sbjct: 115 VKQPVYLIVNKIDTVHPNDLAPFVEQYQAELDFAQVFPISALQGNNVDELLATLNQNLPE 174
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP YYP D +++HPE F V E+IREKI R+EVP++ VNV + K I+ I
Sbjct: 175 GPQYYPDDQITDHPEYFVVSELIREKILELTRDEVPHSVAVNVERMRRNDQDKLKIEATI 234
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
+VE++ QK I+IGKGGK LK + T AR DIE L KVYL++ VK+ +NWR ++ L
Sbjct: 235 IVERDGQKGIIIGKGGKMLKEIGTRARRDIEHLLGDKVYLQLWVKIDKNWRDNQRYLNEL 294
Query: 401 GY 402
GY
Sbjct: 295 GY 296
>gi|450175194|ref|ZP_21885022.1| GTP-binding protein Era [Streptococcus mutans SM1]
gi|449247267|gb|EMC45552.1| GTP-binding protein Era [Streptococcus mutans SM1]
Length = 299
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLADHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V V S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVVDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|299141483|ref|ZP_07034619.1| GTP-binding protein Era [Prevotella oris C735]
gi|298576819|gb|EFI48689.1| GTP-binding protein Era [Prevotella oris C735]
Length = 293
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 178/292 (60%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ+IG+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLIGERISIATFKAQTTRHRIMGIVNTDDCQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNK--- 231
M MM+ SA +AD ++ + D + PE+ + L++ K K+P+LL++NK
Sbjct: 68 KM-QEMMLAFSESALTDADILLYVTDVVENPEKNMDFLDKV---KKMKIPVLLLVNKIDE 123
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D G+I K W+ + E++P+SAK GV+ + I LP PAY+ KD ++
Sbjct: 124 SDQKTLGDIVTK--WHSLLPNA-EILPLSAKNKFGVDMLLKRIKELLPESPAYFDKDQLT 180
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ P +FFV EIIREKI + Y E+PY+ +V V +K + I I VE++SQK I+
Sbjct: 181 DKPAKFFVSEIIREKILLYYDKEIPYSVEVRVERFKENDSVIH-INAVIYVERDSQKGII 239
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
IG G ALK +++ AR +E F KK++LE VKV ++WR + L +GY
Sbjct: 240 IGHQGIALKKVSSEARKALEKFFGKKIFLETFVKVDKDWRSSQRELDSFGYN 291
>gi|449979699|ref|ZP_21816846.1| GTP-binding protein Era [Streptococcus mutans 5SM3]
gi|450001514|ref|ZP_21825696.1| GTP-binding protein Era [Streptococcus mutans N29]
gi|450005302|ref|ZP_21826603.1| GTP-binding protein Era [Streptococcus mutans NMT4863]
gi|449177625|gb|EMB79917.1| GTP-binding protein Era [Streptococcus mutans 5SM3]
gi|449184479|gb|EMB86423.1| GTP-binding protein Era [Streptococcus mutans N29]
gi|449188720|gb|EMB90417.1| GTP-binding protein Era [Streptococcus mutans NMT4863]
Length = 299
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVSADEKRGKGDNMIIERL--KVAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|189425186|ref|YP_001952363.1| GTP-binding protein Era [Geobacter lovleyi SZ]
gi|259645944|sp|B3E422.1|ERA_GEOLS RecName: Full=GTPase Era
gi|189421445|gb|ACD95843.1| GTP-binding protein Era [Geobacter lovleyi SZ]
Length = 296
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 171/289 (59%), Gaps = 6/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++G+K+ V++KPQTTR+ I GI S Q++ DTPGI +
Sbjct: 12 SIIGRPNVGKSTLLNRILGEKIVAVSDKPQTTRNVIRGILSDETSQIVFVDTPGIHTART 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ M+ + D ++++VDA ++I+E + + K PI LVLNK D
Sbjct: 72 R-INRAMVDAAMTVVTGIDLMLLVVDAT---QKIEETFIKDIC-SKAGAPIYLVLNKIDQ 126
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P E + +E Y + D E+IP+SA+ G +E + D + LP G A +P DI+++
Sbjct: 127 VTPKEKLFTVIEGYTRLYDFPEIIPISAQSGSNIERLVDLVREHLPEGEALFPDDILTDL 186
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE+F V E+IREK+F EVPY V V ++ R I I+VE++S K I+IG
Sbjct: 187 PEKFIVAELIREKVFRLTNREVPYGTAVVVEAFAERENGLVAINATIMVERDSHKGIIIG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L KVYLE+ V+V+E W + +L+ GY
Sbjct: 247 KKGVMLKKIGEQARRDIERLLGTKVYLELFVQVQERWTERTAMLRELGY 295
>gi|406576440|ref|ZP_11052069.1| GTPase Era [Streptococcus sp. GMD6S]
gi|404461447|gb|EKA07378.1| GTPase Era [Streptococcus sp. GMD6S]
Length = 299
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P + +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSNQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARRDIELMLGDKVFLETWVKVKKNWRDRKLDLADFGY 294
>gi|55820698|ref|YP_139140.1| GTP-binding protein Era [Streptococcus thermophilus LMG 18311]
gi|386344312|ref|YP_006040476.1| GTP-binding protein [Streptococcus thermophilus JIM 8232]
gi|445374328|ref|ZP_21426376.1| GTPase Era [Streptococcus thermophilus MTCC 5460]
gi|445388833|ref|ZP_21428091.1| GTPase Era [Streptococcus thermophilus MTCC 5461]
gi|55736683|gb|AAV60325.1| GTP-binding protein [Streptococcus thermophilus LMG 18311]
gi|339277773|emb|CCC19521.1| GTP-binding protein [Streptococcus thermophilus JIM 8232]
gi|444750581|gb|ELW75383.1| GTPase Era [Streptococcus thermophilus MTCC 5461]
gi|444750678|gb|ELW75474.1| GTPase Era [Streptococcus thermophilus MTCC 5460]
Length = 299
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 182/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + K D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDTVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|397650217|ref|YP_006490744.1| GTPase Era [Streptococcus mutans GS-5]
gi|449877300|ref|ZP_21783196.1| GTP-binding protein Era [Streptococcus mutans S1B]
gi|449885634|ref|ZP_21785703.1| GTP-binding protein Era [Streptococcus mutans SA41]
gi|449902407|ref|ZP_21791556.1| GTP-binding protein Era [Streptococcus mutans M230]
gi|449984558|ref|ZP_21819133.1| GTP-binding protein Era [Streptococcus mutans NFSM2]
gi|450039280|ref|ZP_21836159.1| GTP-binding protein Era [Streptococcus mutans T4]
gi|450046315|ref|ZP_21838872.1| GTP-binding protein Era [Streptococcus mutans N34]
gi|450062940|ref|ZP_21844661.1| GTP-binding protein Era [Streptococcus mutans NLML5]
gi|392603786|gb|AFM81950.1| GTPase Era [Streptococcus mutans GS-5]
gi|449180137|gb|EMB82313.1| GTP-binding protein Era [Streptococcus mutans NFSM2]
gi|449199091|gb|EMC00175.1| GTP-binding protein Era [Streptococcus mutans N34]
gi|449200619|gb|EMC01643.1| GTP-binding protein Era [Streptococcus mutans T4]
gi|449205207|gb|EMC05964.1| GTP-binding protein Era [Streptococcus mutans NLML5]
gi|449251048|gb|EMC49079.1| GTP-binding protein Era [Streptococcus mutans S1B]
gi|449255045|gb|EMC52924.1| GTP-binding protein Era [Streptococcus mutans SA41]
gi|449262805|gb|EMC60246.1| GTP-binding protein Era [Streptococcus mutans M230]
Length = 299
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|339443258|ref|YP_004709263.1| GTPase [Clostridium sp. SY8519]
gi|338902659|dbj|BAK48161.1| GTPase [Clostridium sp. SY8519]
Length = 304
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 179/294 (60%), Gaps = 12/294 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY-QMILYDTPGIIEKK 173
+++G+PNVGKSTL N++IGQK++I +NKPQTTR+RI I + E Q+I DTPGI + K
Sbjct: 11 TLIGRPNVGKSTLMNRIIGQKIAITSNKPQTTRNRIQTIYTDKETGQIIFLDTPGIHKAK 70
Query: 174 IHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILEEGVGDHKDKLPILLVLN 230
+ L M+ D I+ LV+ A E+ I+EE K K P++LV+N
Sbjct: 71 -NKLGEYMVHVAEHTLSEVDVILWLVEPSNFIGAGEK--HIIEEL---KKVKTPVILVIN 124
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D +K EI + ++ Y K D E+IP+SA G VED+ I LP GP +Y +D +
Sbjct: 125 KIDTVKKEEILEYIDTYRKVCDFAEIIPLSALKGDNVEDLVQTIFKYLPYGPMFYDEDTI 184
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQK 348
++ PER V E+IREK + EVP+ V V S K RP K+ + +E I+ E++S K
Sbjct: 185 TDQPERQIVAELIREKALRALKEEVPHGIAVAVESMKERPGKKEMVDIEATIICERDSHK 244
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + + AR +IE L KKV L++ VKV+++WR + +K++GY
Sbjct: 245 GIVIGKKGAMLKKIGSLARPEIETMLGKKVNLQLWVKVRKDWRDSDIQMKNFGY 298
>gi|387785695|ref|YP_006250791.1| GTP-binding protein [Streptococcus mutans LJ23]
gi|449910031|ref|ZP_21794494.1| GTP-binding protein Era [Streptococcus mutans OMZ175]
gi|449926838|ref|ZP_21800951.1| GTP-binding protein Era [Streptococcus mutans 4SM1]
gi|450086706|ref|ZP_21853839.1| GTP-binding protein Era [Streptococcus mutans NV1996]
gi|379132096|dbj|BAL68848.1| GTP-binding protein [Streptococcus mutans LJ23]
gi|449160233|gb|EMB63510.1| GTP-binding protein Era [Streptococcus mutans 4SM1]
gi|449219147|gb|EMC19125.1| GTP-binding protein Era [Streptococcus mutans NV1996]
gi|449260443|gb|EMC57943.1| GTP-binding protein Era [Streptococcus mutans OMZ175]
Length = 299
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGY 294
>gi|392376032|ref|YP_003207865.1| GTP-binding protein (era) [Candidatus Methylomirabilis oxyfera]
gi|258593725|emb|CBE70066.1| GTP-binding protein (era) [Candidatus Methylomirabilis oxyfera]
Length = 300
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 176/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SIV+ +PQTTR +I+GI S P Q+I DTPGI +K
Sbjct: 12 AIIGRPNVGKSTLMNRLLGQKVSIVSPRPQTTRTKIMGIRSLPGAQLIFLDTPGI-DKSG 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+M+K ++ AD I+ +V+A + D+++ E + + PILL +NK DL
Sbjct: 71 GYFHRLMVKTATNSLEGADLILWIVEAPDPLSQGDKLILEIL--KRVTSPILLAVNKVDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + ++ + E++P+SA G V + ++ LP GP YP D +++ P
Sbjct: 129 VQKESLLPTIDRFRSLLPFAEIVPISATKGDNVALLESLLVQYLPEGPPLYPPDQLTDQP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
+RF + E+IRE++F EVPYA V V +TR A ++ I VEK+SQK I+IG
Sbjct: 189 DRFIIAELIRERVFRSVYQEVPYAVAVLVEKVRTREGRALTDVEATIYVEKDSQKAIIIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+GG LK + R +IE L +V+L++ VKV+ +W++D+ L+ GY
Sbjct: 249 RGGAMLKRIGELVRPEIERLLGTQVFLKLWVKVRSDWQKDDEALRRLGY 297
>gi|188994054|ref|YP_001928306.1| GTP-binding protein Era [Porphyromonas gingivalis ATCC 33277]
gi|188593734|dbj|BAG32709.1| putative GTP-binding protein [Porphyromonas gingivalis ATCC 33277]
Length = 299
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 178/288 (61%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DTPG++
Sbjct: 14 NIVGNPNVGKSTLMNLLVGERISIITSKAQTTRHRIMGIVNTPEMQIVYSDTPGVLRPN- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M + SA +AD +V + D + ++ + L + + P+LLV+NK DL
Sbjct: 73 YKLQQEMREFSESALGDADVLVYVTDVVEKADKNADFLARV---SRMECPVLLVINKIDL 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ K +E + E+ P+SA V ++ I + +P P Y+ KD +++ P
Sbjct: 130 SNQEALEKLVEEWRNILPKAEIHPLSATNNFNVGLLQKRIESLIPPSPPYFEKDALTDKP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y+ E+PYA +V V +K T I+ I+VE+NSQK I+IG
Sbjct: 190 ARFFVTEIIREKILLYYQKEIPYAAEVVVEEFKEEKTIIR-IKSLIIVERNSQKGIIIGP 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G A+K + + AR D+E F KK++LEI VKV+++WR + LL+ +GY
Sbjct: 249 KGAAIKRVGSMARRDLERFFGKKIFLEIFVKVEKDWRNRDNLLRAFGY 296
>gi|317504952|ref|ZP_07962901.1| GTP-binding protein Era [Prevotella salivae DSM 15606]
gi|315663944|gb|EFV03662.1| GTP-binding protein Era [Prevotella salivae DSM 15606]
Length = 293
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTEDCQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM+ SA +AD ++ + D + PE+ + L++ + +P++L++NK D
Sbjct: 68 KM-QEMMLAFSESALKDADILLYVTDVVENPEKNIDFLDKV---KQLPIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
E+ + + E++P+SAK GVE + I LP PAY+ KD +++ P
Sbjct: 124 SNQKELGTIVTKWHSLLPNAEILPISAKNKFGVELLMKRIKELLPESPAYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV E+IREKI + Y E+PY+ +V V +K T+ I I VE++SQK I+IG
Sbjct: 184 AKFFVSEMIREKILLYYDKEIPYSVEVRVEQFKETDTSIH-INAVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK +++ AR +E F KK+YLE VKV ++WR + L +GY
Sbjct: 243 KGIALKKVSSEARKALEKFFDKKIYLETFVKVDKDWRSSQRELDSFGYN 291
>gi|392395105|ref|YP_006431707.1| GTP-binding protein Era [Desulfitobacterium dehalogenans ATCC
51507]
gi|390526183|gb|AFM01914.1| GTP-binding protein Era [Desulfitobacterium dehalogenans ATCC
51507]
Length = 303
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q++ DTPGI + K
Sbjct: 16 TVVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQIVFLDTPGIHKPK- 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + D I+ +VD +E + E + + K P +L+LNK DL
Sbjct: 75 HKLGEFMVDSALESLREVDLILYMVDTTADFGAGEEYILENL--KQVKTPCILLLNKIDL 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+ ++ K ++ Y D +IP+SAK G +++ I ++P GP YYP+D V++ P
Sbjct: 133 IEKDKLLKLIKDYSALKDFLAIIPISAKTGENKDELLKVIFKEMPQGPMYYPEDEVTDQP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E++REK+ R+EVP++ V V S + + T ++ IVVE++SQK I+IG+
Sbjct: 193 ERFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKKTLIK-VRALIVVERDSQKGIIIGQ 251
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + AR DIE L KV+LE+ VKV+++WR L+ +GY
Sbjct: 252 GGSLLKEIGRLARQDIETLLGSKVFLELFVKVEKDWRNRGRSLREFGY 299
>gi|335029848|ref|ZP_08523350.1| GTP-binding protein Era [Streptococcus infantis SK1076]
gi|334267990|gb|EGL86440.1| GTP-binding protein Era [Streptococcus infantis SK1076]
Length = 299
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K + K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEESDKVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGTMARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|340351980|ref|ZP_08674871.1| GTP-binding protein Era [Prevotella pallens ATCC 700821]
gi|339615841|gb|EGQ20508.1| GTP-binding protein Era [Prevotella pallens ATCC 700821]
Length = 293
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 174/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTENMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M +M++ SA +AD ++ + D + PE+ + L++ K +P++L++NK D
Sbjct: 68 KM-QELMLQFSESALADADILLYVTDVIEKPEKNADFLDKVA---KMTIPVILLINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + E++P+SAK G + + I LP PAY+ KD +++ P
Sbjct: 124 SNQETLITLVEKWHNLLPKAEILPISAKNKFGTDVLMKRIEELLPESPAYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK I+IG
Sbjct: 184 AKFFVTEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAIIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ALK ++T AR +E F K++YLE VKV ++WR + L ++GY
Sbjct: 243 QGQALKKVSTEARKSLEKFFDKRIYLETYVKVDKDWRNSQKELGNFGYN 291
>gi|449896752|ref|ZP_21789912.1| GTP-binding protein Era [Streptococcus mutans R221]
gi|449261717|gb|EMC59183.1| GTP-binding protein Era [Streptococcus mutans R221]
Length = 299
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KRGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|334147073|ref|YP_004510002.1| GTP-binding protein Era [Porphyromonas gingivalis TDC60]
gi|333804229|dbj|BAK25436.1| GTP-binding protein Era [Porphyromonas gingivalis TDC60]
Length = 299
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 178/288 (61%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DTPG++
Sbjct: 14 NIVGNPNVGKSTLMNLLVGERISIITSKAQTTRHRIMGIVNTPEMQIVYSDTPGVLRPN- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M + SA +AD +V + D + ++ + L + + P+LLV+NK DL
Sbjct: 73 YKLQQEMREFSESALGDADVLVYVTDVVEKADKNADFLARV---SRMECPVLLVINKIDL 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ K +E + E+ P+SA V ++ I + +P P Y+ KD +++ P
Sbjct: 130 SNQEALEKLVEEWHNILPKAEIHPLSATNNFNVGLLQKRIESLIPPSPPYFEKDALTDKP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y+ E+PYA +V V +K T I+ I+VE+NSQK I+IG
Sbjct: 190 ARFFVTEIIREKILLYYQKEIPYAAEVVVEEFKEEKTIIR-IKSLIIVERNSQKGIIIGP 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G A+K + + AR D+E F KK++LEI VKV+++WR + LL+ +GY
Sbjct: 249 KGAAIKRVGSMARRDLERFFGKKIFLEIFVKVEKDWRNRDNLLRAFGY 296
>gi|343500462|ref|ZP_08738355.1| GTPase Era [Vibrio tubiashii ATCC 19109]
gi|418481440|ref|ZP_13050483.1| GTPase Era [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820306|gb|EGU55130.1| GTPase Era [Vibrio tubiashii ATCC 19109]
gi|384570957|gb|EIF01500.1| GTPase Era [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 325
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 187/335 (55%), Gaps = 18/335 (5%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD +F S S D +SP++ H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFD-IDAFFSSS---DEQTSSPEN---------QHCGFVAIVGRPNVGKSTLLN 49
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
+++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 50 RILGQKISITSRKPQTTRHRIMGVDTEGDYQAIFVDTPGLHIEEKRAINRLMNRAANSSL 109
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYE 248
+ + + LVD + +L + K P++L +NK D+++ E+ ++
Sbjct: 110 SDVNLVFFLVDGTHWTADDEMVLTKL---QKSNFPVVLCVNKVDVVQDRNEVMMHMQEVS 166
Query: 249 KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIF 308
+ D +V+P+SAK+G ++ +R + LP ++P++ V++ +RF EI+REK+
Sbjct: 167 RKMDFVDVVPISAKHGKNIDVLRKHVRDHLPKATHHFPEEYVTDRSQRFMASEIVREKLM 226
Query: 309 MQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAAR 367
E+PY+ V + + P F I I+VE+ QK ++IGKGG+ +K + AR
Sbjct: 227 RFTGEELPYSVTVEIERFDYNPETDGFHINALILVERLGQKKMVIGKGGEKIKTIGREAR 286
Query: 368 LDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 287 LDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 321
>gi|282880853|ref|ZP_06289546.1| GTP-binding protein Era [Prevotella timonensis CRIS 5C-B1]
gi|281305235|gb|EFA97302.1| GTP-binding protein Era [Prevotella timonensis CRIS 5C-B1]
Length = 293
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 174/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKSQTTRHRIMGIVNTDDMQIVFSDTPGVLQPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M + M+ + SA +AD ++ + D + PE+ + LE+ K +P++L++NK D
Sbjct: 68 KMQEYMLAFS-ESALADADILLYVTDVVETPEKNIDFLEKV---RKMTIPVILLINKIDQ 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + +E + E++P+SA G++ + + I LP P Y+ KD +++ P
Sbjct: 124 SNQKTLDQLVEKWHGILPNAEILPISASNKFGIDVLLNRIQELLPDSPPYFGKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EI REKI + Y E+PY+ +V V S+K + I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIFREKILLFYDKEIPYSVEVKVDSFK-ETEQQIHIHAVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F KK+YLE VKV +NWR L +GY
Sbjct: 243 QGMALKKVSTEARKALEKFFGKKIYLETFVKVDKNWRNSTRELNSFGYN 291
>gi|345882256|ref|ZP_08833761.1| GTP-binding protein Era [Prevotella oulorum F0390]
gi|343918012|gb|EGV28784.1| GTP-binding protein Era [Prevotella oulorum F0390]
Length = 294
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 9 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNEDDCQIVFSDTPGVLKPNY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM+ SA +AD ++ + D + PE+ + L++ + ++P+LL++NK D
Sbjct: 69 KM-QEMMLAFSESALTDADILLYVTDVVENPEKNLDFLDKV---KRMQIPVLLLVNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + + E++P+SAK G++ + I LP PAY+ K+ +++ P
Sbjct: 125 TNQQQLGDIVSRWHTLLPNAEILPLSAKNKFGIDILLRRIKELLPESPAYFDKEQLTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI + Y E+PY+ +V V +K TA I I VE++SQK I+IG
Sbjct: 185 AKFFVSEIIREKILLYYDKEIPYSVEVRVEQFKETETAIR-INAVIYVERDSQKGIIIGH 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK + T AR +E F KK++LE VKV ++WR + L +GY
Sbjct: 244 QGVALKKVNTEARKALEKFFAKKIFLETFVKVDKDWRSSQRELNSFGYN 292
>gi|319790169|ref|YP_004151802.1| GTP-binding protein Era [Thermovibrio ammonificans HB-1]
gi|317114671|gb|ADU97161.1| GTP-binding protein Era [Thermovibrio ammonificans HB-1]
Length = 305
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 186/294 (63%), Gaps = 9/294 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKSTL N ++G K++IVT+KPQTTRHRI+G+ + Q++ DTPGI ++K
Sbjct: 13 AILGRPNVGKSTLLNSLLGTKVAIVTDKPQTTRHRIVGVKHLKDAQIVFLDTPGIHKEKF 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK-LPILLVLNKKD 233
L+ M + S +AD I+ L+DA + D + + +G+ K K +++V+NK D
Sbjct: 73 E-LNRYMNEIAFSVVPDADIILFLIDARQGLTEADRKILQKIGEEKRKDTKVIVVINKID 131
Query: 234 LIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
+ E+ + E +++F VDE+IP+SA G ++ + + +L LP GP YY + +V++
Sbjct: 132 GVNKEELLPLIEEIHKEFPFVDEIIPISASRGTNLDRLLELLLKYLPEGPKYYEEHMVTD 191
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD----FIQVEIVVEKNSQK 348
P F+ EIIREKI + R EVP+A V VV+ + P K+ I +I+VEK+SQK
Sbjct: 192 QPLEQFIAEIIREKIMLLTREEVPHATTVQVVNIQ--PGDKNPNMLVIDADIIVEKDSQK 249
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGG+ LK + AR ++E L K+VYL + VKVKE+WR L+ GY
Sbjct: 250 AIIIGKGGQRLKKIGQLAREELEQLLGKRVYLRLWVKVKEDWRSRPEQLRGLGY 303
>gi|257865833|ref|ZP_05645486.1| GTP-binding protein Era [Enterococcus casseliflavus EC30]
gi|257872168|ref|ZP_05651821.1| GTP-binding protein Era [Enterococcus casseliflavus EC10]
gi|257875461|ref|ZP_05655114.1| GTP-binding protein Era [Enterococcus casseliflavus EC20]
gi|325569848|ref|ZP_08145842.1| GTP-binding protein Era [Enterococcus casseliflavus ATCC 12755]
gi|257799767|gb|EEV28819.1| GTP-binding protein Era [Enterococcus casseliflavus EC30]
gi|257806332|gb|EEV35154.1| GTP-binding protein Era [Enterococcus casseliflavus EC10]
gi|257809627|gb|EEV38447.1| GTP-binding protein Era [Enterococcus casseliflavus EC20]
gi|325156971|gb|EGC69139.1| GTP-binding protein Era [Enterococcus casseliflavus ATCC 12755]
Length = 299
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 184/302 (60%), Gaps = 21/302 (6%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + + Q+I DTP
Sbjct: 3 THKSGFVAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQLIFIDTP 62
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HK 220
GI + K H L M++ SA D + ++ A ++ G GD +
Sbjct: 63 GIHKPK-HRLGDFMVETAYSALREVDVTLFMI---SADQK------RGKGDDFIIERLRQ 112
Query: 221 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
+ P+ LV+NK D + P + +E Y D E++P+SA G+ E + ++ ++P
Sbjct: 113 SQTPVFLVINKIDKVHPDALLAIIEDYSSQMDFAEIVPISATEGNNFETLMKLLIDEMPE 172
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP Y+P+D +++HPE F V E++REK+ + R+EVP++ V V S K K IQ I
Sbjct: 173 GPQYFPEDQITDHPEYFIVSELVREKVLLLTRDEVPHSVAVVVDSMKRDHNDKVHIQATI 232
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
+VE++SQK I+IGKGGK LK + T ARLDIE L KV+LE+ VKV+++WR + L Y
Sbjct: 233 IVERDSQKGIIIGKGGKMLKQIGTKARLDIEHLLDDKVFLELWVKVQKDWRDKQTFLTDY 292
Query: 401 GY 402
GY
Sbjct: 293 GY 294
>gi|257065848|ref|YP_003152104.1| GTP-binding protein Era [Anaerococcus prevotii DSM 20548]
gi|256797728|gb|ACV28383.1| GTP-binding protein Era [Anaerococcus prevotii DSM 20548]
Length = 293
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 176/290 (60%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+ NVGKSTL ++IG+K+SI++NKPQTTR +I I + E Q+I DTPGI +
Sbjct: 8 SVVGRANVGKSTLMEKIIGEKISIISNKPQTTRDKIQIIYNDEESQIIFLDTPGIQTPRN 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-EILEEGVGDHKDKLPILLVLNKKD 233
+ + ++ + S +D I ++VD + RID EILE K KLP +L++NK D
Sbjct: 68 KLQERLLTFSEESLK-ESDIITMVVDDSEEIGRIDGEILEML---EKIKLPKILLINKTD 123
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
L +IA E + + D D +I +SA G ++ D I L GPAYY +D++++
Sbjct: 124 LADREKIAHIRENF-RACDFDRIIEISALEGENIDVFIDTIKEMLDFGPAYYDRDMITDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
ERF VGEIIREK NEVP+ V + +K R K I+ IVVEKNS K I+I
Sbjct: 183 TERFIVGEIIREKALRNLSNEVPHGVAVRIDDFKERSNKKLIDIRATIVVEKNSHKEIVI 242
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G+ +K + AR +IE FL KV L++ VKV+++WR+ E L+ +GY
Sbjct: 243 GKNGQMIKRIGMDARKEIEKFLSSKVNLQLWVKVEKDWRKKEKLVDRFGY 292
>gi|449951164|ref|ZP_21808545.1| GTP-binding protein Era [Streptococcus mutans 11SSST2]
gi|449166521|gb|EMB69455.1| GTP-binding protein Era [Streptococcus mutans 11SSST2]
Length = 299
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFIVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|336064759|ref|YP_004559618.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
gi|334282959|dbj|BAK30532.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
Length = 298
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 67 NALGDFMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLMNILKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKILKLTEQEVPHSVAVIVESMKRDPETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGTMLKKIGKMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|91794116|ref|YP_563767.1| GTP-binding protein Era [Shewanella denitrificans OS217]
gi|91716118|gb|ABE56044.1| GTP-binding protein Era [Shewanella denitrificans OS217]
Length = 334
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 18/298 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+GI + Q++ DTPG+ +
Sbjct: 44 AIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRIMGIHTDGPSQVVFIDTPGLHIDEQ 103
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK-APERIDEILEEGVGDHKDKLPILLVLNKKD 233
++ +M + S+ + ++ +VDA P+ DE++ + +G + ++L +NK D
Sbjct: 104 RAINRLMNRAAASSLADVSMVIFVVDAMNWTPD--DEMVLKKIGYSDQERKVVLAINKVD 161
Query: 234 LIKP--------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
IK EIAKK + DE++P+SA G ++ I D LP G Y+
Sbjct: 162 NIKDKEALFPYLNEIAKKFNF-------DEILPISATKGTNIQRILDMARESLPEGDFYF 214
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P+D V++ +RF EI+REK+ +E+PY C V + +K I I+VE+
Sbjct: 215 PEDYVTDRSQRFMASEIVREKLMRFLGDELPYDCTVEIEQFKMMENGVYQINALILVERE 274
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
QK ++IG G+ ++ +AT ARLD+E+ KV+LE+ VKVK W DE L+ GYG
Sbjct: 275 GQKRMVIGNKGERIRTIATQARLDMENLFDNKVFLEVWVKVKSGWADDERALRSLGYG 332
>gi|288905822|ref|YP_003431044.1| GTP-binding protein era [Streptococcus gallolyticus UCN34]
gi|306831911|ref|ZP_07465066.1| GTP-binding protein Era [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306834025|ref|ZP_07467146.1| GTP-binding protein Era [Streptococcus bovis ATCC 700338]
gi|325978857|ref|YP_004288573.1| GTP-binding protein era [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338291|ref|YP_006034460.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732548|emb|CBI14120.1| GTP-binding protein era [Streptococcus gallolyticus UCN34]
gi|304423813|gb|EFM26958.1| GTP-binding protein Era [Streptococcus bovis ATCC 700338]
gi|304425837|gb|EFM28954.1| GTP-binding protein Era [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178785|emb|CBZ48829.1| era, yqfH, sdgE, bex, rbaA GTP-binding protein era homolog
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|334280927|dbj|BAK28501.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 298
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 67 NALGDFMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLMNILKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKILKLTEQEVPHSVAVIVESMKRDPETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGAMLKKIGKMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|89895851|ref|YP_519338.1| hypothetical protein DSY3105 [Desulfitobacterium hafniense Y51]
gi|89335299|dbj|BAE84894.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 303
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 180/302 (59%), Gaps = 10/302 (3%)
Query: 107 YASHPNHK------SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 160
+ S PN +V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q
Sbjct: 2 HGSEPNRDFRSGFVTVVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQ 61
Query: 161 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 220
++ DTPGI + K H L M+ + + D I+ +VD +E + E +
Sbjct: 62 IVFLDTPGIHKPK-HKLGEFMVDSALESLREVDLILYMVDTTAEFGAGEEYILENL--KH 118
Query: 221 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
K P +L+LNK DLI+ ++ K ++ Y D ++P+SAK G +++ I ++P
Sbjct: 119 VKTPCILLLNKIDLIEKDKLLKLIKDYSALKDFLAILPISAKTGENKDELLKLIFKEMPQ 178
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP YYP+D V++ PERF + E++REK+ R+EVP++ V V S + + T ++ I
Sbjct: 179 GPMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKKTLIK-VRALI 237
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
VVE++SQK I+IG GG LK + AR DIE L KV+LE+ VKV+++WR L+ +
Sbjct: 238 VVERDSQKGIIIGHGGSLLKEIGRLARQDIETLLGSKVFLELFVKVEKDWRNRGRSLREF 297
Query: 401 GY 402
GY
Sbjct: 298 GY 299
>gi|219670281|ref|YP_002460716.1| GTP-binding protein Era [Desulfitobacterium hafniense DCB-2]
gi|219540541|gb|ACL22280.1| GTP-binding protein Era [Desulfitobacterium hafniense DCB-2]
Length = 303
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 180/302 (59%), Gaps = 10/302 (3%)
Query: 107 YASHPNHK------SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 160
+ S PN +V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q
Sbjct: 2 HGSEPNRDFRSGFVTVVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQ 61
Query: 161 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 220
++ DTPGI + K H L M+ + + D I+ +VD +E + E +
Sbjct: 62 VVFLDTPGIHKPK-HKLGEFMVDSALESLREVDLILYMVDTTAEFGAGEEYILENL--KH 118
Query: 221 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
K P +L+LNK DLI+ ++ K ++ Y D ++P+SAK G +++ I ++P
Sbjct: 119 VKTPCILLLNKIDLIEKDKLLKLIKDYSALKDFLAILPISAKTGENKDELLKLIFKEMPQ 178
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP YYP+D V++ PERF + E++REK+ R+EVP++ V V S + + T ++ I
Sbjct: 179 GPMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKKTLIK-VRALI 237
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
VVE++SQK I+IG GG LK + AR DIE L KV+LE+ VKV+++WR L+ +
Sbjct: 238 VVERDSQKGIIIGHGGSLLKEIGRLARQDIETLLGSKVFLELFVKVEKDWRNRGRSLREF 297
Query: 401 GY 402
GY
Sbjct: 298 GY 299
>gi|449966397|ref|ZP_21812343.1| GTP-binding protein Era [Streptococcus mutans 15VF2]
gi|449170161|gb|EMB72893.1| GTP-binding protein Era [Streptococcus mutans 15VF2]
Length = 299
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ ++ A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMIPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|330828483|ref|YP_004391435.1| GTP-binding protein era [Aeromonas veronii B565]
gi|406678311|ref|ZP_11085488.1| GTPase Era [Aeromonas veronii AMC35]
gi|423200976|ref|ZP_17187556.1| GTPase Era [Aeromonas veronii AER39]
gi|423203830|ref|ZP_17190386.1| GTPase Era [Aeromonas veronii AMC34]
gi|423210832|ref|ZP_17197385.1| GTPase Era [Aeromonas veronii AER397]
gi|328803619|gb|AEB48818.1| GTP-binding protein era [Aeromonas veronii B565]
gi|404614550|gb|EKB11530.1| GTPase Era [Aeromonas veronii AER397]
gi|404617959|gb|EKB14880.1| GTPase Era [Aeromonas veronii AER39]
gi|404622740|gb|EKB19600.1| GTPase Era [Aeromonas veronii AMC35]
gi|404628522|gb|EKB25302.1| GTPase Era [Aeromonas veronii AMC34]
Length = 299
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 173/291 (59%), Gaps = 6/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRILGI + YQ I DTPG+ ++
Sbjct: 11 AIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEDNYQTIYVDTPGLHIEEK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD-KLPILLVLNKKD 233
++ +M + S+ + +V +VD + DE++ +G ++ K P++L +NK D
Sbjct: 71 RAINRLMNRAATSSLGDVAMVVFMVDGTHWT-KDDEMV---LGKLRNLKCPVVLAVNKID 126
Query: 234 LIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
+K E + LEW + + ++P+SA+ G VE IR+W LP ++P+D V++
Sbjct: 127 NVKEKEDLLPHLEWLGQQMNFAHILPISAEKGTNVEKIREWAKDLLPENVHFFPEDYVTD 186
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
RF EIIREK+ E+PY+ V + +K I I+VE++ QK ++I
Sbjct: 187 RSSRFMASEIIREKLMRFTGEELPYSVTVEIERFKVEENGLYHIHGLILVERDGQKKMVI 246
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G+ +K + T ARLD+E Q KV+LE+ VKVK W DE L+ GYG
Sbjct: 247 GNKGEKIKTIGTEARLDMERLFQNKVHLELWVKVKSGWADDERALRSLGYG 297
>gi|421854665|ref|ZP_16287050.1| GTPase Era [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
gi|403189680|dbj|GAB73251.1| GTPase Era [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
Length = 342
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 189/345 (54%), Gaps = 32/345 (9%)
Query: 86 LSEKPDRNMA-----SPDDYEIEEF----------DYASHPNHKSVLGKPNVGKSTLANQ 130
+S +PD+N +PD+ I++F D+ S +++G+PNVGKSTL N
Sbjct: 1 MSIQPDQNSTDQESNTPDNNLIDQFFSSQGVTIPADFKS--GFVAIVGRPNVGKSTLMNH 58
Query: 131 MIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGI 190
++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA
Sbjct: 59 LLGQKLSITSRKPQTTRHKIIGIDSREKSQAVYVDTPGMHKKEVRAINKMMNRAAHSALR 118
Query: 191 NADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKL-EWYEK 249
+ + ++ VDA K + D +LE+ ++P++LV+NK D I+ L + K
Sbjct: 119 DVNLVLFAVDAHKWTQNDDLVLEKL---KNAEMPVILVINKIDTIEEKRTLLPLIQERTK 175
Query: 250 FTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFM 309
+ E++PVSA G +E +RD I LP P Y D +++ ERF E+IREKI
Sbjct: 176 LMNFVEIVPVSALRGANLEHLRDTIDKYLPFQPPLYSFDQITDRSERFLASEVIREKIMR 235
Query: 310 QYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVVEKNSQKIILIGKGGKA 358
Q E+PY V + S+KT A + +I I V++ QK I+IG+ G
Sbjct: 236 QLGEELPYDLTVQIESFKTEEPALNEKTGRMKAACTYIDATIFVDRPGQKAIVIGEKGAK 295
Query: 359 LKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
LK + AR+D+E ++K+ L + VKVK W DE LK GY
Sbjct: 296 LKKIGMDARIDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGYS 340
>gi|227432225|ref|ZP_03914221.1| GTP-binding protein Era [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227351998|gb|EEJ42228.1| GTP-binding protein Era [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 303
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 177/289 (61%), Gaps = 3/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + + Q++ DTPG+ K
Sbjct: 12 AIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDDAQVVFIDTPGV-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K+ SA AD I +VDA A R D+ + + + + K+ PI L++NK DL
Sbjct: 71 NSLGDFMVKSAFSALHEADAIWFVVDAAMARGRGDDFIIDRLQEVKNT-PIYLLINKVDL 129
Query: 235 IKPGEIAKKLEWYEK-FTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P ++ + Y+ ++ EV P+SA G V ++ D I++ L GP Y+ D +++H
Sbjct: 130 LAPNDLLDVIASYQNDASEWAEVFPISATEGDNVPELLDNIVSHLDEGPQYFDADQLTDH 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK I+IG
Sbjct: 190 PERFVIGELIREKVLQLTRQEVPHSVAVVIDKIARENEEKIHIQASIIVERPTQKNIIIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G +K + T AR DIE L KV+LE VKV+ WR L+ GY
Sbjct: 250 KQGAMIKDIGTRARKDIERLLGDKVFLETWVKVEPRWRDRPQALQTLGY 298
>gi|224368191|ref|YP_002602354.1| hypothetical protein HRM2_10780 [Desulfobacterium autotrophicum
HRM2]
gi|223690907|gb|ACN14190.1| Era [Desulfobacterium autotrophicum HRM2]
Length = 300
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 169/288 (58%), Gaps = 4/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PN GKSTL N ++GQK+SI + KPQTTR RILG+ P Q+I DTPGI +
Sbjct: 17 AIVGAPNAGKSTLLNTVLGQKISITSKKPQTTRDRILGVVERPGAQIIFVDTPGI-HRAH 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+L+ ++ SA + D +++++D + ++ E + K ++L LNK DL
Sbjct: 76 SLLNKKIVDQALSAVDDVDAVLLMIDVTSKDTESEALIIEQL--QKRNKAVVLALNKIDL 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K EI + Y + VIPVSAK G E + + LP G +PKD +++
Sbjct: 134 VKSNEILPLIARYASLHEFKAVIPVSAKTGDQTEKLLAEVQRCLPPGQRLFPKDTLTDVS 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+RF GE+IREK+F E+PY+ V V ++K P + I I V+++SQK I+IGK
Sbjct: 194 QRFIAGEMIREKVFRLTGMEIPYSIAVTVDAFKETPRLTE-IHATIHVDRDSQKGIIIGK 252
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ LK + AR+DI+ KV L++ V+V +NW +DE ++K +GY
Sbjct: 253 GGQMLKQIGAKARMDIQRMTGTKVMLKLFVRVTKNWSRDERIMKEFGY 300
>gi|281425283|ref|ZP_06256196.1| hypothetical protein HMPREF0971_02255 [Prevotella oris F0302]
gi|281400576|gb|EFB31407.1| GTP-binding protein Era [Prevotella oris F0302]
Length = 293
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 178/292 (60%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDCQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNK--- 231
M MM+ SA +AD ++ + D + PE+ + L++ K K+P+LL++NK
Sbjct: 68 KM-QEMMLAFSESALTDADILLYVTDVVENPEKNMDFLDKV---KKMKIPVLLLVNKIDE 123
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D G+I K W+ + E++P+SAK GV+ + I LP PAY+ KD ++
Sbjct: 124 SDQKTLGDIVTK--WHSLLPNA-EILPLSAKNKFGVDMLLKRIKELLPESPAYFDKDQLT 180
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ P +FFV EIIREKI + Y E+PY+ +V V +K + I I VE++SQK I+
Sbjct: 181 DKPAKFFVSEIIREKILLYYDKEIPYSVEVRVERFKENDSVIH-INAVIYVERDSQKGII 239
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
IG G ALK +++ AR +E F KK++LE VKV ++WR + L +GY
Sbjct: 240 IGHQGIALKKVSSEARKALEKFFGKKIFLETFVKVDKDWRSSQRELDSFGYN 291
>gi|293376339|ref|ZP_06622576.1| GTP-binding protein Era [Turicibacter sanguinis PC909]
gi|325843413|ref|ZP_08167971.1| ribosome biogenesis GTPase Era [Turicibacter sp. HGF1]
gi|292645028|gb|EFF63101.1| GTP-binding protein Era [Turicibacter sanguinis PC909]
gi|325489335|gb|EGC91709.1| ribosome biogenesis GTPase Era [Turicibacter sp. HGF1]
Length = 302
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 173/290 (59%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKST NQ++G+K++I+++KPQTTR++I G+ + + Q I DTPGI + K
Sbjct: 12 SIIGRPNVGKSTFLNQVLGKKIAIMSDKPQTTRNKIQGVITDADSQTIFIDTPGIHKPK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M D ++ +V+A + + D + E + + K P+ LV+NK DL
Sbjct: 71 HELGKFMTDLAIGTLNEVDAVMFMVNATEKVGKGDRFIIEHLQNVKQ--PVFLVINKIDL 128
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I E+ + + + + +IP+SA G VE + I LP GP +YP D +++HP
Sbjct: 129 ITKEELLTVIASFREEYNFAGIIPISAMTGENVETLISVIKEALPEGPQFYPSDYITDHP 188
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQKIILI 352
ERF + E+IREK+ EVP++ V V+ + K+ I V IVVE+ SQK ILI
Sbjct: 189 ERFIISELIREKVLHLTHEEVPHSVAV-VIDKIEKVEGKNVIDVMATIVVERPSQKGILI 247
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGGK LK + T AR DI L K+YLE+ VKV+++WR + L +GY
Sbjct: 248 GKGGKMLKDIGTLARKDIVKLLGTKIYLELWVKVQKDWRNKKLYLNDFGY 297
>gi|373494656|ref|ZP_09585257.1| GTP-binding protein Era [Eubacterium infirmum F0142]
gi|371968099|gb|EHO85563.1| GTP-binding protein Era [Eubacterium infirmum F0142]
Length = 299
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 171/298 (57%), Gaps = 19/298 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICS-----GPEYQMILYDTPGI 169
++G+PNVGKSTL N ++G+K++I T+KPQTTR+ I GI + G Q++ DTPGI
Sbjct: 7 GIIGRPNVGKSTLLNSILGEKIAITTDKPQTTRNSIRGIYTEHTEDGDSSQIVFIDTPGI 66
Query: 170 IEKKIH-----MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 224
K H +D + +K + D I+ LVD R D + + + D + P
Sbjct: 67 --HKAHNKLGAAMDDIAIKTYK----EVDVILFLVDGSPDKGRGDTYILDMIKDVE--TP 118
Query: 225 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
LV+NK D + P E K + YEK DE+ +SA G V+ + I L GP +
Sbjct: 119 KFLVINKVDTMDPEEFKKTYDVYEKMGIFDEIFGISALKGTHVKRLVKAIQGYLEEGPMF 178
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 344
+P+D+V++HPERF V EIIREK+ M EVP+ V + SYK P + I I E+
Sbjct: 179 FPEDMVTDHPERFIVSEIIREKLLMYLNEEVPHGVAVEIESYKEDPKLTE-IGAVIYCER 237
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
S K I+IGK GK LK + +ARL+IE L +VYLE+ VKVKENWR + + ++GY
Sbjct: 238 KSHKGIIIGKQGKKLKGIGKSARLEIEALLGTRVYLELFVKVKENWRDSDFAISNFGY 295
>gi|294793788|ref|ZP_06758925.1| GTP-binding protein Era [Veillonella sp. 3_1_44]
gi|294455358|gb|EFG23730.1| GTP-binding protein Era [Veillonella sp. 3_1_44]
Length = 307
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+ + K
Sbjct: 21 AVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDESKQIVFMDTPGVHKPK- 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 80 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVVNKIDT 137
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K E+ + + +Y+ VIP+SAK + +I + LP GP Y+P+D++++ P
Sbjct: 138 LKKEELLEAIVFYQDAYPFAGVIPISAKDKENLSEILKVLEETLPEGPQYFPEDMITDQP 197
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK I+IGK
Sbjct: 198 ERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGK 257
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK L AR DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 258 KGALLKQLGAEARADIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGY 305
>gi|428769032|ref|YP_007160822.1| GTP-binding protein Era-like-protein [Cyanobacterium aponinum PCC
10605]
gi|428683311|gb|AFZ52778.1| GTP-binding protein Era-like-protein [Cyanobacterium aponinum PCC
10605]
Length = 313
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 192/319 (60%), Gaps = 21/319 (6%)
Query: 94 MASPDDYEIEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHR 149
M++P++ + A P+ KS ++G+PNVGKSTL N+++GQK++I + QTTR+R
Sbjct: 1 MSNPNESFLPIIPVAP-PDFKSGFIAIIGRPNVGKSTLMNELVGQKVAITSPVAQTTRNR 59
Query: 150 ILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID 209
+ GI + P Q+I DTPGI K H L ++++N SA N D ++ +VDA + D
Sbjct: 60 LRGILTTPSAQIIFVDTPGI-HKPHHELGKVLVQNAVSAINNVDLVLFVVDASQPAGGGD 118
Query: 210 EILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE----VIPVSAKYGH 265
+ + + K K P++L LNK DL + +KK E + ++ + +I SA G
Sbjct: 119 RYITDLL--LKSKTPVILGLNKSDL----QGSKKESLNESYQEICQENWQMINFSAITGE 172
Query: 266 GVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV-- 323
G++ ++ ++ KL +GP YYP D+V++ PERF +GE+IRE+I + R E+P++ V V
Sbjct: 173 GLDKLQQELINKLDVGPYYYPPDLVTDQPERFIIGELIREQILLHTREEIPHSVAVTVEK 232
Query: 324 VSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIE 383
V +T+ T I I VE++SQK I+IG+ G+ LK + TA+R ++ L KVYLE+
Sbjct: 233 VVEETKITK---IYAAISVERSSQKGIIIGQKGQMLKTIGTASRQQMQKLLSGKVYLELF 289
Query: 384 VKVKENWRQDEGLLKHYGY 402
VKV+ WRQ L +GY
Sbjct: 290 VKVEPKWRQSRLRLAEFGY 308
>gi|398817961|ref|ZP_10576560.1| GTP-binding protein Era [Brevibacillus sp. BC25]
gi|398028759|gb|EJL22262.1| GTP-binding protein Era [Brevibacillus sp. BC25]
Length = 305
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 175/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++G K++I++NKPQTTR++I + + E Q+I DTPGI K
Sbjct: 16 SIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEEGQIIFLDTPGI-HKPQ 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L + M+ + D ++ +VDA + D+ + E + + K P+ LV+NK D
Sbjct: 75 SKLGNYMVSVAENTLNEVDLVLFVVDATEKRGAGDDYIIERL--KQVKTPVFLVINKIDK 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++ Y K D +++P+SA G+ ++ IL ++ GP YYP D V++HP
Sbjct: 133 VHPEALLPIIDDYRKLYDFKQIVPISALEGNNTGSLQQAILGEMEEGPMYYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF E+IREK+ R EVP++ V + K K +I I VE++SQ+ ILIG
Sbjct: 193 ERFVAAELIREKVLHLTREEVPHSIAVVIEEMKRGENGKTLYIYAAIYVERDSQRGILIG 252
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ G+ LK + AR DIE + +V+LE+ +KVK++WR E +L+++G+
Sbjct: 253 QKGQMLKEIGQRARKDIERLMGDQVFLELWIKVKKDWRNQERMLRNFGF 301
>gi|420262413|ref|ZP_14765054.1| GTP-binding protein Era [Enterococcus sp. C1]
gi|394770170|gb|EJF49974.1| GTP-binding protein Era [Enterococcus sp. C1]
Length = 299
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 184/302 (60%), Gaps = 21/302 (6%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + + Q+I DTP
Sbjct: 3 THKSGFVAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQLIFIDTP 62
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HK 220
GI + K H L M++ SA D + ++ A ++ G GD +
Sbjct: 63 GIHKPK-HRLGDFMVETAYSALREVDVTLFMI---SADQK------RGKGDDFIIERLRQ 112
Query: 221 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 280
+ P+ LV+NK D + P + +E Y D E++P+SA G+ E + ++ ++P
Sbjct: 113 SQTPVFLVINKIDKVHPDALLAIIEDYSSQMDFAEIVPISATEGNNFETLMKLLVDEMPE 172
Query: 281 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 340
GP Y+P+D +++HPE F V E++REK+ + R+EVP++ V V S K K IQ I
Sbjct: 173 GPQYFPEDQITDHPEYFIVSELVREKVLLLTRDEVPHSVAVVVDSMKRDHNDKVHIQATI 232
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
+VE++SQK I+IGKGGK LK + T ARLDIE L KV+LE+ VKV+++WR + L Y
Sbjct: 233 IVERDSQKGIIIGKGGKMLKQIGTKARLDIEHLLDDKVFLELWVKVQKDWRDKQTFLTDY 292
Query: 401 GY 402
GY
Sbjct: 293 GY 294
>gi|146319051|ref|YP_001198763.1| GTP-binding protein Era [Streptococcus suis 05ZYH33]
gi|146321257|ref|YP_001200968.1| GTP-binding protein Era [Streptococcus suis 98HAH33]
gi|223932650|ref|ZP_03624649.1| GTP-binding protein Era [Streptococcus suis 89/1591]
gi|253752114|ref|YP_003025255.1| GTP-binding protein Era [Streptococcus suis SC84]
gi|253753939|ref|YP_003027080.1| GTP-binding protein Era [Streptococcus suis P1/7]
gi|253755186|ref|YP_003028326.1| GTP-binding protein Era [Streptococcus suis BM407]
gi|330832408|ref|YP_004401233.1| GTP-binding protein Era [Streptococcus suis ST3]
gi|386578233|ref|YP_006074639.1| Small GTP-binding protein Era [Streptococcus suis GZ1]
gi|386580298|ref|YP_006076703.1| GTP-binding protein Era [Streptococcus suis JS14]
gi|386582313|ref|YP_006078717.1| GTP-binding protein Era [Streptococcus suis SS12]
gi|386583669|ref|YP_006080072.1| GTP-binding protein Era [Streptococcus suis D9]
gi|386588500|ref|YP_006084901.1| GTP-binding protein Era [Streptococcus suis A7]
gi|403061869|ref|YP_006650085.1| GTPase Era [Streptococcus suis S735]
gi|189037678|sp|A4W2H9.1|ERA_STRS2 RecName: Full=GTPase Era
gi|189037680|sp|A4VW74.1|ERA_STRSY RecName: Full=GTPase Era
gi|145689857|gb|ABP90363.1| GTPase [Streptococcus suis 05ZYH33]
gi|145692063|gb|ABP92568.1| GTPase [Streptococcus suis 98HAH33]
gi|223898620|gb|EEF64982.1| GTP-binding protein Era [Streptococcus suis 89/1591]
gi|251816403|emb|CAZ52034.1| GTP-binding protein Era homolog [Streptococcus suis SC84]
gi|251817650|emb|CAZ55398.1| GTP-binding protein Era homolog [Streptococcus suis BM407]
gi|251820185|emb|CAR46552.1| GTP-binding protein Era homolog [Streptococcus suis P1/7]
gi|292558696|gb|ADE31697.1| Small GTP-binding protein Era [Streptococcus suis GZ1]
gi|319758490|gb|ADV70432.1| GTP-binding protein Era [Streptococcus suis JS14]
gi|329306631|gb|AEB81047.1| GTP-binding protein Era [Streptococcus suis ST3]
gi|353734459|gb|AER15469.1| GTP-binding protein Era [Streptococcus suis SS12]
gi|353735815|gb|AER16824.1| GTP-binding protein Era [Streptococcus suis D9]
gi|354985661|gb|AER44559.1| GTP-binding protein Era [Streptococcus suis A7]
gi|402809195|gb|AFR00687.1| GTPase Era [Streptococcus suis S735]
Length = 299
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 183/290 (63%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + E Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + + D E++P+SA G+ V + + + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRQQMDFKEIVPISATQGNNVNRLMEILKENLDEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVIESMKRDEFTDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|357059985|ref|ZP_09120759.1| GTP-binding protein Era [Alloprevotella rava F0323]
gi|355376875|gb|EHG24115.1| GTP-binding protein Era [Alloprevotella rava F0323]
