BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015298
(409 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/380 (63%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 26 PEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFG 85
P MK+ DK DG+ T +V T G +P Q +SY +++G GSFG
Sbjct: 20 PSAFGSMKVSRDK-------DGSKVTT---VVATPGQGPDRP-QEVSYTDTKVIGNGSFG 68
Query: 86 VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYL 144
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YL
Sbjct: 69 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128
Query: 145 NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNL 204
NLVL+YVPETV+RV +H+++ Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNL
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 187
Query: 205 LVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVV 264
L++P T +KLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCV+
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 247
Query: 265 AELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK 324
AEL+LG+P+FPGDSGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F
Sbjct: 248 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 307
Query: 325 RMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHEL 384
R PPEA+ L SRLL+Y+P R T L+A H FFDELRDPN +LP+GR P LFNF + EL
Sbjct: 308 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL 367
Query: 385 KSVPVEILVKLIPEHARKQC 404
S P + LIP HAR Q
Sbjct: 368 SSNP-PLATILIPPHARIQA 386
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/380 (63%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 26 PEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFG 85
P MK+ DK DG+ T +V T G +P Q +SY +++G GSFG
Sbjct: 14 PSAFGSMKVSRDK-------DGSKVTT---VVATPGQGPDRP-QEVSYTDTKVIGNGSFG 62
Query: 86 VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYL 144
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YL
Sbjct: 63 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 122
Query: 145 NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNL 204
NLVL+YVPETV+RV +H+++ Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNL
Sbjct: 123 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 181
Query: 205 LVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVV 264
L++P T +KLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCV+
Sbjct: 182 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 241
Query: 265 AELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK 324
AEL+LG+P+FPGDSGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F
Sbjct: 242 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 301
Query: 325 RMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHEL 384
R PPEA+ L SRLL+Y+P R T L+A H FFDELRDPN +LP+GR P LFNF + EL
Sbjct: 302 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL 361
Query: 385 KSVPVEILVKLIPEHARKQC 404
S P + LIP HAR Q
Sbjct: 362 SSNP-PLATILIPPHARIQA 380
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/380 (63%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 26 PEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFG 85
P MK+ DK DG+ T +V T G +P Q +SY +++G GSFG
Sbjct: 24 PSAFGSMKVSRDK-------DGSKVTT---VVATPGQGPDRP-QEVSYTDTKVIGNGSFG 72
Query: 86 VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYL 144
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YL
Sbjct: 73 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 132
Query: 145 NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNL 204
NLVL+YVPETV+RV +H+++ Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNL
Sbjct: 133 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 191
Query: 205 LVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVV 264
L++P T +KLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCV+
Sbjct: 192 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 251
Query: 265 AELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK 324
AEL+LG+P+FPGDSGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F
Sbjct: 252 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 311
Query: 325 RMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHEL 384
R PPEA+ L SRLL+Y+P R T L+A H FFDELRDPN +LP+GR P LFNF + EL
Sbjct: 312 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL 371
Query: 385 KSVPVEILVKLIPEHARKQC 404
S P + LIP HAR Q
Sbjct: 372 SSNP-PLATILIPPHARIQA 390
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/380 (63%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 26 PEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFG 85
P MK+ DK DG+ T +V T G +P Q +SY +++G GSFG
Sbjct: 22 PSAFGSMKVSRDK-------DGSKVTT---VVATPGQGPDRP-QEVSYTDTKVIGNGSFG 70
Query: 86 VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYL 144
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YL
Sbjct: 71 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 130
Query: 145 NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNL 204
NLVL+YVPETV+RV +H+++ Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNL
Sbjct: 131 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 189
Query: 205 LVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVV 264
L++P T +KLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCV+
Sbjct: 190 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 249
Query: 265 AELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK 324
AEL+LG+P+FPGDSGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F
Sbjct: 250 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 309
Query: 325 RMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHEL 384
R PPEA+ L SRLL+Y+P R T L+A H FFDELRDPN +LP+GR P LFNF + EL
Sbjct: 310 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL 369
Query: 385 KSVPVEILVKLIPEHARKQC 404
S P + LIP HAR Q
Sbjct: 370 SSNP-PLATILIPPHARIQA 388
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/380 (63%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 26 PEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFG 85
P MK+ DK DG+ T +V T G +P Q +SY +++G GSFG
Sbjct: 65 PSAFGSMKVSRDK-------DGSKVTT---VVATPGQGPDRP-QEVSYTDTKVIGNGSFG 113
Query: 86 VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYL 144
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YL
Sbjct: 114 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 173
Query: 145 NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNL 204
NLVL+YVPETV+RV +H+++ Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNL
Sbjct: 174 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 232
Query: 205 LVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVV 264
L++P T +KLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCV+
Sbjct: 233 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 292
Query: 265 AELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK 324
AEL+LG+P+FPGDSGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F
Sbjct: 293 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 352
Query: 325 RMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHEL 384
R PPEA+ L SRLL+Y+P R T L+A H FFDELRDPN +LP+GR P LFNF + EL
Sbjct: 353 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL 412
Query: 385 KSVPVEILVKLIPEHARKQC 404
S P + LIP HAR Q
Sbjct: 413 SSNP-PLATILIPPHARIQA 431
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/380 (63%), Positives = 296/380 (77%), Gaps = 14/380 (3%)
Query: 26 PEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFG 85
P MK+ DK DG+ T +V T G +P Q +SY +++G GSFG
Sbjct: 20 PSAFGSMKVSRDK-------DGSKVTT---VVATPGQGPDRP-QEVSYTDTKVIGNGSFG 68
Query: 86 VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYL 144
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YL
Sbjct: 69 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128
Query: 145 NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNL 204
NLVL+YVPETV+RV +H+++ Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNL
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 187
Query: 205 LVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVV 264
L++P T +KLCDFGSAK LV+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCV+
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 247
Query: 265 AELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK 324
AEL+LG+P+FPGDSGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F
Sbjct: 248 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 307
Query: 325 RMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHEL 384
R PPEA+ L SRLL+Y+P R T L+A H FFDELRDPN +LP+GR P LFNF + EL
Sbjct: 308 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL 367
Query: 385 KSVPVEILVKLIPEHARKQC 404
S P + LIP HAR Q
Sbjct: 368 SSNP-PLATILIPPHARIQA 386
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 493 bits (1269), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/360 (65%), Positives = 291/360 (80%), Gaps = 5/360 (1%)
Query: 46 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVL 105
D +G++ ++ T G+ Q +SY +++G GSFGVV+QAK ++GE VAIKKVL
Sbjct: 10 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 67
Query: 106 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNK 164
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++
Sbjct: 68 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 127
Query: 165 LNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 224
Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 128 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Query: 225 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLV 284
V+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLV
Sbjct: 187 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
Query: 285 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNL 344
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 247 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 306
Query: 345 RCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQC 404
R T L+A H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR Q
Sbjct: 307 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQA 365
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 493 bits (1268), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/352 (66%), Positives = 287/352 (81%), Gaps = 6/352 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 8 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 67
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 128 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
YICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 246
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 247 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 306
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQC 404
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR Q
Sbjct: 307 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQA 357
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 491 bits (1263), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/360 (64%), Positives = 290/360 (80%), Gaps = 5/360 (1%)
Query: 46 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVL 105
D +G++ ++ T G+ Q +SY +++G GSFGVV+QAK ++GE VAIKKVL
Sbjct: 9 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 66
Query: 106 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNK 164
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++
Sbjct: 67 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 165 LNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 224
Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 225 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLV 284
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLV
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 285 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNL 344
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 246 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 305
Query: 345 RCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQC 404
R T L+A H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR Q
Sbjct: 306 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQA 364
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 490 bits (1262), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/377 (63%), Positives = 295/377 (78%), Gaps = 14/377 (3%)
Query: 29 MNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVF 88
MK+ DK DG+ T +V T G +P Q +SY +++G GSFGVV+
Sbjct: 1 FGSMKVSRDK-------DGSKVTT---VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVY 49
Query: 89 QAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLV 147
QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLV
Sbjct: 50 QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 109
Query: 148 LEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVN 207
L+YVPETV+RV +H+++ Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++
Sbjct: 110 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLD 168
Query: 208 PHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAEL 267
P T +KLCDFGSAK LV+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL
Sbjct: 169 PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
Query: 268 MLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP 327
+LG+P+FPGDSGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R P
Sbjct: 229 LLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTP 288
Query: 328 PEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSV 387
PEA+ L SRLL+Y+P R T L+A H FFDELRDPN +LP+GR P LFNF + EL S
Sbjct: 289 PEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN 348
Query: 388 PVEILVKLIPEHARKQC 404
P + LIP HAR Q
Sbjct: 349 P-PLATILIPPHARIQA 364
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 490 bits (1262), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/360 (64%), Positives = 290/360 (80%), Gaps = 5/360 (1%)
Query: 46 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVL 105
D +G++ ++ T G+ Q +SY +++G GSFGVV+QAK ++GE VAIKKVL
Sbjct: 16 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 73
Query: 106 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNK 164
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++
Sbjct: 74 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 133
Query: 165 LNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 224
Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 134 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 225 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLV 284
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLV
Sbjct: 193 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
Query: 285 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNL 344
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 253 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 312
Query: 345 RCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQC 404
R T L+A H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR Q
Sbjct: 313 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQA 371
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 490 bits (1261), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/360 (64%), Positives = 290/360 (80%), Gaps = 5/360 (1%)
Query: 46 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVL 105
D +G++ ++ T G+ Q +SY +++G GSFGVV+QAK ++GE VAIKKVL
Sbjct: 5 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 62
Query: 106 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNK 164
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++
Sbjct: 63 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 122
Query: 165 LNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 224
Q +P+IYVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 123 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
Query: 225 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLV 284
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLV
Sbjct: 182 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
Query: 285 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNL 344
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 242 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 301
Query: 345 RCTALDALIHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQC 404
R T L+A H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR Q
Sbjct: 302 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQA 360
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 489 bits (1259), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/349 (67%), Positives = 286/349 (81%), Gaps = 6/349 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
YICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHAR 401
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/351 (66%), Positives = 286/351 (81%), Gaps = 6/351 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQ 403
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR Q
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQ 351
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 486 bits (1251), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/349 (66%), Positives = 285/349 (81%), Gaps = 6/349 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 7 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 66
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 127 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 245
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 246 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 305
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHAR 401
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR
Sbjct: 306 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 353
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/349 (66%), Positives = 285/349 (81%), Gaps = 6/349 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHAR 401
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/349 (66%), Positives = 285/349 (81%), Gaps = 6/349 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 4 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 63
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 124 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 242
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 243 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 302
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHAR 401
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR
Sbjct: 303 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 350
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 484 bits (1245), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/349 (66%), Positives = 284/349 (81%), Gaps = 6/349 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
YICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHAR 401
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 483 bits (1243), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/351 (66%), Positives = 284/351 (80%), Gaps = 6/351 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
YICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEF FPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQ 403
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR Q
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQ 351
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 483 bits (1243), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/349 (66%), Positives = 284/349 (81%), Gaps = 6/349 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K D +YLNLVL+YVPETV+RV +H+++ Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHAR 401
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/349 (65%), Positives = 281/349 (80%), Gaps = 6/349 (1%)
Query: 57 VTTIGGRNGQPK---QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 113
VTT+ GQ Q +SY +++G GSFGVV+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI 172
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+YVP TV+RV +H+++ Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 173 YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
YVKLY YQ+FR+L+YIH S G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
ICSRYYRAPELIFGAT+YT++ID+WSAGCV+AEL+LG+P+FPGDSGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
PTRE+I+ MNPNYTEF FPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T L+A
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 353 IHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHAR 401
H FFDELRDPN +LP+GR P LFNF + EL S P + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/350 (64%), Positives = 284/350 (81%), Gaps = 5/350 (1%)
Query: 55 IIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE 114
I V G+ G+ ++ I+Y +++G GSFGVVFQAK +E+ E VAIKKVLQDKR+KNRE
Sbjct: 25 IKVLASDGKTGEQRE-IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE 82
Query: 115 LQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY 173
LQ MR++ HPNVV LK F+S DK DE++LNLVLEYVPETV+R +H+ KL Q MPM+
Sbjct: 83 LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL 142
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+KLY YQ+ R+L+YIH SIG+CHRDIKPQNLL++P + +KL DFGSAK+L+ GEPN+S
Sbjct: 143 IKLYMYQLLRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 234 ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
ICSRYYRAPELIFGAT YTT IDIWS GCV+AELM G+PLFPG+SG+DQLVEIIKVLGTP
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+RE+IK MNPNY E KFPQI+ HP+ K+F R PP+A+DL+SRLL+Y+P+ R TA++AL
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Query: 354 HPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQ 403
HPFFDELR AR+P+GR LPPLFN+ EL SV +++ +L+P+HA +
Sbjct: 322 HPFFDELRTGEARMPNGRELPPLFNWTKEEL-SVRPDLISRLVPQHAEAE 370
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 349 bits (896), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/369 (45%), Positives = 245/369 (66%), Gaps = 43/369 (11%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 132
Y + +G GSFG+V + +E+G+ A+KKVLQD RYKNREL M++LDH N++ L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 133 FFSTTDKD---------------------------------ELYLNLVLEYVPETVHRVV 159
F++T D++ YLN+++EYVP+T+H+V+
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 160 KHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG 219
K F + + +PM + +Y YQ+FRA+ +IH S+G+CHRDIKPQNLLVN + +KLCDFG
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIH-SLGICHRDIKPQNLLVNSKDNTLKLCDFG 187
Query: 220 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSG 279
SAK L+ EP+++ ICSR+YRAPEL+ GATEYT +ID+WS GCV EL+LGKPLF G++
Sbjct: 188 SAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS 247
Query: 280 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQ 339
+DQLV II+++GTPT+E++ MNP+YTE +FP +KA W KI P+ P A+DL+ ++L+
Sbjct: 248 IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307
Query: 340 YSPNLRCTALDALIHPFFDELRDP-------NARLPSG--RFLPPLFNFKSHELKSVPVE 390
Y P+LR +A+ HPFFD LR+ N+ P G + +P LFNF +EL +P
Sbjct: 308 YEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGN 367
Query: 391 ILVKLIPEH 399
+L +++P++
Sbjct: 368 VLNRILPKN 376
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/339 (47%), Positives = 227/339 (66%), Gaps = 10/339 (2%)
Query: 68 KQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR---LLDHP 124
K+ + ER+ GQG+FG V K TG +VAIKKV+QD R++NRELQ M+ +L HP
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 125 NVVSLKHCFFSTTDKD--ELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
N+V L+ F++ ++D ++YLN+V+EYVP+T+HR +++ + P I +K++ +Q+
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 183 RALSYIHR-SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
R++ +H S+ VCHRDIKP N+LVN +KLCDFGSAK L EPN++YICSRYYRA
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PELIFG YTTA+DIWS GC+ AE+MLG+P+F GD+ QL EI++VLG P+RE ++ +
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 302 NPNYTEFKFPQIKAHPWHKIFPK---RMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFD 358
NP++T+ K PW +F + EA DL+S LLQY P R +AL HP+FD
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 359 ELRDPNARLPSGRFLPP-LFNFKSHELKSVPVEILVKLI 396
EL DP +LP+ + LP LF F +E++ + KL+
Sbjct: 320 ELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQKAKLV 358
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 172/297 (57%), Gaps = 26/297 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
VG+G++GVV++AK G VA+K++ D + RE+ ++ L HPN+VSL
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
S E L LV E++ + + +V+ NK + I K+Y YQ+ R +++ H+
Sbjct: 88 IHS-----ERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQI--KIYLYQLLRGVAHCHQH- 138
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
+ HRD+KPQNLL+N +KL DFG A+ G P SY + + +YRAP+++ G+
Sbjct: 139 RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 307
+Y+T++DIWS GC+ AE++ GKPLFPG + DQL +I +LGTP E + P + +
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
F + PW I P E +DL+S +L + PN R +A DA+ HP+F +L DP
Sbjct: 256 RTFQVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL-DPQ 310
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 172/297 (57%), Gaps = 26/297 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
VG+G++GVV++AK G VA+K++ D + RE+ ++ L HPN+VSL
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
S E L LV E++ + + +V+ NK + I K+Y YQ+ R +++ H+
Sbjct: 88 IHS-----ERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQI--KIYLYQLLRGVAHCHQH- 138
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
+ HRD+KPQNLL+N +KL DFG A+ G P SY + + +YRAP+++ G+
Sbjct: 139 RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 307
+Y+T++DIWS GC+ AE++ GKPLFPG + DQL +I +LGTP E + P + +
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
F + PW I P E +DL+S +L + PN R +A DA+ HP+F +L DP
Sbjct: 256 RTFQVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL-DPQ 310
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 177/315 (56%), Gaps = 28/315 (8%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------REL 115
G G P+ ++ +G+G++GVV++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 116 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIY 173
++ L+HPN+V L + +++LYL V E +H+ +K F + +P+
Sbjct: 61 SLLKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPL 111
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+K Y +Q+ + L++ H S V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 112 IKSYLFQLLQGLAFCH-SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTY 167
Query: 234 ---ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVL 290
+ + +YRAPE++ G Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + L
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 291 GTPTREEIKCMN--PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTA 348
GTP + P+Y FP+ + K+ P + + L+S++L Y PN R +A
Sbjct: 228 GTPDEVVWPGVTSMPDYKP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISA 285
Query: 349 LDALIHPFFDELRDP 363
AL HPFF ++ P
Sbjct: 286 KAALAHPFFQDVTKP 300
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 192/345 (55%), Gaps = 29/345 (8%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNRELQTMRLLDHPNV 126
+ + ++G+G++GVV A TGE VAIKK+ + RE++ ++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+++ + + ++ + ++ E + +HRV+ Q + +++ + YQ RA+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVK 126
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-----------YIC 235
+H S V HRD+KP NLL+N + +K+CDFG A+++ + + S Y+
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 236 SRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP-T 294
+R+YRAPE++ + +Y+ A+D+WS GC++AEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 295 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDA 351
+++C+ +P E+ P A P K+FP R+ P+ +DL+ R+L + P R TA +A
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFP-RVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 352 LIHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLI 396
L HP+ DPN P G +PP F H +++ + L KLI
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 177/315 (56%), Gaps = 28/315 (8%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------REL 115
G G P+ ++ +G+G++GVV++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 116 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIY 173
++ L+HPN+V L + +++LYL V E +H+ +K F + +P+
Sbjct: 61 SLLKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPL 111
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+K Y +Q+ + L++ H S V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 112 IKSYLFQLLQGLAFCH-SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTY 167
Query: 234 ---ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVL 290
+ + +YRAPE++ G Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + L
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 291 GTPTREEIKCMN--PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTA 348
GTP + P+Y FP+ + K+ P + + L+S++L Y PN R +A
Sbjct: 228 GTPDEVVWPGVTSMPDYKP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISA 285
Query: 349 LDALIHPFFDELRDP 363
AL HPFF ++ P
Sbjct: 286 KAALAHPFFQDVTKP 300
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 194/345 (56%), Gaps = 29/345 (8%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLLDH---PNV 126
+ + ++G+G++GVV A TGE VAIKK+ + R L+ +++L H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+++ + + ++ + ++ E + +HRV+ Q + +++ + YQ RA+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVK 126
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-----EPN------ISYIC 235
+H S V HRD+KP NLL+N + +K+CDFG A+++ + EP + ++
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 236 SRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP-T 294
+R+YRAPE++ + +Y+ A+D+WS GC++AEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 295 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDA 351
+++C+ +P E+ P A P K+FP R+ P+ +DL+ R+L + P R TA +A
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFP-RVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 352 LIHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLI 396
L HP+ DPN P G +PP F H +++ + L KLI
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 195/349 (55%), Gaps = 36/349 (10%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 127
Y + +G+G++G+V A VAIKK+ + + Y R L+ +++L H NV+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
++ ++T + + +V + + +++++K +Q++ ++ + YQI R L Y
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLK-----SQQLSNDHICYFLYQILRGLKY 159
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPE 243
IH S V HRD+KP NLL+N T +K+CDFG A++ + + + +R+YRAPE
Sbjct: 160 IH-SANVLHRDLKPSNLLINT-TCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM-- 301
++ + YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 302 --NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
NY + P W K+FPK +A+DL+ R+L ++PN R T +AL HP+ ++
Sbjct: 278 MKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
Query: 360 LRDPN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLI-PEHARKQ 403
DP A P F F + EL +P E L +LI E AR Q
Sbjct: 336 YYDPTDEPVAEEP--------FTF-AMELDDLPKERLKELIFQETARFQ 375
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + LS+ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E VH+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 70 IHT---ENKLYL------VFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 119
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 237 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 72 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 121
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 178
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 239 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 74 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 123
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 241 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 72 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 121
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 239 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 74 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 123
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 241 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 73 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 122
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 240 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 75 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 124
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 181
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 242 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 73 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 122
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 240 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 119
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 237 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 75 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 124
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 181
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 242 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 74 IHT---ENKLYL------VFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 123
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 241 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 72 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 121
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 239 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 119
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 237 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 119
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 237 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 119
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 237 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 170/296 (57%), Gaps = 24/296 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ +++LYL V E+V + + + + +P+I K Y +Q+ + L++ H S
Sbjct: 74 IHT---ENKLYL--VFEHVDQDLKKFMDASALTGIPLPLI--KSYLFQLLQGLAFCH-SH 125
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 307
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 243 -SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 191/345 (55%), Gaps = 29/345 (8%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNRELQTMRLLDHPNV 126
+ + ++G+G++GVV A TGE VAIKK+ + RE++ ++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+++ + + ++ + ++ E + +HRV+ Q + +++ + YQ RA+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVK 126
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-----------YIC 235
+H S V HRD+KP NLL+N + +K+CDFG A+++ + + S +
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 236 SRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP-T 294
+R+YRAPE++ + +Y+ A+D+WS GC++AEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 295 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDA 351
+++C+ +P E+ P A P K+FP R+ P+ +DL+ R+L + P R TA +A
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFP-RVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 352 LIHPFFDELRDPNARLPSGRFLPPLFNFKSHELKSVPVEILVKLI 396
L HP+ DPN P G +PP F H +++ + L KLI
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 72 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 121
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 SHRVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 239 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 73 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 122
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 SHRVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 240 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 169/294 (57%), Gaps = 28/294 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF +
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+ K+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 238 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+ K+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQR--MPMIYVKLYAYQIFRALSYIHR 190
+ +++LYL V E +H+ +K F + +P+ +K Y +Q+ + L++ H
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 119
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 247
S V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNY 305
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 237 KP-SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 177/333 (53%), Gaps = 57/333 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQ------DKRYKNRELQTM-RLLDHPNVVSLKH 131
+G+G++G+V+++ TGE VA+KK+ D + RE+ + L H N+V+L +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ D+D + LV +Y+ +H V++ + ++ + YQ+ + + Y+H S
Sbjct: 77 VLRADNDRD---VYLVFDYMETDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLH-S 127
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK---------------------GEPN 230
G+ HRD+KP N+L+N H VK+ DFG ++ V +P
Sbjct: 128 GGLLHRDMKPSNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 231 IS-YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKV 289
++ Y+ +R+YRAPE++ G+T+YT ID+WS GC++ E++ GKP+FPG S ++QL II V
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246
Query: 290 LGTPTREEIKCMNPNYTEFKFPQIKAH-------------PWHKIFPKRMPP-----EAV 331
+ P+ E+++ + + + +K W + K P EA+
Sbjct: 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEAL 306
Query: 332 DLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
DL+ +LLQ++PN R +A DAL HPF +PN
Sbjct: 307 DLLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 323 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 360
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 169/296 (57%), Gaps = 24/296 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ +++LYL V E++ + + + +P+I K Y +Q+ + L++ H S
Sbjct: 72 IHT---ENKLYL--VFEFLSMDLKKFMDASALTGIPLPLI--KSYLFQLLQGLAFCH-SH 123
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 307
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 241 -SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 168/296 (56%), Gaps = 24/296 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ +++LYL V E++ + + +P+I K Y +Q+ + L++ H S
Sbjct: 73 IHT---ENKLYL--VFEFLSMDLKDFMDASALTGIPLPLI--KSYLFQLLQGLAFCH-SH 124
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 307
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 242 -SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 169/296 (57%), Gaps = 24/296 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ +++LYL V E++ + + + +P+I K Y +Q+ + L++ H S
Sbjct: 74 IHT---ENKLYL--VFEFLSMDLKKFMDASALTGIPLPLI--KSYLFQLLQGLAFCH-SH 125
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 307
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 243 -SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 168/296 (56%), Gaps = 24/296 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ +++LYL V E++ + + +P+I K Y +Q+ + L++ H S
Sbjct: 74 IHT---ENKLYL--VFEFLSMDLKDFMDASALTGIPLPLI--KSYLFQLLQGLAFCH-SH 125
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 307
Y+TA+DIWS GC+ AE++ + LFPGDS +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
FP+ + K+ P + + L+S++L Y PN R +A AL HPFF ++ P
Sbjct: 243 -SFPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 187/347 (53%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + LV + +++++K Q + ++ + YQI R L YIH S
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 164
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 165 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 281 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 338
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 339 PSDEPIAEAP--------FKFDM-ELDDLPKEKLKELIFEETARFQP 376
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 323 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 360
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 319 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 356
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 152
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 153 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 268
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 269 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 326
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 327 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 319 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 356
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 149
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 150 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 266 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 323
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 324 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 150
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 151 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 266
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 267 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 324
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 325 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 141
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 142 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 257
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 258 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 315
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 316 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 323 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 360
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 146
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 263 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 320
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 321 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 358
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 164
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 165 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 281 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 338
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 339 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 376
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 142
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 143 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 258
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 259 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 316
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 317 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 354
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 166/301 (55%), Gaps = 22/301 (7%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK------VLQDKRYKNRELQTMRLLDHPNVVSLKHC 132
+G G++GVV A+ TG+ VAIKK V+ + + REL+ ++ H N++++K
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 133 FFSTTDKDEL-YLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
T E + +VL+ + +H+++ +Q + + +V+ + YQ+ R L Y+H S
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMH-S 176
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-----ISYICSRYYRAPELIF 246
V HRD+KP NLLVN + ++K+ DFG A+ L Y+ +R+YRAPEL+
Sbjct: 177 AQVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
EYT AID+WS GC+ E++ + LFPG + V QL I+ VLGTP+ I+ +
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 295
Query: 307 EF---KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
P + PW ++P +A+ L+ R+L++ P+ R +A AL HPF + DP
Sbjct: 296 RAYIQSLPPRQPVPWETVYPG-ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDP 354
Query: 364 N 364
+
Sbjct: 355 D 355
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 319 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 356
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 166/301 (55%), Gaps = 22/301 (7%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK------VLQDKRYKNRELQTMRLLDHPNVVSLKHC 132
+G G++GVV A+ TG+ VAIKK V+ + + REL+ ++ H N++++K
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 133 FFSTTDKDEL-YLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
T E + +VL+ + +H+++ +Q + + +V+ + YQ+ R L Y+H S
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMH-S 177
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-----ISYICSRYYRAPELIF 246
V HRD+KP NLLVN + ++K+ DFG A+ L Y+ +R+YRAPEL+
Sbjct: 178 AQVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
EYT AID+WS GC+ E++ + LFPG + V QL I+ VLGTP+ I+ +
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 296
Query: 307 EF---KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
P + PW ++P +A+ L+ R+L++ P+ R +A AL HPF + DP
Sbjct: 297 RAYIQSLPPRQPVPWETVYPG-ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDP 355
Query: 364 N 364
+
Sbjct: 356 D 356
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 185/346 (53%), Gaps = 39/346 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 146
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 147 VLHRDLKPSNLLLNT-TSDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKC---MNP 303
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKA 262
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
P PW+++FP +A+DL+ ++L ++P+ R AL HP+ + DP
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDP 321
Query: 364 N----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
+ A P F F EL +P E L +LI E + P
Sbjct: 322 SDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 358
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAI+K+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 323 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 360
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 187/347 (53%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 142
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 143 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P +E++ C+
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKA 258
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 259 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 316
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 317 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 354
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 188/347 (54%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----CQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 323 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 360
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 187/347 (53%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 146
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----N 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ + D
Sbjct: 263 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYD 320
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 321 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 358
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 170/311 (54%), Gaps = 23/311 (7%)
Query: 58 TTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQD------KRYK 111
+G N + Y +VG+GS+G+V + + +TG VAIKK L+ K+
Sbjct: 12 VDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA 71
Query: 112 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHF-NKLNQRMP 170
RE++ ++ L H N+V+L K YL V E+V T+ ++ F N L+ ++
Sbjct: 72 MREIKLLKQLRHENLVNLLEV---CKKKKRWYL--VFEFVDHTILDDLELFPNGLDYQV- 125
Query: 171 MIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK-GEP 229
V+ Y +QI + + H S + HRDIKP+N+LV+ + VKLCDFG A+ L GE
Sbjct: 126 ---VQKYLFQIINGIGFCH-SHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEV 180
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKV 289
+ +R+YRAPEL+ G +Y A+D+W+ GC+V E+ +G+PLFPGDS +DQL I+
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240
Query: 290 LGT--PTREEIKCMNPNYTEFKFPQIKA-HPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC 346
LG P +E+ NP + + P+IK P + +PK + +DL + L P+ R
Sbjct: 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPK-LSEVVIDLAKKCLHIDPDKRP 299
Query: 347 TALDALIHPFF 357
+ L H FF
Sbjct: 300 FCAELLHHDFF 310
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 186/344 (54%), Gaps = 35/344 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPELIFGAT 249
V HRD+KP NLL+N T +K+CDFG A+V + + + +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----NPNY 305
YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+ NY
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN- 364
P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ DP+
Sbjct: 268 L-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
Query: 365 ---ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
A P F F EL +P E L +LI E + P
Sbjct: 326 EPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 186/344 (54%), Gaps = 35/344 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 149
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPELIFGAT 249
V HRD+KP NLL+N T +K+CDFG A+V + + + +R+YRAPE++ +
Sbjct: 150 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM----NPNY 305
YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 268
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN- 364
P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ DP+
Sbjct: 269 L-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 326
Query: 365 ---ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
A P F F EL +P E L +LI E + P
Sbjct: 327 EPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 361
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 186/347 (53%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE----IKCMN 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E+ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 319 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 356
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 25/296 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQD------KRYKNRELQTMRLLDHPNVVSLKHC 132
+G+GS+GVVF+ + +TG+ VAIKK L+ K+ RE++ ++ L HPN+V+L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
F + + L+LV EY H V+ ++ + +P VK +Q +A+++ H+
Sbjct: 71 F-----RRKRRLHLVFEYCD---HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH- 121
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
HRD+KP+N+L+ H+ +KLCDFG A++L P+ Y + +R+YR+PEL+ G T
Sbjct: 122 NCIHRDVKPENILITKHS-VIKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGDT 178
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLG--TPTREEIKCMNPNYTE 307
+Y +D+W+ GCV AEL+ G PL+PG S VDQL I K LG P +++ N ++
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238
Query: 308 FKFPQIK-AHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
K P + P FP P A+ L+ L P R T L HP+F+ +R+
Sbjct: 239 VKIPDPEDMEPLELKFPNISYP-ALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 163/304 (53%), Gaps = 23/304 (7%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPN 125
+Y++ VG G++G V A +GE VAIKK+ Q + + R EL ++ + H N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 126 VVSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
V+ L F + Y LV+ ++ + ++ + + ++ YQ+ +
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI------MGLKFSEEKIQYLVYQMLKG 138
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAPE 243
L YIH S GV HRD+KP NL VN ++K+ DFG A+ + ++ Y+ +R+YRAPE
Sbjct: 139 LKYIH-SAGVVHRDLKPGNLAVNEDC-ELKILDFGLAR---HADAEMTGYVVTRWYRAPE 193
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
+I Y +DIWS GC++AE++ GK LF G +DQL +I+KV G P E ++ +N
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 253
Query: 304 NYTEF---KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDEL 360
+ PQ + ++FP R P+A DL+ ++L+ + R TA AL HPFF+
Sbjct: 254 KAAKSYIQSLPQTPRKDFTQLFP-RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312
Query: 361 RDPN 364
RDP
Sbjct: 313 RDPE 316
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 162/304 (53%), Gaps = 23/304 (7%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPN 125
+Y++ VG G++G V A +GE VAIKK+ Q + + R EL ++ + H N
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 126 VVSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
V+ L F + Y LV+ ++ + ++ + ++ YQ+ +
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI------MGMEFSEEKIQYLVYQMLKG 156
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAPE 243
L YIH S GV HRD+KP NL VN ++K+ DFG A+ + ++ Y+ +R+YRAPE
Sbjct: 157 LKYIH-SAGVVHRDLKPGNLAVNEDC-ELKILDFGLAR---HADAEMTGYVVTRWYRAPE 211
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
+I Y +DIWS GC++AE++ GK LF G +DQL +I+KV G P E ++ +N
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 271
Query: 304 NYTEF---KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDEL 360
+ PQ + ++FP R P+A DL+ ++L+ + R TA AL HPFF+
Sbjct: 272 KAAKSYIQSLPQTPRKDFTQLFP-RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330
Query: 361 RDPN 364
RDP
Sbjct: 331 RDPE 334
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 170/308 (55%), Gaps = 23/308 (7%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV 126
+Y+ +G+G++ V++ K T VA+K++ + RE+ ++ L H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
V+L H T E L LV EY+ + + ++ + + M VKL+ +Q+ R L+
Sbjct: 63 VTL-HDIIHT----EKSLTLVFEYLDKDLK---QYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPE 243
Y HR V HRD+KPQNLL+N ++KL DFG A+ K P +Y + + +YR P+
Sbjct: 115 YCHRQ-KVLHRDLKPQNLLINERG-ELKLADFGLARA--KSIPTKTYDNEVVTLWYRPPD 170
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM-- 301
++ G+T+Y+T ID+W GC+ E+ G+PLFPG + +QL I ++LGTPT E +
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 230
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELR 361
N + + +P+ +A P R+ + DL+++LLQ+ R +A DA+ HPFF L
Sbjct: 231 NEEFKTYNYPKYRAEALLSHAP-RLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG 289
Query: 362 DPNARLPS 369
+ +LP
Sbjct: 290 ERIHKLPD 297
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 161/295 (54%), Gaps = 31/295 (10%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 128
+G+G F V++A+ T + VAIKK+ R + RE++ ++ L HPN++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L F ++ ++LV +++ + ++K N L + ++K Y + L Y+
Sbjct: 77 LLDAFGHKSN-----ISLVFDFMETDLEVIIKD-NSL--VLTPSHIKAYMLMTLQGLEYL 128
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELI 245
H+ + HRD+KP NLL++ +KL DFG AK G PN +Y + +R+YRAPEL+
Sbjct: 129 HQHW-ILHRDLKPNNLLLD-ENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELL 184
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI--KCMNP 303
FGA Y +D+W+ GC++AEL+L P PGDS +DQL I + LGTPT E+ C P
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 304 NYTEFK-FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+Y FK FP I P H IF + +DL+ L ++P R TA AL +F
Sbjct: 245 DYVTFKSFPGI---PLHHIF-SAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 185/347 (53%), Gaps = 41/347 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ T + + +V + + +++++K Q + ++ + YQI R L YIH S
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 246
V HRD+KP NLL+N T +K+ DFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKIXDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE----IKCMN 302
+ YT +IDIWS GC++AE++ +P+FPG +DQL I+ +LG+P++E+ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
NY P PW+++FP +A+DL+ ++L ++P+ R AL HP+ ++ D
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 363 PN----ARLPSGRFLPPLFNFKSHELKSVPVEILVKLIPEHARKQCP 405
P+ A P F F EL +P E L +LI E + P
Sbjct: 319 PSDEPIAEAP--------FKF-DMELDDLPKEKLKELIFEETARFQP 356
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 166/302 (54%), Gaps = 36/302 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++G VF+AK ET E VA+K+V D + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
S DK L LV E+ + + K+F+ N + VK + +Q+ + L + H S
Sbjct: 70 LHS--DKK---LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCH-SR 120
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KPQNLL+N ++KL +FG A+ G P Y + + +YR P+++FGA
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 250 EYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
Y+T+ID+WSAGC+ AEL G+PLFPG+ DQL I ++LGTPT E+ M
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------ 231
Query: 309 KFPQIKAHPWH-------KIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELR 361
K P K +P + + PK + DL+ LL+ +P R +A +AL HP+F +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPK-LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290
Query: 362 DP 363
P
Sbjct: 291 PP 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 165/302 (54%), Gaps = 36/302 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++G VF+AK ET E VA+K+V D + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
S DK L LV E+ + + K+F+ N + VK + +Q+ + L + H S
Sbjct: 70 LHS--DKK---LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCH-SR 120
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KPQNLL+N ++KL DFG A+ G P Y + + +YR P+++FGA
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 250 EYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
Y+T+ID+WSAGC+ AEL +PLFPG+ DQL I ++LGTPT E+ M
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------ 231
Query: 309 KFPQIKAHPWH-------KIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELR 361
K P K +P + + PK + DL+ LL+ +P R +A +AL HP+F +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPK-LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290
Query: 362 DP 363
P
Sbjct: 291 PP 292
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 24/300 (8%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 130
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 131 HCFFSTT---DKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
F T D E+YL V + ++ +VK +Q + +V+ YQ+ R L Y
Sbjct: 94 DVFTPATSIEDFSEVYL--VTTLMGADLNNIVK-----SQALSDEHVQFLVYQLLRGLKY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
IH S G+ HRD+KP N+ VN + ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 147 IH-SAGIIHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLN 202
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTE 307
Y +DIWS GC++AEL+ GK LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 262
Query: 308 F---KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
P + IF + P A+DL+ R+L + R +A +AL H +F + DP
Sbjct: 263 TYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 321
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 164/296 (55%), Gaps = 34/296 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ GET A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ L LV E++ + + +++ + + + K + Q+ ++Y H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KPQNLL+N ++K+ DFG A+ G P Y I + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTRE------EIKCMNP 303
+Y+T IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP + E+ +P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
N+T + + PW F K + +DL+S++L+ PN R TA AL H +F E
Sbjct: 237 NFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 158/300 (52%), Gaps = 24/300 (8%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 130
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 131 HCFFSTT---DKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
F T D E+YL V + ++ +VK Q + +V+ YQ+ R L Y
Sbjct: 94 DVFTPATSIEDFSEVYL--VTTLMGADLNNIVK-----CQALSDEHVQFLVYQLLRGLKY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
IH S G+ HRD+KP N+ VN + ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 147 IH-SAGIIHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLN 202
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTE 307
Y +DIWS GC++AEL+ GK LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 262
Query: 308 F---KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
P + IF + P A+DL+ R+L + R +A +AL H +F + DP
Sbjct: 263 TYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 321
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 164/296 (55%), Gaps = 34/296 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ GET A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ L LV E++ + + +++ + + + K + Q+ ++Y H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KPQNLL+N ++K+ DFG A+ G P Y + + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTRE------EIKCMNP 303
+Y+T IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP + E+ +P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
N+T + + PW F K + +DL+S++L+ PN R TA AL H +F E
Sbjct: 237 NFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 164/296 (55%), Gaps = 34/296 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++GVV++A+ GET A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ L LV E++ + + +++ + + + K + Q+ ++Y H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 249
V HRD+KPQNLL+N ++K+ DFG A+ G P Y + + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTRE------EIKCMNP 303
+Y+T IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP + E+ +P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
N+T + + PW F K + +DL+S++L+ PN R TA AL H +F E
Sbjct: 237 NFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 24/300 (8%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 130
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 131 HCFFSTT---DKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
F T D E+YL V + ++ +VK Q + +V+ YQ+ R L Y
Sbjct: 86 DVFTPATSIEDFSEVYL--VTTLMGADLNNIVK-----CQALSDEHVQFLVYQLLRGLKY 138
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
IH S G+ HRD+KP N+ VN ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 139 IH-SAGIIHRDLKPSNVAVNEDC-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLN 194
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTE 307
Y +DIWS GC++AEL+ GK LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 254
Query: 308 F---KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
P + IF + P A+DL+ R+L + R +A +AL H +F + DP
Sbjct: 255 TYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 313
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 160/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V + +++G +A+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 117
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F T +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 171
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 172 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 228
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG ++QL +I+++ GTP I M NY
Sbjct: 229 YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYI 288
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
PQ+ + +F P AVDL+ ++L + R TA +AL HP+F + DP+
Sbjct: 289 N-SLPQMPKRNFADVFIG-ANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPD 344
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 157/295 (53%), Gaps = 22/295 (7%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNRELQTMRLLDH---PNVVSLKHC 132
VG G++G V A TG VAIKK+ Q + + R + +RLL H NV+ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F D+ LV+ ++ + +++KH +++ ++ YQ+ + L YIH +
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIH-A 146
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP NL VN ++K+ DFG A+ + +R+YRAPE+I Y
Sbjct: 147 AGIIHRDLKPGNLAVNEDC-ELKILDFGLARQ--ADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYTE 307
T +DIWS GC++AE++ GK LF G +DQL EI+KV GTP E ++ + NY +
Sbjct: 204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
P+++ + I P AV+L+ ++L R TA +AL HP+F+ L D
Sbjct: 264 -GLPELEKKDFASILTN-ASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 160/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ A
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----XQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 160/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 148
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN + ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 SADIIHRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 266 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 160/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 144
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN + ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 145 SADIIHRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 262 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 148
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 266 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 162
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 163 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 219
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 280 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----XQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 161
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 162 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 218
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 278
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 279 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 334
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 98
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 152
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 153 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 209
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 210 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 269
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 270 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 325
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 138
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 139 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 256 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 160/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK +Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----SQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN + ++K+ DFG + + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDS-ELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 153
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 154 SADIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 210
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 270
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 271 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 326
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 150 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMH 206
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 267 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 150 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMH 206
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 267 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 150 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMH 206
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 267 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 147
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 148 SADIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 265 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 154
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 155 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 272 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 154
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 155 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 272 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 154
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 155 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 272 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 165
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 166 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 222
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 282
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 283 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 338
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 153
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 154 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 210
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 270
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 271 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 326
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 162
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 163 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 219
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 280 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 144
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 145 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 262 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 150 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 206
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 267 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 165
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 166 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWMH 222
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 282
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 283 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 338
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 148
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 266 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 148
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 266 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 147
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 148 SADIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 265 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 144
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 145 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 262 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 147
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 148 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 265 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 161
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 162 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 218
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 278
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 279 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 334
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 147
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 148 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 265 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 87
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 141
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 198
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 199 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 258
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 259 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 314
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 144
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 145 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 262 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 139
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 140 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 196
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 256
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 257 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 312
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 86
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 140
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 141 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 197
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 198 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 257
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 258 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 138
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 139 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 256 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 139
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 140 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 196
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 256
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 257 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 312
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 138
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++
Sbjct: 139 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMH 195
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 256 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK ++ +V+ YQI R L YIH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CAKLTDDHVQFLIYQILRGLKYIH- 138
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 139 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 256 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ D+G A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 162
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + + +R+YRAPE++
Sbjct: 163 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWMH 219
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 280 Q-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DF A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ FG A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ DFG A+ + + +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 24/298 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 131
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 132 CFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +E + LV + ++ +VK Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
S + HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++
Sbjct: 143 SADIIHRDLKPSNLAVNEDC-ELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP----NYT 306
Y +DIWS GC++AEL+ G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
+ Q+ + +F P AVDL+ ++L + R TA AL H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 159/312 (50%), Gaps = 30/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV------------LQDKRYKNRELQTMRL 120
Y +R + GS+G V A G VAIK+V L D R L+ +RL
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 121 LDH---PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVK 175
L+H PN++ L+ F + L LV E + + +V+ +QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 176 LYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 235
+ Y I L +H + GV HRD+ P N+L+ + + +CDF A+ Y+
Sbjct: 138 YFMYHILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVT 195
Query: 236 SRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTR 295
R+YRAPEL+ +T +D+WSAGCV+AE+ K LF G + +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 296 EEIKCMNP----NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDA 351
E++ + +Y + A W + P P A+DL++++L+++P R + A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 352 LIHPFFDELRDP 363
L HP+F+ L DP
Sbjct: 315 LRHPYFESLFDP 326
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 159/312 (50%), Gaps = 30/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV------------LQDKRYKNRELQTMRL 120
Y +R + GS+G V A G VAIK+V L D R L+ +RL
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 121 LDH---PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVK 175
L+H PN++ L+ F + L LV E + + +V+ +QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 176 LYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 235
+ Y I L +H + GV HRD+ P N+L+ + + +CDF A+ Y+
Sbjct: 138 YFMYHILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVT 195
Query: 236 SRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTR 295
R+YRAPEL+ +T +D+WSAGCV+AE+ K LF G + +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 296 EEIKCMNP----NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDA 351
E++ + +Y + A W + P P A+DL++++L+++P R + A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 352 LIHPFFDELRDP 363
L HP+F+ L DP
Sbjct: 315 LRHPYFESLFDP 326
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 165/312 (52%), Gaps = 23/312 (7%)
Query: 79 VGQGSFGVVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNVVS 128
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 129 L-KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALS 186
L C S TD+ E L LV E+V + + + +K+ + +P +K +Q+ R L
Sbjct: 79 LFDVCTVSRTDR-ETKLTLVFEHVDQDL---TTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
++H S V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++
Sbjct: 135 FLH-SHRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
++ Y T +D+WS GC+ AE+ KPLF G S VDQL +I+ V+G P E+ +
Sbjct: 193 QSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALP 250
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNAR 366
F A P K F + DL+ + L ++P R +A AL HP+F +L
Sbjct: 251 RQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKEN 309
Query: 367 LPSGRFLPPLFN 378
L S LPP N
Sbjct: 310 LDS--HLPPSQN 319
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 159/294 (54%), Gaps = 21/294 (7%)
Query: 79 VGQGSFGVVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNVVS 128
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 129 L-KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALS 186
L C S TD+ E L LV E+V + + + +K+ + +P +K +Q+ R L
Sbjct: 79 LFDVCTVSRTDR-ETKLTLVFEHVDQDL---TTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
++H S V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++
Sbjct: 135 FLH-SHRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
++ Y T +D+WS GC+ AE+ KPLF G S VDQL +I+ V+G P E+ +
Sbjct: 193 QSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALP 250
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDEL 360
F A P K F + DL+ + L ++P R +A AL HP+F +L
Sbjct: 251 RQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 165/310 (53%), Gaps = 38/310 (12%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVV- 127
YM + +G G G+VF A + + VAIKK++ Q ++ RE++ +R LDH N+V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 128 ----------SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
L S T+ + +Y+ V EY+ + V++ L + + +L+
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYI--VQEYMETDLANVLEQGPLLEE-----HARLF 125
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---- 233
YQ+ R L YIH S V HRD+KP NL +N +K+ DFG A+++ +P+ S+
Sbjct: 126 MYQLLRGLKYIH-SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKGHL 181
Query: 234 ---ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQL---VEII 287
+ +++YR+P L+ YT AID+W+AGC+ AE++ GK LF G ++Q+ +E I
Sbjct: 182 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCT 347
V+ R+E+ + P Y + P ++ P + EAVD + ++L +SP R T
Sbjct: 242 PVVHEEDRQELLSVIPVYIRNDMTE-PHKPLTQLLPG-ISREAVDFLEQILTFSPMDRLT 299
Query: 348 ALDALIHPFF 357
A +AL HP+
Sbjct: 300 AEEALSHPYM 309
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 157/291 (53%), Gaps = 21/291 (7%)
Query: 79 VGQGSFGVVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNVVS 128
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 129 L-KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALS 186
L C S TD+ E L LV E+V + + + +K+ + +P +K +Q+ R L
Sbjct: 79 LFDVCTVSRTDR-ETKLTLVFEHVDQDL---TTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
++H S V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++
Sbjct: 135 FLH-SHRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
++ Y T +D+WS GC+ AE+ KPLF G S VDQL +I+ V+G P E+ +
Sbjct: 193 QSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALP 250
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
F A P K F + DL+ + L ++P R +A AL HP+F
Sbjct: 251 RQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 32/300 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNVVSLKHCF 133
+G G++ V++ TG VA+K+V D RE+ M+ L H N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLN--QRMPMIYVKLYAYQIFRALSYIHRS 191
+ E L LV E++ + + + N + + + VK + +Q+ + L++ H +
Sbjct: 73 HT-----ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 248
+ HRD+KPQNLL+N Q+KL DFG A+ G P ++ + + +YRAP+++ G+
Sbjct: 128 -KILHRDLKPQNLLINKRG-QLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
Y+T+IDIWS GC++AE++ GKPLFPG + +QL I ++GTP + + P+ T+
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN----ESLWPSVTKL 239
Query: 309 -KF-PQIKAHPWHKIFPKRMP-------PEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
K+ P I+ P + P +D + LLQ +P++R +A AL HP+F E
Sbjct: 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 31/306 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N++SL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + LV+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL-----LYQMLXGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + K+FP + P +A DL+S++L P R + DAL HP+
Sbjct: 263 R-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
Query: 358 DELRDP 363
+ DP
Sbjct: 322 NVWYDP 327
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL-----LYQMLXGI 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLH-SAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 257 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 316 LQHPYINVWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL-----LYQMLXGI 132
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 133 KHLH-SAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 191 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 250 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 309 LQHPYINVWYDP 320
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 31/306 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N++SL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + LV+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL-----LYQMLCGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + K+FP + P +A DL+S++L P R + DAL HP+
Sbjct: 263 R-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
Query: 358 DELRDP 363
+ DP
Sbjct: 322 NVWYDP 327
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 158/294 (53%), Gaps = 28/294 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+G+G++G V++A T ETVAIK++ + + RE+ ++ L H N++ LK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
L+L+ EY + K + N + M +K + YQ+ +++ H S
Sbjct: 102 IHHNH-----RLHLIFEYAENDL----KKYMDKNPDVSMRVIKSFLYQLINGVNFCH-SR 151
Query: 193 GVCHRDIKPQNLLVN----PHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELI 245
HRD+KPQNLL++ T +K+ DFG A+ G P + I + +YR PE++
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPEIL 209
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN--P 303
G+ Y+T++DIWS C+ AE+++ PLFPGDS +DQL +I +VLG P + P
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
++ + FP+ + ++ + E +DL++ +L+ P R +A +AL HP+F
Sbjct: 270 DWKQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 140
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 141 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 199 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 258 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 316
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 317 LQHPYINVWYDP 328
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 162/307 (52%), Gaps = 31/307 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M++++H N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + +V+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLVGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + + K+FP + P +A DL+S++L + R + +AL HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 358 DELRDPN 364
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLL-----YQMLCGI 177
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 178 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 236 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 295 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 354 LQHPYINVWYDP 365
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 138
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 139 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 196
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 197 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 255
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 256 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 314
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 315 LQHPYINVWYDP 326
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 257 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 316 LQHPYINVWYDP 327
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 140
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 141 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 199 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 258 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 316
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 317 LQHPYINVWYDP 328
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 177
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 178 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 236 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 295 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 354 LQHPYINVWYDP 365
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 257 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 316 LQHPYINVWYDP 327
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 132
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 133 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 191 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 250 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 309 LQHPYINVWYDP 320
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 133
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 134 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 192 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 251 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 309
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 310 LQHPYINVWYDP 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V++ ++RM + YQ+ +
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 133
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 134 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 192 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P+ + K+FP + P +A DL+S++L P R + DA
Sbjct: 251 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 309
Query: 352 LIHPFFDELRDP 363
L HP+ + DP
Sbjct: 310 LQHPYINVWYDP 321
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 164/314 (52%), Gaps = 35/314 (11%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A G VA+KK+ Q++ + R EL ++ ++H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V+ H ++RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYLL-----YQMLCGI 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI 197
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 198 LGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 304 -NYTEF--KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTAL 349
NY E K+P IK + ++FP + P +A DL+S++L P+ R +
Sbjct: 257 RNYVENRPKYPGIK---FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 313
Query: 350 DALIHPFFDELRDP 363
+AL HP+ DP
Sbjct: 314 EALRHPYITVWYDP 327
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 162/307 (52%), Gaps = 31/307 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M++++H N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + +V+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLCGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + + K+FP + P +A DL+S++L + R + +AL HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 358 DELRDPN 364
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 161/307 (52%), Gaps = 31/307 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + +V+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYLL-----YQMLCGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + + K+FP + P +A DL+S++L + R + +AL HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 358 DELRDPN 364
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 31/312 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A G VA+KK+ Q++ + R EL ++ ++H N+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+SL + F +E + LV+E + + +V+ H ++RM + YQ+ +
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYLL-----YQMLCGI 137
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 138 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI 195
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 196 LGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 254
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
NY E + P + ++FP + P +A DL+S++L P+ R + +A
Sbjct: 255 RNYVENR-PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 352 LIHPFFDELRDP 363
L HP+ DP
Sbjct: 314 LRHPYITVWYDP 325
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 161/307 (52%), Gaps = 31/307 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M++++H N++ L +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + +V+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLVGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS G ++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + + K+FP + P +A DL+S++L + R + +AL HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 358 DELRDPN 364
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 31/301 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N++SL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + LV+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + K+FP + P +A DL+S++L P R + DAL HP+
Sbjct: 263 R-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
Query: 358 D 358
+
Sbjct: 322 N 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 31/313 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ L + F +E + +V+E + + +V++ ++RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
Y E + P+ + + K+FP + P +A DL+S++L + R + +A
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 352 LIHPFFDELRDPN 364
L HP+ + DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 161/307 (52%), Gaps = 31/307 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M++++H N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + +V+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLVGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS G ++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + + K+FP + P +A DL+S++L + R + +AL HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 358 DELRDPN 364
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 31/313 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ L + F +E + +V+E + + +V++ ++RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
Y E + P+ + + K+FP + P +A DL+S++L + R + +A
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 352 LIHPFFDELRDPN 364
L HP+ + DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 152/299 (50%), Gaps = 25/299 (8%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-NRELQTMR-LLDHPNVVSL 129
Y R +G+G + VF+A + E V +K + K+ K RE++ + L PN+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL 97
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+ LV E+V T F +L Q + ++ Y Y+I +AL Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 249
S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 250 EYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKCMN 302
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+ ++
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LD 266
Query: 303 PNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
P + + + W + + PEA+D + +LL+Y R TA +A+ HP+F
Sbjct: 267 PRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 163/313 (52%), Gaps = 31/313 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ L + F +E + +V+E + + +V++ ++RM + YQ+ +
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYLL-----YQMLCGI 141
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ + ++ +RYYRAPE+I
Sbjct: 142 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVI 199
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 200 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 258
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
Y E + P+ + + K+FP + P +A DL+S++L + R + +A
Sbjct: 259 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 317
Query: 352 LIHPFFDELRDPN 364
L HP+ + DP+
Sbjct: 318 LQHPYINVWYDPS 330
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ L + F +E + +V+E + + +V++ ++RM + YQ+ +
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 140
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 141 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 199 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
Y E + P+ + + K+FP + P +A DL+S++L + R + +A
Sbjct: 258 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316
Query: 352 LIHPFFDELRDPN 364
L HP+ + DP+
Sbjct: 317 LQHPYINVWYDPS 329
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ L + F +E + +V+E + + +V++ ++RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
Y E + P+ + + K+FP + P +A DL+S++L + R + +A
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 352 LIHPFFDELRDPN 364
L HP+ + DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ L + F +E + +V+E + + +V++ ++RM + YQ+ +
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 144
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 145 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 202
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +D+WS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 203 LGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 261
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
Y E + P+ + + K+FP + P +A DL+S++L + R + +A
Sbjct: 262 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 320
Query: 352 LIHPFFDELRDPN 364
L HP+ + DP+
Sbjct: 321 LQHPYINVWYDPS 333
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ L + F +E + +V+E + + +V++ ++RM + YQ+ +
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 133
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 134 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +D+WS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 192 LGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
Y E + P+ + + K+FP + P +A DL+S++L + R + +A
Sbjct: 251 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 309
Query: 352 LIHPFFDELRDPN 364
L HP+ + DP+
Sbjct: 310 LQHPYINVWYDPS 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 161/313 (51%), Gaps = 31/313 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 126
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 127 VSLKHCFFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ L + F +E + +V+E + + +V++ ++RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYLL-----YQMLCGI 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
++H S G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I
Sbjct: 140 KHLH-SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVI 197
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP-- 303
G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 304 -NYTEFKFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDA 351
Y E + P+ + + K+FP + P +A DL+S++L + R + +A
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEA 315
Query: 352 LIHPFFDELRDPN 364
L HP+ + DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 47 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 107 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 157
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 158 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 216
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 217 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 270
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 271 AYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 330
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 331 LEAMTHPYFQQVR 343
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L+
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGG 85
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 136
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 87/360 (24%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPN 125
+Y+ + ++G+GS+G V+ A T + VAIKKV L D + RE+ + L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 126 VVSLKHCFF--STTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
++ L DELY+ VLE + ++ K L + ++K Y +
Sbjct: 87 IIRLYDLIIPDDLLKFDELYI--VLEIADSDLKKLFKTPIFLTEE----HIKTILYNLLL 140
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNI----------- 231
++IH S G+ HRD+KP N L+N VK+CDFG A+ + + + NI
Sbjct: 141 GENFIHES-GIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 232 -----------SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAEL--MLGK------- 271
S++ +R+YRAPELI YT +IDIWS GC+ AEL ML
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 272 --PLFPGD-----------------SGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 312
PLFPG S DQL I ++GTPT +++K +N P+
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINK-------PE 311
Query: 313 IKAHPWHKIFPKRMP-----------PEAVDLVSRLLQYSPNLRCTALDALIHPFFDELR 361
+ + K+FP R P + ++L+ +L+++PN R T AL HP+ ++R
Sbjct: 312 VIK--YIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR 369
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 136
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 27 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 87 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 137
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 138 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 250
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 311 LEAMTHPYFQQVR 323
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 136
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 136
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 156/311 (50%), Gaps = 29/311 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E VA+K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N+L++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 FDELRDPNARL 367
F + AR+
Sbjct: 324 FYTVVKDQARM 334
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 28 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 88 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 138
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 139 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 197
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 198 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 251
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 252 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 311
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 312 LEAMTHPYFQQVR 324
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 27 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 87 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 137
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 138 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 250
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 311 LEAMTHPYFQQVR 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 136
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 123
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
PN+V L D+ +L+ EYV T F L + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNT------DFKVLYPTLTDYDIRYYIYELLK 136
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
AL Y H S G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCH-SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
L+ +Y ++D+WS GC+ A ++ K P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 303 PNYTEFKF---PQIKA-------HPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTA 348
+++ PQ++A PW K + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 349 LDALIHPFFDELR 361
L+A+ HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 159/307 (51%), Gaps = 31/307 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + +V+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+DIWS GC++ E++ K LFPG +DQ ++I+ LGTP +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + + K+FP + P +A DL+S++L + R + +AL HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 358 DELRDPN 364
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 161/367 (43%), Gaps = 95/367 (25%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQ------DKRYKNRELQTMRLLDHPNV 126
Y ++G GS+G V +A VAIKK+L+ D + RE+ + L+H +V
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 127 VSLKHCFF--STTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
V + DELY+ VLE ++ + L + +++K Y +
Sbjct: 115 VKVLDIVIPKDVEKFDELYV--VLEIADSDFKKLFRTPVYLTE----LHIKTLLYNLLVG 168
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS------------ 232
+ Y+H S G+ HRD+KP N LVN VK+CDFG A+ + E S
Sbjct: 169 VKYVH-SAGILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 233 ----------------YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAEL--MLGK--- 271
++ +R+YRAPELI YT AID+WS GC+ AEL M+ +
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
Query: 272 ------PLFPGDS--------------------GVDQLVEIIKVLGTPTREEIKCMNPNY 305
PLFPG S DQL I +LGTP+ E+I+ +
Sbjct: 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKE- 345
Query: 306 TEFKFPQIKAHPWHKIFPKR-----------MPPEAVDLVSRLLQYSPNLRCTALDALIH 354
A + +IFPKR +A+ L+ R+L ++PN R T + L H
Sbjct: 346 --------DAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397
Query: 355 PFFDELR 361
PFF E+R
Sbjct: 398 PFFKEVR 404
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 147/289 (50%), Gaps = 18/289 (6%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLD---HPNVVSL 129
+G G++G V++A+ +G VA+K V + RE+ +R L+ HPNVV L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 130 KH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
C S TD+ E+ + LV E+V + + + +P +K Q R L ++
Sbjct: 72 MDVCATSRTDR-EIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFL 128
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H + + HRD+KP+N+LV VKL DFG A++ + + +YRAPE++ +
Sbjct: 129 HANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQS 186
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
T Y T +D+WS GC+ AE+ KPLF G+S DQL +I ++G P ++ + +
Sbjct: 187 T-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSLPRG 244
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
FP P + P+ M L+ +L ++P+ R +A AL H +
Sbjct: 245 AFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 147/289 (50%), Gaps = 18/289 (6%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLD---HPNVVSL 129
+G G++G V++A+ +G VA+K V + RE+ +R L+ HPNVV L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 130 KH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
C S TD+ E+ + LV E+V + + + +P +K Q R L ++
Sbjct: 72 MDVCATSRTDR-EIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFL 128
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H + + HRD+KP+N+LV VKL DFG A++ + + +YRAPE++ +
Sbjct: 129 HANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQS 186
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
T Y T +D+WS GC+ AE+ KPLF G+S DQL +I ++G P ++ + +
Sbjct: 187 T-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSLPRG 244
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
FP P + P+ M L+ +L ++P+ R +A AL H +
Sbjct: 245 AFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 159/307 (51%), Gaps = 31/307 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 132
+G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 133 FFSTTDKDELY-LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F +E + +V+E + + +V++ ++RM + YQ+ + ++H S
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGIKHLH-S 144
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I G Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-Y 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 308
+D+WS GC++ E++ K LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 309 KFPQIKAHPWHKIFPKRMPP-----------EAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ P+ + + K+FP + P +A DL+S++L + R + +AL HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 358 DELRDPN 364
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 147/289 (50%), Gaps = 18/289 (6%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLD---HPNVVSL 129
+G G++G V++A+ +G VA+K V + RE+ +R L+ HPNVV L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 130 KH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
C S TD+ E+ + LV E+V + + + +P +K Q R L ++
Sbjct: 72 MDVCATSRTDR-EIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFL 128
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H + + HRD+KP+N+LV VKL DFG A++ + + +YRAPE++ +
Sbjct: 129 HANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQS 186
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
T Y T +D+WS GC+ AE+ KPLF G+S DQL +I ++G P ++ + +
Sbjct: 187 T-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSLPRG 244
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
FP P + P+ M L+ +L ++P+ R +A AL H +
Sbjct: 245 AFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 29/296 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------------RELQTMRLLD--- 122
+G G++G V++A+ +G VA+K V R N RE+ +R L+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 123 HPNVVSLKH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
HPNVV L C S TD+ E+ + LV E+V + + + +P +K Q
Sbjct: 73 HPNVVRLMDVCATSRTDR-EIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQF 129
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
R L ++H + + HRD+KP+N+LV VKL DFG A++ + + +YRA
Sbjct: 130 LRGLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYRA 187
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE++ +T Y T +D+WS GC+ AE+ KPLF G+S DQL +I ++G P ++
Sbjct: 188 PEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-R 245
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+ + FP P + P+ M L+ +L ++P+ R +A AL H +
Sbjct: 246 DVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 156/313 (49%), Gaps = 29/313 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 FDELRDPNARLPS 369
F + AR+ S
Sbjct: 324 FYTVVKDQARMGS 336
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 156/314 (49%), Gaps = 29/314 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 FDELRDPNARLPSG 370
F + AR+ S
Sbjct: 324 FYTVVKDQARMGSS 337
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLRQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 FDELRDPNARL 367
F + AR+
Sbjct: 324 FYTVVKDQARM 334
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 43 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 100
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 101 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 151
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 152 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 210
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 211 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 269
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 270 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 328
Query: 357 FDELRDPNARL 367
F + AR+
Sbjct: 329 FYTVVKDQARM 339
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 FDELRDPNARL 367
F + AR+
Sbjct: 324 FYTVVKDQARM 334
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 94
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 95 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 145
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 146 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 204
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 205 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 263
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 264 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322
Query: 357 FDELRDPNARL 367
F + AR+
Sbjct: 323 FYTVVKDQARM 333
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 FDELRDPNARL 367
F + AR+
Sbjct: 324 FYTVVKDQARM 334
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 FDELRDPNARL 367
F + AR+
Sbjct: 324 FYTVVKDQARM 334
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 168/333 (50%), Gaps = 53/333 (15%)
Query: 67 PKQTISYMAE--RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDH- 123
P ++Y E +++G+GSFG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 124 -----PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
N +++ H + T ++ ++ + E + ++ ++K NK Q + V+ +A
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKK-NKF-QGFSLPLVRKFA 206
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSR 237
+ I + L +H++ + H D+KP+N+L+ +K+ DFGS+ + + + I SR
Sbjct: 207 HSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR 263
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
+YRAPE+I GA Y ID+WS GC++AEL+ G PL PG+ DQL +I++LG P++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ-- 320
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPK------------------RMPPEA--------- 330
K ++ + F K +P + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 331 ------VDLVSRLLQYSPNLRCTALDALIHPFF 357
+D + + L++ P +R T AL HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 169/333 (50%), Gaps = 53/333 (15%)
Query: 67 PKQTISYMAE--RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDH- 123
P ++Y E +++G+GSFG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 124 -----PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
N +++ H + T ++ ++ + E + ++ ++K NK Q + V+ +A
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKK-NKF-QGFSLPLVRKFA 206
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSR 237
+ I + L +H++ + H D+KP+N+L+ +K+ DFGS+ + + + I SR
Sbjct: 207 HSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR 263
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
+YRAPE+I GA Y ID+WS GC++AEL+ G PL PG+ DQL +I++LG P++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ-- 320
Query: 298 IKCMNPNYTEFKFPQIKAHPWH------------------KIFPKRMPPEA--------- 330
K ++ + F K +P + + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 331 ------VDLVSRLLQYSPNLRCTALDALIHPFF 357
+D + + L++ P +R T AL HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 163/367 (44%), Gaps = 92/367 (25%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPN 125
+Y + ++G+GS+G V+ A + VAIKKV L D + RE+ + L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 126 VVSLKHCFF--STTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
++ L DELY+ VLE + ++ K L ++ +VK Y +
Sbjct: 89 IIRLHDLIIPEDLLKFDELYI--VLEIADSDLKKLFKTPIFLTEQ----HVKTILYNLLL 142
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI------------ 231
+IH S G+ HRD+KP N L+N VK+CDFG A+ + + +I
Sbjct: 143 GEKFIHES-GIIHRDLKPANCLLNQDC-SVKICDFGLART-INSDKDIHIVNDLEEKEEN 199
Query: 232 ---------------SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGK---- 271
S++ +R+YRAPELI YT +IDIWS GC+ AEL+ + K
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHIN 259
Query: 272 ------PLFPGD-----------------SGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
PLFPG S DQL I V+GTP E++KC+
Sbjct: 260 NPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCIT------ 313
Query: 309 KFPQIKAHPWHKIFPKR-----------MPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
K IK + K+FP R + E +DL+ +L+++ R T AL HP+
Sbjct: 314 KQEVIK---YIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYL 370
Query: 358 DELRDPN 364
++R N
Sbjct: 371 KDVRKEN 377
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 29/301 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 93
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 94 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 144
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 145 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 203
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 204 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 262
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 263 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321
Query: 357 F 357
F
Sbjct: 322 F 322
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 29/301 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 F 357
F
Sbjct: 324 F 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 29/301 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 94
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 95 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 145
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 146 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 204
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 205 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 263
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 264 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322
Query: 357 F 357
F
Sbjct: 323 F 323
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 29/301 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 F 357
F
Sbjct: 324 F 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 29/301 (9%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 127
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+L + LV E+V T F +L Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H S+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 248 ATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTP------TREEIKC 300
Y ++D+WS GC++A ++ K P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++P + + + W + + PEA+D + +LL+Y R TA +A+ HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 357 F 357
F
Sbjct: 324 F 324
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 24/225 (10%)
Query: 146 LVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLL 205
LV EY+ T F +L Q + ++ Y Y++ +AL Y H S G+ HRD+KP N++
Sbjct: 117 LVFEYINNT------DFKQLYQILTDFDIRFYMYELLKALDYCH-SKGIMHRDVKPHNVM 169
Query: 206 VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVA 265
++ +++L D+G A+ + + SRY++ PEL+ Y ++D+WS GC++A
Sbjct: 170 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 229
Query: 266 ELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAH 316
++ + P F G DQLV I KVLGT EE+ ++P++ + Q
Sbjct: 230 SMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRK 285
Query: 317 PWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
W + PEA+DL+ +LL+Y R TA +A+ HP+F
Sbjct: 286 RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 24/225 (10%)
Query: 146 LVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLL 205
LV EY+ T F +L Q + ++ Y Y++ +AL Y H S G+ HRD+KP N++
Sbjct: 112 LVFEYINNT------DFKQLYQILTDFDIRFYMYELLKALDYCH-SKGIMHRDVKPHNVM 164
Query: 206 VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVA 265
++ +++L D+G A+ + + SRY++ PEL+ Y ++D+WS GC++A
Sbjct: 165 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 224
Query: 266 ELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAH 316
++ + P F G DQLV I KVLGT EE+ ++P++ + Q
Sbjct: 225 SMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRK 280
Query: 317 PWHKIFPKR----MPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
W + PEA+DL+ +LL+Y R TA +A+ HP+F
Sbjct: 281 RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 151/299 (50%), Gaps = 28/299 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 133 FFSTTD-----KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+ K +YL V ++ H + + + + + +K + L Y
Sbjct: 86 CRTKASPYNRCKGSIYL--VFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 242
IHR+ + HRD+K N+L+ +KL DFG A+ +PN + + + +YR P
Sbjct: 141 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
EL+ G +Y ID+W AGC++AE+ P+ G++ QL I ++ G+ T E ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMP----PEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
NY ++ ++ K+ + P A+DL+ +LL P R + DAL H FF
Sbjct: 259 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 154/297 (51%), Gaps = 24/297 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSL-KH 131
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 132 CFFSTT--DKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
C + ++ + + LV ++ H + + + + + +K + L YIH
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAPEL 244
R+ + HRD+K N+L+ +KL DFG A+ +PN + + + +YR PEL
Sbjct: 143 RN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ G +Y ID+W AGC++AE+ P+ G++ QL I ++ G+ T E ++ N
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-N 259
Query: 305 YTEFKFPQIKAHPWHKIFPKRMP----PEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
Y ++ ++ K+ + P A+DL+ +LL P R + DAL H FF
Sbjct: 260 YELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 151/299 (50%), Gaps = 28/299 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 133 FFSTTD-----KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+ K +YL V ++ H + + + + + +K + L Y
Sbjct: 86 CRTKASPYNRCKGSIYL--VFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 242
IHR+ + HRD+K N+L+ +KL DFG A+ +PN + + + +YR P
Sbjct: 141 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
EL+ G +Y ID+W AGC++AE+ P+ G++ QL I ++ G+ T E ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMP----PEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
NY ++ ++ K+ + P A+DL+ +LL P R + DAL H FF
Sbjct: 259 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 151/299 (50%), Gaps = 28/299 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 132
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 133 FFSTTD-----KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+ K +YL V ++ H + + + + + +K + L Y
Sbjct: 85 CRTKASPYNRCKGSIYL--VFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 242
IHR+ + HRD+K N+L+ +KL DFG A+ +PN + + + +YR P
Sbjct: 140 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
EL+ G +Y ID+W AGC++AE+ P+ G++ QL I ++ G+ T E ++
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMP----PEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
NY ++ ++ K+ + P A+DL+ +LL P R + DAL H FF
Sbjct: 258 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 166/333 (49%), Gaps = 53/333 (15%)
Query: 67 PKQTISYMAE--RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDH- 123
P ++Y E +++G+G FG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 124 -----PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
N +++ H + T ++ ++ + E + ++ ++K NK Q + V+ +A
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKK-NKF-QGFSLPLVRKFA 206
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSR 237
+ I + L +H++ + H D+KP+N+L+ +K+ DFGS+ + + I SR
Sbjct: 207 HSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSR 263
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
+YRAPE+I GA Y ID+WS GC++AEL+ G PL PG+ DQL +I++LG P +
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ-- 320
Query: 298 IKCMNPNYTEFKFPQIKAHPWH------------------KIFPKRMPPEA--------- 330
K ++ + F K +P + + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 331 ------VDLVSRLLQYSPNLRCTALDALIHPFF 357
+D + + L++ P +R T AL HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 141/284 (49%), Gaps = 42/284 (14%)
Query: 113 RELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHF-----NKLNQ 167
RE+ +R L HPNV+SL+ F S D+ + L+ +Y + ++K NK
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPV 123
Query: 168 RMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVL 224
++P VK YQI + Y+H + V HRD+KP N+LV P +VK+ D G A++
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 225 ---VKGEPNIS-YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLF------ 274
+K ++ + + +YRAPEL+ GA YT AIDIW+ GC+ AEL+ +P+F
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
Query: 275 ---PGDSGVDQLVEIIKVLGTPTR---EEIKCMNPNYTEFK-FPQ--------IKAHPWH 319
DQL I V+G P E+IK M + T K F + IK H
Sbjct: 243 IKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKH 302
Query: 320 KIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
K+ P +A L+ +LL P R T+ A+ P+F L DP
Sbjct: 303 KVKPDS---KAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDP 341
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 49/357 (13%)
Query: 65 GQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHP 124
G+P + Y+ R +G G F V+ AK + VA+K V DK Y ++LL
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 125 N--------VVSLKHCF-----FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
N + H F+ + +++ +V E + E + ++K + ++ +P+
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPL 130
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVN-----PHTHQVKLCDFGSAKVLVK 226
IYVK + Q+ L Y+HR G+ H DIKP+N+L+ + Q+K+ D G+A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWY 188
Query: 227 GEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSG------V 280
E + I +R YR+PE++ GA + DIWS C++ EL+ G LF D G
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
Query: 281 DQLVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FPKRMP 327
D + +II++LG T T + + N ++ KF ++ K F K
Sbjct: 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 328 PEAVDLVSRLLQYSPNLRCTALDALIHPFF------DELRDPNARL-PSGRFLPPLF 377
E D +S +LQ P R A + HP+ +E+R P+ L SG +P F
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 49/357 (13%)
Query: 65 GQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHP 124
G+P + Y+ R +G G F V+ AK + VA+K V DK Y ++LL
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 125 N--------VVSLKHCF-----FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
N + H F+ + +++ +V E + E + ++K + ++ +P+
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPL 130
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVN-----PHTHQVKLCDFGSAKVLVK 226
IYVK + Q+ L Y+HR G+ H DIKP+N+L+ + Q+K+ D G+A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWY 188
Query: 227 GEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSG------V 280
E + I +R YR+PE++ GA + DIWS C++ EL+ G LF D G
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
Query: 281 DQLVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FPKRMP 327
D + +II++LG T T + + N ++ KF ++ K F K
Sbjct: 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 328 PEAVDLVSRLLQYSPNLRCTALDALIHPFF------DELRDPNARL-PSGRFLPPLF 377
E D +S +LQ P R A + HP+ +E+R P+ L SG +P F
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 161/348 (46%), Gaps = 61/348 (17%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 122
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 28 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 123 HPN---------VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY 173
N +V LK F +L LV E + ++ ++++ N + + +
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRNTN--FRGVSLNL 139
Query: 174 VKLYAYQIFRALSYIHR-SIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ +A Q+ AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 140 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIY 197
Query: 232 SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLG 291
I SR+YR+PE++ G Y AID+WS GC++ E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 198 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 256
Query: 292 TPTREEIKCMNPNYTEFKFPQIKAHPW--------------------HKIF-------PK 324
P I P +F F ++ W H I
Sbjct: 257 IPP-AHILDQAPKARKF-FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGG 314
Query: 325 RMPPEA----------VDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
R E+ DL+ R+L Y P R AL H FF + D
Sbjct: 315 RRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 362