Length = 292
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 178/289 (61%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKS+L N + G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 7 NLVGNPNVGKSSLMNLLTGERISIATFKAQTTRHRIMGIVNTDDAQIVFSDTPGVLKPNY 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M ++M+ + SA +AD ++ + D ER D+ + + +P+LL++NK D
Sbjct: 67 KMQEAMLAFS-ESALQDADVLLYVTDVV---ERADKNADFLAKVREMSVPVLLLINKIDT 122
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ + + EW+E+ E+ PVSAK V+ + I LP P Y+ +D ++
Sbjct: 123 SNQQDLERLVNEWHEQLPKA-EIFPVSAKAKFNVDTVLRRIKELLPEAPPYFERDQWTDK 181
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
P RFFV EIIREKI + Y E+PYAC+V+V +K + + I I VE++SQK I+IG
Sbjct: 182 PARFFVTEIIREKILLYYNKEIPYACEVSVERFKEQEKSIH-INAIIYVERDSQKGIIIG 240
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK ++T AR ++E F QK ++LE+ VKV ++WR ++ L YGY
Sbjct: 241 HQGIALKKVSTEARKEMERFFQKNIFLELFVKVDKDWRNNDRRLNAYGY 289
>gi|260589683|ref|ZP_05855596.1| GTP-binding protein Era [Blautia hansenii DSM 20583]
gi|331083115|ref|ZP_08332232.1| GTP-binding protein Era [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539923|gb|EEX20492.1| GTP-binding protein Era [Blautia hansenii DSM 20583]
gi|330405117|gb|EGG84654.1| GTP-binding protein Era [Lachnospiraceae bacterium 6_1_63FAA]
Length = 301
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 180/294 (61%), Gaps = 14/294 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I + KPQTTR++I + +G + Q++ DTPGI + K
Sbjct: 11 AIIGRPNVGKSTLMNHLIGQKIAITSRKPQTTRNKIQTVYTGEKGQIVFLDTPGIHKAK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK---APER-IDEILEEGVGDHKDKLPILLVLN 230
+ L M+ + +AD I+ LV+ A ER I E L+ KLP++LV+N
Sbjct: 70 NKLGEYMVNVAQRTFKDADVILWLVEPTSYIGAGERHIAEQLKNC------KLPVILVIN 123
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D +K EIA ++ Y K + +++P SA ++ + D I LP GP +Y +D +
Sbjct: 124 KVDTVKKSEIAGFIDGYRKLYNFSDIVPASALRAQNLDTVLDCIFKYLPYGPMFYDEDTI 183
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQK 348
++ P+R V E+IREK E+P+ V + K R T KD + ++ I+ E++S K
Sbjct: 184 TDQPQRQIVAEMIREKALRTLDEEIPHGIAVTIDQMKER-TDKDLVDIDATIICERDSHK 242
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + +AAR +IE FL+K V L++ VKVK++WR + L+K++GY
Sbjct: 243 GIIIGKQGAMLKKIGSAARYEIEHFLEKPVNLKLWVKVKKDWRDSDFLIKNFGY 296
>gi|117619280|ref|YP_855344.1| GTP-binding protein Era [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560687|gb|ABK37635.1| GTP-binding protein Era [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 299
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 170/290 (58%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRILGI + YQ I DTPG+ ++
Sbjct: 11 AIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEENYQTIYVDTPGLHIEEK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ + +V +VD + + +L G H K P++L +NK D
Sbjct: 71 RAINRLMNRAATSSLGDVAMVVFMVDGTHWTKDDEMVL--GKLRHL-KCPVVLAVNKIDN 127
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K E + LEW + + ++P+SA+ G VE IR+W LP ++P+D V++
Sbjct: 128 VKEKEDLLPHLEWLGQQMNFAHILPISAEKGTNVEKIREWAKDLLPENVHFFPEDYVTDR 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ E+PY+ V + +K I I+VE++ QK ++IG
Sbjct: 188 SSRFMASEIIREKLMRFTGEELPYSVTVEIERFKVEENGLYHIHGLILVERDGQKKMVIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ +K + T ARLD+E Q KV+LE+ VKVK W DE L+ GYG
Sbjct: 248 NKGEKIKTIGTEARLDMERLFQNKVHLELWVKVKSGWADDERALRSLGYG 297
>gi|452991315|emb|CCQ97375.1| GTP-binding protein [Clostridium ultunense Esp]
Length = 308
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 179/291 (61%), Gaps = 8/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IG+K+SI+++KPQTTR++I + + PE+Q++ DTPGI K
Sbjct: 22 TVIGRPNVGKSTLLNYIIGEKISIISDKPQTTRNKIQLVYTEPEFQIVFLDTPGIQMPK- 80
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKLPILLVLNKKD 233
+ L M+K R D + +VD ++D ILEE G + P++L++NK D
Sbjct: 81 NKLGEYMLKISRETLEEVDIVTFMVDESLETGKLDSYILEELKGL---RTPVILLINKID 137
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
I E + + Y++ +E+IP+SA G + D I LP GP Y+P+D++++
Sbjct: 138 KISKEETNQLILRYKEMNMFEEIIPISAIDGENINAYIDSIKELLPEGPQYFPEDMITDQ 197
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PE+F + EIIREK + EVP+ V++ K R K+ I V I E+ S K I+
Sbjct: 198 PEKFIISEIIREKALENLQEEVPHGIFVSIEEIKER-EGKELIDVHATIYCERESHKGII 256
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGKGG+ LK + AR+D+E L +V L++ VKV++NWR+ EG ++++GY
Sbjct: 257 IGKGGRMLKSIGKNARIDLEKLLGSQVNLQLWVKVEKNWREKEGKVRYFGY 307
>gi|323499982|ref|ZP_08104938.1| GTPase Era [Vibrio sinaloensis DSM 21326]
gi|323314948|gb|EGA68003.1| GTPase Era [Vibrio sinaloensis DSM 21326]
Length = 325
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 186/335 (55%), Gaps = 18/335 (5%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD + F S SE+ SP++ H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFDIDAFFSSGSEQA----TSPEN---------QHCGFVAIVGRPNVGKSTLLN 49
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
+++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 50 RILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSL 109
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYE 248
+ + + LVD + +L + K P++L +NK D ++ ++ +
Sbjct: 110 SDVNLVFFLVDGTHWTNDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNDVMLHMMEMS 166
Query: 249 KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIF 308
K D +V+P+SAK+G ++ +R + LP ++P++ V++ +RF EI+REK+
Sbjct: 167 KKMDFVDVVPISAKHGKNIDVLRKHVRDHLPKATHHFPEEYVTDRSQRFMASEIVREKLM 226
Query: 309 MQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAAR 367
E+PY+ V + + P F I I+VE+N QK ++IGKGG+ +K + AR
Sbjct: 227 RFTGEELPYSVTVEIERFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREAR 286
Query: 368 LDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 287 LDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 321
>gi|238019235|ref|ZP_04599661.1| hypothetical protein VEIDISOL_01099 [Veillonella dispar ATCC 17748]
gi|237863934|gb|EEP65224.1| hypothetical protein VEIDISOL_01099 [Veillonella dispar ATCC 17748]
Length = 299
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+ + K
Sbjct: 13 AVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDEAKQIVFMDTPGVHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 72 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVVNKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K E+ + + Y+ VIP+SAK + ++ + + LP GP Y+P+D++++ P
Sbjct: 130 LKKEELLEAIVSYQDAYPFAGVIPISAKDKENLNEVLNVLEETLPEGPQYFPEDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK I+IGK
Sbjct: 190 ERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK L AR+DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 250 KGALLKQLGAEARVDIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGY 297
>gi|261253899|ref|ZP_05946472.1| GTP-binding protein Era [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954581|ref|ZP_12597614.1| GTPase Era [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260937290|gb|EEX93279.1| GTP-binding protein Era [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342815127|gb|EGU50054.1| GTPase Era [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 325
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 186/335 (55%), Gaps = 18/335 (5%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD + F S E+ SP++ H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFDIDAFFSSGGEQA----TSPEN---------QHCGFVAIVGRPNVGKSTLLN 49
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
+++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 50 RILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSL 109
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYE 248
+ + + LVD + +L + K P++L +NK D+++ ++ ++
Sbjct: 110 SDVNLVFFLVDGTHWTADDEMVLTKL---QKSNFPVVLCVNKVDVVQDRNDVMMHMQEMS 166
Query: 249 KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIF 308
D +V+P+SAK+G ++ +R + LP ++P++ V++ +RF EI+REK+
Sbjct: 167 SKMDFVDVVPISAKHGKNIDVLRKHVREHLPKATHHFPEEYVTDRSQRFMASEIVREKLM 226
Query: 309 MQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAAR 367
E+PY+ V + + P F I I+VE+N QK ++IGKGG+ +K + AR
Sbjct: 227 RFTGEELPYSVTVEIERFDYNPDTDGFHINALILVERNGQKKMVIGKGGEKIKTIGREAR 286
Query: 368 LDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 287 LDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 321
>gi|373455525|ref|ZP_09547356.1| GTP-binding protein Era [Dialister succinatiphilus YIT 11850]
gi|371934787|gb|EHO62565.1| GTP-binding protein Era [Dialister succinatiphilus YIT 11850]
Length = 302
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 180/301 (59%), Gaps = 19/301 (6%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKSTL N ++G+K+SIV+ QTTR++I G+ +G Q++ DTPG+
Sbjct: 9 HSGFAALLGRPNVGKSTLMNALLGEKISIVSAHAQTTRNKITGVWNGDNAQVVFLDTPGM 68
Query: 170 IEKKIHMLDSMMMKNVRSAGINA-DCIVVLVDACKAPERIDEILEEGVGDH------KD- 221
H S + + +R + ++A D + ++V C + + G GD KD
Sbjct: 69 -----HKPQSKLGEAIRQSTMDALDEVDMIVFLCAVNDPL------GAGDRYILSLLKDR 117
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
K+P++L L+K DLI E+ KK+ Y K E+IP+SAK G ++++ ++ +P G
Sbjct: 118 KVPVILALSKTDLISKEEVLKKIVQYSKIYPFAEIIPLSAKTGENLDELMKCVVKYMPEG 177
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 341
P Y+P D+V++ PER V EI+REK+ + R+EVP+A V + R K +I+ I
Sbjct: 178 PKYFPDDMVTDQPERNIVQEIVREKLLTRTRDEVPHAIGVYTEEFSERENGKVYIRCTIY 237
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
VE++SQK I+IGK G LK AR +I++ + V+L++ VKV ++W+ + +L+ G
Sbjct: 238 VERDSQKRIIIGKKGSVLKAAGQEAREEIQNLIGAPVFLDLWVKVTKDWKNKDYILRELG 297
Query: 402 Y 402
Y
Sbjct: 298 Y 298
>gi|399046967|ref|ZP_10739155.1| GTP-binding protein Era [Brevibacillus sp. CF112]
gi|433545480|ref|ZP_20501833.1| GTP-binding protein [Brevibacillus agri BAB-2500]
gi|398055117|gb|EJL47209.1| GTP-binding protein Era [Brevibacillus sp. CF112]
gi|432183135|gb|ELK40683.1| GTP-binding protein [Brevibacillus agri BAB-2500]
Length = 305
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 176/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++G K++I++NKPQTTR++I + + + Q+I DTPGI K
Sbjct: 16 SIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEDGQIIFLDTPGI-HKPQ 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L + M+ + D ++ +VDA + D+ + E + + K P+ LV+NK D
Sbjct: 75 SKLGNYMVSVAENTLNEVDLVLFVVDATEKRGAGDDYIIERL--KQVKTPVFLVINKIDK 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++ Y K D +++P+SA G+ + + I+ ++ GP +YP D V++HP
Sbjct: 133 VHPEALLPIIDDYRKLYDFKQIVPISALQGNNTSSLTEAIMGEMEEGPMFYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R EVP++ V V K K +I I VE++SQ+ ILIG
Sbjct: 193 ERFVVAELIREKVLHLTREEVPHSIAVVVEEMKRGENGKTLYIYAAIYVERDSQRGILIG 252
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ G+ LK + AR DIE + +V+LE+ +KVK++WR E +L+++G+
Sbjct: 253 QKGQMLKEIGRRARKDIERLMGDQVFLELWIKVKKDWRNQERMLRNFGF 301
>gi|387783710|ref|YP_006069793.1| GTP-binding protein [Streptococcus salivarius JIM8777]
gi|338744592|emb|CCB94958.1| GTP-binding protein [Streptococcus salivarius JIM8777]
Length = 299
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++E + D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIEDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDEMKRDEDTDKIHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGSMLKKIGTLARKDIEVMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|421499224|ref|ZP_15946279.1| era [Aeromonas media WS]
gi|407181750|gb|EKE55752.1| era [Aeromonas media WS]
Length = 301
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 170/290 (58%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRILGI + YQ I DTPG+ ++
Sbjct: 13 AIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEDNYQTIYVDTPGLHIEEK 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ + +V +VD + + +L G H K P++L +NK D
Sbjct: 73 RAINRLMNRAATSSLGDVAMVVFMVDGTHWTKDDEMVL--GKLRHL-KCPVVLAVNKIDN 129
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K E + LEW + + ++P+SA+ G VE IR+W LP ++P+D V++
Sbjct: 130 VKEKEDLLPHLEWLGQQMNFAHILPISAEKGTNVEKIREWAKPLLPENVHFFPEDYVTDR 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ E+PY+ V + +K I I+VE++ QK ++IG
Sbjct: 190 SSRFMASEIIREKLMRFTGEELPYSVTVEIERFKVEENGLYHIHGLILVERDGQKKMVIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ +K + T ARLD+E Q KV+LE+ VKVK W DE L+ GYG
Sbjct: 250 NKGEKIKTIGTEARLDMERLFQNKVHLELWVKVKSGWADDERALRSLGYG 299
>gi|449994625|ref|ZP_21822618.1| GTP-binding protein Era [Streptococcus mutans A9]
gi|449185131|gb|EMB87033.1| GTP-binding protein Era [Streptococcus mutans A9]
Length = 299
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMACDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGY 294
>gi|322385835|ref|ZP_08059478.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100]
gi|417922582|ref|ZP_12566070.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100]
gi|321270120|gb|EFX53037.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100]
gi|342832679|gb|EGU66974.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100]
Length = 299
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK+ I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIVIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M++ S D ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L K++LE VKVK+NWR + L +GY
Sbjct: 246 KGGSMLKKIGSMARRDIELMLGDKIFLETWVKVKKNWRDKKLDLADFGY 294
>gi|290769994|gb|ADD61761.1| putative protein [uncultured organism]
Length = 322
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 174/295 (58%), Gaps = 14/295 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+ +G+PNVGKSTL NQ+IGQK++I +NKPQTTR+RI + + Q++ DTPGI + K
Sbjct: 29 TFIGRPNVGKSTLMNQIIGQKIAITSNKPQTTRNRIQTVYTDERGQIVFVDTPGIHKAK- 87
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDHKDKLPILLVLN 230
+ L M+ D I LV+ A E I E L+E K PI+LV+N
Sbjct: 88 NKLGEYMVGAAEKTISEVDLICWLVEPTTHLGAAEEHIVEKLKEC------KTPIVLVIN 141
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D IK EI ++ Y K D +++PV A+ G+ V+D+ D I + L GP YY +D V
Sbjct: 142 KTDTIKKEEILPVIDCYRKELDFVDIVPVCARNGNNVDDLLDVIFSHLDYGPMYYDEDTV 201
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK---DFIQVEIVVEKNSQ 347
++ P + V E+IREK +E+P+ V + S+K R A+ I I+ E++S
Sbjct: 202 TDQPMKQIVAELIREKALHALNDEIPHGIAVVIDSFKERRNARGPITDIDATIICERDSH 261
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGG+ LK + T AR +IE L KV L++ VKVK+ WR + LLK++GY
Sbjct: 262 KGIIIGKGGEMLKKIGTNARYEIEKQLDMKVNLKLWVKVKKEWRDSDILLKNFGY 316
>gi|22297600|ref|NP_680847.1| GTP-binding protein Era [Thermosynechococcus elongatus BP-1]
gi|22293777|dbj|BAC07609.1| tlr0056 [Thermosynechococcus elongatus BP-1]
Length = 307
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 168/290 (57%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I + QTTR+R+ GI + Q I DTPGI K
Sbjct: 20 ALVGRPNVGKSTLFNHLLGQKVAITSPVAQTTRNRLRGILTTATAQFIFVDTPGI-HKPH 78
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L +++ N + D IV +VDA P R D + + + P+L+ +NK DL
Sbjct: 79 HRLGEVLVHNAKGVLKRVDAIVFVVDAASPPGRGDRYVADLLTT--TPAPVLMAINKIDL 136
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + Y+ P SA G GV ++ I +LPLGP YYP D+V++ P
Sbjct: 137 LPPEAREQRQQDYQTLGPWP-AYPCSALTGEGVGLLQSAIAAQLPLGPYYYPPDMVTDQP 195
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV--VEKNSQKIILI 352
ERF + E+IRE+I R EVP++ V + + ++ +V V VE+ +QK I+I
Sbjct: 196 ERFIMAELIREQILHHTREEVPHSVAVTIEQVQQE---RNLTRVHAVIYVERPTQKAIII 252
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+GG+ LK + TAAR +IE + K+YLE+ VKV+ WRQD L GY
Sbjct: 253 GQGGQLLKQIGTAARQEIETLIGGKIYLELFVKVRPRWRQDRLRLAELGY 302
>gi|153810738|ref|ZP_01963406.1| hypothetical protein RUMOBE_01122 [Ruminococcus obeum ATCC 29174]
gi|149833134|gb|EDM88216.1| ribosome biogenesis GTPase Era [Ruminococcus obeum ATCC 29174]
Length = 302
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 174/293 (59%), Gaps = 11/293 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I + KPQTTR+RI + + + Q++ DTPGI + K
Sbjct: 11 AIIGRPNVGKSTLMNHLIGQKIAITSKKPQTTRNRIQTVYTCEDGQIVFLDTPGIHKAK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILEEGVGDHKDKLPILLVLNK 231
+ L M++ + D I+ LV+ A ER I E+ G H LP++LV+NK
Sbjct: 70 NKLGEYMVQVAERTLKDVDVILWLVEPTTFIGAGER--HIAEQLKGLH---LPVILVINK 124
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + EI K ++ Y K D DE+IP SA EDI IL LP GP +Y +D V+
Sbjct: 125 VDTVDKDEILKAIDTYRKLYDFDEIIPCSALRNQNTEDIIPCILKYLPYGPMFYDEDTVT 184
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKI 349
+ P+R EIIREK E+P+ V + + K RP + + +E I+ E++S K
Sbjct: 185 DQPQRQIAAEIIREKALHALDAEIPHGIAVAIDTMKERPGKRQLVDIEATIICERDSHKG 244
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + + AR ++E L KV L++ VKV+++WR + ++K++GY
Sbjct: 245 IIIGKQGAMLKKIGSNARYELEQMLDAKVNLKLWVKVRKDWRDSDFMIKNFGY 297
>gi|89075087|ref|ZP_01161528.1| GTP-binding protein Era [Photobacterium sp. SKA34]
gi|90580326|ref|ZP_01236133.1| GTP-binding protein Era [Photobacterium angustum S14]
gi|89049174|gb|EAR54739.1| GTP-binding protein Era [Photobacterium sp. SKA34]
gi|90438628|gb|EAS63812.1| GTP-binding protein Era [Vibrio angustum S14]
Length = 301
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 176/302 (58%), Gaps = 19/302 (6%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ + DTPG+
Sbjct: 6 HCGFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVYVDTPGL 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
++ ++ +M + S+ + + ++ LVD + +L + K +LP +L++
Sbjct: 66 HIEEKRTINRLMNRAASSSLTDVELVLFLVDGTMWTADDEMVLNKLA---KSQLPTVLLV 122
Query: 230 NKKDLIKPG--------EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
NK D +K E+A K+E+ +VIPVSAK+G ++ + + LP
Sbjct: 123 NKVDNVKDKHELFPHLQELASKMEFV-------DVIPVSAKHGTNIDAVEKIVRQHLPEC 175
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEI 340
Y+P++ V++ +RF EIIREK+ +E+PYA V + + P F I I
Sbjct: 176 EYYFPEEYVTDRSQRFMASEIIREKLMRFTGDELPYAVTVEIERFDYNPETDGFDINGLI 235
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
+VE+ QK ++IGKGG +K++ ARLD+ED ++KVYLE+ VKVK W DE L+
Sbjct: 236 LVERKGQKKMVIGKGGDKIKVIGREARLDMEDLFERKVYLELWVKVKSGWADDERALRSL 295
Query: 401 GY 402
GY
Sbjct: 296 GY 297
>gi|417092556|ref|ZP_11957172.1| GTP-binding protein Era [Streptococcus suis R61]
gi|353532235|gb|EHC01907.1| GTP-binding protein Era [Streptococcus suis R61]
Length = 299
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + E Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEGQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + + D E++P+SA G+ V + + + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRQQMDFKEIVPISATQGNNVNRLMEILKENLDEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVIESMKRDGFTDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|427414153|ref|ZP_18904343.1| GTP-binding protein Era [Veillonella ratti ACS-216-V-Col6b]
gi|425714529|gb|EKU77532.1| GTP-binding protein Era [Veillonella ratti ACS-216-V-Col6b]
Length = 298
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IG K+ IV++K QTTR+RI+ + + Q++ DTPGI + K
Sbjct: 13 AVVGRPNVGKSTLINALIGDKIVIVSDKAQTTRNRIVCVYMDEKKQIVFMDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K + + ++ LV + D + E + + +P+ LV+NK D
Sbjct: 72 HKLGEFMVKAAVDSLKEVEAVLFLVAGNEKRGPGDNFIIEQLKNVD--VPVFLVINKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +I + + Y+ + +IP+SA + ++ D + LP GP Y+P+D++++ P
Sbjct: 130 LAKEQILETIVEYQNLYPFEGIIPISALEKDNIHEVLDVLEQVLPEGPQYFPEDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI ++ R E+P+A V+V K RP +I+ I E++SQK I+IGK
Sbjct: 190 ERLIIADIVREKILLKTREEIPHAIAVDVDEMKQRPDGTTYIRATIYCERDSQKGIIIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G L+ L AR D+E L KVYL++ VKVK++WR G+L +GY
Sbjct: 250 KGNMLRELGAEARTDVERLLATKVYLDLWVKVKKDWRNKSGMLSEFGY 297
>gi|392988992|ref|YP_006487585.1| GTP-binding protein Era [Enterococcus hirae ATCC 9790]
gi|392336412|gb|AFM70694.1| GTP-binding protein Era [Enterococcus hirae ATCC 9790]
Length = 299
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 190/295 (64%), Gaps = 9/295 (3%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DTPG
Sbjct: 4 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDTPG 63
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
I + K H L M+++ SA D ++ ++ A + R D+ + E + + + P+ L+
Sbjct: 64 IHKPK-HRLGDFMVESAYSALREVDAVLFMISADQKRGRGDDFIIERLKNVQS--PVYLI 120
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D + P E+ +E Y +V+P+SA G+ V+ + + ++ ++P GP Y+P D
Sbjct: 121 INKIDKVHPDELLGIIEDYSAQMPFAQVVPISATEGNNVDRLMEVLIAEMPEGPQYFPDD 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV-SYKTRPTAKDFIQVEIVVEKNSQ 347
V++HPE F V E+IREK+ R+EVP++ V VV S K K IQ I+VE++SQ
Sbjct: 181 QVTDHPEYFIVSELIREKVLFLTRDEVPHSVAV-VVDSMKRNENDKIQIQATIIVERDSQ 239
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGGK LK + T AR DIE+ L KV+LE+ VKV+++WR L+ +GY
Sbjct: 240 KGIIIGKGGKMLKEIGTKARKDIENLLGDKVFLELWVKVQKDWRDKRVYLQDFGY 294
>gi|313888957|ref|ZP_07822617.1| ribosome biogenesis GTPase Era [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845130|gb|EFR32531.1| ribosome biogenesis GTPase Era [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 301
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 174/289 (60%), Gaps = 2/289 (0%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PNVGKSTL N +IG+K+S +++KPQTTR I I + + Q+I DTPGI +K
Sbjct: 12 SVIGRPNVGKSTLLNAIIGEKISAISSKPQTTRQNITFIHTDEDAQIIFLDTPGI-QKPK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+ + ++D I +VD K R + + + + ++K KLPI+L++NK D
Sbjct: 71 NKLGEFMLTESKEGIEDSDVITYIVDTSKKIGRAERSIIDILKEYKGKLPIILLINKVDT 130
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I+ E+ + + Y + D++IP+SA GV+ + + L GP YYP+D++++
Sbjct: 131 IRKDELLEIISMYAEEEIFDDIIPISAMKNDGVDIYLETLKKFLKPGPMYYPEDMITDKN 190
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
ERF V EIIREK + EVP+ +++ +K R + I I VE+++ K ILIG
Sbjct: 191 ERFIVAEIIREKGLIYLNEEVPHGLAISIEKFKKREDKNMYDIDANIYVERDTHKGILIG 250
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + T AR + E L KV L+I VKV++NWR + L+K +GY
Sbjct: 251 KNGSMLKRIGTEAREEAERLLDAKVNLQIWVKVEKNWRDRDNLVKRFGY 299
>gi|428300542|ref|YP_007138848.1| GTP-binding protein Era-like-protein [Calothrix sp. PCC 6303]
gi|428237086|gb|AFZ02876.1| GTP-binding protein Era-like-protein [Calothrix sp. PCC 6303]
Length = 325
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 185/317 (58%), Gaps = 16/317 (5%)
Query: 93 NMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILG 152
N P+D I + ++G+PNVGKSTL N+++GQK++I + QTTR+R+ G
Sbjct: 14 NFLYPEDVMIPQAPPEFKSGFVGIVGRPNVGKSTLMNRLVGQKIAITSPIAQTTRNRLRG 73
Query: 153 ICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPER-I 208
I + P Q+I DTPG I K H L ++++N ++A + D I+ +VDA C +R +
Sbjct: 74 ILTTPAAQIIFVDTPG-IHKPHHQLGEVLVQNAKAAIESVDLILFVVDASTVCGGGDRYV 132
Query: 209 DEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKL-EWYEKFTDVD--EVIPVSAKYGH 265
E+L +K + P++L LNK D +P E A K+ E Y + + +++ SA G
Sbjct: 133 AELL------NKSQTPVILGLNKTDQ-QPPESADKIDESYTQLASTNNWKIVKFSAITGE 185
Query: 266 GVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVS 325
+ ++D ++ KL GP YYP D+V++ PERF +GE+IRE+I + R EVP++ + +
Sbjct: 186 ELPQLQDLLIEKLETGPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDQ 245
Query: 326 YKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVK 385
+ P+ + I VE++SQK ILIGKGG LK + ++AR I+ + KVYLE+ VK
Sbjct: 246 VEETPSITRVL-ATINVERDSQKGILIGKGGLMLKTIGSSAREQIQKLIAGKVYLELFVK 304
Query: 386 VKENWRQDEGLLKHYGY 402
V+ WR L GY
Sbjct: 305 VQPKWRHSRIRLADLGY 321
>gi|325280072|ref|YP_004252614.1| GTP-binding protein Era-like-protein [Odoribacter splanchnicus DSM
20712]
gi|324311881|gb|ADY32434.1| GTP-binding protein Era-like-protein [Odoribacter splanchnicus DSM
20712]
Length = 304
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 184/302 (60%), Gaps = 10/302 (3%)
Query: 109 SHPN-HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 163
S PN HK+ ++G PNVGKSTL N+++G+K+SI+T+K QTTRHRI GI + +YQ++
Sbjct: 8 SKPNMHKAGFVNIVGNPNVGKSTLMNRLVGEKISIITSKSQTTRHRIKGIVNTDDYQIVF 67
Query: 164 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 223
DTPG++ K + + M++ +SA ++AD I+ + D + E+ + +++ +K +
Sbjct: 68 SDTPGVV-KPSYKMQEYMLEFSKSALVDADIILYVTDVVENIEKNLDFIDKV---NKSDI 123
Query: 224 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 283
P+LLV+NK DL ++ + ++ E+ P+SA V+++ I+ LP G
Sbjct: 124 PVLLVINKIDLTTQEKLEALFDKWKSLIPRAEIFPLSATENFNVDNLYKRIVELLPEGEP 183
Query: 284 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 343
++PKD +++ P RFFV EIIREKI +QY ++ V + I I VE
Sbjct: 184 FFPKDELTDLPSRFFVNEIIREKI-LQYYDKEVPYSVEVEVEEFKEDDKRINIMAVIYVE 242
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
++SQK I+IG G+ALK + T ARLDIE F KKV+L + VKV ++WR + LK++GY
Sbjct: 243 RSSQKGIIIGSQGEALKKVGTQARLDIEAFFGKKVFLNLYVKVLKDWRNKDSELKNFGYA 302
Query: 404 GQ 405
+
Sbjct: 303 NK 304
>gi|386585717|ref|YP_006082119.1| GTP-binding protein Era [Streptococcus suis D12]
gi|353737863|gb|AER18871.1| GTP-binding protein Era [Streptococcus suis D12]
Length = 299
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 182/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + E Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + + + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRHQMDFKEIVPISATQGNNVNRLMEILKENLDEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVIESMKRDEFTDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|226311653|ref|YP_002771547.1| GTP-binding protein [Brevibacillus brevis NBRC 100599]
gi|226094601|dbj|BAH43043.1| probable GTP-binding protein [Brevibacillus brevis NBRC 100599]
Length = 305
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 175/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++G K++I++NKPQTTR++I + + E Q+I DTPGI K
Sbjct: 16 SIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEEGQIIFLDTPGI-HKPQ 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
L + M+ + D ++ +VDA + D+ + E + + K P+ LV+NK D
Sbjct: 75 SKLGNYMVSVAENTLNEVDLVLFVVDATEKRGAGDDYIIERL--KQVKTPVFLVINKIDK 132
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P + ++ Y K D +++P+SA G+ ++ IL ++ GP YYP D V++HP
Sbjct: 133 VHPEALLPIIDDYRKLYDFKQIVPISALEGNNTASLQQAILGEMEEGPMYYPADQVTDHP 192
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQKIILIG 353
ERF E+IREK+ R EVP++ V + K K +I I VE++SQ+ ILIG
Sbjct: 193 ERFVAAELIREKVLHLTREEVPHSIAVVIEEMKRGENGKTLYIYAAIYVERDSQRGILIG 252
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ G+ LK + AR DIE + +V+LE+ +KVK++WR + +L+++G+
Sbjct: 253 QKGQMLKEIGQRARKDIERLMGDQVFLELWIKVKKDWRNQDRMLRNFGF 301
>gi|317051559|ref|YP_004112675.1| GTP-binding protein Era [Desulfurispirillum indicum S5]
gi|316946643|gb|ADU66119.1| GTP-binding protein Era [Desulfurispirillum indicum S5]
Length = 300
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 182/294 (61%), Gaps = 4/294 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++G+PNVGKSTL +IG+K+SI+++KPQTTR+RI+G+ G ++Q++ DTPG+ + K
Sbjct: 9 GIVGRPNVGKSTLMGAIIGEKISIISDKPQTTRNRIMGVWHGDDFQVVFLDTPGVHKGK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK-APERIDEILEEGVGDHKDKLPILLVLNKKD 233
+ ++ M+ S D ++++V+ + + + +L E H++ P+ LV+NK D
Sbjct: 68 YGINDFMLNTAFSVLSEVDILLLVVEYWETGGQEFNLLLGELRSRHRELPPVFLVVNKID 127
Query: 234 LIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
L + EI + + + D +IPVSA G ++ ++ I+ ++ GP Y+P+D++++
Sbjct: 128 LAEDKHEILESIARQKDLFDFAGIIPVSALNGENLDRLKALIVEQMEEGPRYFPEDMITD 187
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
ERF V E IREK+F+ R+E+P++ V V + T + I I VE++SQK ++I
Sbjct: 188 QSERFLVAEFIREKVFVLTRDEIPHSIAVQVEQFVTEEN-RLVISACIYVERDSQKGMII 246
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQI 406
GK G +K + + AR+D+E L KV+LE+ VKV +WR+ L+ +GY Q+
Sbjct: 247 GKRGAMIKEIGSQARVDLERMLGTKVFLELHVKVSRDWRKTSARLREFGYTEQV 300
>gi|51245541|ref|YP_065425.1| GTP-binding protein Era-like protein [Desulfotalea psychrophila
LSv54]
gi|50876578|emb|CAG36418.1| probable GTP-binding protein Era homolog [Desulfotalea psychrophila
LSv54]
Length = 313
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 179/292 (61%), Gaps = 5/292 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PN GKSTL NQ++GQK+SIVT+KPQTTR+RILGI + YQ++L DTPG+ K
Sbjct: 23 AIVGPPNAGKSTLMNQLLGQKISIVTSKPQTTRNRILGIVNDDAYQIVLLDTPGL-HKAD 81
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKA--PERIDEILEEGVG-DHKDKLPILLVLNK 231
L+ MM+ + D ++ LVD P+ + + EE G K + P +LVLNK
Sbjct: 82 EPLNIEMMRVALESLSEVDAVLFLVDVSLPLPPKALAKQREELAGYMEKIESPAILVLNK 141
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
DLI ++ +E Y K V+P+SA G G +++ IL +P+GP Y+P+DI +
Sbjct: 142 VDLIDKQKLLPMIESYAKLFPFKAVVPISALNGDGADNLLKEILELIPVGPRYFPEDIPT 201
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKII 350
+ ERF EI+REK+F+ E+PY+ V S+K K I IVVE+ SQK +
Sbjct: 202 DATERFLAAEIVREKVFLLTGQELPYSAATLVESFKEDEQKKLITIHATIVVERPSQKGM 261
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+IGKGG+ LK + TAAR DIE L KV L++ VKVK+ W +DE LK G+
Sbjct: 262 IIGKGGQKLKQIGTAARKDIEALLGSKVLLKLWVKVKKKWAEDENFLKELGF 313
>gi|388602699|ref|ZP_10161095.1| GTPase Era [Vibrio campbellii DS40M4]
gi|444426169|ref|ZP_21221593.1| GTPase Era [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444240582|gb|ELU52120.1| GTPase Era [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 320
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 186/319 (58%), Gaps = 16/319 (5%)
Query: 96 SPDDYEIEEFDYASH-----PNHK-----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQT 145
+ ++++I+ F +ASH P ++ +++G+PNVGKSTL N+++GQK+SI + KPQT
Sbjct: 2 ADNEFDIDAF-FASHGEVSSPENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQT 60
Query: 146 TRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP 205
TRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + + LVD
Sbjct: 61 TRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLVDGTHWT 120
Query: 206 ERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYG 264
+ +L + K P++L +NK D ++ E+ + K D +V+P+SAK+G
Sbjct: 121 NDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMLHMMDMSKKMDFVDVVPISAKHG 177
Query: 265 HGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV 324
+E +R + LP ++P++ V++ +RF EI+REK+ +E+PY+ V +
Sbjct: 178 KNIEVLRKHVRDHLPKATHHFPEEYVTDRSQRFMASEIVREKLMRFTGDELPYSVTVEIE 237
Query: 325 SYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIE 383
+ P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+ +KVYLE
Sbjct: 238 RFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEELFGRKVYLETW 297
Query: 384 VKVKENWRQDEGLLKHYGY 402
VKVK W DE L+ GY
Sbjct: 298 VKVKSGWADDERALRSLGY 316
>gi|320547277|ref|ZP_08041569.1| GTP-binding protein Era [Streptococcus equinus ATCC 9812]
gi|320448081|gb|EFW88832.1| GTP-binding protein Era [Streptococcus equinus ATCC 9812]
Length = 298
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLINILKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKILKLTEQEVPHSVAVIVDSMKRDPETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KKGAMLKKIGKMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|34541717|ref|NP_906196.1| GTP-binding protein Era [Porphyromonas gingivalis W83]
gi|419969673|ref|ZP_14485201.1| GTP-binding protein Era [Porphyromonas gingivalis W50]
gi|34398035|gb|AAQ67095.1| GTP-binding protein Era [Porphyromonas gingivalis W83]
gi|392612104|gb|EIW94817.1| GTP-binding protein Era [Porphyromonas gingivalis W50]
Length = 299
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 178/288 (61%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DTPG++
Sbjct: 14 NIVGNPNVGKSTLINLLVGERISIITSKAQTTRHRIMGIVNTPEMQIVYSDTPGVLRPN- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M + SA +AD +V + D + ++ + L + + P+LLV+NK DL
Sbjct: 73 YKLQQEMREFSESALGDADVLVYVTDVVEKADKNADFLARV---SRMECPVLLVINKIDL 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + +E + E+ P+SA V ++ I + +P P Y+ KD +++ P
Sbjct: 130 SNQEALEQLVEEWRNILPKAEIHPLSATNNFNVGLLQKRIESLIPPSPPYFEKDALTDKP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y+ E+PYA +V V +K T I+ I+VE+NSQK I+IG
Sbjct: 190 ARFFVTEIIREKILLYYQKEIPYAAEVVVEEFKEEKTIIR-IKSLIIVERNSQKGIIIGP 248
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G A+K + + AR D+E F KK++LEI VKV+++WR + LL+ +GY
Sbjct: 249 KGAAIKRVGSMARRDLERFFGKKIFLEIFVKVEKDWRNRDNLLRAFGY 296
>gi|300726753|ref|ZP_07060183.1| GTP-binding protein Era [Prevotella bryantii B14]
gi|299775866|gb|EFI72446.1| GTP-binding protein Era [Prevotella bryantii B14]
Length = 293
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 174/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNDDDCQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
M MM+ SA +AD ++ + D ++PE+ + L++ K +P+LLV+NK D
Sbjct: 68 KM-QEMMLAFSESALADADVLLYVTDVIESPEKNQDFLDKV---KKMTIPVLLVINKIDE 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ +E + E++P+SAK GV+ + I LP P Y+ KD +++ P
Sbjct: 124 SNQKLLGDIVEKWHGLLPNAEILPISAKNKFGVDMLMKRIKELLPDSPPYFDKDQLTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
+FFV EIIREKI + Y E+PY+ +V V +K + I I VE++SQK I+IG
Sbjct: 184 AKFFVSEIIREKILLYYDKEIPYSVEVVVERFK-EDEKRIHINAVIYVERDSQKGIIIGH 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK +++ AR +E F K+V+LE VKV ++WR + L +GY
Sbjct: 243 QGVALKKVSSEARKTLEKFFDKRVFLETFVKVDKDWRNSQRELDSFGYN 291
>gi|149192068|ref|ZP_01870293.1| GTP-binding protein Era [Vibrio shilonii AK1]
gi|148834093|gb|EDL51105.1| GTP-binding protein Era [Vibrio shilonii AK1]
Length = 329
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 174/300 (58%), Gaps = 5/300 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N ++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+
Sbjct: 31 HCGFVAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGL 90
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
++ ++ +M + S+ + + ++ LVD + + +L + K P++L +
Sbjct: 91 HIEEKRAINRLMNRAANSSLSDVNLVLFLVDGTHWTDDDEMVLNKL---RKSDFPVILCM 147
Query: 230 NKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D +K ++ + K D +V+P+SAK+G + +R + LP ++P++
Sbjct: 148 NKVDNVKDRNDVMLHMHELSKKMDFVDVVPISAKHGKNTDVLRKHVREHLPEAVHHFPEE 207
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 347
V++ +RF EI+REK+ +E+PY+ V + + P F I I+VE+N Q
Sbjct: 208 YVTDRSQRFMASEILREKLMRFTGDELPYSVTVEIERFDYNPDTDGFHINALILVERNGQ 267
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQIQ 407
K ++IGKGG+ +K + ARLD+E+ +KVYLE VKVK W DE L+ GY I+
Sbjct: 268 KKMVIGKGGEKIKTIGREARLDMEELFDRKVYLETWVKVKSGWADDERALRSLGYIDDIE 327
>gi|449919893|ref|ZP_21798206.1| GTP-binding protein Era [Streptococcus mutans 1SM1]
gi|449159084|gb|EMB62463.1| GTP-binding protein Era [Streptococcus mutans 1SM1]
Length = 299
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + + E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMNFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGY 294
>gi|403053131|ref|ZP_10907615.1| GTPase Era [Acinetobacter bereziniae LMG 1003]
gi|445413123|ref|ZP_21433467.1| GTP-binding protein Era [Acinetobacter sp. WC-743]
gi|444765917|gb|ELW90194.1| GTP-binding protein Era [Acinetobacter sp. WC-743]
Length = 342
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 176/301 (58%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 43 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKSQAVFVDTPGMHKKEV 102
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM K SA + + ++ ++DA K + DE++ E + + ++P++L++NK D
Sbjct: 103 RAINKMMNKAAHSALRDVNLVLFVLDAQKWTQN-DELVLEKLKNA--EMPVVLIINKIDT 159
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ + L + K + E++PVSA G ++ +RD I LP P Y D +++
Sbjct: 160 LENKRMVLPLIQERAKLMNFAEIVPVSALRGANLDHLRDAIEKYLPFQPPLYSLDQLTDR 219
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT----------RPTAK-DFIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT RP A +I I V
Sbjct: 220 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATINEKTGRPKAACTYIDATIFV 279
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ QK I+IG+ G LK + AR+D+E ++K+ L + VKVK W DE LK GY
Sbjct: 280 DRPGQKAIVIGEKGAKLKKIGMDARIDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 339
Query: 403 G 403
Sbjct: 340 S 340
>gi|365876585|ref|ZP_09416104.1| GTPase Era [Elizabethkingia anophelis Ag1]
gi|442587084|ref|ZP_21005904.1| GTPase Era [Elizabethkingia anophelis R26]
gi|365755583|gb|EHM97503.1| GTPase Era [Elizabethkingia anophelis Ag1]
gi|442563139|gb|ELR80354.1| GTPase Era [Elizabethkingia anophelis R26]
Length = 291
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 182/289 (62%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + + Q++ DTPG+++ K
Sbjct: 8 NIVGKPNAGKSTLLNQLMGEKLAIVTQKAQTTRHRIFGIYNEDDVQIVFSDTPGVLDPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM+ V+ + +AD + +VD + + ++E+ +K +P+L+++NK D
Sbjct: 67 YGLQEKMMEFVKESLQDADVFLFIVDITDKAQPSEFLIEKL---NKIPVPVLILINKVDK 123
Query: 235 IKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ + + W+E+ E++P+SA + E I + + LP PAYY KD ++
Sbjct: 124 ADQKVLEETVALWHERIPKA-EILPISALNAYNTEYILPKLKSLLPESPAYYDKDQFTDK 182
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERFFV E IREKI + Y E+PY+ +V +K + FI I VE+ +QK ILIG
Sbjct: 183 SERFFVNETIREKILLNYEKEIPYSVEVVTELFKDKGEMI-FIDSIIYVERETQKGILIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+++K + T AR+D+E F KK++L + VKVK++WR+++ LK++GY
Sbjct: 242 HKGESIKKVGTEARMDLEKFFGKKLHLNLFVKVKKDWRKNDRDLKNFGY 290
>gi|343508970|ref|ZP_08746267.1| GTP-binding protein Era [Vibrio scophthalmi LMG 19158]
gi|342806036|gb|EGU41277.1| GTP-binding protein Era [Vibrio scophthalmi LMG 19158]
Length = 326
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 183/335 (54%), Gaps = 17/335 (5%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD + F S EK +SP + H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFDIDAYFASGGEKK---TSSPTN---------QHCGFIAIVGRPNVGKSTLLN 50
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 51 NILGQKISITSRKPQTTRHRIMGVDTEGDYQAIFVDTPGLHIEEKRAINRLMNRAANSSL 110
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYE 248
+ + + LVD + +L + P++L +NK D++ ++ +
Sbjct: 111 SDVNLVFFLVDGTHWTADDEMVLNKL---RNANFPVVLCVNKVDVVNDRNDVMMHMADLS 167
Query: 249 KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIF 308
K D +++P+SAK+G V+ +R + LP ++P++ V++ +RF EI+REK+
Sbjct: 168 KLMDFVDIVPISAKHGKNVDVLRKHVRAHLPKATHHFPEEYVTDRSQRFMASEIVREKLM 227
Query: 309 MQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAAR 367
E+PY+ V + + P F I I+VE++ QK ++IGKGG+ +K + AR
Sbjct: 228 RFTGEELPYSVTVEIERFDYNPDTDGFHINALILVERSGQKKMVIGKGGEKIKTIGREAR 287
Query: 368 LDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 288 LDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 322
>gi|294791925|ref|ZP_06757073.1| GTP-binding protein Era [Veillonella sp. 6_1_27]
gi|294457155|gb|EFG25517.1| GTP-binding protein Era [Veillonella sp. 6_1_27]
Length = 307
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+ + K
Sbjct: 21 AVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDEAKQIVFMDTPGVHKPK- 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 80 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVVNKIDT 137
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K E+ + + Y+ VIP+SAK + +I + LP GP Y+P+D++++ P
Sbjct: 138 LKKEELLEAIVSYQDAYPFAGVIPISAKDKENLSEILKVLEESLPEGPQYFPEDMITDQP 197
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +IIREKI + R+E+P+A V+V KTR +I+ I E++SQK I+IGK
Sbjct: 198 ERLIISDIIREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGK 257
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK L AR DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 258 KGALLKQLGAEARADIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGY 305
>gi|389843751|ref|YP_006345831.1| GTP-binding protein Era [Mesotoga prima MesG1.Ag.4.2]
gi|387858497|gb|AFK06588.1| GTP-binding protein Era [Mesotoga prima MesG1.Ag.4.2]
Length = 300
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 176/288 (61%), Gaps = 6/288 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++GKPNVGKSTL N +IG+K++IV++KPQTTR+RI GI + + Q++ YDTPG I K +
Sbjct: 9 ALVGKPNVGKSTLINTIIGEKIAIVSDKPQTTRNRIGGILTTKKGQIVFYDTPG-IHKPL 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L ++K S+ +D ++V+VD D ++ V ++ ++P+ L +NK D
Sbjct: 68 HRLGQYILKVATSSLAGSDLLLVIVDPTDGLRESDRLVANHV--NQSRIPVFLAINKVDE 125
Query: 235 IKPGEIAKKLEWY--EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
K + + + E F D+ +SAK G GVE++ + I LP G +P+D++++
Sbjct: 126 YKNERLLQDFQAKAEELFNDIRRTFLISAKKGDGVEELLETIFDFLPEGKMLFPEDLITD 185
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
RF E+IREK+ R E+P++ V V + I+ +++VE++SQK I++
Sbjct: 186 RSSRFMASEVIREKVLQNTRQEIPHSVGVVVQEFSDEGNILK-IRADVIVERSSQKPIIL 244
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
GKGG +K++ T AR D+E +K++L++ VKV+E WR + L++ +
Sbjct: 245 GKGGSMIKIIGTEARKDLEYIFDQKIFLDLFVKVREKWRDKDTLIQEF 292
>gi|150390776|ref|YP_001320825.1| GTP-binding protein Era [Alkaliphilus metalliredigens QYMF]
gi|189037249|sp|A6TSJ8.1|ERA_ALKMQ RecName: Full=GTPase Era
gi|149950638|gb|ABR49166.1| GTP-binding protein Era [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 169/289 (58%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IG+K++I+++KPQTTR++I + S ++Q++ DTPGI + K
Sbjct: 9 TIIGRPNVGKSTLMNQIIGEKIAIMSDKPQTTRNKIQSVYSQEDFQIVFLDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+K R D ++ LVD + D + E + D K P+ L++NK D
Sbjct: 68 HKLGEYMVKVARDTLKEVDVVLFLVDEGQKIGPGDRFIMEQLKDIKT--PMFLIINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + + +E+ +IP+SA G ++ + I++ LP GP Y+P D++++ P
Sbjct: 126 MNQEILNEVCGLFEETGLFQRIIPISALEGANIDTLIKQIVSFLPEGPQYFPSDMITDQP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
ER V EI+REK+ E+P+ V K RP IQ I EK S K I+IG
Sbjct: 186 ERLLVAEIVREKLLHYLDQEIPHGIAVETSMMKQRPNQDIVDIQATIYCEKKSHKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG+ LK + +AR DIE L KV+LE+ VKV E+WR +LK GY
Sbjct: 246 KGGRKLKGVGKSARQDIEKLLGSKVFLELWVKVNEDWRNQSRILKSLGY 294
>gi|389856232|ref|YP_006358475.1| GTP-binding protein Era [Streptococcus suis ST1]
gi|353739950|gb|AER20957.1| GTP-binding protein Era [Streptococcus suis ST1]
Length = 299
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 183/290 (63%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + E Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + + D E++P+SA G+ V + + + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRQQMDFKEIVPISAIQGNNVNRLMEILKENLDEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTREEIPHSVAVVIESMKRDEFTDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|377809673|ref|YP_005004894.1| GTP-binding protein Era [Pediococcus claussenii ATCC BAA-344]
gi|361056414|gb|AEV95218.1| GTP-binding protein Era [Pediococcus claussenii ATCC BAA-344]
Length = 302
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 182/288 (63%), Gaps = 2/288 (0%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N ++GQK++I+++ PQTTR++I G+ + + Q+I DTPGI K
Sbjct: 12 AIVGRPNVGKSTFLNYVVGQKVAIMSDVPQTTRNKIQGVYTNDQEQIIFIDTPGI-HKAH 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S+ D ++ +V+A + D + E + DK PI LV+NK DL
Sbjct: 71 NKLGDFMVQSAMSSLNEVDAVMFMVNADQRRGAGDNFIIERLKKITDK-PIYLVINKIDL 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ + +E Y+ E+ P+SA G+ + ++ + + +LP GP YYP D V++HP
Sbjct: 130 VHPDDLFEIVESYKDALSWKEIFPISALQGNNINELINSLGQELPEGPQYYPDDQVTDHP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V E+IREK+ R EVP++ V + S K IQ I+V++ +QK I+IGK
Sbjct: 190 ERFIVSELIREKVLQLTRQEVPHSVAVLIDSMKRDDRDMVNIQATIIVDRPTQKGIIIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GGK LK + + ARLDIE+ L +VYLE+ VKV E WR + LL+ YGY
Sbjct: 250 GGKMLKEIGSRARLDIENLLGNRVYLELWVKVSEGWRDKQSLLQTYGY 297
>gi|116627505|ref|YP_820124.1| GTP-binding protein Era [Streptococcus thermophilus LMD-9]
gi|386086311|ref|YP_006002185.1| GTP-binding protein [Streptococcus thermophilus ND03]
gi|387909404|ref|YP_006339710.1| GTP-binding protein Era [Streptococcus thermophilus MN-ZLW-002]
gi|116100782|gb|ABJ65928.1| GTPase [Streptococcus thermophilus LMD-9]
gi|312278024|gb|ADQ62681.1| GTP-binding protein [Streptococcus thermophilus ND03]
gi|387574339|gb|AFJ83045.1| GTP-binding protein Era [Streptococcus thermophilus MN-ZLW-002]
Length = 299
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 182/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ + + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIKRL--KQAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + K D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDTVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|343493990|ref|ZP_08732274.1| GTPase Era [Vibrio nigripulchritudo ATCC 27043]
gi|342825631|gb|EGU60108.1| GTPase Era [Vibrio nigripulchritudo ATCC 27043]
Length = 321
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL NQ++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+
Sbjct: 26 HCGFVAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGVDTEGDYQAIFVDTPGL 85
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
++ ++ +M + S+ + + + LVD DE++ + +K P++L +
Sbjct: 86 HIEEKRAINRLMNRAANSSLSDVNLVFFLVDGTHWTSD-DEMVFTKL--NKSNFPVVLCV 142
Query: 230 NKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D +K E+ ++ + D +V+P+SAK+ ++ +R + LP ++P++
Sbjct: 143 NKVDNVKDRNEVMLHMQTLSEKMDFVDVVPISAKHDKNIDVLRKHVREHLPKATHHFPEE 202
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 347
V++ +RF EI+REK+ E+PY+ V + + P F I I+VE+N Q
Sbjct: 203 YVTDRSQRFMASEIVREKLMRFTGEELPYSVTVEIERFDYNPETDGFHINALILVERNGQ 262
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ++IGKGG+ +K + ARLD+E ++KVYLE VKVK W DE L+ GY
Sbjct: 263 KKMVIGKGGEKIKTIGREARLDMEALFERKVYLETWVKVKSGWADDERALRSLGY 317
>gi|313893315|ref|ZP_07826890.1| ribosome biogenesis GTPase Era [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442211|gb|EFR60628.1| ribosome biogenesis GTPase Era [Veillonella sp. oral taxon 158 str.