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 161/348 (46%), Gaps = 61/348 (17%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 122
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 123 HPN---------VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY 173
N +V LK F +L LV E + ++ ++++ N + + +
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRNTN--FRGVSLNL 158
Query: 174 VKLYAYQIFRALSYIHR-SIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ +A Q+ AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIY 216
Query: 232 SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLG 291
I SR+YR+PE++ G Y AID+WS GC++ E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 217 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 275
Query: 292 TPTREEIKCMNPNYTEFKFPQIKAHPW--------------------HKIF-------PK 324
P I P +F F ++ W H I
Sbjct: 276 IPP-AHILDQAPKARKF-FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGG 333
Query: 325 RMPPEA----------VDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
R E+ DL+ R+L Y P R AL H FF + D
Sbjct: 334 RRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 161/348 (46%), Gaps = 61/348 (17%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 122
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 123 HPN---------VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY 173
N +V LK F +L LV E + ++ ++++ N + + +
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRNTN--FRGVSLNL 158
Query: 174 VKLYAYQIFRALSYIHR-SIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ +A Q+ AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIY 216
Query: 232 SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLG 291
I SR+YR+PE++ G Y AID+WS GC++ E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 217 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 275
Query: 292 TPTREEIKCMNPNYTEFKFPQIKAHPW--------------------HKIF-------PK 324
P I P +F F ++ W H I
Sbjct: 276 IPP-AHILDQAPKARKF-FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGG 333
Query: 325 RMPPEA----------VDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
R E+ DL+ R+L Y P R AL H FF + D
Sbjct: 334 RRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 49/295 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK-------KVLQDKRYKNRELQTMRLLDHPN 125
Y +R++G+GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKL--NQRMPMIYVKLYAYQIFR 183
++ L F +D+ Y LV E V+ + F+++ +R + Q+
Sbjct: 111 IMKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
++Y+H++ + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 161 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 219
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE++ G Y D+WS G ++ L+ G P F G + D L ++ K
Sbjct: 220 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 264
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
YT F+ PQ W K++ A DL+ ++L Y P++R +A DAL H +
Sbjct: 265 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 307
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 49/295 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK-------KVLQDKRYKNRELQTMRLLDHPN 125
Y +R++G+GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKL--NQRMPMIYVKLYAYQIFR 183
++ L F +D+ Y LV E V+ + F+++ +R + Q+
Sbjct: 112 IMKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 161
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
++Y+H++ + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 162 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 220
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE++ G Y D+WS G ++ L+ G P F G + D L ++ K
Sbjct: 221 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 265
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
YT F+ PQ W K++ A DL+ ++L Y P++R +A DAL H +
Sbjct: 266 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 308
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 49/295 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK-------KVLQDKRYKNRELQTMRLLDHPN 125
Y +R++G+GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKL--NQRMPMIYVKLYAYQIFR 183
++ L F +D+ Y LV E V+ + F+++ +R + Q+
Sbjct: 88 IMKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
++Y+H++ + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 138 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 196
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE++ G Y D+WS G ++ L+ G P F G + D L ++ K
Sbjct: 197 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 241
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
YT F+ PQ W K++ A DL+ ++L Y P++R +A DAL H +
Sbjct: 242 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 49/295 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK-------KVLQDKRYKNRELQTMRLLDHPN 125
Y +R++G+GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKL--NQRMPMIYVKLYAYQIFR 183
++ L F +D+ Y LV E V+ + F+++ +R + Q+
Sbjct: 94 IMKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 143
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
++Y+H++ + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 144 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 202
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE++ G Y D+WS G ++ L+ G P F G + D L ++ K
Sbjct: 203 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 247
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
YT F+ PQ W K++ A DL+ ++L Y P++R +A DAL H +
Sbjct: 248 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 49/295 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK-------KVLQDKRYKNRELQTMRLLDHPN 125
Y +R++G+GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKL--NQRMPMIYVKLYAYQIFR 183
+ L F +D+ Y LV E V+ + F+++ +R + Q+
Sbjct: 88 IXKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
++Y H++ + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 138 GITYXHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIA 196
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE++ G Y D+WS G ++ L+ G P F G + D L ++ K
Sbjct: 197 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 241
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
YT F+ PQ W K++ A DL+ + L Y P+ R +A DAL H +
Sbjct: 242 -GKYT-FELPQ-----W-----KKVSESAKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 147/311 (47%), Gaps = 70/311 (22%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 130 KHCFFSTTDKDELYLNL-------VLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+F+ D ++LY L +L+Y+ R + F++ R Y +I
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGCLLKYI-----RKIGSFDETCTR-------FYTAEIV 142
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYY 239
AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y
Sbjct: 143 SALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 240 RAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIK 299
+PEL+ + ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 201 VSPELLTEKSASKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---------- 249
Query: 300 CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----I 353
E+ FP+ K FPK A DLV +L L + L C ++
Sbjct: 250 -------EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKA 290
Query: 354 HPFFDELRDPN 364
HPFF+ + N
Sbjct: 291 HPFFESVTWEN 301
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 99 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 150
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+
Sbjct: 151 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 209 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 250
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 251 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
Query: 361 RDPN 364
N
Sbjct: 299 TWEN 302
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 58/305 (19%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLF-PGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ ++ D+W+ GC++ +L+ G P F G+ G+ +IIK+
Sbjct: 208 EKSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKL---------------- 249
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDE 359
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+
Sbjct: 250 -EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296
Query: 360 LRDPN 364
+ N
Sbjct: 297 VTWEN 301
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
CF D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 103 YFCF---QDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 154
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 155 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 213 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 254
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 255 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 302
Query: 361 RDPN 364
N
Sbjct: 303 TWEN 306
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 95 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 146
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+
Sbjct: 147 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 205 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 246
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 247 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
Query: 361 RDPN 364
N
Sbjct: 295 TWEN 298
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 144/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 147
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K +++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 247
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 248 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 361 RDPN 364
N
Sbjct: 296 TWEN 299
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 58/305 (19%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLF-PGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ ++ D+W+ GC++ +L+ G P F G+ G+ +IIK+
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKL---------------- 249
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDE 359
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+
Sbjct: 250 -EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296
Query: 360 LRDPN 364
+ N
Sbjct: 297 VTWEN 301
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 99 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 150
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 151 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 209 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 250
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 251 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
Query: 361 RDPN 364
N
Sbjct: 299 TWEN 302
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 249
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 250 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 361 RDPN 364
N
Sbjct: 298 TWEN 301
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 147
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 247
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 248 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 361 RDPN 364
N
Sbjct: 296 TWEN 299
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 249
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 250 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 361 RDPN 364
N
Sbjct: 298 TWEN 301
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 147
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 247
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 248 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 361 RDPN 364
N
Sbjct: 296 TWEN 299
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 249
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 250 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 361 RDPN 364
N
Sbjct: 298 TWEN 301
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 73 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 124
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 125 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 183 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 224
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 225 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
Query: 361 RDPN 364
N
Sbjct: 273 TWEN 276
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 75 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 126
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 127 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 185 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 226
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 227 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 274
Query: 361 RDPN 364
N
Sbjct: 275 TWEN 278
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 80 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 131
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 132 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 190 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 231
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 232 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
Query: 361 RDPN 364
N
Sbjct: 280 TWEN 283
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 146/311 (46%), Gaps = 70/311 (22%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 130 KHCFFSTTDKDELYLNL-------VLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+F+ D ++LY L +L+Y+ R + F++ R Y +I
Sbjct: 95 ---YFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTR-------FYTAEIV 139
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYY 239
AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y
Sbjct: 140 SALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 240 RAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIK 299
+PEL+ + ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 198 VSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---------- 246
Query: 300 CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----I 353
E+ FP+ K FPK A DLV +L L + L C ++
Sbjct: 247 -------EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKA 287
Query: 354 HPFFDELRDPN 364
HPFF+ + N
Sbjct: 288 HPFFESVTWEN 298
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 74 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 125
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 126 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 184 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 225
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 226 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273
Query: 361 RDPN 364
N
Sbjct: 274 TWEN 277
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 146/311 (46%), Gaps = 70/311 (22%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 130 KHCFFSTTDKDELYLNL-------VLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+F+ D ++LY L +L+Y+ R + F++ R Y +I
Sbjct: 76 ---YFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTR-------FYTAEIV 120
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYY 239
AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y
Sbjct: 121 SALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 240 RAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIK 299
+PEL+ + ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 179 VSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---------- 227
Query: 300 CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----I 353
E+ FP+ K FPK A DLV +L L + L C ++
Sbjct: 228 -------EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKA 268
Query: 354 HPFFDELRDPN 364
HPFF+ + N
Sbjct: 269 HPFFESVTWEN 279
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 147
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 247
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP+ K FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 248 EYDFPE-------KFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 361 RDPN 364
N
Sbjct: 296 TWEN 299
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 49/308 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 130
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F D Y+ L E ++K + ++ +K Q+F ++Y+H+
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIK----QVFSGITYMHK 139
Query: 191 SIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
Y D+WSAG ++ L+ G P F G + D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP 368
PQ W I +A DL+ ++L + P+LR TA L HP+ ++ ++ P
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW---IQKYSSETP 288
Query: 369 SGRFLPPL 376
+ LP L
Sbjct: 289 TISDLPSL 296
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 56/304 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 129
+I+G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+F+ D ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 101 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 152
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 246
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 153 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ ++ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 211 EKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL----------------- 252
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL--LQYSPNLRCTALDAL----IHPFFDEL 360
E+ FP FPK A DLV +L L + L C ++ HPFF+ +
Sbjct: 253 EYDFPA-------AFFPK-----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300
Query: 361 RDPN 364
N
Sbjct: 301 TWEN 304
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 130
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F D Y+ L E ++K + ++ +K Q+F ++Y+H+
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIK----QVFSGITYMHK 139
Query: 191 SIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
Y D+WSAG ++ L+ G P F G + D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
PQ W I +A DL+ ++L + P+LR TA L HP+
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 38/286 (13%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQ-DKRYK---NRELQTMRLLDHPNVVSLKHCF 133
++G+G++G+V+ + L +AIK++ + D RY + E+ + L H N+V F
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ ++ + +E VP + + + Y QI L Y+H +
Sbjct: 89 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-Q 142
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYICSRYYRAPELI-FGATEY 251
+ HRDIK N+L+N ++ +K+ DFG++K L P ++ + Y APE+I G Y
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 311
A DIWS GC + E+ GKP F + P FK
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPF-----------------------YELGEPQAAMFKVG 239
Query: 312 QIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
K HP P+ M EA + + + P+ R A D L+ F
Sbjct: 240 MFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 130
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F D Y+ L E ++K + ++ +K Q+F ++Y+H+
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIK----QVFSGITYMHK 139
Query: 191 SIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
Y D+WSAG ++ L+ G P F G + D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
PQ W I +A DL+ ++L + P+LR TA L HP+
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 38/286 (13%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQ-DKRYK---NRELQTMRLLDHPNVVSLKHCF 133
++G+G++G+V+ + L +AIK++ + D RY + E+ + L H N+V F
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+ ++ + +E VP + + + Y QI L Y+H +
Sbjct: 75 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-Q 128
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYICSRYYRAPELI-FGATEY 251
+ HRDIK N+L+N ++ +K+ DFG++K L P ++ + Y APE+I G Y
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 311
A DIWS GC + E+ GKP F + P FK
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPF-----------------------YELGEPQAAMFKVG 225
Query: 312 QIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
K HP P+ M EA + + + P+ R A D L+ F
Sbjct: 226 MFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F +T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 74 YGYFHDSTR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 H-SKKVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ D I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-----------------EF 223
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKV----LQDKRYKN---RELQTMRLLDHP 124
++ E+ +G+G F V++A CL G VA+KKV L D + + +E+ ++ L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
NV+ F + LN+VLE + R++KHF K + +P V Y Q+
Sbjct: 93 NVIKYYASFIEDNE-----LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNISYICSRYYRAP 242
AL ++H S V HRDIKP N+ + T VKL D G + K S + + YY +P
Sbjct: 148 ALEHMH-SRRVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGD 277
E I Y DIWS GC++ E+ + F GD
Sbjct: 206 ERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 91 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 141
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 142 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 199 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 240
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 241 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 150
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 151 H-SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 208 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 249
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 250 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 130 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 128
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 129 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 227
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 73 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 123
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 124 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 181 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 222
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 223 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 56/306 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 119
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 69
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
L+HP ++ +K+ F D ++ Y+ L L E +VV N+R+ KLY Y
Sbjct: 70 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 120
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 236
Q+ A+ Y+H + G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 121 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 177
Query: 237 R-YYRAPELIF--GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
Y APE++ G Y A+D WS G ++ + G P F L
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 227
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+++I N+ P++ W ++ K A+DLV +LL P R T +AL
Sbjct: 228 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 273
Query: 354 HPFFDE 359
HP+ +
Sbjct: 274 HPWLQD 279
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 42/293 (14%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV----LQDKRYKNRELQTMRLLDHPNVVS 128
Y E +G+GS+G V A T A KK+ ++D +E++ M+ LDHPN++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L F TD +YL + L E RVV H + +K + A++Y
Sbjct: 71 LYETFEDNTD---IYLVMELCTGGELFERVV-HKRVFRESDAARIMK----DVLSAVAYC 122
Query: 189 HRSIGVCHRDIKPQNLL--VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H+ + V HRD+KP+N L + +KL DFG A G+ + + + YY +P+++
Sbjct: 123 HK-LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G Y D WSAG ++ L+ G P F + + +++I + GT
Sbjct: 182 GL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT-------------- 223
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
F FP+ W + P+A L+ RLL SP R T+L AL H +F++
Sbjct: 224 -FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 56/306 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 119
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
L+HP ++ +K+ F D ++ Y+ L L E +VV N+R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 121
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 236
Q+ A+ Y+H + G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 237 R-YYRAPELIF--GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
Y APE++ G Y A+D WS G ++ + G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+++I N+ P++ W ++ K A+DLV +LL P R T +AL
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 354 HPFFDE 359
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 130 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 126 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 183 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 224
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 225 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 56/306 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 119
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
L+HP ++ +K+ F D ++ Y+ L L E +VV N+R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 121
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 236
Q+ A+ Y+H + G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 237 R-YYRAPELIF--GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
Y APE++ G Y A+D WS G ++ + G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+++I N+ P++ W ++ K A+DLV +LL P R T +AL
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 354 HPFFDE 359
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 56/306 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 119
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 76
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
L+HP ++ +K+ F D ++ Y+ L L E +VV N+R+ KLY Y
Sbjct: 77 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 127
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 236
Q+ A+ Y+H + G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 128 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 184
Query: 237 R-YYRAPELIF--GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
Y APE++ G Y A+D WS G ++ + G P F L
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 234
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+++I N+ P++ W ++ K A+DLV +LL P R T +AL
Sbjct: 235 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 280
Query: 354 HPFFDE 359
HP+ +
Sbjct: 281 HPWLQD 286
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 42/293 (14%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV----LQDKRYKNRELQTMRLLDHPNVVS 128
Y E +G+GS+G V A T A KK+ ++D +E++ M+ LDHPN++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L F TD +YL + L E RVV H + +K + A++Y
Sbjct: 88 LYETFEDNTD---IYLVMELCTGGELFERVV-HKRVFRESDAARIMK----DVLSAVAYC 139
Query: 189 HRSIGVCHRDIKPQNLL--VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H+ + V HRD+KP+N L + +KL DFG A G+ + + + YY +P+++
Sbjct: 140 HK-LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G Y D WSAG ++ L+ G P F + + +++I + GT
Sbjct: 199 GL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT-------------- 240
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
F FP+ W + P+A L+ RLL SP R T+L AL H +F++
Sbjct: 241 -FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 150
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 151 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 207
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 208 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 249
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 250 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 126 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 183 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 224
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 225 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 56/306 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 119
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
L+HP ++ +K+ F D ++ Y+ L L E +VV N+R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 121
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 236
Q+ A+ Y+H + G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 237 R-YYRAPELIF--GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
Y APE++ G Y A+D WS G ++ + G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+++I N+ P++ W ++ K A+DLV +LL P R T +AL
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 354 HPFFDE 359
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE I G
Sbjct: 130 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 187 X-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 126
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 127 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 184 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 225
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 226 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 151/325 (46%), Gaps = 57/325 (17%)
Query: 68 KQTISYMAERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMR 119
K +S M +R+ +G G++G V + T AIK + + + E+ ++
Sbjct: 32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLK 91
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVL----EYVPETVHRVVKHFNKLNQRMPMIYVK 175
LLDHPN++ L + FF DK YL + E E +HR+ K N+ + +K
Sbjct: 92 LLDHPNIMKL-YDFFE--DKRNYYLVMECYKGGELFDEIIHRM-----KFNEVDAAVIIK 143
Query: 176 LYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISY 233
Q+ ++Y+H+ + HRD+KP+NLL+ +K+ DFG + V +
Sbjct: 144 ----QVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198
Query: 234 ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
+ + YY APE++ +Y D+WS G ++ L+ G P F G + DQ EI++
Sbjct: 199 LGTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQT--DQ--EILR----- 247
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
K YT F P+ W K + A DL+ ++LQ+ R +A AL
Sbjct: 248 -----KVEKGKYT-FDSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQALE 291
Query: 354 HPFFDELRDPNARLPSGRFLPPLFN 378
HP+ E+ ++ SG LP L N
Sbjct: 292 HPWIKEM---CSKKESGIELPSLAN 313
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 71 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 121
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 122 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 179 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 220
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 221 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 64/295 (21%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-------SAKVLVKGEPNISYICSRYYRA 241
H S V HRDIKP+NLL+ ++K+ DFG S + + G + Y
Sbjct: 126 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWSCHAPSSRRTTLSGTLD--------YLP 175
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE+I G + +D+WS G + E ++GKP F ++ + I +V
Sbjct: 176 PEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------ 222
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
EF FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 223 -----EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 128 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 128 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 41/288 (14%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL-----QDKRYKNRELQ-TMRLLDHPNVVSLKHC 132
+G+G++GVV + + + +G+ +A+K++ Q+++ +L +MR +D P V+
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
F D + + +E + ++ + K Q +P + A I +AL ++H +
Sbjct: 119 LFREGD-----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI---FGAT 249
V HRD+KP N+L+N QVK+CDFG + LV + Y APE I
Sbjct: 174 SVIHRDVKPSNVLIN-ALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
Y+ DIWS G + EL + + FP DS GTP ++
Sbjct: 233 GYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ------------- 266
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
Q+ P ++ + E VD S+ L+ + R T + + HPFF
Sbjct: 267 LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 126
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ +FG + V + + Y PE+I G
Sbjct: 127 H-SKRVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 184 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 225
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 226 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ +K +++ Y+ ++ ALSY
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ +FG + V + + Y PE+I G
Sbjct: 128 H-SKRVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 130 KHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P V++ ++ +K +++ Y+ ++ ALSY
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 130 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL-----QDKRYKNRELQ-TMRLLDHPNVVSLKHC 132
+G+G++GVV + + + +G+ +A+K++ Q+++ +L +MR +D P V+
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
F D + + +E + ++ + K Q +P + A I +AL ++H +
Sbjct: 75 LFREGD-----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRAPELI---FGA 248
V HRD+KP N+L+N QVK+CDFG + LV +I C + Y APE I
Sbjct: 130 SVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGC-KPYMAPERINPELNQ 187
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
Y+ DIWS G + EL + + FP DS GTP ++
Sbjct: 188 KGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ------------ 222
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
Q+ P ++ + E VD S+ L+ + R T + + HPFF
Sbjct: 223 -LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 130 KHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P V++ ++ +K +++ Y+ ++ ALSY
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 130 H-SKRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++GKP F ++ + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++P+ R + L HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 56/306 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 119
Y+ + +G G+ G V A +T + VAI+ ++ +++ E++ ++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 209
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
L+HP ++ +K+ F D ++ Y+ L L E +VV N+R+ KLY Y
Sbjct: 210 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 260
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 236
Q+ A+ Y+H + G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 261 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 317
Query: 237 R-YYRAPELIF--GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
Y APE++ G Y A+D WS G ++ + G P F L
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 367
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+++I N+ P++ W ++ K A+DLV +LL P R T +AL
Sbjct: 368 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 413
Query: 354 HPFFDE 359
HP+ +
Sbjct: 414 HPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 56/306 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 119
Y+ + +G G+ G V A +T + VAI+ ++ +++ E++ ++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 195
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
L+HP ++ +K+ F D ++ Y+ L L E +VV N+R+ KLY Y
Sbjct: 196 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 246
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 236
Q+ A+ Y+H + G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 247 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 303
Query: 237 R-YYRAPELIF--GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP 293
Y APE++ G Y A+D WS G ++ + G P F L
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 353
Query: 294 TREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+++I N+ P++ W ++ K A+DLV +LL P R T +AL
Sbjct: 354 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 399
Query: 354 HPFFDE 359
HP+ +
Sbjct: 400 HPWLQD 405
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 54/326 (16%)
Query: 79 VGQGSFGVVFQAKCLE---TGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G+FG V + C++ G VA+K V RY +++L+H N F
Sbjct: 22 LGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRC 79
Query: 136 TTDKDEL----YLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ ++ +V E + + + +K L R+ +++ AYQI ++++++H S
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVNFLH-S 136
Query: 192 IGVCHRDIKPQNLL---------------------VNPHTHQVKLCDFGSAKVLVKGEPN 230
+ H D+KP+N+L +NP +K+ DFGSA E +
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEHH 191
Query: 231 ISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVL 290
+ + +R+YRAPE+I A ++ D+WS GC++ E LG +FP + L + ++L
Sbjct: 192 STLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250
Query: 291 GTPTREEI-KCMNPNYTEFKFPQIKAHPWHKIFPKR--------MPPEAV------DLVS 335
G + I K Y H + R M + V DL+
Sbjct: 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQ 310
Query: 336 RLLQYSPNLRCTALDALIHPFFDELR 361
++L+Y P R T +AL HPFFD L+
Sbjct: 311 KMLEYDPAKRITLREALKHPFFDLLK 336
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ ++ +++ Y+ ++ ALSY
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYC 128
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ + ++K+ DFG + V + + Y PE+I G
Sbjct: 129 H-SKRVIHRDIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++G P F + + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EF 227
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++ + R T + L HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 124
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+++ L S KDE+ + V+EY + + +K++++ + + QI A
Sbjct: 75 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 125
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+ Y HR + HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+
Sbjct: 126 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 183
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
I G +D+WS G V+ +ML + L D + L + I N
Sbjct: 184 ISGKLYAGPEVDVWSCG-VILYVMLCRRLPFDDESIPVLFKNIS-------------NGV 229
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
YT PK + P A L+ R+L +P R + + + +F
Sbjct: 230 YT---------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 267
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 50/288 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 130 KHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F T + L+LEY P TV+R ++ ++ +++ Y+ ++ ALSY
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYC 128
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H S V HRDIKP+NLL+ + ++K+ DFG + V + + Y PE+I G
Sbjct: 129 H-SKRVIHRDIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
+ +D+WS G + E ++G P F + + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EF 227
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
FP + A DL+SRLL+++ + R T + L HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 54/326 (16%)
Query: 79 VGQGSFGVVFQAKCLE---TGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G+FG V + C++ G VA+K V RY +++L+H N F
Sbjct: 22 LGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRC 79
Query: 136 TTDKDEL----YLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ ++ +V E + + + +K L R+ +++ AYQI ++++++H S
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVNFLH-S 136
Query: 192 IGVCHRDIKPQNLL---------------------VNPHTHQVKLCDFGSAKVLVKGEPN 230
+ H D+KP+N+L +NP +K+ DFGSA E +
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEHH 191
Query: 231 ISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVL 290
+ + R+YRAPE+I A ++ D+WS GC++ E LG +FP + L + ++L
Sbjct: 192 STLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250
Query: 291 GTPTREEI-KCMNPNYTEFKFPQIKAHPWHKIFPKR--------MPPEAV------DLVS 335
G + I K Y H + R M + V DL+
Sbjct: 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQ 310
Query: 336 RLLQYSPNLRCTALDALIHPFFDELR 361
++L+Y P R T +AL HPFFD L+
Sbjct: 311 KMLEYDPAKRITLREALKHPFFDLLK 336
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 61 GGRN-GQPKQTIS--YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR---- 113
GGR+ P QT M ER+ G G FG V + +TGE VAIK+ Q+ KNR
Sbjct: 3 GGRSPSLPTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 61
Query: 114 -ELQTMRLLDHPNVVSLKHC--FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMP 170
E+Q M+ L+HPNVVS + ++L L L +EY R K+ N+
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLR--KYLNQFENCCG 118
Query: 171 MIY--VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQV--KLCDFGSAKVLVK 226
+ ++ I AL Y+H + + HRD+KP+N+++ P ++ K+ D G AK L +
Sbjct: 119 LKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 177
Query: 227 GEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLG-KPLFP 275
GE ++ + Y APEL+ +YT +D WS G + E + G +P P
Sbjct: 178 GELCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 124
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+++ L S KDE+ + V+EY + + +K++++ + + QI A
Sbjct: 74 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 124
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+ Y HR + HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+
Sbjct: 125 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
I G +D+WS G V+ +ML + L D + L + I N
Sbjct: 183 ISGKLYAGPEVDVWSCG-VILYVMLCRRLPFDDESIPVLFKNIS-------------NGV 228
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
YT PK + P A L+ R+L +P R + + + +F
Sbjct: 229 YT---------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 124
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+++ L S KDE+ + V+EY + + +K++++ + + QI A
Sbjct: 69 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 119
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+ Y HR + HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+
Sbjct: 120 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 177
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
I G +D+WS G V+ +ML + L D + L + I N
Sbjct: 178 ISGKLYAGPEVDVWSCG-VILYVMLCRRLPFDDESIPVLFKNIS-------------NGV 223
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
YT PK + P A L+ R+L +P R + + + +F
Sbjct: 224 YT---------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 261
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 61 GGRN-GQPKQTIS--YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR---- 113
GGR+ P QT M ER+ G G FG V + +TGE VAIK+ Q+ KNR
Sbjct: 2 GGRSPSLPTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 60
Query: 114 -ELQTMRLLDHPNVVSLKHC--FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMP 170
E+Q M+ L+HPNVVS + ++L L L +EY R K+ N+
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLR--KYLNQFENCCG 117
Query: 171 MIY--VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQV--KLCDFGSAKVLVK 226
+ ++ I AL Y+H + + HRD+KP+N+++ P ++ K+ D G AK L +
Sbjct: 118 LKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176
Query: 227 GEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLG-KPLFP 275
GE ++ + Y APEL+ +YT +D WS G + E + G +P P
Sbjct: 177 GELCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 124
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+++ L S KDE+ + V+EY + + +K++++ + + QI A
Sbjct: 65 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 115
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+ Y HR + HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+
Sbjct: 116 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 173
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
I G +D+WS G V+ +ML + L D + L + I N
Sbjct: 174 ISGKLYAGPEVDVWSCG-VILYVMLCRRLPFDDESIPVLFKNIS-------------NGV 219
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
YT PK + P A L+ R+L +P R + + + +F
Sbjct: 220 YT---------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 257
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 52/297 (17%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 124
Y+ +G G+FG V K TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+++ L + +D + +V+EYV E + K N R+ + QI
Sbjct: 77 HIIKLYQVISTPSD-----IFMVMEYVSGGELFDYICK-----NGRLDEKESRRLFQQIL 126
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 242
+ Y HR + V HRD+KP+N+L++ H + K+ DFG + ++ GE S Y AP
Sbjct: 127 SGVDYCHRHM-VVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSPNYAAP 184
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
E+I G +DIWS+G ++ L+ G F D PT + C
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-------------VPTLFKKICDG 231
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
YT P+ + P + L+ +LQ P R T D H +F +
Sbjct: 232 IFYT----------------PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY+P + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYMPGG--DMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY+P + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYMPGG--DMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K +E L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY P + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGLAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 147/346 (42%), Gaps = 90/346 (26%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDK----------RYKNRELQTMRLLD 122
Y + +GQGS+GVV A +T AIK + ++K R K E++ M+ L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT-EVRLMKKLH 86
Query: 123 HPNVVSLKHCFFSTTDKDELYLNLVLEYV------------------------------- 151
HPN+ L + +DE Y+ LV+E
Sbjct: 87 HPNIARLYEVY-----EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 152 -----PETVHRVVKHFNK---LNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQN 203
E ++ + F + QR +I + QIF AL Y+H G+CHRDIKP+N
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMR--QIFSALHYLHNQ-GICHRDIKPEN 198
Query: 204 LLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE-YTTAID 256
L + + + ++KL DFG +K K Y + Y+ APE++ E Y D
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 257 IWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 316
WSAG ++ L++G FPG + D + +++ +++ NPNY
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDADTISQVLN-------KKLCFENPNYN---------- 301
Query: 317 PWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
+ P A DL+S LL + + R A+ AL HP+ + D
Sbjct: 302 --------VLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 117/229 (51%), Gaps = 19/229 (8%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG + +
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCGTPE 204
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 51/315 (16%)
Query: 65 GQPKQTISYMAERI-VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 117
G P+ SY+ I +G+GS G+V A +G+ VA+KK+ D R + R E+
Sbjct: 20 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 74
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
MR H NVV + + + DEL++ V+E++ + ++N+ +
Sbjct: 75 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 125
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
+ +ALS +H + GV HRDIK ++L+ H +VKL DFG + K P +
Sbjct: 126 CLAVLQALSVLH-AQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 183
Query: 238 -YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTRE 296
Y+ APELI Y +DIWS G +V E++ G+P + P +
Sbjct: 184 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPY---------------FNEPPLK 227
Query: 297 EIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+K + N P++K HK+ P + RLL P R TA + L HPF
Sbjct: 228 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 276
Query: 357 FDELRDPNARLPSGR 371
+ P + +P R
Sbjct: 277 LAKAGPPASIVPLMR 291
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 141/313 (45%), Gaps = 48/313 (15%)
Query: 67 PKQTISYMAERI-VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMR 119
P SY+ I +G+GS G+V A +G+ VA+KK+ D R + R E+ MR
Sbjct: 69 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMR 126
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
H NVV + + + DEL++ V+E++ + ++N+ +
Sbjct: 127 DYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVCL 177
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-Y 238
+ +ALS +H + GV HRDIK ++L+ H +VKL DFG + K P + Y
Sbjct: 178 AVLQALSVLH-AQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 235
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
+ APELI Y +DIWS G +V E++ G+P + P + +
Sbjct: 236 WMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPY---------------FNEPPLKAM 279
Query: 299 KCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFD 358
K + N P++K HK+ P + RLL P R TA + L HPF
Sbjct: 280 KMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPFLA 328
Query: 359 ELRDPNARLPSGR 371
+ P + +P R
Sbjct: 329 KAGPPASIVPLMR 341
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 51/315 (16%)
Query: 65 GQPKQTISYMAERI-VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 117
G P+ SY+ I +G+GS G+V A +G+ VA+KK+ D R + R E+
Sbjct: 27 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 81
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
MR H NVV + + + DEL++ V+E++ + ++N+ +
Sbjct: 82 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 132
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
+ +ALS +H + GV HRDIK ++L+ H +VKL DFG + K P +
Sbjct: 133 CLAVLQALSVLH-AQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 190
Query: 238 -YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTRE 296
Y+ APELI Y +DIWS G +V E++ G+P + P +
Sbjct: 191 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPY---------------FNEPPLK 234
Query: 297 EIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+K + N P++K HK+ P + RLL P R TA + L HPF
Sbjct: 235 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 283
Query: 357 FDELRDPNARLPSGR 371
+ P + +P R
Sbjct: 284 LAKAGPPASIVPLMR 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY P + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 51/315 (16%)
Query: 65 GQPKQTISYMAERI-VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 117
G P+ SY+ I +G+GS G+V A +G+ VA+KK+ D R + R E+
Sbjct: 25 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 79
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
MR H NVV + + + DEL++ V+E++ + ++N+ +
Sbjct: 80 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 130
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
+ +ALS +H + GV HRDIK ++L+ H +VKL DFG + K P +
Sbjct: 131 CLAVLQALSVLH-AQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 188
Query: 238 -YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTRE 296
Y+ APELI Y +DIWS G +V E++ G+P + P +
Sbjct: 189 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPY---------------FNEPPLK 232
Query: 297 EIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+K + N P++K HK+ P + RLL P R TA + L HPF
Sbjct: 233 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 281
Query: 357 FDELRDPNARLPSGR 371
+ P + +P R
Sbjct: 282 LAKAGPPASIVPLMR 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 51/315 (16%)
Query: 65 GQPKQTISYMAERI-VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 117
G P+ SY+ I +G+GS G+V A +G+ VA+KK+ D R + R E+
Sbjct: 16 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 70
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
MR H NVV + + + DEL++ V+E++ + ++N+ +
Sbjct: 71 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 121
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
+ +ALS +H + GV HRDIK ++L+ H +VKL DFG + K P +
Sbjct: 122 CLAVLQALSVLH-AQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 179
Query: 238 -YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTRE 296
Y+ APELI Y +DIWS G +V E++ G+P + P +
Sbjct: 180 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPY---------------FNEPPLK 223
Query: 297 EIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+K + N P++K HK+ P + RLL P R TA + L HPF
Sbjct: 224 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 272
Query: 357 FDELRDPNARLPSGR 371
+ P + +P R
Sbjct: 273 LAKAGPPASIVPLMR 287
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY P + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFXEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 142/322 (44%), Gaps = 50/322 (15%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 118
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
+ LD+P+VV H FF +D+ ++ +VLE R + +K + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFM 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSR 237
Q + + Y+H + V HRD+K NL +N VK+ DFG A K+ GE + +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
Y APE + ++ +DIWS GC++ L++GKP F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
C+ Y +IK + + P+ + P A L+ R+L P LR + + L FF
Sbjct: 244 TSCLKETYI-----RIKKNEYS--VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 358 DELRDPNARLPSGRF-LPPLFN 378
P RLP+ +PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFXEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 48/310 (15%)
Query: 67 PKQTISYMAERI-VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMR 119
P SY+ I +G+GS G+V A +G+ VA+KK+ D R + R E+ MR
Sbjct: 146 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMR 203
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY 179
H NVV + + + DEL++ V+E++ + ++N+ +
Sbjct: 204 DYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVCL 254
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRY 238
+ +ALS +H + GV HRDIK ++L+ H +VKL DFG + K P + + Y
Sbjct: 255 AVLQALSVLH-AQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 312
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
+ APELI Y +DIWS G +V E++ G+P + P + +
Sbjct: 313 WMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPY---------------FNEPPLKAM 356
Query: 299 KCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFD 358
K + N P++K HK+ P + RLL P R TA + L HPF
Sbjct: 357 KMIRDNLP----PRLKN--LHKVS-----PSLKGFLDRLLVRDPAQRATAAELLKHPFLA 405
Query: 359 ELRDPNARLP 368
+ P + +P
Sbjct: 406 KAGPPASIVP 415
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFXEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 117/229 (51%), Gaps = 19/229 (8%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 19 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYVP + H ++ R + + YA
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 133
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG + +
Sbjct: 134 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCGTPE 189
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 190 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 236
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY P + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFXEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 141/322 (43%), Gaps = 50/322 (15%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 118
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 21 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 80
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
+ LD+P+VV H FF +D+ ++ +VLE R + +K + + + +
Sbjct: 81 KSLDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFM 132
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSR 237
Q + + Y+H + V HRD+K NL +N VK+ DFG A K+ GE +
Sbjct: 133 RQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
Y APE + ++ +DIWS GC++ L++GKP F E
Sbjct: 191 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 227
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
C+ Y +IK + + P+ + P A L+ R+L P LR + + L FF
Sbjct: 228 TSCLKETYI-----RIKKNEYS--VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 280
Query: 358 DELRDPNARLPSGRF-LPPLFN 378
P RLP+ +PP F+
Sbjct: 281 TSGYAP-MRLPTSCLTVPPRFS 301
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 141/322 (43%), Gaps = 50/322 (15%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 118
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
+ LD+P+VV H FF +D+ ++ +VLE R + +K + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFM 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSR 237
Q + + Y+H + V HRD+K NL +N VK+ DFG A K+ GE +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
Y APE + ++ +DIWS GC++ L++GKP F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
C+ Y +IK + + P+ + P A L+ R+L P LR + + L FF
Sbjct: 244 TSCLKETYI-----RIKKNEYS--VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 358 DELRDPNARLPSGRF-LPPLFN 378
P RLP+ +PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY P + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K +E L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY P + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +++ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IQVTDFGLAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 42/295 (14%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDK-----RYKNRELQTMRLLDHPNVV 127
++ +R +G G+FG V + +G IK + +D+ E++ ++ LDHPN++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+ F D +Y+ + E + R+V + + + YV Q+ AL+Y
Sbjct: 84 KIFEVF---EDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAY 139
Query: 188 IHRSIGVCHRDIKPQNLL---VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
H S V H+D+KP+N+L +PH+ +K+ DFG A++ E + + + Y APE+
Sbjct: 140 FH-SQHVVHKDLKPENILFQDTSPHS-PIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV 197
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ T DIWSAG V+ L+ G F G S L E+ +++ PN
Sbjct: 198 F--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEV--------QQKATYKEPN 243
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
Y ++ P + P+AVDL+ ++L P R +A L H +F +
Sbjct: 244 YA------VECRP--------LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 141/322 (43%), Gaps = 50/322 (15%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 118
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
+ LD+P+VV H FF +D+ ++ +VLE R + +K + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFM 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSR 237
Q + + Y+H + V HRD+K NL +N VK+ DFG A K+ GE +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
Y APE + ++ +DIWS GC++ L++GKP F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
C+ Y +IK + + P+ + P A L+ R+L P LR + + L FF
Sbjct: 244 TSCLKETYI-----RIKKNEYS--VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 358 DELRDPNARLPSGRF-LPPLFN 378
P RLP+ +PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY P + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFXEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 46/298 (15%)
Query: 68 KQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN----RELQTMRLLDH 123
++T +M ++G G+F VF K TG+ A+K + + +++ E+ ++ + H
Sbjct: 8 RKTFIFM--EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
N+V+L+ + STT YL + L E R+++ + ++ Q+
Sbjct: 66 ENIVTLEDIYESTT---HYYLVMQLVSGGELFDRILERGVYTEKDASLV-----IQQVLS 117
Query: 184 ALSYIHRSIGVCHRDIKPQNLL-VNPHTH-QVKLCDFGSAKVLVKGEPNISYICSR-YYR 240
A+ Y+H + G+ HRD+KP+NLL + P + ++ + DFG +K+ G +S C Y
Sbjct: 118 AVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYV 174
Query: 241 APELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKC 300
APE + Y+ A+D WS G + L+ G P F ++ +L E IK
Sbjct: 175 APE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK------------ 220
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFD 358
Y EF+ P F + A D + LL+ PN R T AL HP+ D
Sbjct: 221 --EGYYEFESP----------FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 133/297 (44%), Gaps = 47/297 (15%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDH 123
QP++ + + +G+GS+G V++A ETG+ VAIK+V + + +E+ M+ D
Sbjct: 26 QPEEVFDVLEK--LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS 83
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYV-PETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
P+VV +F TD L +V+EY +V +++ NK + +
Sbjct: 84 PHVVKYYGSYFKNTD-----LWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTL 135
Query: 183 RALSYIH--RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-ICSRYY 239
+ L Y+H R I HRDIK N+L+N H KL DFG A L + I + ++
Sbjct: 136 KGLEYLHFMRKI---HRDIKAGNILLNTEGH-AKLADFGVAGQLTDXMAKRNXVIGTPFW 191
Query: 240 RAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIK 299
APE+I Y DIWS G E+ GKP + + + + PT
Sbjct: 192 MAPEVI-QEIGYNCVADIWSLGITAIEMAEGKPPYA------DIHPMRAIFMIPT----- 239
Query: 300 CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
NP T F+ P++ W F D V + L SP R TA L HPF
Sbjct: 240 --NPPPT-FRKPEL----WSDNF--------TDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 54 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY+ V+EYVP + H ++ R + + YA
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYM--VMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 168
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 169 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 223
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 224 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 271
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY+ V+EYVP + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYM--VMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 27/233 (11%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIK-----KVLQDKRYKN--REL 115
P Q +++ ERI +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 116 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVK 175
+ ++ ++ P +V L++ F KD L +V+EYVP + H ++ R + +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG--EMFSHLRRIG-RFSEPHAR 144
Query: 176 LYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 235
YA QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 236 SR-YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY+ V+EYVP + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYM--VMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY+ V+EYVP + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYM--VMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY+ V+EYVP + H ++ R + + YA
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYM--VMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 140
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 141 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 195
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 196 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 27/233 (11%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIK-----KVLQDKRYKN--REL 115
P Q +++ ERI +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 116 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVK 175