F0412]
Length = 299
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+ + K
Sbjct: 13 AVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDEAKQIVFMDTPGVHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 72 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--QRVKVPVFLVVNKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K E+ + + Y+ VIP+SAK + +I + LP GP Y+P+D++++ P
Sbjct: 130 LKKEELLEAIVSYQNAYPFAGVIPISAKDKENLPEILKVLEETLPEGPQYFPEDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK I+IGK
Sbjct: 190 ERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK L AR DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 250 KGALLKQLGAEARADIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGY 297
>gi|411010672|ref|ZP_11387001.1| GTPase Era [Aeromonas aquariorum AAK1]
gi|423199751|ref|ZP_17186333.1| GTPase Era [Aeromonas hydrophila SSU]
gi|404628829|gb|EKB25600.1| GTPase Era [Aeromonas hydrophila SSU]
Length = 299
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 172/291 (59%), Gaps = 6/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRILGI + YQ I DTPG+ ++
Sbjct: 11 AIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEENYQTIYVDTPGLHIEEK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD-KLPILLVLNKKD 233
++ +M + S+ + +V +VD + DE++ +G ++ K P++L +NK D
Sbjct: 71 RAINRLMNRAATSSLGDVAMVVFVVDGTHWT-KDDEMV---LGKLRNLKCPVVLAVNKID 126
Query: 234 LIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
+K E + LEW + + ++P+SA+ G VE IR+W LP ++P+D V++
Sbjct: 127 NVKEKEDLLPHLEWLGQQMNFSHILPISAEKGTNVEKIREWAKDLLPENVHFFPEDYVTD 186
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
RF EIIREK+ E+PY+ V + +K I I+VE+ QK ++I
Sbjct: 187 RSSRFMASEIIREKLMRFTGEELPYSVTVEIERFKVEENGLYHIHGLILVEREGQKKMVI 246
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G+ +K + T AR+D+E Q KV+LE+ VKVK W DE L+ GYG
Sbjct: 247 GNKGEKIKTIGTEARIDMERLFQNKVHLELWVKVKSGWADDERALRSLGYG 297
>gi|330997749|ref|ZP_08321588.1| ribosome biogenesis GTPase Era [Paraprevotella xylaniphila YIT
11841]
gi|329569848|gb|EGG51606.1| ribosome biogenesis GTPase Era [Paraprevotella xylaniphila YIT
11841]
Length = 294
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 174/290 (60%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q+ DTPG+++
Sbjct: 9 NIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTEDMQICFSDTPGVLKPNY 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ + LE+ K +P+L+++NK D+
Sbjct: 69 KLQESMLNFS-ESALQDADVLLYVTDMVETPDKNGDFLEKV---SKMDVPVLVLINKIDV 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
E+ K+E + E+IP+SA ++ + + I LP P Y+ KD ++ P
Sbjct: 125 SNQQELTSKVEAWHAVLPKAEIIPISALCKFNIDTVLNRIKDLLPDSPPYFGKDQWTDKP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ SQK I+IG
Sbjct: 185 ARFFVTEIIREKILLYYDKEIPYSVEVVVERFKE--AAKSIHINAVIYVERESQKGIIIG 242
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G ALK ++T AR +E F K +YLE VKV ++WR E LK +GY
Sbjct: 243 HRGVALKKVSTEARKSLEKFFGKSIYLETFVKVDKDWRSSERALKSFGYN 292
>gi|381195726|ref|ZP_09903068.1| GTPase Era [Acinetobacter lwoffii WJ10621]
Length = 342
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 177/301 (58%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 43 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSRAKSQAVFVDTPGMHKKEV 102
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ ++DA K + DE++ E + + ++P++LV+NK D+
Sbjct: 103 RAINKMMNRAASSALRDVNLVLFVLDADKWTQN-DELVLEKLKNA--EMPVILVINKIDI 159
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ A L + K + E++PVSA G ++ +RD I LP P Y D +++
Sbjct: 160 LENKNHALPLIQERAKLMNFAEIVPVSALRGANLDHLRDTIEKYLPFQPPMYSLDQLTDR 219
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT----------RPT-AKDFIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT RP A +I I V
Sbjct: 220 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRPKPACTYIDATIFV 279
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ QK I+IG+ G LK + AR+D+E ++K+ L + VKVK W DE LK GY
Sbjct: 280 DRPGQKAIVIGEKGAKLKKIGMDARIDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 339
Query: 403 G 403
Sbjct: 340 S 340
>gi|366089214|ref|ZP_09455687.1| GTPase Era [Lactobacillus acidipiscis KCTC 13900]
Length = 300
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 180/293 (61%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKST N +IGQK++I+++KPQTTR++I GI + + Q+I DTPG
Sbjct: 6 HSGFVAIIGRPNVGKSTFLNYVIGQKIAIMSDKPQTTRNKIQGIYTTDDSQIIFIDTPG- 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
I K L M+ + S D ++ +V+A + + D+ + + + + K PI LV+
Sbjct: 65 IHKPQSKLGDFMVDSALSTLNEVDAVLFMVNATQKRGKGDDFIIKRLQNVKK--PIYLVI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P +I ++ Y D EV P+SA G+ V ++ D ++T LP GP +YP+D
Sbjct: 123 NKIDQIHPNDILPIVDDYRHALDFQEVYPISALKGNNVFELVDNLVTDLPEGPQFYPEDE 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++HPERF + E+IREK+ R E+P++ V K K + I+VE+NSQK
Sbjct: 183 VTDHPERFIISELIREKVNQLTREEIPHSVAVVTERVKRENEQKIQVSASIIVERNSQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + T AR DIE L KVYLE+ VKV+ENW+ + L+ GY
Sbjct: 243 IIIGKGGKMLKRIGTLARKDIETLLGDKVYLELWVKVQENWKDRKTDLQSLGY 295
>gi|330446942|ref|ZP_08310593.1| GTP-binding protein Era [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491133|dbj|GAA05090.1| GTP-binding protein Era [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 301
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 177/302 (58%), Gaps = 19/302 (6%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ + DTPG+
Sbjct: 6 HCGFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVYVDTPGL 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
++ ++ +M + S+ + + ++ LVD + + +L + K +LP +L++
Sbjct: 66 HIEEKRTINRLMNRAASSSLTDVELVLFLVDGTMWTDDDEMVLNKLA---KSQLPTVLLV 122
Query: 230 NKKDLIKPG--------EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
NK D +K E+A K+E+ +V+PVSAK+G ++ + + LP
Sbjct: 123 NKVDNVKDKHELFPHLQELASKMEFV-------DVVPVSAKHGTNIDAVEKIVREHLPEC 175
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEI 340
Y+P++ V++ +RF EIIREK+ +E+PY+ V + + P F I I
Sbjct: 176 EYYFPEEYVTDRSQRFMASEIIREKLMRFTGDELPYSVTVEIERFDYNPETDGFDINGLI 235
Query: 341 VVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHY 400
+VE+ QK ++IGKGG +K++ ARLD+ED ++KVYLE+ VKVK W DE L+
Sbjct: 236 LVERKGQKKMVIGKGGDKIKVIGREARLDMEDLFERKVYLELWVKVKSGWADDERALRSL 295
Query: 401 GY 402
GY
Sbjct: 296 GY 297
>gi|156975791|ref|YP_001446698.1| GTP-binding protein Era [Vibrio harveyi ATCC BAA-1116]
gi|156527385|gb|ABU72471.1| hypothetical protein VIBHAR_03535 [Vibrio harveyi ATCC BAA-1116]
Length = 320
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 186/319 (58%), Gaps = 16/319 (5%)
Query: 96 SPDDYEIEEFDYASH-----PNHK-----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQT 145
+ ++++I+ F +ASH P ++ +++G+PNVGKSTL N+++GQK+SI + KPQT
Sbjct: 2 ADNEFDIDAF-FASHGEVSSPENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQT 60
Query: 146 TRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP 205
TRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + + LVD
Sbjct: 61 TRHRIMGVDTEGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLVDGTHWT 120
Query: 206 ERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYG 264
+ +L + K P++L +NK D ++ E+ + K D +V+P+SAK+G
Sbjct: 121 NDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMLHMMDMSKKMDFVDVVPISAKHG 177
Query: 265 HGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV 324
+E +R + LP ++P++ V++ +RF EI+REK+ +E+PY+ V +
Sbjct: 178 KNIEVLRKHVRDHLPKSTHHFPEEYVTDRSQRFMASEIVREKLMRFTGDELPYSVTVEIE 237
Query: 325 SYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIE 383
+ P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+ +KVYLE
Sbjct: 238 RFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEELFGRKVYLETW 297
Query: 384 VKVKENWRQDEGLLKHYGY 402
VKVK W DE L+ GY
Sbjct: 298 VKVKSGWADDERALRSLGY 316
>gi|431794885|ref|YP_007221790.1| GTP-binding protein Era [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430785111|gb|AGA70394.1| GTP-binding protein Era [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 303
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 183/301 (60%), Gaps = 10/301 (3%)
Query: 108 ASHPNHK------SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 161
S PN + +V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q+
Sbjct: 3 GSKPNEEFRSGFVTVIGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQV 62
Query: 162 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 221
I DTPGI + K H L M+ + + D I+ +VD +E + E + +
Sbjct: 63 IFLDTPGIHKPK-HKLGEFMVDSALESLREVDLILYMVDVTAEFGPGEEYILENL--KQI 119
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
K P +LVLNK DLI+ ++ KK++ + D +IP+SAK G E++ I +LP G
Sbjct: 120 KTPCILVLNKIDLIEKDKLLKKIKDFSALKDFLAIIPLSAKTGENKEELLKIIFKELPKG 179
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 341
P YYP+D V++ PERF + E++REK+ R+EVP++ V V S + + T ++ IV
Sbjct: 180 PMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVLVESVEEKKTLVK-VRAVIV 238
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
VE++SQK I+IG GK LK + + AR DIE L KV+LE+ VKV+++WR L+ +G
Sbjct: 239 VERDSQKGIIIGHEGKVLKEIGSLARQDIEKLLGSKVFLELFVKVEKDWRNRGRSLREFG 298
Query: 402 Y 402
Y
Sbjct: 299 Y 299
>gi|282850278|ref|ZP_06259657.1| GTP-binding protein Era [Veillonella parvula ATCC 17745]
gi|416998951|ref|ZP_11939620.1| ribosome biogenesis GTPase Era [Veillonella parvula
ACS-068-V-Sch12]
gi|282579771|gb|EFB85175.1| GTP-binding protein Era [Veillonella parvula ATCC 17745]
gi|333977104|gb|EGL77963.1| ribosome biogenesis GTPase Era [Veillonella parvula
ACS-068-V-Sch12]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+ + K
Sbjct: 13 AVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDESKQIVFMDTPGVHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 72 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVVNKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K E+ + + Y+ VIP+SAK + +I + LP GP Y+P+D++++ P
Sbjct: 130 LKKEELLEAIVSYQDAYPFAGVIPISAKDKENLSEILKVLEETLPEGPQYFPEDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK I+IGK
Sbjct: 190 ERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK L AR DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 250 KGALLKQLGAEARADIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGY 297
>gi|269798051|ref|YP_003311951.1| GTP-binding protein Era [Veillonella parvula DSM 2008]
gi|269094680|gb|ACZ24671.1| GTP-binding protein Era [Veillonella parvula DSM 2008]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+ + K
Sbjct: 13 AVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDESKQIVFMDTPGVHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 72 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVVNKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K E+ + + Y+ VIP+SAK + +I + LP GP Y+P+D++++ P
Sbjct: 130 LKKEELLEAIVSYQDAYPFAGVIPISAKDKENLSEILKVLEETLPEGPQYFPEDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK I+IGK
Sbjct: 190 ERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK L AR DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 250 KGALLKQLGAEARADIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGY 297
>gi|343514881|ref|ZP_08751946.1| GTP-binding protein Era [Vibrio sp. N418]
gi|342799247|gb|EGU34822.1| GTP-binding protein Era [Vibrio sp. N418]
Length = 326
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 183/335 (54%), Gaps = 17/335 (5%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD + F S EK +SP + H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFDIDAYFASGGEKK---TSSPTN---------QHCGFIAIVGRPNVGKSTLLN 50
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 51 NILGQKISITSRKPQTTRHRIMGVDTEGDYQAIFVDTPGLHIEEKRAINRLMNRAANSSL 110
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYE 248
+ + + LVD + +L + P++L +NK D++ ++ +
Sbjct: 111 SDVNLVFFLVDGTHWTADDEMVLNKL---RNANFPVVLCVNKVDVVNDRNDVMLHMADLS 167
Query: 249 KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIF 308
K D +++P+SAK+G V+ +R + LP ++P++ V++ +RF EI+REK+
Sbjct: 168 KLMDFVDIVPISAKHGKNVDVLRKHVRAHLPKATHHFPEEYVTDRSQRFMASEIVREKLM 227
Query: 309 MQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAAR 367
E+PY+ V + + P F I I+VE++ QK ++IGKGG+ +K + AR
Sbjct: 228 RFTGEELPYSVTVEIERFDYNPDTDGFHINALILVERSGQKKMVIGKGGEKIKTIGREAR 287
Query: 368 LDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 288 LDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 322
>gi|116617891|ref|YP_818262.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|381336368|ref|YP_005174143.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|122271908|sp|Q03Y33.1|ERA_LEUMM RecName: Full=GTPase Era
gi|116096738|gb|ABJ61889.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|356644334|gb|AET30177.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 303
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 176/289 (60%), Gaps = 3/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + + Q++ DTPG+ K
Sbjct: 12 AIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDDAQVVFIDTPGV-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K+ SA AD I +VDA A R D+ + + + + K+ PI L++NK DL
Sbjct: 71 NSLGDFMVKSAFSALHEADAIWFVVDASMARGRGDDFIIDRLQEVKNT-PIYLLINKVDL 129
Query: 235 IKPGEIAKKLEWYEK-FTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P ++ + Y+ + EV P+SA G V ++ D I++ L GP Y+ D +++H
Sbjct: 130 LAPNDLLDVIASYQNDAPEWAEVFPISATEGDNVPELLDNIVSHLDEGPQYFDADQLTDH 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK I+IG
Sbjct: 190 PERFVIGELIREKVLQLTRQEVPHSVAVVIDKIARENEEKIHIQASIIVERPTQKNIIIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G +K + T AR DIE L KV+LE VKV+ WR L+ GY
Sbjct: 250 KQGAMIKDIGTRARKDIERLLGDKVFLETWVKVEPRWRDRPQALQTLGY 298
>gi|228478255|ref|ZP_04062863.1| GTP-binding protein Era [Streptococcus salivarius SK126]
gi|418018215|ref|ZP_12657771.1| GTPase Era [Streptococcus salivarius M18]
gi|228249934|gb|EEK09204.1| GTP-binding protein Era [Streptococcus salivarius SK126]
gi|345527064|gb|EGX30375.1| GTPase Era [Streptococcus salivarius M18]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AIIGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++E + D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIEDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDEMKRDEDTDKIHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGSMLKKIGTLARKDIEVMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|210617164|ref|ZP_03291431.1| hypothetical protein CLONEX_03653 [Clostridium nexile DSM 1787]
gi|210149439|gb|EEA80448.1| hypothetical protein CLONEX_03653 [Clostridium nexile DSM 1787]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I +NKPQTTR+RI + + E Q++ DTPGI + K
Sbjct: 11 TLIGRPNVGKSTLMNYLIGQKIAITSNKPQTTRNRIQTVLTMEEGQIVFVDTPGIHKAKN 70
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDH--KDKLPILLVLNK 231
+ + M+ NV +N D ++ LV+ P E+ + D K K P++LV+NK
Sbjct: 71 KLGEYMV--NVAERTLNEVDVVLWLVE----PSTFIGAGEKHIADQLKKVKTPVVLVINK 124
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D++K E+ ++ Y K D E++PVSA+ G +++ IL LP GP +Y +D V+
Sbjct: 125 VDMVKREEVLTFIDAYRKIYDFAEIVPVSARSGENTDELVKVILQYLPYGPQFYDEDTVT 184
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ PER V E+IREK E+P+ V++ K R D I I+ E++S K I+
Sbjct: 185 DQPERQIVSELIREKALHCLNEEIPHGIAVSIDRMKARKKVMD-IDATIICERDSHKGII 243
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G LK + + AR +IE L KV L++ VKVK++WR + L++++GY
Sbjct: 244 IGKQGSMLKKIGSTARFEIERLLDCKVNLQLWVKVKKDWRDSDFLIQNFGY 294
>gi|332522204|ref|ZP_08398456.1| ribosome biogenesis GTPase Era [Streptococcus porcinus str.
Jelinkova 176]
gi|332313468|gb|EGJ26453.1| ribosome biogenesis GTPase Era [Streptococcus porcinus str.
Jelinkova 176]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEQEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + DE++ E + + K +P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDEMIMERLKNAK--IPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ + + + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRSQMDFKEIVPISALEGNNIPTLMSLLTDNLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDEDTDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|159899753|ref|YP_001546000.1| GTP-binding protein Era [Herpetosiphon aurantiacus DSM 785]
gi|159892792|gb|ABX05872.1| GTP-binding protein Era [Herpetosiphon aurantiacus DSM 785]
Length = 489
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 173/297 (58%), Gaps = 6/297 (2%)
Query: 106 DYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 165
D H +++GKPNVGKSTL N +GQK+SIV+ KPQTTR + GI +GP+ Q+I D
Sbjct: 192 DQEVHSGFVALVGKPNVGKSTLLNAYLGQKVSIVSPKPQTTRVPVRGILNGPDAQIIFVD 251
Query: 166 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 225
TPG I K H L + M+ + A NAD I +VD P R+D + + V + P
Sbjct: 252 TPG-IHKPRHKLGNFMVDVAKRAVPNADVICFMVDITVPPNRMDREIAQMV--LLSRKPH 308
Query: 226 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
+LVLNK D E K L+ Y + + VSA+ G+E + I+ +LP+G Y
Sbjct: 309 ILVLNKVDATD--EADKHLQEYRDLAPWEMEVAVSARDKLGMETLLAEIVQRLPVGHRLY 366
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
P+D +S+ ER V E+IREK+ + E+P++ V V ++ R +I+ I VEK+
Sbjct: 367 PEDQLSDVSERSLVAEMIREKVMLNTEEEIPHSIAVEVEEWEDRGKVV-YIRANISVEKD 425
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
SQK I+IG GG L+ + +R +IE L +++YL++ +KV+ENWRQ L+ GY
Sbjct: 426 SQKGIIIGAGGSMLRKIGATSRFEIERSLGRQIYLDLWIKVRENWRQKPNELRWLGY 482
>gi|86608744|ref|YP_477506.1| GTP-binding protein Era [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557286|gb|ABD02243.1| GTP-binding protein Era [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 361
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 169/290 (58%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I + QTTR+R+ GI S P+ Q+I DTPGI K
Sbjct: 72 ALIGRPNVGKSTLLNALVGQKVAITSPVAQTTRNRLQGILSLPQAQIIWVDTPGI-HKPH 130
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L +++ N ++A D I+ +VD R D + E + P L+V NK DL
Sbjct: 131 HRLGEILVHNAQAAIAAVDVILFVVDGSVPAGRGDAFIAERI---PAASPCLIVCNKADL 187
Query: 235 IKPGEIAKKL--EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
+ ++ E Y+ V+ VSA + + + LP GP YYP D+V++
Sbjct: 188 LPRDAAVRQAHQESYQALRPGAPVVWVSALDPSSLTPLIQATIDLLPTGPYYYPPDLVTD 247
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERF + E+IRE++ +Q R EVP++ V + + P + + VE++SQK ILI
Sbjct: 248 QPERFIMAELIREQVLLQTREEVPHSVAVTIDQVEETPNVTRIL-ATLYVERDSQKGILI 306
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG+ LK + AARL I+ + KVYLE+ VKV+ +WR+ E LL+ GY
Sbjct: 307 GKGGERLKRIGQAARLQIQKLILGKVYLELFVKVRPHWRRSEHLLRDLGY 356
>gi|194397601|ref|YP_002037604.1| GTP-binding protein Era [Streptococcus pneumoniae G54]
gi|226741240|sp|B5E488.1|ERA_STRP4 RecName: Full=GTPase Era
gi|194357268|gb|ACF55716.1| GTP-binding protein Era homolog [Streptococcus pneumoniae G54]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQ ++I+ +K TTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQXIAIMXDKAXTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A +A + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVVNKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D E++P+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 294
>gi|450127723|ref|ZP_21868699.1| GTP-binding protein Era [Streptococcus mutans U2A]
gi|449230343|gb|EMC29605.1| GTP-binding protein Era [Streptococcus mutans U2A]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+ G LK + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 RQGAMLKKIGQLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|428315511|ref|YP_007113393.1| GTP-binding protein Era-like-protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428239191|gb|AFZ04977.1| GTP-binding protein Era-like-protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 315
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 177/297 (59%), Gaps = 24/297 (8%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DTPG I K H
Sbjct: 29 IVGRPNVGKSTLMNQLVGQKIAITSPVSQTTRNRLRGILTTPEAQIIFVDTPG-IHKPHH 87
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILLV 228
L ++++N R+A + D ++ +VD +E G GD K+P++L
Sbjct: 88 QLGKVLVQNARTAIQSVDVVLFVVDGS---------VESGGGDRYIVEILSNCKVPVILG 138
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK D +P + YE+ + + V+ SA G GVE ++ ++ L +GP YYP
Sbjct: 139 MNKLDE-QPSDCVLIDRTYEQIVNPEWPVVKFSALTGEGVESLQQLLIEHLEVGPYYYPP 197
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPY--ACQVNVVSYKTRPTAKDFIQVEIVVEKN 345
D+V++ PERF +GE+IRE+I + R EVP+ A +++V + + T I I VE++
Sbjct: 198 DLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDIVQEEAKITR---ILATIHVERD 254
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
SQK ILIGK G LK + +AAR I+ ++ KVYLE+ VKV+ WRQ L GY
Sbjct: 255 SQKGILIGKSGSMLKSIGSAAREQIQKLIEGKVYLELFVKVQPKWRQSRTRLAELGY 311
>gi|343503693|ref|ZP_08741502.1| GTP-binding protein Era [Vibrio ichthyoenteri ATCC 700023]
gi|342814285|gb|EGU49232.1| GTP-binding protein Era [Vibrio ichthyoenteri ATCC 700023]
Length = 326
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 183/335 (54%), Gaps = 17/335 (5%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD + F S EK +SP + H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFDIDAYFASGGEKK---ASSPTN---------QHCGFIAIVGRPNVGKSTLLN 50
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 51 NILGQKISITSRKPQTTRHRIMGVDTEGDYQAIFVDTPGLHIEEKRAINRLMNRAANSSL 110
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYE 248
+ + + LVD + +L + P++L +NK D++ ++ +
Sbjct: 111 SDVNLVFFLVDGTHWTADDEMVLNKL---RNANFPVVLCVNKVDVVNDRNDVMLHMADLS 167
Query: 249 KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIF 308
K D +++P+SAK+G V+ +R + LP ++P++ V++ +RF EI+REK+
Sbjct: 168 KLMDFVDIVPISAKHGKNVDVLRKHVRAHLPKATHHFPEEYVTDRSQRFMASEIVREKLM 227
Query: 309 MQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAAR 367
E+PY+ V + + P F I I+VE++ QK ++IGKGG+ +K + AR
Sbjct: 228 RFTGEELPYSVTVEIERFDYNPDTDGFHINALILVERSGQKKMVIGKGGEKIKTIGREAR 287
Query: 368 LDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 288 LDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 322
>gi|450067481|ref|ZP_21846668.1| GTP-binding protein Era [Streptococcus mutans NLML9]
gi|449208040|gb|EMC08676.1| GTP-binding protein Era [Streptococcus mutans NLML9]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETNKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+ G LK + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 RQGAMLKKIGQLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|55822589|ref|YP_141030.1| GTP-binding protein Era [Streptococcus thermophilus CNRZ1066]
gi|55738574|gb|AAV62215.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVVNKIDR 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + K D E+IP+SA G+ V + D L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVSSDYLEEGFQYFPSDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + S K T I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDTVHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|421452007|ref|ZP_15901368.1| GTP-binding protein era [Streptococcus salivarius K12]
gi|400182438|gb|EJO16700.1| GTP-binding protein era [Streptococcus salivarius K12]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDQMKRDEDTDKIHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGSMLKKIGTLARKDIEVMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|340399227|ref|YP_004728252.1| GTP-binding protein [Streptococcus salivarius CCHSS3]
gi|387761693|ref|YP_006068670.1| GTP-binding protein Era [Streptococcus salivarius 57.I]
gi|338743220|emb|CCB93728.1| GTP-binding protein [Streptococcus salivarius CCHSS3]
gi|339292460|gb|AEJ53807.1| GTP-binding protein Era [Streptococcus salivarius 57.I]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E+IP+SA G+ V + D + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ R E+P++ V + K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLQLTREEIPHSVAVVIDEMKRDEDTDKIHIRATIMVERDSQKGIVIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + T AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 KQGSMLKKIGTLARKDIEVMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|160878804|ref|YP_001557772.1| GTP-binding protein Era [Clostridium phytofermentans ISDg]
gi|160427470|gb|ABX41033.1| GTP-binding protein Era [Clostridium phytofermentans ISDg]
Length = 305
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 174/290 (60%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I ++KPQTTR+RI + + + Q+I DTPGI + K
Sbjct: 14 TLIGRPNVGKSTLMNQLIGQKIAITSDKPQTTRNRIQTVYTEEQGQIIFLDTPGIHQAKN 73
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 233
+ M N+ IN D I+ LV+ ++ + E + +K K P++LV+NK D
Sbjct: 74 KL--GQFMVNIAERTINEVDVILWLVEPSTFIGAGEQHIIEKL--NKSKTPVILVINKID 129
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K EI ++ Y + E++PVSA G + + D I LP GP Y+ +D V++
Sbjct: 130 TVKKQEILTFIDAYRDKCNFAEIVPVSALKGENKQQLIDVIFKYLPNGPMYFDEDTVTDQ 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
PER V E+IREK +E+P+ V + K RP K I I+ E++S K I+I
Sbjct: 190 PERQIVAELIREKALRLLSDEIPHGIAVTIERMKERPDGKVIDIDATIICERDSHKGIII 249
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + AR++IE+ L KV+L++ VKVK+ WR + L+K+YGY
Sbjct: 250 GKQGAMLKNIGMKARVEIENLLDTKVFLQLWVKVKKEWRDSDFLIKNYGY 299
>gi|238917282|ref|YP_002930799.1| GTP-binding protein Era [Eubacterium eligens ATCC 27750]
gi|238872642|gb|ACR72352.1| GTP-binding protein Era [Eubacterium eligens ATCC 27750]
Length = 322
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 173/295 (58%), Gaps = 14/295 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+ +G+PNVGKSTL NQ+IGQK++I +NKPQTTR+RI + + Q++ DTPGI + K
Sbjct: 29 TFIGRPNVGKSTLMNQIIGQKIAITSNKPQTTRNRIQTVYTDERGQIVFVDTPGIHKAK- 87
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDHKDKLPILLVLN 230
+ L M+ D I LV+ A E I E L+E K PI+LV+N
Sbjct: 88 NKLGEYMVGAAEKTISEVDLICWLVEPTTHLGAAEEHIVEKLKEC------KTPIVLVIN 141
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D IK EI ++ Y K D +++PV A+ G+ V+D+ D I L GP YY +D V
Sbjct: 142 KTDTIKKEEILPVIDCYRKELDFVDIVPVCARNGNNVDDLLDVIFLHLDYGPMYYDEDTV 201
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK---DFIQVEIVVEKNSQ 347
++ P + V E+IREK +E+P+ V + S+K R A+ I I+ E++S
Sbjct: 202 TDQPMKQIVAELIREKALHALNDEIPHGIAVVIDSFKERRNARGPITDIDATIICERDSH 261
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGKGG+ LK + T AR +IE L KV L++ VKVK+ WR + LLK++GY
Sbjct: 262 KGIIIGKGGEMLKKIGTNARYEIEKQLDMKVNLKLWVKVKKEWRDSDILLKNFGY 316
>gi|429726176|ref|ZP_19260982.1| ribosome biogenesis GTPase Era [Prevotella sp. oral taxon 473 str.
F0040]
gi|429147421|gb|EKX90447.1| ribosome biogenesis GTPase Era [Prevotella sp. oral taxon 473 str.
F0040]
Length = 293
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 179/289 (61%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNLLMGERISIATFKAQTTRHRIMGIINSEDAQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + A +AD ++ + D + P++ + + + + K+P+ +++NK DL
Sbjct: 68 KLQESMLAFS-EGALQDADILLYVTDVVEKPDKNADFITKV---QRMKIPVFVLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ K +E + + E+ P+SA+ V+ + I LP P Y+ KD ++ P
Sbjct: 124 SNQEGVMKLIEAWHEVLPTAEIFPISAQAKFNVDAVLARIKELLPDSPPYFDKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
RFFV EIIREKI + Y E+PY+ +V V +K + K+ I+ I VE++SQK I+IG
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVAVEEFKE--SEKNIRIRAIIYVERDSQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G ALK ++T AR +E F QK +YLE+ VKV ++WRQ++ L+ +GY
Sbjct: 242 HKGVALKKVSTEARKTLEKFFQKSIYLEVYVKVDKDWRQNDRRLEAFGY 290
>gi|400289799|ref|ZP_10791826.1| GTP-binding protein Era [Streptococcus ratti FA-1 = DSM 20564]
gi|399920590|gb|EJN93407.1| GTP-binding protein Era [Streptococcus ratti FA-1 = DSM 20564]
Length = 298
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 178/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTKTEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVETVLFMVPADEERGKGDNMIMERL--KAAKIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +K+E + D E++P+SA G+ VE + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEKIEDFRSQMDFKEIVPISALQGNNVETLMTILKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKILKLTEQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|319943506|ref|ZP_08017788.1| GTP-binding protein Era [Lautropia mirabilis ATCC 51599]
gi|319743321|gb|EFV95726.1| GTP-binding protein Era [Lautropia mirabilis ATCC 51599]
Length = 309
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 173/290 (59%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PN GKSTL NQ++GQ LSI ++ QTTRHRI G+ S P Q+IL D+PG ++I
Sbjct: 24 ALVGRPNTGKSTLLNQLLGQMLSITADRAQTTRHRIQGVLSRPHAQLILVDSPGYQTQRI 83
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L+ ++ + +S G AD +V++ +A + + DEIL G K P+++ LNK D
Sbjct: 84 NPLNKILNRTAQSVGQQADVVVLVTEAGRWRRQDDEIL----GWLKGDAPVIVALNKIDQ 139
Query: 235 IKPGEIAKKL--EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
++ L + +E + ++P+ A+ G G+E + D I + LP G A Y +D +++
Sbjct: 140 LRNVNEVLPLIAQVHEAHPGLAAIVPICARNGQGIEALLDAIESNLPEGEAIYGEDELTD 199
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERFF EI+REK+F E+PY V + ++ + I I+VE+ + K I++
Sbjct: 200 RPERFFAAEIVREKLFRLLGEELPYESTVVIDRFEEEGNLRR-IAATIIVERRAHKPIVL 258
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G GG+ +K +A+ AR D+E KV+L + V+V+ W +D L+ YGY
Sbjct: 259 GHGGERIKRIASEARQDMERMFDGKVFLTLWVQVRSGWAKDAAHLRSYGY 308
>gi|450181979|ref|ZP_21888078.1| GTP-binding protein Era [Streptococcus mutans 24]
gi|449245421|gb|EMC43758.1| GTP-binding protein Era [Streptococcus mutans 24]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSRLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETNKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+ G LK + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 RQGAMLKKIGQLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|28899345|ref|NP_798950.1| GTP-binding protein Era [Vibrio parahaemolyticus RIMD 2210633]
gi|153839957|ref|ZP_01992624.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ3810]
gi|260365942|ref|ZP_05778432.1| GTP-binding protein Era [Vibrio parahaemolyticus K5030]
gi|260878964|ref|ZP_05891319.1| GTP-binding protein Era [Vibrio parahaemolyticus AN-5034]
gi|260898319|ref|ZP_05906815.1| GTP-binding protein Era [Vibrio parahaemolyticus Peru-466]
gi|260899640|ref|ZP_05908035.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ4037]
gi|433658646|ref|YP_007276025.1| GTP-binding protein Era [Vibrio parahaemolyticus BB22OP]
gi|31340053|sp|Q87LP0.1|ERA_VIBPA RecName: Full=GTPase Era
gi|28807581|dbj|BAC60834.1| GTP-binding protein Era [Vibrio parahaemolyticus RIMD 2210633]
gi|149746516|gb|EDM57505.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ3810]
gi|308085246|gb|EFO34941.1| GTP-binding protein Era [Vibrio parahaemolyticus Peru-466]
gi|308090470|gb|EFO40165.1| GTP-binding protein Era [Vibrio parahaemolyticus AN-5034]
gi|308110555|gb|EFO48095.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ4037]
gi|308113214|gb|EFO50754.1| GTP-binding protein Era [Vibrio parahaemolyticus K5030]
gi|432509334|gb|AGB10851.1| GTP-binding protein Era [Vibrio parahaemolyticus BB22OP]
Length = 320
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 186/319 (58%), Gaps = 16/319 (5%)
Query: 96 SPDDYEIEEFDYASH-----PNHK-----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQT 145
+ ++++I+ F +ASH P ++ +++G+PNVGKSTL N+++GQK+SI + KPQT
Sbjct: 2 ADNEFDIDAF-FASHGEVSSPENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQT 60
Query: 146 TRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP 205
TRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + + LVD
Sbjct: 61 TRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLVDGTHWT 120
Query: 206 ERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYG 264
+ + +L + K P++L +NK D ++ E+ + K D +V+P+SAK G
Sbjct: 121 KDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMLHMAEMSKKMDFVDVVPISAKQG 177
Query: 265 HGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV 324
++ +R + LP ++P++ V++ +RF EI+REK+ +E+PY+ V +
Sbjct: 178 KNIDVLRKHVRNHLPKATHHFPEEYVTDRSQRFMASEIVREKLMRFTGDELPYSVTVEIE 237
Query: 325 SYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIE 383
+ P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+ +KVYLE
Sbjct: 238 RFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEELFGRKVYLETW 297
Query: 384 VKVKENWRQDEGLLKHYGY 402
VKVK W DE L+ GY
Sbjct: 298 VKVKSGWADDERALRSLGY 316
>gi|449929259|ref|ZP_21801489.1| GTP-binding protein Era [Streptococcus mutans 3SN1]
gi|449164726|gb|EMB67771.1| GTP-binding protein Era [Streptococcus mutans 3SN1]
Length = 299
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA + V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQDNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V V S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSVAVVVDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KKGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|238854658|ref|ZP_04644988.1| GTP-binding protein Era [Lactobacillus jensenii 269-3]
gi|260664399|ref|ZP_05865251.1| GTP-binding protein Era [Lactobacillus jensenii SJ-7A-US]
gi|313472197|ref|ZP_07812689.1| GTP-binding protein Era [Lactobacillus jensenii 1153]
gi|238832448|gb|EEQ24755.1| GTP-binding protein Era [Lactobacillus jensenii 269-3]
gi|239529577|gb|EEQ68578.1| GTP-binding protein Era [Lactobacillus jensenii 1153]
gi|260561464|gb|EEX27436.1| GTP-binding protein Era [Lactobacillus jensenii SJ-7A-US]
Length = 302
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 171/290 (58%), Gaps = 8/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK+ I +NKPQTTR++I GI + Q + DTPGI + K
Sbjct: 13 ALIGRPNVGKSTLMNHLIGQKVVITSNKPQTTRNKISGIFTTDNLQAVFVDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD--HKDKLPILLVLNKK 232
+ LD M K S+ + D + +V+ PE++ + +E + D K K P+ L++NK
Sbjct: 72 NKLDDYMDKASLSSLNDVDLVFFMVE----PEKVGK-GDEYIADLLSKVKAPVFLIINKI 126
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + P + +E Y+K E++P+SA G+ +ED+ + LP GP +Y D V++
Sbjct: 127 DQVHPDALLPVIESYQKLGKFAEIVPISATNGNNMEDLISTLYKYLPEGPQFYGSDEVTD 186
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PE F V E+IRE+I + E+P+A V V R K ++ I VE++ QK I+I
Sbjct: 187 RPEYFVVAELIREQILRLTQQEIPHATAVVVDRMNERINGKLQVEATIYVERDGQKKIII 246
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G+GG LK + +R IE L +K+ L + VKV++NWR D LK GY
Sbjct: 247 GRGGSMLKKIGIQSRKQIESLLGEKINLHLWVKVQKNWRTDPSFLKQIGY 296
>gi|237807624|ref|YP_002892064.1| GTP-binding protein Era [Tolumonas auensis DSM 9187]
gi|237499885|gb|ACQ92478.1| GTP-binding protein Era [Tolumonas auensis DSM 9187]
Length = 300
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 171/290 (58%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRILGI + YQ I DTPG+ ++
Sbjct: 12 AIVGRPNVGKSTLLNKLLGQKVSITSRKPQTTRHRILGIDTQGAYQTIFVDTPGLHIEEK 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ + + +V +VD + + +L + H P++L +NK D+
Sbjct: 72 RAINRLMNRAATSSLGDVEMVVFVVDGTHWTDDDEMVLNKLRHMH---CPVVLAVNKVDV 128
Query: 235 IKPGEIA-KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
IK EI L+ + + E++P+SA+ G VE IR+ LP G Y+P+D +++
Sbjct: 129 IKDKEILLPHLQMLAQKGNFAEILPISAEKGTNVEKIREMAKRLLPEGEHYFPEDYITDR 188
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ E+PY+ V + +K I I+VE+ QK ++IG
Sbjct: 189 SSRFMASEIIREKLMRFTGEELPYSVTVEIERFKVEEDGLFHINALILVEREGQKKMVIG 248
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ LK++ T ARLD+E ++V+LE+ VKVK W DE L+ GYG
Sbjct: 249 NKGEKLKVIGTEARLDMERLFGQRVFLELWVKVKSGWADDERALRSLGYG 298
>gi|450105328|ref|ZP_21859840.1| GTP-binding protein Era [Streptococcus mutans SF14]
gi|449224929|gb|EMC24553.1| GTP-binding protein Era [Streptococcus mutans SF14]
Length = 299
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLLLTREEIPHSIAVVIDSMARDEETHKIHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
+ G LK + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 246 RQGAMLKKIGQLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYN 295
>gi|323453654|gb|EGB09525.1| hypothetical protein AURANDRAFT_71340 [Aureococcus anophagefferens]
Length = 1193
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 174/318 (54%), Gaps = 33/318 (10%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
V+G PNVGKSTL N ++GQ L I +K QTTRHRILG+ +G YQ++L DTPGI+
Sbjct: 874 GVVGSPNVGKSTLTNALLGQDLCITNSKAQTTRHRILGVANGDGYQLVLSDTPGILCDPA 933
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERI-------DEILEEGVGDHKDKLPILL 227
+ L S MM ++A +A+C++ + D + PE + D L GD K P+++
Sbjct: 934 YALQSTMMTAAKAAARDAECVLFVTDVFEDPEVVAESAAWLDAQLASRAGDEP-KPPVVV 992
Query: 228 VLNKKDLIKP--------GEIAKK---------LEWYEKFTDVDEVIPVSAKYGHGVEDI 270
LNK DL+ GE A + V+P+SA G GV+++
Sbjct: 993 ALNKVDLLGVDDDGYPLLGEAASRRVGSLDDAVARARAAVPGAAAVVPLSAATGAGVDEL 1052
Query: 271 RDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY---- 326
+ ++LP A + + ++ P RFF EIIREKI Q+ E+PY+C+V + +
Sbjct: 1053 ARALASELPESAALFDDEYFTDRPSRFFAAEIIREKILAQFAKEIPYSCEVRIDRFKEDL 1112
Query: 327 --KTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEV 384
K RP I ++V ++SQK IL+GK G A+K + AAR +E F KV+L + V
Sbjct: 1113 ELKGRPFVN--IDAAVLVARDSQKGILVGKRGAAIKAIGVAAREHLETFFDAKVHLALRV 1170
Query: 385 KVKENWRQDEGLLKHYGY 402
KV ++WR DEG LK GY
Sbjct: 1171 KVSKDWRADEGKLKAMGY 1188
>gi|407796185|ref|ZP_11143141.1| GTP-binding protein Era [Salimicrobium sp. MJ3]
gi|407019539|gb|EKE32255.1| GTP-binding protein Era [Salimicrobium sp. MJ3]
Length = 300
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKST N++IG+K++I+++K QTTR+RI G+ + + Q++ DTPGI + K
Sbjct: 11 AIVGRPNVGKSTFMNRVIGEKIAIMSDKAQTTRNRIQGVYTDEDSQIVFIDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L + M+ D I+ +++A + R D+ + + + + D+ P+ L++NK D
Sbjct: 70 HKLGNYMVNTAEQTLNEVDIILFMINAEEGYGRGDQFIVDRLKN-VDR-PVYLIINKIDR 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +E Y + + E++P+SA G+ V+ + I L GP YYP+D +++HP
Sbjct: 128 VHPDKLITLIEQYRELMEFTEIVPISALEGNNVDHLLTVIKGHLEEGPQYYPEDQITDHP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF + E IREK+ R E+P++ V + IQ IVVE+ SQK I+IGK
Sbjct: 188 ERFVISEFIREKVLHLTREEIPHSIAVKIEEIDEEENGSLHIQAIIVVERKSQKGIIIGK 247
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + T AR DIE L KV+LE+ VKV+++WR L +GY
Sbjct: 248 QGSMLKEVGTRARKDIEALLGSKVFLELWVKVQKDWRNRSIDLNDFGY 295
>gi|114564092|ref|YP_751606.1| GTP-binding protein Era [Shewanella frigidimarina NCIMB 400]
gi|114335385|gb|ABI72767.1| GTP-binding protein Era [Shewanella frigidimarina NCIMB 400]
Length = 334
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 169/291 (58%), Gaps = 4/291 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+GI + Q+I DTPG+ ++
Sbjct: 44 AIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRIMGIHTDGPSQIIFIDTPGLHIEEK 103
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ + ++ +VD DE++ + + D I+L +NK D
Sbjct: 104 RAINRLMNRAAASSLADVAMVIFVVDGMTWTAD-DEMVLQKIQHRNDDRKIILAINKVDN 162
Query: 235 IKPGE--IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
IK E E +KF D DE++P+SA G V+ I D LP P Y+P+D V++
Sbjct: 163 IKDKESLFPYLTELAKKF-DFDEILPISASKGTNVQRILDMARESLPEAPFYFPEDYVTD 221
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
+RF EI+REK+ +E+PY V + +K I I+VE+ QK ++I
Sbjct: 222 RSQRFMASEIVREKLMRFLGDELPYDATVEIEQFKMMENGVYQINALILVEREGQKRMVI 281
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G+ ++ +AT +RLD+E + KV+LE+ VKVK W DE L+ GYG
Sbjct: 282 GNKGERIRTIATQSRLDMETLFENKVFLEVWVKVKSGWADDERALRSLGYG 332
>gi|222152667|ref|YP_002561842.1| GTP-binding protein Era [Streptococcus uberis 0140J]
gi|254783667|sp|B9DRF9.1|ERA_STRU0 RecName: Full=GTPase Era
gi|222113478|emb|CAR41209.1| GTP-binding protein Era homolog [Streptococcus uberis 0140J]
Length = 299
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 182/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K +P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERLKNAK--IPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLISLLTDNLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + E+P++ V + S K + T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDQVTDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGSMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|359427855|ref|ZP_09218899.1| GTPase Era [Acinetobacter sp. NBRC 100985]
gi|358236746|dbj|GAB00438.1| GTPase Era [Acinetobacter sp. NBRC 100985]
Length = 346
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 47 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 106
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K + DE++ E + + +P++LV+NK D
Sbjct: 107 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVILVINKLDT 163
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E ++ K + E++PVSA G +E +RD I LP P Y D +++
Sbjct: 164 FENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYSLDQITDR 223
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT + +I I V
Sbjct: 224 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTYIDATIFV 283
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ QK I+IG G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 284 ERQGQKAIVIGDKGAKLKSIGMDARTDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 343
Query: 403 G 403
Sbjct: 344 S 344
>gi|325295030|ref|YP_004281544.1| GTP-binding protein Era-like-protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065478|gb|ADY73485.1| GTP-binding protein Era-like-protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 306
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 184/296 (62%), Gaps = 13/296 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKSTL N +G K++IVT+KPQTTRHRI+G+ + Q++ DTPGI ++K
Sbjct: 14 AILGRPNVGKSTLLNSFLGTKVAIVTDKPQTTRHRIIGVKHLKDAQIVFLDTPGIHKEKF 73
Query: 175 HMLDSMMMKNVRSAGI--NADCIVVLVDACKAPERIDEILEEGVGDHKDK-LPILLVLNK 231
+ M N + G+ +AD I+ L+DA +D+ + + +G+ K K +++V+NK
Sbjct: 74 ELNRYM---NEIAFGVIPDADIILFLIDARSGFTEVDKKILQKIGEEKRKDTKVIVVINK 130
Query: 232 KDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
D + E+ + E +++F V +++P+SA G ++ + D ++ LP GP YY ++
Sbjct: 131 IDGVPKEELLPLIDEIHKEFPFVSDIVPLSATRGTNLDRLLDLLVKYLPEGPKYYEDHML 190
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD----FIQVEIVVEKNS 346
++ P +V EIIREKI + R EVP+A V V++ +P KD I +IVVEK+S
Sbjct: 191 TDMPLEQYVAEIIREKIMLLTREEVPHAVTVQVLN--IQPGDKDPNMLVIDADIVVEKDS 248
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGKGG+ LK + AR ++E L K+VYL + VKVKE WR L+ GY
Sbjct: 249 QKAIVIGKGGQRLKRIGKLAREELEQLLGKRVYLRLWVKVKEGWRDRLDQLRGLGY 304
>gi|50085654|ref|YP_047164.1| GTP-binding protein Era [Acinetobacter sp. ADP1]
gi|49531630|emb|CAG69342.1| GTP-binding protein,16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ADP1]
Length = 345
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 173/301 (57%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 46 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVYVDTPGMHKKEV 105
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VD K + D +LE+ ++P++LV+NK D
Sbjct: 106 RAINKMMNRAAHSALRDVNLVLFVVDIHKWTQNDDLVLEKL---KNAEMPVILVINKVDT 162
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ + + ++ K + E+IPVSA G ++ +RD + LP P Y D +++
Sbjct: 163 LEDKKSLLPLIQERTKLMNFAEIIPVSALRGANLDQLRDTVEKYLPFQPPLYSLDQITDR 222
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKD----------FIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT PT + +I I V
Sbjct: 223 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEPTVSEKTGRLKPACTYIDATIFV 282
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ QK I+IG+ G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 283 ERAGQKAIVIGEKGAKLKRIGMEARTDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 342
Query: 403 G 403
Sbjct: 343 S 343
>gi|441504429|ref|ZP_20986423.1| GTP-binding protein Era [Photobacterium sp. AK15]
gi|441427896|gb|ELR65364.1| GTP-binding protein Era [Photobacterium sp. AK15]
Length = 301
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 176/296 (59%), Gaps = 5/296 (1%)
Query: 109 SHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
+H +++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ + DTPG
Sbjct: 5 THCGFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVYVDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
+ ++ ++ +M + S+ + + ++ LVD + + +L + K +LP +L+
Sbjct: 65 LHIEEKRTINRLMNRAASSSLTDVELVLFLVDGTMWTKDDEMVLNKLA---KAQLPTVLL 121
Query: 229 LNKKDLIKPG-EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK D +K E+ L+ + +V+PVSAK+G ++ + + LP G Y+P+
Sbjct: 122 VNKVDNVKDKHELFPHLQELSSKMEFVDVVPVSAKHGTNIDAVEKIVRDHLPEGEYYFPE 181
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 346
+ V++ +RF EIIREK+ +E+PY+ V + + P F I I+VE+
Sbjct: 182 EYVTDRSQRFMASEIIREKLMRFTGDELPYSITVEIERFDYNPDTDGFDINGLILVERKG 241
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK ++IGKGG +K + ARLD+E+ ++KVYLE+ VKVK W DE L+ GY
Sbjct: 242 QKKMVIGKGGDKIKTIGREARLDMEELFERKVYLELWVKVKSGWADDERALRSLGY 297
>gi|29349243|ref|NP_812746.1| GTP-binding protein Era [Bacteroides thetaiotaomicron VPI-5482]
gi|298384784|ref|ZP_06994343.1| GTP-binding protein Era [Bacteroides sp. 1_1_14]
gi|380693595|ref|ZP_09858454.1| GTPase Era [Bacteroides faecis MAJ27]
gi|383120154|ref|ZP_09940886.1| GTP-binding protein Era [Bacteroides sp. 1_1_6]
gi|29341151|gb|AAO78940.1| putative GTP-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837313|gb|EES65413.1| GTP-binding protein Era [Bacteroides sp. 1_1_6]
gi|298261928|gb|EFI04793.1| GTP-binding protein Era [Bacteroides sp. 1_1_14]
Length = 293
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 181/288 (62%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E + + + +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADVLLYVTDVVETPDKNNEFMGKV---RQMTVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ K +E +++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLIKLVEEWKELLPQAEIIPISAASKFNVDYVMKRIQELLPDSPPYFGKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
RFFV EIIREKI + Y E+PY+ +V V +K K I+ I VE++SQK I+IGK
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYSVEVVVEEFKEE-AKKIHIRAVIYVERDSQKGIIIGK 242
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKALK +AT AR ++E F K ++LE VKV ++WR + L+++GY
Sbjct: 243 QGKALKKVATEARRELERFFGKTIFLETYVKVDKDWRSSDKELRNFGY 290
>gi|168335124|ref|ZP_02693232.1| GTP-binding protein Era [Epulopiscium sp. 'N.t. morphotype B']
Length = 303
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 173/294 (58%), Gaps = 8/294 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+ NVGKSTL N+++G+K++I++NKPQTTRH++ I + ++Q + DTPGI
Sbjct: 11 SIIGRANVGKSTLMNRLVGEKIAIMSNKPQTTRHQVRTILTTNDFQAVFIDTPGIHTPNT 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD-KLPILLVLNKKD 233
L M+K + D I+ L++ RI ++ EE + K + L +NK D
Sbjct: 71 E-LGKFMVKAAHTTLNEVDIILFLIET---DTRIGKLDEEIISKLKSVNSAVFLCINKID 126
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
P E+ +E Y+ D EVIP+SA G V+ + I LP GP ++P+D++++
Sbjct: 127 GKDPQEVIDSIECYKDSMDFAEVIPISAYEGTNVDALIHCISKYLPAGPKFFPEDMITDE 186
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PER V E+IREK E+P+ + + S + R + D + +E I+ E+++ K I+
Sbjct: 187 PERQLVAELIREKALHLLDKEIPHGIAIEISSMRKRDKS-DMVDIEATIICERDAHKKII 245
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
IGK G+ +K + T AR DIE L K++L + VKVK+NWR E LLK+YGY +
Sbjct: 246 IGKNGQMIKSIGTHARRDIERLLGSKIFLSLWVKVKKNWRDSEFLLKNYGYSKE 299
>gi|254424176|ref|ZP_05037894.1| GTP-binding protein Era, putative [Synechococcus sp. PCC 7335]
gi|196191665|gb|EDX86629.1| GTP-binding protein Era, putative [Synechococcus sp. PCC 7335]
Length = 431
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 178/297 (59%), Gaps = 18/297 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++GQK++I + QTTR+R+ GI + P+ Q+I DTPGI K
Sbjct: 140 SIVGRPNVGKSTLMNYLVGQKIAITSPVAQTTRNRLQGILTTPQAQIIFVDTPGI-HKPH 198
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD- 233
H L ++++N R A + D ++ +V+A A + D + + K P++L +NK D
Sbjct: 199 HELGKVLVQNARVAIGSVDVVLFVVEATSAAGKGDLFVSNLIAQTKG--PVVLGINKVDQ 256
Query: 234 LIKPGEIAKKLEW-YEKFTDVD--EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
L + G A +++ YE V+ SA G G+E+++ ++ KL GP YYP D+V
Sbjct: 257 LPESGRKAAEIKHSYEALAAEHGWSVVKFSALTGEGIENLQTELVAKLEPGPYYYPPDLV 316
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYK-----TRPTAKDFIQVEIVVEKN 345
++ PERF +GE+IRE+I + R EVP++ + + + TR I + VE+
Sbjct: 317 TDQPERFIMGELIREQILLHTREEVPHSVAIAIEKVEEDKNITR------ILATVNVERK 370
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
SQK ILIGKGG +K ++TAAR ++ + KVYLEI V+V+E WRQ L +GY
Sbjct: 371 SQKGILIGKGGLMMKAISTAAREQMQKLVAGKVYLEIFVRVQERWRQSRTRLSEFGY 427
>gi|262368561|ref|ZP_06061890.1| GTP-binding protein Era [Acinetobacter johnsonii SH046]
gi|262316239|gb|EEY97277.1| GTP-binding protein Era [Acinetobacter johnsonii SH046]
Length = 342
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 176/301 (58%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 43 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSRAKSQAVFVDTPGMHKKEV 102
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ ++DA K + DE++ E + + ++P++LV+NK D
Sbjct: 103 RAINKMMNRAASSALRDVNLVLFVLDADKWTQN-DELVLEKLKNA--EMPVILVINKIDT 159
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ A L + K + E++PVSA G ++ +RD I LP P Y D +++
Sbjct: 160 LENKNHALPLIQERAKLMNFAEIVPVSALRGANLDHLRDTIEKYLPFQPPMYSLDQLTDR 219
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT----------RPT-AKDFIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT RP A +I I V
Sbjct: 220 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRPKPACTYIDATIFV 279
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ QK I+IG+ G LK + AR+D+E ++K+ L + VKVK W DE LK GY
Sbjct: 280 DRPGQKAIVIGEKGAKLKKIGMDARIDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 339
Query: 403 G 403
Sbjct: 340 S 340
>gi|294651021|ref|ZP_06728361.1| GTP-binding protein era family protein [Acinetobacter haemolyticus
ATCC 19194]
gi|292823122|gb|EFF81985.1| GTP-binding protein era family protein [Acinetobacter haemolyticus
ATCC 19194]
Length = 341
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 42 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 101
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K + DE++ E + + +P++LV+NK D
Sbjct: 102 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVILVINKLDT 158
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E ++ K + E++PVSA G +E +RD I LP P Y D +++
Sbjct: 159 FENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYSLDQITDR 218
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT + +I I V
Sbjct: 219 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTYIDATIFV 278
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ QK I+IG G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 279 ERQGQKAIVIGDKGAKLKSIGMDARADMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 338
Query: 403 G 403
Sbjct: 339 S 339
>gi|186681007|ref|YP_001864203.1| GTP-binding protein Era [Nostoc punctiforme PCC 73102]
gi|186463459|gb|ACC79260.1| GTP-binding protein Era [Nostoc punctiforme PCC 73102]
Length = 318
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 190/334 (56%), Gaps = 45/334 (13%)
Query: 94 MASPDDYEIEEFDYASH-------PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNK 142
M S D+Y F ++ P+ KS ++G+PNVGKSTL NQ++GQK++I +
Sbjct: 1 MTSIDNYN---FSFSGEVTIPQAPPDFKSGFIGIVGRPNVGKSTLMNQLVGQKIAITSPI 57
Query: 143 PQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD-- 200
QTTR+R+ GI + PE Q+I DTPG I K H L ++++N + A + D ++ +VD
Sbjct: 58 AQTTRNRLRGILTTPEAQLIFVDTPG-IHKPHHQLGEVLVQNAKIAIESVDVVLFVVDGA 116
Query: 201 -ACKAPER-IDEILEEGVGDHKDKLPILLVLNKKDLIKP----------GEIAKKLEWYE 248
AC + +R I E+L + K P++L +NK D +P ++A+ EW
Sbjct: 117 VACGSGDRYIAELLS------RSKTPVILGVNKTDQ-QPSDSQFLDDSYAQMAQSHEW-- 167
Query: 249 KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIF 308
E++ SAK G+ +++ ++ L +GP YYP D++++ PERF +GE+IRE+I
Sbjct: 168 ------EIVKFSAKTSAGLPQLQELLIEHLEIGPLYYPPDLITDQPERFIMGELIREQIL 221
Query: 309 MQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARL 368
+ R EVP++ + + + P+ + I VE++SQK ILIGKGG LK + + AR
Sbjct: 222 LLTREEVPHSVAIAIDLVEETPSITRVL-ATINVERDSQKGILIGKGGAMLKAIGSEARE 280
Query: 369 DIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+ + KVYLE+ VKV+ WRQ L GY
Sbjct: 281 QIQKLIAGKVYLELFVKVQPKWRQSRISLAELGY 314
>gi|169832185|ref|YP_001718167.1| GTP-binding protein Era [Candidatus Desulforudis audaxviator
MP104C]
gi|169639029|gb|ACA60535.1| GTP-binding protein Era [Candidatus Desulforudis audaxviator
MP104C]
Length = 308
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 170/289 (58%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+K++I+++KPQTTRHRI + + + Q++ DTPGI + K
Sbjct: 20 TIIGRPNVGKSTLLNSLVGRKVAIISDKPQTTRHRIRAVLTRDDAQVVFVDTPGIHKPK- 78
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKLPILLVLNKKD 233
H L MM+ + D I+ L++A + D+ ILE G + P+ LV+NK D
Sbjct: 79 HRLGRMMVDTALKTLQDVDLILFLIEAHRESGPGDDFILERLAGI---RTPVFLVINKID 135
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
L+ + ++ K E+IP+SA+ G + D ++ LP GP YYP+D VS+
Sbjct: 136 LVAKPRLLPLIDEMRKKMAFREIIPLSARTGENTGLLVDLVIGCLPPGPRYYPEDAVSDQ 195
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
E + E++REK+ EVP++ V V I+ +++VE+ SQK ILIG
Sbjct: 196 AEEVILAELVREKVLHLTTQEVPHSVAVVVEEVFPGQKGVTVIRADVIVERESQKAILIG 255
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+GG+ LK + AR +IE L +VYLE+ VKVK WRQDE L + G+
Sbjct: 256 EGGRMLKSIGRLAREEIESLLGMRVYLELWVKVKPKWRQDERQLHYLGF 304
>gi|313895890|ref|ZP_07829444.1| ribosome biogenesis GTPase Era [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975315|gb|EFR40776.1| ribosome biogenesis GTPase Era [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 298
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 171/297 (57%), Gaps = 17/297 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTPG+ + K
Sbjct: 10 AVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTQEDAQVIFLDTPGVHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L S M K A + V+V A E++ G G+ K ++P+LL
Sbjct: 69 HKLGSHMAKATEGA---LHGVDVVVFVVDATEKM------GAGEQYILKQLEKVRVPVLL 119
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK DL++ E + Y K D ++P+SA+ + + D I LP GP YYP+
Sbjct: 120 AVNKIDLLRREETLPIIAGYAKTYDFAGIVPISARAEENLAGLLDEIKKHLPEGPRYYPE 179
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D+V++ PER + E++REK R+E+P+A V++ TR +++ I VE+ SQ
Sbjct: 180 DMVTDQPERLIIAELVREKALELTRDEIPHAVAVDIEEITTRAKGDVYVRAVIYVERESQ 239
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
K I+IG G L+ + AR DIE L KVYL++ VK + +WR E L+ +G G
Sbjct: 240 KGIVIGARGALLRTIGARARADIETLLGAKVYLDLWVKTRRDWRNRESALREFGLSG 296
>gi|373460998|ref|ZP_09552746.1| GTP-binding protein Era [Prevotella maculosa OT 289]
gi|371954076|gb|EHO71894.1| GTP-binding protein Era [Prevotella maculosa OT 289]
Length = 312
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 178/292 (60%), Gaps = 11/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 27 NIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDCQIVFSDTPGVLKPNY 86
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNK--- 231
M MM+ SA +AD ++ + D + PE+ + L++ K +P+LL++NK
Sbjct: 87 KM-QEMMLAFSESALKDADILLYVTDVVENPEKNLDFLDKV---RKMAIPVLLLINKIDE 142
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D G+I + W+ + E++P+SAK GV+ + I LP PAY+ K+ ++
Sbjct: 143 SDQKTLGDIVTR--WHALLPNA-EILPLSAKNKFGVDILLKRIKELLPESPAYFDKEQLT 199
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ P RFFV EIIREKI + Y E+PY+ +V V +K T K + I VE++SQK I+
Sbjct: 200 DKPARFFVSEIIREKILLYYDKEIPYSVEVRVERFKEDDT-KIHVNAIIYVERDSQKGII 258
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
IG G ALK + T +R +E F KK++LE VKV ++WR + L ++GY
Sbjct: 259 IGHQGVALKKVNTESRKTLERFFGKKIFLETFVKVDKDWRSSQRELDNFGYN 310
>gi|163802959|ref|ZP_02196846.1| GTP-binding protein Era [Vibrio sp. AND4]
gi|159173249|gb|EDP58077.1| GTP-binding protein Era [Vibrio sp. AND4]
Length = 320
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 185/329 (56%), Gaps = 19/329 (5%)
Query: 76 EFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQK 135
EFD + F S E ++SP++ H +++G+PNVGKSTL N+++GQK
Sbjct: 5 EFDIDAFFASNGE-----VSSPEN---------QHCGFIAIVGRPNVGKSTLLNKILGQK 50
Query: 136 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 195
+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + +
Sbjct: 51 ISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLV 110
Query: 196 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVD 254
LVD + +L + K P++L +NK D ++ E+ + + K D
Sbjct: 111 FFLVDGTHWTNDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMQHMMEMSKRMDFV 167
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 314
+V+P+SAK+G +E +R + LP ++P++ V++ +RF EI+REK+ E
Sbjct: 168 DVVPISAKHGKNIEVLRKHVRDHLPEATHHFPEEYVTDRSQRFMASEIVREKLMRFTGEE 227
Query: 315 VPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDF 373
+PY+ V + + P F I I+VE++ QK ++IGKGG+ +K + ARLD+E+
Sbjct: 228 LPYSVTVEIERFDYNPDTDGFHINALILVERHGQKKMVIGKGGEKIKTIGREARLDMEEL 287
Query: 374 LQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+KVYLE VKVK W DE L+ GY
Sbjct: 288 FGRKVYLETWVKVKSGWADDERALRSLGY 316
>gi|443312359|ref|ZP_21041977.1| GTP-binding protein Era [Synechocystis sp. PCC 7509]
gi|442777597|gb|ELR87872.1| GTP-binding protein Era [Synechocystis sp. PCC 7509]
Length = 324
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 179/306 (58%), Gaps = 26/306 (8%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P KS ++G+PNVGKSTL N ++GQK++I + QTTR+R+ GI + PE Q+I DT
Sbjct: 27 PGFKSGFIGIIGRPNVGKSTLMNYLVGQKIAITSPVAQTTRNRLRGILTTPEAQLIFVDT 86
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------- 219
PGI K H L ++++N R A + D ++ +VD +E G GD
Sbjct: 87 PGI-HKPHHQLGEVLVQNARIAIDSVDVVLFVVDGG---------VEAGGGDRYIVDILS 136
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEW-YEKFTDVD--EVIPVSAKYGHGVEDIRDWILT 276
+ + P++L +NK D +P + A+ L+ Y + + + +++ SA G G+ D++ ++
Sbjct: 137 QSQTPVILGINKID-TQPADDAQMLDTTYARVAEANNWKMVKFSALTGDGLVDLQQLLVE 195
Query: 277 KLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFI 336
KL LGP YYP D+V++ PERF +GE+IRE+I + R EVP++ + + PT
Sbjct: 196 KLELGPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIEKVVEEPTITRVF 255
Query: 337 QVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGL 396
I +E++SQK ILIGKGG LK + +AAR I+ + KV+LE+ VKV+ WRQ
Sbjct: 256 -AAINIERDSQKGILIGKGGSMLKAIGSAAREQIQKLIAGKVHLELFVKVQPKWRQSRTR 314
Query: 397 LKHYGY 402
L GY
Sbjct: 315 LAELGY 320
>gi|71280742|ref|YP_270776.1| GTP-binding protein Era [Colwellia psychrerythraea 34H]
gi|71146482|gb|AAZ26955.1| GTP-binding protein Era [Colwellia psychrerythraea 34H]
Length = 305
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 168/290 (57%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK+SI + KPQTTRHRILGI + Q +L DTPG+ ++
Sbjct: 14 AIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPGLHTEEK 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ + I+ LV+ + DE++ V + P +LV+NK D
Sbjct: 74 RAINRLMNRAASSSIAEVELIMFLVEGTHWTKD-DELVLSKV--KQSGTPCILVVNKTDN 130
Query: 235 I-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
I E+ L+ D +++P+ A GHGV+ IR LT LP G ++P+D +++
Sbjct: 131 IPDKDELLPHLQKLGAMHDFRDIVPICATKGHGVDTIRQLCLTSLPEGVFWFPEDHITDR 190
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ +E+PY+ V + +K I I+VE++SQK ++IG
Sbjct: 191 SSRFMASEIIREKLIRFTGDELPYSITVEIEQFKMDDKGIIHINALILVERDSQKRMVIG 250
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ LK + AR D+E+ + KV+LE VKVK W DE L+ GYG
Sbjct: 251 NKGERLKTIGQEARRDMENLFESKVFLETWVKVKSGWADDERALRSLGYG 300
>gi|169331621|ref|ZP_02860814.1| hypothetical protein ANASTE_00005 [Anaerofustis stercorihominis DSM
17244]
gi|169259683|gb|EDS73649.1| ribosome biogenesis GTPase Era [Anaerofustis stercorihominis DSM
17244]
Length = 302
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 175/294 (59%), Gaps = 12/294 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+ NVGKSTL N ++GQK+SIV+N+PQTTR+ I I + QM+ DTPG + K
Sbjct: 11 SIVGRTNVGKSTLLNLLLGQKISIVSNRPQTTRNNIRCIRTTGTSQMVFIDTPGFHKPKS 70
Query: 175 HMLDSMMMKNVRSAGIN---ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
+ D M V AG + D I+ LV+ + DE L E + K+K P++LV+NK
Sbjct: 71 KLSDYM----VEVAGESYKEVDVILFLVEEDTTIGKGDEFLIEKL--KKEKTPVILVINK 124
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D I EI K++ YEK+ + E++P+SA G + ++ + I LP GP Y+P+D+V+
Sbjct: 125 IDKITKEEILGKIKLYEKYDFIKEIVPISAMKGENINELVEVIEKYLPQGPMYFPEDMVT 184
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEIVVEKNSQKI 349
+ ERF + E+IREKI + E+P+ V V+ K R KD I+ I E+ + K
Sbjct: 185 DRSERFVISELIREKILRSLKEEIPHGTAVEVMLMKKR-NNKDLYDIEANIYTERENHKR 243
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
I+IGK G LK + + +R +IE+ L KV L++ VKVK+ WR + +L GY
Sbjct: 244 IIIGKNGSMLKKIGSDSRREIEEMLGTKVNLKLWVKVKDEWRDKQNILNSLGYN 297
>gi|226951499|ref|ZP_03821963.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ATCC 27244]
gi|226837792|gb|EEH70175.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ATCC 27244]
Length = 341
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 42 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 101
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K + DE++ E + + +P++LV+NK D
Sbjct: 102 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVILVINKLDT 158
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E ++ K + E++PVSA G +E +RD I LP P Y D +++
Sbjct: 159 FENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYSLDQITDR 218
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT + +I I V
Sbjct: 219 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTYIDATIFV 278
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ QK I+IG G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 279 ERQGQKAIVIGDKGAKLKSIGMDARADMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 338
Query: 403 G 403
Sbjct: 339 S 339
>gi|254507481|ref|ZP_05119615.1| GTP-binding protein Era [Vibrio parahaemolyticus 16]
gi|219549551|gb|EED26542.1| GTP-binding protein Era [Vibrio parahaemolyticus 16]
Length = 325
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 190/342 (55%), Gaps = 32/342 (9%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD +F S + KP ++P++ H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFD-IDAFFSSNNKP---ASTPEN---------QHCGFVAIVGRPNVGKSTLLN 49
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
+++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 50 RILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSL 109
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD--------LIKPGEIA 241
+ + + LVD + +L + K P++L +NK D ++ E++
Sbjct: 110 SDVNLVFFLVDGTHWTADDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNDVMLHMMEMS 166
Query: 242 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 301
KK+E+ +V+P+SAK+G ++ +R + LP ++P++ V++ +RF E
Sbjct: 167 KKMEFV-------DVVPISAKHGKNIDVLRKHVREHLPKATHHFPEEYVTDRSQRFMASE 219
Query: 302 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALK 360
I+REK+ E+PY+ V + + P F I I+VE++ QK ++IGKGG+ +K
Sbjct: 220 IVREKLMRFTGEELPYSVTVEIERFDYNPETDGFHINALILVERSGQKKMVIGKGGEKIK 279
Query: 361 LLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ ARLD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 280 TIGREARLDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 321
>gi|194335605|ref|YP_002017399.1| GTP-binding protein Era [Pelodictyon phaeoclathratiforme BU-1]
gi|194308082|gb|ACF42782.1| GTP-binding protein Era [Pelodictyon phaeoclathratiforme BU-1]
Length = 306
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 8/294 (2%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G PN GKSTL N+++ KLSIVT KPQTTR +I GI + Q+I DTPGI++ +
Sbjct: 13 IIGPPNAGKSTLLNELLDYKLSIVTPKPQTTRKKITGIYHNEKCQIIFLDTPGIMKPQQK 72
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKL--PILLVLNKK 232
+ +SM+ +R +AD ++ L+ + D EE G+ P++ VLNK
Sbjct: 73 LHESML-GVIRDTLKDADVVIALLPFSGKKDFFDRPFAEELFGNWLKPAGKPVIAVLNKC 131
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DL+ + + K + V+ VSA + + + I LPL YP+D +S
Sbjct: 132 DLVSAERQEEAEAFVRKSWNPAAVLSVSALKATNLPQLIETIQPFLPLDYPLYPEDTLST 191
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNV----VSYKTRPTAKDFIQVEIVVEKNSQK 348
PERFFV EIIREKIF+ Y EVPY+ +V + Y+ PT KD I+ ++VE+ +QK
Sbjct: 192 APERFFVSEIIREKIFLLYGREVPYSTEVVIDEFREQYENDPTRKDLIRCSVIVERETQK 251
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIG G ALK L AR DIE+ L + V+LE+ +KV+ +WR+++ LK YGY
Sbjct: 252 QILIGSKGAALKKLGQTARKDIEEMLGRPVFLELFIKVRPDWRKNQNFLKSYGY 305
>gi|406039702|ref|ZP_11047057.1| GTPase Era [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 349
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 172/302 (56%), Gaps = 17/302 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 50 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 109
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K + DE++ E + + ++P++LV+NK D
Sbjct: 110 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--EMPVILVINKLDT 166
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E + K + E++PVSA G ++ +RD I LP P Y D +++
Sbjct: 167 FENKNEALPLIRERAKLMNFAEIVPVSALRGANLDHLRDTIEKYLPFQPPLYSMDQITDR 226
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT------------RPTAKDFIQVEIV 341
ERF EIIREKI Q E+PY V + S+KT +P A +I I
Sbjct: 227 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEETISEKTGRLKP-ACTYIDATIF 285
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
VE+ QK I+IG G LK + AR D+E ++K+ L + VKVK W DE LK G
Sbjct: 286 VERAGQKAIVIGDKGAKLKRIGMEARTDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLG 345
Query: 402 YG 403
Y
Sbjct: 346 YS 347
>gi|399889914|ref|ZP_10775791.1| GTPase Era [Clostridium arbusti SL206]
Length = 297
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV++KPQTTR+ I I + + Q+I DTPGI + K
Sbjct: 8 TIIGRPNVGKSTLLNYIMGEKLSIVSSKPQTTRNNIQTILTAKDSQLIFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
HML M+K + + D IV + R DE + E + + +P+ LV+NK D
Sbjct: 67 HMLGEYMVKLATDSFKDVDLIVFVTTPDVIMGRGDEFILEQLKELN--IPVFLVVNKIDE 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+A+ L+ Y + + E+IP+SA G V+ + + ++ +P GP YYP+D++++
Sbjct: 125 TTNERLAQTLKNYSEKFNFKEIIPISAYKGKNVDKLIEIMIGNMPEGPQYYPEDMLTDVQ 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V EIIREK +EVP+ V ++S K I+ + EKNS K I+IGK
Sbjct: 185 ERFVVSEIIREKALRLLSDEVPHGIAVEIMSMKQNDKGVYNIEATLFCEKNSHKGIIIGK 244
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK ++ +R DIE+FL+ KV L+I VKVK+ WR + LL GY
Sbjct: 245 SGNMLKKISKYSREDIEEFLKVKVNLKIWVKVKKEWRDNPFLLNELGY 292
>gi|323491197|ref|ZP_08096383.1| GTPase Era [Vibrio brasiliensis LMG 20546]
gi|323314565|gb|EGA67643.1| GTPase Era [Vibrio brasiliensis LMG 20546]
Length = 325
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 190/342 (55%), Gaps = 32/342 (9%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD + F S +E+ +SP++ H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFDIDAFFSSNTEQA----SSPEN---------QHCGFVAIVGRPNVGKSTLLN 49
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
+++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 50 RILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSL 109
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD--------LIKPGEIA 241
+ + + LVD + +L + K P++L +NK D ++ E++
Sbjct: 110 SDVNLVFFLVDGTHWTSDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNDVMLHMMEMS 166
Query: 242 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 301
KK+E+ +V+P+SAK+G ++ +R + LP ++P++ V++ +RF E
Sbjct: 167 KKMEFV-------DVVPISAKHGKNIDVLRKHVREHLPKATHHFPEEYVTDRSQRFMASE 219
Query: 302 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALK 360
I+REK+ E+PY+ V + + P F I I+VE++ QK ++IGKGG+ +K
Sbjct: 220 IVREKLMRFTGEELPYSVTVEIERFDYNPETDGFHINALILVERHGQKKMVIGKGGEKIK 279
Query: 361 LLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ ARLD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 280 TIGREARLDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 321
>gi|300853996|ref|YP_003778980.1| ras-like GTP-binding protein [Clostridium ljungdahlii DSM 13528]
gi|300434111|gb|ADK13878.1| predicted ras-like GTP-binding protein [Clostridium ljungdahlii DSM
13528]
Length = 293
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 171/295 (57%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+ +PQTTR+ I I + ++Q++ DTPGI + K
Sbjct: 8 TIIGRPNVGKSTLLNNIMGEKLSIVSCRPQTTRNSIQTILTEDDFQLVFVDTPGIHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILL 227
H L M+K + + D ++ L PE LE G GD K +P+ L
Sbjct: 67 HKLGDYMVKAAEDSIKDVDLVLFLT----TPE-----LEPGKGDLYILEELKKCNVPVFL 117
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
VLNK D +A+ L+ Y + EVIP+SA VE++ D ++ +P GP YYP
Sbjct: 118 VLNKIDENPEQRVAETLKNYSAIFNFVEVIPISALKKKNVEELIDLMVKYMPEGPKYYPD 177
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D++++ E+F V EIIREK EVP+ V + S K I+ ++ EK+S
Sbjct: 178 DMITDKQEKFIVSEIIREKALRLLSKEVPHGIAVEIDSMKKDSKGIYNIEATLLCEKDSH 237
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGK G LK ++T AR DIE FL +VYL++ VKVK+ WR + LLK GY
Sbjct: 238 KGIIIGKNGAMLKKISTYARKDIEKFLDTRVYLKVWVKVKKEWRDSDRLLKELGY 292
>gi|393789431|ref|ZP_10377552.1| GTP-binding protein Era [Bacteroides nordii CL02T12C05]
gi|392650879|gb|EIY44545.1| GTP-binding protein Era [Bacteroides nordii CL02T12C05]
Length = 293
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 182/289 (62%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG+++
Sbjct: 8 NIVGNPNVGKSTLMNVLVGERVSIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGVLKPNY 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL++NK DL
Sbjct: 68 KLQESMLNFST-SALTDADILLYVTDVIETPDKNNEFVEKV---RQMTVPVLLLINKIDL 123
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ + +E ++ E+IP+SA V+ + I LP P Y+ KD ++ P
Sbjct: 124 TDQEKLVELVEDWKTLLPQAEIIPISATSKFNVDYVMKRIKELLPDSPPYFEKDQWTDKP 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