+ ++ ++ P +V L++ F KD L +V+EYVP + H ++ R + +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG--EMFSHLRRIG-RFSEPHAR 144
Query: 176 LYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 235
YA QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 236 SR-YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 27/233 (11%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIK-----KVLQDKRYKN--REL 115
P Q +++ ERI +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 116 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVK 175
+ ++ ++ P +V L++ F KD L +V+EYVP + H ++ R + +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG--EMFSHLRRIG-RFSEPHAR 144
Query: 176 LYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 235
YA QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 236 SR-YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 27/233 (11%)
Query: 67 PKQTISYMAE----RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKRYKN--REL 115
P Q +++ + R +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 116 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVK 175
+ + ++ P +V L+ FS D LY +VLEY P + H ++ R + +
Sbjct: 94 RIQQAVNFPFLVKLE---FSFKDNSNLY--MVLEYAPGG--EMFSHLRRIG-RFSEPHAR 145
Query: 176 LYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 235
YA QI Y+H S+ + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLC 200
Query: 236 SR-YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EY P + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +++ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 129
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ L HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+ C+ E LV+EY + +++ K Q + + V A Q L+Y+H
Sbjct: 120 RGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLH 171
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 249
S + HRD+K N+L++ VKL DFGSA ++ P ++ + Y+ APE+I
Sbjct: 172 -SHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMD 226
Query: 250 E--YTTAIDIWSAGCVVAELMLGKP 272
E Y +D+WS G EL KP
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKP 251
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY+ V+EYVP + H ++ R + + YA
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYM--VMEYVPGG--EMFSHLRRIG-RFXEPHARFYA 140
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 141 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 195
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 196 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 243
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 51/308 (16%)
Query: 62 GRNGQPKQTISYMAERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ 113
GR Q +S +R+ +G G++G V K TG AIK + +
Sbjct: 10 GRENLYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL 69
Query: 114 -ELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNK--LNQRMP 170
E+ ++ LDHPN++ L F DK YL V+E V+R + F++ L Q+
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFF---EDKRNYYL--VME-----VYRGGELFDEIILRQKFS 119
Query: 171 MIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGE 228
+ + Q+ +Y+H+ + HRD+KP+NLL+ + +K+ DFG + G
Sbjct: 120 EVDAAVIMKQVLSGTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
Query: 229 PNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
+ + YY APE++ +Y D+WS G ++ L+ G P F G + DQ +
Sbjct: 179 KMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----E 229
Query: 289 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTA 348
+L + + P++T+ + EA LV +L Y P+ R +A
Sbjct: 230 ILKRVEKGKFSFDPPDWTQ------------------VSDEAKQLVKLMLTYEPSKRISA 271
Query: 349 LDALIHPF 356
+AL HP+
Sbjct: 272 EEALNHPW 279
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 143/302 (47%), Gaps = 46/302 (15%)
Query: 64 NGQPKQTIS--YMAERIVGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMR 119
+G + +S + E +G+G+ +V++ K T + A+K K DK+ E+ +
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL 103
Query: 120 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLY 177
L HPN++ LK F + T+ ++LVLE V E R+V+ ++R VK
Sbjct: 104 RLSHPNIIKLKEIFETPTE-----ISLVLELVTGGELFDRIVEK-GYYSERDAADAVK-- 155
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLL-VNPHTHQ-VKLCDFGSAKVLVKGEPNISYIC 235
QI A++Y+H + G+ HRD+KP+NLL P +K+ DFG +K+ V+ + + +C
Sbjct: 156 --QILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI-VEHQVLMKTVC 211
Query: 236 SR-YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPT 294
Y APE++ G Y +D+WS G + L+ G F + G DQ +
Sbjct: 212 GTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM---------F 260
Query: 295 REEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIH 354
R + C E+ F PW + A DLV +L+ P R T AL H
Sbjct: 261 RRILNC------EYYF----ISPWW----DEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306
Query: 355 PF 356
P+
Sbjct: 307 PW 308
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 115/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY+ V+EY P + H ++ R + + YA
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYM--VMEYAPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 48/314 (15%)
Query: 54 HIIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV----LQDKR 109
H IVT + G + I+G G FG V + + TG +A K + ++DK
Sbjct: 75 HRIVT---AKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE 131
Query: 110 YKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQ 167
E+ M LDH N++ L F S D + LV+EYV E R++ L +
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKND-----IVLVMEYVDGGELFDRIIDESYNLTE 186
Query: 168 RMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLL-VNPHTHQVKLCDFGSAKVLVK 226
++++K QI + ++H+ + + H D+KP+N+L VN Q+K+ DFG A+
Sbjct: 187 LDTILFMK----QICEGIRHMHQ-MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241
Query: 227 GEPNISYICSRYYRAPELI-FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVE 285
E + + APE++ + + T D+WS G + L+ G F GD+ + L
Sbjct: 242 REKLKVNFGTPEFLAPEVVNYDFVSFPT--DMWSVGVIAYMLLSGLSPFLGDNDAETLNN 299
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR 345
I+ EE + + EA + +S+LL + R
Sbjct: 300 ILACRWDLEDEEF-------------------------QDISEEAKEFISKLLIKEKSWR 334
Query: 346 CTALDALIHPFFDE 359
+A +AL HP+ +
Sbjct: 335 ISASEALKHPWLSD 348
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 67 PKQTISYMA--ERI--VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 118
P Q +++ ERI +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
R+L N L FS D LY +V+EYV + H ++ R + + YA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVAGG--EMFSHLRRIG-RFSEPHARFYA 147
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 237
QI Y+H S+ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 202
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y APE+I + Y A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 124
Y+ +G G+FG V + TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+++ L + TD +V+EYV E + KH R+ + + QI
Sbjct: 72 HIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKH-----GRVEEMEARRLFQQIL 121
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 242
A+ Y HR + V HRD+KP+N+L++ H K+ DFG + ++ GE + S Y AP
Sbjct: 122 SAVDYCHRHM-VVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLG 270
E+I G +DIWS G ++ L+ G
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 129
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ L HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+ C+ E LV+EY + +++ K Q + + V A Q L+Y+H
Sbjct: 81 RGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLH 132
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 249
S + HRD+K N+L++ VKL DFGSA ++ P ++ + Y+ APE+I
Sbjct: 133 -SHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMD 187
Query: 250 E--YTTAIDIWSAGCVVAELMLGKP 272
E Y +D+WS G EL KP
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKP 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 59/311 (18%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR--------- 113
R + K SY R +G G++G V K AIK + + + K R
Sbjct: 28 RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIE 87
Query: 114 --------ELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFN 163
E+ ++ LDHPN++ L F +D+ Y LV E+ E +++ +
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINR-H 141
Query: 164 KLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSA 221
K ++ +K QI + Y+H+ + HRDIKP+N+L+ +K+ DFG +
Sbjct: 142 KFDECDAANIMK----QILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Query: 222 KVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVD 281
K + + YY APE++ +Y D+WS G ++ L+ G P F G + D
Sbjct: 197 SFFSKDYKLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD 254
Query: 282 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS 341
+ ++ K Y +F + W K + EA +L+ +L Y
Sbjct: 255 IIKKVEK-------------GKYYFDF-------NDW-----KNISDEAKELIKLMLTYD 289
Query: 342 PNLRCTALDAL 352
N RCTA +AL
Sbjct: 290 YNKRCTAEEAL 300
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 124
Y+ +G G+FG V + TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+++ L + TD +V+EYV E + KH R+ + + QI
Sbjct: 72 HIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKH-----GRVEEMEARRLFQQIL 121
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 242
A+ Y HR + V HRD+KP+N+L++ H K+ DFG + ++ GE S Y AP
Sbjct: 122 SAVDYCHRHM-VVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLG 270
E+I G +DIWS G ++ L+ G
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 53/315 (16%)
Query: 59 TIGGRNGQPKQTISYMAERI---------VGQGSFGVVFQAKCLETGETVAIK----KVL 105
++ NG+ + AE I +G G+F V A+ TG+ A+K K L
Sbjct: 1 SMARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 60
Query: 106 QDKRYK-NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVV-KHFN 163
+ K E+ +R + H N+V+L+ + S + LYL + L E R+V K F
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESP---NHLYLVMQLVSGGELFDRIVEKGFY 117
Query: 164 KLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVK--LCDFGSA 221
+I Q+ A+ Y+HR +G+ HRD+KP+NLL + K + DFG +
Sbjct: 118 TEKDASTLIR------QVLDAVYYLHR-MGIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Query: 222 KVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVD 281
K+ KG+ + + Y APE + Y+ A+D WS G + L+ G P F ++
Sbjct: 171 KMEGKGDVMSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK 229
Query: 282 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS 341
+I+K EF P W I A D + L++
Sbjct: 230 LFEQILKA---------------EYEFDSPY-----WDDI-----SDSAKDFIRNLMEKD 264
Query: 342 PNLRCTALDALIHPF 356
PN R T A HP+
Sbjct: 265 PNKRYTCEQAARHPW 279
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 49/295 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR-------ELQTMRLLDHPN 125
Y + +G G++G V K TG AIK + + E+ ++ LDHPN
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNK--LNQRMPMIYVKLYAYQIFR 183
++ L F DK YL V+E V+R + F++ L Q+ + + Q+
Sbjct: 66 IMKLYEFF---EDKRNYYL--VME-----VYRGGELFDEIILRQKFSEVDAAVIMKQVLS 115
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRA 241
+Y+H+ + HRD+KP+NLL+ + +K+ DFG + G + + YY A
Sbjct: 116 GTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE++ +Y D+WS G ++ L+ G P F G + DQ ++L + +
Sbjct: 175 PEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----EILKRVEKGKFSFD 225
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
P++T+ + EA LV +L Y P+ R +A +AL HP+
Sbjct: 226 PPDWTQ------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHPW 262
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 57/312 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPN 125
Y+ +G+GSFG V A +T + VA+K + + K+ RE+ ++LL HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
++ L + TD + +V+EY E +V+ +RM + + QI A
Sbjct: 71 IIKLYDVITTPTD-----IVMVIEYAGGELFDYIVE-----KKRMTEDEGRRFFQQIICA 120
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+ Y HR + HRD+KP+NLL++ + + VK+ DFG + ++ G + S Y APE+
Sbjct: 121 IEYCHRH-KIVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
I G +D+WS G V+ +++G+ P D D+ + PN
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGR--LPFD---DEFI------------------PN 215
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPN 364
FK K + + P + P A L+ R++ P R T + P+F N
Sbjct: 216 L--FK----KVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF------N 263
Query: 365 ARLPSGRFLPPL 376
LP +L P+
Sbjct: 264 VNLPD--YLRPM 273
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 155/352 (44%), Gaps = 75/352 (21%)
Query: 30 NDMKIRDDKEME---ATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAE----RIVGQG 82
+ +K ++++EM+ + D +G E + + +PK ++ M E +++G+G
Sbjct: 111 DGLKKQEEEEMDFRSGSPSDNSGAEEMEVSL-------AKPKHRVT-MNEFEYLKLLGKG 162
Query: 83 SFGVVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 132
+FG V K TG E + K + +NR LQ R HP + +LK+
Sbjct: 163 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFLTALKYS 219
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
F T D+ L V+EY + H ++ + + Y +I AL Y+H
Sbjct: 220 F-QTHDR----LCFVMEYA--NGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
V +RD+K +NL+++ H +K+ DFG K +K + C Y APE + +Y
Sbjct: 272 NVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VLEDNDY 329
Query: 252 TTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 310
A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM------EEIR----------- 370
Query: 311 PQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC-----TALDALIHPFF 357
FP+ + PEA L+S LL+ P R A + + H FF
Sbjct: 371 -----------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 25/214 (11%)
Query: 76 ERI--VGQGSFGVVFQAKCLETGETVA-------IKKVLQDKRYKNRELQTMRLLDHPNV 126
ERI +G G+ GVV + + +G +A IK ++++ RELQ + + P +
Sbjct: 19 ERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII--RELQVLHECNSPYI 76
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
V F+S + +++ +E++ ++ +V+K +R+P + + + R L
Sbjct: 77 VGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGL 127
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
+Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y APE +
Sbjct: 128 AYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMAPERL 185
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDS 278
G T Y+ DIWS G + EL +G+ P+ P D+
Sbjct: 186 QG-THYSVQSDIWSMGLSLVELAVGRYPIPPPDA 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 137/296 (46%), Gaps = 56/296 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDK--------RYKNRELQTMRLLDHP 124
Y +G G F V A + TGE VAIK + DK R K E++ ++ L H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK--IMDKNTLGSDLPRIKT-EIEALKNLRHQ 68
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
++ L H T +K + +VLEY P E ++ ++L++ + + QI
Sbjct: 69 HICQLYH-VLETANK----IFMVLEYCPGGELFDYIISQ-DRLSEEETRVVFR----QIV 118
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYIC-SRYYR 240
A++Y+H S G HRD+KP+NLL + + H++KL DFG AK + ++ C S Y
Sbjct: 119 SAVAYVH-SQGYAHRDLKPENLLFDEY-HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 241 APELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKC 300
APELI G + + D+WS G ++ LM G P D D ++ + K K
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCG--FLPFDD--DNVMALYK----------KI 222
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
M Y PK + P ++ L+ ++LQ P R + + L HP+
Sbjct: 223 MRGKYD---------------VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 60/298 (20%)
Query: 77 RIVGQGSFGVVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 126
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 71
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+LK+ F T D+ L V+EY + H ++ + + Y +I AL
Sbjct: 72 TALKYSF-QTHDR----LCFVMEYA--NGGELFFHLSR-ERVFSEDRARFYGAEIVSALD 123
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 245
Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE +
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-V 181
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM------EEIR----- 228
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC-----TALDALIHPFF 357
FP+ + PEA L+S LL+ P R A + + H FF
Sbjct: 229 -----------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 136/316 (43%), Gaps = 50/316 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLK 130
+G+G F F+ +T E A K V + K RE +M R L H +VV
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF- 82
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
H FF D ++ +VLE R + +K + + + Y QI Y+HR
Sbjct: 83 HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGAT 249
+ V HRD+K NL +N +VK+ DFG A KV GE + + Y APE +
Sbjct: 136 N-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKK 192
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
++ +D+WS GC++ L++GKP F E C+ Y
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL--- 227
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP- 368
+IK + + PK + P A L+ ++LQ P R T + L FF P ARLP
Sbjct: 228 --RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPI 282
Query: 369 SGRFLPPLFNFKSHEL 384
+ +PP F+ L
Sbjct: 283 TCLTIPPXFSIAPSSL 298
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 124/289 (42%), Gaps = 43/289 (14%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLKHC 132
+G+G++GVV + + + +G+ A+K++ + KR + R +D P V+
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
F D + + E ++ + K Q +P + A I +AL ++H +
Sbjct: 102 LFREGD-----VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRAPELI---FGA 248
V HRD+KP N+L+N QVK CDFG + LV +I C + Y APE I
Sbjct: 157 SVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGC-KPYXAPERINPELNQ 214
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
Y+ DIWS G EL + + FP DS GTP ++
Sbjct: 215 KGYSVKSDIWSLGITXIELAILR--FPYDS-----------WGTPFQQ------------ 249
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
Q+ P ++ + E VD S+ L+ + R T + HPFF
Sbjct: 250 -LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 60/298 (20%)
Query: 77 RIVGQGSFGVVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 126
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 72
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+LK+ F T D+ L V+EY + H ++ + + Y +I AL
Sbjct: 73 TALKYSF-QTHDR----LCFVMEYA--NGGELFFHLSR-ERVFSEDRARFYGAEIVSALD 124
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 245
Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE +
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-V 182
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM------EEIR----- 229
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC-----TALDALIHPFF 357
FP+ + PEA L+S LL+ P R A + + H FF
Sbjct: 230 -----------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 60/298 (20%)
Query: 77 RIVGQGSFGVVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 126
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 70
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+LK+ F T D+ L V+EY + H ++ + + Y +I AL
Sbjct: 71 TALKYSF-QTHDR----LCFVMEYA--NGGELFFHLSR-ERVFSEDRARFYGAEIVSALD 122
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 245
Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE +
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-V 180
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM------EEIR----- 227
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC-----TALDALIHPFF 357
FP+ + PEA L+S LL+ P R A + + H FF
Sbjct: 228 -----------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 150/313 (47%), Gaps = 64/313 (20%)
Query: 74 MAERIVGQGSFG-VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 128
++E+I+G GS G VVFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 90
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA-----YQIFR 183
++ TTD+ +L + LE + +V+ N ++ + + K Y QI
Sbjct: 91 -RYYCSETTDR---FLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 144
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNI 231
++++H S+ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 145 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 232 SYIC-----SRYYRAPELIFGATE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLV 284
+ +RAPEL+ +T+ T +IDI+S GCV +L K P +
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRES 262
Query: 285 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNL 344
II+ G + +E+KC++ + + EA DL+S+++ + P
Sbjct: 263 NIIR--GIFSLDEMKCLHD--------------------RSLIAEATDLISQMIDHDPLK 300
Query: 345 RCTALDALIHPFF 357
R TA+ L HP F
Sbjct: 301 RPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 150/313 (47%), Gaps = 64/313 (20%)
Query: 74 MAERIVGQGSFG-VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 128
++E+I+G GS G VVFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 90
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA-----YQIFR 183
++ TTD+ +L + LE + +V+ N ++ + + K Y QI
Sbjct: 91 -RYYCSETTDR---FLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 144
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNI 231
++++H S+ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 145 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 232 SYIC-----SRYYRAPELIFGATE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLV 284
+ +RAPEL+ +T+ T +IDI+S GCV +L K P +
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRES 262
Query: 285 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNL 344
II+ G + +E+KC++ + + EA DL+S+++ + P
Sbjct: 263 NIIR--GIFSLDEMKCLHD--------------------RSLIAEATDLISQMIDHDPLK 300
Query: 345 RCTALDALIHPFF 357
R TA+ L HP F
Sbjct: 301 RPTAMKVLRHPLF 313
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 138/294 (46%), Gaps = 56/294 (19%)
Query: 77 RIVGQGSFGVVFQAKCL---ETGETVAIK-----KVLQDKRYKNRELQTMRLLDH----P 124
+++G G++G VF + + +TG+ A+K ++Q + ++L+H P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--VKLYAYQIF 182
+V+L + F + E L+L+L+Y+ + F L+QR V++Y +I
Sbjct: 120 FLVTLHYAF-----QTETKLHLILDYINGG-----ELFTHLSQRERFTEHEVQIYVGEIV 169
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-ICSRY-YR 240
AL ++H+ +G+ +RDIK +N+L++ + H V L DFG +K V E +Y C Y
Sbjct: 170 LALEHLHK-LGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 241 APELIFGA-TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIK 299
AP+++ G + + A+D WS G ++ EL+ G F D + EI +R +K
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------SRRILK 280
Query: 300 CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR--CTALDA 351
P +P+ M A DL+ RLL P R C DA
Sbjct: 281 SEPP------------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDA 316
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 60/298 (20%)
Query: 77 RIVGQGSFGVVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 126
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 210
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+LK+ F T D+ L V+EY + H ++ + + Y +I AL
Sbjct: 211 TALKYSF-QTHDR----LCFVMEYA--NGGELFFHLSR-ERVFSEDRARFYGAEIVSALD 262
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 245
Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE +
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-V 320
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM------EEIR----- 367
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC-----TALDALIHPFF 357
FP+ + PEA L+S LL+ P R A + + H FF
Sbjct: 368 -----------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 136/304 (44%), Gaps = 47/304 (15%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCFF 134
+G G+FGVV + TG A K V+ DK +E+QTM +L HP +V+L F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 223
Query: 135 STTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+D+ + ++ E++ E +V NK+++ + Y++ Q+ + L ++H +
Sbjct: 224 ----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHEN- 274
Query: 193 GVCHRDIKPQNLL-VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TE 250
H D+KP+N++ ++++KL DFG L + + + APE+ G
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 310
Y T D+WS G + L+ G F G++ + L +K + N + F
Sbjct: 335 YYT--DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAF 380
Query: 311 PQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP--NARLP 368
I + D + +LL PN R T AL HP+ P ++++P
Sbjct: 381 SGISE-------------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427
Query: 369 SGRF 372
S R+
Sbjct: 428 SSRY 431
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 136/316 (43%), Gaps = 50/316 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLK 130
+G+G F F+ +T E A K V + K RE +M R L H +VV
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF- 82
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
H FF D ++ +VLE R + +K + + + Y QI Y+HR
Sbjct: 83 HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGAT 249
+ V HRD+K NL +N +VK+ DFG A KV GE + + Y APE +
Sbjct: 136 N-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKK 192
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
++ +D+WS GC++ L++GKP F E C+ Y
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL--- 227
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP- 368
+IK + + PK + P A L+ ++LQ P R T + L FF P ARLP
Sbjct: 228 --RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPI 282
Query: 369 SGRFLPPLFNFKSHEL 384
+ +PP F+ L
Sbjct: 283 TCLTIPPRFSIAPSSL 298
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 136/316 (43%), Gaps = 50/316 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLK 130
+G+G F F+ +T E A K V + K RE +M R L H +VV
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF- 86
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
H FF D ++ +VLE R + +K + + + Y QI Y+HR
Sbjct: 87 HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 139
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGAT 249
+ V HRD+K NL +N +VK+ DFG A KV GE + + Y APE +
Sbjct: 140 N-RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKK 196
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
++ +D+WS GC++ L++GKP F E C+ Y
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL--- 231
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP- 368
+IK + + PK + P A L+ ++LQ P R T + L FF P ARLP
Sbjct: 232 --RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPI 286
Query: 369 SGRFLPPLFNFKSHEL 384
+ +PP F+ L
Sbjct: 287 TCLTIPPRFSIAPSSL 302
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 142/303 (46%), Gaps = 39/303 (12%)
Query: 79 VGQGSFGVVFQAKCLETGETVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 98
Query: 132 CFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 99 AFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLRE 149
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 150 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 206
Query: 251 YTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
Y+ DIWS G + E+ +G+ P+ P D+ +L+ +V G + P K
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266
Query: 310 FPQIKAHPWHKIF----------PKRMPP-----EAVDLVSRLLQYSPNLRCTALDALIH 354
F + + P IF P ++P E D V++ L +P R ++H
Sbjct: 267 F-GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325
Query: 355 PFF 357
F
Sbjct: 326 AFI 328
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 136/304 (44%), Gaps = 47/304 (15%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCFF 134
+G G+FGVV + TG A K V+ DK +E+QTM +L HP +V+L F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 117
Query: 135 STTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+D+ + ++ E++ E +V NK+++ + Y++ Q+ + L ++H +
Sbjct: 118 ----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHEN- 168
Query: 193 GVCHRDIKPQNLL-VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TE 250
H D+KP+N++ ++++KL DFG L + + + APE+ G
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 251 YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 310
Y T D+WS G + L+ G F G++ + L +K + N + F
Sbjct: 229 YYT--DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAF 274
Query: 311 PQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP--NARLP 368
I + D + +LL PN R T AL HP+ P ++++P
Sbjct: 275 SGISE-------------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321
Query: 369 SGRF 372
S R+
Sbjct: 322 SSRY 325
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 25/216 (11%)
Query: 65 GQPKQTISYMAERI-VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 117
G P++ Y+A I +G+GS G+V A TG+ VA+KK+ D R + R E+
Sbjct: 41 GDPRE---YLANFIKIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVI 95
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
MR H NVV + + DEL++ V+E++ + ++N+ +
Sbjct: 96 MRDYHHDNVVDMYSSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IATV 146
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
+ RALSY+H GV HRDIK ++L+ ++KL DFG + K P +
Sbjct: 147 CLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKEVPKRKXLVGT 204
Query: 238 -YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKP 272
Y+ APE+I Y T +DIWS G +V E++ G+P
Sbjct: 205 PYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDGEP 239
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 23/209 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 133
Query: 132 CFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 134 AFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLRE 184
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 185 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 241
Query: 251 YTTAIDIWSAGCVVAELMLGK-PLFPGDS 278
Y+ DIWS G + E+ +G+ P+ P D+
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDA 270
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 127
+++GQGSFG VF K + + + KVL+ K R+ ++ ++HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--VKLYAYQIFRAL 185
L + F + E L L+L+++ R F +L++ + VK Y ++ AL
Sbjct: 90 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 244
++H S+G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 140 DHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKV-LGTP 293
+ +T + D WS G ++ E++ G F G + + I+K LG P
Sbjct: 198 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y ++ +G+G+F V A+ + TG VA+K + DK N RE++ M++L+H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L + E L LV+EY E +V H RM + QI
Sbjct: 74 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 123
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 124 VSAVQYCHQKY-IVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAA 181
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 132 CFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLRE 122
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 251 YTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQ 282
Y+ DIWS G + E+ +G+ P+ P D+ D
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 135/316 (42%), Gaps = 50/316 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLK 130
+G+G F F+ +T E A K V + K RE +M R L H +VV
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF- 104
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
H FF D ++ +VLE R + +K + + + Y QI Y+HR
Sbjct: 105 HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 157
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGAT 249
+ V HRD+K NL +N +VK+ DFG A KV GE + Y APE +
Sbjct: 158 N-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKK 214
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
++ +D+WS GC++ L++GKP F E C+ Y
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL--- 249
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP- 368
+IK + + PK + P A L+ ++LQ P R T + L FF P ARLP
Sbjct: 250 --RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPI 304
Query: 369 SGRFLPPLFNFKSHEL 384
+ +PP F+ L
Sbjct: 305 TCLTIPPRFSIAPSSL 320
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 135/316 (42%), Gaps = 50/316 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLK 130
+G+G F F+ +T E A K V + K RE +M R L H +VV
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF- 106
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
H FF D ++ +VLE R + +K + + + Y QI Y+HR
Sbjct: 107 HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGAT 249
+ V HRD+K NL +N +VK+ DFG A KV GE + Y APE +
Sbjct: 160 N-RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKK 216
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
++ +D+WS GC++ L++GKP F E C+ Y
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL--- 251
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP- 368
+IK + + PK + P A L+ ++LQ P R T + L FF P ARLP
Sbjct: 252 --RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPI 306
Query: 369 SGRFLPPLFNFKSHEL 384
+ +PP F+ L
Sbjct: 307 TCLTIPPRFSIAPSSL 322
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 136/297 (45%), Gaps = 47/297 (15%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 132
+G+GS G+V A+ +G VA+K + D R + R E+ MR H NVV +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK--MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ +EL++ ++E++ + +LN+ + + +AL+Y+H
Sbjct: 111 YLVG---EELWV--LMEFLQGGALTDIVSQVRLNEEQ----IATVCEAVLQALAYLHAQ- 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
GV HRDIK ++L+ +VKL DFG + K P + Y+ APE+I + Y
Sbjct: 161 GVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI-SRSLY 218
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 311
T +DIWS G +V E++ G+P + DS V + + ++ P P
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------------KRLRDSPP-------P 259
Query: 312 QIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP 368
++K HK+ P D + R+L P R TA + L HPF + P +P
Sbjct: 260 KLKNS--HKV-----SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVP 309
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 128 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 181
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
+ +RD+KP+NLL++ + +++ DFG AK VKG + + Y APE+I + Y
Sbjct: 182 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKG-ATWTLCGTPEYLAPEIIL-SKGYN 237
Query: 253 TAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 271
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 127
+++GQGSFG VF K + + + KVL+ K R+ ++ ++HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--VKLYAYQIFRAL 185
L H F T K L L+L+++ R F +L++ + VK Y ++ AL
Sbjct: 90 KL-HYAFQTEGK----LYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 244
++H S+G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 140 DHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKV-LGTP 293
+ +T + D WS G ++ E++ G F G + + I+K LG P
Sbjct: 198 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 127
+++GQGSFG VF K + + + KVL+ K R+ ++ ++HP +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--VKLYAYQIFRAL 185
L H F T K L L+L+++ R F +L++ + VK Y ++ AL
Sbjct: 91 KL-HYAFQTEGK----LYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 244
++H S+G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 141 DHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKV-LGTP 293
+ +T + D WS G ++ E++ G F G + + I+K LG P
Sbjct: 199 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFAEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 50/299 (16%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DH 123
++ +++G+GSFG VF A+ +T + AIK + +D + +++ TM R+L +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR 183
P L H F + K+ L+ V+EY+ ++ H + + + YA +I
Sbjct: 78 P---FLTHMFCTFQTKENLF--FVMEYL--NGGDLMYHIQSCH-KFDLSRATFYAAEIIL 129
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 242
L ++H S G+ +RD+K N+L++ H +K+ DFG K + G+ + C Y AP
Sbjct: 130 GLQFLH-SKGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
E++ G +Y ++D WS G ++ E+++G+ F G + I+ N
Sbjct: 188 EILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF------------HSIRMDN 234
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTAL-DALIHPFFDEL 360
P Y P+ + EA DL+ +L P R D HP F E+
Sbjct: 235 PFY-----------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 108 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 161
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 162 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 216
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADEPI-QIYEKI 250
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 134/310 (43%), Gaps = 50/310 (16%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLK 130
+G+G F F+ +T E A K V + K RE +M R L H +VV
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF- 80
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
H FF D ++ +VLE R + +K + + + Y QI Y+HR
Sbjct: 81 HGFFEDND----FVFVVLELCRR---RSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGAT 249
+ V HRD+K NL +N +VK+ DFG A KV GE + Y APE +
Sbjct: 134 N-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKK 190
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
++ +D+WS GC++ L++GKP F E C+ Y
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL--- 225
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP- 368
+IK + + PK + P A L+ ++LQ P R T + L FF P ARLP
Sbjct: 226 --RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPI 280
Query: 369 SGRFLPPLFN 378
+ +PP F+
Sbjct: 281 TCLTIPPRFS 290
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 94 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 147
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 148 DLIYRDLKPENLLIDEQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 202
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 128 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLH-SL 181
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 182 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 236
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 271
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
+ +RD+KP+NLL++ + +++ DFG AK VKG + Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWXLAGTPEYLAPEIIL-SKGYN 216
Query: 253 TAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 139/299 (46%), Gaps = 55/299 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DHPNVVS 128
R++G+GSFG V A+ ETG+ A+K + +D ++ +++ TM R+L +HP +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L C F T D+ L V+E+V ++ H K ++R + YA +I AL ++
Sbjct: 89 L-FCCFQTPDR----LFFVMEFV--NGGDLMFHIQK-SRRFDEARARFYAAEIISALMFL 140
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV-LVKGEPNISYICSRYYRAPELIFG 247
H G+ +RD+K N+L++ H KL DFG K + G ++ + Y APE I
Sbjct: 141 HDK-GIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE-ILQ 197
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTE 307
Y A+D W+ G ++ E++ G F ++ D L E I +E+
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI------LNDEV--------- 241
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDA------LIHPFFDEL 360
++P + +A ++ + +P +R +L L HPFF E+
Sbjct: 242 -------------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 23/209 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 132 CFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLRE 122
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 251 YTTAIDIWSAGCVVAELMLGK-PLFPGDS 278
Y+ DIWS G + E+ +G+ P+ P D+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 23/209 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 132 CFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLRE 122
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 250
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 251 YTTAIDIWSAGCVVAELMLGK-PLFPGDS 278
Y+ DIWS G + E+ +G+ P+ P D+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
+ +RD+KP+NLL++ + +++ DFG AK VKG + Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWXLXGTPEYLAPEIIL-SKGYN 216
Query: 253 TAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 102 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLH-SL 155
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 156 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 210
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 211 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 245
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 18/215 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 133
+G G+ GVVF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 134 FSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 93 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 143
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 144 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 200
Query: 253 TAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
DIWS G + E+ +G+ SG + E++
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 133
+G G+ GVVF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 134 FSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 253 TAIDIWSAGCVVAELMLGK-PLFPGDS 278
DIWS G + E+ +G+ P+ P D+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 133
+G G+ GVVF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 134 FSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 253 TAIDIWSAGCVVAELMLGK-PLFPGDS 278
DIWS G + E+ +G+ P+ P D+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 57/293 (19%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR-------LLDHPNVVSLK 130
++G+GSF V++A+ + TG VAIK + + YK +Q ++ L HP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 131 HCFFSTTDKDELYLNLVLEY-----VPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
+ F +D Y+ LVLE + + VK F++ R M +QI +
Sbjct: 78 NYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFM-------HQIITGM 125
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNISYICSRYYRAPEL 244
Y+H S G+ HRD+ NLL+ + +K+ DFG A L + E + + + Y +PE
Sbjct: 126 LYLH-SHGILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPE- 182
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
I + + D+WS GC+ L++G+P F D+ + L +++
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV----------------- 225
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
+++ P + EA DL+ +LL+ +P R + L HPF
Sbjct: 226 LADYEMPSF------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L + E L LV+EY E +V H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L + E L LV+EY E +V H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 149/317 (47%), Gaps = 68/317 (21%)
Query: 74 MAERIVGQGSFG-VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 128
++E+I+G GS G VVFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 72
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA-----YQIFR 183
++ TTD+ +L + LE + +V+ N ++ + + K Y QI
Sbjct: 73 -RYYCSETTDR---FLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 126
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNI 231
++++H S+ + HRD+KPQN+LV+ + ++ + DFG K L G+ +
Sbjct: 127 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 232 SYIC-----SRYYRAPELIFGATEYTT------AIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +RAPEL+ + T +IDI+S GCV +L K P
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKY 244
Query: 281 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQY 340
+ II+ G + +E+KC++ + + EA DL+S+++ +
Sbjct: 245 SRESNIIR--GIFSLDEMKCLHD--------------------RSLIAEATDLISQMIDH 282
Query: 341 SPNLRCTALDALIHPFF 357
P R TA+ L HP F
Sbjct: 283 DPLKRPTAMKVLRHPLF 299
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ ++ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPFFADQPI-QIYEKI 250
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 136/294 (46%), Gaps = 50/294 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DHPNVVS 128
+++G+GSFG VF A+ +T + AIK + +D + +++ TM R+L +HP
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP---F 80
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L H F + K+ L+ V+EY+ ++ H + + + YA +I L ++
Sbjct: 81 LTHMFCTFQTKENLF--FVMEYL--NGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFL 135
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 247
H S G+ +RD+K N+L++ H +K+ DFG K + G+ + C Y APE++ G
Sbjct: 136 H-SKGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTE 307
+Y ++D WS G ++ E+++G+ F G + I+ NP Y
Sbjct: 194 -QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF------------HSIRMDNPFY-- 238
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTAL-DALIHPFFDEL 360
P+ + EA DL+ +L P R D HP F E+
Sbjct: 239 ---------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NL+++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLIIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIII-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 62/300 (20%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSL 129
R +G GSFG V + G A+K + L+ + N E + ++ HP ++ +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 130 KHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
F +D + ++++Y+ E + K +QR P K YA ++ AL Y
Sbjct: 72 WGTF-----QDAQQIFMIMDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEY 121
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-ICSR-YYRAPELI 245
+H S + +RD+KP+N+L++ + H +K+ DFG AK + P+++Y +C Y APE++
Sbjct: 122 LH-SKDIIYRDLKPENILLDKNGH-IKITDFGFAKYV----PDVTYXLCGTPDYIAPEVV 175
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
Y +ID WS G ++ E++ G F DS + E K+L R
Sbjct: 176 -STKPYNKSIDWWSFGILIYEMLAGYTPF-YDSNTMKTYE--KILNAELR---------- 221
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLL-----QYSPNLRCTALDALIHPFFDEL 360
FP + DL+SRL+ Q NL+ D HP+F E+
Sbjct: 222 ----------------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 50/290 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLKHC 132
+G+G+F VV + + G+ A K + +D + RE + RLL HPN+V L H
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL-HD 88
Query: 133 FFSTTDKDELYLNLVL--EYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
S L +LV E + V R +++++ + + QI A+ + H+
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQILEAVLHCHQ 139
Query: 191 SIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIF 246
+GV HRD+KP+NLL+ VKL DFG A + V+GE + + Y +PE +
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VL 196
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
Y +D+W+ G ++ L++G P F D +L + IK
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQQIKA----------------G 239
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ FP + W + PEA DL++++L +P+ R TA +AL HP+
Sbjct: 240 AYDFPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPW 281
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------R 113
G + QP +Y + +G+G+F V A+ + TG VAIK + DK N R
Sbjct: 4 GSDEQP-HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFR 60
Query: 114 ELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPM 171
E++ M++L+HPN+V L + E L L++EY E +V H RM
Sbjct: 61 EVRIMKILNHPNIVKLFEVI-----ETEKTLYLIMEYASGGEVFDYLVAH-----GRMKE 110
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ QI A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G
Sbjct: 111 KEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLD 168
Query: 232 SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
++ S Y APEL G +D+WS G ++ L+ G F G +
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 154/357 (43%), Gaps = 77/357 (21%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKC-LETG--ETVAIKKVLQDKR--YKNRELQTMRLL 121
P+ + + E +G+G+F V+ A L+ G E +A+K ++ ELQ + +
Sbjct: 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 122 D-HPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQ 180
NV+ +K+CF + ++ + + Y+ + F + + V+ Y
Sbjct: 77 GGQDNVMGVKYCF-----RKNDHVVIAMPYLEH------ESFLDILNSLSFQEVREYMLN 125
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK----------VLVKGEP- 229
+F+AL IH+ G+ HRD+KP N L N + L DFG A+ V+ E
Sbjct: 126 LFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQ 184
Query: 230 ------NISYIC-SRY-----------YRAPELIFGATEYTTAIDIWSAGCVVAELMLGK 271
N IC SR +RAPE++ TTAID+WSAG + L+ G+
Sbjct: 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
Query: 272 -PLFPGDSGVDQLVEIIKVLGTPTREEIK-----------------------CMNPNYTE 307
P + + L +I+ + G +RE I+ C +
Sbjct: 245 YPFYKASDDLTALAQIMTIRG--SRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMD 302
Query: 308 FKFPQ----IKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDEL 360
P+ I+ H + +P EA DL+ +LL +P R TA +AL+HPFF ++
Sbjct: 303 SSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 26/230 (11%)
Query: 77 RIVGQGSFGVVFQAKCL---ETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVV 127
+++GQGSFG VF + + ++G A+K + ++D+ E + ++HP VV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--VKLYAYQIFRAL 185
L + F + E L L+L+++ R F +L++ + VK Y ++ L
Sbjct: 94 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 244
++H S+G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 144 DHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV 201
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKV-LGTP 293
+ ++ + D WS G ++ E++ G F G + + I+K LG P
Sbjct: 202 V-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 148/317 (46%), Gaps = 68/317 (21%)
Query: 74 MAERIVGQGSFG-VVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 128
++E+I+G GS G VVFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 72
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA-----YQIFR 183
++ TTD+ +L + LE + +V+ N ++ + + K Y QI
Sbjct: 73 -RYYCSETTDR---FLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 126
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNI 231
++++H S+ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 127 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 232 SYIC-----SRYYRAPELIFGATEYTT------AIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +RAPEL+ + T +IDI+S GCV +L K P
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKY 244
Query: 281 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQY 340
+ II+ G + +E+KC++ + + EA DL+S+++ +
Sbjct: 245 SRESNIIR--GIFSLDEMKCLHD--------------------RSLIAEATDLISQMIDH 282
Query: 341 SPNLRCTALDALIHPFF 357
P R TA+ L HP F
Sbjct: 283 DPLKRPTAMKVLRHPLF 299
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y + +G+G+F V A+ + TG+ VA++ + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L + E L LV+EY E +V H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L F + ++ L LV+EY E +V H RM + QI
Sbjct: 73 PNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G ++ + Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 137/290 (47%), Gaps = 50/290 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLKHC 132
+G+G+F VV + + TG+ A K + +D + RE + RLL HPN+V L H
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL-HD 70
Query: 133 FFSTTDKDELYLNLVL--EYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
S L +LV E + V R +++++ + + QI ++++ H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQILESVNHCHL 121
Query: 191 SIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIF 246
+ G+ HRD+KP+NLL+ + VKL DFG A + V+G+ + + Y +PE +
Sbjct: 122 N-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE-VL 178
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
Y +D+W+ G ++ L++G P F D +L + IK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPF-WDEDQHRLYQQIKA----------------G 221
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ FP + W + PEA DL++++L +P R TA +AL HP+
Sbjct: 222 AYDFPSPE---WDTV-----TPEAKDLINKMLTINPAKRITASEALKHPW 263
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP +I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPAIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y + +G+G+F V A+ + TG+ VA++ + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L + E L LV+EY E +V H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G + S Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDEFCGSPPYAA 180
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 50/297 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVA-----IKKVLQDKRYKNRELQTMRLLDHPNVV 127
YM +G+G FG+V +C+ET +K D+ +E+ + + H N++
Sbjct: 7 YMIAEDLGRGEFGIVH--RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L F S + L ++ E++ + R+ +LN+R + YV +Q+ AL
Sbjct: 65 HLHESFESMEE-----LVMIFEFISGLDIFERINTSAFELNEREIVSYV----HQVCEAL 115
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
++H S + H DI+P+N++ + +K+ +FG A+ L G+ + Y APE
Sbjct: 116 QFLH-SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE- 173
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ +TA D+WS G +V L+ G F ++ Q++E I MN
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI-------------MNAE 219
Query: 305 YT--EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
YT E F +I EA+D V RLL R TA +AL HP+ +
Sbjct: 220 YTFDEEAFKEI-------------SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 58/310 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 130 KHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
+ F D+ +YL +LE+ P +++ ++ + +++ +++ ++ AL Y
Sbjct: 80 YNYFH---DRKRIYL--MLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 130
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H V HRDIKP+NLL+ + ++K+ DFG + V + Y PE+I G
Sbjct: 131 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
T + +D+W AG + E ++G P F S + I+ V +
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 229
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP 368
KFP + + DL+S+LL+Y P R + HP+ +
Sbjct: 230 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPW--------VKAN 269
Query: 369 SGRFLPPLFN 378
S R LPP++
Sbjct: 270 SRRVLPPVYQ 279
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 137/290 (47%), Gaps = 50/290 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLKHC 132
+G+G+F VV + + TG+ A K + +D + RE + RLL HPN+V L H
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL-HD 70
Query: 133 FFSTTDKDELYLNLVL--EYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
S L +LV E + V R +++++ + + QI ++++ H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQILESVNHCHL 121
Query: 191 SIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIF 246
+ G+ HRD+KP+NLL+ + VKL DFG A + V+G+ + + Y +PE +
Sbjct: 122 N-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE-VL 178
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
Y +D+W+ G ++ L++G P F D +L + IK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPF-WDEDQHRLYQQIKA----------------G 221
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ FP + W + PEA DL++++L +P R TA +AL HP+
Sbjct: 222 AYDFPSPE---WDTV-----TPEAKDLINKMLTINPAKRITASEALKHPW 263
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 58/310 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 130 KHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
+ F D+ +YL +LE+ P +++ ++ + +++ +++ ++ AL Y
Sbjct: 81 YNYFH---DRKRIYL--MLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 131
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H V HRDIKP+NLL+ + ++K+ DFG + V + Y PE+I G
Sbjct: 132 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
T + +D+W AG + E ++G P F S + I+ V +
Sbjct: 189 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 230
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP 368
KFP + + DL+S+LL+Y P R + HP+ +
Sbjct: 231 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPW--------VKAN 270
Query: 369 SGRFLPPLFN 378
S R LPP++
Sbjct: 271 SRRVLPPVYQ 280
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 58/310 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 130 KHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
+ F D+ +YL +LE+ P +++ ++ + +++ +++ ++ AL Y
Sbjct: 80 YNYFH---DRKRIYL--MLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 130
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 248
H V HRDIKP+NLL+ + ++K+ DFG + V + Y PE+I G
Sbjct: 131 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
T + +D+W AG + E ++G P F S + I+ V +
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 229
Query: 309 KFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLP 368
KFP + + DL+S+LL+Y P R + HP+ +
Sbjct: 230 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPW--------VKAN 269
Query: 369 SGRFLPPLFN 378
S R LPP++
Sbjct: 270 SRRVLPPVYQ 279
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 79 VGQGSFGVVFQAKCLE---TGETVAIKKVLQDKRYKNRELQTMRLLD-----HPNVVSLK 130
+G+G+FG V Q C++ G VA+K + ++YK + +L+ P+ +L
Sbjct: 41 LGEGTFGRVVQ--CVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLC 98
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F D ++ + E + + +K N L P+ V+ A+Q+ +A+ ++H
Sbjct: 99 VQMFDWFDY-HGHMCISFELLGLSTFDFLKDNNYLP--YPIHQVRHMAFQLCQAVKFLHD 155
Query: 191 SIGVCHRDIKPQNLLVNPHTHQ------------------VKLCDFGSAKVLVKGEPNIS 232
+ + H D+KP+N+L ++ V++ DFGSA E + +
Sbjct: 156 N-KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF--DHEHHST 212
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLG- 291
+ +R+YRAPE+I ++ D+WS GC++ E +G LF + L + ++LG
Sbjct: 213 IVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGP 271
Query: 292 TPTREEIKC------------MNPNYTEFKFPQIKAHPWHKIFPKRMPP--EAVDLVSRL 337
P+R K + N + ++ + P + + DL+ +
Sbjct: 272 IPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESM 331
Query: 338 LQYSPNLRCTALDALIHPFFDELRD--PNARLPSGR 371
L+Y P R T +AL HPFF LR PN S R
Sbjct: 332 LEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSSR 367
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 69/385 (17%)
Query: 19 TVGVDKLPEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERI 78
+ GVD E + ++ K +V D + GH+ V IG ++ ER
Sbjct: 8 SSGVDLGTENLYFQSMQSSKRSSRSVED---DKEGHL-VCRIG----------DWLQERY 53
Query: 79 -----VGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V +CL+ VA+K + +Y+ + +L +
Sbjct: 54 EIVGNLGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 111
Query: 131 HCFFSTTDKDEL----YLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+ F D ++ + E + + +K N Q P+ +V+ AYQ+ AL
Sbjct: 112 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALR 169
Query: 187 YIHRSIGVCHRDIKPQNLLV---------NPHTH---------QVKLCDFGSAKVLVKGE 228
++H + + H D+KP+N+L N H +++ DFGSA E
Sbjct: 170 FLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHE 226
Query: 229 PNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
+ + + +R+YR PE+I + D+WS GC++ E G LF + LV + K
Sbjct: 227 HHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 285
Query: 289 VLG-------TPTREEIK------CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAV---D 332
+LG TR++ + N ++ ++ + P K + + E V D
Sbjct: 286 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFD 344
Query: 333 LVSRLLQYSPNLRCTALDALIHPFF 357
L+ R+L++ P R T +AL+HPFF
Sbjct: 345 LMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 17/216 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 132
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
FS D LY+ V+EYV + H ++ R + + YA QI Y+H S+
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 251
+ +RD+KP+NLL++ + +++ DFG AK VKG +C APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEALAPEIIL-SKGY 215
Query: 252 TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
A+D W+ G ++ E+ G P F D + Q+ E I
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y + +G+G+F V A+ + TG VAIK + DK N RE++ M++L+H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L + E L L++EY E +V H RM + QI
Sbjct: 74 PNIVKLFEVI-----ETEKTLYLIMEYASGGEVFDYLVAH-----GRMKEKEARSKFRQI 123
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G ++ + Y A
Sbjct: 124 VSAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 123/292 (42%), Gaps = 44/292 (15%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 127
Y ++G G+F V A+ T + VAIK K L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVV-KHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + S LYL + L E R+V K F +I+ Q+ A+
Sbjct: 80 ALDDIYESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVK 130
Query: 187 YIHRSIGVCHRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
Y+H +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y APE
Sbjct: 131 YLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE- 188
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ Y+ A+D WS G + L+ G P F ++ +I+K
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA--------------- 233
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
EF P W I A D + L++ P R T AL HP+
Sbjct: 234 EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 57 VTTIGGRNGQPKQTISYMAERI-----VGQGSFGVVFQAKCLETGETVAIKKVLQ--DKR 109
+ + G P+Q + AE + +G+G++G V + +G+ +A+K++ D++
Sbjct: 3 IESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK 62
Query: 110 YKNRELQ----TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKH-FNK 164
+ + L MR D P +V F D + +E + + + K+ ++
Sbjct: 63 EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD-----CWICMELMSTSFDKFYKYVYSV 117
Query: 165 LNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 224
L+ +P + +AL+++ ++ + HRDIKP N+L++ + +KLCDFG + L
Sbjct: 118 LDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQL 176
Query: 225 VKGEPNISYICSRYYRAPELIFGATE---YTTAIDIWSAGCVVAELMLGKPLFP-GDSGV 280
V R Y APE I + Y D+WS G + EL G+ +P +S
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF 236
Query: 281 DQLVEIIKVLGTP---TREEIKCMNPNYTEF-------------KFPQIKAHPWHKIFPK 324
DQL +++K G P + E + +P++ F K+ ++ HP+ ++ +
Sbjct: 237 DQLTQVVK--GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294
Query: 325 R 325
R
Sbjct: 295 R 295
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L F + ++ L LV+EY E +V H M + QI
Sbjct: 66 PNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAH-----GWMKEKEARAKFRQI 115
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 116 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAA 173
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 133
+G G+ GVVF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 134 FSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+S + +++ +E++ ++ +V+K R+P + + + + L+Y+
Sbjct: 77 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 127
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
+ HRD+KP N+LVN ++KLCDFG + L+ N ++ +R Y +PE + G T Y+
Sbjct: 128 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDEMAN-EFVGTRSYMSPERLQG-THYS 184
Query: 253 TAIDIWSAGCVVAELMLGK 271
DIWS G + E+ +G+
Sbjct: 185 VQSDIWSMGLSLVEMAVGR 203
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 50/320 (15%)
Query: 79 VGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G+FG V +CL+ VA+K + +Y+ + +L ++ F
Sbjct: 36 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 93
Query: 136 TTDKDEL----YLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
D ++ + E + + +K N Q P+ +V+ AYQ+ AL ++H +
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN 151
Query: 192 IGVCHRDIKPQNLLV---------NPHTH---------QVKLCDFGSAKVLVKGEPNISY 233
+ H D+KP+N+L N H +++ DFGSA E + +
Sbjct: 152 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 208
Query: 234 ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLG-- 291
+ +R+YR PE+I + D+WS GC++ E G LF + LV + K+LG
Sbjct: 209 VATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 267
Query: 292 -----TPTREEIK------CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAV---DLVSRL 337
TR++ + N ++ ++ + P K + + E V DL+ R+
Sbjct: 268 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRM 326
Query: 338 LQYSPNLRCTALDALIHPFF 357
L++ P R T +AL+HPFF
Sbjct: 327 LEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 50/320 (15%)
Query: 79 VGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G+FG V +CL+ VA+K + +Y+ + +L ++ F
Sbjct: 27 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 84
Query: 136 TTDKDEL----YLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
D ++ + E + + +K N Q P+ +V+ AYQ+ AL ++H +
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN 142
Query: 192 IGVCHRDIKPQNLLV---------NPHTH---------QVKLCDFGSAKVLVKGEPNISY 233
+ H D+KP+N+L N H +++ DFGSA E + +
Sbjct: 143 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 199
Query: 234 ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLG-- 291
+ +R+YR PE+I + D+WS GC++ E G LF + LV + K+LG
Sbjct: 200 VATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 258
Query: 292 -----TPTREEIK------CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAV---DLVSRL 337
TR++ + N ++ ++ + P K + + E V DL+ R+
Sbjct: 259 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRM 317
Query: 338 LQYSPNLRCTALDALIHPFF 357
L++ P R T +AL+HPFF
Sbjct: 318 LEFDPAQRITLAEALLHPFF 337
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 48/297 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL---QTMRLL-----DHPNVVS 128
R++G+GS+ V + +T A+K V ++ + ++ QT + + +HP +V
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L CF + E L V+EYV ++ H + +++P + + Y+ +I AL+Y+
Sbjct: 86 LHSCF-----QTESRLFFVIEYV--NGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYL 137
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 247
H G+ +RD+K N+L++ H +KL D+G K ++ S C Y APE++ G
Sbjct: 138 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY-T 306
+Y ++D W+ G ++ E+M G+ F ++G+ NP+ T
Sbjct: 196 E-DYGFSVDWWALGVLMFEMMAGRSPF-------------DIVGSSD-------NPDQNT 234
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTAL------DALIHPFF 357
E Q+ +I P+ M +A ++ L P R L D HPFF
Sbjct: 235 EDYLFQVILEKQIRI-PRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF 290
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 50/290 (17%)
Query: 79 VGQGSFGVVFQ-AKCLETGETVAI-----KKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 132
+G+G+F VV + K L E A+ K +D + RE + RLL HPN+V L H
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRL-HD 77
Query: 133 FFSTTDKDELYLNLVL--EYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
S L +LV E + V R +++++ + + QI A+ + H+
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQILEAVLHCHQ 128
Query: 191 SIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIF 246
+GV HR++KP+NLL+ VKL DFG A + V+GE + + Y +PE +
Sbjct: 129 -MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VL 185
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
Y +D+W+ G ++ L++G P F D +L + IK
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQQIKA----------------G 228
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ FP + W + PEA DL++++L +P+ R TA +AL HP+
Sbjct: 229 AYDFPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPW 270
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 65/300 (21%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 126
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 72
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+LK+ F T D+ L V+EY E + + +R + Y +I A
Sbjct: 73 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 122
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 243
L Y+H S V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 123 LEYLH-SRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
+ +Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 181 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM------EEIR--- 228
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR-----CTALDALIHPFF 357
FP+ + PEA L++ LL+ P R A + + H FF
Sbjct: 229 -------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 125/292 (42%), Gaps = 44/292 (15%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 127
Y ++G G+F V A+ T + VAIK + L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVV-KHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + S LYL + L E R+V K F +I+ Q+ A+
Sbjct: 80 ALDDIYESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVK 130
Query: 187 YIHRSIGVCHRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
Y+H +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y APE
Sbjct: 131 YLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE- 188
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ Y+ A+D WS G + L+ G P F ++ +I+K
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK---------------- 232
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
E++F + W I A D + L++ P R T AL HP+
Sbjct: 233 -AEYEF---DSPYWDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 65/300 (21%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 126
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+LK+ F T D+ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 243
L Y+H S V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLH-SRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
+ +Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM------EEIR--- 223
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR-----CTALDALIHPFF 357
FP+ + PEA L++ LL+ P R A + + H FF
Sbjct: 224 -------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 65/300 (21%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 126
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+LK+ F T D+ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 243
L Y+H S V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLH-SRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
+ +Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM------EEIR--- 223
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR-----CTALDALIHPFF 357
FP+ + PEA L++ LL+ P R A + + H FF
Sbjct: 224 -------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 123/292 (42%), Gaps = 44/292 (15%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 127
Y ++G G+F V A+ T + VAIK + L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVV-KHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + S LYL + L E R+V K F +I+ Q+ A+
Sbjct: 80 ALDDIYESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVK 130
Query: 187 YIHRSIGVCHRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
Y+H +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y APE
Sbjct: 131 YLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE- 188
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ Y+ A+D WS G + L+ G P F ++ +I+K
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA--------------- 233
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
EF P W I A D + L++ P R T AL HP+
Sbjct: 234 EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 65/300 (21%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 126
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+LK+ F T D+ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 243
L Y+H S V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLH-SRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
+ +Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM------EEIR--- 223
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR-----CTALDALIHPFF 357
FP+ + PEA L++ LL+ P R A + + H FF
Sbjct: 224 -------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 65/300 (21%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 126
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+LK+ F T D+ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 243
L Y+H S V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLH-SRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
+ +Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM------EEIR--- 223
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR-----CTALDALIHPFF 357
FP+ + PEA L++ LL+ P R A + + H FF
Sbjct: 224 -------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR-----ELQT 117
R+ P + + E +G G+FG V++AK ETG +A KV++ K + E++
Sbjct: 5 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 61
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
+ DHP +V L ++ L +++E+ P + +L++ + +++
Sbjct: 62 LATCDHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAI--MLELDRGLTEPQIQVV 114
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICS 236
Q+ AL+++H S + HRD+K N+L+ ++L DFG SAK L + S+I +
Sbjct: 115 CRQMLEALNFLH-SKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGT 172
Query: 237 RYYRAPELI----FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y+ APE++ T Y DIWS G + E+ +P
Sbjct: 173 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP-------------------- 212
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
P E +NP K K+ P + P + E D + L +P R +A L
Sbjct: 213 PHHE----LNPMRVLLKIA--KSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLL 266
Query: 353 IHPFFDELRDPNA 365
HPF + A
Sbjct: 267 EHPFVSSITSNKA 279
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 65/300 (21%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 126
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 70
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+LK+ F T D+ L V+EY E + + +R + Y +I A
Sbjct: 71 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 120
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 243
L Y+H S V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 121 LEYLH-SRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
+ +Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 179 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM------EEIR--- 226
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR-----CTALDALIHPFF 357
FP+ + PEA L++ LL+ P R A + + H FF
Sbjct: 227 -------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNVVSLKHC 132
++G G+F V A+ T + VAIK + L+ K E+ + + HPN+V+L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVV-KHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ S LYL + L E R+V K F +I+ Q+ A+ Y+H
Sbjct: 85 YESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVKYLH-D 134
Query: 192 IGVCHRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 249
+G+ HRD+KP+NLL ++ + DFG +K+ G + + Y APE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQK 193
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
Y+ A+D WS G + L+ G P F ++ +I+K EF
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA---------------EYEFD 238
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
P W I A D + L++ P R T AL HP+
Sbjct: 239 SPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 43/238 (18%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHP 124
Y +++G+G+FG V + T + A+K + + D + E M + P
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
VV L + F +D+ YL +V+EY+P + V+ + N +P + + Y ++
Sbjct: 130 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMS------NYDVPEKWARFYTAEVV 178
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNIS 232
AL IH S+G HRD+KP N+L++ H +KL DFG+ + K G P+
Sbjct: 179 LALDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD-- 234
Query: 233 YICSRYYRAPELI---FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y +PE++ G Y D WS G + E+++G F DS V +I+
Sbjct: 235 ------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 27/230 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHP 124
Y +++G+G+FG V + + + A+K + + D + E M + P
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
VV L C F +D+ YL +V+EY+P + V+ + N +P + K Y ++
Sbjct: 136 WVVQL-FCAF----QDDKYLYMVMEYMPGGDLVNLMS------NYDVPEKWAKFYTAEVV 184
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNI-SYICSRYYR 240
AL IH S+G+ HRD+KP N+L++ H H +KL DFG+ K+ G + + + + Y
Sbjct: 185 LALDAIH-SMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMKMDETGMVHCDTAVGTPDYI 242
Query: 241 APELI---FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+PE++ G Y D WS G + E+++G F DS V +I+
Sbjct: 243 SPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 65/300 (21%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 126
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+LK+ F T D+ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 243
L Y+H S V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLH-SRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
+ +Y A+D W G V+ E+M G+ P + D ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM------EEIR--- 223
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR-----CTALDALIHPFF 357
FP+ + PEA L++ LL+ P R A + + H FF
Sbjct: 224 -------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR-----ELQT 117
R+ P + + E +G G+FG V++AK ETG +A KV++ K + E++
Sbjct: 13 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 69
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
+ DHP +V L ++ L +++E+ P + +L++ + +++
Sbjct: 70 LATCDHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAI--MLELDRGLTEPQIQVV 122
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICS 236
Q+ AL+++H S + HRD+K N+L+ ++L DFG SAK L + S+I +
Sbjct: 123 CRQMLEALNFLH-SKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGT 180
Query: 237 RYYRAPELI----FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y+ APE++ T Y DIWS G + E+ +P
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP-------------------- 220
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
P E +NP K K+ P + P + E D + L +P R +A L
Sbjct: 221 PHHE----LNPMRVLLKIA--KSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLL 274
Query: 353 IHPFFDELRDPNA 365
HPF + A
Sbjct: 275 EHPFVSSITSNKA 287
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 43/238 (18%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHP 124
Y +++G+G+FG V + T + A+K + + D + E M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
VV L + F +D+ YL +V+EY+P + V+ + N +P + + Y ++
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMS------NYDVPEKWARFYTAEVV 183
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNIS 232
AL IH S+G HRD+KP N+L++ H +KL DFG+ + K G P+
Sbjct: 184 LALDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD-- 239
Query: 233 YICSRYYRAPELI---FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y +PE++ G Y D WS G + E+++G F DS V +I+
Sbjct: 240 ------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 130/304 (42%), Gaps = 48/304 (15%)
Query: 79 VGQGSFGVVFQAKCLE--TGETVAIKKVLQ----DKRYKNRELQTMRLLDHPNVVSLKHC 132
+G G+FGVV +C+E TG K + DK E+ M L HP +++L
Sbjct: 59 LGSGAFGVVH--RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 133 FFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F +D+ + L+LE++ E R+ K+++ + Y++ Q L ++H
Sbjct: 117 F-----EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR----QACEGLKHMHE 167
Query: 191 SIGVCHRDIKPQNLLV-NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 249
+ H DIKP+N++ VK+ DFG A L E + + APE++
Sbjct: 168 H-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV-DRE 225
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
D+W+ G + L+ G F G+ ++ L + +K + + E
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL------------QNVKRCDWEFDEDA 273
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFD-ELRDPNARLP 368
F + PEA D + LLQ P R T DAL HP+ + + +R+P
Sbjct: 274 FSSVS-------------PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIP 320
Query: 369 SGRF 372
S R+
Sbjct: 321 SSRY 324
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 31/228 (13%)
Query: 77 RIVGQGSFGVVFQAKCL---ETGETVAIK--------KVLQDKRYKNRELQTMRLLDHPN 125
R++G+G +G VFQ + + TG+ A+K + +D + E + + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVK----LYAYQI 181
+V L + F T K L L+LEY+ + F +L + I+++ Y +I
Sbjct: 83 IVDLIYAF-QTGGK----LYLILEYLSGG-----ELFMQLEREG--IFMEDTACFYLAEI 130
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV-KGEPNISYICSRYYR 240
AL ++H+ G+ +RD+KP+N+++N H VKL DFG K + G ++ + Y
Sbjct: 131 SMALGHLHQK-GIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 241 APELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
APE++ + + A+D WS G ++ +++ G P F G++ + +I+K
Sbjct: 189 APEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 43/238 (18%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHP 124
Y +++G+G+FG V + T + A+K + + D + E M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
VV L + F +D+ YL +V+EY+P + V+ + N +P + + Y ++
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMS------NYDVPEKWARFYTAEVV 183
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNIS 232
AL IH S+G HRD+KP N+L++ H +KL DFG+ + K G P+
Sbjct: 184 LALDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD-- 239
Query: 233 YICSRYYRAPELI---FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y +PE++ G Y D WS G + E+++G F DS V +I+
Sbjct: 240 ------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 70 TISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDH 123
T Y +G+G+F VV + L TG A K + +D + RE + RLL H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVL--EYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
N+V L H S L +LV E + V R +++++ + + QI
Sbjct: 63 SNIVRL-HDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQI 112
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSR 237
A+ + H+ +GV HRD+KP+NLL+ VKL DFG A + V+G+ + +
Sbjct: 113 LEAVLHCHQ-MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTP 170
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
Y +PE + Y +DIW+ G ++ L++G P F D +L + IK
Sbjct: 171 GYLSPE-VLRKEAYGKPVDIWACGVILYILLVGYPPF-WDEDQHKLYQQIKA-------- 220
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ FP + W + PEA +L++++L +P R TA +AL HP+
Sbjct: 221 --------GAYDFP---SPEWDTV-----TPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL---QTMRLL-----DHPNVVS 128
R++G+GS+ V + +T A+K V ++ + ++ QT + + +HP +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L CF + E L V+EYV ++ H + +++P + + Y+ +I AL+Y+
Sbjct: 75 LHSCF-----QTESRLFFVIEYV--NGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYL 126
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 247
H G+ +RD+K N+L++ H +KL D+G K ++ S C Y APE++ G
Sbjct: 127 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLF 274
+Y ++D W+ G ++ E+M G+ F
Sbjct: 185 E-DYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 59/324 (18%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL---------- 121
+ RI+G+G FG V+ + +TG+ A+ K L KR K ++ +T+ L
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 122 -DHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKH--FNKLNQRMPMIYVKLYA 178
D P +V + + F T DK L+L+ + + + +H F++ + R YA
Sbjct: 248 GDCPFIVCMSYA-FHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMR-------FYA 297
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
+I L ++H V +RD+KP N+L++ H H V++ D G A K +P+ S + +
Sbjct: 298 AEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 354
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPG---------------------D 277
Y APE++ Y ++ D +S GC++ +L+ G F D
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 414
Query: 278 SGVDQLVEIIK-VLGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFPKRMPPEAVDLVS 335
S +L +++ +L + C+ E K P ++ W +F ++ PP +
Sbjct: 415 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI---- 470
Query: 336 RLLQYSPNLRCTALDALIHPFFDE 359
P A DA FDE
Sbjct: 471 -----PPRGEVNAADAFDIGSFDE 489
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 134/283 (47%), Gaps = 44/283 (15%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 129
R +G+GSFG V + +T + A+K K ++ +N +ELQ M+ L+HP +V+L
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVK--HFNKLNQRMPMIYVKLYAYQIFRALSY 187
++S D++++++ + L + + + + HF + VKL+ ++ AL Y
Sbjct: 81 ---WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET-------VKLFICELVMALDY 130
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
+ + HRD+KP N+L++ H H V + DF A +L + + ++ Y APE+
Sbjct: 131 LQNQ-RIIHRDMKPDNILLDEHGH-VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS 188
Query: 248 --ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTP--------TREE 297
Y+ A+D WS G EL+ G+ + S EI+ T ++E
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVVTYPSAWSQEM 247
Query: 298 I----KCMNPN----YTEF----KFPQIKAHPWHKIFPKRMPP 328
+ K + PN +++ FP + W +F KR+ P
Sbjct: 248 VSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIP 290
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 31/228 (13%)
Query: 77 RIVGQGSFGVVFQAKCL---ETGETVAIK--------KVLQDKRYKNRELQTMRLLDHPN 125
R++G+G +G VFQ + + TG+ A+K + +D + E + + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVK----LYAYQI 181
+V L + F T K L L+LEY+ + F +L + I+++ Y +I
Sbjct: 83 IVDLIYAF-QTGGK----LYLILEYLSGG-----ELFMQLEREG--IFMEDTACFYLAEI 130
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YR 240
AL ++H+ G+ +RD+KP+N+++N H VKL DFG K + C Y
Sbjct: 131 SMALGHLHQK-GIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYM 188
Query: 241 APELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
APE++ + + A+D WS G ++ +++ G P F G++ + +I+K
Sbjct: 189 APEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL---QTMRLL-----DHPNVVS 128
R++G+GS+ V + +T A+K V ++ + ++ QT + + +HP +V
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L CF + E L V+EYV ++ H + +++P + + Y+ +I AL+Y+
Sbjct: 71 LHSCF-----QTESRLFFVIEYV--NGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYL 122
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 247
H G+ +RD+K N+L++ H +KL D+G K ++ S C Y APE++ G
Sbjct: 123 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLF 274
+Y ++D W+ G ++ E+M G+ F
Sbjct: 181 E-DYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 59/324 (18%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL---------- 121
+ RI+G+G FG V+ + +TG+ A+ K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 122 -DHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKH--FNKLNQRMPMIYVKLYA 178
D P +V + + F T DK L+L+ + + + +H F++ + R YA
Sbjct: 249 GDCPFIVCMSYA-FHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMR-------FYA 298
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
+I L ++H V +RD+KP N+L++ H H V++ D G A K +P+ S + +
Sbjct: 299 AEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPG---------------------D 277
Y APE++ Y ++ D +S GC++ +L+ G F D
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
Query: 278 SGVDQLVEIIK-VLGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFPKRMPPEAVDLVS 335
S +L +++ +L + C+ E K P ++ W +F ++ PP +
Sbjct: 416 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI---- 471
Query: 336 RLLQYSPNLRCTALDALIHPFFDE 359
P A DA FDE
Sbjct: 472 -----PPRGEVNAADAFDIGSFDE 490
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 59/324 (18%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL---------- 121
+ RI+G+G FG V+ + +TG+ A+ K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 122 -DHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKH--FNKLNQRMPMIYVKLYA 178
D P +V + + F T DK L+L+ + + + +H F++ + R YA
Sbjct: 249 GDCPFIVCMSYA-FHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMR-------FYA 298
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
+I L ++H V +RD+KP N+L++ H H V++ D G A K +P+ S + +
Sbjct: 299 AEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPG---------------------D 277
Y APE++ Y ++ D +S GC++ +L+ G F D
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
Query: 278 SGVDQLVEIIK-VLGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFPKRMPPEAVDLVS 335
S +L +++ +L + C+ E K P ++ W +F ++ PP +
Sbjct: 416 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI---- 471
Query: 336 RLLQYSPNLRCTALDALIHPFFDE 359
P A DA FDE
Sbjct: 472 -----PPRGEVNAADAFDIGSFDE 490
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 59/324 (18%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL---------- 121
+ RI+G+G FG V+ + +TG+ A+ K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 122 -DHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKH--FNKLNQRMPMIYVKLYA 178
D P +V + + F T DK L+L+ + + + +H F++ + R YA
Sbjct: 249 GDCPFIVCMSYA-FHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMR-------FYA 298
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
+I L ++H V +RD+KP N+L++ H H V++ D G A K +P+ S + +
Sbjct: 299 AEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPG---------------------D 277
Y APE++ Y ++ D +S GC++ +L+ G F D
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
Query: 278 SGVDQLVEIIK-VLGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFPKRMPPEAVDLVS 335
S +L +++ +L + C+ E K P ++ W +F ++ PP +
Sbjct: 416 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI---- 471
Query: 336 RLLQYSPNLRCTALDALIHPFFDE 359
P A DA FDE
Sbjct: 472 -----PPRGEVNAADAFDIGSFDE 490
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 136/308 (44%), Gaps = 60/308 (19%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 129
R +G+G FG V+ A+ ++ VA+K + + + K RE++ L HPN++ L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 130 KHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
+ F+ D+ +YL +LEY P E + K QR I +L AL Y
Sbjct: 89 YNYFY---DRRRIYL--ILEYAPRGELYKELQKSCTFDEQRTATIMEELAD-----ALMY 138
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 247
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 139 CH-GKKVIHRDIKPENLLLG-LKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTE 307
+ +D+W G + EL++G P F S + I+KV ++K
Sbjct: 196 RM-HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-------DLK-------- 239
Query: 308 FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARL 367
FP +P A DL+S+LL+++P+ R HP+ R
Sbjct: 240 --------------FPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPW--------VRA 277
Query: 368 PSGRFLPP 375
S R LPP
Sbjct: 278 NSRRVLPP 285
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSLKHCFFS 135
+G G+FGV + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 136 TTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T +L +V+EY E R+ R + + Q+ +SY H ++
Sbjct: 86 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCH-AMQ 134
Query: 194 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
VCHRD+K +N L++ ++K+CDFG +K V S + + Y APE++
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 194
Query: 253 TAIDIWSAGCVVAELMLG 270
D+WS G + +++G
Sbjct: 195 KVADVWSCGVTLYVMLVG 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 135
+G G+FGV + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 136 TTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T +L +V+EY E R+ R + + Q+ +SY H ++
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCH-AMQ 135
Query: 194 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
VCHRD+K +N L++ ++K+CDFG +K V S + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 253 TAIDIWSAGCVVAELMLG 270
D+WS G + +++G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 156/358 (43%), Gaps = 70/358 (19%)
Query: 34 IRDDKEMEATVV-------DGNGTETGHIIVTTIGGRNGQPKQTIS------YMAERIVG 80
+RDD A ++ D T ++ ++G + P + Y + ++G
Sbjct: 44 LRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIG 103
Query: 81 QGSFGVV-----------FQAKCLE-TGETVAIKKVLQDKRYKNRELQTMR-LLDHPNVV 127
+G VV F K +E T E ++ +++ + + RE +R + HP+++
Sbjct: 104 RGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII 163
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--VKLYAYQIFRAL 185
+L + S++ ++ LV + + R + F+ L +++ + + + A+
Sbjct: 164 TLIDSYESSS-----FMFLVFDLM-----RKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
S++H + + HRD+KP+N+L++ + Q++L DFG + L GE + Y APE++
Sbjct: 214 SFLHAN-NIVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL 271
Query: 246 FGATE-----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKC 300
+ + Y +D+W+ G ++ L+ G P F + L I
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI-------------- 317
Query: 301 MNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFD 358
M Y +F P+ W DL+SRLLQ P R TA AL HPFF+
Sbjct: 318 MEGQY-QFSSPE-----WDD-----RSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 29/240 (12%)
Query: 48 NGTETGHIIVTTIGGRNGQPK-QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQ 106
+G +TG++ TIGG+ Q + + + E +G G+ G V++ + +TG +A+K++
Sbjct: 6 SGKQTGYL---TIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQM-- 58
Query: 107 DKRYKNRELQTMRLLDHPNVVSLKH-------CFFSTTDKDELYLNLVLEYVPETVHRVV 159
+R N+E + R+L +VV H CF + ++++ +E + ++
Sbjct: 59 -RRSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI--AMELMGTCAEKLK 114
Query: 160 KHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG 219
K ++ +P + I +AL Y+ GV HRD+KP N+L++ Q+KLCDFG
Sbjct: 115 K---RMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-QIKLCDFG 170
Query: 220 SAKVLVKGEPNISYICSRYYRAPELIF----GATEYTTAIDIWSAGCVVAELMLGKPLFP 275
+ LV + Y APE I +Y D+WS G + EL G+ FP
Sbjct: 171 ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FP 228
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 38/299 (12%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 135
+G G+FGV + T E VA+K + + RE+ R L HPN+V K +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 136 TTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T +L +++EY E R+ R + + Q+ +SY H S+
Sbjct: 88 PT-----HLAIIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCH-SMQ 136
Query: 194 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
+CHRD+K +N L++ ++K+CDFG +K V S + + Y APE++ EY
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-RQEYD 195
Query: 253 TAI-DIWSAGCVVAELMLG-----KPLFPGD--SGVDQLVEIIKVLGTPTREEIKC---- 300
I D+WS G + +++G P P D + +++ + + R +C
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI 255
Query: 301 ----MNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS-PNLRCTALDALIH 354
+ T P+IK H W F K +P + ++ + Q+ P +LD ++
Sbjct: 256 SRIFVADPATRISIPEIKTHSW---FLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQ 311
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 109/207 (52%), Gaps = 20/207 (9%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVA---IKKVLQDKRYKNRELQTMRLL-----DHPNVVS 128
R++G+GS+ V + +T A +KK L + +QT + + +HP +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L CF + E L V+EYV ++ H + +++P + + Y+ +I AL+Y+
Sbjct: 118 LHSCF-----QTESRLFFVIEYV--NGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYL 169
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK-GEPNISYICSRYYRAPELIFG 247
H G+ +RD+K N+L++ H +KL D+G K ++ G+ ++ + Y APE++ G
Sbjct: 170 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 248 ATEYTTAIDIWSAGCVVAELMLGKPLF 274
+Y ++D W+ G ++ E+M G+ F
Sbjct: 228 E-DYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 65 GQPKQTISYMAER-----IVGQGSFGVVFQAKCLETGETVAIKKVLQDK--------RYK 111
G T S++++R I+G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 112 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
RE Q L+HP +V++ + T L +V+EYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
I V A Q AL++ H++ G+ HRD+KP N+L++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQN-GIIHRDVKPANILISA-TNAVKVVDFGIARAIADSGNSV 173
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ I + Y +PE G + + D++S GCV+ E++ G+P F GDS V
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 77 RIVGQGSFGVVFQAK--------CLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVS 128
+++G+GSFG V A+ ++ + AI K ++K + ++ + HP +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 129 LKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
L H F T DK L VL+Y+ E + + + L R + YA +I AL
Sbjct: 104 L-HFSFQTADK----LYFVLDYINGGELFYHLQRERCFLEPR-----ARFYAAEIASALG 153
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 245
Y+H S+ + +RD+KP+N+L++ H V L DFG K ++ S C Y APE +
Sbjct: 154 YLH-SLNIVYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFCGTPEYLAPE-V 210
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLF 274
Y +D W G V+ E++ G P F
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 29/210 (13%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCF 133
++G+G FG + ETGE + +K+++ + +R +E++ MR L+HPNV+ F
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK----F 72
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
KD+ LN + EY+ R + ++ + P +A I ++Y+H S+
Sbjct: 73 IGVLYKDK-RLNFITEYIKGGTLRGI--IKSMDSQYPWSQRVSFAKDIASGMAYLH-SMN 128
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPN-------------ISYICSRY 238
+ HRD+ N LV + + V + DFG A+++V K +P + + + Y
Sbjct: 129 IIHRDLNSHNCLVRENKNVV-VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELM 268
+ APE+I G + Y +D++S G V+ E++
Sbjct: 188 WMAPEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 34/216 (15%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR----ELQTMRLLD-HPNVVSLKH 131
R++ +G F V++A+ + +G A+K++L ++ KNR E+ M+ L HPN+V
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF-- 91
Query: 132 CFFSTTDKDELYLNLVLEYVPET---VHRVVKHFNKLNQRMPM---IYVKLYAYQIFRAL 185
C ++ K+E E++ T ++V+ K+ R P+ +K++ YQ RA+
Sbjct: 92 CSAASIGKEESDTGQA-EFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF-YQTCRAV 149
Query: 186 SYIHRSI-GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------- 237
++HR + HRD+K +NLL++ + +KLCDFGSA + P+ S+ R
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATT-ISHYPDYSWSAQRRALVEEE 207
Query: 238 -------YYRAPELIFGATEYTTA--IDIWSAGCVV 264
YR PE+I + + DIW+ GC++
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 21/219 (9%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 130
++G+GSFG V A T E AIK + +D ++ +++ + LLD P ++
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSYIH 189
H F T D+ L V+EYV ++ H ++ + + P YA +I L ++H
Sbjct: 86 HSCFQTVDR----LYFVMEYV--NGGDLMYHIQQVGKFKEPQ--AVFYAAEISIGLFFLH 137
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV-LVKGEPNISYICSRYYRAPELIFGA 248
+ G+ +RD+K N++++ H +K+ DFG K ++ G + + Y APE+I
Sbjct: 138 KR-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-AY 194
Query: 249 TEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y ++D W+ G ++ E++ G+P F G+ D+L + I
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 128/309 (41%), Gaps = 57/309 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL-------DHPNVVSL 129
+++G+G+F V K +TG+ A+K + + K E+ R D + L
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F +DE YL LV+EY ++ +K +R+P + Y +I A+ +H
Sbjct: 127 HFAF-----QDENYLYLVMEYY--VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGE-PNISYICSRYYRAPELIFG 247
R +G HRDIKP N+L++ H ++L DFGS K+ G ++ + + Y +PE++
Sbjct: 180 R-LGYVHRDIKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 248 ATEYTTAI------DIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
D W+ G E+ G+ F DS + +I+
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV-------------- 283
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC---TALDALIHPFF- 357
K H + + +P EA D + RLL P R A D HPFF
Sbjct: 284 ----------HYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGRGGAGDFRTHPFFF 332
Query: 358 ----DELRD 362
D LRD
Sbjct: 333 GLDWDGLRD 341
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 65 GQPKQTISYMAER-----IVGQGSFGVVFQAKCLETGETVAIKKVLQDK--------RYK 111
G T S++++R I+G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 112 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
RE Q L+HP +V++ + T L +V+EYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
I V A Q AL++ H++ G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 173
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ I + Y +PE G + + D++S GCV+ E++ G+P F GDS V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 25/231 (10%)
Query: 65 GQPKQTISYMAER-----IVGQGSFGVVFQAKCLETGETVAIKKVLQDK--------RYK 111
G T S++++R I+G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 112 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
RE Q L+HP +V++ + T L +V+EYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
I V A Q AL++ H++ G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 173
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
+ I + Y +PE G + D++S GCV+ E++ G+P F GDS
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 123
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ ++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 124 PNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
PN+V L + E L LV EY E +V H R + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVXEYASGGEVFDYLVAH-----GRXKEKEARAKFRQI 122
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y H+ + HRD+K +NLL++ + +K+ DFG + G ++ + Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADXN-IKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
PEL G +D+WS G ++ L+ G F G +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 65 GQPKQTISYMAER-----IVGQGSFGVVFQAKCLETGETVAIKKVLQDK--------RYK 111
G T S++++R I+G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 112 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
RE Q L+HP +V++ + T L +V+EYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
I V A Q AL++ H++ G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 173
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ I + Y +PE G + + D++S GCV+ E++ G+P F GDS V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 40/305 (13%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 127
Y + ++G G+ VV A C E VAIK++ +K + +E+Q M HPN+V
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY----VKLYAYQIFR 183
S F KDEL+L + L +V ++KH + + + ++
Sbjct: 77 SYYTSFVV---KDELWLVMKL-LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG------EPNISYICSR 237
L Y+H++ G HRD+K N+L+ V++ DFG + L G + +++ +
Sbjct: 133 GLEYLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
+ APE++ Y DIWS G EL G P V ++ + P
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDP---- 244
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
P ++ K K+ ++S LQ P R TA + L H FF
Sbjct: 245 -------------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291
Query: 358 DELRD 362
+ ++
Sbjct: 292 QKAKN 296
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 77 RIVGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVS 128
R +G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
K +S ++ L L++E++P R ++ K +R+ I + Y QI + + Y+
Sbjct: 79 YKGVCYSAGRRN---LKLIMEFLPYGSLR--EYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRA 241
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ A
Sbjct: 134 G-TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYA 188
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
PE + ++++ A D+WS G V+ EL
Sbjct: 189 PESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 109 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 164 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 218
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 219 SL-TESKFSVASDVWSFGVVLYELF 242
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 65 GQPKQTISYMAER-----IVGQGSFGVVFQAKCLETGETVAIKKVLQDK--------RYK 111
G T S++++R I+G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 112 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
RE Q L+HP +V++ + T L +V+EYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
I V A Q AL++ H++ G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 173
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ I + Y +PE G + + D++S GCV+ E++ G+P F GDS V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 85 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 140 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 194
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 195 SL-TESKFSVASDVWSFGVVLYELF 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 65 GQPKQTISYMAER-----IVGQGSFGVVFQAKCLETGETVAIKKVLQDK--------RYK 111
G T S++++R I+G G V A+ L VA+K + D R++
Sbjct: 18 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 77
Query: 112 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
RE Q L+HP +V++ + T L +V+EYV R + H
Sbjct: 78 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 135
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
I V A Q AL++ H++ G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 136 IEVIADACQ---ALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 190
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ I + Y +PE G + + D++S GCV+ E++ G+P F GDS V
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 133 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 130/286 (45%), Gaps = 51/286 (17%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLD-HPNVVSL 129
+ ++ +G+GSF + KC+ A + KR + +E+ ++L + HPN+V L
Sbjct: 14 LKDKPLGEGSFSIC--RKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKL 71
Query: 130 KHCFFSTTDKDELYLNLVLEYVP--ETVHRVVK--HFNKLNQRMPMIYVKLYAYQIFRAL 185
F D+L+ LV+E + E R+ K HF++ M ++ A+
Sbjct: 72 HEVF-----HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIM-------RKLVSAV 119
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYIC-SRYYRAP 242
S++H +GV HRD+KP+NLL ++K+ DFG A++ + C + +Y AP
Sbjct: 120 SHMH-DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGK-PLFPGDSGV--DQLVEIIKVLGTPTREEIK 299
EL+ Y + D+WS G ++ ++ G+ P D + VEI+K +
Sbjct: 179 ELL-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK------- 230
Query: 300 CMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR 345
+F F + W K + EA DL+ LL PN R
Sbjct: 231 ------GDFSF---EGEAW-----KNVSQEAKDLIQGLLTVDPNKR 262
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 136 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 190
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 191 SL-TESKFSVASDVWSFGVVLYELF 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 76 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 131 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 185
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 186 SL-TESKFSVASDVWSFGVVLYELF 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 84 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLG- 137
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 138 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 193
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 194 SL-TESKFSVASDVWSFGVVLYELF 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 82 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 137 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 191
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 192 SL-TESKFSVASDVWSFGVVLYELF 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 83 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 138 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 192
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 193 SL-TESKFSVASDVWSFGVVLYELF 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 151 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 205
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 206 SL-TESKFSVASDVWSFGVVLYELF 229
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 77 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 132 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 186
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 187 SL-TESKFSVASDVWSFGVVLYELF 210
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 50/308 (16%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN----RELQTM-RLLDHPNVVS 128
+ ++G+G++ V A L+ G+ A+K + + + RE++T+ + + N++
Sbjct: 16 LTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNK---LNQRMPMIYVKLYAYQIFRAL 185
L F +D+ LV E + ++ H K N+R V+ + AL
Sbjct: 76 LIEFF-----EDDTRFYLVFEKLQGG--SILAHIQKQKHFNEREASRVVR----DVAAAL 124
Query: 186 SYIHRSIGVCHRDIKPQNLLVNP--HTHQVKLCDF--GSAKVLVKG-----EPNISYIC- 235
++H + G+ HRD+KP+N+L VK+CDF GS L P ++ C
Sbjct: 125 DFLH-TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 236 SRYYRAPELIF----GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVD---QLVEIIK 288
S Y APE++ AT Y D+WS G V+ ++ G P F G G D E+ +
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCR 243
Query: 289 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTA 348
V E I+ +++FP W I EA DL+S+LL R +A
Sbjct: 244 VCQNKLFESIQ-----EGKYEFPD---KDWAHI-----SSEAKDLISKLLVRDAKQRLSA 290
Query: 349 LDALIHPF 356
L HP+
Sbjct: 291 AQVLQHPW 298
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 151 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 205
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 206 SL-TESKFSVASDVWSFGVVLYELF 229
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 133 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 40/304 (13%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 127
Y + ++G G+ VV A C E VAIK++ +K + +E+Q M HPN+V
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY----VKLYAYQIFR 183
S F KDEL+L + L +V ++KH + + + ++
Sbjct: 72 SYYTSFVV---KDELWLVMKL-LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG------EPNISYICSR 237
L Y+H++ G HRD+K N+L+ V++ DFG + L G + +++ +
Sbjct: 128 GLEYLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
+ APE++ Y DIWS G EL G P V ++ + P
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDP---- 239
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
P ++ K K+ ++S LQ P R TA + L H FF
Sbjct: 240 -------------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 286
Query: 358 DELR 361
+ +
Sbjct: 287 QKAK 290
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 133 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI---FWYAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNVVSLKH 131
Y+ + +G GS+ + T A+K + + KR + E++ + R HPN+++LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ D +YL L E + ++++ K +V + I + + Y+H S
Sbjct: 89 VY---DDGKHVYLVTELMRGGELLDKILRQ--KFFSEREASFV---LHTIGKTVEYLH-S 139
Query: 192 IGVCHRDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 245
GV HRD+KP N+L NP +++CDFG AK L + C + + APE +
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLMTPCYTANFVAPE-V 196
Query: 246 FGATEYTTAIDIWSAGCVVAELMLG-KPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
Y DIWS G ++ ++ G P G S D EI+ +G+
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG----------- 243
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
KF + W+ + A DLVS++L P+ R TA L HP+ +
Sbjct: 244 ----KF-TLSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 44/249 (17%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 130
++GQG+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 131 HCFFS--------TTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+ T K + L + +EY + H LNQ+ Y +L+ QI
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE-YWRLFR-QIL 126
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEPNI---- 231
ALSYIH S G+ HRD+KP N+ ++ + VK+ DFG AK +L N+
Sbjct: 127 EALSYIH-SQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
S I + Y A E++ G Y ID++S G + E+ ++P +G+++ V I+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNIL 238
Query: 288 KVLGTPTRE 296
K L + + E
Sbjct: 239 KKLRSVSIE 247
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 43/292 (14%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNVVSLKH 131
Y+ + +G GS+ + T A+K + + KR + E++ + R HPN+++LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ D +YL L E + ++++ K +V + I + + Y+H S
Sbjct: 89 VY---DDGKHVYLVTELMRGGELLDKILRQ--KFFSEREASFV---LHTIGKTVEYLH-S 139
Query: 192 IGVCHRDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 245
GV HRD+KP N+L NP +++CDFG AK L + C + + APE +
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLMTPCYTANFVAPE-V 196
Query: 246 FGATEYTTAIDIWSAGCVVAELMLG-KPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
Y DIWS G ++ ++ G P G S D EI+ +G+
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG----------- 243
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
KF + W+ + A DLVS++L P+ R TA L HP+
Sbjct: 244 ----KFT-LSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 52/305 (17%)
Query: 70 TISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNVVS 128
T Y + +G GS+ V + T A+K + + KR E++ + R HPN+++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 129 LKHCFFSTTDKDELYLNLVLEYVP--ETVHRVV--KHFNKLNQRMPMIYVKLYAYQIFRA 184
LK + D Y+ +V E + E + +++ K F++ + + I +
Sbjct: 81 LKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL-------FTITKT 128
Query: 185 LSYIHRSIGVCHRDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRY 238
+ Y+H GV HRD+KP N+L NP + +++CDFG AK L + C +
Sbjct: 129 VEYLHAQ-GVVHRDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGLLMTPCYTAN 185
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
+ APE + Y A DIWS G ++ ++ G F + D EI+ +G+
Sbjct: 186 FVAPE-VLERQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILARIGSG----- 238
Query: 299 KCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-- 356
KF + W+ + A DLVS++L P+ R TA L HP+
Sbjct: 239 ----------KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282
Query: 357 -FDEL 360
+D+L
Sbjct: 283 HWDQL 287
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 137/304 (45%), Gaps = 60/304 (19%)
Query: 70 TISYMAERIVGQGSFGVV-----------FQAKCLETGETVAIKKVLQDKRYKNRELQTM 118
T Y +G+G+F VV + AK + T + A +D + RE +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-----RDHQKLEREARIC 84
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVL--EYVPETVHRVVKHFNKLNQRMPMIYVKL 176
RLL HPN+V L H S L +LV E + V R +++++ + +
Sbjct: 85 RLLKHPNIVRL-HDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCI----- 136
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--IS 232
+QI ++++IH+ + HRD+KP+NLL+ VKL DFG A + V+GE
Sbjct: 137 --HQILESVNHIHQH-DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFG 192
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
+ + Y +PE + Y +DIW+ G ++ L++G P F D +L + IK
Sbjct: 193 FAGTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPF-WDEDQHKLYQQIKA--- 247
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
+ FP + W + PEA +L++++L +P R TA AL
Sbjct: 248 -------------GAYDFP---SPEWDTV-----TPEAKNLINQMLTINPAKRITADQAL 286
Query: 353 IHPF 356
HP+
Sbjct: 287 KHPW 290
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 44/249 (17%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 130
++GQG+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 131 HCFFS--------TTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+ T K + L + +EY + H LNQ+ Y +L+ QI
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE-YWRLFR-QIL 126
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEPNI---- 231
ALSYIH S G+ HRD+KP N+ ++ + VK+ DFG AK +L N+
Sbjct: 127 EALSYIH-SQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
S I + Y A E++ G Y ID++S G + E+ ++P +G+++ V I+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNIL 238
Query: 288 KVLGTPTRE 296
K L + + E
Sbjct: 239 KKLRSVSIE 247
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSLKHCFFS 135
+G G+FGV + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 136 TTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T +L +V+EY E R+ R + + Q+ +SY H ++
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCH-AMQ 135
Query: 194 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
VCHRD+K +N L++ ++K+C FG +K V S + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 253 TAIDIWSAGCVVAELMLG 270
D+WS G + +++G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 22/250 (8%)
Query: 65 GQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 120
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAY 179
+PN+V+ + DEL++ V+EY+ ++ VV M +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTE-----TCMDEGQIAAVCR 123
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 238
+ +AL ++H S V HRDIK N+L+ VKL DFG A++ + + + + Y
Sbjct: 124 ECLQALEFLH-SNQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPY 181
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
+ APE++ Y +DIWS G + E++ G+P + ++ + L +I GTP +
Sbjct: 182 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 239
Query: 299 KCMNPNYTEF 308
+ ++ + +F
Sbjct: 240 EKLSAIFRDF 249
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 24/226 (10%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNV 126
Y+ + +G+GSFG K E G IK++ +++ RE+ + + HPN+
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY----VKLYAYQIF 182
V + F + LY+ V++Y F ++N + +++ + + QI
Sbjct: 86 VQYRESF---EENGSLYI--VMDYCEGG-----DLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRA 241
AL ++H + HRDIK QN+ + V+L DFG A+VL E + I + YY +
Sbjct: 136 LALKHVHDR-KILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
PE I Y DIW+ GCV+ EL K F S + +++II
Sbjct: 194 PE-ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 68
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 245
H IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 121 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ +D+WS G V+ ++ G+ P D D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNA 365
+++K + +PW KI + L+ ++L +P+ R T D ++++ A
Sbjct: 218 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 272
Query: 366 RLP 368
+ P
Sbjct: 273 KRP 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 22/250 (8%)
Query: 65 GQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 120
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAY 179
+PN+V+ + DEL++ V+EY+ ++ VV M +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTE-----TCMDEGQIAAVCR 123
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 238
+ +AL ++H S V HRDIK N+L+ VKL DFG A++ + + + Y
Sbjct: 124 ECLQALEFLH-SNQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSEMVGTPY 181
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
+ APE++ Y +DIWS G + E++ G+P + ++ + L +I GTP +
Sbjct: 182 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 239
Query: 299 KCMNPNYTEF 308
+ ++ + +F
Sbjct: 240 EKLSAIFRDF 249
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 143/365 (39%), Gaps = 88/365 (24%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL--------DHP 124
Y R +G G F V+ ++ VA+K V + Y L ++LL P
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDP 92
Query: 125 N---VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLN-QRMPMIYVKLYAYQ 180
N VV L F + + +++ +V E + H ++K K N Q +P+ VK Q
Sbjct: 93 NKDMVVQLID-DFKISGMNGIHVCMVFEVLG---HHLLKWIIKSNYQGLPVRCVKSIIRQ 148
Query: 181 IFRALSYIHRSIGVCHRDIKPQN------------------------------------- 203
+ + L Y+H + H DIKP+N
Sbjct: 149 VLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAP 208
Query: 204 ---LLVNP------HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTA 254
LLVNP +VK+ D G+A + K I +R YR+ E++ GA Y+T
Sbjct: 209 AADLLVNPLDPRNADKIRVKIADLGNACWVHKH--FTEDIQTRQYRSIEVLIGAG-YSTP 265
Query: 255 IDIWSAGCVVAELMLGKPLFPGDSG------VDQLVEIIKVLGTPTREEIKCMNPNYTEF 308
DIWS C+ EL G LF SG D + II++LG+ R ++ Y+
Sbjct: 266 ADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRH--FALSGKYSRE 323
Query: 309 KFPQ-------IKAHPWHKI--------FPKRMPPEAVDLVSRLLQYSPNLRCTALDALI 353
F + K PW +P + D + +L+ P R +A + L
Sbjct: 324 FFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLR 383
Query: 354 HPFFD 358
HP+ +
Sbjct: 384 HPWLN 388
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + K +R+ I + Y QI + + Y+
Sbjct: 79 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HR++ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 134 KRYI-HRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI---FWYAPE 188
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 189 SL-TESKFSVASDVWSFGVVLYELF 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 22/250 (8%)
Query: 65 GQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 120
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAY 179
+PN+V+ + DEL++ V+EY+ ++ VV M +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTE-----TCMDEGQIAAVCR 123
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 238
+ +AL ++H S V HRDIK N+L+ VKL DFG A++ + + + Y
Sbjct: 124 ECLQALEFLH-SNQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVGTPY 181
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
+ APE++ Y +DIWS G + E++ G+P + ++ + L +I GTP +
Sbjct: 182 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 239
Query: 299 KCMNPNYTEF 308
+ ++ + +F
Sbjct: 240 EKLSAIFRDF 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 22/250 (8%)
Query: 65 GQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 120
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAY 179
+PN+V+ + DEL++ V+EY+ ++ VV M +
Sbjct: 75 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTE-----TCMDEGQIAAVCR 124
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 238
+ +AL ++H S V HRDIK N+L+ VKL DFG A++ + + + Y
Sbjct: 125 ECLQALEFLH-SNQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVGTPY 182
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
+ APE++ Y +DIWS G + E++ G+P + ++ + L +I GTP +
Sbjct: 183 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 240
Query: 299 KCMNPNYTEF 308
+ ++ + +F
Sbjct: 241 EKLSAIFRDF 250
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 46/302 (15%)
Query: 70 TISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNVVS 128
T Y + +G GS+ V + T A+K + + KR E++ + R HPN+++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKH-FNKLNQRMPMIYVKLYAYQIFRALSY 187
LK + D +Y+ L E + ++++ F + +++ I + + Y
Sbjct: 81 LKDVY---DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT------ITKTVEY 131
Query: 188 IHRSIGVCHRDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRA 241
+H + GV HRD+KP N+L NP + +++CDFG AK L + C + + A
Sbjct: 132 LH-AQGVVHRDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGLLXTPCYTANFVA 188
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE + Y A DIWS G ++ + G F + D EI+ +G+
Sbjct: 189 PE-VLERQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILARIGSG-------- 238
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF---FD 358
KF + W+ + A DLVS+ L P+ R TA L HP+ +D
Sbjct: 239 -------KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWD 285
Query: 359 EL 360
+L
Sbjct: 286 QL 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 32/223 (14%)
Query: 76 ERIVGQGSFGVVFQAKCLETGETVAIKKVLQD------KRYKN--RELQTMRLLDHPNVV 127
E I+G G FG V++A G+ VA+K D + +N +E + +L HPN++
Sbjct: 12 EEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPET-VHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L+ E L LV+E+ ++RV+ +R+P + +A QI R ++
Sbjct: 70 ALRGVCLK-----EPNLCLVMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMN 119
Query: 187 YIHRS--IGVCHRDIKPQNLLV-------NPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Y+H + + HRD+K N+L+ + +K+ DFG A+ + +S +
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMSAAGAY 178
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ APE+I A+ ++ D+WS G ++ EL+ G+ F G G+
Sbjct: 179 AWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSLKHCFFS 135
+G G+FGV + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 136 TTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T +L +V+EY E R+ R + + Q+ +SY H ++
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCH-AMQ 135
Query: 194 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
VCHRD+K +N L++ ++K+C FG +K V + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDG 195
Query: 253 TAIDIWSAGCVVAELMLG 270
D+WS G + +++G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 245
H IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 121 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ +D+WS G V+ ++ G+ P D D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNA 365
+++K + +PW KI + L+ ++L +P+ R T D ++++ A
Sbjct: 218 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 272
Query: 366 RLP 368
+ P
Sbjct: 273 KRP 275
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 161/415 (38%), Gaps = 101/415 (24%)
Query: 26 PEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGR-NGQPKQTISYMAERIVGQGSF 84
PE+ ++ DD E E D N G + IG NG+ Y R +G G F
Sbjct: 1 PEQEEEILGSDDDEQE----DPNDYCKGGYHLVKIGDLFNGR------YHVIRKLGWGHF 50
Query: 85 GVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL--------DHPN---VVSLKHCF 133
V+ + ++ + VA+K V + Y L +RLL + PN VV L F
Sbjct: 51 STVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLN-QRMPMIYVKLYAYQIFRALSYIHRSI 192
+ + ++ +V E + H ++K K N Q +P+ VK Q+ + L Y+H
Sbjct: 111 -KISGVNGTHICMVFEVLG---HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC 166
Query: 193 GVCHRDIKPQNLLV---------------------------------------------- 206
+ H DIKP+N+L+
Sbjct: 167 RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLE 226
Query: 207 --NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVV 264
N +VK+ D G+A + K I +R YR+ E++ G+ Y T DIWS C+
Sbjct: 227 PKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMA 283
Query: 265 AELMLGKPLFPGDSG------VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ------ 312
EL G LF SG D + II++LG R+ I + Y++ F +
Sbjct: 284 FELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI--VAGKYSKEFFTKKGDLKH 341
Query: 313 -IKAHPWHKI--------FPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFD 358
K PW + + D + +L+ P R TA + L HP+ +