RFFV EIIREKI + Y E+PYA +V V +K AK I+ I VE++SQK I+IG
Sbjct: 184 ARFFVNEIIREKILLYYDKEIPYAVEVVVEEFKE--EAKMIHIRAIIYVERDSQKGIIIG 241
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K GK+LK +AT AR D+E F K V+LE VKV ++WR + L+++GY
Sbjct: 242 KQGKSLKKVATEARRDLERFFGKTVFLETYVKVDKDWRSSDKELRNFGY 290
>gi|389721527|ref|ZP_10188279.1| GTPase Era [Acinetobacter sp. HA]
gi|388608823|gb|EIM38019.1| GTPase Era [Acinetobacter sp. HA]
Length = 342
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 171/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 43 AIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 102
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K D +LE+ +P++LV+NK D
Sbjct: 103 RAINKMMNRAAHSALRDVNLVLFVVDADKWTPNDDLVLEKL---KNADMPVILVINKIDT 159
Query: 235 IKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
++ A L + K + E++PVSA G +E +R I LP P Y D +++
Sbjct: 160 LENKNHALPLIQERAKLMNFAEIVPVSALRGANLEHLRTTIANYLPFQPPLYSLDQLTDR 219
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPT----------AKDFIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT PT A +I I V
Sbjct: 220 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEPTLNEKTGRMKPACTYIDATIFV 279
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ QK I+IG+ G LK + AR+D+E ++K+ L + VKVK W DE LK GY
Sbjct: 280 DRAGQKAIVIGEKGSKLKKIGMDARVDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 339
Query: 403 G 403
Sbjct: 340 S 340
>gi|402756388|ref|ZP_10858644.1| GTPase Era [Acinetobacter sp. NCTC 7422]
Length = 341
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 42 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 101
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K + DE++ E + + ++P++LV+NK D
Sbjct: 102 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--EMPVILVINKLDT 158
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E + K + E++PVSA G +E +RD I LP P Y D +++
Sbjct: 159 FENKNEALPLIRERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYSLDQITDR 218
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT + +I I V
Sbjct: 219 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTYIDATIFV 278
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ QK I+IG G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 279 ERQGQKAIVIGDKGAKLKSIGMDARADMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 338
Query: 403 G 403
Sbjct: 339 S 339
>gi|427717662|ref|YP_007065656.1| GTP-binding protein Era-like-protein [Calothrix sp. PCC 7507]
gi|427350098|gb|AFY32822.1| GTP-binding protein Era-like-protein [Calothrix sp. PCC 7507]
Length = 324
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 29/300 (9%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DTPG I K H
Sbjct: 37 IIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGILTTPEAQLIFVDTPG-IHKPHH 95
Query: 176 MLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDKLPILLVLNK 231
L +++KN + A + D ++ +VD AC +R I E+L + + P++L LNK
Sbjct: 96 QLGEVLVKNAKIAIESVDVLLFVVDGTVACGTGDRFIAELLS------RSQTPVILGLNK 149
Query: 232 KDLIKP---------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 282
D P ++A+ +W + + SAK G G+ ++++ + L GP
Sbjct: 150 IDQQPPDSQPIDDSYAQLAESHQW--------QTVKFSAKTGTGLPELQELLTEHLEQGP 201
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP D+V++ PERF +GE+IRE+I + R EVP++ + + + P+ + I V
Sbjct: 202 YYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDLVEETPSITRVLAT-INV 260
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK ILIGKGG LK + + AR I+ + KVYLE+ VKV+ WRQ L GY
Sbjct: 261 ERDSQKGILIGKGGSMLKAIGSTAREQIQKLIAGKVYLELFVKVQPKWRQSRISLAELGY 320
>gi|304438431|ref|ZP_07398371.1| GTP-binding protein Era [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368514|gb|EFM22199.1| GTP-binding protein Era [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 298
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 170/299 (56%), Gaps = 13/299 (4%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
HKS V+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTP
Sbjct: 3 THKSGFVAVVGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTEKDAQIIFLDTP 62
Query: 168 GIIEKKIHMLDSMMMKNVRSA---GINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 224
GI K L S M K A +V + + A ER IL + H P
Sbjct: 63 GI-HKPQDALGSYMAKATEGALRGVDVVVFVVDVTEKMGAGERY--ILVQLAQVHA---P 116
Query: 225 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 284
+LL +NK D I E + Y K D ++P+SA+ + + D I KLP GP Y
Sbjct: 117 VLLAVNKIDRIPREESLPVIASYAKAYDFAAIVPISAREEENLTGLVDEIKEKLPEGPQY 176
Query: 285 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 344
YP+D+V++ PER + E++REK+ R+EVP+A V++ TRP +I+ I VE+
Sbjct: 177 YPEDMVTDQPERLIIAELVREKVLELTRDEVPHAVAVDIEEMTTRPKGDVYIRAVIYVER 236
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
SQK I+IG G L+ + AR D+E L K YL++ VKV+++WR G L+ +G+
Sbjct: 237 RSQKGIIIGTRGALLRTIGQRARADVETLLGAKAYLDLWVKVRKDWRSKTGALRDFGFA 295
>gi|326803486|ref|YP_004321304.1| ribosome biogenesis GTPase Era [Aerococcus urinae ACS-120-V-Col10a]
gi|326650900|gb|AEA01083.1| ribosome biogenesis GTPase Era [Aerococcus urinae ACS-120-V-Col10a]
Length = 303
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 179/309 (57%), Gaps = 12/309 (3%)
Query: 94 MASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGI 153
M +P++Y H +++G+PNVGKSTL N +IGQK++I+++K QTTR++I I
Sbjct: 1 MFNPNNY---------HSGFVAIVGRPNVGKSTLLNHIIGQKVAIMSDKAQTTRNKIHAI 51
Query: 154 CSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILE 213
+ E Q++ DTPGI + K H L M+K+ SA + I++LV++ + D +
Sbjct: 52 YTTDEVQIVFIDTPGIHKPK-HELGEYMVKSAYSALDEVEVILMLVNSTEKIGPGDRFIM 110
Query: 214 EGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDW 273
E + + P +L +NK D + ++A LE D++IP+SA G V+ +
Sbjct: 111 EKIAAYN--TPKILAVNKTDQLDKEDLAAYLESIPNKDIFDQIIPLSALTGDNVDQLLKE 168
Query: 274 ILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK 333
+ ++PLGP YYP+D V++HPE F V E+IRE+I R E+P++ V V + K
Sbjct: 169 LTKEMPLGPQYYPEDQVTDHPEYFVVSEMIREQILQLTREEIPHSVAVTVDKMQKDEYDK 228
Query: 334 DFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQD 393
+ I+VE+ SQK I+IGK G +K + + AR +IE L K +LE+ VKV+ +WR
Sbjct: 229 VHVYANIIVERKSQKGIIIGKNGSMIKRIGSNARREIETMLGSKAFLELWVKVQPHWRDK 288
Query: 394 EGLLKHYGY 402
LL +GY
Sbjct: 289 RNLLNDFGY 297
>gi|339497569|ref|ZP_08658545.1| GTPase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 303
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 172/289 (59%), Gaps = 3/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+ K
Sbjct: 12 AIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K+ SA AD I + DA R D+ + E + + K+ PI L++NK DL
Sbjct: 71 NSLGDFMVKSAFSALHEADAIWFVADASMPRGRGDDFIIERLKEVKNT-PIYLLINKIDL 129
Query: 235 IKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P ++ + Y E + EV P+SA G V ++ D I+ L GP Y+ D +++H
Sbjct: 130 LSPKDLLNVIASYQENAPEWTEVFPISATEGDNVPELLDNIVANLDEGPQYFDSDQLTDH 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK I+IG
Sbjct: 190 PERFVIGELIREKVLQLTRQEVPHSVAVVIDKIAREDEEKIHIQASIIVERPTQKNIIIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G +K + T AR DIE + KVYLE VKV+ WR L+ GY
Sbjct: 250 KQGAMIKQIGTRARKDIERLMGDKVYLETWVKVEPRWRDRPQALQTLGY 298
>gi|358012514|ref|ZP_09144324.1| GTPase Era [Acinetobacter sp. P8-3-8]
Length = 342
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 182/320 (56%), Gaps = 18/320 (5%)
Query: 96 SPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICS 155
S + +EI DY S +++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S
Sbjct: 27 SSEGFEIPS-DYRS--GFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDS 83
Query: 156 GPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEG 215
+ Q + DTPG+ +K++ ++ MM K SA + + ++ +VDA K D +LE+
Sbjct: 84 RAKSQAVFVDTPGMHKKEVRAINKMMNKAAHSALRDVNLVLFVVDAQKWTPNDDLVLEKL 143
Query: 216 VGDHKDKLPILLVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWI 274
++P++LV+NK D ++ + L + K + E++PVSA G ++ +R+ I
Sbjct: 144 ---KNAEMPVVLVINKIDTLENKRLILPLIQERAKLMNFAEIVPVSALRGANLDHLREAI 200
Query: 275 LTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT------ 328
LP P Y + +++ ERF EIIREKI Q E+PY V + S+KT
Sbjct: 201 EKYLPFQPPLYSLEQLTDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATIN 260
Query: 329 ----RPTAK-DFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIE 383
RP A +I I V+++ QK I+IG+ G LK + AR+D+E ++K+ L +
Sbjct: 261 EKTGRPKAACTYIDATIFVDRSGQKAIVIGEKGAKLKKIGMDARVDMEKMFEQKIMLTLW 320
Query: 384 VKVKENWRQDEGLLKHYGYG 403
VKVK W DE LK GY
Sbjct: 321 VKVKGGWSDDERALKSLGYS 340
>gi|302874334|ref|YP_003842967.1| GTP-binding protein Era [Clostridium cellulovorans 743B]
gi|307689399|ref|ZP_07631845.1| GTP-binding protein Era [Clostridium cellulovorans 743B]
gi|302577191|gb|ADL51203.1| GTP-binding protein Era [Clostridium cellulovorans 743B]
Length = 296
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 174/289 (60%), Gaps = 5/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+KLSIV+ +PQTTR+ I I + ++Q+I DTPG+ + K
Sbjct: 8 AIIGRPNVGKSTLMNNLMGEKLSIVSPRPQTTRNNIQTILTKKDFQIIFVDTPGMHKPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKLPILLVLNKKD 233
H L MMK+V + + D +V + A D+ ILE+ + K LV+NK D
Sbjct: 67 HKLGEFMMKSVSDSLKDVDLVVFMTTADGELGPGDKHILEDLKKVNSKKF---LVVNKID 123
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
K +A+ L+ + + DE+IP+SA G + + + ++ LP GP YYP+D++++
Sbjct: 124 ETKAETVAETLQVVGELVEFDEIIPISALNGKNTDKLLELMVDYLPEGPMYYPEDMITDA 183
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V EIIREK EVP+ V +VS K I V ++ EK+S K I++G
Sbjct: 184 QERFIVSEIIREKALRLLSQEVPHGIAVEIVSMKQDKKNTYHIDVNMICEKDSHKGIIVG 243
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG +K +AT AR DIE L +KV L++ VKV++ WR + LL+ GY
Sbjct: 244 KGGLMMKKIATYAREDIEKLLGEKVDLKVWVKVRKEWRDNPNLLRELGY 292
>gi|357639006|ref|ZP_09136879.1| GTP-binding protein Era [Streptococcus urinalis 2285-97]
gi|418418165|ref|ZP_12991356.1| GTPase Era [Streptococcus urinalis FB127-CNA-2]
gi|357587460|gb|EHJ56868.1| GTP-binding protein Era [Streptococcus urinalis 2285-97]
gi|410869264|gb|EKS17227.1| GTPase Era [Streptococcus urinalis FB127-CNA-2]
Length = 299
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDNEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIMERL--KAAKVPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EVI +SA G+ VE + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFKEVILISALQGNNVETLLQVLKDNLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REKI EVP++ V V S K P T K I+V I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKILKLTEQEVPHSVAVVVDSMKRDPETDKVHIRVTIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|392552208|ref|ZP_10299345.1| GTP-binding protein Era [Pseudoalteromonas spongiae UST010723-006]
Length = 308
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 177/296 (59%), Gaps = 4/296 (1%)
Query: 109 SHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
+H +++G+PNVGKSTL N+++ QK+SI + KPQTTRHRI+GI + +YQ + DTPG
Sbjct: 14 THCGMIAIVGRPNVGKSTLLNRLVEQKVSITSRKPQTTRHRIMGIHTEGKYQAVYVDTPG 73
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
+ ++ ++ +M + S+ + + I+ +V+ + + + +L + +G +P++L
Sbjct: 74 LHSEEKRAINRLMNRAASSSIGDVELIIFVVEGTRWTDDDEMVLTKVMGS---GVPVILA 130
Query: 229 LNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK+D +K E + L+W + ++IP+SAK+G VE I+ + LP Y+P+
Sbjct: 131 INKEDNVKEKEELLPHLQWLATKGNFLDMIPISAKHGKRVEQIKQHVHNTLPQCEFYFPE 190
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D V++ RF E+IREK+ +E+PY+ V + +K I I+VE+ +Q
Sbjct: 191 DYVTDRSMRFLAAEVIREKLMRFMGDELPYSVTVEIEQFKWMDNGVWQINGLILVERQTQ 250
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K ++IG G+ LK++ AR D+ED L KV+LE+ VKVK W DE L+ GYG
Sbjct: 251 KRMVIGNKGEKLKVIGREARKDLEDMLDNKVFLELWVKVKSGWADDERALRSLGYG 306
>gi|299144155|ref|ZP_07037235.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518640|gb|EFI42379.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 296
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 176/290 (60%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK+S ++NK QTTR++I I + + Q+I DTPGI K
Sbjct: 8 TIIGRPNVGKSTLLNCIVGQKISAISNKAQTTRNKITFIYTDEKMQVIFLDTPGIQMPK- 66
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K S D I +VD K ++D + + + + K PI+L++NK D
Sbjct: 67 NKLGDYMLKVSESTLSEVDVITYIVDCSKKIGKLDNYIIKELKEKNLKTPIVLLVNKIDE 126
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ E+ + ++ Y+ E+IP+SA GVE + +P+GP YYP+D+V++HP
Sbjct: 127 VAKEELFEIIKMYDDIGIFKEIIPISALKNDGVESYLKTLAKYIPIGPMYYPEDMVTDHP 186
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
E+F VGEIIREK E+P+ V++ + R K+ +E I +E+ S K I+I
Sbjct: 187 EKFIVGEIIREKALRFLDEEIPHGIAVSIEKMRERK-EKEITDIEAVIYIERESHKKIVI 245
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G+ LK + +AAR +IE+ L KV L + VKV++NWR + +K++GY
Sbjct: 246 GKNGQMLKKIGSAARTEIENLLDTKVNLNLWVKVEKNWRDLDNKVKYFGY 295
>gi|425746281|ref|ZP_18864311.1| GTP-binding protein Era [Acinetobacter baumannii WC-323]
gi|425486158|gb|EKU52530.1| GTP-binding protein Era [Acinetobacter baumannii WC-323]
Length = 342
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 169/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 43 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 102
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K + DE++ E + + +P++LV+NK D
Sbjct: 103 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVILVINKLDT 159
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E + K + E++PVSA G +E +RD I LP P Y D +++
Sbjct: 160 FENKNEALPLIRERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYSLDQITDR 219
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT + +I I V
Sbjct: 220 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTYIDATIFV 279
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ QK I+IG G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 280 ERQGQKAIVIGDKGAKLKSIGMDARADMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 339
Query: 403 G 403
Sbjct: 340 S 340
>gi|33866147|ref|NP_897706.1| GTP-binding protein Era [Synechococcus sp. WH 8102]
gi|33639122|emb|CAE08128.1| GTP-binding protein ERA homolog [Synechococcus sp. WH 8102]
Length = 311
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 175/318 (55%), Gaps = 30/318 (9%)
Query: 105 FDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 160
+S NH+S ++G+PNVGKSTL NQ++G+K++I + QTTR+R+ I + + Q
Sbjct: 2 LSTSSSENHRSGFIALIGRPNVGKSTLVNQLVGEKVAITSPVAQTTRNRLRAILTTEDAQ 61
Query: 161 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 220
M+L DTPG I K H+L ++++ RSA D +V+L++ C+ P R D + + + +
Sbjct: 62 MVLVDTPG-IHKPHHLLGERLVQSARSAIGEVDLVVLLLEGCERPGRGDAFIVKLL--RQ 118
Query: 221 DKLPILLVLNKKDLIKP----------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDI 270
LP+L+ LNK D + GE+ K+ W + SA G G +
Sbjct: 119 QPLPVLVALNKWDKLPEDRQAEAEAAYGELLKETAW--------PIHRCSALSGEGCSAL 170
Query: 271 RDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP 330
+ +LPLGP YP ++VS+ PER +GE+IRE++ + R E+P++ V + + P
Sbjct: 171 SSAMAAQLPLGPQLYPPEMVSDQPERVLMGELIREQVLLHTREEIPHSVAVTIDRVEELP 230
Query: 331 T-----AKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVK 385
+ + ++VE+ SQK ILIGKGG LK + ARL ++ + VYLE+ VK
Sbjct: 231 AGGKGGGRTAVLATVMVERKSQKGILIGKGGAMLKTIGQGARLQMQTLIDGPVYLELFVK 290
Query: 386 VKENWRQDEGLLKHYGYG 403
V +WR L GYG
Sbjct: 291 VVPDWRSKPARLAELGYG 308
>gi|424034030|ref|ZP_17773440.1| GTP-binding protein Era [Vibrio cholerae HENC-01]
gi|408873774|gb|EKM12963.1| GTP-binding protein Era [Vibrio cholerae HENC-01]
Length = 320
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 185/319 (57%), Gaps = 16/319 (5%)
Query: 96 SPDDYEIEEFDYASH-----PNHK-----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQT 145
+ ++++I+ F +ASH P ++ +++G+PNVGKSTL N+++GQK+SI + KPQT
Sbjct: 2 ADNEFDIDAF-FASHGEVSSPENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQT 60
Query: 146 TRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP 205
TRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + + LVD
Sbjct: 61 TRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLVDGTHWT 120
Query: 206 ERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYG 264
+ + +L + K P++L +NK D ++ E+ + K D +V+P+SAK G
Sbjct: 121 KDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMMHMAEMSKKMDFVDVVPISAKQG 177
Query: 265 HGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV 324
++ +R + LP ++P++ V++ +RF EI+REK+ E+PY+ V +
Sbjct: 178 KNIDVLRKHVRDHLPEATHHFPEEYVTDRSQRFMASEIVREKLMRFTGEELPYSVTVEIE 237
Query: 325 SYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIE 383
+ P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+ +KVYLE
Sbjct: 238 RFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEELFGRKVYLETW 297
Query: 384 VKVKENWRQDEGLLKHYGY 402
VKVK W DE L+ GY
Sbjct: 298 VKVKSGWADDERALRSLGY 316
>gi|406035703|ref|ZP_11043067.1| GTPase Era [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 341
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 42 AIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 101
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K + DE++ E + + +P++LV+NK D
Sbjct: 102 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVILVINKLDT 158
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E + K + E++PVSA G ++ +RD I LP P Y D +++
Sbjct: 159 FENKNEALPLIRERAKLMNFAEIVPVSALRGANLDHLRDTIEKYLPYQPPLYSLDQITDR 218
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT A + +I I V
Sbjct: 219 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEAAVNEKTGRLKPPCTYIDATIFV 278
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ QK I+IG G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 279 ERQGQKAIVIGDKGAKLKSIGMDARTDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 338
Query: 403 G 403
Sbjct: 339 S 339
>gi|289450697|ref|YP_003475263.1| GTP-binding protein Era [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185244|gb|ADC91669.1| GTP-binding protein Era [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 563
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 170/298 (57%), Gaps = 13/298 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PN GKSTL N + GQ L+IV+ K QTTR+ I I + QMI DTPG+ E
Sbjct: 265 SIVGRPNAGKSTLLNAISGQHLAIVSRKAQTTRNNIRSIYNARGVQMIFIDTPGLHEPDT 324
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLVLNKKD 233
L M + + A N+D +++++DACKA P I+E + +LP ++ NK D
Sbjct: 325 E-LGKYMQEAAKKALSNSDILLLMIDACKAGPTSIEENCLKTA--QSLRLPTVIAFNKID 381
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
LI + L Y + E+IP+SAK GV ++ + LP GP YYP D ++
Sbjct: 382 LIDKSALLPVLNRYRQLAPQAEIIPISAKLSDGVGELLRVLTGLLPTGPRYYPVDSFTDQ 441
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYK-------TRPTAKDFIQV--EIVVEK 344
ER GE+IRE++ + EVP+ V + S++ T P + +++ I+ +K
Sbjct: 442 SERQIAGEMIREQLLIYTHEEVPHGTAVIIDSFEEVAAENSTDPYDRSLVRIHASILCDK 501
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
S K I+IGKGG++LK + +AAR +IE L KVYLE+ VKV+ +WR G+L+ GY
Sbjct: 502 ESHKGIIIGKGGQSLKRIGSAARHNIEKMLDCKVYLELHVKVRPDWRNRRGILQELGY 559
>gi|357235674|ref|ZP_09123017.1| putative GTP-binding protein era-like protein [Streptococcus
criceti HS-6]
gi|356883656|gb|EHI73856.1| putative GTP-binding protein era-like protein [Streptococcus
criceti HS-6]
Length = 298
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 178/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVETVLFMVPADEERGKGDNMIMERL--KAAKIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +K+E + D E++P+SA G+ VE + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEKIEDFRSQMDFKEIVPISALQGNNVETLLTILKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V + S + T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKILKLTEQEVPHSVAVVIESMRRDEETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|417318932|ref|ZP_12105490.1| GTPase Era [Vibrio parahaemolyticus 10329]
gi|328474122|gb|EGF44927.1| GTPase Era [Vibrio parahaemolyticus 10329]
Length = 303
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 178/311 (57%), Gaps = 14/311 (4%)
Query: 94 MASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGI 153
M+SP++ H +++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+G+
Sbjct: 1 MSSPEN---------QHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGV 51
Query: 154 CSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILE 213
+ +YQ I DTPG+ ++ ++ +M + S+ + + + LVD + + +L
Sbjct: 52 DTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLVDGTHWTKDDEMVLT 111
Query: 214 EGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRD 272
+ K P++L +NK D ++ E+ + K D +V+P+SAK G ++ +R
Sbjct: 112 KL---QKSNFPVVLCVNKVDNVQDRNEVMLHMAEMSKKMDFVDVVPISAKQGKNIDVLRK 168
Query: 273 WILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA 332
+ LP ++P++ V++ +RF EI+REK+ +E+PY+ V + + P
Sbjct: 169 HVRNHLPKATHHFPEEYVTDRSQRFMASEIVREKLMRFTGDELPYSVTVEIERFDYNPET 228
Query: 333 KDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWR 391
F I I+VE+N QK ++IGKGG+ +K + ARLD+E+ +KVYLE VKVK W
Sbjct: 229 DGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEELFGRKVYLETWVKVKSGWA 288
Query: 392 QDEGLLKHYGY 402
DE L+ GY
Sbjct: 289 DDERALRSLGY 299
>gi|424042892|ref|ZP_17780557.1| GTP-binding protein Era [Vibrio cholerae HENC-02]
gi|408884700|gb|EKM23433.1| GTP-binding protein Era [Vibrio cholerae HENC-02]
Length = 320
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 185/319 (57%), Gaps = 16/319 (5%)
Query: 96 SPDDYEIEEFDYASH-----PNHK-----SVLGKPNVGKSTLANQMIGQKLSIVTNKPQT 145
+ ++++I+ F +ASH P ++ +++G+PNVGKSTL N+++GQK+SI + KPQT
Sbjct: 2 ADNEFDIDAF-FASHGEVSSPENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQT 60
Query: 146 TRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP 205
TRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + + LVD
Sbjct: 61 TRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLVDGTHWT 120
Query: 206 ERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYG 264
+ + +L + K P++L +NK D ++ E+ + K D +V+P+SAK G
Sbjct: 121 KDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMMHMADMSKKMDFVDVVPISAKQG 177
Query: 265 HGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV 324
++ +R + LP ++P++ V++ +RF EI+REK+ E+PY+ V +
Sbjct: 178 KNIDVLRKHVRDHLPEATHHFPEEYVTDRSQRFMASEIVREKLMRFTGEELPYSVTVEIE 237
Query: 325 SYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIE 383
+ P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+ +KVYLE
Sbjct: 238 RFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEELFGRKVYLETW 297
Query: 384 VKVKENWRQDEGLLKHYGY 402
VKVK W DE L+ GY
Sbjct: 298 VKVKSGWADDERALRSLGY 316
>gi|336314845|ref|ZP_08569760.1| GTP-binding protein Era [Rheinheimera sp. A13L]
gi|335880904|gb|EGM78788.1| GTP-binding protein Era [Rheinheimera sp. A13L]
Length = 298
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 177/291 (60%), Gaps = 7/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ++GQK+SI + KPQTTRHRI+GI + YQ + DTPG+ ++
Sbjct: 11 AIVGRPNVGKSTLLNQLVGQKVSITSRKPQTTRHRIVGIDTQDNYQTVYVDTPGLHIEEK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M K S ++ + I+ +V+ + + +L + K P+LLV+NK DL
Sbjct: 71 RAINRLMNKAAASTILDVELIIFVVEGTRWTDDDQMVLNRLIAAKK---PVLLVVNKVDL 127
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
K E + L+W + ++IP+SA+ G V+ +R+ + +LP ++P++ V++
Sbjct: 128 YKDKEDLLPHLQWLGSQLEFQQIIPLSAEKGTNVQTLRELVQKQLPPCEFFFPEEYVTDR 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILI 352
RF EI+REK+ +E+PYA V + +K K + I ++VE+++QK ++I
Sbjct: 188 SSRFMASEIVREKLMRFLGDELPYAVTVEIERFKWE--EKHYHIAALVLVERDTQKQMVI 245
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
GK G+ +K +AT AR D+E ++ V+L++ VKVK W DE L+ GYG
Sbjct: 246 GKKGERIKTIATEARKDMETLFEQPVFLQVWVKVKSGWADDERALRSLGYG 296
>gi|374295818|ref|YP_005046009.1| GTP-binding protein Era [Clostridium clariflavum DSM 19732]
gi|359825312|gb|AEV68085.1| GTP-binding protein Era [Clostridium clariflavum DSM 19732]
Length = 297
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 173/296 (58%), Gaps = 17/296 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N + G+K++I++ KPQTTR+ I + +G YQ++ DTPGI + K
Sbjct: 9 SIVGRPNVGKSTLLNSITGEKIAIMSEKPQTTRNTIKAVVTGDNYQLVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILL 227
+ D M+ V S D ++ LV+A ++ G GD K + L
Sbjct: 69 KLGDYMVNIAVESLS-EVDAVLFLVEA--------NTVKPGPGDLYIIDQLKNVKSNVFL 119
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK DL+ ++ ++ Y+ D + +IP+SA + + +L +P GP Y+P
Sbjct: 120 VINKIDLVDKAQLLPLIDAYKDLMDFEAIIPISALTDGKQDLLISEVLKVMPEGPKYFPD 179
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 346
D++++ PE+ E+IREKI +EVP+ V V+S+K R IQ I EK++
Sbjct: 180 DMLTDQPEKLIAAELIREKILQLVSDEVPHGVGVEVISFKQREDKNIINIQANIYCEKDT 239
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ILIGKGGK LK + + +R++IE+ L KV+LE+ VKVK +WR +E +LK GY
Sbjct: 240 HKGILIGKGGKMLKKIGSLSRIEIENLLGTKVFLELWVKVKPDWRNNEQMLKVLGY 295
>gi|390935142|ref|YP_006392647.1| GTP-binding protein Era-like-protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570643|gb|AFK87048.1| GTP-binding protein Era-like-protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 299
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 184/297 (61%), Gaps = 20/297 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+ NVGKSTL N ++ +K++I ++KPQTTR+ I GI +G +YQ+I DTPGI + K
Sbjct: 9 ALIGRTNVGKSTLLNALLNEKVAITSDKPQTTRNTIQGILTGEDYQVIFIDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK--DKL-----PILL 227
H L M+++V+ D ++ +V+ P+ +E G GD D L P++L
Sbjct: 68 HKLSEFMIESVKKTLAEVDLVIYMVE----PD-----VEVGPGDKYIIDHLINIDTPVIL 118
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D + + ++ +++ + +V+P+SA ++ ++ I++ +P GP Y+P
Sbjct: 119 VINKIDAVSHETVDMSIQMFKQLYNFKDVLPISALKNMNIDLLKHTIVSYMPEGPQYFPS 178
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 345
D +++ PE+F V EIIREKI +EVP+ V V S KTR KD + +E I EK
Sbjct: 179 DYITDRPEKFLVSEIIREKILNYLEDEVPHGVYVEVDSMKTRED-KDILDIEAFIYCEKE 237
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
S K I+IGK G+ L+ + ++AR+++E +K+YL++ VKV++ WR + +L+++GY
Sbjct: 238 SHKAIIIGKNGQMLRRIGSSARIELESLFGQKIYLDLWVKVRKGWRDNVSILRNFGY 294
>gi|407718404|ref|YP_006795809.1| GTP-binding protein [Leuconostoc carnosum JB16]
gi|407242160|gb|AFT81810.1| GTP-binding protein [Leuconostoc carnosum JB16]
Length = 303
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 172/289 (59%), Gaps = 3/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+ K
Sbjct: 12 AIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K+ SA AD I + DA R D+ + + + D K+ PI L++NK DL
Sbjct: 71 NSLGDFMVKSAFSALHEADAIWFIADASMPRGRGDDFIIDRLKDVKNT-PIYLLINKVDL 129
Query: 235 IKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P ++ + Y E D EV P+SA+ G V ++ I+ L GP Y+ D +++H
Sbjct: 130 VSPQDLLTIIASYQEDAIDWTEVFPISAREGDNVPELLGNIVDSLDEGPQYFDADQLTDH 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK I+IG
Sbjct: 190 PERFVIGELIREKVLQLTRQEVPHSVAVVIDKIARENEEKIHIQASIIVERPTQKNIIIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G +K + T AR DIE + KV+LE VKV+ WR L+ GY
Sbjct: 250 KQGTMIKEIGTRARKDIESLMGDKVFLETWVKVEPRWRDRPQALQTLGY 298
>gi|260775207|ref|ZP_05884105.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450]
gi|260608908|gb|EEX35070.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450]
Length = 324
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 189/342 (55%), Gaps = 33/342 (9%)
Query: 70 DDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLAN 129
D D EFD + F S E ++SP++ H +++G+PNVGKSTL N
Sbjct: 3 DSTDNNEFDIDAFFSSSGE-----VSSPEN---------QHCGFVAIVGRPNVGKSTLLN 48
Query: 130 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 189
+++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+
Sbjct: 49 RILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSL 108
Query: 190 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD--------LIKPGEIA 241
+ + + LVD + + +L + K P++L +NK D ++ +++
Sbjct: 109 SDVNLVFFLVDGTHWTKDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNDVMLHMMDMS 165
Query: 242 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 301
KK+E+ +V+P+SAK G ++ +R + LP ++P++ V++ +RF E
Sbjct: 166 KKMEFV-------DVVPISAKQGKNIDVLRKHVREHLPKAAHHFPEEYVTDRSQRFMASE 218
Query: 302 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALK 360
I+REK+ E+PY+ V + + P F I I+VE+N QK ++IGKGG+ +K
Sbjct: 219 IVREKLMRFTGEELPYSVTVEIERFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIK 278
Query: 361 LLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ ARLD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 279 TIGREARLDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 320
>gi|435854566|ref|YP_007315885.1| GTP-binding protein Era [Halobacteroides halobius DSM 5150]
gi|433670977|gb|AGB41792.1| GTP-binding protein Era [Halobacteroides halobius DSM 5150]
Length = 303
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 176/293 (60%), Gaps = 8/293 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL NQ+IGQK++I + K QTTR++I I + + QMI DTPG+ + +
Sbjct: 16 TVIGQPNVGKSTLINQLIGQKIAITSRKAQTTRNKIQCILTLDQAQMIFLDTPGVHQSQD 75
Query: 175 HMLDSMMMKNVRSAGI-NADCIVVLVDACKAPERIDE-ILEEGVGDHKDKLPILLVLNKK 232
M + V + + + + ++ +VDA P D+ I ++ G P+LLVLNK
Sbjct: 76 KM--GQYLNEVATQALKDINLVLFMVDANYPPNYDDKRIAQQLTGIDT---PVLLVLNKV 130
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D I ++A ++ YEK + E + +SA ++ + D I+ +P GP YYP D+V++
Sbjct: 131 DTIDKKKLASRINDYEKLGNFIETVTISALEEVNLDHLVDQIVEFMPQGPKYYPDDMVTD 190
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIIL 351
E+F + E+IRE++ EVP++ V ++ + R + I+ I VE+ SQK IL
Sbjct: 191 QIEQFIIAELIREQVLNYTHQEVPHSVAVEIIDFNERQEQELIDIRANIYVERKSQKGIL 250
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
IGK G LK + +AAR DIE L KV+L++ VKVK++WR+ E LK GY G
Sbjct: 251 IGKNGSMLKKIGSAAREDIESLLNTKVFLDLWVKVKKDWREKEDALKMLGYRG 303
>gi|299471247|emb|CBN79102.1| PEra, plastid Era GTPase [Ectocarpus siliculosus]
Length = 382
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 173/311 (55%), Gaps = 29/311 (9%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PNVGKSTL N MIG +LSIVT K TTRHRI GI +G ++QMI DTPG++
Sbjct: 76 TIVGSPNVGKSTLMNNMIGDRLSIVTPKAGTTRHRITGIMTGDDFQMIYQDTPGVLTPA- 134
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ML MM V+ A +AD I+ + D + +I E + K PI++ +NK DL
Sbjct: 135 YMLHEGMMNFVQEAMGDADAILFVTDLFETEFANTQIFERMLAAGK---PIVVAVNKVDL 191
Query: 235 I-----------KPGEIAKKLE------------WYEKFTDVDEVIPVSAKYGHGVEDIR 271
+ +PG +A + W E+ V+P+SA G D+
Sbjct: 192 LPSDGKSGDGPERPGLLAASTQKEVGSLKDVLGKWEERLPGA-TVLPISALEGINTVDLA 250
Query: 272 DWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT 331
+ +P GP + D++S+ P+RFF EIIRE+IF + E+PY+C+V + +K R
Sbjct: 251 GELKKHIPEGPPLFGTDVMSDKPQRFFAAEIIREQIFGSFSQEIPYSCEVLLGKFKER-M 309
Query: 332 AKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWR 391
+ I IVV + SQK ++IGK G +K + AR+ +E+ L +V L + VKV +NWR
Sbjct: 310 VETVIDATIVVSQESQKGMVIGKKGAKIKEVGIKARVALEEHLGTRVNLRLNVKVDKNWR 369
Query: 392 QDEGLLKHYGY 402
+ + LK YGY
Sbjct: 370 RKKTSLKEYGY 380
>gi|119493602|ref|ZP_01624266.1| GTP-binding protein Era [Lyngbya sp. PCC 8106]
gi|119452592|gb|EAW33775.1| GTP-binding protein Era [Lyngbya sp. PCC 8106]
Length = 312
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 173/290 (59%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++G+PNVGKSTL NQM+GQK++I + QTTR+R+ GI + PE Q+I DTPG I K
Sbjct: 24 GIIGRPNVGKSTLMNQMVGQKIAITSPVAQTTRNRLRGILTTPEAQIIFVDTPG-IHKPH 82
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L +++KN + A + D ++ +VD D + + + + K+P++L LNK D
Sbjct: 83 HQLGQVLVKNAQIAIRSVDVLLFVVDGSVMAGGGDRFIADLL--NSTKVPVILGLNKLDQ 140
Query: 235 IKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
+P E + E Y++ + ++ SA G GV+ ++ I+ +L GP YYP D+V++
Sbjct: 141 -QPQEPQRINESYQQLIESHSWPILQFSALTGTGVDSLQHLIIEQLEPGPYYYPPDLVTD 199
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERF +GE+IRE+I + R EVP++ +++ + P + I E+ SQK ILI
Sbjct: 200 QPERFIMGELIREQILLHTREEVPHSVAISIDRVEEDPKITRIL-ATIHAERPSQKGILI 258
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG+ LK + + AR I+ + +VYLE+ VKV+ WRQ L GY
Sbjct: 259 GKGGQMLKTIGSDARQQIQKLVAGQVYLELFVKVQPKWRQSRSRLADLGY 308
>gi|125973582|ref|YP_001037492.1| GTP-binding protein Era [Clostridium thermocellum ATCC 27405]
gi|256003401|ref|ZP_05428392.1| GTP-binding protein Era [Clostridium thermocellum DSM 2360]
gi|281417787|ref|ZP_06248807.1| GTP-binding protein Era [Clostridium thermocellum JW20]
gi|385778496|ref|YP_005687661.1| GTP-binding protein Era [Clostridium thermocellum DSM 1313]
gi|419723677|ref|ZP_14250792.1| GTP-binding protein Era-like-protein [Clostridium thermocellum AD2]
gi|419724498|ref|ZP_14251560.1| GTP-binding protein Era-like-protein [Clostridium thermocellum YS]
gi|125713807|gb|ABN52299.1| GTP-binding protein Era [Clostridium thermocellum ATCC 27405]
gi|255992691|gb|EEU02782.1| GTP-binding protein Era [Clostridium thermocellum DSM 2360]
gi|281409189|gb|EFB39447.1| GTP-binding protein Era [Clostridium thermocellum JW20]
gi|316940176|gb|ADU74210.1| GTP-binding protein Era [Clostridium thermocellum DSM 1313]
gi|380772045|gb|EIC05903.1| GTP-binding protein Era-like-protein [Clostridium thermocellum YS]
gi|380780359|gb|EIC10042.1| GTP-binding protein Era-like-protein [Clostridium thermocellum AD2]
Length = 297
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 178/292 (60%), Gaps = 9/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+ G+K++I+++KPQTTR+ I I +G +YQ+I DTPGI + K
Sbjct: 9 SIVGRPNVGKSTLLNKFTGEKIAIMSDKPQTTRNTIRAIDTGEDYQIIYIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDA-CKAPERIDEILEEGVGDHKDKLPILLVLNKK 232
+ D M+ N+ +N D ++ LV+A C P D + E + + K P+ ++NK
Sbjct: 69 KLGDFMV--NIALDSLNEVDLVLFLVEATCPQPGPGDLYIIEQLKNLKT--PVFCLINKI 124
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DL++ +I + Y+ + ++IP+SA VE +++ I LP GP Y+P D++++
Sbjct: 125 DLVEKEQILPIIAAYKDTMEFSQIIPISALEYESVEVVKNEIKKVLPEGPKYFPDDMITD 184
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEIVVEKNSQKII 350
PE+ E+IREKI +EVP+ V VV++K R KD IQ I EK S K I
Sbjct: 185 QPEKVIAAELIREKILHLLSDEVPHGVGVEVVTFKKR-DDKDILDIQATIYCEKESHKGI 243
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LIGK GK LK + + +R +IE KV+LE+ VKVK +WR +E +LK GY
Sbjct: 244 LIGKEGKMLKKIGSLSRAEIEGLFGTKVFLELWVKVKPDWRNNEFMLKTLGY 295
>gi|254230525|ref|ZP_04923896.1| GTP-binding protein Era [Vibrio sp. Ex25]
gi|262393271|ref|YP_003285125.1| GTP-binding protein Era [Vibrio sp. Ex25]
gi|151936950|gb|EDN55837.1| GTP-binding protein Era [Vibrio sp. Ex25]
gi|262336865|gb|ACY50660.1| GTP-binding protein Era [Vibrio sp. Ex25]
Length = 320
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 183/329 (55%), Gaps = 19/329 (5%)
Query: 76 EFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQK 135
EFD + F S E +SP++ H +++G+PNVGKSTL N+++GQK
Sbjct: 5 EFDIDAFFASQGEP-----SSPEN---------QHCGFIAIVGRPNVGKSTLLNKILGQK 50
Query: 136 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 195
+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + +
Sbjct: 51 ISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLV 110
Query: 196 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVD 254
LVD + + +L + K P++L +NK D ++ E+ + K D
Sbjct: 111 FFLVDGTHWTKDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMLHMAEMSKKMDFV 167
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 314
+V+P+SAK G ++ +R + LP ++P++ V++ +RF EI+REK+ E
Sbjct: 168 DVVPISAKQGKNIDVLRKHVRNHLPKATHHFPEEYVTDRSQRFMASEIVREKLMRFTGEE 227
Query: 315 VPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDF 373
+PY+ V + + P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+
Sbjct: 228 LPYSVTVEIERFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEEL 287
Query: 374 LQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+KVYLE VKVK W DE L+ GY
Sbjct: 288 FGRKVYLETWVKVKSGWADDERALRSLGY 316
>gi|347525599|ref|YP_004832347.1| GTP-binding protein Era [Lactobacillus ruminis ATCC 27782]
gi|345284558|gb|AEN78411.1| GTP-binding protein Era [Lactobacillus ruminis ATCC 27782]
Length = 300
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 176/293 (60%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKST N++IGQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFIAILGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTDDAQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D ++ +V+A + R D+ + E + + K PI L +
Sbjct: 66 -HKPQSRLGDFMVESALSTLNEVDAVIFMVNAEQKRGRGDDFIIERLKNVKK--PIYLAI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P + + ++ Y D +V P+SA G+ ++ D ++ LP GP YYP D
Sbjct: 123 NKIDRIHPDHLLEVMDDYRGALDFKDVFPISALQGNNCQEFIDTLIKDLPEGPQYYPTDQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++HPERF GE+IREK+ R EVP++ V V K R K IQ I+VE+ SQK
Sbjct: 183 VTDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIKRRDEGKILIQATIIVERASQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + AR DIE + KVYLE+ VKV NW+ + L+ GY
Sbjct: 243 IIIGKGGKMLKTIGVKARKDIELMMGDKVYLELWVKVMPNWKDRQIDLRSLGY 295
>gi|218132942|ref|ZP_03461746.1| hypothetical protein BACPEC_00803 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991815|gb|EEC57819.1| ribosome biogenesis GTPase Era [[Bacteroides] pectinophilus ATCC
43243]
Length = 322
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 170/289 (58%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N++IGQK++I +NKPQTTR+RI + + Q++ DTPGI + K
Sbjct: 30 AIIGRPNVGKSTLMNRIIGQKIAITSNKPQTTRNRIQTVYTDDRGQIVFLDTPGIHKAK- 88
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+ D ++ LV+ DE + E + K K P++LV+NK D
Sbjct: 89 NKLGEYMVGAAEKTIDEVDLVLWLVEPSSFIGAGDEHILEKL--SKVKSPVVLVINKIDT 146
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
IK E+ + Y+ D E++P+SA G G +D+ D I +P GP +Y +D V++ P
Sbjct: 147 IKKEEVLPVIAEYKNKMDFAEIVPISAYDGTGTDDLVDVIFKYMPYGPMFYDEDTVTDQP 206
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFIQVEIVVEKNSQKIILIG 353
R V EI+REK EVP+ V + S K R K I I+ E+ S K I+IG
Sbjct: 207 MRQIVAEIVREKALHALDEEVPHGIAVVIDSMKKRKGKKITDIDATIICERESHKGIIIG 266
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + T AR +IE L++KV L++ VKVK+ WR + LLK++GY
Sbjct: 267 KGGSMLKKIGTNARFEIEKLLEQKVNLKLFVKVKKEWRDSDFLLKNFGY 315
>gi|163816524|ref|ZP_02207888.1| hypothetical protein COPEUT_02714 [Coprococcus eutactus ATCC 27759]
gi|158448224|gb|EDP25219.1| ribosome biogenesis GTPase Era [Coprococcus eutactus ATCC 27759]
Length = 299
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 175/292 (59%), Gaps = 10/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N++IGQK++I +NK QTTR+RI + + + Q+I DTPGI K
Sbjct: 11 SIIGRPNVGKSTLMNRLIGQKIAITSNKAQTTRNRIQTVYTSDKGQIIFLDTPGINRAK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILEEGVGDHKDKLPILLVLNK 231
+ L M+K S D ++ +V+A A ER I+E+ K PI++V+NK
Sbjct: 70 NKLGEYMLKVAESTLDEVDVVLWIVEATTFIGAGERY--IIEQL---QHVKTPIIVVVNK 124
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D ++ G++ + + Y+ D E++PVSA G +++ D I+ LP GP YY +D V+
Sbjct: 125 IDNVEEGKVFEAINTYKDACDFAEIVPVSALKGKNTDELIDTIMKYLPYGPQYYDEDTVT 184
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKII 350
+ PER V E+IRE+ Q EVP+ V + S K RP I I+ E++S K I
Sbjct: 185 DQPERQIVAELIREQALRQLDKEVPHGIAVVIDSMKERPNGGIIDIDATIICERDSHKGI 244
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+IGK G LK + T AR IE L KV L++ VKVK++WR + LL+++G+
Sbjct: 245 IIGKQGAMLKKIGTHARYGIERLLDTKVNLKLWVKVKKDWRDTDTLLRNFGF 296
>gi|317472456|ref|ZP_07931779.1| GTP-binding protein Era [Anaerostipes sp. 3_2_56FAA]
gi|316900074|gb|EFV22065.1| GTP-binding protein Era [Anaerostipes sp. 3_2_56FAA]
Length = 301
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 170/289 (58%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I + KPQTTR+RI + + Q++ DTPGI K
Sbjct: 11 TLIGRPNVGKSTLMNQLIGQKIAITSKKPQTTRNRIQTVFTDERGQIVFLDTPGINRAKN 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+ R+ D I+ LV+ + + E +G K K P++LV+NK D
Sbjct: 71 KLGDYMLKVAERTLN-EVDLILWLVEPTTFIGGGERYIIEQLG--KVKTPVILVINKTDT 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K EI K + Y+ + E+IPVSA G +D+ D I LP GP ++ +D V++ P
Sbjct: 128 VKDEEILKAITTYKDVCEFAEIIPVSALKGQNTDDVTDSIFKYLPEGPMFFDEDTVTDQP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
ER E+IREK E+P+ V + S K R I IV E++S K I+IG
Sbjct: 188 ERQICAELIREKALRLLDQEIPHGIAVVIDSMKERRHGHIIDIDATIVCERDSHKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + + AR+++E+ L KV L++ VKVK++WR + LLK+YGY
Sbjct: 248 KQGSMLKKIGSQARMEMENLLDIKVNLQLWVKVKKDWRDSDMLLKNYGY 296
>gi|428207766|ref|YP_007092119.1| GTP-binding protein Era [Chroococcidiopsis thermalis PCC 7203]
gi|428009687|gb|AFY88250.1| GTP-binding protein Era [Chroococcidiopsis thermalis PCC 7203]
Length = 318
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 48/349 (13%)
Query: 67 MDLDDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKS----VLGKPNV 122
M D D +F DA L++ + P P +KS ++G+PNV
Sbjct: 1 MITSDNDSFDFSDA---LTIPQAP--------------------PGYKSGFIGIIGRPNV 37
Query: 123 GKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMM 182
GKSTL NQ++GQK++I + QTTR+R+ GI + P Q I DTPG I K H L +++
Sbjct: 38 GKSTLMNQLVGQKIAITSPVAQTTRNRLRGILTTPAAQFIFVDTPG-IHKPHHQLGEVLV 96
Query: 183 KNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPG---- 238
KN + A + D ++ +VD + D + E + + + P++L LNK D
Sbjct: 97 KNAQIAIDSVDVVLFVVDGSQVAGGGDRFIIELL--TQTQTPVVLGLNKIDRRSTNTEDL 154
Query: 239 -----EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
EIAK +W +++ SA G G+E ++ I+ L GP YYP D+V++
Sbjct: 155 DRSYQEIAKSYQW--------QMLKFSALNGEGLEALQQAIVECLEPGPYYYPPDLVTDQ 206
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF +GE+IRE+I + R+EVP++ + + + P I +E++SQK ILIG
Sbjct: 207 PERFIMGELIREQILLLTRDEVPHSVAITIDKVEEAPNITRVF-ATIHIERDSQKGILIG 265
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG LK + +AAR I+ + KVYLE+ VKV+ WRQ L +GY
Sbjct: 266 KGGAMLKAIGSAAREQIQKLIAGKVYLELFVKVQPKWRQSRLRLSEFGY 314
>gi|262373077|ref|ZP_06066356.1| GTP-binding protein Era [Acinetobacter junii SH205]
gi|262313102|gb|EEY94187.1| GTP-binding protein Era [Acinetobacter junii SH205]
Length = 341
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 169/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 42 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGMHKKEV 101
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ +VDA K + DE++ E + + ++P++LV+NK D
Sbjct: 102 RAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--EMPVILVINKLDT 158
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E + K D E++PVSA G +E +RD I LP Y D +++
Sbjct: 159 FENKNEALPLIRERAKLMDFAEIVPVSALRGANLEHLRDTIEKYLPYQAPLYSLDQITDR 218
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT + +I I V
Sbjct: 219 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTYIDATIFV 278
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E+ QK I+IG G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 279 ERQGQKAIVIGDKGAKLKSIGMDARTDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 338
Query: 403 G 403
Sbjct: 339 S 339
>gi|237756325|ref|ZP_04584877.1| GTP-binding protein Era [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691511|gb|EEP60567.1| GTP-binding protein Era [Sulfurihydrogenibium yellowstonense SS-5]
Length = 307
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 178/291 (61%), Gaps = 4/291 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IG KLSIV+ +PQTTR RILG+ P+ Q+I DTPG+ +K
Sbjct: 16 AIVGRPNVGKSTLLNNIIGTKLSIVSPRPQTTRMRILGVKHLPDAQIIFLDTPGV-QKGG 74
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+L +M++V S +AD I++++DA + D+ + E +K P +L +NK D
Sbjct: 75 DLLTKSVMESVVSGIESADVILMVIDAEAGWTKEDKEIVENYLKKVNK-PAILAINKIDK 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
IK + +E K D E +P+SA ++++ + I LP P YP+D +++ P
Sbjct: 134 IKRDLVLPLIEESTKIYDFKEFVPISAIKNLNIDELIETIKKYLPESPPLYPEDQITDLP 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
+F++ EIIREK+F+ R EVPY+ V V S K K+ + ++ I VEK + K I+I
Sbjct: 194 LKFYIAEIIREKVFLNTRQEVPYSVAVEVESIKEGEKNKNLLIIDAVIYVEKENHKGIII 253
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
GK G+ LK + AR ++E L KKV+L + VKVKE W++D LL+ GY
Sbjct: 254 GKQGQMLKKIGMQAREELEFLLGKKVHLNLYVKVKERWKEDLPLLRELGYN 304
>gi|256851187|ref|ZP_05556576.1| GTP-binding protein Era [Lactobacillus jensenii 27-2-CHN]
gi|260660611|ref|ZP_05861526.1| GTP-binding protein Era [Lactobacillus jensenii 115-3-CHN]
gi|297206052|ref|ZP_06923447.1| GTP-binding protein Era [Lactobacillus jensenii JV-V16]
gi|256616249|gb|EEU21437.1| GTP-binding protein Era [Lactobacillus jensenii 27-2-CHN]
gi|260548333|gb|EEX24308.1| GTP-binding protein Era [Lactobacillus jensenii 115-3-CHN]
gi|297149178|gb|EFH29476.1| GTP-binding protein Era [Lactobacillus jensenii JV-V16]
Length = 302
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 170/290 (58%), Gaps = 8/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK+ I +NK QTTR++I GI + Q + DTPGI K
Sbjct: 13 ALIGRPNVGKSTLMNHLIGQKVVITSNKSQTTRNKISGIFTTENLQAVFVDTPGI-HKPQ 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD--HKDKLPILLVLNKK 232
+ LD M K S+ + D + +V+ PE++ + +E + D K K+PI L++NK
Sbjct: 72 NKLDDYMDKASLSSLNDVDLVFFMVE----PEKVGK-GDEYIADLLSKVKVPIFLIINKI 126
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
D + P + +E Y+K E++P+SA G+ +ED+ + LP GP +Y D V++
Sbjct: 127 DQVHPDSLLPVIESYQKLGKFAEIVPISATNGNNMEDLVATLYKYLPEGPQFYGSDEVTD 186
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PE F V E+IRE+I + E+P+A V V R K ++ I VE++ QK I+I
Sbjct: 187 RPEYFVVAELIREQILRLTQQEIPHATAVVVERMNQRINGKLQVEATIYVERDGQKKIII 246
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG LK + +R +E L +K+ L + VKV++NWR D LK GY
Sbjct: 247 GKGGSMLKKIGIQSRKQVEALLGEKINLHLWVKVQKNWRTDPSFLKQIGY 296
>gi|104774144|ref|YP_619124.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514234|ref|YP_813140.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385815887|ref|YP_005852278.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|122275034|sp|Q04A20.1|ERA_LACDB RecName: Full=GTPase Era
gi|122983938|sp|Q1G9W6.1|ERA_LACDA RecName: Full=GTPase Era
gi|103423225|emb|CAI98053.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|116093549|gb|ABJ58702.1| GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125924|gb|ADY85254.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 301
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 176/296 (59%), Gaps = 12/296 (4%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q++ DTPG
Sbjct: 7 HKSGFVALVGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKISGIYTEDDMQVVFVDTPG 66
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGV-GDHKD-KLPIL 226
I K LD M K S+ + D ++ +VDA +A + EE V G KD +P+
Sbjct: 67 IF-KSHSDLDEYMDKASLSSLKDVDLVMFMVDAKEAGKG-----EEYVAGLLKDLDIPVF 120
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
LV+NK D + P E+ ++ Y+ E +P+SA+ G+GV+D+ + LP GP YY
Sbjct: 121 LVINKIDQVHPNELLPIIDSYQAVGKFAEFLPISARQGNGVDDLLKTLKDYLPEGPQYYA 180
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D +++ PE F V E+IRE+I EVP++ V V R K I I VEK+
Sbjct: 181 SDEITDRPEYFVVAEMIREQILRLTDQEVPHSTAVWVDQMNQRINGKLQIDATIFVEKDG 240
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IG+ G +K + +R +IE+ L +KV L++ VKV+ +WRQD LK GY
Sbjct: 241 QKRIIIGQRGSMIKQIGMRSRKEIENLLGEKVNLKLWVKVRRDWRQDPAFLKSIGY 296
>gi|399516944|ref|ZP_10758520.1| GTP-binding protein Era [Leuconostoc pseudomesenteroides 4882]
gi|398648198|emb|CCJ66547.1| GTP-binding protein Era [Leuconostoc pseudomesenteroides 4882]
Length = 303
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 172/289 (59%), Gaps = 3/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+ K
Sbjct: 12 AIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K+ SA AD I + DA R D+ + + + + K+ PI L++NK DL
Sbjct: 71 NSLGDFMVKSAFSALHEADAIWFVADASMPRGRGDDFIIDRLKEVKNT-PIYLLINKIDL 129
Query: 235 IKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P ++ + Y E + EV P+SA G V ++ D I+ L GP Y+ D +++H
Sbjct: 130 LAPNDLLNVIASYQENAPEWTEVFPISATEGDNVPELLDNIVANLDEGPQYFDSDQLTDH 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK I+IG
Sbjct: 190 PERFVIGELIREKVLQLTRQEVPHSVAVVIDKIAREDEEKIHIQASIIVERPTQKHIIIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G +K + T AR DIE + KVYLE VKV+ WR L+ GY
Sbjct: 250 KQGAMIKQIGTRARKDIERLMGDKVYLETWVKVEPRWRDRPQALQTLGY 298
>gi|423076637|ref|ZP_17065345.1| ribosome biogenesis GTPase Era [Desulfitobacterium hafniense DP7]
gi|361852442|gb|EHL04702.1| ribosome biogenesis GTPase Era [Desulfitobacterium hafniense DP7]
Length = 287
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 175/287 (60%), Gaps = 4/287 (1%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q++ DTPGI + K H
Sbjct: 1 MVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQVVFLDTPGIHKPK-H 59
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLI 235
L M+ + + D I+ +VD +E + E + K P +L+LNK DLI
Sbjct: 60 KLGEFMVDSALESLREVDLILYMVDTTAEFGAGEEYILENLKHVKT--PCILLLNKIDLI 117
Query: 236 KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPE 295
+ ++ K ++ Y D ++P+SAK G +++ I ++P GP YYP+D V++ PE
Sbjct: 118 EKDKLLKLIKDYSALKDFLAILPISAKTGENKDELMKLIFKEMPQGPMYYPEDEVTDQPE 177
Query: 296 RFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKG 355
RF + E++REK+ R+EVP++ V V S + + T ++ IVVE++SQK I+IG G
Sbjct: 178 RFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKKTLIK-VRALIVVERDSQKGIIIGHG 236
Query: 356 GKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR DIE L KV+LE+ VKV+++WR L+ +GY
Sbjct: 237 GSLLKEIGRLARQDIETLLGSKVFLELFVKVEKDWRNRGRSLREFGY 283
>gi|312864794|ref|ZP_07725025.1| ribosome biogenesis GTPase Era [Streptococcus downei F0415]
gi|311099921|gb|EFQ58134.1| ribosome biogenesis GTPase Era [Streptococcus downei F0415]
Length = 321
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 31 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHKPKT 90
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D ++ E + K+P++LV+NK D
Sbjct: 91 ALGD-FMVESAYSTLREVETVLFMVPADEERGKGDNMIMERL--KAAKIPVILVINKIDQ 147
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +K++ + D E++P+SA G+ +E + + L G Y+P+D +++HP
Sbjct: 148 VHPDQLLEKIDDFRSQMDFKEIVPISALQGNNIETLMMILKDNLEEGYQYFPEDQITDHP 207
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + + EVP++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 208 ERFLVSEMIREKVLLLTQQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQKGIIIG 267
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L KV+LE VKVK+NWR + L +GY
Sbjct: 268 KKGSMLKKIGQLARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGY 316
>gi|269960404|ref|ZP_06174777.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|424047712|ref|ZP_17785270.1| GTP-binding protein Era [Vibrio cholerae HENC-03]
gi|269834831|gb|EEZ88917.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|408883676|gb|EKM22455.1| GTP-binding protein Era [Vibrio cholerae HENC-03]
Length = 320
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 184/329 (55%), Gaps = 19/329 (5%)
Query: 76 EFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQK 135
EFD + F S E ++SP++ H +++G+PNVGKSTL N+++GQK
Sbjct: 5 EFDIDAFFASNGE-----VSSPEN---------QHCGFIAIVGRPNVGKSTLLNKILGQK 50
Query: 136 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 195
+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + +
Sbjct: 51 ISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLV 110
Query: 196 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVD 254
LVD + + +L + K P++L +NK D ++ E+ + K D
Sbjct: 111 FFLVDGTHWTKDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMMHMADMSKKMDFV 167
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 314
+V+P+SAK G ++ +R + LP ++P++ V++ +RF EI+REK+ E
Sbjct: 168 DVVPISAKQGKNIDVLRKHVRDHLPEATHHFPEEYVTDRSQRFMASEIVREKLMRFTGEE 227
Query: 315 VPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDF 373
+PY+ V + + P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+
Sbjct: 228 LPYSVTVEIERFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEEL 287
Query: 374 LQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+KVYLE VKVK W DE L+ GY
Sbjct: 288 FGRKVYLETWVKVKSGWADDERALRSLGY 316
>gi|342215118|ref|ZP_08707783.1| GTP-binding protein Era [Veillonella sp. oral taxon 780 str. F0422]
gi|341589767|gb|EGS33030.1| GTP-binding protein Era [Veillonella sp. oral taxon 780 str. F0422]
Length = 299
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKSTL N +I K+ IV++K QTTR+RI+ + + + Q++ DTPGI + K
Sbjct: 13 AVVGRPNVGKSTLINALIDDKIVIVSDKAQTTRNRIVCVYTDEKKQIVFMDTPGIHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V A + D + E + K +P+ L++NK D
Sbjct: 72 HKLGEFMVDQAVDSLREVEAVLFVVAANEKRGPGDNFVIEQL--RKVNVPVFLIVNKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + + YE + V+P+SAK +E++ + + LP GP Y+P D++++ P
Sbjct: 130 MDKQDLLEAIVSYENSYPFEAVVPISAKEKDNIEEVVNLLEKHLPEGPKYFPDDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI +Q +E+P+A V+V KTR +++ I VE++SQK I+IGK
Sbjct: 190 ERLIISDIVREKILLQTHDEIPHAIAVDVDEMKTREDGTTYVRATIYVERDSQKGIIIGK 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR D+E L KV+L++ VKVK++WR G+L GY
Sbjct: 250 QGAMLKTIGRQARGDVERLLATKVFLDLWVKVKKDWRNKSGMLSELGY 297
>gi|42519246|ref|NP_965176.1| GTP-binding protein Era [Lactobacillus johnsonii NCC 533]
gi|385825800|ref|YP_005862142.1| GTP-binding protein era protein [Lactobacillus johnsonii DPC 6026]
gi|417837448|ref|ZP_12483686.1| GTP-binding protein Era [Lactobacillus johnsonii pf01]
gi|41583534|gb|AAS09142.1| GTP-binding protein era-like protein [Lactobacillus johnsonii NCC
533]
gi|329667244|gb|AEB93192.1| GTP-binding protein era protein [Lactobacillus johnsonii DPC 6026]
gi|338760991|gb|EGP12260.1| GTP-binding protein Era [Lactobacillus johnsonii pf01]
Length = 303
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 175/294 (59%), Gaps = 10/294 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++ DTPGI + K
Sbjct: 14 ALIGRPNVGKSTLLNYLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIVFIDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
+ LD M K+ SA D ++ +V+ A K + I E+L+ K K P+ LV+NK
Sbjct: 73 NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------KIKKPVFLVINK 126
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + P E+ ++ Y+ D E++P+SA G+ V ++ I LP GP +Y D ++
Sbjct: 127 IDKVHPDELLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLPEGPQFYDADQLT 186
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ PE F V E+IRE++ EVP+A V V + K ++ I VE+ QK I+
Sbjct: 187 DRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQVEATIYVERPGQKGII 246
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
IGK G+ LK + AAR +IE L +KV L + VKV++NWR D LK GY +
Sbjct: 247 IGKKGQMLKQIGIAARQEIEALLGEKVNLRLWVKVQKNWRSDPAFLKSIGYNAK 300
>gi|320529427|ref|ZP_08030515.1| GTP-binding protein Era [Selenomonas artemidis F0399]
gi|320138393|gb|EFW30287.1| GTP-binding protein Era [Selenomonas artemidis F0399]
Length = 298
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 170/297 (57%), Gaps = 17/297 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PN GKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTPG+ + K
Sbjct: 10 AVIGRPNAGKSTLINALIGQKIAIMSDKPQTTRSRILCILTQEDAQVIFLDTPGVHKPK- 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L S M K A + V+V A E++ G G+ K ++P+LL
Sbjct: 69 HKLGSHMAKATEGA---LHGVDVVVFVVDATEKM------GAGEQYILKQLEKVRVPVLL 119
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK DL++ E + Y K D ++P+SA+ + + D I LP GP YYP+
Sbjct: 120 AVNKIDLLRREETLPIIASYAKTYDFAGIVPISARAEENLAGLLDEIKKHLPEGPRYYPE 179
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D+V++ PER + E++REK R+E+P+A V++ TR +++ I VE+ SQ
Sbjct: 180 DMVTDQPERLIIAELVREKALELTRDEIPHAVAVDIEEITTRAKGDVYVRAVIYVERESQ 239
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
K I+IG G L+ + AR DIE L KVYL++ VK + +WR E L+ +G G
Sbjct: 240 KGIVIGARGALLRTIGARARADIETLLGAKVYLDLWVKTRRDWRNRESALREFGLSG 296
>gi|389576532|ref|ZP_10166560.1| GTP-binding protein Era [Eubacterium cellulosolvens 6]
gi|389312017|gb|EIM56950.1| GTP-binding protein Era [Eubacterium cellulosolvens 6]
Length = 304
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 179/293 (61%), Gaps = 12/293 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I + KPQTTR+RI I + Q++ DTPGI + K
Sbjct: 12 ALIGRPNVGKSTLMNHLIGQKIAITSRKPQTTRNRIQTIYNSDRGQIVFLDTPGIHKAK- 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVD----ACKAPERIDEILEEGVGDHKDKLPILLVLN 230
+ L M+ S+ N D ++ L++ A + I ++L+ K LP++LV+N
Sbjct: 71 NKLGEYMVYAAESSLKNVDAVMWLIEPGAYVGAAEQHIVQMLD------KAGLPVILVIN 124
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D +K +A+ ++ Y KFT ++++ VSAK ++ + D + + LP GP ++ +D V
Sbjct: 125 KIDKVKKDVVAETIQTYGKFTRFEDIVAVSAKQSTNLDGLIDSLFSVLPYGPRFFDEDTV 184
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFIQVEIVVEKNSQKI 349
++ P R E+IREK E+P+ V + K RP K I+ I+ E++S K
Sbjct: 185 TDQPVRQVAAEMIREKTLRSLGEEIPHGIAVVIDKMKERPDGKITDIEATIICERDSHKG 244
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G+ LK + + AR+DIE L+ KV L+I VKV+++WR+ + L+K+YGY
Sbjct: 245 IVIGKQGRMLKKIGSEARVDIEQMLETKVNLKIWVKVRKDWRESDILVKNYGY 297
>gi|334120212|ref|ZP_08494294.1| GTP-binding protein Era-like-protein [Microcoleus vaginatus FGP-2]
gi|333457000|gb|EGK85627.1| GTP-binding protein Era-like-protein [Microcoleus vaginatus FGP-2]
Length = 315
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 177/298 (59%), Gaps = 24/298 (8%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DTPG I K
Sbjct: 28 GIVGRPNVGKSTLMNQLVGQKIAITSPVSQTTRNRLRGILTTPEAQIIFVDTPG-IHKPH 86
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L ++++N R+A + D ++ +VD +E G GD K+P++L
Sbjct: 87 HQLGKVLVQNARTAIQSVDVVLFVVDGS---------VESGGGDRYIVEILSNCKVPVIL 137
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
+NK D +P + YE+ + + V+ SA G GVE ++ ++ L +GP YYP
Sbjct: 138 GMNKLDE-QPEDSVLIDRTYEQIVNPEWPVVKFSALTGEGVEPLQQLLIEHLEVGPYYYP 196
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPY--ACQVNVVSYKTRPTAKDFIQVEIVVEK 344
D+V++ PERF +GE+IRE+I + R EVP+ A +++V + + T I I VE+
Sbjct: 197 PDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDIVQEEAKITR---ILATIHVER 253
Query: 345 NSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+SQK ILIGK G LK + +AAR I+ ++ KVYLE+ VKV+ WRQ L GY
Sbjct: 254 DSQKGILIGKSGSMLKSIGSAAREQIQKLIEGKVYLELFVKVQPKWRQSRTRLAELGY 311
>gi|294139710|ref|YP_003555688.1| GTP-binding protein Era [Shewanella violacea DSS12]
gi|293326179|dbj|BAJ00910.1| GTP-binding protein Era [Shewanella violacea DSS12]
Length = 335
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 169/290 (58%), Gaps = 2/290 (0%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+GI + E Q++ DTPG+ ++
Sbjct: 45 AIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTVAERQVVFIDTPGLHMEEK 104
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ +V +VD E D +L + + D +L +NK D
Sbjct: 105 RAINRLMNRAAASSLAEVSLVVFVVDGMTWTEDDDLVLRK-LQSRDDGRKTVLAVNKVDN 163
Query: 235 IKPG-EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
IK E+ LE K DE++P+SA G V+ I D + LP P ++P+D V++
Sbjct: 164 IKNKEELFPYLEALSKKFPFDEILPISATKGTNVQRILDMSIESLPESPHFFPEDYVTDR 223
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
++F EI+REK+ +E+PY C V + +K I ++VE+ +QK ++IG
Sbjct: 224 SQKFMASEIVREKLMRFLGDELPYDCTVEIEQFKMMENGVYQINALVLVERETQKRMVIG 283
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G +K +++AAR+D+E KV+LE+ VKVK W DE L+ GYG
Sbjct: 284 NKGDRIKKISSAARVDMEVMFDNKVFLEMWVKVKSGWADDERALRSLGYG 333
>gi|399924387|ref|ZP_10781745.1| GTPase Era [Peptoniphilus rhinitidis 1-13]
Length = 301
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 181/303 (59%), Gaps = 6/303 (1%)
Query: 102 IEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 161
+EE ++ S + SV+G+PNVGKSTL N +IG+K+S +++KPQTTR I I + + QM
Sbjct: 1 MEENNFKS--GYISVVGRPNVGKSTLLNSIIGEKISAISSKPQTTRQNITFIHTDDDSQM 58
Query: 162 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 221
I DTPGI K + L M+ + AD I +VD K + + + + + ++
Sbjct: 59 IFLDTPGIQRPK-NKLGEFMLNESKEGIEEADIITYIVDVSKRIGKAERSIIDILKEYNG 117
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
++PI+L++NK D IK E+ + + Y DE+IP+SA G++ + + L G
Sbjct: 118 QIPIILLINKVDKIKKEELLEIISMYSNEGIFDELIPISAIKNDGIDIYLETLKKYLKPG 177
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE-- 339
P YY +D++++ ERF V EIIREK EVP+ +++ +K R K+F +E
Sbjct: 178 PMYYSEDMITDKNERFIVSEIIREKGLRYLNEEVPHGLAISIERFKKRKD-KNFYDIEAI 236
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE+ + K I+IG+GG LK + T +R DIE+ L KV L+I +KV++NWR+ + L+K
Sbjct: 237 IYVEREAHKKIIIGRGGSMLKRIGTESREDIENLLDAKVNLQIWIKVQKNWREKDNLVKR 296
Query: 400 YGY 402
+GY
Sbjct: 297 FGY 299
>gi|378825354|ref|YP_005188086.1| GTP-binding protein era [Sinorhizobium fredii HH103]
gi|365178406|emb|CCE95261.1| GTP-binding protein era homolog [Sinorhizobium fredii HH103]
Length = 309
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 171/294 (58%), Gaps = 3/294 (1%)
Query: 108 ASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
A+H +++G N GKSTL N ++G K+SIV++K QTTR I GI Q++ DTP
Sbjct: 14 ATHSGFVALIGATNAGKSTLVNHLVGAKVSIVSHKVQTTRAIIRGIAIHDNAQIVFMDTP 73
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
GI + + LD M+ + +AD IV+L+D+ + + E + E + D P LL
Sbjct: 74 GIFKPR-RRLDRAMVTSAWGGAKDADLIVLLIDSERGLKGDAEAILEALKDVPQ--PKLL 130
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
VLNK D ++P ++ K + + + +SA G G +D+ D++ T LP GP YYP+
Sbjct: 131 VLNKIDRVRPEDLLKLAQAANEAVPFERTFMISALTGSGCKDLMDYLATALPEGPWYYPE 190
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D +S+ P R EI REK+F++ E+PYA V ++ R I+ I VE++SQ
Sbjct: 191 DQISDLPMRQLAAEITREKLFLRLHQELPYASHVETEKWEERKDGSVRIEQVIYVERDSQ 250
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
K I +GKGG+A+K ++TAAR +I + L++ V+L + VKV+ENW D + G
Sbjct: 251 KKIALGKGGEAIKAISTAARKEISEILEQPVHLFLFVKVRENWGNDPERFREMG 304
>gi|308274308|emb|CBX30907.1| GTP-binding protein era homolog [uncultured Desulfobacterium sp.]
Length = 303
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 176/290 (60%), Gaps = 6/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++ G PN GKSTL N+++G K+SI + KPQTTR++ILG+ P Q++ DTPGI K
Sbjct: 18 AIAGAPNAGKSTLLNKLLGFKISITSKKPQTTRNKILGVVHRPLSQLVFIDTPGIF-KAN 76
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L+ ++ S + D I+++ DA + + IL + + P++L LNK D+
Sbjct: 77 NALNIKIVDAALSTFGDVDIILIVGDAANPDSKSESILIKNMESINK--PVVLALNKIDI 134
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ ++ + + +EK D V+PVSAK GVED+ + LP GPA++P+D++++ P
Sbjct: 135 VDKSKLLEIIIQWEKRFDFKAVVPVSAKSAEGVEDLLCVLENILPPGPAFFPEDMLTDVP 194
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIILI 352
ERF E+IREKIF E+PYA V + S+ T K + +E I +E++SQK I+I
Sbjct: 195 ERFVAAEMIREKIFRLTGQEIPYASAVTIDSF-TDKKNKGLVAIEATIHIERDSQKGIII 253
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GK G LK + AR +IE + KKV+L++ VKV ++W +++ LK + Y
Sbjct: 254 GKNGSKLKQIGIEARQEIEQLIGKKVFLQLFVKVDKDWSKNDRTLKQFLY 303
>gi|110597803|ref|ZP_01386086.1| Small GTP-binding protein domain:GTP-binding protein Era
[Chlorobium ferrooxidans DSM 13031]
gi|110340528|gb|EAT59011.1| Small GTP-binding protein domain:GTP-binding protein Era
[Chlorobium ferrooxidans DSM 13031]
Length = 305
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 170/294 (57%), Gaps = 8/294 (2%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G PN GKSTL N+++ KLSIVT KPQTTR +I GI + Q+I DTPGI++ +
Sbjct: 13 IIGPPNAGKSTLLNELLDYKLSIVTPKPQTTRKKITGIYHNDKCQIIFLDTPGIMKPQQK 72
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP---ILLVLNKK 232
+ +SM+ +R +AD ++ L+ E D E + K I+ VLNK
Sbjct: 73 LHESML-GIIRETLKDADIVIALLPYSGKKEFFDREFAEELFSSWLKPAGKKIIAVLNKS 131
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DL+ + + K + V+ VSA G + + D I LPL YP+D +S
Sbjct: 132 DLVTEERQREAEAFVRKTWNPAAVLSVSALKGSNLPALIDTIQPYLPLNYPLYPEDTLST 191
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIVVEKNSQK 348
PERFFV EIIREKIF+ Y EVPY+ +V + ++ + P KD I+ ++VE+ +QK
Sbjct: 192 APERFFVSEIIREKIFLLYGREVPYSTEVVIDEFREQHEDDPKRKDLIRCSVIVERETQK 251
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIG G ALK L AR DIE+ L + V+LE+ +KV+ +WR+++ LK YGY
Sbjct: 252 QILIGSKGAALKKLGQTARKDIEELLGRPVFLELFIKVRPDWRKNQNYLKSYGY 305
>gi|325290526|ref|YP_004266707.1| GTP-binding protein Era-like-protein [Syntrophobotulus glycolicus
DSM 8271]
gi|324965927|gb|ADY56706.1| GTP-binding protein Era-like-protein [Syntrophobotulus glycolicus
DSM 8271]
Length = 305
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 167/288 (57%), Gaps = 4/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PN GKSTL N ++GQK+ I++ KPQTTR+RI I + Q++ DTPGI + K
Sbjct: 17 AVVGRPNAGKSTLLNTLVGQKVLIISEKPQTTRNRIQCILTEERGQIVFIDTPGIHKPK- 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + D I+ +VDA DE + V + +P +L LNK DL
Sbjct: 76 HQLGQYMVNTAKGSLRGTDLIIYVVDASVPFGTGDEYVLNMVKE--SGIPSILALNKIDL 133
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ EI K+ + + D EV+P+SA G + + D I L GP YYP+D + + P
Sbjct: 134 LSKEEILSKIIEFSQQADFKEVVPISALQGENTKKLTDLIFPNLLPGPMYYPEDHIIDQP 193
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ERF V E+IREK+ R EVP++ V +V A I I+VE+ SQK I+IGK
Sbjct: 194 ERFVVAELIREKLLKLTREEVPHSAAV-IVEKMEEQKALLKISAVILVERESQKGIVIGK 252
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G LK + AR +IE L KV+LE+ VKV+++WR + +L+ +GY
Sbjct: 253 NGAMLKEVGRQAREEIEALLDNKVFLELWVKVRKDWRNQQNILREFGY 300
>gi|365839497|ref|ZP_09380735.1| ribosome biogenesis GTPase Era [Anaeroglobus geminatus F0357]
gi|364564587|gb|EHM42345.1| ribosome biogenesis GTPase Era [Anaeroglobus geminatus F0357]
Length = 298
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 170/295 (57%), Gaps = 17/295 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
SV+G+PNVGKSTL N+++GQK++IV++K QTTR++IL I + + Q++ DTPGI + K
Sbjct: 11 SVVGRPNVGKSTLINRILGQKVTIVSDKAQTTRNKILCIHTDADSQIVFLDTPGIHKPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD----HKDK---LPILL 227
H L M + + + D ++ LV A DE + G GD HK K P+ L
Sbjct: 70 HKLGRFMDEAAYGSLKDIDAVLFLVAA-------DE--KRGPGDMFILHKIKDIHAPVFL 120
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D + ++ K + Y D +IPVSA G V + + LP GP Y+P
Sbjct: 121 VINKIDKLDKEKLLKIMADYSSLCDFAAIIPVSALKGENVSAVMGELKKILPPGPKYFPD 180
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D++++ PER V EI+REK+ R EVP+A V R K +I+V + VE++SQ
Sbjct: 181 DMITDRPERLLVAEIVREKLLQLTREEVPHALAVYTEEMAKRENNKVYIRVTVYVERDSQ 240
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGK G LK + AR +IE L V+L+I VKVK +WR +L +GY
Sbjct: 241 KRIVIGKNGSVLKEIGRLARTEIERLLGSSVFLDIWVKVKTDWRNKASVLSEFGY 295
>gi|323340794|ref|ZP_08081046.1| GTP-binding protein Era [Lactobacillus ruminis ATCC 25644]
gi|417974210|ref|ZP_12615032.1| GTPase Era [Lactobacillus ruminis ATCC 25644]
gi|323091917|gb|EFZ34537.1| GTP-binding protein Era [Lactobacillus ruminis ATCC 25644]
gi|346329435|gb|EGX97732.1| GTPase Era [Lactobacillus ruminis ATCC 25644]
Length = 300
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 176/293 (60%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKST N++IGQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFIAILGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTDDAQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D ++ +V+A + R D+ + E + + K PI L +
Sbjct: 66 -HKPQSRLGDFMVESALSTLNEVDAVIFMVNAEQKRGRGDDFIIERLKNVKK--PIYLAI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P + + ++ Y D +V P+SA G+ ++ D ++ LP GP YYP D
Sbjct: 123 NKIDRIHPDHLLEVMDDYRGALDFKDVFPISALQGNNCQEFIDTLIKDLPEGPQYYPTDQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++HPERF GE+IREK+ R EVP++ V V K R K IQ I+VE+ SQK
Sbjct: 183 VTDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIKRRDEEKILIQATIIVERASQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + AR DIE + KVYLE+ VKV NW+ + L+ GY
Sbjct: 243 IIIGKGGKMLKTIGVKARKDIELMMGDKVYLELWVKVMPNWKDRQIDLRSLGY 295
>gi|303231481|ref|ZP_07318211.1| GTP-binding protein Era [Veillonella atypica ACS-049-V-Sch6]
gi|302513824|gb|EFL55836.1| GTP-binding protein Era [Veillonella atypica ACS-049-V-Sch6]
Length = 299
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKST+ N +IG K++IV++K QTTR+RI+ + + E Q++ DTPG+ + K
Sbjct: 13 AVVGRPNVGKSTMINALIGDKIAIVSDKAQTTRNRIICVYTDEEKQIVFMDTPGVHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 72 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVVNKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++ + + Y+ VIP+SAK + ++ + + LP GP Y+P+D++++ P
Sbjct: 130 LQKEQVLEAIVSYQDAYPFAGVIPISAKNKENLSELLNVLGEHLPEGPQYFPEDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +IIREKI + R+E+P+A V+V KTR +I+ I E++SQK I+IG
Sbjct: 190 ERLIISDIIREKILLSTRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGN 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G L+ + AR+DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 250 KGALLRKIGAEARMDIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGY 297
>gi|354567532|ref|ZP_08986701.1| GTP-binding protein Era-like-protein [Fischerella sp. JSC-11]
gi|353542804|gb|EHC12265.1| GTP-binding protein Era-like-protein [Fischerella sp. JSC-11]
Length = 318
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 179/305 (58%), Gaps = 25/305 (8%)
Query: 111 PNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 166
P+ KS ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + E Q+I DT
Sbjct: 22 PDFKSGFIGIVGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGILTTKEAQLIFVDT 81
Query: 167 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPER-IDEILEEGVGDHKDK 222
PG I K H L ++++N + A + D ++ +VDA C A +R I ++L
Sbjct: 82 PG-IHKPHHQLGEVLVQNAKIAIESVDVVLFVVDATTFCGAGDRYIADLLSH------SS 134
Query: 223 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD-----EVIPVSAKYGHGVEDIRDWILTK 277
PI+L LNK D + A L E +T + + + SAK G G+ +++ ++
Sbjct: 135 TPIILGLNKID----QQTANSLAIDESYTQLANAHQWQTVKFSAKTGTGLSELQQLLIQN 190
Query: 278 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 337
+ GP YYP D+V++ PERF +GE+IRE+I + R E+P++ +++ + T +
Sbjct: 191 IEPGPYYYPPDLVTDQPERFIMGELIREQILLLTREEIPHSVAISIDKLEETTTITRVL- 249
Query: 338 VEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLL 397
I VE++SQK ILIGKGG LK + +AAR I+ + KVYLE+ VKV+ WRQ L
Sbjct: 250 ATIHVERDSQKGILIGKGGSMLKAVGSAAREQIQKLIAGKVYLELFVKVQPKWRQSRIRL 309
Query: 398 KHYGY 402
+GY
Sbjct: 310 AEFGY 314
>gi|335996721|ref|ZP_08562638.1| GTP-binding protein Era [Lactobacillus ruminis SPM0211]
gi|335351791|gb|EGM53282.1| GTP-binding protein Era [Lactobacillus ruminis SPM0211]
Length = 300
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 176/293 (60%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKST N++IGQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFIAILGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTDDAQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D ++ +V+A + R D+ + E + + K PI L +
Sbjct: 66 -HKPQSRLGDFMVESALSTLNEVDAVIFMVNAEQKRGRGDDFIIERLKNVKK--PIYLAI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P + + ++ Y D +V P+SA G+ ++ D ++ LP GP YYP D
Sbjct: 123 NKIDRIHPDHLLEVMDDYRGALDFKDVFPISALQGNNCQEFIDTLIEDLPEGPQYYPTDQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++HPERF GE+IREK+ R EVP++ V V K R K IQ I+VE+ SQK
Sbjct: 183 VTDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIKRRDEEKILIQATIIVERASQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + AR DIE + KVYLE+ VKV NW+ + L+ GY
Sbjct: 243 IIIGKGGKMLKTIGVKARKDIELMMGDKVYLELWVKVMPNWKDRQIDLRSLGY 295
>gi|113955090|ref|YP_729987.1| GTP-binding protein Era [Synechococcus sp. CC9311]
gi|113882441|gb|ABI47399.1| GTP-binding protein Era [Synechococcus sp. CC9311]
Length = 317
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 174/298 (58%), Gaps = 12/298 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IG K++I + QTTR+R+ I + E Q+IL DTPG I K
Sbjct: 23 ALIGRPNVGKSTLVNQLIGDKIAITSPVAQTTRNRLRAILTTDEAQLILVDTPG-IHKPH 81
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H+L +++ RSA D +++L++ C+AP R D + + + + LP+ ++LNK DL
Sbjct: 82 HLLGERLVRTARSAIGEVDQVLLLLEGCEAPGRGDAFIVQLL--RQQSLPVQVLLNKWDL 139
Query: 235 IKPGEI--AKKLEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
+ P E A + E ++ D V SA G G ++ I + +P GP YP D+VS
Sbjct: 140 V-PLEQKDAADAAYRELLSETDWPVHRCSALSGDGCPELVKAISSLMPEGPQLYPSDMVS 198
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNV-----VSYKTRPTAKDFIQVEIVVEKNS 346
+ PER +GE+IRE++ + R EVP++ V++ + K + + + ++VE+ S
Sbjct: 199 DQPERLLMGELIREQVLLNTREEVPHSVAVSIDRIEEIPAKGKGNGRTAVLATVLVERKS 258
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGG 404
QK ILIGKGG LK + ARL ++ + VYLE+ VKV +WR L GY G
Sbjct: 259 QKGILIGKGGAMLKTIGQGARLQMQTLIDGPVYLELFVKVVPDWRSKPARLAELGYVG 316
>gi|451972097|ref|ZP_21925309.1| GTP-binding protein Era [Vibrio alginolyticus E0666]
gi|451931935|gb|EMD79617.1| GTP-binding protein Era [Vibrio alginolyticus E0666]
Length = 320
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 183/329 (55%), Gaps = 19/329 (5%)
Query: 76 EFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQK 135
EFD + F S E +SP++ H +++G+PNVGKSTL N+++GQK
Sbjct: 5 EFDIDAFFASQGEP-----SSPEN---------QHCGFIAIVGRPNVGKSTLLNKILGQK 50
Query: 136 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 195
+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + +
Sbjct: 51 ISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLV 110
Query: 196 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVD 254
LVD + + +L + K P++L +NK D ++ E+ + K D
Sbjct: 111 FFLVDGTHWTKDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMLHMAEMSKKMDFV 167
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 314
+V+P+SAK G ++ +R + LP ++P++ V++ +RF EI+REK+ E
Sbjct: 168 DVVPISAKQGKNIDVLRKHVRKHLPKATHHFPEEYVTDRSQRFMASEIVREKLMRFTGEE 227
Query: 315 VPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDF 373
+PY+ V + + P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+
Sbjct: 228 LPYSVTVEIERFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEEL 287
Query: 374 LQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+KVYLE VKVK W DE L+ GY
Sbjct: 288 FGRKVYLETWVKVKSGWADDERALRSLGY 316
>gi|167747959|ref|ZP_02420086.1| hypothetical protein ANACAC_02691 [Anaerostipes caccae DSM 14662]
gi|167652609|gb|EDR96738.1| ribosome biogenesis GTPase Era [Anaerostipes caccae DSM 14662]
Length = 301
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 170/289 (58%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL NQ+IGQK++I + KPQTTR+RI + + Q++ DTPGI K
Sbjct: 11 TLIGRPNVGKSTLMNQLIGQKIAITSKKPQTTRNRIQTVFTDDRGQIVFLDTPGINRAKN 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+ R+ D I+ LV+ + + E +G K K P++LV+NK D
Sbjct: 71 KLGDYMLKVAERTLN-EVDLILWLVEPTTFIGGGERYIIEQLG--KVKTPVILVINKTDT 127
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+K EI K + Y+ + E+IPVSA G +D+ D I LP GP ++ +D V++ P
Sbjct: 128 VKDEEILKAITTYKDVCEFAEIIPVSALKGQNTDDVTDSIFKYLPEGPMFFDEDTVTDQP 187
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIG 353
ER E+IREK E+P+ V + S K R I IV E++S K I+IG
Sbjct: 188 ERQICAELIREKALRLLDQEIPHGIAVVIDSMKERRHGHIIDIDAMIVCERDSHKGIIIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + + AR+++E+ L KV L++ VKVK++WR + LLK+YGY
Sbjct: 248 KQGSMLKKIGSQARMEMENLLDIKVNLQLWVKVKKDWRDSDMLLKNYGY 296
>gi|428225533|ref|YP_007109630.1| GTP-binding protein Era [Geitlerinema sp. PCC 7407]
gi|427985434|gb|AFY66578.1| GTP-binding protein Era [Geitlerinema sp. PCC 7407]
Length = 319
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 168/290 (57%), Gaps = 5/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++G+PNVGKSTL NQM+GQK++I + QTTR+R+ GI + P+ QMI DTPG I K
Sbjct: 29 GLVGRPNVGKSTLMNQMVGQKIAITSPVAQTTRNRLRGILTTPQAQMIFVDTPG-IHKPH 87
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L ++++N + A + D ++ +VD A D +EE + + +++ LNK D
Sbjct: 88 HRLGEVLVQNAQIAIQSVDVLLFVVDGSVAAGSGDRYIEELIAQKGQGVTVIVGLNKIDQ 147
Query: 235 IKPGEIAKKLEWYEKFTDVD--EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
+P E Y ++ SA G G++ +++ ++ L GP YYP D+V++
Sbjct: 148 -QPSESEAIDHSYYSLAQAHGWPIVKFSALTGQGLDKLQELLINHLEPGPYYYPPDLVTD 206
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
PERF +GE+IRE+I + R EVP++ + + T A + I VE+ SQK I+I
Sbjct: 207 QPERFIMGELIREQILLHTREEVPHSVAI-AIDMVTEEDALTRVLATIHVERPSQKGIVI 265
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GKGG LK + +AAR I+ ++ KVYLE+ VKV+ WRQ L GY
Sbjct: 266 GKGGAMLKTIGSAARQQIQKLIEGKVYLELFVKVQPKWRQSRLRLSELGY 315
>gi|253580801|ref|ZP_04858064.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847871|gb|EES75838.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 302
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 174/294 (59%), Gaps = 13/294 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I + KPQTTR+RI + + E Q++ DTPGI + K
Sbjct: 11 AIIGRPNVGKSTLMNHLIGQKIAITSKKPQTTRNRIQTVYTCDEGQIVFLDTPGIHKAK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK---APER-IDEILEEGVGDHKDKLPILLVLN 230
+ L M++ D I+ LV+ A ER I E L+ G+G +P++L++N
Sbjct: 70 NKLGEYMVQVAERTLKEVDAIMWLVEPSTFIGAGERHIAEQLQ-GIG-----VPVILIIN 123
Query: 231 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
K D + EI ++ Y K D E+IP SA G +DI IL LP GP +Y +D V
Sbjct: 124 KIDTVSKEEILPAIDTYRKVCDFAEIIPCSALRGQNTQDIIGCILKYLPYGPMFYDEDTV 183
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQK 348
++ P+R V EIIREK E+P+ V + KTRP + ++ I+ E+ S K
Sbjct: 184 TDQPQRQIVAEIIREKALHALDAEIPHGIAVAIDRMKTRPGKNPIVDIDATIICERESHK 243
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + + AR +IE L+ KV L++ VKVK++WR + L+K++GY
Sbjct: 244 GIIIGKQGAMLKKIGSNARYEIERMLESKVNLKLWVKVKKDWRDSDFLIKNFGY 297
>gi|238853405|ref|ZP_04643784.1| GTP-binding protein Era [Lactobacillus gasseri 202-4]
gi|238833977|gb|EEQ26235.1| GTP-binding protein Era [Lactobacillus gasseri 202-4]
Length = 303
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 180/306 (58%), Gaps = 12/306 (3%)
Query: 103 EEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 162
E+ DY S +++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++
Sbjct: 4 EKKDYKS--GFVALIGRPNVGKSTLLNFLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIV 61
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDH 219
DTPGI + K + LD M K+ SA D ++ +V+ A K + I E+L+
Sbjct: 62 FIDTPGIHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------ 114
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 279
K K P+ LV+NK D + P ++ ++ Y+ D E++P+SA G+ V ++ I LP
Sbjct: 115 KIKKPVFLVINKIDKVHPDKLLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKNLP 174
Query: 280 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 339
GP +Y D +++ PE F V E+IRE++ EVP+A V V + K I+
Sbjct: 175 EGPQFYDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQIEAT 234
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE+ QK I+IGK G+ LK + AAR +IE L +KV L + VKV++NWR D LK
Sbjct: 235 IYVERPGQKGIIIGKKGQMLKQIGIAARQEIEALLGEKVNLRLWVKVQKNWRSDPAFLKS 294
Query: 400 YGYGGQ 405
GY +
Sbjct: 295 IGYNAK 300
>gi|350532417|ref|ZP_08911358.1| GTPase Era [Vibrio rotiferianus DAT722]
Length = 320
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 171/295 (57%), Gaps = 5/295 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+G+ + +YQ I DTPG+
Sbjct: 25 HCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGL 84
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
++ ++ +M + S+ + + + LVD + + +L + K P++L +
Sbjct: 85 HIEEKRAINRLMNRAANSSLSDVNLVFFLVDGTHWTKDDEMVLTKL---QKSNFPVVLCV 141
Query: 230 NKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D ++ E+ + K D +V+P+SAK G ++ +R + LP ++P++
Sbjct: 142 NKVDNVQDRNEVMMHMADMSKKMDFVDVVPISAKQGKNIDVLRKHVRDHLPEATHHFPEE 201
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 347
V++ +RF EI+REK+ E+PY+ V + + P F I I+VE+N Q
Sbjct: 202 YVTDRSQRFMASEIVREKLMRFTGEELPYSVTVEIERFDYNPETDGFHINALILVERNGQ 261
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K ++IGKGG+ +K + ARLD+E+ +KVYLE VKVK W DE L+ GY
Sbjct: 262 KKMVIGKGGEKIKTIGREARLDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 316
>gi|326791151|ref|YP_004308972.1| GTP-binding protein Era [Clostridium lentocellum DSM 5427]
gi|326541915|gb|ADZ83774.1| GTP-binding protein Era [Clostridium lentocellum DSM 5427]
Length = 302
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 172/291 (59%), Gaps = 8/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N++IG+K++I++NKPQTTR+RI + + YQ + DTPGI K
Sbjct: 11 SIIGRPNVGKSTLMNKLIGEKVAIMSNKPQTTRNRIQTVLTTKHYQAVFIDTPGIHTPK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-EILEEGVGDHKDKLPILLVLNKKD 233
+ L M+K+ + D I LV+A + D EI+E G P+ L +NK D
Sbjct: 70 NKLGEFMVKSAMTTLNEVDAIFYLVEAEPFIGKTDQEIIERLKGIQT---PVFLCINKID 126
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ + K +E Y + D E+IP+SA V+ I + LP GP ++P D++++
Sbjct: 127 SVPRETVLKTIETYREAYDFKEIIPISAYENTNVDAILKCMPAYLPEGPQFFPSDMLTDQ 186
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKIIL 351
PER V E+IREK E+P+ + + + + R D + +E IV E++S K I+
Sbjct: 187 PERQIVAEMIREKALHLLDKEIPHGIAIEIETMRKREEG-DIVDIEATIVCERDSHKRII 245
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G+ +K + + AR D+E L K+YL + VKVK+NWR + L+K+YGY
Sbjct: 246 IGKQGQMIKAIGSKARYDMERLLGSKIYLTLWVKVKKNWRDSDFLIKNYGY 296
>gi|307243689|ref|ZP_07525829.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678]
gi|306492898|gb|EFM64911.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678]
Length = 300
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 174/290 (60%), Gaps = 7/290 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N M+G+K++I+++KPQTTR+ I + + + Q++ DTPGI + K
Sbjct: 9 SIVGRPNVGKSTLMNNMVGEKIAIMSDKPQTTRNTIQAVYTDDQAQIVFLDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L MM+K+ + N DCI+ +VD + D ++ E + K K+P+ LV+NK D
Sbjct: 68 NKLGQMMVKSAEESFKNVDCILFVVDDSDKIGKGDSMIIENL--RKAKVPVFLVINKVDK 125
Query: 235 I-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
I EI ++ Y++ E+IPVSA G V+ + I L LGP Y+P +V++
Sbjct: 126 IANKEEIFDLIKMYDQEGLFKEIIPVSALKGSNVDSLIKAIKQTLDLGPKYFPDYMVTDQ 185
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV--EKNSQKIIL 351
PER V E+IREK+ +EVP+ + + K R KD + V V+ E+NS K I+
Sbjct: 186 PERVLVAELIREKVLQYTNDEVPHGIAIEIEKMKARKD-KDIVDVSAVIYCERNSHKGII 244
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
IGK G+ LK + +AR +IE L +V L++ VKVKENWR + +G
Sbjct: 245 IGKNGRKLKGIGKSAREEIEFLLDTRVNLQLWVKVKENWRNMTNFITDFG 294
>gi|227534995|ref|ZP_03965044.1| GTP-binding protein era family protein [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227187386|gb|EEI67453.1| GTP-binding protein era family protein [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 278
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 174/281 (61%), Gaps = 17/281 (6%)
Query: 129 NQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSA 188
N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI + K + LD+ M K S
Sbjct: 2 NRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK-NELDTYMDKAALST 60
Query: 189 GINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKLPILLVLNKKDLIKPGEIA 241
D I+ +V+A DE E+G GD + K P+ L++NK DL+KP ++
Sbjct: 61 LNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEVKKPVYLIINKIDLVKPDDLL 111
Query: 242 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 301
+E Y+ +V P+SA G+ V+++ + LP+GP YYP+D +++HPE F VGE
Sbjct: 112 PLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVGPQYYPEDQLTDHPEYFVVGE 171
Query: 302 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKL 361
+IREKI R+EVP+A V V K R K I+ I+VE++SQK I+IG+GG+ LK
Sbjct: 172 LIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIVERDSQKGIIIGRGGQMLKQ 231
Query: 362 LATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 232 IGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 272
>gi|357238130|ref|ZP_09125467.1| GTP-binding protein Era [Streptococcus ictaluri 707-05]
gi|356752853|gb|EHI69974.1| GTP-binding protein Era [Streptococcus ictaluri 707-05]
Length = 299
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVETVIFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
I P ++ ++++ + D E++P+SA G+ V + + + L G Y+P+D +++HP
Sbjct: 126 IHPDQLLEQIDDFRSQMDFKEIVPISATQGNNVNRLMEILKANLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + EVP++ V V S K T K I+ ++VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTKQEVPHSVAVVVESMKRDDETDKVHIRATVMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGQMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGY 294
>gi|385799572|ref|YP_005835976.1| GTP-binding protein Era [Halanaerobium praevalens DSM 2228]
gi|309388936|gb|ADO76816.1| GTP-binding protein Era [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 173/295 (58%), Gaps = 8/295 (2%)
Query: 112 NHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
N+KS V+G+PNVGKSTL N +IG+K++I++ +PQTTR+ I I + E Q+I DTP
Sbjct: 2 NYKSGFVTVIGRPNVGKSTLVNTLIGEKINIISPRPQTTRNSIKAIYTEAEGQIIFIDTP 61
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
GI E + + LD M ++ D I+ ++D + DE++ + + K I+
Sbjct: 62 GIHEAR-NELDKYMQGEAYNSLDGIDIIIFILDGSTYWGKNDEMIYKQLKSSKQ--DIIY 118
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D + ++ K+ + Y + EVIP+SA + + I +LP GP YYP
Sbjct: 119 VMNKIDKMSNKDLIKRQKEYSQKVG-QEVIPISALNNKNTDTLLTEIFNRLPEGPQYYPD 177
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D++++ ERF E+IREKIF R EVPY V V K R +I+ I VEK S
Sbjct: 178 DMITDQIERFVFAEMIREKIFYLTREEVPYGVAVLVEEVKERDNDDYYIRANIYVEKKSH 237
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K I+IGK G+ LK + + AR +IE +Q KVYL++ VKV ++WR+ + LLK GY
Sbjct: 238 KGIIIGKNGRMLKKIGSQARKEIEGLMQTKVYLDLWVKVLKDWREKDNLLKRMGY 292
>gi|313891295|ref|ZP_07824913.1| ribosome biogenesis GTPase Era [Streptococcus pseudoporcinus SPIN
20026]
gi|416851945|ref|ZP_11909090.1| GTP-binding protein Era [Streptococcus pseudoporcinus LQ 940-04]
gi|313120362|gb|EFR43483.1| ribosome biogenesis GTPase Era [Streptococcus pseudoporcinus SPIN
20026]
gi|356739434|gb|EHI64666.1| GTP-binding protein Era [Streptococcus pseudoporcinus LQ 940-04]
Length = 299
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEQEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S D ++ +V A + + D+++ E + + K +P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERLRNAK--IPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ + + + L G Y+P D +++HP
Sbjct: 126 VHPDQLLEQIDDFRSQMDFKEIVPISALEGNNIPTLMSLLTDNLEEGFQYFPADQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + E+P++ V + S K + K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDEDSDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|334705878|ref|ZP_08521744.1| GTPase Era [Aeromonas caviae Ae398]
Length = 299
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 169/290 (58%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRILGI + +Q I DTPG+ ++