Sbjct: 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 121
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 245
H IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ +D+WS G V+ ++ G+ P D D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNA 365
+++K + +PW KI + L+ ++L +P+ R T D ++++ A
Sbjct: 219 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 273
Query: 366 RLP 368
+ P
Sbjct: 274 KRP 276
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+S ++ L L++EY+P R + +R+ I + Y QI + + Y+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 243
+ HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 136 KRYI-HRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 190
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++++ A D+WS G V+ EL
Sbjct: 191 SL-TESKFSVASDVWSFGVVLYELF 214
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 48/302 (15%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 246
IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ +D+WS G V+ ++ G+ P D D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNAR 366
++K + +PW KI + L+ ++L +P+ R T D ++++ A+
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 367 LP 368
P
Sbjct: 275 RP 276
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 48/302 (15%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 246
IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ +D+WS G V+ ++ G+ P D D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNAR 366
++K + +PW KI + L+ ++L +P+ R T D ++++ A+
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 367 LP 368
P
Sbjct: 275 RP 276
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 48/302 (15%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 246
IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ +D+WS G V+ ++ G+ P D D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNAR 366
++K + +PW KI + L+ ++L +P+ R T D ++++ A+
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 367 LP 368
P
Sbjct: 275 RP 276
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 245
H IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 121 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ +D+WS G V+ ++ G+ P D D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNA 365
+++K + +PW KI + L+ ++L +P+ R T D ++++ A
Sbjct: 218 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 272
Query: 366 RLP 368
+ P
Sbjct: 273 KRP 275
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 130/308 (42%), Gaps = 55/308 (17%)
Query: 64 NGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTM----- 118
N K + +Y + +G+G+F VV + TG A K ++ K+ R+ Q +
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREAR 80
Query: 119 --RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVV-KHFNKLNQRMPMIY 173
R L HPN+V L ++E + LV + V E +V + F I
Sbjct: 81 ICRKLQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 135
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNI 231
QI +++Y H S G+ HR++KP+NLL+ VKL DFG A + E
Sbjct: 136 ------QILESIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 188
Query: 232 SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLG 291
+ + Y +PE + Y+ +DIW+ G ++ L++G P F D +L
Sbjct: 189 GFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRL-------- 238
Query: 292 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK--RMPPEAVDLVSRLLQYSPNLRCTAL 349
+ QIKA + P+ + PEA L+ +L +P R TA
Sbjct: 239 ------------------YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITAD 280
Query: 350 DALIHPFF 357
AL P+
Sbjct: 281 QALKVPWI 288
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 148/339 (43%), Gaps = 66/339 (19%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE------LQTMRLLDHPN 125
+++ R +G G+FG V + ++ + A+K V K+Y L+ ++ D N
Sbjct: 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINN 95
Query: 126 VVSLK-HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+K H F D ++ L+ E + +++ ++ N + I KLY +I +A
Sbjct: 96 NNIVKYHGKFMYYD----HMCLIFEPLGPSLYEIITRNNYNGFHIEDI--KLYCIEILKA 149
Query: 185 LSYIHRSIGVCHRDIKPQNLLVN-PHTHQ-----------------------VKLCDFGS 220
L+Y+ R + + H D+KP+N+L++ P+ + +KL DFG
Sbjct: 150 LNYL-RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC 208
Query: 221 AKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
A K + + S I +R YRAPE+I + + D+WS GCV+AEL G LF +
Sbjct: 209 ATF--KSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHM 265
Query: 281 DQLVEIIKVL----------GTPTREEIKCMNPNYTEFKFPQ-----------IKAHPWH 319
+ L + ++ T T K +N + + +P+ K P +
Sbjct: 266 EHLAMMESIIQPIPKNMLYEATKTNGS-KYVNKDELKLAWPENASSINSIKHVKKCLPLY 324
Query: 320 KIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFD 358
KI + D + +LQ P LR + + L H F +
Sbjct: 325 KIIKHEL---FCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 61/308 (19%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 128
++G+G+F VV + ETG+ A+K V K + RE +L HP++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 129 LKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKL----YAYQIF 182
L + S L +V E++ + +VK + +Y + Y QI
Sbjct: 91 LLETYSSDG-----MLYMVFEFMDGADLCFEIVKRADA-----GFVYSEAVASHYMRQIL 140
Query: 183 RALSYIHRSIGVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---SYICSR 237
AL Y H + + HRD+KP+N+L+ ++ VKL DFG A L GE + + +
Sbjct: 141 EALRYCHDN-NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGTP 197
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
++ APE++ Y +D+W G ++ L+ G F G ++L E I + +
Sbjct: 198 HFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGK 248
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
K MNP W I A DLV R+L P R T +AL HP+
Sbjct: 249 YK-MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Query: 358 DELRDPNA 365
E RD A
Sbjct: 291 KE-RDRYA 297
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 121
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 245
H IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ +D+WS G V+ ++ G+ P D D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNA 365
+++K + +PW KI + L+ ++L +P+ R T D ++++ A
Sbjct: 219 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 273
Query: 366 RLP 368
+ P
Sbjct: 274 KRP 276
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 67
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 68 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 119
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 245
H IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 120 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ +D+WS G V+ ++ G+ P D D E Y
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 216
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNA 365
+++K + +PW KI + L+ ++L +P+ R T D ++++ A
Sbjct: 217 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 271
Query: 366 RLP 368
+ P
Sbjct: 272 KRP 274
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVS 128
Y+ + +G+G F V + L G A+K++L QD+ RE RL +HPN++
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 129 L-KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L +C K E +L L + T+ ++ + + I R L
Sbjct: 91 LVAYCLRERGAKHEAWLLLPF-FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGS---AKVLVKGEPNISYI-------CSR 237
IH + G HRD+KP N+L+ V L D GS A + V+G + C+
Sbjct: 150 IH-AKGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 238 YYRAPELIFGATEYTTA---IDIWSAGCVVAELMLGK 271
YRAPEL F + D+WS GCV+ +M G+
Sbjct: 208 SYRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 50/285 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 245
H IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 121 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ +D+WS G V+ ++ G+ P D D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALD 350
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 218 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPD 257
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 246
IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ +D+WS G V+ ++ G+ P D D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALD 350
++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPD 257
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 246
IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ +D+WS G V+ ++ G+ P D D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALD 350
++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPD 257
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 246
IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ +D+WS G V+ ++ G+ P D D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALD 350
++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPD 258
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS-- 135
++G G FG VF+AK G+T I++V + RE++ + LDH N+V C+
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 78
Query: 136 ---TTDKDELYLNLVLEYVPETVHRVVKHFNK-----------------LNQRMPMIYVK 175
T D L + +Y PE + K + +R K
Sbjct: 79 YDPETSDDSLESS---DYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 176 LYAYQIF----RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ A ++F + + YIH S + HRD+KP N+ + T QVK+ DFG L
Sbjct: 136 VLALELFEQITKGVDYIH-SKKLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRT 193
Query: 232 SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
+ Y +PE I + +Y +D+++ G ++AEL+
Sbjct: 194 RSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 22/250 (8%)
Query: 65 GQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 120
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAY 179
+PN+V+ + DEL++ V+EY+ ++ VV M +
Sbjct: 75 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTE-----TCMDEGQIAAVCR 124
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 238
+ +AL ++H S V HR+IK N+L+ VKL DFG A++ + + + + Y
Sbjct: 125 ECLQALEFLH-SNQVIHRNIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPY 182
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
+ APE++ Y +DIWS G + E++ G+P + ++ + L +I GTP +
Sbjct: 183 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 240
Query: 299 KCMNPNYTEF 308
+ ++ + +F
Sbjct: 241 EKLSAIFRDF 250
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 246
IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ +D+WS G V+ ++ G+ P D D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALD 350
++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPD 257
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSLKHCFFS 135
+G G+FGV + + E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 136 TTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T +L +V+EY E R+ R + + Q+ +SY H ++
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYAH-AMQ 135
Query: 194 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
V HRD+K +N L++ ++K+ DFG +K V S + + Y APE++
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDG 195
Query: 253 TAIDIWSAGCVVAELMLG 270
D+WS G + +++G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 135/311 (43%), Gaps = 62/311 (19%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMR---------- 119
+Y + I+G+G VV + T + A+K V + E+Q +R
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 120 --LLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
+ HPN++ LK + + T + LV + + + + F+ L +++ + +
Sbjct: 78 RKVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKG-----ELFDYLTEKVTL--SEKE 125
Query: 178 AYQIFRAL----SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+I RAL +H+ + + HRD+KP+N+L++ + +KL DFG + L GE S
Sbjct: 126 TRKIMRALLEVICALHK-LNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRSV 183
Query: 234 ICSRYYRAPELIFGATE-----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
+ Y APE+I + Y +D+WS G ++ L+ G P F + L I
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI-- 241
Query: 289 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTA 348
M+ NY +F P+ + DLVSR L P R TA
Sbjct: 242 ------------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQKRYTA 278
Query: 349 LDALIHPFFDE 359
+AL HPFF +
Sbjct: 279 EEALAHPFFQQ 289
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 48/323 (14%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTM 118
QP ++ R++G+G FG V + TG+ A KK+ + + K E Q +
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
++ VVSL + + + KD L L L L + + H + P YA
Sbjct: 239 EKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKFHIY-HMGQAG--FPEARAVFYA 292
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
+I L +HR + +RD+KP+N+L++ H H +++ D G A + +G+ + +
Sbjct: 293 AEICCGLEDLHRE-RIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
Y APE++ YT + D W+ GC++ E++ G+ F Q + IK REE+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEV 397
Query: 299 KCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC-----TALDALI 353
+ + +K P + + +R P+A L S+LL P R +A +
Sbjct: 398 ERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 354 HPFFDELRDPNARLPSGRFLPPL 376
HP F +L RL +G PP
Sbjct: 445 HPLFKKLN--FKRLGAGMLEPPF 465
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS-- 135
++G G FG VF+AK G+T IK+V + RE++ + LDH N+V C+
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 77
Query: 136 ----TTDKDELY-----LNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
T+ K+ L + +E+ + T+ + ++ + +++ + QI + +
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALELFEQITKGV 135
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
YIH S + +RD+KP N+ + T QVK+ DFG L + Y +PE I
Sbjct: 136 DYIH-SKKLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQI 193
Query: 246 FGATEYTTAIDIWSAGCVVAELM 268
+ +Y +D+++ G ++AEL+
Sbjct: 194 -SSQDYGKEVDLYALGLILAELL 215
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 48/323 (14%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTM 118
QP ++ R++G+G FG V + TG+ A KK+ + + K E Q +
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
++ VVSL + + + KD L L L L + + H + P YA
Sbjct: 239 EKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKFHIY-HMGQAG--FPEARAVFYA 292
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
+I L +HR + +RD+KP+N+L++ H H +++ D G A + +G+ + +
Sbjct: 293 AEICCGLEDLHRE-RIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEI 298
Y APE++ YT + D W+ GC++ E++ G+ F Q + IK REE+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEV 397
Query: 299 KCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRC-----TALDALI 353
+ + +K P + + +R P+A L S+LL P R +A +
Sbjct: 398 ERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 354 HPFFDELRDPNARLPSGRFLPPL 376
HP F +L RL +G PP
Sbjct: 445 HPLFKKLN--FKRLGAGMLEPPF 465
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 54/305 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 69
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 121
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 243
H IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APE
Sbjct: 122 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 177
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
L+ + +D+WS G V+ ++ G+ P D D E
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 217
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
Y+++K + +PW KI + L+ ++L +P+ R T D ++++
Sbjct: 218 -YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKK 271
Query: 364 NARLP 368
A+ P
Sbjct: 272 GAKRP 276
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 48/284 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ +L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK--- 69
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 246
IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+ +D+WS G V+ ++ G+ P D D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALD 350
++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPD 258
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 50/303 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G+ G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 245
H IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 121 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
+ +D+WS G V+ ++ G+ P D D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNA 365
+++K + +PW KI + L+ ++L +P+ R T D ++++ A
Sbjct: 218 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 272
Query: 366 RLP 368
+ P
Sbjct: 273 KRP 275
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 54/305 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 68
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 243
H IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APE
Sbjct: 121 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
L+ + +D+WS G V+ ++ G+ P D D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 216
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
Y+++K + +PW KI + L+ ++L +P+ R T D ++++
Sbjct: 217 -YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKK 270
Query: 364 NARLP 368
A+ P
Sbjct: 271 GAKRP 275
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 48/304 (15%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR-----ELQT 117
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E+
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
+ DHPN+V L F+ + L +++E+ V +L + + +++
Sbjct: 88 LASCDHPNIVKLLDAFYYENN-----LWILIEFCAGGAVDAV--MLELERPLTESQIQVV 140
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICS 236
Q AL+Y+H + + HRD+K N+L +KL DFG SAK + S+I +
Sbjct: 141 CKQTLDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGT 198
Query: 237 RYYRAPELIFGATE----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y+ APE++ T Y D+WS G + E+ +P
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP-------------------- 238
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
P E +NP K K+ P P R D + + L+ + + R T L
Sbjct: 239 PHHE----LNPMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
Query: 353 IHPF 356
HPF
Sbjct: 293 QHPF 296
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 48/304 (15%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR-----ELQT 117
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E+
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
+ DHPN+V L F+ + L +++E+ V +L + + +++
Sbjct: 88 LASCDHPNIVKLLDAFYYENN-----LWILIEFCAGGAVDAV--MLELERPLTESQIQVV 140
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICS 236
Q AL+Y+H + + HRD+K N+L +KL DFG SAK + S+I +
Sbjct: 141 CKQTLDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGT 198
Query: 237 RYYRAPELIFGATE----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y+ APE++ T Y D+WS G + E+ +P
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP-------------------- 238
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
P E +NP K K+ P P R D + + L+ + + R T L
Sbjct: 239 PHHE----LNPMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
Query: 353 IHPF 356
HPF
Sbjct: 293 QHPF 296
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYK-NRELQTMRLLDHPNVVSLKHCFF 134
+VG G++G V++ + ++TG+ AIK V D+ + +E+ ++ H ++ + F
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 135 STTD----KDELYLNLVLEYV-PETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+ D+L+ LV+E+ +V ++K N + ++ +I R LS++H
Sbjct: 91 IKKNPPGMDDQLW--LVMEFCGAGSVTDLIK--NTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK--GEPNISYICSRYYRAPELIF- 246
+ V HRDIK QN+L+ + +VKL DFG + L + G N ++I + Y+ APE+I
Sbjct: 147 QH-KVIHRDIKGQNVLLTENA-EVKLVDFGVSAQLDRTVGRRN-TFIGTPYWMAPEVIAC 203
Query: 247 ----GATEYTTAIDIWSAGCVVAELMLGKP 272
AT Y D+WS G E+ G P
Sbjct: 204 DENPDAT-YDFKSDLWSLGITAIEMAEGAP 232
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 143/367 (38%), Gaps = 90/367 (24%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL--------DHP 124
Y R +G G F V+ + ++ + VA+K V + Y L +RLL + P
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 82
Query: 125 N---VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLN-QRMPMIYVKLYAYQ 180
N VV L F + + ++ +V E + H ++K K N Q +P+ VK Q
Sbjct: 83 NREMVVQLLDDF-KISGVNGTHICMVFEVLG---HHLLKWIIKSNYQGLPLPCVKKIIQQ 138
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLV---------------------------------- 206
+ + L Y+H + H DIKP+N+L+
Sbjct: 139 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 198
Query: 207 --------------NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
N +VK+ D G+A + K I +R YR+ E++ G+ Y
Sbjct: 199 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-YN 255
Query: 253 TAIDIWSAGCVVAELMLGKPLFPGDSG------VDQLVEIIKVLGTPTREEIKCMNPNYT 306
T DIWS C+ EL G LF SG D + II++LG R+ I + Y+
Sbjct: 256 TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI--VAGKYS 313
Query: 307 EFKFPQ-------IKAHPWHKI--------FPKRMPPEAVDLVSRLLQYSPNLRCTALDA 351
+ F + K PW + + D + +L+ P R TA +
Sbjct: 314 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC 373
Query: 352 LIHPFFD 358
L HP+ +
Sbjct: 374 LRHPWLN 380
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 129/303 (42%), Gaps = 55/303 (18%)
Query: 68 KQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 120
K + +Y + +G+G+F VV + TG A K++ K+ R+ Q + R
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 61
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVV-KHFNKLNQRMPMIYVKLY 177
L HPN+V L ++E + LV + V E +V + F I
Sbjct: 62 LQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 112
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYIC 235
QI +++Y H S G+ HR++KP+NLL+ VKL DFG A + E +
Sbjct: 113 --QILESIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 169
Query: 236 SRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTR 295
+ Y +PE + Y+ +DIW+ G ++ L++G P F D +L
Sbjct: 170 TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRL------------ 215
Query: 296 EEIKCMNPNYTEFKFPQIKAHPWHKIFPK--RMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+ QIKA + P+ + PEA L+ +L +P R TA AL
Sbjct: 216 --------------YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261
Query: 354 HPF 356
P+
Sbjct: 262 VPW 264
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 54/305 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 243
H IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APE
Sbjct: 121 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
L+ + +D+WS G V+ ++ G+ P D D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE------------------ 216
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
Y+++K + +PW KI + L+ ++L +P+ R T D ++++
Sbjct: 217 -YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKK 270
Query: 364 NARLP 368
A+ P
Sbjct: 271 GAKRP 275
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 62/311 (19%)
Query: 72 SYMAERIVGQGSFGVV-----------FQAKCLET--GETVAIKKVLQDKRYKNRELQTM 118
+Y + I+G+G VV + K ++ G + + ++V + + +E+ +
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 119 RLLD-HPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
R + HPN++ LK + + T + LV + + + + F+ L +++ + +
Sbjct: 65 RKVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKG-----ELFDYLTEKVTL--SEKE 112
Query: 178 AYQIFRAL----SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+I RAL +H+ + + HRD+KP+N+L++ + +KL DFG + L GE
Sbjct: 113 TRKIMRALLEVICALHK-LNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREV 170
Query: 234 ICSRYYRAPELIFGATE-----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
+ Y APE+I + Y +D+WS G ++ L+ G P F + L I
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI-- 228
Query: 289 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTA 348
M+ NY +F P+ + DLVSR L P R TA
Sbjct: 229 ------------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQKRYTA 265
Query: 349 LDALIHPFFDE 359
+AL HPFF +
Sbjct: 266 EEALAHPFFQQ 276
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 51/304 (16%)
Query: 71 ISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDK-RYKNRELQTMRLLD-HPNVVS 128
IS+ + ++G G+ G + + + VA+K++L + + +RE+Q +R D HPNV+
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVIR 82
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVV--KHFNKLNQRMPMIYVKLYAYQIFRALS 186
+ T+KD + + +E T+ V K F L P+ ++ Q L+
Sbjct: 83 -----YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQ----QTTSGLA 132
Query: 187 YIHRSIGVCHRDIKPQNLLVN-PHTH---QVKLCDFGSAKVLVKGEPNISYIC----SRY 238
++H S+ + HRD+KP N+L++ P+ H + + DFG K L G + S +
Sbjct: 133 HLH-SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 239 YRAPELIFGATEY--TTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTRE 296
+ APE++ + T +DI+SAGCV ++ + P + + I+ LG +
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVFY-YVISEGSHPFGKSLQRQANIL--LGACS-- 246
Query: 297 EIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ C++P E A +L+ +++ P R +A L HPF
Sbjct: 247 -LDCLHPEKHEDVI-------------------ARELIEKMIAMDPQKRPSAKHVLKHPF 286
Query: 357 FDEL 360
F L
Sbjct: 287 FWSL 290
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 54/305 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 130
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 131 HCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
F+ + + L LEY E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 243
H IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APE
Sbjct: 121 H-GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
L+ + +D+WS G V+ ++ G+ P D D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 216
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDP 363
Y+++K + +PW KI + L+ ++L +P+ R T D ++++
Sbjct: 217 -YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKK 270
Query: 364 NARLP 368
A+ P
Sbjct: 271 GAKRP 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 62/311 (19%)
Query: 72 SYMAERIVGQGSFGVV-----------FQAKCLET--GETVAIKKVLQDKRYKNRELQTM 118
+Y + I+G+G VV + K ++ G + + ++V + + +E+ +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 119 RLLD-HPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
R + HPN++ LK + + T + LV + + + + F+ L +++ + +
Sbjct: 78 RKVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKG-----ELFDYLTEKVTL--SEKE 125
Query: 178 AYQIFRAL----SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+I RAL +H+ + + HRD+KP+N+L++ + +KL DFG + L GE
Sbjct: 126 TRKIMRALLEVICALHK-LNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREV 183
Query: 234 ICSRYYRAPELIFGATE-----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
+ Y APE+I + Y +D+WS G ++ L+ G P F + L I
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI-- 241
Query: 289 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTA 348
M+ NY +F P+ + DLVSR L P R TA
Sbjct: 242 ------------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQKRYTA 278
Query: 349 LDALIHPFFDE 359
+AL HPFF +
Sbjct: 279 EEALAHPFFQQ 289
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 77 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 127
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 128 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 187 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 233
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 234 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 129/303 (42%), Gaps = 55/303 (18%)
Query: 68 KQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 120
K + +Y + +G+G+F VV + TG A K++ K+ R+ Q + R
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 61
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVV-KHFNKLNQRMPMIYVKLY 177
L HPN+V L ++E + LV + V E +V + F I
Sbjct: 62 LQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 112
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYIC 235
QI +++Y H S G+ HR++KP+NLL+ VKL DFG A + E +
Sbjct: 113 --QILESIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 169
Query: 236 SRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTR 295
+ Y +PE + Y+ +DIW+ G ++ L++G P F D +L
Sbjct: 170 TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRL------------ 215
Query: 296 EEIKCMNPNYTEFKFPQIKAHPWHKIFPK--RMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+ QIKA + P+ + PEA L+ +L +P R TA AL
Sbjct: 216 --------------YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261
Query: 354 HPF 356
P+
Sbjct: 262 VPW 264
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 77 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 127
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 128 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 187 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 233
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 234 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 76 ERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDHPNVVSLKHCF 133
E +VG+G+FGVV +AK + VAIK++ + K EL+ + ++HPN+V L
Sbjct: 14 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL-----YAYQIFRALSYI 188
+ + LV+EY +N L+ P+ Y + Q + ++Y+
Sbjct: 72 LNP-------VCLVMEYAEGG-----SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 189 H--RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H + + HRD+KP NLL+ +K+CDFG+A + N S + APE +F
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VF 176
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLF 274
+ Y+ D++S G ++ E++ + F
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 129/303 (42%), Gaps = 55/303 (18%)
Query: 68 KQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 120
K + +Y + +G+G+F VV + TG A K++ K+ R+ Q + R
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 60
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVV-KHFNKLNQRMPMIYVKLY 177
L HPN+V L ++E + LV + V E +V + F I
Sbjct: 61 LQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 111
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYIC 235
QI +++Y H S G+ HR++KP+NLL+ VKL DFG A + E +
Sbjct: 112 --QILESIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 168
Query: 236 SRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTR 295
+ Y +PE + Y+ +DIW+ G ++ L++G P F D +L
Sbjct: 169 TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRL------------ 214
Query: 296 EEIKCMNPNYTEFKFPQIKAHPWHKIFPK--RMPPEAVDLVSRLLQYSPNLRCTALDALI 353
+ QIKA + P+ + PEA L+ +L +P R TA AL
Sbjct: 215 --------------YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 260
Query: 354 HPF 356
P+
Sbjct: 261 VPW 263
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 76 ERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDHPNVVSLKHCF 133
E +VG+G+FGVV +AK + VAIK++ + K EL+ + ++HPN+V L
Sbjct: 13 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL-----YAYQIFRALSYI 188
+ + LV+EY +N L+ P+ Y + Q + ++Y+
Sbjct: 71 LNP-------VCLVMEYAEGG-----SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 189 H--RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H + + HRD+KP NLL+ +K+CDFG+A + N S + APE +F
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VF 175
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLF 274
+ Y+ D++S G ++ E++ + F
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 52/286 (18%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 131
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 132 CFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
F+ + + L LEY E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPEL 244
IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APEL
Sbjct: 122 -GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPEL 177
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ + +D+WS G V+ ++ G+ P D D E
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------- 216
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALD 350
Y+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 217 YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPD 257
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F +V + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY--QIFRAL 185
+L F + TD + L+LE V + F+ L ++ + + + QI +
Sbjct: 72 TLHDIFENKTD-----VVLILELVSGG-----ELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 186 SYIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 242
Y+H S + H D+KP+N+++ N ++KL DFG A + G + + + AP
Sbjct: 122 HYLH-SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
E++ D+WS G + L+ G F G++ + L I +N
Sbjct: 181 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI------------SAVN 227
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
++ E F A D + RLL P R T +L H + +R
Sbjct: 228 YDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274
Query: 363 PNAR 366
N R
Sbjct: 275 RNVR 278
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 48/304 (15%)
Query: 63 RNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR-----ELQT 117
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E+
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 118 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY 177
+ DHPN+V L F+ + L +++E+ V +L + + +++
Sbjct: 88 LASCDHPNIVKLLDAFYYENN-----LWILIEFCAGGAVDAV--MLELERPLTESQIQVV 140
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICS 236
Q AL+Y+H + + HRD+K N+L +KL DFG SAK + +I +
Sbjct: 141 CKQTLDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGT 198
Query: 237 RYYRAPELIFGATE----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y+ APE++ T Y D+WS G + E+ +P
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP-------------------- 238
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
P E +NP K K+ P P R D + + L+ + + R T L
Sbjct: 239 PHHE----LNPMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
Query: 353 IHPF 356
HPF
Sbjct: 293 QHPF 296
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 93
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 94 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 147
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 148 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 205
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 252
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 253 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 304
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 305 PLHTSRVL 312
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 77
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 78 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 132 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 189
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 236
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 237 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 288
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 289 PLHTSRVL 296
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+LE V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 85
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 86 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 140 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 197
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 198 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 244
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 245 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 296
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 297 PLHTSRVL 304
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 129
Query: 133 FFSTTDKDELY-----LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR---- 183
+ + LY L +V+E + + F+++ R + + A +I +
Sbjct: 130 Y------ENLYAGRKCLLIVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y+H SI + HRD+KP+NLL +KL DFG AK + + YY A
Sbjct: 179 AIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE + G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 238 PE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM--- 287
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDEL 360
+++FP + W ++ E L+ LL+ P R T + + HP+
Sbjct: 288 ----GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 335
Query: 361 RDPNARLPSGRFL 373
+ P L + R L
Sbjct: 336 KVPQTPLHTSRVL 348
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 133 FFSTTDKDELY-----LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR---- 183
+ + LY L +V+E + + F+++ R + + A +I +
Sbjct: 80 Y------ENLYAGRKCLLIVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y+H SI + HRD+KP+NLL +KL DFG AK + + YY A
Sbjct: 129 AIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE + G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 188 PE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM--- 237
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDEL 360
+++FP + W ++ E L+ LL+ P R T + + HP+
Sbjct: 238 ----GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 285
Query: 361 RDPNARLPSGRFL 373
+ P L + R L
Sbjct: 286 KVPQTPLHTSRVL 298
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 78
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 79 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 133 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 190
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 191 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 237
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 238 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 289
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 290 PLHTSRVL 297
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 133 FFSTTDKDELY-----LNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR---- 183
+ + LY L +V+E + + F+++ R + + A +I +
Sbjct: 124 Y------ENLYAGRKCLLIVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 184 ALSYIHRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRA 241
A+ Y+H SI + HRD+KP+NLL +KL DFG AK + + YY A
Sbjct: 173 AIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE + G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 232 PE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM--- 281
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDEL 360
+++FP + W ++ E L+ LL+ P R T + + HP+
Sbjct: 282 ----GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 329
Query: 361 RDPNARLPSGRFL 373
+ P L + R L
Sbjct: 330 KVPQTPLHTSRVL 342
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 77 RIVGQGSFGVV----FQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 127
R +G+G FG V + + TGE VA+K + + + +E++ +R L H N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHR--VVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
K T+ + L++E++P + + K+ NK+N + + YA QI + +
Sbjct: 87 KYKGI---CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL----KYAVQICKGM 139
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRA 241
Y+ S HRD+ +N+LV HQVK+ DFG K + + + R ++ A
Sbjct: 140 DYLG-SRQYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE + +++ A D+WS G + EL L DS + +K++G PT ++
Sbjct: 198 PECLM-QSKFYIASDVWSFGVTLHEL-----LTYCDSDSSPMALFLKMIG-PTHGQMTVT 250
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
T + K P P P E L+ + ++ P+ R T+ LI F
Sbjct: 251 RLVNT---LKEGKRLP----CPPNCPDEVYQLMRKCWEFQPSNR-TSFQNLIEGF 297
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 83
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 84 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 138 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 195
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 196 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 242
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 243 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 294
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 295 PLHTSRVL 302
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 84
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 85 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 139 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 196
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 243
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 244 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 295
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 296 PLHTSRVL 303
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 80 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 134 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 191
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 238
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 239 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 290
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 291 PLHTSRVL 298
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 44/249 (17%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 130
++GQG+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVXLLASLNHQYVVRYY 68
Query: 131 HCFFS--------TTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
+ T K + L + EY + H LNQ+ Y +L+ QI
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE-YWRLFR-QIL 126
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEPNI---- 231
ALSYIH S G+ HR++KP N+ ++ + VK+ DFG AK +L N+
Sbjct: 127 EALSYIH-SQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 232 ----SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
S I + Y A E++ G Y ID +S G + E ++P +G ++ V I+
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFSTGXER-VNIL 238
Query: 288 KVLGTPTRE 296
K L + + E
Sbjct: 239 KKLRSVSIE 247
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 77 RIVGQGSFGVV----FQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 127
R +G+G FG V + + TGE VA+K + + + +E++ +R L H N+V
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHR--VVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
K T+ + L++E++P + + K+ NK+N + + YA QI + +
Sbjct: 75 KYKGI---CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL----KYAVQICKGM 127
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRA 241
Y+ S HRD+ +N+LV HQVK+ DFG K + + + R ++ A
Sbjct: 128 DYLG-SRQYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCM 301
PE + +++ A D+WS G + EL L DS + +K++G PT ++
Sbjct: 186 PECLM-QSKFYIASDVWSFGVTLHEL-----LTYCDSDSSPMALFLKMIG-PTHGQMTVT 238
Query: 302 NPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
T + K P P P E L+ + ++ P+ R T+ LI F
Sbjct: 239 RLVNT---LKEGKRLP----CPPNCPDEVYQLMRKCWEFQPSNR-TSFQNLIEGF 285
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 133
+G+GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T L +++EY+ + L++ ++ +I + L Y+H
Sbjct: 75 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILR----EILKGLDYLHSEKK 125
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYT 252
+ HRDIK N+L++ H +VKL DFG A L + +++ + ++ APE+I + Y
Sbjct: 126 I-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYD 182
Query: 253 TAIDIWSAGCVVAELMLGKP 272
+ DIWS G EL G+P
Sbjct: 183 SKADIWSLGITAIELARGEP 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 133
+G+GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T L +++EY+ + L++ ++ +I + L Y+H
Sbjct: 95 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILR----EILKGLDYLHSEKK 145
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYT 252
+ HRDIK N+L++ H +VKL DFG A L + +++ + ++ APE+I + Y
Sbjct: 146 I-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYD 202
Query: 253 TAIDIWSAGCVVAELMLGKP 272
+ DIWS G EL G+P
Sbjct: 203 SKADIWSLGITAIELARGEP 222
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 134/308 (43%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 77
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 78 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + YY APE +
Sbjct: 132 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPE-VL 189
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 236
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 237 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 288
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 289 PLHTSRVL 296
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLKH 131
+G G V+ A+ VAIK + R K RE+ L H N+VS+
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM-- 76
Query: 132 CFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
++D+ Y LV+EY+ T+ ++ L+ + + QI + + H
Sbjct: 77 --IDVDEEDDCYY-LVMEYIEGPTLSEYIESHGPLSVDTAINFTN----QILDGIKHAH- 128
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS----YICSRYYRAPELIF 246
+ + HRDIKPQN+L++ + +K+ DFG AK L E +++ + + Y +PE
Sbjct: 129 DMRIVHRDIKPQNILIDSNK-TLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSPEQAK 185
Query: 247 G-ATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
G AT+ T DI+S G V+ E+++G+P F G++ V
Sbjct: 186 GEATDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 35/279 (12%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHP 124
Y+ ++G+GS+G V + ET A+K + + +E+Q +R L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
NV+ L ++ +K ++Y+ V+EY + ++ + +R P+ Y Q+
Sbjct: 67 NVIQLVDVLYNE-EKQKMYM--VMEYCVCGMQEMLDSVPE--KRFPVCQAHGYFCQLIDG 121
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRA 241
L Y+H S G+ H+DIKP NLL+ +K+ G A+ L + + S ++
Sbjct: 122 LEYLH-SQGIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 242 PELIFGATEYTT-AIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKV--------LGT 292
PE+ G ++ +DIWSAG + + G F GD+ + +L E I G
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-IYKLFENIGKGSYAIPGDCGP 238
Query: 293 PTREEIKCM---NPNYTEFKFPQIKAHPWHKIFPKRMPP 328
P + +K M P F QI+ H W F K+ PP
Sbjct: 239 PLSDLLKGMLEYEPA-KRFSIRQIRQHSW---FRKKHPP 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 133
+G+GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T L +++EY+ + L++ ++ +I + L Y+H
Sbjct: 90 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILR----EILKGLDYLHSEKK 140
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYT 252
+ HRDIK N+L++ H +VKL DFG A L + ++ + ++ APE+I + Y
Sbjct: 141 I-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYD 197
Query: 253 TAIDIWSAGCVVAELMLGKP 272
+ DIWS G EL G+P
Sbjct: 198 SKADIWSLGITAIELARGEP 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 133
+G+GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T L +++EY+ + L++ ++ +I + L Y+H
Sbjct: 75 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILR----EILKGLDYLHSEKK 125
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYT 252
+ HRDIK N+L++ H +VKL DFG A L + ++ + ++ APE+I + Y
Sbjct: 126 I-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYD 182
Query: 253 TAIDIWSAGCVVAELMLGKP 272
+ DIWS G EL G+P
Sbjct: 183 SKADIWSLGITAIELARGEP 202
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 120
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAY 179
L HPN+V + D+ L +V+EY + V+ K Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 180 QIFRALSYIHR-SIG---VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 234
Q+ AL HR S G V HRD+KP N+ ++ VKL DFG A++L E ++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDEDFAKEFV 177
Query: 235 CSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
+ YY +PE + Y DIWS GC++ EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL------QDKRYKNRELQTM-RLLDHPNVVSLKH 131
+G GS+G VF+ + E G A+K+ + +D+ K E+ + ++ HP V L+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ + LYL L + +H +P V Y AL+++H S
Sbjct: 125 AW---EEGGILYLQTEL-----CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH-S 175
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFG--------SAKVLVKGEPNISYICSRYYRAPE 243
G+ H D+KP N+ + P + KL DFG A + +G+P Y APE
Sbjct: 176 QGLVHLDVKPANIFLGPRG-RCKLGDFGLLVELGTAGAGEVQEGDPR--------YMAPE 226
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQL 283
L+ G+ Y TA D++S G + E+ L G G QL
Sbjct: 227 LLQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
+L + + TD + L+ E V + + L + ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILIGELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H S+ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNY 234
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + F A A D + RLL P R T D+L HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 54/304 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F +V + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY--QIFRAL 185
+L F + TD + L+LE V + F+ L ++ + + + QI +
Sbjct: 93 TLHDIFENKTD-----VVLILELVSGG-----ELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 186 SYIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 242
Y+H S + H D+KP+N+++ N ++KL DFG A + G + + + AP
Sbjct: 143 HYLH-SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 201
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
E++ D+WS G + L+ G F G++ + L I +N
Sbjct: 202 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI------------SAVN 248
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRD 362
++ E F A D + RLL P R +L H + +R
Sbjct: 249 YDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRR 295
Query: 363 PNAR 366
N R
Sbjct: 296 RNVR 299
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 35/211 (16%)
Query: 77 RIVGQGSFGVVFQAKCLE-----TGETVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 126
R +G+G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHR--VVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+ K C D+ E L LV+EYVP R + +H L Q + L+A QI
Sbjct: 79 IKYKGC---CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL------LFAQQICEG 129
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------- 237
++Y+H S HR++ +N+L++ + VK+ DFG AK + +G Y R
Sbjct: 130 MAYLH-SQHYIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 184
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
++ APE + ++ A D+WS G + EL+
Sbjct: 185 FWYAPECL-KEYKFYYASDVWSFGVTLYELL 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 38/253 (15%)
Query: 137 TDKDELYLNLVLEYVP-ETVHRVVKHFNKLNQR----MPMIYVKLYAYQIFRALSYIHRS 191
T+ DE+Y+ + EY+ +++ + ++F L++ +P+ +K + + SYIH
Sbjct: 113 TNYDEVYI--IYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 251
+CHRD+KP N+L++ + +VKL DFG ++ +V + S + + PE + Y
Sbjct: 171 KNICHRDVKPSNILMDKNG-RVKLSDFGESEYMVDKKIKGSR-GTYEFMPPEFFSNESSY 228
Query: 252 TTA-IDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 310
A +DIWS G + + + P + LVE+ + T E +
Sbjct: 229 NGAKVDIWSLGICLYVMFYN--VVPFSLKI-SLVELFNNIRTKNIE-------------Y 272
Query: 311 PQIKAHPWHKIFPKR-------MPPEAVDLVSRLLQYSPNLRCTALDALIHPFF-----D 358
P + H + + K+ + E +D + L+ +P R T+ DAL H + +
Sbjct: 273 PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIE 332
Query: 359 ELRDPNARLPSGR 371
+LR+ + L R
Sbjct: 333 DLREFSKELYKKR 345
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 130
++G+GSFG V ++ T E A+K + +D ++ +++ + L P ++
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
H F T D+ L V+EYV ++ H ++ R + YA +I L ++ +
Sbjct: 87 HSCFQTMDR----LYFVMEYV--NGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFL-Q 138
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGAT 249
S G+ +RD+K N++++ H +K+ DFG K + C Y APE+I
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQ 196
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y ++D W+ G ++ E++ G+ F G+ D+L + I
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 233
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 126/308 (40%), Gaps = 38/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K LQD RE++ R P++V +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-XLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + LY + + F+++ R + + A +I + A+ Y+
Sbjct: 124 Y------ENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 178 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 235
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D WS G + L+ G P F + G + G TR +
Sbjct: 236 GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHG------LAISPGXKTR-----IRXGQY 284
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE-LRDPNA 365
EF P+ W ++ E L+ LL+ P R T + HP+ + + P
Sbjct: 285 EFPNPE-----WSEV-----SEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQT 334
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 335 PLHTSRVL 342
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 35/211 (16%)
Query: 77 RIVGQGSFGVVFQAKCLE-----TGETVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 126
R +G+G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHR--VVKHFNKLNQRMPMIYVKLYAYQIFRA 184
+ K C D+ E L LV+EYVP R + +H L Q + L+A QI
Sbjct: 79 IKYKGC---CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL------LFAQQICEG 129
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------- 237
++Y+H + HR++ +N+L++ + VK+ DFG AK + +G Y R
Sbjct: 130 MAYLHAQHYI-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 184
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
++ APE + ++ A D+WS G + EL+
Sbjct: 185 FWYAPECL-KEYKFYYASDVWSFGVTLYELL 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 130
++G+GSFG V ++ T E A+K + +D ++ +++ + L P ++
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
H F T D+ L V+EYV ++ H ++ R + YA +I L ++ +
Sbjct: 408 HSCFQTMDR----LYFVMEYV--NGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFL-Q 459
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGAT 249
S G+ +RD+K N++++ H +K+ DFG K + C Y APE+I
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQ 517
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
Y ++D W+ G ++ E++ G+ F G+ D+L + I
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 554
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 137/311 (44%), Gaps = 46/311 (14%)
Query: 69 QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKNRELQTMRLL----DH 123
+ + + E ++G+G+ V L T + A+K + Q ++R + + +L H
Sbjct: 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 124 PNVVSLKHCFFSTTDKDELYL---NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQ 180
NV+ L ++D YL + + +H+ +HFN+L +
Sbjct: 71 RNVLELI---EFFEEEDRFYLVFEKMRGGSILSHIHKR-RHFNELE-------ASVVVQD 119
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQV---KLCDFG-SAKVLVKGE------PN 230
+ AL ++H G+ HRD+KP+N+L H +QV K+CDFG + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 231 ISYIC-SRYYRAPELIFGATE----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVE 285
+ C S Y APE++ +E Y D+WS G ++ L+ G P F G G D +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR 345
+ P + + + +++FP W I A DL+S+LL R
Sbjct: 238 --RGEACPACQNMLFESIQEGKYEFPD---KDWAHI-----SCAAKDLISKLLVRDAKQR 287
Query: 346 CTALDALIHPF 356
+A L HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 120
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAY 179
L HPN+V + D+ L +V+EY + V+ K Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 180 QIFRALSYIHR-SIG---VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 234
Q+ AL HR S G V HRD+KP N+ ++ VKL DFG A++L +++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFV 177
Query: 235 CSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
+ YY +PE + Y DIWS GC++ EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 120
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 121 LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAY 179
L HPN+V + D+ L +V+EY + V+ K Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 180 QIFRALSYIHR-SIG---VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 234
Q+ AL HR S G V HRD+KP N+ ++ VKL DFG A++L +++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFV 177
Query: 235 CSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
+ YY +PE + Y DIWS GC++ EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 131/308 (42%), Gaps = 61/308 (19%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 128
++G+G F VV + ETG+ A+K V K + RE +L HP++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 129 LKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKL----YAYQIF 182
L T D + L +V E++ + +VK + +Y + Y QI
Sbjct: 93 L----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADA-----GFVYSEAVASHYMRQIL 142
Query: 183 RALSYIHRSIGVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---SYICSR 237
AL Y H + + HRD+KP +L+ ++ VKL FG A L GE + + +
Sbjct: 143 EALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTP 199
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
++ APE++ Y +D+W G ++ L+ G F G ++L E I + +
Sbjct: 200 HFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGK 250
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
K MNP W I A DLV R+L P R T +AL HP+
Sbjct: 251 YK-MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWL 292
Query: 358 DELRDPNA 365
E RD A
Sbjct: 293 KE-RDRYA 299
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+ + L LV+EY+P R + R+ + LY+ QI + + Y+
Sbjct: 78 GVSYGPGRQS---LRLVMEYLPSGCLR--DFLQRHRARLDASRLLLYSSQICKGMEYLG- 131
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 243
S HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE
Sbjct: 132 SRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 187
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++ D+WS G V+ EL
Sbjct: 188 SL-SDNIFSRQSDVWSFGVVLYELF 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+ + L LV+EY+P R + R+ + LY+ QI + + Y+
Sbjct: 79 GVSYGPGRQS---LRLVMEYLPSGCLR--DFLQRHRARLDASRLLLYSSQICKGMEYLG- 132
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 243
S HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE
Sbjct: 133 SRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 188
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++ D+WS G V+ EL
Sbjct: 189 SL-SDNIFSRQSDVWSFGVVLYELF 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+ + L LV+EY+P R + R+ + LY+ QI + + Y+
Sbjct: 75 GVSYGPGRPE---LRLVMEYLPSGCLR--DFLQRHRARLDASRLLLYSSQICKGMEYLG- 128
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 243
S HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE
Sbjct: 129 SRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPE 184
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++ D+WS G V+ EL
Sbjct: 185 SL-SDNIFSRQSDVWSFGVVLYELF 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 79 VGQGSFGVV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 130
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+ + L LV+EY+P R + R+ + LY+ QI + + Y+
Sbjct: 91 GVSYGPGRQS---LRLVMEYLPSGCLR--DFLQRHRARLDASRLLLYSSQICKGMEYLG- 144
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 243
S HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE
Sbjct: 145 SRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 200
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
+ ++ D+WS G V+ EL
Sbjct: 201 SL-SDNIFSRQSDVWSFGVVLYELF 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 48/292 (16%)
Query: 77 RIVGQ-GSFGVVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVSLK 130
I+G+ G FG V++A+ ET +A KV+ K + E + + DHPN+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
F+ + L +++E+ V +L + + +++ Q AL+Y+H
Sbjct: 74 DAFYYENN-----LWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAK-VLVKGEPNISYICSRYYRAPELIFGA 248
+ + HRD+K N+L +KL DFG SAK + S+I + Y+ APE++
Sbjct: 127 N-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 249 TE----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
T Y D+WS G + E+ +P P E +NP
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEP--------------------PHHE----LNPM 220
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
K K+ P P R D + + L+ + + R T L HPF
Sbjct: 221 RVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 131/308 (42%), Gaps = 61/308 (19%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 128
++G+G F VV + ETG+ A+K V K + RE +L HP++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 129 LKHCFFSTTDKDELYLNLVLEYV--PETVHRVVKHFNKLNQRMPMIYVKL----YAYQIF 182
L T D + L +V E++ + +VK + +Y + Y QI
Sbjct: 91 L----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADA-----GFVYSEAVASHYMRQIL 140
Query: 183 RALSYIHRSIGVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---SYICSR 237
AL Y H + + HRD+KP +L+ ++ VKL FG A L GE + + +
Sbjct: 141 EALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTP 197
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREE 297
++ APE++ Y +D+W G ++ L+ G F G ++L E I + +
Sbjct: 198 HFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGK 248
Query: 298 IKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFF 357
K MNP W I A DLV R+L P R T +AL HP+
Sbjct: 249 YK-MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Query: 358 DELRDPNA 365
E RD A
Sbjct: 291 KE-RDRYA 297
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 138/313 (44%), Gaps = 44/313 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFST 136
+++G+G+FG V K T A+K + + + K E R + +V+ C + T
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR--EERDVLVNGDCQWIT 153
Query: 137 T----DKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+DE +L LV++Y ++ +K ++P + Y ++ A+ IH+ +
Sbjct: 154 ALHYAFQDENHLYLVMDYY--VGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ-L 210
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----F 246
HRDIKP N+L++ + H ++L DFGS K+ G S + + Y +PE++
Sbjct: 211 HYVHRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y D WS G + E++ G+ F +S V+ +I+ N+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM----------------NHE 313
Query: 307 E-FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLL-QYSPNLRCTAL-DALIHPFFDELRDP 363
E F+FP + EA DL+ RL+ L + D H FF+ L
Sbjct: 314 ERFQFPS---------HVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWE 364
Query: 364 NARLPSGRFLPPL 376
N R ++P +
Sbjct: 365 NIRNLEAPYIPDV 377
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
Y++Q+ R + ++ S HRD+ +N+L++ + VK+CDFG A+ + K + +
Sbjct: 204 YSFQVARGMEFLS-SRKCIHRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 237 RY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGT 292
R + APE IF Y+T D+WS G ++ E+ LG +PG V++ + +
Sbjct: 262 RLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFCS 313
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL 337
RE ++ P Y+ + QI WH+ +R P +LV +L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELVEKL 356
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 138
VG+GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 119
Query: 139 KDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHR 197
++ ++N+ +E + ++ +++K L + + Y+ Q L Y+H + + H
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLH-TRRILHG 174