Sbjct: 11 AIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEENHQTIYVDTPGLHIEEK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ + +V +VD + + +L G H K P++L +NK D
Sbjct: 71 RAINRLMNRAATSSLGDVAMVVFVVDGTHWTKDDEMVL--GKLRHL-KCPVVLAVNKIDN 127
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K E + LEW + + ++P+SA+ G VE IR+W LP ++P+D V++
Sbjct: 128 VKEKEDLLPHLEWLGQQMNFAHILPISAEKGTNVEKIREWAKDLLPENVHFFPEDYVTDR 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ E+PY+ V + +K I I+VE+ QK ++IG
Sbjct: 188 SSRFMASEIIREKLMRFTGEELPYSVTVEIERFKVEENGLYHIHGLILVEREGQKKMVIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ +K + T AR+D+E Q KV+LE+ VKVK W DE L+ GYG
Sbjct: 248 NKGEKIKTIGTEARIDMERLFQNKVHLELWVKVKSGWADDERALRSLGYG 297
>gi|300812180|ref|ZP_07092622.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|313123894|ref|YP_004034153.1| GTP-binding protein era-like protein [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|422843871|ref|ZP_16890581.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
gi|300496816|gb|EFK31896.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|312280457|gb|ADQ61176.1| GTP-binding protein era-like protein [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|325686031|gb|EGD28089.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 301
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 176/296 (59%), Gaps = 12/296 (4%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q++ DTPG
Sbjct: 7 HKSGFVALVGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKISGIYTEDDMQVVFVDTPG 66
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGV-GDHKD-KLPIL 226
I K LD M K S+ + D ++ +VDA +A + EE V G KD +P+
Sbjct: 67 IF-KSHSDLDEYMDKASLSSLKDVDLVMFMVDAKEAGKG-----EEYVAGLLKDLDIPVF 120
Query: 227 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
LV+NK D + P ++ ++ Y+ E +P+SA+ G+GV+D+ + LP GP YY
Sbjct: 121 LVINKIDQVHPNDLLPIIDSYQAVGKFAEFLPISARQGNGVDDLLKTLKDYLPEGPQYYA 180
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
D V++ PE F V E+IRE+I EVP++ V V R K I I VEK+
Sbjct: 181 SDEVTDRPEYFVVAEMIREQILRLTDQEVPHSTAVWVDQMNQRINGKLQIDATIFVEKDG 240
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IG+ G +K + +R +IE+ L +KV L++ VKV+ +WRQD LK GY
Sbjct: 241 QKRIIIGQRGSMIKQIGMRSRKEIENLLGEKVNLKLWVKVRRDWRQDPAFLKSIGY 296
>gi|375266664|ref|YP_005024107.1| GTPase Era [Vibrio sp. EJY3]
gi|369841984|gb|AEX23128.1| GTPase Era [Vibrio sp. EJY3]
Length = 320
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 184/329 (55%), Gaps = 19/329 (5%)
Query: 76 EFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQK 135
EFD + F S E +SP++ H +++G+PNVGKSTL N+++GQK
Sbjct: 5 EFDIDAYFASHGE-----TSSPEN---------QHCGFIAIVGRPNVGKSTLLNKILGQK 50
Query: 136 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 195
+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + +
Sbjct: 51 ISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLV 110
Query: 196 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVD 254
LVD + + +L + K P++L +NK D ++ E+ + K D
Sbjct: 111 FFLVDGTHWTKDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNEVMMHMADMSKKMDFV 167
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 314
+V+P+SAK G ++ +R + LP+ ++P++ V++ +RF EI+REK+ E
Sbjct: 168 DVVPISAKQGKNIDVLRKHVRDHLPVATHHFPEEYVTDRSQRFMASEIVREKLMRFTGEE 227
Query: 315 VPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDF 373
+PY+ V + + P F I I+VE++ QK ++IGKGG+ +K + ARLD+E+
Sbjct: 228 LPYSVTVEIERFDYNPETDGFHINALILVERSGQKKMVIGKGGEKIKTIGREARLDMEEL 287
Query: 374 LQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+KVYLE VKVK W DE L+ GY
Sbjct: 288 FGRKVYLETWVKVKSGWADDERALRSLGY 316
>gi|421188898|ref|ZP_15646230.1| GTPase [Oenococcus oeni AWRIB419]
gi|399964231|gb|EJN98885.1| GTPase [Oenococcus oeni AWRIB419]
Length = 305
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 176/299 (58%), Gaps = 15/299 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR++I GI + E Q++ DTPG I K
Sbjct: 11 AIIGRPNVGKSTLLNYIIGQKVTIISSKAQTTRNKIAGIYTTEEAQVVFLDTPG-IHKPY 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ LD M K A AD + +VDA + D + E + K+ PI L++NK DL
Sbjct: 70 NSLDEYMEKASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKIKNT-PIYLLVNKIDL 128
Query: 235 IKPGEIAKKLEWYEKFT-------DVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
IK KK + ++ + D EV P+SAK G V + D ++ KL GP Y+ K
Sbjct: 129 IK-----KKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIEKLHPGPQYFSK 183
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 346
+ +++HPERF V E+IREKI EVP++ V + S K + IQ IVVE++S
Sbjct: 184 EQITDHPERFLVAELIREKILQLTEQEVPHSIAVVIDSMKKDGVNEKLHIQASIVVERSS 243
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
QK I+IGK G +K + AR DIE+ L ++VYLE VKV+ WR+ L+ GY +
Sbjct: 244 QKNIIIGKQGNMIKRIGQLARKDIENLLGERVYLETWVKVEARWRERPQALQELGYNSK 302
>gi|118586863|ref|ZP_01544297.1| GTP-binding protein Era [Oenococcus oeni ATCC BAA-1163]
gi|118432695|gb|EAV39427.1| GTP-binding protein Era [Oenococcus oeni ATCC BAA-1163]
Length = 309
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 176/299 (58%), Gaps = 15/299 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR++I GI + E Q++ DTPG I K
Sbjct: 15 AIIGRPNVGKSTLLNYIIGQKVAIISSKAQTTRNKIAGIYTTEEAQVVFLDTPG-IHKPY 73
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ LD M K A AD + +VDA + D + E + K+ PI L++NK DL
Sbjct: 74 NSLDEYMEKASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKIKNT-PIYLLVNKIDL 132
Query: 235 IKPGEIAKKLEWYEKFT-------DVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
IK KK + ++ + D EV P+SAK G V + D ++ KL GP Y+ K
Sbjct: 133 IK-----KKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIEKLHPGPQYFSK 187
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 346
+ +++HPERF V E+IREKI EVP++ V + S K + IQ IVVE++S
Sbjct: 188 EQITDHPERFLVAELIREKILQLTEQEVPHSIAVVIDSMKKDGVNEKLHIQASIVVERSS 247
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
QK I+IGK G +K + AR DIE+ L ++VYLE VKV+ WR+ L+ GY +
Sbjct: 248 QKNIIIGKQGNMIKRIGQLARKDIENLLGERVYLETWVKVEARWRERPQALQELGYNSK 306
>gi|313892377|ref|ZP_07825969.1| ribosome biogenesis GTPase Era [Dialister microaerophilus UPII
345-E]
gi|313119236|gb|EFR42436.1| ribosome biogenesis GTPase Era [Dialister microaerophilus UPII
345-E]
Length = 301
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 174/303 (57%), Gaps = 23/303 (7%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N ++G+K+SIV+ QTTR++I G+ +G Q++ DTPG+
Sbjct: 8 HSGFIALVGRPNVGKSTLLNTVLGEKISIVSAHAQTTRNKITGVWNGENSQIVFLDTPGM 67
Query: 170 IEKKIHMLDSMMMKNVRSAGINADC---IVVLVDACKAPERIDEILEEGVGDH------- 219
H S + + +R + ++A IVV++ AC P G GD
Sbjct: 68 -----HKPKSKLGEVIRQSTVDAIGEVDIVVMICACDDPP--------GAGDRYLLSLLE 114
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 279
K P++LVLNK DL+ I KK++ Y + + E+IPVSA+ G ++++ + LP
Sbjct: 115 NKKTPVVLVLNKIDLVSEVAILKKIKQYSQMYNFKEIIPVSAQTGRNMDELMQVLEKMLP 174
Query: 280 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 339
GP Y+P D++++ PER V EI+REKI ++ E+P+A V +K R K +I+
Sbjct: 175 EGPKYFPDDMITDQPERIIVQEIVREKILLRTHEEIPHAIGVFTEEFKVRENGKVYIRCT 234
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE+ SQK I+IG G LK AR +I+ + V+L++ VKV +W+ + +L+
Sbjct: 235 IYVERESQKRIVIGSKGSLLKDAGKEAREEIQKVVGSPVFLDLWVKVNRDWKNKDYMLRE 294
Query: 400 YGY 402
GY
Sbjct: 295 LGY 297
>gi|398831536|ref|ZP_10589714.1| GTP-binding protein Era [Phyllobacterium sp. YR531]
gi|398212243|gb|EJM98852.1| GTP-binding protein Era [Phyllobacterium sp. YR531]
Length = 312
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 174/290 (60%), Gaps = 9/290 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PN GKSTL NQ++G K+SIVT+K QTTR + GI + QM+L DTPGI + K
Sbjct: 24 ALIGAPNAGKSTLVNQLVGSKVSIVTHKVQTTRALVRGIVIHEQTQMVLVDTPGIFKPK- 82
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
LD M+ +AD I+VL+D + + EIL E + D K K ++LVLNK D
Sbjct: 83 RRLDRAMVTTAWGGAKDADLILVLIDVEQGIDDEAEILLESLRDKKRK--VILVLNKVDR 140
Query: 235 IKPG---EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
I+ E+AKK KF D+ +SA G+G +D+ ++ LP GP YYP+D +S
Sbjct: 141 IEAPMLLELAKKANEKVKF---DQTFMISALKGYGCKDLLKYLAENLPEGPWYYPEDQIS 197
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ P R EI REK++++ NE+PY+ V S++ + IQ I VE++SQK I+
Sbjct: 198 DMPMRMLAAEITREKLYLRLHNELPYSSTVETESWEEKKDGSVRIQQVIYVERDSQKKIV 257
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
+G G+A+K + AAR ++ + L++KV+L + VKV++NW D + G
Sbjct: 258 LGHEGQAIKSIGQAARKELMEILEQKVHLFLFVKVRDNWGNDPERYREMG 307
>gi|116491019|ref|YP_810563.1| GTPase [Oenococcus oeni PSU-1]
gi|290890500|ref|ZP_06553575.1| hypothetical protein AWRIB429_0965 [Oenococcus oeni AWRIB429]
gi|419758833|ref|ZP_14285145.1| GTPase [Oenococcus oeni AWRIB304]
gi|419857741|ref|ZP_14380444.1| GTPase [Oenococcus oeni AWRIB202]
gi|419859529|ref|ZP_14382183.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421185418|ref|ZP_15642829.1| GTPase [Oenococcus oeni AWRIB318]
gi|421189683|ref|ZP_15646997.1| GTPase [Oenococcus oeni AWRIB422]
gi|421190860|ref|ZP_15648144.1| GTPase [Oenococcus oeni AWRIB548]
gi|421193624|ref|ZP_15650870.1| GTPase [Oenococcus oeni AWRIB553]
gi|421195336|ref|ZP_15652544.1| GTPase [Oenococcus oeni AWRIB568]
gi|421197449|ref|ZP_15654624.1| GTPase [Oenococcus oeni AWRIB576]
gi|116091744|gb|ABJ56898.1| GTPase [Oenococcus oeni PSU-1]
gi|290479896|gb|EFD88545.1| hypothetical protein AWRIB429_0965 [Oenococcus oeni AWRIB429]
gi|399904288|gb|EJN91744.1| GTPase [Oenococcus oeni AWRIB304]
gi|399964599|gb|EJN99240.1| GTPase [Oenococcus oeni AWRIB318]
gi|399971783|gb|EJO06022.1| GTPase [Oenococcus oeni AWRIB553]
gi|399972773|gb|EJO06972.1| GTPase [Oenococcus oeni AWRIB422]
gi|399973556|gb|EJO07721.1| GTPase [Oenococcus oeni AWRIB548]
gi|399975058|gb|EJO09126.1| GTPase [Oenococcus oeni AWRIB576]
gi|399975761|gb|EJO09796.1| GTPase [Oenococcus oeni AWRIB568]
gi|410496546|gb|EKP88029.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497212|gb|EKP88687.1| GTPase [Oenococcus oeni AWRIB202]
Length = 305
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 176/299 (58%), Gaps = 15/299 (5%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I+++K QTTR++I GI + E Q++ DTPG I K
Sbjct: 11 AIIGRPNVGKSTLLNYIIGQKVAIISSKAQTTRNKIAGIYTTEEAQVVFLDTPG-IHKPY 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ LD M K A AD + +VDA + D + E + K+ PI L++NK DL
Sbjct: 70 NSLDEYMEKASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKIKNT-PIYLLVNKIDL 128
Query: 235 IKPGEIAKKLEWYEKFT-------DVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
IK KK + ++ + D EV P+SAK G V + D ++ KL GP Y+ K
Sbjct: 129 IK-----KKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIEKLHPGPQYFSK 183
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 346
+ +++HPERF V E+IREKI EVP++ V + S K + IQ IVVE++S
Sbjct: 184 EQITDHPERFLVAELIREKILQLTEQEVPHSIAVVIDSMKKDGVNEKLHIQASIVVERSS 243
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
QK I+IGK G +K + AR DIE+ L ++VYLE VKV+ WR+ L+ GY +
Sbjct: 244 QKNIIIGKQGNMIKRIGQLARKDIENLLGERVYLETWVKVEARWRERPQALQELGYNSK 302
>gi|195978544|ref|YP_002123788.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|414564511|ref|YP_006043472.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|226741237|sp|B4U458.1|ERA_STREM RecName: Full=GTPase Era
gi|195975249|gb|ACG62775.1| GTP-binding protein Era-like [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|338847576|gb|AEJ25788.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 298
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + ++P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAARIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ VE + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLVQLLKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ + EVP++ V V S K T K I+V I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMVREKVLHLTQQEVPHSVAVVVDSMKRDEVTDKVHIRVTIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGAMLKKIGKLARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|423070294|ref|ZP_17059070.1| GTP-binding protein era [Streptococcus intermedius F0413]
gi|355366615|gb|EHG14333.1| GTP-binding protein era [Streptococcus intermedius F0413]
Length = 299
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 181/292 (61%), Gaps = 4/292 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTDMEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIMERL--KAAKIPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + + E++P+SA G+ V + + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRTQMEFKEIVPISALQGNNVSRLMELLTENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKILKLTEQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY G+
Sbjct: 246 KQGAMLKKIGKMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYNGK 297
>gi|303228934|ref|ZP_07315744.1| GTP-binding protein Era [Veillonella atypica ACS-134-V-Col7a]
gi|429759512|ref|ZP_19292010.1| ribosome biogenesis GTPase Era [Veillonella atypica KON]
gi|302516348|gb|EFL58280.1| GTP-binding protein Era [Veillonella atypica ACS-134-V-Col7a]
gi|429179473|gb|EKY20720.1| ribosome biogenesis GTPase Era [Veillonella atypica KON]
Length = 299
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKST+ N +IG K++IV++K QTTR+RI+ + + E Q++ DTPG+ + K
Sbjct: 13 AVVGRPNVGKSTMINALIGDKIAIVSDKAQTTRNRIICVYTDEEKQIVFMDTPGVHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 72 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVVNKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++ + + Y+ VIP+SAK + ++ + + LP GP Y+P+D++++ P
Sbjct: 130 LQKEQVLEAIVSYQDAYPFAGVIPISAKNKENLSELLNVLGEHLPEGPQYFPEDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK I+IG
Sbjct: 190 ERLIISDIVREKILLSTRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGN 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G L+ + AR+DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 250 KGALLRKIGAEARMDIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGY 297
>gi|418028968|ref|ZP_12667517.1| hypothetical protein LDBUL1632_00311 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|418035644|ref|ZP_12674097.1| hypothetical protein LDBUL1519_00797 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354689971|gb|EHE89936.1| hypothetical protein LDBUL1519_00797 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354691305|gb|EHE91243.1| hypothetical protein LDBUL1632_00311 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 288
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 173/289 (59%), Gaps = 8/289 (2%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q++ DTPGI K
Sbjct: 1 MVGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKISGIYTEDDMQVVFVDTPGIF-KSHS 59
Query: 176 MLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGV-GDHKD-KLPILLVLNKKD 233
LD M K S+ + D ++ +VDA +A + EE V G KD +P+ LV+NK D
Sbjct: 60 DLDEYMDKASLSSLKDVDLVMFMVDAKEAGKG-----EEYVAGLLKDLDIPVFLVINKID 114
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P E+ ++ Y+ E +P+SA+ G+GV+D+ + LP GP YY D +++
Sbjct: 115 QVHPNELLPIIDSYQAVGKFAEFLPISARQGNGVDDLLKTLKDYLPEGPQYYASDEITDR 174
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PE F V E+IRE+I EVP++ V V R K I I VEK+ QK I+IG
Sbjct: 175 PEYFVVAEMIREQILRLTDQEVPHSTAVWVDQMNQRINGKLQIDATIFVEKDGQKRIIIG 234
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ G +K + +R +IE+ L +KV L++ VKV+ +WRQD LK GY
Sbjct: 235 QRGSMIKQIGMRSRKEIENLLGEKVNLKLWVKVRRDWRQDPAFLKSIGY 283
>gi|91227851|ref|ZP_01262024.1| GTP-binding protein Era [Vibrio alginolyticus 12G01]
gi|269965786|ref|ZP_06179883.1| GTP-binding protein [Vibrio alginolyticus 40B]
gi|91188361|gb|EAS74657.1| GTP-binding protein Era [Vibrio alginolyticus 12G01]
gi|269829654|gb|EEZ83891.1| GTP-binding protein [Vibrio alginolyticus 40B]
Length = 320
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 183/329 (55%), Gaps = 19/329 (5%)
Query: 76 EFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQK 135
EFD + F S E +SP++ H +++G+PNVGKSTL N+++GQK
Sbjct: 5 EFDIDAFFASQGEP-----SSPEN---------QHCGFIAIVGRPNVGKSTLLNKILGQK 50
Query: 136 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 195
+SI + KPQTTRHRI+G+ + +YQ I DTPG+ ++ ++ +M + S+ + + +
Sbjct: 51 ISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLV 110
Query: 196 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKP-GEIAKKLEWYEKFTDVD 254
LVD + + +L + K P++L +NK D ++ ++ + K D
Sbjct: 111 FFLVDGTHWTKDDEMVLTKL---QKSNFPVVLCVNKVDNVQDRNDVMLHMAEMSKKMDFV 167
Query: 255 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 314
+V+P+SAK G ++ +R + LP ++P++ V++ +RF EI+REK+ E
Sbjct: 168 DVVPISAKQGKNIDVLRKHVRNHLPKATHHFPEEYVTDRSQRFMASEIVREKLMRFTGEE 227
Query: 315 VPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDF 373
+PY+ V + + P F I I+VE+N QK ++IGKGG+ +K + ARLD+E+
Sbjct: 228 LPYSVTVEIERFDYNPETDGFHINALILVERNGQKKMVIGKGGEKIKTIGREARLDMEEL 287
Query: 374 LQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+KVYLE VKVK W DE L+ GY
Sbjct: 288 FGRKVYLETWVKVKSGWADDERALRSLGY 316
>gi|160901780|ref|YP_001567361.1| GTP-binding protein Era [Petrotoga mobilis SJ95]
gi|160359424|gb|ABX31038.1| GTP-binding protein Era [Petrotoga mobilis SJ95]
Length = 306
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 176/289 (60%), Gaps = 9/289 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++ GKPNVGKSTL N ++GQK+ IV++K QTTR+R+ I + YQ++ DTPGI K I
Sbjct: 12 ALAGKPNVGKSTLINALLGQKVVIVSDKTQTTRNRVNCILTEDHYQIVFVDTPGI-HKPI 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ M+ +A D I+ ++DA D + E V K K+P +L++NK DL
Sbjct: 71 RKIGEYMVNIAINALKGVDLILFIIDAKDGLRNSDLRVTEIV--DKSKIPTILLVNKVDL 128
Query: 235 IKPGE----IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 290
+K E + +K++ +++ + I +SA G + +++ I+ LP GP YYP+D++
Sbjct: 129 VKDKEKINLMTEKIQSL--CSNIVKTIEISALTGKNLSELKQSIIDLLPEGPQYYPEDMI 186
Query: 291 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 350
++ P RF + E+IREKIF + E+P++ V V K R +++ EI VEK SQK I
Sbjct: 187 TDKPSRFIISELIREKIFHLTKEEIPHSSGVVVEELKERENGVLYVRAEIYVEKKSQKPI 246
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
+IGK G +K + AR DIE+ ++KVYL++ VKV+E WR D+ +L +
Sbjct: 247 IIGKNGSMIKKIGQLARQDIEELFERKVYLDLYVKVREKWRDDKNILNN 295
>gi|311110602|ref|ZP_07711999.1| GTP-binding protein Era [Lactobacillus gasseri MV-22]
gi|311065756|gb|EFQ46096.1| GTP-binding protein Era [Lactobacillus gasseri MV-22]
Length = 302
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 180/306 (58%), Gaps = 12/306 (3%)
Query: 103 EEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 162
E+ DY S +++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++
Sbjct: 3 EKKDYKS--GFVALIGRPNVGKSTLLNFLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIV 60
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDH 219
DTPGI + K + LD M K+ SA D ++ +V+ A K + I E+L+
Sbjct: 61 FIDTPGIHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------ 113
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 279
K K P+ LV+NK D + P ++ ++ Y+ D E++P+SA G+ V ++ I LP
Sbjct: 114 KIKKPVFLVINKIDKVHPDKLLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLP 173
Query: 280 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 339
GP +Y D +++ PE F V E+IRE++ EVP+A V V + K I+
Sbjct: 174 EGPQFYDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQIEAT 233
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE+ QK I+IGK G+ LK + AAR +IE L +KV L + VKV++NWR D LK
Sbjct: 234 IYVERPGQKGIIIGKKGQMLKQIGIAARQEIEALLGEKVNLRLWVKVQKNWRSDPAFLKS 293
Query: 400 YGYGGQ 405
GY +
Sbjct: 294 IGYNAK 299
>gi|90961872|ref|YP_535788.1| GTP-binding protein Era [Lactobacillus salivarius UCC118]
gi|385840478|ref|YP_005863802.1| Like GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|122449031|sp|Q1WTU6.1|ERA_LACS1 RecName: Full=GTPase Era
gi|90821066|gb|ABD99705.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214599|gb|ADJ79015.1| Like GTP-binding protein [Lactobacillus salivarius CECT 5713]
Length = 300
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 178/293 (60%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D ++ +V+A + R D+ + E + + K PI LV+
Sbjct: 66 -HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYLVI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP D
Sbjct: 123 NKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPADQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQK
Sbjct: 183 ITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDAEKVLVQATIVVERNSQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + AR DIE L KVYLE+ VKV+ NW+ + L+ GY
Sbjct: 243 IIIGKGGKMLKQIGVKARKDIELMLGDKVYLELWVKVQPNWKDRQVDLQALGY 295
>gi|329121358|ref|ZP_08249984.1| GTP-binding protein Era [Dialister micraerophilus DSM 19965]
gi|327469767|gb|EGF15233.1| GTP-binding protein Era [Dialister micraerophilus DSM 19965]
Length = 307
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 174/303 (57%), Gaps = 23/303 (7%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N ++G+K+SIV+ QTTR++I G+ +G Q++ DTPG+
Sbjct: 14 HSGFIALVGRPNVGKSTLLNTVLGEKISIVSAHAQTTRNKITGVWNGENSQIVFLDTPGM 73
Query: 170 IEKKIHMLDSMMMKNVRSAGINADC---IVVLVDACKAPERIDEILEEGVGDH------- 219
H S + + +R + ++A IVV++ AC P G GD
Sbjct: 74 -----HKPKSKLGEVIRQSTVDAIGEVDIVVMLCACDDPP--------GAGDRYLLSLLE 120
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 279
K P++LVLNK DL+ I KK++ Y + + E+IPVSA+ G ++++ + LP
Sbjct: 121 NKKTPVVLVLNKIDLVSEVAILKKIKQYSQMYNFKEIIPVSAQTGRNMDELMQVLEKMLP 180
Query: 280 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 339
GP Y+P D++++ PER V EI+REKI ++ E+P+A V +K R K +I+
Sbjct: 181 EGPKYFPDDMITDQPERIIVQEIVREKILLRTHEEIPHAIGVFTEEFKVRENGKVYIRCT 240
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE+ SQK I+IG G LK AR +I+ + V+L++ VKV +W+ + +L+
Sbjct: 241 IYVERESQKRIVIGSKGSLLKDAGKEAREEIQKVVGSPVFLDLWVKVNRDWKNKDYMLRE 300
Query: 400 YGY 402
GY
Sbjct: 301 LGY 303
>gi|116629756|ref|YP_814928.1| GTP-binding protein Era [Lactobacillus gasseri ATCC 33323]
gi|420147062|ref|ZP_14654338.1| GTPase Era [Lactobacillus gasseri CECT 5714]
gi|116095338|gb|ABJ60490.1| GTPase [Lactobacillus gasseri ATCC 33323]
gi|398401063|gb|EJN54565.1| GTPase Era [Lactobacillus gasseri CECT 5714]
Length = 303
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 180/306 (58%), Gaps = 12/306 (3%)
Query: 103 EEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 162
E+ DY S +++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++
Sbjct: 4 EKKDYKS--GFVALIGRPNVGKSTLLNFLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIV 61
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDH 219
DTPGI + K + LD M K+ SA D ++ +V+ A K + I E+L+
Sbjct: 62 FIDTPGIHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------ 114
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 279
K K P+ LV+NK D + P ++ ++ Y+ D E++P+SA G+ V ++ I LP
Sbjct: 115 KIKKPVFLVINKIDKVHPDKLLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLP 174
Query: 280 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 339
GP +Y D +++ PE F V E+IRE++ EVP+A V V + K I+
Sbjct: 175 EGPQFYDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQIEAT 234
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE+ QK I+IGK G+ LK + AAR +IE L +KV L + VKV++NWR D LK
Sbjct: 235 IYVERPGQKGIIIGKKGQMLKQIGIAARQEIEALLGEKVNLRLWVKVQKNWRSDPAFLKS 294
Query: 400 YGYGGQ 405
GY +
Sbjct: 295 IGYNAK 300
>gi|295109868|emb|CBL23821.1| GTP-binding protein Era [Ruminococcus obeum A2-162]
Length = 302
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 172/293 (58%), Gaps = 11/293 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N +IGQK++I + KPQTTR+RI + + + Q++ DTPGI + K
Sbjct: 11 AIIGRPNVGKSTLMNHLIGQKIAITSKKPQTTRNRIQTVYTCDDGQIVFLDTPGIHKAK- 69
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILEEGVGDHKDKLPILLVLNK 231
+ L M++ + D I+ LV+ A ER I E+ G H +P++LV+NK
Sbjct: 70 NKLGEYMVQVAERTLKDVDVILWLVEPTTFIGAGER--HIAEQLQGLH---IPVILVINK 124
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + EI K ++ Y K D DE+IP SA EDI IL LP GP +Y +D V+
Sbjct: 125 VDTVDKDEILKAIDTYRKLYDFDEIIPCSALRNQNTEDIIPSILKYLPYGPMFYDEDTVT 184
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQKI 349
+ P+R EIIREK E+P+ V + K RP + ++ I+ E++S K
Sbjct: 185 DQPQRQIAAEIIREKALHALDAEIPHGIAVAIDRMKERPGKNRLVDIDATIICERDSHKG 244
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGK G LK + + AR ++E L KV L++ VKVK++WR + ++K++GY
Sbjct: 245 IIIGKQGAMLKKIGSNARYELERMLDAKVNLKLWVKVKKDWRDSDFMIKNFGY 297
>gi|406981904|gb|EKE03291.1| hypothetical protein ACD_20C00224G0004 [uncultured bacterium]
Length = 297
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 181/300 (60%), Gaps = 25/300 (8%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N+++GQK+ I ++KPQTTR RI GI + + Q+I DTPG I K +
Sbjct: 9 SIIGRPNVGKSTLLNKIVGQKIVITSDKPQTTRRRIRGIYTSEKGQIIFVDTPG-IHKPL 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L +++ R A ++D I+ LVD + + G GD + +PI++
Sbjct: 68 HKLGEFLLQEARLAVPDSDLILYLVDGTE---------KAGPGDRWIINNLLETDIPIIM 118
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDV--DEVIP---VSAKYGHGVEDIRDWILTKLPLGP 282
V+NK DLIK E K+ E E + ++ + IP +SAK G ++D+ I KLP GP
Sbjct: 119 VVNKADLIKSTE--KRDENIESYKELFKERSIPTVKISAKTGRNIDDLIKNIYRKLPKGP 176
Query: 283 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 342
YYP + +++ R V E+IRE+I + R E+P++ V + +Y+ +P I I
Sbjct: 177 QYYPDEEITDQNMRTIVEEMIRERILVNTREEIPHSVAVVIDTYEEKPNIVS-IAATIYA 235
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
E++SQK I+IG G +K + + AR +IE L+ KV+LE+ VKVK++WR+ + LK +GY
Sbjct: 236 EQDSQKGIIIGDKGSMIKKIGSEARTEIEKVLETKVFLELFVKVKKDWRKKDLSLKEFGY 295
>gi|293609825|ref|ZP_06692127.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024]
gi|427424847|ref|ZP_18914959.1| GTP-binding protein Era [Acinetobacter baumannii WC-136]
gi|292828277|gb|EFF86640.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024]
gi|425698164|gb|EKU67808.1| GTP-binding protein Era [Acinetobacter baumannii WC-136]
Length = 342
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 43 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEV 102
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ ++DA K + D +LE+ ++P++LV+NK D
Sbjct: 103 RAINKMMNRAAHSALRDVNLVLFVIDAYKWTQNDDLVLEKL---KNAEMPVILVINKADT 159
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ EI ++ K + E++PVSA G +E + + I LP P Y D +++
Sbjct: 160 FEDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYSFDQITDR 219
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDFIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT A +I I V
Sbjct: 220 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTYIDATIFV 279
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ QK I+IG+ G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 280 DRAGQKAIVIGEKGTKLKTIGMDARKDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 339
Query: 403 G 403
Sbjct: 340 S 340
>gi|374334747|ref|YP_005091434.1| GTPase Era [Oceanimonas sp. GK1]
gi|372984434|gb|AEY00684.1| GTPase Era [Oceanimonas sp. GK1]
Length = 301
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 174/290 (60%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+GI + YQ++ DTPG+ ++
Sbjct: 13 AIVGRPNVGKSTLLNRLLGQKVSITSKKPQTTRHRIMGIDTDGAYQVVYVDTPGLHIEEK 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ + + +V +VD + + D +L + + P++L +NK D
Sbjct: 73 RAINRLMNRAASSSLGDVEMVVFVVDGTQWTKDDDMVLNKL---RRMDCPVVLAINKIDN 129
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ E + ++W + D +++P+SA+ G V+ I ++L Y+P+D +++
Sbjct: 130 VDNKEALLPHMQWLAQQMDFADIVPISAEKGTNVDTIAKLARSRLKPSLHYFPEDYITDR 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ +E+PY+ V + Y+T I I+VE++ QK ++IG
Sbjct: 190 SARFMAAEIIREKLMRFTGDELPYSITVEIERYQTDEKGVVHINGLILVERSGQKRMVIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ L+ + T ARLD+E L++KVYLE+ VKVK W DE L+ GYG
Sbjct: 250 NKGEKLRTIGTEARLDLERLLEQKVYLELWVKVKSGWADDERALRSLGYG 299
>gi|417810225|ref|ZP_12456904.1| GTP-binding protein Era [Lactobacillus salivarius GJ-24]
gi|335349021|gb|EGM50521.1| GTP-binding protein Era [Lactobacillus salivarius GJ-24]
Length = 300
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 178/293 (60%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D ++ +V+A + R D+ + E + + K PI LV+
Sbjct: 66 -HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYLVI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP D
Sbjct: 123 NKIDQIHPDKLLQIMDEYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPADQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQK
Sbjct: 183 ITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + AR DIE L KVYLE+ VKV+ NW+ + L+ GY
Sbjct: 243 IIIGKGGKMLKQIGVKARKDIELMLGDKVYLELWVKVQPNWKDRQVDLQALGY 295
>gi|401679834|ref|ZP_10811758.1| GTP-binding protein Era [Veillonella sp. ACP1]
gi|400218961|gb|EJO49832.1| GTP-binding protein Era [Veillonella sp. ACP1]
Length = 299
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+V+G+PNVGKST+ N +IG K++IV++K QTTR+RI+ + + E Q++ DTPG+ + K
Sbjct: 13 AVVGRPNVGKSTMINALIGDKIAIVSDKAQTTRNRIICVYTDEEKQIVFMDTPGVHKPK- 71
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M+ + + ++ +V + D + E + + K+P+ LV+NK D
Sbjct: 72 HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVVNKIDT 129
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
++ ++ + + Y+ VIP+SAK + ++ + + LP GP Y+P+D++++ P
Sbjct: 130 LQKEQVLEAIVSYQDAYPFAGVIPISAKNKENLSELLNVLGEHLPEGPQYFPEDMITDQP 189
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
ER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK I+IG
Sbjct: 190 ERLIISDIVREKILLSTRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKGIIIGN 249
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
G L+ + AR+DI+ L KVYL++ VKVK++WR G+L GY
Sbjct: 250 KGALLRKIGAEARMDIQKLLATKVYLDLWVKVKKDWRNKSGVLSELGY 297
>gi|17228407|ref|NP_484955.1| GTP-binding protein Era [Nostoc sp. PCC 7120]
gi|17130258|dbj|BAB72869.1| GTP-binding protein [Nostoc sp. PCC 7120]
Length = 337
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 175/293 (59%), Gaps = 15/293 (5%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DTPG I K H
Sbjct: 50 IIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQLIFVDTPG-IHKPHH 108
Query: 176 MLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDKLPILLVLNK 231
L +++KN + A + D ++ +VD AC A +R I ++L K P++L +NK
Sbjct: 109 QLGEVLVKNAKLAIESVDVVLFVVDGAVACGAGDRFIADLLIH------SKTPVILGINK 162
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
D +P + K E Y++ + + SAK G + +++ ++ L GP YYP D+
Sbjct: 163 VDQ-QPPDSQKIDESYQQLASAYQWPTVKFSAKTGAELPQLQELLVEHLEHGPYYYPPDL 221
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++ PERF +GE+IRE+I + R EVP++ + + + PT + I VE++SQK
Sbjct: 222 VTDQPERFIMGELIREQILLLTREEVPHSVAIAIDLVEETPTITRVLAT-IHVERDSQKG 280
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIGKGG LK + +AAR I+ + KVYLE+ VKV+ WR L GY
Sbjct: 281 ILIGKGGSMLKSIGSAAREQIQKLIAGKVYLELFVKVQPKWRHSRVRLAELGY 333
>gi|423078917|ref|ZP_17067593.1| ribosome biogenesis GTPase Era [Lactobacillus rhamnosus ATCC 21052]
gi|357548820|gb|EHJ30679.1| ribosome biogenesis GTPase Era [Lactobacillus rhamnosus ATCC 21052]
Length = 278
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 172/281 (61%), Gaps = 17/281 (6%)
Query: 129 NQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSA 188
N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPGI + K + LD M K S
Sbjct: 2 NRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK-NELDDYMDKAALST 60
Query: 189 GINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILLVLNKKDLIKPGEIA 241
D I+ +V A DE ++G GD + K P+ L+LNK DL+KP ++
Sbjct: 61 LNQVDAILFMVAA-------DE--QKGAGDAYILRQLAEVKKPVYLILNKIDLVKPDDLL 111
Query: 242 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 301
+E Y+ +V P+SA G+ V+++ + + LP GP YYP+D +++HPE F VGE
Sbjct: 112 PLIESYQHDYHFAQVFPISATMGNNVDELLNSLTATLPEGPQYYPEDQLTDHPEYFVVGE 171
Query: 302 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKL 361
+IREKI R+EVP+A V V K R K I+ I+VE++SQK I+IG+GG+ LK
Sbjct: 172 LIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYIIVERDSQKGIIIGRGGQMLKQ 231
Query: 362 LATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ AR DIE+ L KV L++ V+V++NWR + LK GY
Sbjct: 232 IGIRARRDIENLLGDKVNLKLWVRVQKNWRDNNAYLKSLGY 272
>gi|375135606|ref|YP_004996256.1| GTP-binding protein Era [Acinetobacter calcoaceticus PHEA-2]
gi|325123051|gb|ADY82574.1| GTP-binding protein Era [Acinetobacter calcoaceticus PHEA-2]
Length = 340
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 41 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEV 100
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ ++DA K + D +LE+ ++P++LV+NK D
Sbjct: 101 RAINKMMNRAAHSALRDVNLVLFVIDAYKWTQNDDLVLEKL---KNAEMPVILVINKADT 157
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ EI ++ K + E++PVSA G +E + + I LP P Y D +++
Sbjct: 158 FEDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYSFDQITDR 217
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDFIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT A +I I V
Sbjct: 218 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTYIDATIFV 277
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ QK I+IG+ G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 278 DRAGQKAIVIGEKGTKLKTIGMDARKDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 337
Query: 403 G 403
Sbjct: 338 S 338
>gi|225870931|ref|YP_002746878.1| GTP-binding protein Era [Streptococcus equi subsp. equi 4047]
gi|254783664|sp|C0MBF0.1|ERA_STRE4 RecName: Full=GTPase Era
gi|225700335|emb|CAW94640.1| GTP-binding protein Era homolog [Streptococcus equi subsp. equi
4047]
Length = 298
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++++++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAVMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + ++P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAARIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ VE + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLVQLLKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ + EVP++ V V S K T K I+V I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMVREKVLHLTQQEVPHSVAVVVDSMKRDEVTDKVHIRVTIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGAMLKKIGKLARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|409386470|ref|ZP_11238868.1| GTP-binding protein Era [Lactococcus raffinolactis 4877]
gi|399206264|emb|CCK19783.1| GTP-binding protein Era [Lactococcus raffinolactis 4877]
Length = 311
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 176/289 (60%), Gaps = 4/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++GQK++I+++K QTTR++I GI + Q++ DTPGI K
Sbjct: 21 SIIGRPNVGKSTLLNHVMGQKIAIMSDKAQTTRNKIQGIYTTENEQIVFIDTPGI-HKPH 79
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+++ S D ++ +V A + + D ++ E + + +P++LV+NK D
Sbjct: 80 NALGDYMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQANVPVILVVNKIDK 137
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ +++ + D EV+P+SA G+ E + + + + L G Y+P D++++HP
Sbjct: 138 VHPDQLLAQIDDFRTQMDFKEVVPISALEGNNTEKLLEILKSNLEEGFKYFPDDMITDHP 197
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
E F VGE+IREK+ + R EVP++ V V S K T K I I VE+ SQK I++G
Sbjct: 198 EHFLVGEMIREKVLILTREEVPHSIAVTVDSMKRDEDTGKIHIMATIYVERKSQKGIILG 257
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
KGG ++ + AR DIE L KVYLE VK+K NWR + ++ GY
Sbjct: 258 KGGDMIRKVGKMARRDIEVMLGDKVYLETWVKIKSNWRDKKIDIQAMGY 306
>gi|83951644|ref|ZP_00960376.1| GTP-binding protein Era [Roseovarius nubinhibens ISM]
gi|83836650|gb|EAP75947.1| GTP-binding protein Era [Roseovarius nubinhibens ISM]
Length = 301
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 165/277 (59%), Gaps = 3/277 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PN GKSTL N+M+G K+SIVT+K QTTR RI G+ E Q++ DTPG+ + +
Sbjct: 9 ALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVALEGEAQLVFVDTPGLFKPR- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLVLNKKD 233
LD M+ +AD +V+L++A + E ++ ILE G+GD P+ L +NK D
Sbjct: 68 RRLDRAMVAAAWGGASDADVVVLLIEAHRGLTEGVERILE-GLGDVTRGRPVALAINKID 126
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K E+ E + E +SA+ GHGV+D+R W+ +LP GP YP+D +++
Sbjct: 127 RVKSEELLALTEKMNTRHEFVETFMISAERGHGVDDLRKWLAEQLPEGPWLYPEDQIADL 186
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
P R EI REK+ ++ E+PY V S++ R I I V ++ K I++G
Sbjct: 187 PMRMIAAEITREKLTLRLHQELPYQLTVETESWEERKDGTARIDQVIYVSRDGHKGIVLG 246
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENW 390
G+ +K ++ AAR ++E+FL ++V+L +VKV+ NW
Sbjct: 247 HKGETMKAISKAAREELEEFLGRRVHLFTQVKVRPNW 283
>gi|77411686|ref|ZP_00788025.1| GTP-binding protein Era [Streptococcus agalactiae CJB111]
gi|77162258|gb|EAO73230.1| GTP-binding protein Era [Streptococcus agalactiae CJB111]
Length = 299
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 179/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVSTLIKLLTDNLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|333904564|ref|YP_004478435.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|333119829|gb|AEF24763.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|456370421|gb|EMF49317.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
gi|457095981|gb|EMG26452.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 299
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + + K +P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVETVIFMVPADEKRGKGDDMIIERLKNAK--IPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ V + + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFKEVVPISALQGNNVNPLMEILKDNLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIEVMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|310828430|ref|YP_003960787.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308740164|gb|ADO37824.1| hypothetical protein ELI_2843 [Eubacterium limosum KIST612]
Length = 304
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 176/297 (59%), Gaps = 20/297 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N ++G+KL I NKPQTTR+ I I + + QM+ DTPG+ + K
Sbjct: 17 SIIGRPNVGKSTLLNSIMGEKLVITANKPQTTRNAIRCIHTDADSQMVFIDTPGMHKPK- 75
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK--DKL-----PILL 227
+ L + M+K+ + D ++ LV+ PE D I G GD DKL P+LL
Sbjct: 76 NKLGAFMLKSAEDTISDVDVVLFLVE----PE--DRI---GPGDQYILDKLAGSRTPVLL 126
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
++NK D + E+ K + Y+ +T +D +IPVSA G GV+++ I L GP Y+P
Sbjct: 127 IINKIDTVPKEELLKTIAAYQDYTFLDSIIPVSAWNGDGVQELLAAIKKHLEPGPMYFPP 186
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 345
D+V + ERF VGE+IREK+ ++EVP+ V V K R K+ I ++ I E+
Sbjct: 187 DMVVDQSERFIVGELIREKVLHLLKDEVPHGVAVEVTKMKAR-EDKNIIDIDATIFCERK 245
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ K ILIGK G LK + T AR DIE FL+ V L++ VKV+ +WR+ LK GY
Sbjct: 246 THKGILIGKQGSMLKKIGTYARKDIEFFLKTPVNLQLWVKVRADWREKTYDLKDLGY 302
>gi|301300995|ref|ZP_07207158.1| GTP-binding protein Era [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851411|gb|EFK79132.1| GTP-binding protein Era [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 300
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 178/293 (60%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D ++ +V+A + R D+ + E + + K PI LV+
Sbjct: 66 -HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYLVI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP D
Sbjct: 123 NKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPADQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQK
Sbjct: 183 ITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + AR DIE L KVYLE+ VKV+ NW+ + L+ GY
Sbjct: 243 IIIGKGGKMLKQIGVKARKDIELMLGDKVYLELWVKVQPNWKDRQVDLQALGY 295
>gi|148656306|ref|YP_001276511.1| GTP-binding protein Era [Roseiflexus sp. RS-1]
gi|148568416|gb|ABQ90561.1| GTP-binding protein Era [Roseiflexus sp. RS-1]
Length = 451
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 175/289 (60%), Gaps = 7/289 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++IV+ KPQTTR I GI S P+ Q++ DTPGI E +
Sbjct: 167 ALVGRPNVGKSTLLNALLGQKVAIVSPKPQTTRTAIRGILSRPDAQIVFVDTPGIHEPR- 225
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L + M+K R A +AD + ++VD + P +DE + V K + +LVLNK DL
Sbjct: 226 NRLGAYMVKQARRAIPDADVVCMVVDISRPPGSLDERIAALV--RKAQARRMLVLNKIDL 283
Query: 235 -IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ G + L+ Y D + VSA G G++ + D I+ LP GP YP+ V++
Sbjct: 284 PTRSGN--EHLQAYRALAPWDMEVAVSALRGQGLDALVDEIVRLLPEGPPLYPEGQVTDQ 341
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
ER E++RE++ + EVP++ V V ++ + +I++ I+VE+ SQK ILIG
Sbjct: 342 SERELAAELVREQVLRHTQQEVPHSVAVEVEEWEEKEKIT-YIRMTILVERESQKAILIG 400
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG LK + + ARL IED L + VYL++ VK +++WR D L+ GY
Sbjct: 401 AGGSMLKKIGSGARLAIEDMLGRPVYLDLWVKARDHWRDDPNALRWLGY 449
>gi|300361843|ref|ZP_07058020.1| GTP-binding protein Era [Lactobacillus gasseri JV-V03]
gi|300354462|gb|EFJ70333.1| GTP-binding protein Era [Lactobacillus gasseri JV-V03]
Length = 303
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 180/306 (58%), Gaps = 12/306 (3%)
Query: 103 EEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 162
E+ DY S +++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++
Sbjct: 4 EKKDYKS--GFVALIGRPNVGKSTLLNFLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIV 61
Query: 163 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDH 219
DTPG+ + K + LD M K+ SA D ++ +V+ A K + I E+L+
Sbjct: 62 FIDTPGVHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------ 114
Query: 220 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 279
K K P+ LV+NK D + P ++ ++ Y+ D E++P+SA G+ V ++ I LP
Sbjct: 115 KIKKPVFLVINKIDKVHPDKLLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLP 174
Query: 280 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 339
GP +Y D +++ PE F V E+IRE++ EVP+A V V + K I+
Sbjct: 175 EGPQFYDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQIEAT 234
Query: 340 IVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKH 399
I VE+ QK I+IGK G+ LK + AAR +IE L +KV L + VKV++NWR D LK
Sbjct: 235 IYVERPGQKGIIIGKKGQMLKQIGIAARQEIEALLGEKVNLRLWVKVQKNWRSDPAFLKS 294
Query: 400 YGYGGQ 405
GY +
Sbjct: 295 IGYNAK 300
>gi|145300360|ref|YP_001143201.1| GTP-binding protein Era [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418362262|ref|ZP_12962901.1| GTPase Era [Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|142853132|gb|ABO91453.1| GTP-binding protein Era [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686524|gb|EHI51122.1| GTPase Era [Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 299
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 169/290 (58%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRILGI + +Q I DTPG+ ++
Sbjct: 11 AIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEDNHQTIYVDTPGLHIEEK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ + +V +VD + + +L G H P++L +NK D
Sbjct: 71 RAINRLMNRAATSSLGDVAMVVFVVDGTHWTKDDEMVL--GKLRHL-PCPVVLAVNKIDN 127
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K E + LEW + ++P+SA+ G VE IR+W LP ++P+D V++
Sbjct: 128 VKDKEDLLPHLEWLGQQMKFSHILPISAEKGTNVEKIREWSKDLLPENNFFFPEDYVTDR 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ E+PY+ V + +K + I I+VE++ QK ++IG
Sbjct: 188 SSRFMASEIIREKLMRFTGEELPYSVTVEIERFKVEESGIYHINALILVERDGQKKMVIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ +K + T AR+D+E Q KV+LE+ VKVK W DE L+ GYG
Sbjct: 248 NKGEKIKTIGTEARIDMERLFQNKVFLELWVKVKAGWADDERALRSLGYG 297
>gi|296112101|ref|YP_003622483.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|339490683|ref|YP_004705188.1| GTP-binding protein [Leuconostoc sp. C2]
gi|295833633|gb|ADG41514.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|338852355|gb|AEJ30565.1| GTP-binding protein [Leuconostoc sp. C2]
Length = 303
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 173/291 (59%), Gaps = 7/291 (2%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+ K
Sbjct: 12 AIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDAAQVVFIDTPGV-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K+ SA AD I +VDA R D+ + + + + PI L++NK DL
Sbjct: 71 NSLGDFMVKSAFSALHEADAIWFVVDASMPRGRGDDFIINRLQEVSNT-PIYLLINKVDL 129
Query: 235 IKPGEIAKKLEWYEKFTDV---DEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
I P ++ + Y+ TD EV P+SA+ G V ++ D I+ L GP Y+ D ++
Sbjct: 130 ISPQDLLTIIASYQ--TDAPGWTEVFPISAREGDNVPELLDNIVANLEEGPQYFDADQLT 187
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK I+
Sbjct: 188 DHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKISRENEEKIHIQASIIVERPTQKNII 247
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G +K + T AR DIE + KV+LE VKV+ WR L+ GY
Sbjct: 248 IGKQGAMIKDIGTRARKDIERLMGDKVFLETWVKVEPRWRDRPQALQSLGY 298
>gi|170725605|ref|YP_001759631.1| GTP-binding protein Era [Shewanella woodyi ATCC 51908]
gi|169810952|gb|ACA85536.1| GTP-binding protein Era [Shewanella woodyi ATCC 51908]
Length = 329
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 170/292 (58%), Gaps = 2/292 (0%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK+SI + KPQTTRHRI+GI + E Q++ DTPG+ ++
Sbjct: 39 AIVGRPNVGKSTLLNNLLGQKISITSKKPQTTRHRIMGIHTDAERQVVFIDTPGLHIEEK 98
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ ++ +VD + DE++ + D +L +NK D
Sbjct: 99 RAINRLMNRAAASSLAEVSLVIFVVDGMTWTDD-DEMVLRKLQSRDDGRKTVLAVNKVDN 157
Query: 235 IKPG-EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
IK E+ LE K DE++P+SA G V+ I D + +P P ++P+D V++
Sbjct: 158 IKDKEELFPYLEELSKKFPFDEILPISATKGTNVQRILDMSVESVPESPHFFPEDYVTDR 217
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
++F EI+REK+ +E+PY C V + +K I ++VE+ +QK ++IG
Sbjct: 218 SQKFMASEIVREKLMRFLGDELPYDCTVEIEQFKMMENGVYQINALVLVERETQKRMVIG 277
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYGGQ 405
G+ +K +++AAR+D+E KV+LE+ VKVK W DE L+ GYG +
Sbjct: 278 NKGERIKKISSAARMDMEVLFDNKVFLEMWVKVKSGWADDERALRSLGYGDE 329
>gi|229828496|ref|ZP_04454565.1| hypothetical protein GCWU000342_00558 [Shuttleworthia satelles DSM
14600]
gi|229793090|gb|EEP29204.1| hypothetical protein GCWU000342_00558 [Shuttleworthia satelles DSM
14600]
Length = 310
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 183/308 (59%), Gaps = 11/308 (3%)
Query: 102 IEEFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP 157
+E+ D +P KS ++G+PNVGKSTL NQ+IGQK++I +NKPQTTR+RI + + P
Sbjct: 1 MEKRDSMKNPVTKSGFVAMIGRPNVGKSTLMNQLIGQKIAITSNKPQTTRNRIQTVYTDP 60
Query: 158 EY-QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEG 215
+ Q++ DTPGI + K + L M+ + + D I+ L++ D IL+E
Sbjct: 61 DRGQIVFLDTPGIHQAK-NKLGQYMVGVAERSMKDVDLILWLIEPDTRVGGGDRHILKEL 119
Query: 216 VGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWIL 275
+ ++P+ LV+NK D++K +I ++ Y D DE++PV A+ G G +D+ + I
Sbjct: 120 ---EQIQIPVFLVINKIDMVKKEKILAVIDTYRGEYDFDEILPVCARSGDGCKDLIESIF 176
Query: 276 TKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF 335
++LP GP +Y +D V++ P R EIIREK EVP+ V + K RP + +
Sbjct: 177 SRLPQGPMFYDEDTVTDQPMRQIAAEIIREKALYALDKEVPHGIAVAMDVMKRRPGRELW 236
Query: 336 -IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDE 394
I+ I+ E+ S K I+IGK G LK + + AR ++E L KV L + VKVKENWR +
Sbjct: 237 DIEATIICERESHKGIIIGKRGAMLKRIGSDARYELERMLSSKVNLRLFVKVKENWRDSD 296
Query: 395 GLLKHYGY 402
L++++GY
Sbjct: 297 FLIRNFGY 304
>gi|300173398|ref|YP_003772564.1| GTP-binding protein era [Leuconostoc gasicomitatum LMG 18811]
gi|299887777|emb|CBL91745.1| GTP-binding protein era [Leuconostoc gasicomitatum LMG 18811]
Length = 303
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 173/289 (59%), Gaps = 3/289 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPGI K
Sbjct: 12 TIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDSAQVVFIDTPGI-HKPQ 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ L M+K+ SA AD I +VDA R D+ + + + K+ I L++NK DL
Sbjct: 71 NSLGDFMVKSAFSALHGADAIWFVVDASMPRGRGDDFIINRLKEIKNT-AIYLLINKVDL 129
Query: 235 IKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ P ++ + Y E + EV P+SA+ G V ++ D ++ L GP Y+ D +++H
Sbjct: 130 LAPKDLLNVIASYQEDAPEWAEVFPISAREGDNVSELLDNVVAGLDEGPQYFDADQLTDH 189
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
PERF +GE+IREK+ R EVP++ V + K IQ IVVE+ +QK I+IG
Sbjct: 190 PERFVIGELIREKVLQLTRQEVPHSVAVVIDKISRESEEKIHIQASIVVERPTQKNIIIG 249
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K G +K + T AR DIE + KV+LE VKV+ WR+ L+ GY
Sbjct: 250 KQGTMIKEIGTRARKDIERLMGDKVFLETWVKVEPRWRERPQALQTLGY 298
>gi|21263583|sp|Q8YYD8.2|ERA_NOSS1 RecName: Full=GTPase Era
Length = 324
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 175/293 (59%), Gaps = 15/293 (5%)
Query: 116 VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIH 175
++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DTPG I K H
Sbjct: 37 IIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQLIFVDTPG-IHKPHH 95
Query: 176 MLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDKLPILLVLNK 231
L +++KN + A + D ++ +VD AC A +R I ++L K P++L +NK
Sbjct: 96 QLGEVLVKNAKLAIESVDVVLFVVDGAVACGAGDRFIADLLIH------SKTPVILGINK 149
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
D +P + K E Y++ + + SAK G + +++ ++ L GP YYP D+
Sbjct: 150 VDQ-QPPDSQKIDESYQQLASAYQWPTVKFSAKTGAELPQLQELLVEHLEHGPYYYPPDL 208
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
V++ PERF +GE+IRE+I + R EVP++ + + + PT + I VE++SQK
Sbjct: 209 VTDQPERFIMGELIREQILLLTREEVPHSVAIAIDLVEETPTITRVL-ATIHVERDSQKG 267
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
ILIGKGG LK + +AAR I+ + KVYLE+ VKV+ WR L GY
Sbjct: 268 ILIGKGGSMLKSIGSAAREQIQKLIAGKVYLELFVKVQPKWRHSRVRLAELGY 320
>gi|87125491|ref|ZP_01081336.1| GTP-binding protein ERA-like protein [Synechococcus sp. RS9917]
gi|86166791|gb|EAQ68053.1| GTP-binding protein ERA-like protein [Synechococcus sp. RS9917]
Length = 311
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 179/312 (57%), Gaps = 16/312 (5%)
Query: 104 EFDYASHPNHKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY 159
+ S H+S ++G+PNVGKSTL NQ++G K++I + QTTR+R+ I + PE
Sbjct: 2 DLTPGSQTPHRSGFVALIGRPNVGKSTLVNQLVGDKVAITSPVAQTTRNRLRAILTTPEA 61
Query: 160 QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH 219
Q+IL DTPG I K H+L ++++ RSA D +++L++ C+AP R D + + +
Sbjct: 62 QLILVDTPG-IHKPHHLLGERLVQSARSAIGEVDLVLLLLEGCEAPGRGDAFIIQLL--Q 118
Query: 220 KDKLPILLVLNKKDLIKPGEIAKK--LEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWILT 276
+ +LP+L+VLNK D + P E + L + E D V SA G G ++ I
Sbjct: 119 QQRLPVLVVLNKWDRV-PAERRPEADLAYRELLETPDWPVHHCSALSGAGCPELVQAIAA 177
Query: 277 KLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV-----VSYKTRPT 331
+LP GP YP D+VS+ PER + E+IRE++ +Q R E+P++ V + + K +
Sbjct: 178 RLPEGPQLYPADMVSDQPERLLMAELIREQVLLQTREEIPHSVAVQIDRVDEMPSKGKGK 237
Query: 332 AKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWR 391
+ + ++VE+ SQK ILIGKGG LK + ARL ++ + VYLE+ VKV +WR
Sbjct: 238 SCTAVLATVLVERKSQKGILIGKGGAMLKTIGQGARLQMQTLIDGPVYLELFVKVVPDWR 297
Query: 392 QDEGLLKHYGYG 403
L GYG
Sbjct: 298 SKPARLAELGYG 309
>gi|227890898|ref|ZP_04008703.1| GTP-binding protein Era [Lactobacillus salivarius ATCC 11741]
gi|227867307|gb|EEJ74728.1| GTP-binding protein Era [Lactobacillus salivarius ATCC 11741]
Length = 300
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 178/293 (60%), Gaps = 3/293 (1%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H ++LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 6 HSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGI 65
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
K L M+++ S D ++ +V+A + R D+ + E + + K PI LV+
Sbjct: 66 -HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLRNVKK--PIYLVI 122
Query: 230 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 289
NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP D
Sbjct: 123 NKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPADQ 182
Query: 290 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 349
+++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQK
Sbjct: 183 ITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQKG 242
Query: 350 ILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IGKGGK LK + AR DIE L KVYLE+ VKV+ NW+ + L+ GY
Sbjct: 243 IIIGKGGKMLKQIGVKARKDIELMLGDKVYLELWVKVQPNWKDRQVDLQALGY 295
>gi|318042122|ref|ZP_07974078.1| GTP-binding protein Era-like protein [Synechococcus sp. CB0101]
Length = 330
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 174/327 (53%), Gaps = 6/327 (1%)
Query: 78 DDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLS 137
D F S+ P MA +E+ + +++G+PNVGKSTL NQ++G+K++
Sbjct: 8 DSFPPFPDPSDLPAEAMAG--GFELGQSPEGYRSGFVALVGRPNVGKSTLLNQLVGEKVA 65
Query: 138 IVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVV 197
I + QTTR+R+ I + PE Q++L DTPGI K H+L +++ R A D +++
Sbjct: 66 ITSPIAQTTRNRLRAILTTPEAQLVLVDTPGI-HKPHHLLGERLVQTARGAIGEVDLVLL 124
Query: 198 LVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVI 257
LVD + R D + E + + P+ + LNK DL+ P + + Y + +
Sbjct: 125 LVDGSQPAGRGDGFIVELLS--HARAPVHVALNKHDLVDPAQAIELEASYRELVPDWPLH 182
Query: 258 PVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPY 317
PVSA G G E + + LP GP YP D VS+ PE+ + E+IRE++ R EVP+
Sbjct: 183 PVSALNGDGTEALVSALSAALPEGPHLYPPDAVSDQPEQLLLAELIREQVLQHTREEVPH 242
Query: 318 ACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKK 377
+ V + + + + VE+NSQK ILIGKGG+ L+ + + AR ++ +
Sbjct: 243 SVAVQ-IERIVDDGPRTAVLATVFVERNSQKGILIGKGGRMLREIGSGARQQMQKLINGP 301
Query: 378 VYLEIEVKVKENWRQDEGLLKHYGYGG 404
VYLE+ VKV NWR+ L GY G
Sbjct: 302 VYLELFVKVVPNWRRSASRLAELGYRG 328
>gi|157960866|ref|YP_001500900.1| GTP-binding protein Era [Shewanella pealeana ATCC 700345]
gi|157845866|gb|ABV86365.1| GTP-binding protein Era [Shewanella pealeana ATCC 700345]
Length = 330
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 170/291 (58%), Gaps = 4/291 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+GI + Q++ DTPG+ ++
Sbjct: 40 AIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGLHMEEK 99
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACK-APERIDEILEEGVGDHKDKLPILLVLNKKD 233
++ +M + S+ +V +VD P+ DE++ + D +L +NK D
Sbjct: 100 RAINRLMNRAAASSLAEVALVVFVVDGMNWTPD--DEMVLRKLQSRDDGRKTILAINKVD 157
Query: 234 LIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
IK E + LE K DE++P+SA G V+ I D + +P P Y+P+D V++
Sbjct: 158 NIKDKEALFPHLEELSKKFPFDEILPISATQGTNVQRILDMSVASVPESPHYFPEDYVTD 217
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILI 352
++F EI+REK+ +E+PY C V + +K I ++VE+ +QK ++I
Sbjct: 218 RSQKFMASEIVREKLMRFLGDELPYDCTVEIEQFKMMENGVYQINALVLVERETQKRMVI 277
Query: 353 GKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G G+ +K +++AAR+D+E KV+LE+ VKVK W DE L+ GYG
Sbjct: 278 GNKGERIKKISSAARVDMEVLFDNKVFLEMWVKVKSGWADDERALRSLGYG 328
>gi|260551499|ref|ZP_05825683.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. RUH2624]
gi|424054690|ref|ZP_17792214.1| GTP-binding protein Era [Acinetobacter nosocomialis Ab22222]
gi|425740715|ref|ZP_18858883.1| GTP-binding protein Era [Acinetobacter baumannii WC-487]
gi|445436624|ref|ZP_21440629.1| GTP-binding protein Era [Acinetobacter baumannii OIFC021]
gi|260405493|gb|EEW98986.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. RUH2624]
gi|407439439|gb|EKF45964.1| GTP-binding protein Era [Acinetobacter nosocomialis Ab22222]
gi|425494738|gb|EKU60937.1| GTP-binding protein Era [Acinetobacter baumannii WC-487]
gi|444754623|gb|ELW79236.1| GTP-binding protein Era [Acinetobacter baumannii OIFC021]
Length = 342
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++
Sbjct: 43 AIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEV 102
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ MM + SA + + ++ ++DA K + D +LE+ ++P++LV+NK D
Sbjct: 103 RAINKMMNRAAHSALRDVNLVLFVIDAYKWTQNDDLVLEKL---KNAEMPVILVINKADT 159
Query: 235 IK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+ EI ++ K + E++PVSA G +E + + I LP P Y D +++
Sbjct: 160 FEDKREILPLIQERTKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYSFDQITDR 219
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDFIQVEIVV 342
ERF EIIREKI Q E+PY V + S+KT A +I I V
Sbjct: 220 SERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKNGRLKPACTYIDATIFV 279
Query: 343 EKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
++ QK I+IG+ G LK + AR D+E ++K+ L + VKVK W DE LK GY
Sbjct: 280 DRPGQKAIVIGEKGAKLKTIGMDARKDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGY 339
Query: 403 G 403
Sbjct: 340 S 340
>gi|392541349|ref|ZP_10288486.1| GTP-binding protein Era [Pseudoalteromonas piscicida JCM 20779]
gi|409202182|ref|ZP_11230385.1| GTP-binding protein Era [Pseudoalteromonas flavipulchra JG1]
Length = 299
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 176/297 (59%), Gaps = 6/297 (2%)
Query: 109 SHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
+H +++G+PNVGKSTL N+++ QK+SI + KPQTTRHRI+GI + YQ + DTPG
Sbjct: 5 THCGMIAIVGRPNVGKSTLLNKLVEQKVSITSRKPQTTRHRIMGIHTEGNYQAVYVDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK-APERIDEILEEGVGDHKDKLPILL 227
+ ++ ++ +M + S+ + + ++ +V+ P+ DE++ V D PIL+
Sbjct: 65 LHIEEKRAINRLMNRAASSSIGDVELVIFVVEGTHWTPD--DEMVLAKVKDSGR--PILV 120
Query: 228 VLNKKDLIKPGEI-AKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
V+NK D +K ++ ++W + D ++P+SAK G V+ IR+ + +LP Y+P
Sbjct: 121 VMNKTDQVKDKDLLMPHIQWLSEQGDFIGIVPISAKQGKNVDMIREEVHKRLPACEFYFP 180
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
+D V++ RF EI+REK+ +E+PY+ V + +K + I I+VE+ S
Sbjct: 181 EDYVTDRSMRFMAAEIVREKLMRFMGDELPYSVTVEIEQFKWQDNGVWQINALILVERES 240
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
QK ++IG G+ LK++ AR D+E+ L KVYLE VKVK W DE L+ GYG
Sbjct: 241 QKRMVIGNKGEKLKVIGREARKDLENMLDNKVYLECWVKVKSGWADDERALRSLGYG 297
>gi|392309581|ref|ZP_10272115.1| GTP-binding protein Era [Pseudoalteromonas citrea NCIMB 1889]
Length = 299
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 176/296 (59%), Gaps = 4/296 (1%)
Query: 109 SHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
+H +++G+PNVGKSTL NQ++ QK+SI + KPQTTRHRI+GI + YQ + DTPG
Sbjct: 5 THCGMIAIVGRPNVGKSTLLNQIVEQKVSITSRKPQTTRHRIMGIHTEDNYQAVYVDTPG 64
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
+ ++ ++ +M + S+ + + I+ +++ + +L + +G + P+L+V
Sbjct: 65 LHIEEKRAINRLMNRAASSSIGDVELIIFVLEGTLWNADDEMVLTKVMGSGR---PVLVV 121
Query: 229 LNKKDLIKPGEIA-KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
+NK D +K E+ ++W + D +IPVSAK G ++ +++ + +LP Y+P+
Sbjct: 122 MNKVDQVKDHELVLPHMQWLSEQGDFAGIIPVSAKQGKNIDMVKEEVRKRLPESEFYFPE 181
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 347
D V++ RF E++REK+ +E+PY+ V + +K + I I+VE+ +Q
Sbjct: 182 DYVTDRSMRFLAAEVVREKLMRFMGDELPYSVTVEIEQFKWQDNGVWQINALILVERETQ 241
Query: 348 KIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K ++IG G+ LK++ AR D+E+ L KV+LE+ VKVK W DE L+ GYG
Sbjct: 242 KRMVIGNKGEKLKVIGREARKDLEEMLDNKVFLELWVKVKSGWADDERALRSLGYG 297
>gi|339627014|ref|YP_004718657.1| Era family GTP-binding protein [Sulfobacillus acidophilus TPY]
gi|379008602|ref|YP_005258053.1| GTP-binding protein Era-like-protein [Sulfobacillus acidophilus DSM
10332]
gi|339284803|gb|AEJ38914.1| Era family GTP-binding protein [Sulfobacillus acidophilus TPY]
gi|361054864|gb|AEW06381.1| GTP-binding protein Era-like-protein [Sulfobacillus acidophilus DSM
10332]
Length = 296
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 165/288 (57%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++G+K++I T KPQTTR+RI+GI P+ Q+IL DTPGI +
Sbjct: 9 ALVGRPNVGKSTLLNALLGRKVAIATPKPQTTRNRIVGIVHRPDGQLILLDTPGI-HRAQ 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
H L M + R AD I +VD + P D + ++P L+ NK DL
Sbjct: 68 HKLGQRMNQTARLTAREADLIWHIVDISRPPNEEDRWAASLC--RQSQIPTWLIGNKSDL 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ + A L Y++ +SA + G+ D+ + LP G YYP+D+V++
Sbjct: 126 V--ADAAAGLAPYQELMGYQAHWIISAAHELGLTDLVERTFEVLPEGVPYYPEDMVTDQS 183
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 354
E F+V E+IRE + R E+PY+ V V R +I+ I VE++ QK I+IG
Sbjct: 184 EDFYVSEVIREHVLELTREEIPYSVAVVVEERTLRRPDLTYIRATIYVERDGQKAIVIGD 243
Query: 355 GGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
GG+ LK + AR D+E++ + +V+L++ VKV+E WR +E L+ GY
Sbjct: 244 GGRMLKQIGERARQDLEEYYRHRVFLDLWVKVREKWRNEESWLRRLGY 291
>gi|345863878|ref|ZP_08816085.1| GTP-binding protein Era [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345124988|gb|EGW54861.1| GTP-binding protein Era [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 298
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 181/299 (60%), Gaps = 13/299 (4%)
Query: 109 SHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
+H + ++ G+PNVGKSTL N++IG KL+I ++K QTTRH ILGI + + Q+I DTPG
Sbjct: 6 NHCGYAAIAGRPNVGKSTLLNRIIGMKLAITSHKAQTTRHSILGIKTLEQGQVIYVDTPG 65
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
I E+ H ++ + + ++ ++ D ++ +V+A + ++L G+ + +P++L
Sbjct: 66 IHERADHAMNRYLNRTAKTVVVDVDVVIFVVEALRWTREDAKVL--GLLQERT-MPVILA 122
Query: 229 LNKKDLIKPGE-----IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 283
+NK D + E +A+ E Y D E+IP+SA GH V+ + +L +LPL
Sbjct: 123 VNKVDQVNQKEALLPFLAEMAERY----DFAEIIPISASNGHNVDALEKLVLERLPLADN 178
Query: 284 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 343
+YP++ +++ PE+FF E++RE+I +Y E+PYA V + ++ + I I VE
Sbjct: 179 FYPEEQLTDRPEKFFAAEMVREQITRRYAKELPYAVSVEIERFEEKGGIYR-INAVIWVE 237
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
K QK I+IGK G ALK++A+ AR +E F KVYLE+ VKVK++W DE L GY
Sbjct: 238 KPGQKAIIIGKQGGALKIVASQARKAMEQFFGCKVYLEVWVKVKKSWSDDEASLARLGY 296
>gi|225868116|ref|YP_002744064.1| GTP-binding protein Era homolog [Streptococcus equi subsp.
zooepidemicus]
gi|259646273|sp|C0MCD8.1|ERA_STRS7 RecName: Full=GTPase Era
gi|225701392|emb|CAW98467.1| GTP-binding protein Era homolog [Streptococcus equi subsp.
zooepidemicus]
Length = 298
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K Q+TR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQSTRNKIMGIYTTETEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + ++P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAARIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D E++P+SA G+ VE + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLVQLLKDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ + EVP++ V V S K T K I+V I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMVREKVLHLTQQEVPHSVAVVVDSMKRDEVTDKVHIRVTIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGAMLKKIGKLARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|419776578|ref|ZP_14302500.1| GTP-binding protein Era [Streptococcus intermedius SK54]
gi|383845989|gb|EID83389.1| GTP-binding protein Era [Streptococcus intermedius SK54]
Length = 299
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 179/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + R D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVETVLFMVPADEKRGRGDDMIMERL--KAAKIPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + + E++P+SA G+ V + + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRTQMEFKEIVPISALQGNNVSRLMELLKENLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKILKLTEQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|339301091|ref|ZP_08650213.1| GTP-binding protein Era [Streptococcus agalactiae ATCC 13813]
gi|319745497|gb|EFV97801.1| GTP-binding protein Era [Streptococcus agalactiae ATCC 13813]
Length = 314
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 179/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 24 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 83
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 84 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 140
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D +++HP
Sbjct: 141 VHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQITDHP 200
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 201 ERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQKGIIIG 260
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 261 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 310
>gi|333897328|ref|YP_004471202.1| GTP-binding protein Era [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112593|gb|AEF17530.1| GTP-binding protein Era-like-protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 299
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 183/297 (61%), Gaps = 20/297 (6%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+ NVGKSTL N ++ +K++I ++KPQTTR+ I GI +G +YQ+I DTPGI + K
Sbjct: 9 ALIGRTNVGKSTLLNALLNEKVAITSDKPQTTRNTIQGILTGEDYQVIFIDTPGIHKPK- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK--DKL-----PILL 227
H L M+++V+ D I+ +V+ P+ +E G GD D L P++L
Sbjct: 68 HKLSEFMIESVKKTLAEVDLIIYMVE----PD-----VEVGPGDKYIIDHLINIETPVIL 118
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 287
V+NK D + + ++ +++ + +++P+SA ++ ++ I++ +P GP Y+P
Sbjct: 119 VINKIDTVSHETVDMSIQIFKQLYNFKDILPISALKNMNIDLLKHTIVSYIPEGPQYFPS 178
Query: 288 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 345
D +++ PE+F V EIIREKI +EVP+ V V S K R KD + +E I EK
Sbjct: 179 DYITDRPEKFLVSEIIREKILNYLEDEVPHGVYVEVDSMKARED-KDILDIEAFIYCEKE 237
Query: 346 SQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
S K I+IGK G+ L+ + ++AR+++E +K+YL++ VKV++ WR + +L+++GY
Sbjct: 238 SHKAIIIGKNGQMLRRIGSSARIELESLFGQKIYLDLWVKVRKGWRDNVSILRNFGY 294
>gi|148652187|ref|YP_001279280.1| GTP-binding protein Era [Psychrobacter sp. PRwf-1]
gi|148571271|gb|ABQ93330.1| GTP-binding protein Era [Psychrobacter sp. PRwf-1]
Length = 339
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 177/321 (55%), Gaps = 26/321 (8%)
Query: 95 ASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGIC 154
A P+DY + +++G+PNVGKSTL N M+GQKLSI + KPQTTRHRI GI
Sbjct: 32 ALPEDY---------RAGYVAIVGRPNVGKSTLMNHMLGQKLSITSRKPQTTRHRIHGIL 82
Query: 155 SGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILE- 213
S + Q + DTPGI ++ +++ M K SA ++ D ++ +VD + E D++L
Sbjct: 83 SHEDMQAVFVDTPGIHSNEVRLINERMNKAAFSALVDVDLVLFVVDGDQWRE--DDLLTL 140
Query: 214 EGVGDHKDKLPILLVLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRD 272
E +G+ P++LV+NK D IK G I +E Y + D +++PVSA +E ++
Sbjct: 141 EKIGET--DTPVVLVINKADTIKDKGSILPLIETYHENFDFADIVPVSALKNQNLERLQQ 198
Query: 273 WILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA 332
I + LP G Y + +++ ERF EIIREKI Q +EVPY V + +K P
Sbjct: 199 VIRSHLPQGAPIYDTEQITDRSERFLASEIIREKIMRQSGDEVPYDLTVQIDEFKDEPAH 258
Query: 333 KD-----------FIQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLE 381
D FI I VE+N QK I+IG G +K + TAAR D+E ++K+ L
Sbjct: 259 IDPKTGRKRKAVTFIDATIFVERNGQKAIIIGDKGSRIKQVGTAAREDMEALFERKIMLN 318
Query: 382 IEVKVKENWRQDEGLLKHYGY 402
+ VKVK+ W D L GY
Sbjct: 319 LWVKVKQGWSDDARALSSLGY 339
>gi|315640637|ref|ZP_07895743.1| GTP-binding protein Era [Enterococcus italicus DSM 15952]
gi|315483665|gb|EFU74155.1| GTP-binding protein Era [Enterococcus italicus DSM 15952]
Length = 298
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS ++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + + Q++ DTPG
Sbjct: 4 HKSGFVALVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTKDAQIVFIDTPG 63
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 221
I + K + D M+++ SA D I+ ++ A ++ G GD K
Sbjct: 64 IHKPKSRLGD-FMVESAFSALNEVDVILFMI---SADQK------RGKGDDLIIERLKKQ 113
Query: 222 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 281
+P+ LV+NK D + P + + + Y + D EV+P+SA G+ + I +L G
Sbjct: 114 SVPVFLVVNKLDKVHPDALLEVIADYSQQMDFAEVVPISATEGNNFPTLMATIEKELEEG 173
Query: 282 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 341
P Y+P+D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+
Sbjct: 174 PQYFPEDQVTDHPEYFIVSELIREKVLQFTRDEVPHSVAVVVDSMKKNENEKIAIQATII 233
Query: 342 VEKNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
VE++SQK I+IGKGGK LKL+ T ARLDIE L KV+LE+ VKV+++WR+ E L YG
Sbjct: 234 VERDSQKGIIIGKGGKMLKLIGTKARLDIEHLLGNKVFLELWVKVQKDWREKERYLTDYG 293
Query: 402 Y 402
Y
Sbjct: 294 Y 294
>gi|227890109|ref|ZP_04007914.1| GTP-binding protein Era [Lactobacillus johnsonii ATCC 33200]
gi|268319372|ref|YP_003293028.1| GTP-binding protein [Lactobacillus johnsonii FI9785]
gi|227849553|gb|EEJ59639.1| GTP-binding protein Era [Lactobacillus johnsonii ATCC 33200]
gi|262397747|emb|CAX66761.1| GTP-binding protein [Lactobacillus johnsonii FI9785]
Length = 303
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 174/291 (59%), Gaps = 10/291 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++ DTPGI + K
Sbjct: 14 ALIGRPNVGKSTLLNYLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIVFIDTPGIHKPK- 72
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLPILLVLNK 231
+ LD M K+ SA D ++ +V+ A K + I E+L+ K K P+ LV+NK
Sbjct: 73 NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------KIKKPVFLVINK 126
Query: 232 KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVS 291
D + P E+ ++ Y+ D E++P+SA G+ V ++ I LP GP +Y D ++
Sbjct: 127 IDKVHPDELLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLPEGPQFYDADQLT 186
Query: 292 EHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIIL 351
+ PE F V E+IRE++ EVP+A V V + K ++ I VE+ QK I+
Sbjct: 187 DRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQVEATIYVERPGQKGII 246
Query: 352 IGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
IGK G+ LK + AAR +IE L +KV L + VKV++NWR D LK GY
Sbjct: 247 IGKKGQMLKQIGIAARQEIEALLGEKVNLRLWVKVQKNWRSDPVFLKSIGY 297
>gi|58040242|ref|YP_192206.1| GTP-binding protein Era [Gluconobacter oxydans 621H]
gi|58002656|gb|AAW61550.1| GTP-binding protein [Gluconobacter oxydans 621H]
Length = 295
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 5/288 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G PN GKSTL N++ G KLSIV+ K QTTR R LGI Q+IL D PGI + +
Sbjct: 9 ALVGAPNAGKSTLLNRIAGAKLSIVSPKAQTTRFRTLGIVMQDNAQIILVDLPGIFKPR- 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLVLNKKD 233
LD M+ S +AD ++LVDA E + EI+ + + + K++ I LVLNK D
Sbjct: 68 RRLDRAMVNAAWSGSQDADLTLLLVDAKSGLREDVREIIAK-LAESKNR--IWLVLNKTD 124
Query: 234 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
L++ GE+ + +V+ V +SA+ G GV D+ + +LP GP YP+D +++
Sbjct: 125 LVERGELLPLTQEISGLINVEHVFMLSARSGEGVSDLMARLAAELPEGPFLYPEDDLTDL 184
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
P+R E++RE+IFMQ E+PY V S+K RP I+V I V + K ILIG
Sbjct: 185 PDRLLAAELVREQIFMQTHEEIPYQATVETESFKERPDGSVRIEVTIYVSRPGHKAILIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYG 401
+GG +K L AR+++++ L +K +L + VK + W +++ L+ G
Sbjct: 245 EGGHKIKSLGARARMELQELLDRKCHLFLNVKERAGWDEEKARLRAIG 292
>gi|22537642|ref|NP_688493.1| GTP-binding protein Era [Streptococcus agalactiae 2603V/R]
gi|25011601|ref|NP_735996.1| GTP-binding protein Era [Streptococcus agalactiae NEM316]
gi|76787745|ref|YP_330131.1| GTP-binding protein Era [Streptococcus agalactiae A909]
gi|77405197|ref|ZP_00782295.1| GTP-binding protein Era [Streptococcus agalactiae H36B]
gi|77413995|ref|ZP_00790168.1| GTP-binding protein Era [Streptococcus agalactiae 515]
gi|417005903|ref|ZP_11944473.1| GTP-binding protein Era [Streptococcus agalactiae FSL S3-026]
gi|421147192|ref|ZP_15606883.1| GTPase Era [Streptococcus agalactiae GB00112]
gi|81453614|sp|Q8DYI1.1|ERA_STRA5 RecName: Full=GTPase Era
gi|81744499|sp|Q8E443.1|ERA_STRA3 RecName: Full=GTPase Era
gi|123601489|sp|Q3K022.1|ERA_STRA1 RecName: Full=GTPase Era
gi|22534528|gb|AAN00366.1|AE014260_22 GTP-binding protein Era [Streptococcus agalactiae 2603V/R]
gi|24413141|emb|CAD47219.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562802|gb|ABA45386.1| GTP-binding protein Era [Streptococcus agalactiae A909]
gi|77159975|gb|EAO71113.1| GTP-binding protein Era [Streptococcus agalactiae 515]
gi|77176199|gb|EAO78970.1| GTP-binding protein Era [Streptococcus agalactiae H36B]
gi|341576084|gb|EGS26495.1| GTP-binding protein Era [Streptococcus agalactiae FSL S3-026]
gi|401686137|gb|EJS82126.1| GTPase Era [Streptococcus agalactiae GB00112]
Length = 299
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 179/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|386362248|ref|YP_006071579.1| GTP-binding protein Era [Streptococcus pyogenes Alab49]
gi|350276657|gb|AEQ24025.1| GTP-binding protein Era [Streptococcus pyogenes Alab49]
Length = 298
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 179/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEVVPISALEGNNVPTLIKLLTDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + EVP++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|366162625|ref|ZP_09462380.1| GTPase Era [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 178/292 (60%), Gaps = 9/292 (3%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
S++G+PNVGKSTL N + G+K++I+++KPQTTR+ I + +G E+Q++ DTPGI + K
Sbjct: 9 SIVGRPNVGKSTLLNNITGEKIAIMSDKPQTTRNTIKAVITGDEHQIVFIDTPGIHKPKN 68
Query: 175 HMLDSMMMKNVRSAGIN-ADCIVVLVDACK-APERIDEILEEGVGDHKDKLPILLVLNKK 232
+ D M+ N+ +N D ++ LV+A P D + E + + K K + LV+NK
Sbjct: 69 KLGDFMV--NIAVETLNEVDVVLFLVEAQNLKPGPGDLFIVEQLKNVKSK--VFLVINKI 124
Query: 233 DLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSE 292
DLI ++ + Y+ + + +IP+SA + + IL LP GP Y+P+D++++
Sbjct: 125 DLIDKSQLLPLISAYKDLMNFEALIPISALKDEKQDPLISEILKVLPEGPKYFPEDMMTD 184
Query: 293 HPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEIVVEKNSQKII 350
PE+ E+IREKI +EVP+ V V+S+K R KD IQ I EK++ K I
Sbjct: 185 QPEKLIAAELIREKILHLVSDEVPHGVGVEVISFKQR-DDKDIINIQANIYCEKDTHKGI 243
Query: 351 LIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
LIGKGG LK + + +R +IE+ L +V+LE+ VKVK +WR E +LK GY
Sbjct: 244 LIGKGGSMLKRIGSLSRTEIENLLGIQVFLELWVKVKPDWRNSEQMLKVLGY 295
>gi|317132159|ref|YP_004091473.1| GTP-binding protein Era [Ethanoligenens harbinense YUAN-3]
gi|315470138|gb|ADU26742.1| GTP-binding protein Era [Ethanoligenens harbinense YUAN-3]
Length = 296
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 173/296 (58%), Gaps = 8/296 (2%)
Query: 110 HPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 169
H +++G+PNVGKSTL N ++G+K++IV+ KPQTTR++I G+ + + Q+I DTPG
Sbjct: 5 HSGFVAIIGRPNVGKSTLLNAILGEKIAIVSPKPQTTRNKITGVYTKDDTQLIFLDTPGW 64
Query: 170 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 229
+ K L + M K+V + + D ++ +++ +AP + E +G ++P+LLV+
Sbjct: 65 HQPKTK-LGNYMAKSVDNTLTDVDAVLFVIEPREAPRPAE---TELLGKLGKQVPVLLVI 120
Query: 230 NKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
NK D++ + + + K D V+P+SA+ GV+ + +++ +P GP YYP D
Sbjct: 121 NKIDILADKSALMGVIAHWSKLRDFTAVVPISAEKNDGVDALLAELISLMPEGPQYYPDD 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV--EKNS 346
+V+ PER V EIIREK+ E+P+ V++ R T I ++ V+ E+ S
Sbjct: 181 MVTAEPERLVVAEIIREKLLTLLSAEIPHGIAVSIERMHERETG-SLIDIDAVIYCERES 239
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I++GKGG LK + AR DIE L V L + VKVKENWR EG+L+ GY
Sbjct: 240 HTGIIVGKGGAMLKKVGIKARADIESLLGCHVSLHLWVKVKENWRNREGILRTLGY 295
>gi|336123317|ref|YP_004565365.1| GTP-binding protein era [Vibrio anguillarum 775]
gi|365540222|ref|ZP_09365397.1| GTPase Era [Vibrio ordalii ATCC 33509]
gi|335341040|gb|AEH32323.1| GTP-binding protein era [Vibrio anguillarum 775]
Length = 324
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 184/330 (55%), Gaps = 17/330 (5%)
Query: 76 EFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSVLGKPNVGKSTLANQMIGQK 135
EFD + F S + N A+P+ E H +++G+PNVGKSTL N ++GQK
Sbjct: 5 EFDLDAYFAS---NTNSNEATPESGE-------QHCGFIAIVGRPNVGKSTLLNNLLGQK 54
Query: 136 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 195
+SI + KPQTTRHRI+G+ + YQ I DTPG+ ++ ++ +M + S+ + + +
Sbjct: 55 ISITSRKPQTTRHRIMGVDTEGPYQAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNLV 114
Query: 196 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGE--IAKKLEWYEKFTDV 253
+ LVD + + +L + P++L +NK D +K + LE +K V
Sbjct: 115 LFLVDGTQWTADDEMVLNKL---RNANFPVVLCVNKVDNVKDRNDVMMHMLELSKKMEFV 171
Query: 254 DEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRN 313
D V+P++AK+G V+ +R + LP ++P++ V++ +RF EI+REK+
Sbjct: 172 D-VVPIAAKHGKNVDVLRKHVREHLPQATHHFPEEYVTDRSQRFMASEIVREKLMRFTGE 230
Query: 314 EVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKIILIGKGGKALKLLATAARLDIED 372
E+PY+ V + + P F I I+VE++ QK ++IGKGG+ +K + ARLD+E+
Sbjct: 231 ELPYSVTVEIERFDYNPETDGFHINALILVERSGQKKMVIGKGGEKIKTIGREARLDMEE 290
Query: 373 FLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+KVYLE VKVK W DE L+ GY
Sbjct: 291 LFGRKVYLETWVKVKSGWADDERALRSLGY 320
>gi|376001345|ref|ZP_09779215.1| membrane-associated, 16S rRNA-binding GTPase [Arthrospira sp. PCC
8005]
gi|375330174|emb|CCE14968.1| membrane-associated, 16S rRNA-binding GTPase [Arthrospira sp. PCC
8005]
Length = 310
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 176/299 (58%), Gaps = 25/299 (8%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++G+PNVGKSTL N+++GQK++I + QTTR+R+ GI + Q+I DTPGI K
Sbjct: 22 GIIGRPNVGKSTLMNKLVGQKIAITSPIAQTTRNRLRGILTTESAQIIFVDTPGI-HKPH 80
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDKLPILL 227
H L +++KN + A + D +V +VD+ + G GD K+P++L
Sbjct: 81 HQLGKVLVKNAKLAIASVDVLVFVVDSS---------VMSGGGDRYIVDLLTHTKVPVIL 131
Query: 228 VLNKKDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPLGPAYY 285
LNK DL +P + + Y++F + ++ ++ SA G G+E +++ ++ L GP YY
Sbjct: 132 GLNKWDL-QPDQYEAIDQSYQQFAEANQWQMVKFSASTGAGLETLQNLLINSLDPGPYYY 190
Query: 286 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV--VSYKTRPTAKDFIQVEIVVE 343
P D+V++ PERF +GE+IRE+I + R EVP++ + + V + T I I VE
Sbjct: 191 PPDLVTDQPERFIMGELIREQILLHTREEVPHSVAIAIDKVEEDVKITR---ILATIHVE 247
Query: 344 KNSQKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
+ SQK ILIGKGG+ LK + +AAR I+ + KVYLE+ V+VK WRQ L GY
Sbjct: 248 RLSQKGILIGKGGQMLKTIGSAARQQIQKLVDGKVYLELFVRVKPKWRQSRNQLAELGY 306
>gi|109899453|ref|YP_662708.1| GTP-binding protein Era [Pseudoalteromonas atlantica T6c]
gi|109701734|gb|ABG41654.1| GTP-binding protein Era [Pseudoalteromonas atlantica T6c]
Length = 300
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 167/290 (57%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK+SI + KPQTTRHRI+GI + Q I DTPG+ ++
Sbjct: 11 AIVGRPNVGKSTLLNALLGQKVSITSRKPQTTRHRIMGIDTHENRQAIYVDTPGLHIEEK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ M + S+ + ++ +V+ K E +L + + + +P L++NK D
Sbjct: 71 RAINRFMNRAASSSISDVGLVLFVVEGTKWNEDDQMVLTKIM---QSNVPCWLIVNKSDN 127
Query: 235 IKPGEIA-KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K EI L+W + D+++P+SA+ G V ++RD + LP Y+P D +++
Sbjct: 128 VKDKEILLPHLKWLGEQHAFDKIMPISARNGKNVNELRDMVNETLPESEFYFPDDYITDR 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ +E+PY+ V + + I I+VE++SQK ++IG
Sbjct: 188 SSRFMAAEIIREKLMRFTGDELPYSITVEIEQFMMAENGVYRINGLILVERDSQKSMVIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
KGG+ LK + AR D+E KV+LE+ VKVK W DE L+ GYG
Sbjct: 248 KGGQRLKTIGAEARKDMESLFDTKVFLELWVKVKSGWADDERALRSLGYG 297
>gi|410627472|ref|ZP_11338211.1| GTP-binding protein Era [Glaciecola mesophila KMM 241]
gi|410152964|dbj|GAC24980.1| GTP-binding protein Era [Glaciecola mesophila KMM 241]
Length = 300
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 167/290 (57%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N ++GQK+SI + KPQTTRHRI+GI + Q I DTPG+ ++
Sbjct: 11 AIVGRPNVGKSTLLNALLGQKVSITSRKPQTTRHRIMGIDTHENRQAIYVDTPGLHIEEK 70
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ M + S+ + ++ +V+ K E +L + + + +P L++NK D
Sbjct: 71 RAINRFMNRAASSSISDVGLVLFVVEGTKWNEDDQMVLTKIM---QSNVPCWLIVNKSDN 127
Query: 235 IKPGEIA-KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
+K EI L+W + D+++P+SA+ G V ++RD + LP Y+P D +++
Sbjct: 128 VKDKEILLPHLKWLGEQHAFDKIMPISARNGKNVNELRDMVNETLPESEFYFPDDYITDR 187
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
RF EIIREK+ +E+PY+ V + + I I+VE++SQK ++IG
Sbjct: 188 SSRFMAAEIIREKLMRFTGDELPYSITVEIEQFMMAENGVYRINGLILVERDSQKSMVIG 247
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
KGG+ LK + AR D+E KV+LE+ VKVK W DE L+ GYG
Sbjct: 248 KGGQRLKTIGAEARKDMESLFDTKVFLELWVKVKSGWADDERALRSLGYG 297
>gi|329117153|ref|ZP_08245870.1| ribosome biogenesis GTPase Era [Streptococcus parauberis NCFD 2020]
gi|326907558|gb|EGE54472.1| ribosome biogenesis GTPase Era [Streptococcus parauberis NCFD 2020]
Length = 299
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 9 AILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 68
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 69 ALGD-FMVESAYSTLREVETVIFMVPADEKRGKGDDMIIERL--KTAKIPVILVINKIDK 125
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ V + + + L G Y+P+D +++HP
Sbjct: 126 VHPDQLLEQIDDFRNQMDFKEVVPISALQGNNVNPLMEILKDNLEEGFQYFPEDQITDHP 185
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + E+P++ V + S K T K I+ I+VE++SQK I+IG
Sbjct: 186 ERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDEETDKVHIRATIMVERDSQKGIIIG 245
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 246 KQGAMLKKIGKMARRDIEVMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 295
>gi|212558006|gb|ACJ30460.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Shewanella piezotolerans WP3]
Length = 330
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 169/290 (58%), Gaps = 2/290 (0%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
+++G+PNVGKSTL N+++GQK+SI + KPQTTRHRI+GI + Q++ DTPG+ ++
Sbjct: 40 AIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGLHMEEK 99
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
++ +M + S+ +V +VD DE++ + D +L +NK D
Sbjct: 100 RAINRLMNRAAASSLAEVSLVVFVVDGMNWTAD-DEMVLRKLQSRNDGRKTVLAINKVDN 158
Query: 235 IKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 293
IK E + LE K + DE++P+SA G V+ I D + +P P ++P+D V++
Sbjct: 159 IKDKEALFPHLEELSKKFEFDEILPISATQGTNVQRILDMSVESVPESPHFFPEDYVTDR 218
Query: 294 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 353
++F EI+REK+ +E+PY C V + +K I ++VE+ +QK ++IG
Sbjct: 219 SQKFMASEIVREKLMRFLGDELPYDCTVEIEQFKMMENGVYQINALVLVERETQKRMVIG 278
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
G+ +K +++AAR+D+E KV+LE+ VKVK W DE L+ GYG
Sbjct: 279 NKGERIKKISSAARVDMEVLFDNKVFLEMWVKVKSGWADDERALRSLGYG 328
>gi|292490850|ref|YP_003526289.1| GTP-binding protein Era [Nitrosococcus halophilus Nc4]
gi|291579445|gb|ADE13902.1| GTP-binding protein Era [Nitrosococcus halophilus Nc4]
Length = 303
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 171/296 (57%), Gaps = 5/296 (1%)
Query: 108 ASHPNHKSVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 167
+ + +++G+PNVGKS+L N ++GQK+SI +PQTTRHRILGI + P+ Q I DTP
Sbjct: 9 GARCGYVAIIGRPNVGKSSLLNCILGQKISITARRPQTTRHRILGIKTSPDAQAIYVDTP 68
Query: 168 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 227
G+ +K+ +++ + + SA + D I+ +V+A + E + IL+ + +PI+L
Sbjct: 69 GLQDKERRLMNRYLNRAADSAIEDVDLILFIVEAYRFTEEDERILQR---LRRRGVPIVL 125
Query: 228 VLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 286
VLNK D + + + +E K + ++PVSA G V + + LP GP YP
Sbjct: 126 VLNKVDRVADKKTLLPIMEQLSKKMEFAAIVPVSAWKGDNVAVLEKKVAGLLPEGPMIYP 185
Query: 287 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 346
+D V++ ERF E+IREK+ E+PYA V V S + I I VE+
Sbjct: 186 EDQVTDRSERFLAAELIREKLTRHLGQELPYALTVFVESIEEEKNLYR-IAATIYVERPG 244
Query: 347 QKIILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
QK I+IGK G+ LK + ARLD+E KVYLE+ VKV+E W +E LL+ +GY
Sbjct: 245 QKAIVIGKKGEGLKRIGYEARLDMERMFGGKVYLELWVKVREGWSDNEHLLRSWGY 300
>gi|189037675|sp|Q1JI67.1|ERA_STRPD RecName: Full=GTPase Era
gi|94543408|gb|ABF33456.1| GTP-binding protein era [Streptococcus pyogenes MGAS10270]
Length = 298
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 179/290 (61%), Gaps = 4/290 (1%)
Query: 115 SVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKI 174
++LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI + K
Sbjct: 8 AILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKT 67
Query: 175 HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDL 234
+ D M+++ S + ++ +V A + + D+++ E + K+P++LV+NK D
Sbjct: 68 ALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVINKIDK 124
Query: 235 IKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHP 294
+ P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D +++HP
Sbjct: 125 VHPDQLLEQIDDFRSQMDFKEVVPISALEGNNVPTLIKLLTDNLEEGFQYFPEDQITDHP 184
Query: 295 ERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQKIILIG 353
ERF V E+IREK+ + EVP++ V V S K T K I+ I+VE++SQK I+IG
Sbjct: 185 ERFLVSEMIREKVLHFTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQKGIIIG 244
Query: 354 KGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGYG 403
K G LK + AR DIE L KVYLE VKVK+NWR + L +GY
Sbjct: 245 KQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYN 294
>gi|334128857|ref|ZP_08502736.1| GTP-binding protein Era [Centipeda periodontii DSM 2778]
gi|333386269|gb|EGK57487.1| GTP-binding protein Era [Centipeda periodontii DSM 2778]
Length = 298
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 173/294 (58%), Gaps = 7/294 (2%)
Query: 113 HKS----VLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 168
HKS V+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTPG
Sbjct: 4 HKSGFAAVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTEEDAQIIFLDTPG 63
Query: 169 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 228
+ + K H L M K A D ++ +VD + P ++ + + + + + P+LL
Sbjct: 64 VHKPK-HKLGDYMAKATEGALHGVDVVIFVVDVTEKPGAGEQYILKQLANVR--APVLLA 120
Query: 229 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 288
+NK D I ++ L Y K D ++P+SA+ +E + I LP GP YYP D
Sbjct: 121 VNKVDCIPREKVLPILANYAKVYDFAGIVPISARAEENLEGLLAEIKKYLPEGPQYYPDD 180
Query: 289 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 348
+V++ PER V E++REK+ R+E+P+A V++ TRP +I+ I VE+ SQK
Sbjct: 181 MVTDQPERLIVAELVREKVLELTRDEIPHAVAVDIEEMTTRPKGDVYIRAVIYVERESQK 240
Query: 349 IILIGKGGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKHYGY 402
I+IG G L+ + AR D+E L KVYL++ VK +++WR L+ +G+
Sbjct: 241 GIVIGARGALLRTIGQRARADVETLLGTKVYLDLWVKTRKDWRNRATALREFGF 294
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,682,523,554
Number of Sequences: 23463169
Number of extensions: 283078225
Number of successful extensions: 937155
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8835
Number of HSP's successfully gapped in prelim test: 11305
Number of HSP's that attempted gapping in prelim test: 909615
Number of HSP's gapped (non-prelim): 25246
length of query: 409
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 264
effective length of database: 8,957,035,862
effective search space: 2364657467568
effective search space used: 2364657467568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)