Query: 198 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 251
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 233
Query: 252 TTAIDIWSAGCVVAELMLG 270
+DIWS+ C++ ++ G
Sbjct: 234 DAKVDIWSSCCMMLHMLNG 252
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 138/313 (44%), Gaps = 44/313 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFST 136
+++G+G+FG V K T A+K + + + K E R + +V+ C + T
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR--EERDVLVNGDCQWIT 137
Query: 137 T----DKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+DE +L LV++Y ++ +K ++P + Y ++ A+ IH+ +
Sbjct: 138 ALHYAFQDENHLYLVMDYY--VGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ-L 194
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----F 246
HRDIKP N+L++ + H ++L DFGS K+ G S + + Y +PE++
Sbjct: 195 HYVHRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y D WS G + E++ G+ F +S V+ +I+ N+
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM----------------NHE 297
Query: 307 E-FKFPQIKAHPWHKIFPKRMPPEAVDLVSRLL-QYSPNLRCTAL-DALIHPFFDELRDP 363
E F+FP + EA DL+ RL+ L + D H FF+ L
Sbjct: 298 ERFQFPS---------HVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWE 348
Query: 364 NARLPSGRFLPPL 376
N R ++P +
Sbjct: 349 NIRNLEAPYIPDV 361
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 130/331 (39%), Gaps = 75/331 (22%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR-------- 113
G +G Q Y + +G+GS+GVV A E T KVL K+ +
Sbjct: 4 GSSGDCVQLNQYTLKDEIGKGSYGVVKLAYN-ENDNTYYAMKVLSKKKLIRQAGFPRRPP 62
Query: 114 -----------------------ELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEY 150
E+ ++ LDHPNVV L D +E +L +V E
Sbjct: 63 PRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL---DDPNEDHLYMVFEL 119
Query: 151 VPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHT 210
V + V L++ + Y + + + Y+H + HRDIKP NLLV
Sbjct: 120 VNQGPVMEVPTLKPLSEDQ----ARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDG 174
Query: 211 HQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAPELIFGATEYTT--AIDIWSAGCVVAEL 267
H +K+ DFG + + +S + + + APE + + + A+D+W+ G +
Sbjct: 175 H-IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF 233
Query: 268 MLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKR-- 325
+ G+ F E I C++ +IK+ FP +
Sbjct: 234 VFGQCPF-------------------MDERIMCLH--------SKIKSQALE--FPDQPD 264
Query: 326 MPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
+ + DL++R+L +P R + +HP+
Sbjct: 265 IAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 35/211 (16%)
Query: 77 RIVGQGSFGVVFQAKCLE-----TGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNV 126
R +G+G FG V C + TGE VA+K + Q + RE++ +R L H ++
Sbjct: 14 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHR--VVKHFNKLNQRMPMIYVKLYAYQIFRA 184
V K C D+ E + LV+EYVP R + +H L Q + L+A QI
Sbjct: 73 VKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------LFAQQICEG 123
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------- 237
++Y+H + HR + +N+L++ + VK+ DFG AK + +G Y R
Sbjct: 124 MAYLHAQHYI-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 178
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
++ APE + ++ A D+WS G + EL+
Sbjct: 179 FWYAPECL-KECKFYYASDVWSFGVTLYELL 208
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 138
VG+GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 135
Query: 139 KDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHR 197
++ ++N+ +E + ++ +++K L + + Y+ Q L Y+H + + H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLH-TRRILHG 190
Query: 198 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 251
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 249
Query: 252 TTAIDIWSAGCVVAELMLG 270
+DIWS+ C++ ++ G
Sbjct: 250 DAKVDIWSSCCMMLHMLNG 268
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 35/211 (16%)
Query: 77 RIVGQGSFGVVFQAKCLE-----TGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNV 126
R +G+G FG V C + TGE VA+K + Q + RE++ +R L H ++
Sbjct: 15 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVPETVHR--VVKHFNKLNQRMPMIYVKLYAYQIFRA 184
V K C D+ E + LV+EYVP R + +H L Q + L+A QI
Sbjct: 74 VKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------LFAQQICEG 124
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------- 237
++Y+H + HR + +N+L++ + VK+ DFG AK + +G Y R
Sbjct: 125 MAYLHAQHYI-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 179
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
++ APE + ++ A D+WS G + EL+
Sbjct: 180 FWYAPECL-KECKFYYASDVWSFGVTLYELL 209
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 138
+G+GSFG V + + +TG A+KKV + + ++ EL L P +V L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAV----- 154
Query: 139 KDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHR 197
++ ++N+ +E + ++ ++VK L + + Y+ Q L Y+H S + H
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLH-SRRILHG 209
Query: 198 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 251
D+K N+L++ LCDFG A L S + Y + APE++ G +
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-C 268
Query: 252 TTAIDIWSAGCVVAELMLG 270
+D+WS+ C++ ++ G
Sbjct: 269 DAKVDVWSSCCMMLHMLNG 287
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR----LLDHPNVVSLKHC 132
+++G+G+FG V K + A+K + + + K E R +L + + +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
++ D + LYL V++Y ++ +K R+P + Y ++ A+ +H+ +
Sbjct: 140 HYAFQDDNNLYL--VMDYY--VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ-L 194
Query: 193 GVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----F 246
HRDIKP N+L++ + H ++L DFGS K++ G S + + Y +PE++
Sbjct: 195 HYVHRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
G Y D WS G + E++ G+ F +S V+ +I+
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 39/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCF 133
++++++G G G V + TG+ A+K + + + + P++V + +
Sbjct: 13 LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVY 72
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYIH 189
+ L +++E + + F+++ +R + + A +I R A+ ++H
Sbjct: 73 ENMHHGKRCLL-IIMECMEGG-----ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 126
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIF 246
S + HRD+KP+NLL +KL DFG AK + + C + YY APE +
Sbjct: 127 -SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPE-VL 182
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F ++G + + + I+
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRRIRL-----G 229
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE-LRDPNA 365
++ FP + W ++ +A L+ LL+ P R T + HP+ ++ + P
Sbjct: 230 QYGFPNPE---WSEV-----SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 281
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 282 PLHTARVL 289
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 39/308 (12%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCF 133
++++++G G G V + TG+ A+K + + + + P++V + +
Sbjct: 32 LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVY 91
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYIH 189
+ L +++E + + F+++ +R + + A +I R A+ ++H
Sbjct: 92 ENMHHGKRCLL-IIMECMEGG-----ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIF 246
S + HRD+KP+NLL +KL DFG AK + + C + YY APE +
Sbjct: 146 -SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPE-VL 201
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
G +Y + D+WS G ++ L+ G P F ++G + + + I+
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRRIRL-----G 248
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE-LRDPNA 365
++ FP + W ++ +A L+ LL+ P R T + HP+ ++ + P
Sbjct: 249 QYGFPNPE---WSEV-----SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 300
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 301 PLHTARVL 308
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 133
+G+GSFG V++ T E VAIK + + +E+ + D P + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
+T L +++EY+ + L + Y+ +I + L Y+H
Sbjct: 87 LKSTK-----LWIIMEYLGGGSALDLLKPGPLEE----TYIATILREILKGLDYLHSERK 137
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYT 252
+ HRDIK N+L++ VKL DFG A L + ++ + ++ APE+I + Y
Sbjct: 138 I-HRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYD 194
Query: 253 TAIDIWSAGCVVAELMLGKP 272
DIWS G EL G+P
Sbjct: 195 FKADIWSLGITAIELAKGEP 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 39/226 (17%)
Query: 64 NGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTM 118
G+ Q S M+ +G G+FG V+ A E + V +K KVL+D ++ +L +
Sbjct: 19 EGEYSQKYSTMSP--LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV 76
Query: 119 RL-------LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLN----- 166
L ++H N++ + F +++ + LV+E KH + L+
Sbjct: 77 TLEIAILSRVEHANIIKVLDIF-----ENQGFFQLVME----------KHGSGLDLFAFI 121
Query: 167 QRMPMIYVKLYAY---QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 223
R P + L +Y Q+ A+ Y+ R + HRDIK +N+++ +KL DFGSA
Sbjct: 122 DRHPRLDEPLASYIFRQLVSAVGYL-RLKDIIHRDIKDENIVI-AEDFTIKLIDFGSAAY 179
Query: 224 LVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELML 269
L +G+ ++ + Y APE++ G +++WS G + L+
Sbjct: 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 68/315 (21%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL---------QTMRLLDHPNVVSL 129
+G+G FGVVF+AK AIK++ R NREL + + L+HP +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 130 KHCFF--STTDK-----DELYLNLVLEYV-PETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
+ + +TT+K ++YL + ++ E + + + +R + + ++ QI
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL-QI 127
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-------PNISY- 233
A+ ++H S G+ HRD+KP N+ VK+ DFG + + E P +Y
Sbjct: 128 AEAVEFLH-SKGLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 234 -----ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIK 288
+ ++ Y +PE I G + Y+ +DI+S G ++ EL L+P + ++++ +
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLTD 239
Query: 289 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTA 348
V KFP +F ++ P E V +V +L SP R A
Sbjct: 240 V----------------RNLKFP--------PLFTQKYPCEYV-MVQDMLSPSPMERPEA 274
Query: 349 LDALIHPFFDELRDP 363
++ + + F++L P
Sbjct: 275 INIIENAVFEDLDFP 289
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 138
+G+GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 133
Query: 139 KDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHR 197
++ ++N+ +E + ++ +++K L + + Y+ Q L Y+H + + H
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLH-TRRILHG 188
Query: 198 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 251
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 247
Query: 252 TTAIDIWSAGCVVAELMLG 270
+DIWS+ C++ ++ G
Sbjct: 248 DAKVDIWSSCCMMLHMLNG 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 46/311 (14%)
Query: 69 QTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKNRELQTMRLL----DH 123
+ + + E ++G+G+ V L T + A+K + Q ++R + + +L H
Sbjct: 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 124 PNVVSLKHCFFSTTDKDELYL---NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQ 180
NV+ L ++D YL + + +H+ +HFN+L +
Sbjct: 71 RNVLELI---EFFEEEDRFYLVFEKMRGGSILSHIHKR-RHFNELE-------ASVVVQD 119
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQV---KLCDFG-SAKVLVKGE------PN 230
+ AL ++H G+ HRD+KP+N+L H +QV K+CDF + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 231 ISYIC-SRYYRAPELIFGATE----YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVE 285
+ C S Y APE++ +E Y D+WS G ++ L+ G P F G G D +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLR 345
+ P + + + +++FP W I A DL+S+LL R
Sbjct: 238 --RGEACPACQNMLFESIQEGKYEFPD---KDWAHI-----SCAAKDLISKLLVRDAKQR 287
Query: 346 CTALDALIHPF 356
+A L HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 28/226 (12%)
Query: 65 GQPKQTIS---YMAERIVGQGSFGVVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE---- 114
G P+ I+ + RI+G+G FG V++ GE VA+K +D N+E
Sbjct: 15 GSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 74
Query: 115 -LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY 173
M+ LDHP++V L +++ ++ + L E H + ++ N L ++
Sbjct: 75 EAVIMKNLDHPHIVKL----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLK----VLT 126
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ LY+ QI +A++Y+ SI HRDI +N+LV VKL DFG ++ ++ E
Sbjct: 127 LVLYSLQICKAMAYLE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKA 183
Query: 234 ICSRY---YRAPELIFGATEYTTAIDIWS-AGCVVAELMLGK-PLF 274
+R + +PE I +TTA D+W A C+ L GK P F
Sbjct: 184 SVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 138
+G+GSFG V + + +TG A+KKV + + ++ EL L P +V L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAV----- 135
Query: 139 KDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHR 197
++ ++N+ +E + ++ ++VK L + + Y+ Q L Y+H S + H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLH-SRRILHG 190
Query: 198 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 251
D+K N+L++ LCDFG A L + Y + APE++ G +
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-C 249
Query: 252 TTAIDIWSAGCVVAELMLG 270
+D+WS+ C++ ++ G
Sbjct: 250 DAKVDVWSSCCMMLHMLNG 268
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 47/283 (16%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 129
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 130 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 188 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 279 GVDQ-LVEIIKVLGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 318
+ + V + + + + I+ C+ ++ F +I+ HPW
Sbjct: 247 EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL 121
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 35 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 122 DHPNVVSLKHC------------FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRM 169
VV LK +F D L+LE PE V + F+ + +R
Sbjct: 94 PM-EVVLLKKVSSGFSGVIRLLDWFERPDS----FVLILER-PEPVQDL---FDFITERG 144
Query: 170 PMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG 227
+ + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 145 ALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKD 202
Query: 228 EPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQ-LVEI 286
+ +R Y PE I + + +WS G ++ +++ G F D + + V
Sbjct: 203 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF 262
Query: 287 IKVLGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 318
+ + + + I+ C+ ++ F +I+ HPW
Sbjct: 263 RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 54/294 (18%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 127
+G G F +V + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY--QIFRAL 185
+L F + TD + L+LE V + F+ L ++ + + + QI +
Sbjct: 79 TLHDIFENKTD-----VVLILELVSGG-----ELFDFLAEKESLTEDEATQFLKQILDGV 128
Query: 186 SYIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 242
Y+H S + H D+KP+N+++ N ++KL DFG A + G + + + AP
Sbjct: 129 HYLH-SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
E++ D+WS G + L+ G F G++ + L I +N
Sbjct: 188 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT------------NISAVN 234
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++ E F A D + RLL P R +L H +
Sbjct: 235 YDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMXIAQSLEHSW 275
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 53/294 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-MRLL----DHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + +++L H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETVHRVVKHFNKLNQRMPM 171
+L + C F YL E+VP + K F L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKPEDLYKDFLTLE----- 148
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 149 -HLIXYSFQVAKGMEFL-ASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXV 205
Query: 232 SYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEII 287
+R + APE IF YT D+WS G ++ E+ LG +PG V+I
Sbjct: 206 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 257
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
+ +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 310
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL 121
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 122 DHPNVVSLKHC------------FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRM 169
VV LK +F D L+LE PE V + F+ + +R
Sbjct: 75 PM-EVVLLKKVSSGFSGVIRLLDWFERPDS----FVLILER-PEPVQDL---FDFITERG 125
Query: 170 PMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG 227
+ + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 126 ALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKD 183
Query: 228 EPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 184 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 47/283 (16%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 130
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 131 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 189 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 279 G-VDQLVEIIKVLGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 318
+ V + + + + I+ C+ ++ F +I+ HPW
Sbjct: 248 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 129
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 130 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 188 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 279 GV 280
+
Sbjct: 247 EI 248
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL 121
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 122 DHPNVVSLKHC------------FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRM 169
VV LK +F D L+LE PE V + F+ + +R
Sbjct: 74 PM-EVVLLKKVSSGFSGVIRLLDWFERPDS----FVLILER-PEPVQDL---FDFITERG 124
Query: 170 PMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG 227
+ + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 125 ALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKD 182
Query: 228 EPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 183 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 128
+G G F +V + + TG A K K Q + + RE+ +R + HPN+++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY--QIFRALS 186
L + + TD + L+LE V + F+ L Q+ + + ++ QI ++
Sbjct: 80 LHDVYENRTD-----VVLILELVSGG-----ELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H + + H D+KP+N+++ N +KL DFG A + G + + + APE
Sbjct: 130 YLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV-------------- 233
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++ + + F + A D + +LL R T +AL HP+
Sbjct: 234 -----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 117
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 118 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 176 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
Query: 279 GV 280
+
Sbjct: 235 EI 236
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL 121
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 122 DHPNVVSLKHC------------FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRM 169
VV LK +F D L+LE PE V + F+ + +R
Sbjct: 75 PM-EVVLLKKVSSGFSGVIRLLDWFERPDS----FVLILER-PEPVQDL---FDFITERG 125
Query: 170 PMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG 227
+ + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 126 ALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKD 183
Query: 228 EPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 184 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 144
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 145 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 203 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 279 GV 280
+
Sbjct: 262 EI 263
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 47/283 (16%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 130
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 131 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 189 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 279 G-VDQLVEIIKVLGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 318
+ V + + + + I+ C+ ++ F +I+ HPW
Sbjct: 248 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 47/283 (16%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 129
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 130 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 188 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 279 G-VDQLVEIIKVLGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 318
+ V + + + + I+ C+ ++ F +I+ HPW
Sbjct: 247 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 116
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 117 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 175 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
Query: 279 GV 280
+
Sbjct: 234 EI 235
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 47/283 (16%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 129
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 130 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 188 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 279 G-VDQLVEIIKVLGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 318
+ V + + + + I+ C+ ++ F +I+ HPW
Sbjct: 247 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 47/283 (16%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 144
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 145 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 203 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 279 GVDQ-LVEIIKVLGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 318
+ + V + + + + I+ C+ ++ F +I+ HPW
Sbjct: 262 EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 130
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 131 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 189 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 279 GV 280
+
Sbjct: 248 EI 249
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 48 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 149
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 150 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 207
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 208 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 266
Query: 279 GV 280
+
Sbjct: 267 EI 268
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 62 GRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL------ 115
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 116 ---------------QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVK 160
+RLLD +F D L+LE PE V +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL-- 130
Query: 161 HFNKLNQRMPMI--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDF 218
F+ + +R + + + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DF
Sbjct: 131 -FDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 219 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDS 278
GS L+K + +R Y PE I + + +WS G ++ +++ G F D
Sbjct: 189 GSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 279 GV 280
+
Sbjct: 248 EI 249
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGET---VAIKKV-----LQDKRYKNRELQTM 118
P + + ++R++G+G FGVV+ + ++ + AIK + +Q RE M
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLM 76
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL-Y 177
R L+HPNV++L + L P H + F + QR P + + +
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLL-------PYMCHGDLLQFIRSPQRNPTVKDLISF 129
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Q+ R + Y+ V HRD+ +N +++ + VK+ DFG A+ ++ E S R
Sbjct: 130 GLQVARGMEYLAEQKFV-HRDLAARNCMLD-ESFTVKVADFGLARDILDRE-YYSVQQHR 186
Query: 238 YYRAPELIFGATE------YTTAIDIWSAGCVVAELM 268
+ R P + + A E +TT D+WS G ++ EL+
Sbjct: 187 HARLP-VKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 77 RIVGQGSFGVVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVS 128
RI+G+G FG V++ GE VA+K +D N+E M+ LDHP++V
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L +++ ++ + L E H + ++ N L ++ + LY+ QI +A++Y+
Sbjct: 78 L----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLK----VLTLVLYSLQICKAMAYL 129
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELI 245
SI HRDI +N+LV VKL DFG ++ ++ E +R + +PE I
Sbjct: 130 E-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI 186
Query: 246 FGATEYTTAIDIWS-AGCVVAELMLGK-PLF 274
+TTA D+W A C+ L GK P F
Sbjct: 187 -NFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 27/202 (13%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 132
+G GSFG V +A+ G VA+K +++ + R E+ M+ L HPN+V
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH-RS 191
F L++V EY+ + H + +++ AY + + ++Y+H R+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELI 245
+ HRD+K NLLV+ + VK+CDFG +++ ++ S+ + APE++
Sbjct: 158 PPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----XFLXSKXAAGTPEWMAPEVL 211
Query: 246 FGATEYTTAIDIWSAGCVVAEL 267
+ D++S G ++ EL
Sbjct: 212 RDEPSNEKS-DVYSFGVILWEL 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 77 RIVGQGSFGVVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVS 128
RI+G+G FG V++ GE VA+K +D N+E M+ LDHP++V
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L +++ ++ + L E H + ++ N L ++ + LY+ QI +A++Y+
Sbjct: 74 L----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLK----VLTLVLYSLQICKAMAYL 125
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELI 245
SI HRDI +N+LV VKL DFG ++ ++ E +R + +PE I
Sbjct: 126 E-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI 182
Query: 246 FGATEYTTAIDIWS-AGCVVAELMLGK-PLF 274
+TTA D+W A C+ L GK P F
Sbjct: 183 -NFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 127
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVKLYAYQIFRAL 185
S D E + VL + E + V F+ + +R + + + +Q+ A+
Sbjct: 70 SGFSGVIRLLDWFERPDSFVL--ILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
+ H + GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 128 RHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 185
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ + +WS G ++ +++ G F D +
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 113/297 (38%), Gaps = 67/297 (22%)
Query: 76 ERIVGQGSFGVVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLK 130
ERI G+GSFG VF+ T + VAIK + + +E+ + D V
Sbjct: 29 ERI-GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
+ + L +++EY+ + ++ +K +I + L Y+H
Sbjct: 88 GSYLKGSK-----LWIIMEYLGGGSALDLLRAGPFDEFQIATMLK----EILKGLDYLHS 138
Query: 191 SIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGAT 249
+ HRDIK N+L++ VKL DFG A L + +++ + ++ APE+I +
Sbjct: 139 EKKI-HRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQS 195
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
Y + DIWS G EL G+P
Sbjct: 196 AYDSKADIWSLGITAIELAKGEP------------------------------------- 218
Query: 310 FPQIKAHPWHKIF--PKRMPPEAV--------DLVSRLLQYSPNLRCTALDALIHPF 356
P HP +F PK PP V + + L P+ R TA + L H F
Sbjct: 219 -PNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD---------- 122
Y ++G+G FG VF L VAIK + +NR L L D
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVI-----PRNRVLGWSPLSDSVTCPLEVAL 87
Query: 123 ---------HPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY 173
HP V+ L F + E ++ LVLE P + F+ + ++ P+
Sbjct: 88 LWKVGAGGGHPGVIRLLDWF----ETQEGFM-LVLER-PLPAQDL---FDYITEKGPLGE 138
Query: 174 --VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ + Q+ A+ + H S GV HRDIK +N+L++ KL DFGS L+ EP
Sbjct: 139 GPSRCFFGQVVAAIQHCH-SRGVVHRDIKDENILIDLRRGCAKLIDFGSG-ALLHDEPYT 196
Query: 232 SYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLG 270
+ +R Y PE I + +WS G ++ +++ G
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 27/202 (13%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 132
+G GSFG V +A+ G VA+K +++ + R E+ M+ L HPN+V
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH-RS 191
F L++V EY+ + H + +++ AY + + ++Y+H R+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELI 245
+ HR++K NLLV+ + VK+CDFG +++ +++ S+ + APE++
Sbjct: 158 PPIVHRNLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----TFLSSKSAAGTPEWMAPEVL 211
Query: 246 FGATEYTTAIDIWSAGCVVAEL 267
+ D++S G ++ EL
Sbjct: 212 RDEPSNEKS-DVYSFGVILWEL 232
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK---KVLQDKRYKNR------ELQTMRLLDHPNVV 127
+++G G FG V + + GE++ I KV++DK + + + LDH ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++ L LV +Y+P + V +H L P + + + QI + +
Sbjct: 97 RLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALG---PQLLLN-WGVQIAKGM 146
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
Y+ G+ HR++ +N+L+ + QV++ DFG A +L + + Y ++ + A
Sbjct: 147 YYLEEH-GMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 243 ELI-FGATEYTTAIDIWSAGCVVAELM 268
E I FG +YT D+WS G V ELM
Sbjct: 205 ESIHFG--KYTHQSDVWSYGVTVWELM 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 41/287 (14%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 128 SLKHCFFSTTDKDELYLNLVLE---------YVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
+L K L +++E Y+ + V + + + + ++ Y+
Sbjct: 95 NL----LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
+Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K + +R
Sbjct: 151 FQVAKGMEFL-ASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 239 ---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGTPT 294
+ APE IF YT D+WS G ++ E+ LG +PG V+I +
Sbjct: 209 PLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRL 260
Query: 295 REEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
+E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 306
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 30/215 (13%)
Query: 77 RIVGQGSFGVVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 456 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ T VKL DFG ++ + E + Y S+ + AP
Sbjct: 507 LE-SKRFVHRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 561
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPG 276
E I +T+A D+W G C+ LM G F G
Sbjct: 562 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 77 RIVGQGSFGVVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 76 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ T VKL DFG ++ + E + Y S+ + AP
Sbjct: 127 LE-SKRFVHRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 181
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPGDSGVDQLVEI 286
E I +T+A D+W G C+ LM G F G D + I
Sbjct: 182 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK---KVLQDKRYKNR------ELQTMRLLDHPNVV 127
+++G G FG V + + GE++ I KV++DK + + + LDH ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++ L LV +Y+P + V +H L P + + + QI + +
Sbjct: 79 RLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALG---PQLLLN-WGVQIAKGM 128
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
Y+ G+ HR++ +N+L+ + QV++ DFG A +L + + Y ++ + A
Sbjct: 129 YYLEEH-GMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 243 ELI-FGATEYTTAIDIWSAGCVVAELM 268
E I FG +YT D+WS G V ELM
Sbjct: 187 ESIHFG--KYTHQSDVWSYGVTVWELM 211
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTMRLLDHPNVV 127
++ I+GQG+ VF+ + +TG+ AIK L+ + RE + ++ L+H N+V
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L TT + ++ L++E+ P V +P + + +++
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 188 IHRSIGVCHRDIKPQNLL--VNPHTHQV-KLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+ R G+ HR+IKP N++ + V KL DFG+A+ L E +S + Y P++
Sbjct: 128 L-RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 245 IFGAT-------EYTTAIDIWSAGCVVAELMLG 270
A +Y +D+WS G G
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL----------------- 115
Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 116 ----QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+RLLD +F D L+LE PE V + F+ + +R +
Sbjct: 70 SGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL---FDFITERGAL 111
Query: 172 I--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 112 QEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 169
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 127
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVKLYAYQIFRAL 185
S D E + VL + E V F+ + +R + + + +Q+ A+
Sbjct: 93 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 150
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
+ H + GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 151 RHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 208
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ + +WS G ++ +++ G F D +
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL----------------- 115
Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 116 ----QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+RLLD +F D L+LE PE V + F+ + +R +
Sbjct: 71 SGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL---FDFITERGAL 112
Query: 172 I--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 113 QEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 170
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK---KVLQDKRYKNRELQ------TMRLLDHPNVV 127
+++G G+FG V++ + GETV I K+L + ++ M +DHP++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L S T + LV + +P H +K N ++ + QI + + Y
Sbjct: 104 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN--WCVQIAKGMMY 155
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPEL 244
+ + HRD+ +N+LV H VK+ DFG A++L E + + + A E
Sbjct: 156 LEER-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 245 IFGATEYTTAIDIWSAGCVVAELML--GKP 272
I ++T D+WS G + ELM GKP
Sbjct: 214 IH-YRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL----------------- 115
Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 116 ----QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+RLLD +F D L+LE PE V + F+ + +R +
Sbjct: 71 SGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL---FDFITERGAL 112
Query: 172 I--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 113 QEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 170
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 127
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVKLYAYQIFRAL 185
S D E + VL + E V F+ + +R + + + +Q+ A+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 245
+ H + GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 129 RHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 186
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ + +WS G ++ +++ G F D +
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSLKHCFFS 135
+G G FG V++ + TVA+K + +D +E M+ + HPN+V L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL---LGV 75
Query: 136 TTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY-AYQIFRALSYIHRSIGV 194
T + Y ++ E++ T ++ + + N++ V LY A QI A+ Y+ +
Sbjct: 76 CTREPPFY--IITEFM--TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NF 130
Query: 195 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEY 251
HRD+ +N LV H VK+ DFG ++ L+ G+ ++ +++ + APE + ++
Sbjct: 131 IHRDLAARNCLVG-ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESL-AYNKF 187
Query: 252 TTAIDIWSAGCVVAEL-MLGKPLFPG 276
+ D+W+ G ++ E+ G +PG
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL----------------- 115
Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 116 ----QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+RLLD +F D L+LE PE V + F+ + +R +
Sbjct: 66 SGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL---FDFITERGAL 107
Query: 172 I--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 108 QEELARSFFWQVLEAVRHCH-NXGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 165
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL----------------- 115
Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 116 ----QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+RLLD +F D L+LE PE V + F+ + +R +
Sbjct: 69 SGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL---FDFITERGAL 110
Query: 172 I--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 111 QEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 168
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 169 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 46/272 (16%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL----------------- 115
Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 116 ----QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+RLLD +F D L+LE PE V + F+ + +R +
Sbjct: 66 SGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL---FDFITERGAL 107
Query: 172 I--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 108 QEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 165
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQ-LVEIIK 288
+ +R Y PE I + + +WS G ++ +++ G F D + + V +
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 225
Query: 289 VLGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 318
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 226 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL----------------- 115
Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 116 ----QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+RLLD +F D L+LE PE V + F+ + +R +
Sbjct: 66 SGFSGVIRLLD----------WFERPDS----FVLILER-PEPVQDL---FDFITERGAL 107
Query: 172 I--YVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ + +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K
Sbjct: 108 QEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 165
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
+ +R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIK---KVLQDKRYKNRELQ------TMRLLDHPNVV 127
+++G G+FG V++ + GETV I K+L + ++ M +DHP++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L S T + LV + +P H +K N ++ + QI + + Y
Sbjct: 81 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN--WCVQIAKGMMY 132
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPEL 244
+ + HRD+ +N+LV H VK+ DFG A++L E + + + A E
Sbjct: 133 LEER-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 245 IFGATEYTTAIDIWSAGCVVAELML--GKP 272
I ++T D+WS G + ELM GKP
Sbjct: 191 IH-YRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 54/295 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVP-ETVHRVVKHFNKLNQRMP 170
+L + C F YL E+VP +T + K F L
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKTPEDLYKDFLTLE---- 148
Query: 171 MIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN 230
++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 149 --HLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDX 204
Query: 231 ISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEI 286
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+I
Sbjct: 205 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKI 256
Query: 287 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
+ +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 310
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTMRLLDHPNVV 127
++ I+GQG+ VF+ + +TG+ AIK L+ + RE + ++ L+H N+V
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L TT + ++ L++E+ P V +P + + +++
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 188 IHRSIGVCHRDIKPQNLL--VNPHTHQV-KLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+ R G+ HR+IKP N++ + V KL DFG+A+ L E + + Y P++
Sbjct: 128 L-RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
Query: 245 IFGAT-------EYTTAIDIWSAGCV 263
A +Y +D+WS G
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVT 212
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 50/292 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 128
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L + + TD + L+LE V + + L++ ++K QI ++Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 188 IHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+H + + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ D+WS G + L+ G F GD+ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--------------- 233
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++ + + F + A D + +LL R T +AL HP+
Sbjct: 234 ----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 82 RLLGICLTST------VQLIMQLMPFGXLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 131
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 132 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 190 ESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 30/215 (13%)
Query: 77 RIVGQGSFGVVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 456 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 507 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 561
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPG 276
E I +T+A D+W G C+ LM G F G
Sbjct: 562 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 81 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 132 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 186
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPGDSGVDQLVEI 286
E I +T+A D+W G C+ LM G F G D + I
Sbjct: 187 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 50/292 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 128
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L + + TD + L+LE V + + L++ ++K QI ++Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 188 IHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+H + + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ D+WS G + L+ G F GD+ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--------------- 233
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++ + + F + A D + +LL R T +AL HP+
Sbjct: 234 ----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 128
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L + + TD + L+LE V + + L++ ++K QI ++Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 188 IHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+H + + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ D+WS G + L+ G F GD+ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--------------- 233
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++ + + F A D + +LL R T +AL HP+
Sbjct: 234 ----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 77 RIVGQGSFGVVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 76 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 127 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 181
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPGDSGVDQLVEI 286
E I +T+A D+W G C+ LM G F G D + I
Sbjct: 182 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 73 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 124 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 178
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPGDSGVDQLVEI 286
E I +T+A D+W G C+ LM G F G D + I
Sbjct: 179 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 30/215 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 79 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 130 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 184
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPG 276
E I +T+A D+W G C+ LM G F G
Sbjct: 185 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQG 218
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 78 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKYSLDLASLILYAYQLSTALAY 128
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 129 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 183
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPGDSGVDQLVEI 286
E I +T+A D+W G C+ LM G F G D + I
Sbjct: 184 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 121/293 (41%), Gaps = 52/293 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 128
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAY--QIFRALS 186
L + + TD + L+LE V + F+ L Q+ + + ++ QI ++
Sbjct: 80 LHDVYENRTD-----VVLILELVSGG-----ELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 187 YIHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 243
Y+H + + H D+KP+N+++ N +KL DFG A + G + + + APE
Sbjct: 130 YLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 244 LIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNP 303
++ D+WS G + L+ G F GD+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV-------------- 233
Query: 304 NYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++ + + F A D + +LL R T +AL HP+
Sbjct: 234 -----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 104 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKYSLDLASLILYAYQLSTALAY 154
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 155 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 209
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPGDSGVDQLVEI 286
E I +T+A D+W G C+ LM G F G D + I
Sbjct: 210 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 132
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 133 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 191 ESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETV--HRVVKHFNKLNQRM 169
+L + C F YL E+VP V + K F +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKVAPEDLYKDF------L 136
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ ++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 137 TLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPD 194
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 246
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 301
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETV--HRVVKHFNKLNQRM 169
+L + C F YL E+VP V + K F L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKVAPEDLYKDFLTLE--- 148
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 149 ---HLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPD 203
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 255
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 310
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 76 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ S HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 127 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 181
Query: 243 ELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPGDSGVDQLVEI 286
E I +T+A D+W G C+ LM G F G D + I
Sbjct: 182 ESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVP--ETVHRVVKHFNKLNQRM 169
+L + C F YL E+VP E + K F L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKEAPEDLYKDFLTLE--- 150
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 151 ---HLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 205
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 257
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 258 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 312
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 132
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 133 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 191 ESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETV--HRVVKHFNKLNQRM 169
+L + C F YL E+VP V + K F +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLST---YLRSKRNEFVPYKVAPEDLYKDF------L 136
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ ++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 137 TLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPD 194
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 246
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 301
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETV--HRVVKHFNKLNQRM 169
+L + C F YL E+VP V + K F L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKVAPEDLYKDFLTLE--- 148
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 149 ---HLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 203
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 255
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 310
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 85 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 134
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 135 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 193 ESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 128
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L + + TD + L+LE V + + L++ ++K QI ++Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 188 IHRSIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 244
+H + + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPN 304
+ D+WS G + L+ G F GD+ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--------------- 233
Query: 305 YTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF 356
++ + + F A D + +LL R T +AL HP+
Sbjct: 234 ----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 133/330 (40%), Gaps = 55/330 (16%)
Query: 64 NGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNR--ELQ 116
QP ++ R++G+G FG VF + TG+ A KK+ + + Y+ E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 117 TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--- 173
+ + +VSL + F + TD L LV+ + R H +++ P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-S 232
Y QI L ++H+ + +RD+KP+N+L++ + V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y + + APEL+ G EY ++D ++ G L E+I G
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVT-------------------LYEMIAARGP 388
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSP----NLRCTA 348
K N + Q +P + P + D LLQ P R +
Sbjct: 389 FRARGEKVENKELKQRVLEQA------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 349 LDAL-IHPFFDELRDPNAR-LPSGRFLPPL 376
D L HP F RD + R L +G PP
Sbjct: 443 CDGLRTHPLF---RDISWRQLEAGMLTPPF 469
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 133/330 (40%), Gaps = 55/330 (16%)
Query: 64 NGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNR--ELQ 116
QP ++ R++G+G FG VF + TG+ A KK+ + + Y+ E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 117 TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--- 173
+ + +VSL + F + TD L LV+ + R H +++ P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-S 232
Y QI L ++H+ + +RD+KP+N+L++ + V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y + + APEL+ G EY ++D ++ G L E+I G
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVT-------------------LYEMIAARGP 388
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSP----NLRCTA 348
K N + Q +P + P + D LLQ P R +
Sbjct: 389 FRARGEKVENKELKQRVLEQA------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 349 LDAL-IHPFFDELRDPNAR-LPSGRFLPPL 376
D L HP F RD + R L +G PP
Sbjct: 443 CDGLRTHPLF---RDISWRQLEAGMLTPPF 469
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDH-PNV 126
+ + +G+G F VV Q TG+ A K + + +R ++ E+ + L P V
Sbjct: 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
++L + +T++ + L+LEY E + ++ +I + QI
Sbjct: 92 INLHEVYENTSE-----IILILEYAAGGEIFSLCLPELAEMVSENDVIRL---IKQILEG 143
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPH--THQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 242
+ Y+H++ + H D+KPQN+L++ +K+ DFG ++ + + + Y AP
Sbjct: 144 VYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMN 302
E I TTA D+W+ G + L+ F G+ + + I +V N
Sbjct: 203 E-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV------------N 249
Query: 303 PNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
+Y+E F + A D + LL +P R TA L H + +
Sbjct: 250 VDYSEETFSSVSQL-------------ATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 133/330 (40%), Gaps = 55/330 (16%)
Query: 64 NGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNR--ELQ 116
QP ++ R++G+G FG VF + TG+ A KK+ + + Y+ E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 117 TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--- 173
+ + +VSL + F + TD L LV+ + R H +++ P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-S 232
Y QI L ++H+ + +RD+KP+N+L++ + V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y + + APEL+ G EY ++D ++ G L E+I G
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVT-------------------LYEMIAARGP 388
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSP----NLRCTA 348
K N + Q +P + P + D LLQ P R +
Sbjct: 389 FRARGEKVENKELKQRVLEQA------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 349 LDAL-IHPFFDELRDPNAR-LPSGRFLPPL 376
D L HP F RD + R L +G PP
Sbjct: 443 CDGLRTHPLF---RDISWRQLEAGMLTPPF 469
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 133/330 (40%), Gaps = 55/330 (16%)
Query: 64 NGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNR--ELQ 116
QP ++ R++G+G FG VF + TG+ A KK+ + + Y+ E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 117 TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY--- 173
+ + +VSL + F + TD L LV+ + R H +++ P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-S 232
Y QI L ++H+ + +RD+KP+N+L++ + V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 233 YICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
Y + + APEL+ G EY ++D ++ G L E+I G
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVT-------------------LYEMIAARGP 388
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSP----NLRCTA 348
K N + Q +P + P + D LLQ P R +
Sbjct: 389 FRARGEKVENKELKQRVLEQA------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 349 LDAL-IHPFFDELRDPNAR-LPSGRFLPPL 376
D L HP F RD + R L +G PP
Sbjct: 443 CDGLRTHPLF---RDISWRQLEAGMLTPPF 469
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-MRLL----DHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + +++L H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETV--HRVVKHFNKLNQRM 169
+L + C F YL E+VP V + K F L
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKVAPEDLYKDFLTLE--- 185
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 186 ---HLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 240
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 292
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 293 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 347
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 85 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 134
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 135 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 193 ESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETV--HRVVKHFNKLNQRM 169
+L + C F YL E+VP V + K F L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKVAPEDLYKDFLTLE--- 148
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 149 ---HLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 203
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 255
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 310
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 84 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 133
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 134 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 192 ESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 132
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 133 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 191 ESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETV--HRVVKHFNKLNQRM 169
+L + C F YL E+VP V + K F +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLST---YLRSKRNEFVPYKVAPEDLYKDF------L 136
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ ++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 137 TLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 194
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 246
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 301
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 130
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 131 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 189 ESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 82 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 131
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 132 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 190 ESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
ER++G G FG V + G+ VAIK + K R E M DHPNVV
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ T K + +V+E++ + K + + +I + I + Y
Sbjct: 108 HLEGVV--TRGKPVM---IVIEFMENGA--LDAFLRKHDGQFTVIQLVGMLRGIAAGMRY 160
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+LVN + K+ DFG ++V ++ +P Y + + AP
Sbjct: 161 LA-DMGYVHRDLAARNILVNSNL-VCKVSDFGLSRV-IEDDPEAVYTTTGGKIPVRWTAP 217
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 218 EAI-QYRKFTSASDVWSYGIVMWEVM 242
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 77 RIVGQGSFGVVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 128
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALSY 187
L ++ +++ + L + E ++ F ++ + + + + LYAYQ+ AL+Y
Sbjct: 76 L----IGVITENPVWIIMELCTLGE-----LRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL--------VKGEPNISYICSRYY 239
+ S HRDI +N+LV+ + VKL DFG ++ + KG+ I ++
Sbjct: 127 LE-SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKASKGKLPIKWM----- 179
Query: 240 RAPELIFGATEYTTAIDIWSAG-CVVAELMLGKPLFPGDSGVDQLVEI 286
APE I +T+A D+W G C+ LM G F G D + I
Sbjct: 180 -APESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 128 SL---------------KHCFFSTTDKDELYLNLVL-EYVPETV--HRVVKHFNKLNQRM 169
+L + C F YL E+VP V + K F +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLST---YLRSKRNEFVPYKVAPEDLYKDF------L 136
Query: 170 PMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
+ ++ Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 137 TLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 194
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVE 285
+ +R + APE IF YT D+WS G ++ E+ LG +PG V+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 246
Query: 286 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
I + +E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 301
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+ + +P + V +H + + + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLITQLMPFGXLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 130
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 131 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 189 ESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 136
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 137 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 195 LESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K + +
Sbjct: 205 YSFQVAKGMEFLA-SRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 237 RY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGT 292
R + APE IF YT D+WS G ++ E+ LG +PG V+I +
Sbjct: 263 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 314
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
+E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 315 RLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 362
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K + +
Sbjct: 203 YSFQVAKGMEFLA-SRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 237 RY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGT 292
R + APE IF YT D+WS G ++ E+ LG +PG V+I +
Sbjct: 261 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 312
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
+E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 313 RLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 360
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 131
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 132 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 190 LESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K + +
Sbjct: 196 YSFQVAKGMEFLA-SRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 237 RY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGT 292
R + APE IF YT D+WS G ++ E+ LG +PG V+I +
Sbjct: 254 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 305
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
+E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 306 RLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 353
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
Y++Q+ + + ++ S HRD+ +N+L++ + VK+CDFG A+ + K + +
Sbjct: 198 YSFQVAKGMEFLA-SRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 237 RY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGT 292
R + APE IF YT D+WS G ++ E+ LG +PG V+I +
Sbjct: 256 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 307
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
+E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 308 RLKEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 355
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 127
E+++G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + ++ EY+ + K + R +I + I + Y
Sbjct: 94 HLEGVVTKCKP-----VMIITEYMEN--GSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 146
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ + HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 147 LS-DMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 203
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 204 EAI-AYRKFTSASDVWSYGIVMWEVM 228
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 79 VGQGSFGVVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-MRLL----DHPNVV 127
+G+G+FG V +A T TVA+K + + + ++R L + +++L H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 128 SLKHCFFSTTDKDELYLNLVLE---------YVPETVHRVVKHFNKLNQRMPMIYVKLYA 178
+L K L +++E Y+ + V + + + + ++ Y+
Sbjct: 95 NL----LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 179 YQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 238
+Q+ + + ++ S HRD+ +N+L++ + VK+ DFG A+ + K + +R
Sbjct: 151 FQVAKGMEFL-ASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 239 ---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGTPT 294
+ APE IF YT D+WS G ++ E+ LG +PG V+I +
Sbjct: 209 PLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFXRRL 260
Query: 295 REEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMP--PEAVDLVSRLLQ 339
+E + P+YT + Q WH P + P E V+ + LLQ
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWHGE-PSQRPTFSELVEHLGNLLQ 306
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 20 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 71
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L + V ++ + + H + + M + A Q R + Y+H +
Sbjct: 72 LFMGYSTKPQLAI--VTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLH-A 126
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF-- 246
+ HRD+K N+ ++ + VK+ DFG A V + + + S + APE+I
Sbjct: 127 KSIIHRDLKSNNIFLH-EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++E++
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 136
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 137 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 195 LESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 132
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 133 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 191 LESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 132
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 133 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 191 LESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 132
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 133 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 191 LESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 131
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 132 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 190 LESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 87 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 135
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 136 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 194 LESILHRI-YTHQSDVWSYGVTVWELM 219
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 91 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 139
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 140 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 198 LESILHRI-YTHQSDVWSYGVTVWELM 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
ER++G G FG V + G+ VAIK + K R E M DHPN++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 87 HLEGVVTKSKP-----VMIVTEYMENG--SLDTFLKKNDGQFTVIQLVGMLRGISAGMKY 139
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + AP
Sbjct: 140 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTAP 196
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E++
Sbjct: 197 EAI-AFRKFTSASDVWSYGIVMWEVV 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 106 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 154
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 155 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 213 LESILHRI-YTHQSDVWSYGVTVWELM 238
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVS-------- 128
+++G G+FG V++ + GE V I ++ R +LD V++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 129 --LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
L C ST + LV + +P ++ H + R+ + + QI + +S
Sbjct: 83 RLLGICLTST-------VQLVTQLMPYGC--LLDHVRENRGRLGSQDLLNWCMQIAKGMS 133
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 243
Y+ + + HRD+ +N+LV H VK+ DFG A++L E + + A E
Sbjct: 134 YLE-DVRLVHRDLAARNVLVKSPNH-VKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 244 LIFGATEYTTAIDIWSAGCVVAELM 268
I +T D+WS G V ELM
Sbjct: 192 SIL-RRRFTHQSDVWSYGVTVWELM 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG A+VL + +P +Y + +P
Sbjct: 163 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLARVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 123 HPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIF 182
HP++V + + T + +V+EYV + K Q++P+ Y +I
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEIL 192
Query: 183 RALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-----VKGEPNISYICSR 237
ALSY+H SIG+ + D+KP+N+++ Q+KL D G+ + + G P
Sbjct: 193 PALSYLH-SIGLVYNDLKPENIMLT--EEQLKLIDLGAVSRINSFGYLYGTPG------- 242
Query: 238 YYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGT 292
++APE++ T T A DI++ G +A L L P G VD L E VL T
Sbjct: 243 -FQAPEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRY-VDGLPEDDPVLKT 293
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 123
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 124 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 182 LESILHRI-YTHQSDVWSYGVTVWELM 207
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I + + R N+E+ M +D+P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 115 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 163
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 164 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 222 LESILHRI-YTHQSDVWSYGVTVWELM 247
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 83
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L + V ++ + + H + + M + A Q R + Y+H +
Sbjct: 84 LFMGYSTKPQLAI--VTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLH-A 138
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF-- 246
+ HRD+K N+ ++ + VK+ DFG A K G + S + APE+I
Sbjct: 139 KSIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++E++
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 127
E+++G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + ++ EY+ + K + R +I + I + Y
Sbjct: 73 HLEGVVTKCKP-----VMIITEYMENG--SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ + HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 126 LS-DMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 182
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 183 EAI-AYRKFTSASDVWSYGIVMWEVM 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 127
E+++G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + ++ EY+ + K + R +I + I + Y
Sbjct: 79 HLEGVVTKCKP-----VMIITEYMENG--SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ + HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 132 LS-DMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 188
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 189 EAI-AYRKFTSASDVWSYGIVMWEVM 213
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI
Sbjct: 78 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAEG 126
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 127 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 185 LESILHRI-YTHQSDVWSYGVTVWELM 210
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 130
+G+G FGVV++ T TVA+KK+ + K+ ++E++ M H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY---VKLYAYQIFRALSY 187
FS+ D L LV Y+P ++ + L+ P+ + K+ A +++
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKI-AQGAANGINF 148
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPEL 244
+H + + HRDIK N+L++ K+ DFG A+ K + + + Y APE
Sbjct: 149 LHENHHI-HRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA 206
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKP 272
+ G E T DI+S G V+ E++ G P
Sbjct: 207 LRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 130
+G+G FGVV++ T TVA+KK+ + K+ ++E++ M H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY---VKLYAYQIFRALSY 187
FS+ D L LV Y+P ++ + L+ P+ + K+ A +++
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKI-AQGAANGINF 148
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPEL 244
+H + + HRDIK N+L++ K+ DFG A+ K + + + Y APE
Sbjct: 149 LHENHHI-HRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA 206
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKP 272
+ G E T DI+S G V+ E++ G P
Sbjct: 207 LRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
+ +Q+ A+ + H + GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 162 FFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 219
Query: 237 RYYRAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGV 280
R Y PE I + + +WS G ++ +++ G F D +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 130
+G+G FGVV++ T TVA+KK+ + K+ ++E++ M H N+V L
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 89
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY---VKLYAYQIFRALSY 187
FS+ D L LV Y+P ++ + L+ P+ + K+ A +++
Sbjct: 90 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKI-AQGAANGINF 142
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPEL 244
+H + + HRDIK N+L++ K+ DFG A+ K + + + Y APE
Sbjct: 143 LHENHHI-HRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEA 200
Query: 245 IFGATEYTTAIDIWSAGCVVAELMLGKP 272
+ G E T DI+S G V+ E++ G P
Sbjct: 201 LRG--EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE--TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
L ++T + L+++ +P + V +H + + + Y+ + QI + +
Sbjct: 88 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 137
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 242
+Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 138 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 196 ESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LS-DMGFVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+ L
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 85
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ST + L +V ++ + + H + + M + A Q R + Y+H +
Sbjct: 86 MGYSTAPQ----LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLH-A 138
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF-- 246
+ HRD+K N+ ++ + VK+ DFG A K G + S + APE+I
Sbjct: 139 KSIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++E++
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 98 RLEGVVTKSKP-----VMIVTEYMEN--GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 151 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 207
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 208 EAI-AYRKFTSASDVWSYGIVLWEVM 232
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG +VL + +P +Y + +P
Sbjct: 163 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLGRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 108 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 161 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 217
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 218 EAI-AYRKFTSASDVWSYGIVLWEVM 242
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ + + +V EY+ + K + + +I + I + Y
Sbjct: 81 RLEGVVTKSKP-----VMIVTEYMEN--GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 134 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 190
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 191 EAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 136
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 137 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 195 LESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ T K + + +E + K + + +I + I + Y
Sbjct: 110 RLEGVV--TKSKPVMIVTEXMEN-----GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LS-DMGAVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 118/290 (40%), Gaps = 44/290 (15%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKNRELQ-------TMRLLDHPNVVSLK 130
+G+GSF V+ K L+T TV + LQD++ E Q ++ L HPN+V
Sbjct: 34 IGRGSFKTVY--KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 131 HCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH- 189
+ ST + + + T+ +K F ++ ++ + QI + L ++H
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV----LRSWCRQILKGLQFLHT 147
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 249
R+ + HRD+K N+ + T VK+ D G A L + + I + + APE
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXY--EE 204
Query: 250 EYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 309
+Y ++D+++ G E + + +C N
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYS-----------------------ECQNAAQI--- 238
Query: 310 FPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDE 359
+ ++ + F K PE +++ ++ + + R + D L H FF E
Sbjct: 239 YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 127
+++ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 SLKH-CFFSTTD--KDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
L C ST + +L+YV E H + + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 185 LSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRA 241
++Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
E I YT D+WS G V ELM
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 71 ISYMA-ERIVGQGSFGVVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLL 121
+SY+ E ++G G FG V + + G+ VAIK + + R E M
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 122 DHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQ 180
+HPN++ L+ + + + ++ E++ + + F +LN + +I +
Sbjct: 73 EHPNIIRLEGVV-----TNSMPVMILTEFME---NGALDSFLRLNDGQFTVIQLVGMLRG 124
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR--- 237
I + Y+ + HRD+ +N+LVN + K+ DFG ++ L + + +Y S
Sbjct: 125 IASGMRYLAE-MSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 238 ---YYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
+ APE I ++T+A D WS G V+ E+M
Sbjct: 183 IPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 96 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 150
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 151 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 132/348 (37%), Gaps = 56/348 (16%)
Query: 78 IVGQG--SFGVVFQAKCLETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNVVSL 129
++G+G V A+ TGE V ++++ + + EL +L +HPN+V
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+ F + +EL++ + HF + + Y+ + +AL YIH
Sbjct: 76 RATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 129
Query: 190 RSIGVCHRDIKPQNLLVNPHT--------HQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
+G HR +K ++L++ + + G + +V P S +
Sbjct: 130 H-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 188
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII-------------- 287
L Y DI+S G EL G F L+E +
Sbjct: 189 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 248
Query: 288 --KVLGTPTR--------EEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL 337
++ +P+R + + P + P +HP+H+ F P V +
Sbjct: 249 AEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTF----SPHFHHFVEQC 301
Query: 338 LQYSPNLRCTALDALIHPFFDEL-RDPNARLPS-GRFLPPLFNFKSHE 383
LQ +P+ R +A L H FF ++ R + LP R + P+ NF+ +
Sbjct: 302 LQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQ 349
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ T K + + +E + K + + +I + I + Y
Sbjct: 110 RLEGVV--TKSKPVMIVTEXMEN-----GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 43 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 94
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 95 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 149
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 150 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 76 ERIVGQGSFGVVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
+++VG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSY 187
L+ T K + + +E + K + + +I + I + Y
Sbjct: 81 RLEGVV--TKSKPVMIVTEXMEN-----GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 188 IHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 242
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 134 LS-DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 190
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM 268
E I ++T+A D+WS G V+ E+M
Sbjct: 191 EAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 59/308 (19%)
Query: 74 MAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 132
+ +++G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFR----ALSYI 188
+ + + L +V+E + + F+++ R + + A +I + A+ Y+
Sbjct: 80 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 246
H SI + HRD+KP+NLL +KL DFG AK GE
Sbjct: 134 H-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTGE------------------ 173
Query: 247 GATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYT 306
+Y + D+WS G ++ L+ G P F + G + G TR +
Sbjct: 174 ---KYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 217
Query: 307 EFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPF-FDELRDPNA 365
+++FP + W ++ E L+ LL+ P R T + + HP+ + P
Sbjct: 218 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 269
Query: 366 RLPSGRFL 373
L + R L
Sbjct: 270 PLHTSRVL 277
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNVVSLKHCF 133
+G GSFG V++ K V I KV+ Q + ++N E+ +R H N++ F
Sbjct: 44 IGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQAFRN-EVAVLRKTRHVNIL----LF 97
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
KD L +V ++ + + KH + + M + A Q + + Y+H +
Sbjct: 98 MGYMTKDNL--AIVTQWCEGS--SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH-AKN 152
Query: 194 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK--GEPNISY-ICSRYYRAPELIFGATE 250
+ HRD+K N+ ++ VK+ DFG A V + G + S + APE+I
Sbjct: 153 IIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 251 --YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
++ D++S G V+ ELM G+ + + DQ++ ++
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 18 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 69
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 70 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 124
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 125 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 73 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 127
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 128 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 68 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 122
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 132/348 (37%), Gaps = 56/348 (16%)
Query: 78 IVGQG--SFGVVFQAKCLETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNVVSL 129
++G+G V A+ TGE V ++++ + + EL +L +HPN+V
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 130 KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIH 189
+ F + +EL++ + HF + + Y+ + +AL YIH
Sbjct: 92 RATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 145
Query: 190 RSIGVCHRDIKPQNLLVNPHT--------HQVKLCDFGSAKVLVKGEPNISYICSRYYRA 241
+G HR +K ++L++ + + G + +V P S +
Sbjct: 146 H-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 204
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII-------------- 287
L Y DI+S G EL G F L+E +
Sbjct: 205 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 264
Query: 288 --KVLGTPTR--------EEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRL 337
++ +P+R + + P + P +HP+H+ F P V +
Sbjct: 265 AEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTF----SPHFHHFVEQC 317
Query: 338 LQYSPNLRCTALDALIHPFFDEL-RDPNARLPS-GRFLPPLFNFKSHE 383
LQ +P+ R +A L H FF ++ R + LP R + P+ NF+ +
Sbjct: 318 LQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQ 365
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 73 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 127
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 128 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGET-----VAIKKVLQDKRYKNRE-----LQ 116
P++ + + +++G G+FG V A +T VA+K + + RE L+
Sbjct: 43 PRENLEF--GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 117 TM-RLLDHPNVVSL--------------KHCFFSTT-----DKDELYLNLVLEYVPETVH 156
M +L H N+V+L ++C + K E + +EY +
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 157 RVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLC 216
+ N L + + AYQ+ + + ++ V HRD+ +N+LV H VK+C
Sbjct: 161 EEEEDLNVLTFEDLLCF----AYQVAKGMEFLEFKSCV-HRDLAARNVLVT-HGKVVKIC 214
Query: 217 DFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKP 272
DFG A+ ++ + +R + APE +F YT D+WS G ++ E+ LG
Sbjct: 215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVN 273
Query: 273 LFPG 276
+PG
Sbjct: 274 PYPG 277
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 80 GQGSFGVVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLKH 131
G+G FGVV++ T TVA+KK+ + K+ ++E++ H N+V L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL-- 86
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY---VKLYAYQIFRALSYI 188
FS+ D L LV Y P ++ + L+ P+ + K+ A ++++
Sbjct: 87 LGFSSDGDD---LCLVYVYXPNG--SLLDRLSCLDGTPPLSWHXRCKI-AQGAANGINFL 140
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELI 245
H + + HRDIK N+L++ K+ DFG A+ K + + + Y APE +
Sbjct: 141 HENHHI-HRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKP 272
G E T DI+S G V+ E++ G P
Sbjct: 199 RG--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 96 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 150
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A K G + S + APE+I
Sbjct: 151 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 36 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 87
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 88 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 142
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A K G + S + APE+I
Sbjct: 143 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 66 QPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL----QTMRLL 121
+P+ + R +G GSFG ++ ++T E VAIK L++ + K+ +L + R+L
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LENVKTKHPQLLYESKIYRIL 59
Query: 122 DHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
+ F D + L ++L+ + + FN ++++ + V + A Q+
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDL-------FNFCSRKLSLKTVLMLADQM 112
Query: 182 FRALSYIHRSIGVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 222
+ ++H S HRDIKP N L + +QV + DFG AK
Sbjct: 113 INRVEFVH-SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+ L
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 69
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
+ST + L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 70 MGYSTAPQ----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 122
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 26/221 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 131
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 132 CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRS 191
F + K +L +V ++ + + H + + + MI + A Q + + Y+H +
Sbjct: 68 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 122
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGA 248
+ HRD+K N+ ++ VK+ DFG A K G + S + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 249 TE--YTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEII 287
+ Y+ D+++ G V+ ELM G+ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 40/222 (18%)
Query: 76 ERIVGQGSFGVVFQAKCLETGETVAIKK-VLQDKRYK----------NRELQTMRLLDHP 124
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIY-VKL-YAYQ 180
N+V L + +V+E+VP + HR+ L++ P+ + VKL
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRL------LDKAHPIKWSVKLRLMLD 130
Query: 181 IFRALSYI-HRSIGVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYIC 235
I + Y+ +++ + HRD++ N+ + +C DFG+++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH---SVSGLL 187
Query: 236 SRY-YRAPELIFGATE--YTTAIDIWSAGCVVAELMLGKPLF 274
+ + APE I GA E YT D +S ++ ++ G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 76 ERIVGQGSFGVVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
E+I+G G G V + G+ VAIK + + R E M DHPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
L+ + L + +V EY+ ++ ++ + M ++ + R LS
Sbjct: 114 RLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRA 241
+G HRD+ +N+LV+ + K+ DFG ++VL + +P+ +Y + + A
Sbjct: 169 ----DLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAYTTTGGKIPIRWTA 222
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
PE I T +++A D+WS G V+ E++
Sbjct: 223 PEAIAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 76 ERIVGQGSFGVVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
E+++G G FG V G+ VAIK + K R E M DHPNV+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALS 186
L+ +T + ++ E++ + + F + N + +I + I +
Sbjct: 98 HLEGVVTKSTP-----VMIITEFME---NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------YYR 240
Y+ + HRD+ +N+LVN + K+ DFG ++ L + +Y + +
Sbjct: 150 YLA-DMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 241 APELIFGATEYTTAIDIWSAGCVVAELM 268
APE I ++T+A D+WS G V+ E+M
Sbjct: 208 APEAI-QYRKFTSASDVWSYGIVMWEVM 234
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 229
++YQ+ + ++++ S HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 166 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
+ + APE IF YT D+WS G + EL LG +PG + ++IK
Sbjct: 224 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 229
++YQ+ + ++++ S HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 173 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
+ + APE IF YT D+WS G + EL LG +PG + ++IK
Sbjct: 231 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 229
++YQ+ + ++++ S HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 168 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
+ + APE IF YT D+WS G + EL LG +PG + ++IK
Sbjct: 226 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 229
++YQ+ + ++++ S HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 173 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
+ + APE IF YT D+WS G + EL LG +PG + ++IK
Sbjct: 231 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 229
++YQ+ + ++++ S HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 150 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 230 NISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
+ + APE IF YT D+WS G + EL LG +PG + ++IK
Sbjct: 208 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 71 ISYMA-ERIVGQGSFGVVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLL 121
+SY+ E ++G G FG V + + G+ VAIK + + R E M
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 122 DHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQ 180
+HPN++ L+ + + + ++ E++ + + F +LN + +I +
Sbjct: 75 EHPNIIRLEGVV-----TNSMPVMILTEFME---NGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR--- 237
I + Y+ + HRD+ +N+LVN + K+ DFG ++ L + + + S
Sbjct: 127 IASGMRYLAE-MSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGK 184
Query: 238 ---YYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
+ APE I ++T+A D WS G V+ E+M
Sbjct: 185 IPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 217
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 32/262 (12%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN-RELQTMRLLDHPNVVSLKHCFFST 136
++G+G +G V++ E V + + + N + + + L++H N+
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERV 79
Query: 137 TDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI---- 192
T + LV+EY P + + + L+ + +L A+ + R L+Y+H +
Sbjct: 80 TADGRMEYLLVMEYYP---NGSLXKYLSLHTSDWVSSCRL-AHSVTRGLAYLHTELPRGD 135
Query: 193 ----GVCHRDIKPQNLLVNPHTHQVKLCDFG-----SAKVLVK-GEPN---ISYICSRYY 239
+ HRD+ +N+LV V + DFG + LV+ GE + IS + + Y
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCV-ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 240 RAPELIFGATEYTTA------IDIWSAGCVVAEL-MLGKPLFPGDSGVD-QLVEIIKVLG 291
APE++ GA +D+++ G + E+ M LFPG+S + Q+ +V
Sbjct: 195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGN 254
Query: 292 TPTREEIKCMNPNYTEF-KFPQ 312
PT E+++ + + KFP+
Sbjct: 255 HPTFEDMQVLVSREKQRPKFPE 276
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 40/222 (18%)
Query: 76 ERIVGQGSFGVVFQAKCLETGETVAIKK-VLQDKRYK----------NRELQTMRLLDHP 124
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIY-VKL-YAYQ 180
N+V L + +V+E+VP + HR+ L++ P+ + VKL
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRL------LDKAHPIKWSVKLRLMLD 130
Query: 181 IFRALSYI-HRSIGVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYIC 235
I + Y+ +++ + HRD++ N+ + +C DFG ++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH---SVSGLL 187
Query: 236 SRY-YRAPELIFGATE--YTTAIDIWSAGCVVAELMLGKPLF 274
+ + APE I GA E YT D +S ++ ++ G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 52/239 (21%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKC-----LETGETVAIKKVLQDKRYK-----NRELQ 116
P+ I Y+ R +G+G+FG VFQA+ E VA+K + ++ RE
Sbjct: 45 PRNNIEYV--RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 117 TMRLLDHPNVVSL--------KHC----FFSTTDKDELYLNLVLEYVPETVHRVVKHFNK 164
M D+PN+V L C + + D +E ++ V H + +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 165 LNQRMP----MIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGS 220
++ P A Q+ ++Y+ V HRD+ +N LV VK+ DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV-HRDLATRNCLVG-ENMVVKIADFGL 220
Query: 221 AKVLVKGEPNISYICSRYYRA------------PELIFGATEYTTAIDIWSAGCVVAEL 267
++ + + YY+A PE IF YTT D+W+ G V+ E+
Sbjct: 221 SRNIYSAD---------YYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEI 269
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 76 ERIVGQGSFGVVFQAKCLETGET-----VAIKKVLQDKRYKNR-----ELQTMRLLDHPN 125
++++G G FG V++ L+T VAIK + K R E M H N
Sbjct: 49 QKVIGAGEFGEVYKG-MLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRAL 185
++ L+ + ++ EY+ + K + + ++ + I +
Sbjct: 108 IIRLEGVISKYKP-----MMIITEYMENGA--LDKFLREKDGEFSVLQLVGMLRGIAAGM 160
Query: 186 SYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYR 240
Y+ ++ HRD+ +N+LVN + K+ DFG ++VL + +P +Y S +
Sbjct: 161 KYLA-NMNYVHRDLAARNILVNSNL-VCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWT 217
Query: 241 APELIFGATEYTTAIDIWSAGCVVAELM 268
APE I ++T+A D+WS G V+ E+M
Sbjct: 218 APEAI-SYRKFTSASDVWSFGIVMWEVM 244
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL-Y 177
+ HPNV+SL + E +VL Y+ H +++F + P + + +
Sbjct: 85 KDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIGF 137
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E + +
Sbjct: 138 GLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVHNKTG 195
Query: 238 Y-----YRAPELIFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEIIKVLG 291
+ A E + ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 196 AKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 250
Query: 292 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 251 ----QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 290
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 45 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 103
Query: 119 RLLDHPNVVSLKH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL- 176
+ HPNV+SL C S L +P H +++F + P + +
Sbjct: 104 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 155
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
+ Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E Y
Sbjct: 156 FGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 209
Query: 237 RYYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+L ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 210 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 269
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 270 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 309
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 46 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 104
Query: 119 RLLDHPNVVSLKH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL- 176
+ HPNV+SL C S L +P H +++F + P + +
Sbjct: 105 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 156
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
+ Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E Y
Sbjct: 157 FGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 210
Query: 237 RYYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+L ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 211 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 270
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 271 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 310
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 35/258 (13%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSLKHCFFS 135
+G G FGVV K + VA+K + + ++ +E QTM L HP +V F+
Sbjct: 16 LGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVK----FYG 70
Query: 136 TTDKDELYLNLVLEYVPE--TVHRVVKHFNKL--NQRMPMIYVKLYAYQIFRALSYIHRS 191
K E + +V EY+ ++ + H L +Q + M Y + ++++ S
Sbjct: 71 VCSK-EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM------CYDVCEGMAFL-ES 122
Query: 192 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGA 248
HRD+ +N LV+ VK+ DFG + ++ + +S + +++ + APE +F
Sbjct: 123 HQFIHRDLAARNCLVDRDL-CVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPE-VFHY 179
Query: 249 TEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTE 307
+Y++ D+W+ G ++ E+ LGK P D + V ++KV + + P+
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGK--MPYDLYTNSEV-VLKV-----SQGHRLYRPHLAS 231
Query: 308 FKFPQIKAHPWHKIFPKR 325
QI WH++ KR
Sbjct: 232 DTIYQIMYSCWHELPEKR 249
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 119 RLLDHPNVVSLKH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL- 176
+ HPNV+SL C S L +P H +++F + P + +
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
+ Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E Y
Sbjct: 138 FGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 191
Query: 237 RYYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+L ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 252 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 54/295 (18%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------------E 114
P I + E ++G+G FG V+ L+ KK+ + NR E
Sbjct: 24 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 78
Query: 115 LQTMRLLDHPNVVSLKH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY 173
M+ HPNV+SL C S L +P H +++F + P +
Sbjct: 79 GIIMKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVK 130
Query: 174 VKL-YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
+ + Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 131 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 184
Query: 233 YICSRYYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQL 283
Y +L ++TT D+WS G ++ ELM G P +P + D
Sbjct: 185 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 244
Query: 284 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
V ++ + + + P Y ++ WH PK M P +LVSR+
Sbjct: 245 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 288
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 76 ERIVGQGSFGVVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
E+I+G G G V + G+ VAIK + + R E M DHPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALS 186
L+ + L + +V EY+ ++ ++ + M ++ + R LS
Sbjct: 114 RLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRA 241
+G HRD+ +N+LV+ + K+ DFG ++VL + +P+ + + + A
Sbjct: 169 ----DLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAXTTTGGKIPIRWTA 222
Query: 242 PELIFGATEYTTAIDIWSAGCVVAELM 268
PE I T +++A D+WS G V+ E++
Sbjct: 223 PEAIAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 38/287 (13%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL-Y 177
+ HPNV+SL + E +VL Y+ H +++F + P + + +
Sbjct: 87 KDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIGF 139
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Q+ + + ++ S HRD+ +N +++ VK+ DFG A+ ++ E + + +
Sbjct: 140 GLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMLDKEFDSVHNKTG 197
Query: 238 Y-----YRAPELIFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEIIKVLG 291
+ A E + ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 198 AKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 252
Query: 292 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 253 ----QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 292
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 44/290 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL-Y 177
+ HPNV+SL + E +VL Y+ H +++F + P + + +
Sbjct: 84 KDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIGF 136
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E Y
Sbjct: 137 GLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVH 190
Query: 238 YYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEIIK 288
+L ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL- 249
Query: 289 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 250 -------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 289
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 43/235 (18%)
Query: 77 RIVGQGSFGVVFQAKCL----ETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNV 126
+ +G+G FG V +A G T K+L++ R E ++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLN------------------- 166
+ L + +D L L++EY ++ ++ K+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 167 -QRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV 225
+ + M + +A+QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLA-EMSLVHRDLAARNILV-AEGRKMKISDFGLSRDVY 201
Query: 226 KGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
+ + + R + A E +F YTT D+WS G ++ E++ LG +PG
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 44/290 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 22 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 80
Query: 119 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL-Y 177
+ HPNV+SL + E +VL Y+ H +++F + P + + +
Sbjct: 81 KDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIGF 133
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E Y
Sbjct: 134 GLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVH 187
Query: 238 YYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEIIK 288
+L ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL- 246
Query: 289 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 247 -------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 286
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 19 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 77
Query: 119 RLLDHPNVVSLKH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL- 176
+ HPNV+SL C S L +P H +++F + P + +
Sbjct: 78 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 129
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
+ Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E Y
Sbjct: 130 FGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 183
Query: 237 RYYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+L ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 184 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 243
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 244 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 283
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 54/295 (18%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------------E 114
P I + E ++G+G FG V+ L+ KK+ + NR E
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 80
Query: 115 LQTMRLLDHPNVVSLKH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY 173
M+ HPNV+SL C S L +P H +++F + P +
Sbjct: 81 GIIMKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVK 132
Query: 174 VKL-YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 232
+ + Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 133 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 186
Query: 233 YICSRYYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQL 283
Y +L ++TT D+WS G ++ ELM G P +P + D
Sbjct: 187 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 246
Query: 284 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
V ++ + + + P Y ++ WH PK M P +LVSR+
Sbjct: 247 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 118
P I + E ++G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 119 RLLDHPNVVSLKH-CFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKL- 176
+ HPNV+SL C S L +P H +++F + P + +
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
+ Q+ + + Y+ S HRD+ +N +++ VK+ DFG A+ + E Y
Sbjct: 138 FGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 191
Query: 237 RYYRAPEL--------IFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+L ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 252 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 291
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 40/222 (18%)
Query: 76 ERIVGQGSFGVVFQAKCLETGETVAIKK-VLQDKRYK----------NRELQTMRLLDHP 124
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVP--ETVHRVVKHFNKLNQRMPMIY-VKL-YAYQ 180
N+V L + +V+E+VP + HR+ L++ P+ + VKL
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRL------LDKAHPIKWSVKLRLMLD 130
Query: 181 IFRALSYI-HRSIGVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYIC 235
I + Y+ +++ + HRD++ N+ + +C DF ++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH---SVSGLL 187
Query: 236 SRY-YRAPELIFGATE--YTTAIDIWSAGCVVAELMLGKPLF 274
+ + APE I GA E YT D +S ++ ++ G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------------E 114
P I + E ++G+G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 115 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYV 174
M+ HPNV+SL + E +VL Y+ H +++F + P +
Sbjct: 82 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 134
Query: 175 KL-YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ + Q+ + + ++ S HRD+ +N +++ VK+ DFG A+ + E + +
Sbjct: 135 LIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVH 192
Query: 234 ICSRY-----YRAPELIFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+ + A E + ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 193 NKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 252 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------------E 114
P I + E ++G+G FG V+ L+ KK+ + NR E
Sbjct: 32 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 86
Query: 115 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYV 174
M+ HPNV+SL + E +VL Y+ H +++F + P +
Sbjct: 87 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 139
Query: 175 KL-YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ + Q+ + + ++ S HRD+ +N +++ VK+ DFG A+ + E + +
Sbjct: 140 LIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVH 197
Query: 234 ICSRY-----YRAPELIFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+ + A E + ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 198 NKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 256
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 257 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 296
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 43/235 (18%)
Query: 77 RIVGQGSFGVVFQAKCL----ETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNV 126
+ +G+G FG V +A G T K+L++ R E ++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLN------------------- 166
+ L + +D L L++EY ++ ++ K+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 167 -QRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV 225
+ + M + +A+QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLA-EMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVY 201
Query: 226 KGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
+ + + R + A E +F YTT D+WS G ++ E++ LG +PG
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 76 ERIVGQGSFGVVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 127
E+++G G FG V G+ VAIK + K R E M DHPNV+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQIFRALS 186
L+ +T + ++ E++ + + F + N + +I + I +
Sbjct: 72 HLEGVVTKSTP-----VMIITEFME---NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 187 YIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------YYR 240
Y+ + HR + +N+LVN + K+ DFG ++ L + +Y + +
Sbjct: 124 YLA-DMNYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 241 APELIFGATEYTTAIDIWSAGCVVAELM 268
APE I ++T+A D+WS G V+ E+M
Sbjct: 182 APEAI-QYRKFTSASDVWSYGIVMWEVM 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------------E 114
P I + E ++G+G FG V+ L+ KK+ + NR E
Sbjct: 86 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 140
Query: 115 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYV 174
M+ HPNV+SL + E +VL Y+ H +++F + P +
Sbjct: 141 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 193
Query: 175 KL-YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ + Q+ + + ++ S HRD+ +N +++ VK+ DFG A+ + E + +
Sbjct: 194 LIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVH 251
Query: 234 ICSRY-----YRAPELIFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+ + A E + ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 252 NKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 310
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 311 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 350
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------------E 114
P I + E ++G+G FG V+ L+ KK+ + NR E
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 82
Query: 115 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYV 174
M+ HPNV+SL + E +VL Y+ H +++F + P +
Sbjct: 83 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 135
Query: 175 KL-YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ + Q+ + + ++ S HRD+ +N +++ VK+ DFG A+ + E + +
Sbjct: 136 LIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVH 193
Query: 234 ICSRY-----YRAPELIFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+ + A E + ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 194 NKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 252
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 253 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------------E 114
P I + E ++G+G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 115 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYV 174
M+ HPNV+SL + E +VL Y+ H +++F + P +
Sbjct: 82 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 134
Query: 175 KL-YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ + Q+ + + ++ S HRD+ +N +++ VK+ DFG A+ + E + +
Sbjct: 135 LIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVH 192
Query: 234 ICSRY-----YRAPELIFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+ + A E + ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 193 NKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 252 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 46/291 (15%)
Query: 67 PKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR------------E 114
P I + E ++G+G FG V+ L+ KK+ + NR E
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 79
Query: 115 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYV 174
M+ HPNV+SL + E +VL Y+ H +++F + P +
Sbjct: 80 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 132
Query: 175 KL-YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ + Q+ + + ++ S HRD+ +N +++ VK+ DFG A+ + E + +
Sbjct: 133 LIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVH 190
Query: 234 ICSRY-----YRAPELIFGATEYTTAIDIWSAGCVVAELML-GKPLFPGDSGVDQLVEII 287
+ + A E + ++TT D+WS G ++ ELM G P +P + D V ++
Sbjct: 191 NKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 249
Query: 288 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPK-RMPPEAVDLVSRL 337
+ + + P Y ++ WH PK M P +LVSR+
Sbjct: 250 --------QGRRLLQPEYCPDPLYEVMLKCWH---PKAEMRPSFSELVSRI 289
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 43/235 (18%)
Query: 77 RIVGQGSFGVVFQAKCL----ETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNV 126
+ +G+G FG V +A G T K+L++ R E ++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYVP-ETVHRVVKHFNKLN------------------- 166
+ L + +D L L++EY ++ ++ K+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 167 -QRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV 225
+ + M + +A+QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLA-EMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVY 201
Query: 226 KGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
+ + + R + A E +F YTT D+WS G ++ E++ LG +PG
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 76 ERIVGQGSFGVVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 127
+ ++G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 128 SL-KHCFFSTTDKDELYLNLVLEYVPE-------TVHRVVKH------FNKLNQRMPMIY 173
+L C + YL L +EY P RV++ N +
Sbjct: 80 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPN 230
+ +A + R + Y+ + + HRD+ +N+LV + + K+ DFG ++ V VK
Sbjct: 134 LLHFAADVARGMDYLSQKQFI-HRDLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KT 189
Query: 231 ISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
+ + R+ L + YTT D+WS G ++ E++
Sbjct: 190 MGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 76 ERIVGQGSFGVVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 127
+ ++G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 128 SL-KHCFFSTTDKDELYLNLVLEYVPE-------TVHRVVKH------FNKLNQRMPMIY 173
+L C + YL L +EY P RV++ N +
Sbjct: 90 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPN 230
+ +A + R + Y+ + + HRD+ +N+LV + + K+ DFG ++ V VK
Sbjct: 144 LLHFAADVARGMDYLSQKQFI-HRDLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KT 199
Query: 231 ISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
+ + R+ L + YTT D+WS G ++ E++
Sbjct: 200 MGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 235
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 40/229 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 125
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 126 VVSL--------------KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+V+L ++C + + VLE P F N +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA--------FAIANSTLST 163
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ ++ Q+ + ++++ S HRD+ +N+L+ + H K+ DFG A+ ++ I
Sbjct: 164 RDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 221
Query: 232 SYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
+R + APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 222 VKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKV-LQDKRYKNRELQTMRL--LDHPNVVSLKHCFF 134
+ +G FG V++A+ L E VA+K +QDK+ E + L + H N++
Sbjct: 31 VKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 135 STTDKD-ELYLNLVLE---YVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHR 190
T D +L+L + + + V +N+L A + R L+Y+H
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCH---------IAETMARGLAYLHE 139
Query: 191 SI---------GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP---NISYICSRY 238
I + HRDIK +N+L+ + + DFG A G+ + +R
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQVGTRR 198
Query: 239 YRAPELIFGATEYTT----AIDIWSAGCVVAEL 267
Y APE++ GA + ID+++ G V+ EL
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 38/229 (16%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTM-RLLDHPN 125
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 126 VVSL--------------KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+V+L ++C + LN + P + + +++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDL------LNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ ++ Q+ + ++++ S HRD+ +N+L+ + H K+ DFG A+ ++ I
Sbjct: 166 RDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 223
Query: 232 SYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
+R + APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 224 VKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 79 VGQGSFGVVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 128
+G GSFGVV + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L + + +V E P + ++ K + + YA Q+ + Y+
Sbjct: 86 LYGVVLTPP------MKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------AP 242
S HRD+ +NLL+ VK+ DFG + L + + + Y+ + + AP
Sbjct: 138 E-SKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWCAP 193
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
E + T ++ A D W G + E+ G+ + G +G L +I K
Sbjct: 194 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 195 CHRDIKPQNLLVNPHTHQVKLCDFG--SAKVLVKGEPNISYICSRYYRAPELIFGATEYT 252
HRD+KP+N+LV+ L DFG SA K + + + YY APE F + T
Sbjct: 156 THRDVKPENILVSADDF-AYLVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESHAT 213
Query: 253 TAIDIWSAGCVVAELMLGKPLFPGD 277
DI++ CV+ E + G P + GD
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGD 238
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQ------TMRLLDHPN 125
++ + I+G+G FG V++ + L G VA+K+ L+++R + ELQ + + H N
Sbjct: 31 NFXNKNILGRGGFGKVYKGR-LADGXLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY--AYQIFR 183
++ L+ + T++ +Y + V + + + P+ + K A R
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPESQPPLDWPKRQRIALGSAR 142
Query: 184 ALSYIHRSIG--VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY--Y 239
L+Y+H + HRD+K N+L++ V + DFG AK++ + ++ +
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGH 201
Query: 240 RAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLF 274
APE + + + D++ G ++ EL+ G+ F
Sbjct: 202 IAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 132
Y R +G GSFG ++ + +GE VAIK ++ +++ V +
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPSI 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ + D Y +V+E + ++ + FN +++ + V L A Q+ + YIH S
Sbjct: 71 KWCGAEGD--YNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIH-SK 124
Query: 193 GVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 222
HRD+KP N L + + V + DFG AK
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 72 SYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQ------TMRLLDHPN 125
++ + I+G+G FG V++ + L G VA+K+ L+++R + ELQ + + H N
Sbjct: 39 NFSNKNILGRGGFGKVYKGR-LADGTLVAVKR-LKEERXQGGELQFQTEVEMISMAVHRN 96
Query: 126 VVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLY--AYQIFR 183
++ L+ + T++ +Y + V + + + P+ + K A R
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPESQPPLDWPKRQRIALGSAR 150
Query: 184 ALSYIHRSIG--VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY--Y 239
L+Y+H + HRD+K N+L++ V + DFG AK++ + ++ +
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGH 209
Query: 240 RAPELIFGATEYTTAIDIWSAGCVVAELMLGKPLF 274
APE + + + D++ G ++ EL+ G+ F
Sbjct: 210 IAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 79 VGQGSFGVVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 128
+G GSFGVV + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L + + +V E P + ++ K + + YA Q+ + Y+
Sbjct: 76 LYGVVLTPP------MKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------AP 242
S HRD+ +NLL+ VK+ DFG + L + + + Y+ + + AP
Sbjct: 128 E-SKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWCAP 183
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
E + T ++ A D W G + E+ G+ + G +G L +I K
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 79 VGQGSFGVVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 128
+G GSFGVV + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L + + +V E P + ++ K + + YA Q+ + Y+
Sbjct: 80 LYGVVLTPP------MKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------AP 242
S HRD+ +NLL+ VK+ DFG + L + + + Y+ + + AP
Sbjct: 132 E-SKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWCAP 187
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
E + T ++ A D W G + E+ G+ + G +G L +I K
Sbjct: 188 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 79 VGQGSFGVVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 128
+G GSFGVV + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L + + +V E P + ++ K + + YA Q+ + Y+
Sbjct: 76 LYGVVLTPP------MKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------AP 242
S HRD+ +NLL+ VK+ DFG + L + + + Y+ + + AP
Sbjct: 128 E-SKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWCAP 183
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
E + T ++ A D W G + E+ G+ + G +G L +I K
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 40/229 (17%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 125
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 126 VVSL--------------KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+V+L ++C + + VLE P F N
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA--------FAIANSTAST 163
Query: 172 IYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 231
+ ++ Q+ + ++++ S HRD+ +N+L+ + H K+ DFG A+ ++ I
Sbjct: 164 RDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 221
Query: 232 SYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
+R + APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 222 VKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 79 VGQGSFGVVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 128
+G GSFGVV + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L + + +V E P + ++ K + + YA Q+ + Y+
Sbjct: 80 LYGVVLTPP------MKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------AP 242
S HRD+ +NLL+ VK+ DFG + L + + + Y+ + + AP
Sbjct: 132 E-SKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWCAP 187
Query: 243 ELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
E + T ++ A D W G + E+ G+ + G +G L +I K
Sbjct: 188 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 25/203 (12%)
Query: 79 VGQGSFGVVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 128
+G GSFGVV + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L + + +V E P + ++ K + + YA Q+ + Y+
Sbjct: 86 LYGVVLTPP------MKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRAPEL 244
S HRD+ +NLL+ VK+ DFG + L + + + R + APE
Sbjct: 138 E-SKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 245 IFGATEYTTAIDIWSAGCVVAEL 267
+ T ++ A D W G + E+
Sbjct: 196 LKTRT-FSHASDTWMFGVTLWEM 217
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 79 VGQGSFGVVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 128
+G GSFGVV + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 129 LKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYI 188
L + + +V E P + ++ K + + YA Q+ + Y+
Sbjct: 76 LYGVVLTPP------MKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 189 HRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRAPEL 244
S HRD+ +NLL+ VK+ DFG + L + + + R + APE
Sbjct: 128 E-SKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 245 IFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIK 288
+ T ++ A D W G + E+ G+ + G +G L +I K
Sbjct: 186 LKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 136/355 (38%), Gaps = 109/355 (30%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNREL---------QTMRLLDHPNVVSL 129
+G+G FGVVF+AK AIK++ R NREL + + L+HP +V
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 69
Query: 130 KHCFFST------TDKDELYL-NLVLEY---------VPETVHRVVKHF---NKLNQRMP 170
+ + T + DE++L + ++ P R + F N + Q P
Sbjct: 70 FNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129
Query: 171 -----MIYVKLYAYQ-------IFRALSYIHRSIGVC--------------------HRD 198
+Y+++ + + R S R GVC HRD
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRD 189
Query: 199 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-------PNISY------ICSRYYRAPELI 245
+KP N+ VK+ DFG + + E P +Y + ++ Y +PE I
Sbjct: 190 LKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQI 248
Query: 246 FGATEYTTAIDIWSAGCVVAELMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNY 305
G Y+ +DI+S G ++ EL+ +E ++++ +
Sbjct: 249 HG-NNYSHKVDIFSLGLILFELLY---------SFSTQMERVRIIT------------DV 286
Query: 306 TEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDEL 360
KFP +F ++ P E + +V +L SP R A D + + F+ L
Sbjct: 287 RNLKFPL--------LFTQKYPQEHM-MVQDMLSPSPTERPEATDIIENAIFENL 332
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 76 ERIVGQGSFGVVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 127
+ ++G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 128 SL-KHCFFSTTDKDELYLNLVLEYVPE-------TVHRVVKH------FNKLNQRMPMIY 173
+L C + YL L +EY P RV++ N +
Sbjct: 87 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPN 230
+ +A + R + Y+ + + HR++ +N+LV + + K+ DFG ++ V VK
Sbjct: 141 LLHFAADVARGMDYLSQKQFI-HRNLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KT 196
Query: 231 ISYICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM 268
+ + R+ L + YTT D+WS G ++ E++
Sbjct: 197 MGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 232
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 132
Y R +G GSFG ++ + GE VAIK ++ +++ V +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 70
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ + D Y +V+E + ++ + FN +++ + V L A Q+ + YIH S
Sbjct: 71 RWCGAEGD--YNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIH-SK 124
Query: 193 GVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 222
HRD+KP N L + + V + DFG AK
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 73 YMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 132
Y R +G GSFG ++ + GE VAIK ++ +++ V +
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 68
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI 192
+ + D Y +V+E + ++ + FN +++ + V L A Q+ + YIH S
Sbjct: 69 RWCGAEGD--YNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIH-SK 122
Query: 193 GVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 222
HRD+KP N L + + V + DFG AK
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 42/209 (20%)
Query: 175 KLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 231
K Y + A+ IH+ G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 232 SYICSRYYRAPELIFGATE----------YTTAIDIWSAGCVVAELMLGKPLFPGDSGVD 281
S + + Y PE I + + D+WS GC++ + GK F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 282 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS 341
Q++ I L ++PN+ E +FP I P++ + D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI---------PEK---DLQDVLKCCLKRD 308
Query: 342 PNLRCTALDALIHPFFDELRDPNARLPSG 370
P R + + L HP+ P ++ G
Sbjct: 309 PKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 137/344 (39%), Gaps = 70/344 (20%)
Query: 49 GTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDK 108
GTE + ++ GR Y + +G G VFQ E + AIK V ++
Sbjct: 14 GTENLYFQSMSVKGR--------IYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE 64
Query: 109 -------RYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKH 161
Y+N +L H + + ++ + TD+ Y+ +V+E ++ +K
Sbjct: 65 ADNQTLDSYRNEIAYLNKLQQHSDKI-IRLYDYEITDQ---YIYMVMECGNIDLNSWLKK 120
Query: 162 FNKLN--QRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG 219
++ +R K Y + A+ IH+ G+ H D+KP N L+ +KL DFG
Sbjct: 121 KKSIDPWER------KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFG 171
Query: 220 SAKVLVKGEPNI---SYICSRYYRAPELIFGATE----------YTTAIDIWSAGCVVAE 266
A + ++ S + + Y PE I + + D+WS GC++
Sbjct: 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231
Query: 267 LMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRM 326
+ GK F Q++ I L ++PN+ E +FP I P++
Sbjct: 232 MTYGKTPF------QQIINQISKLHA-------IIDPNH-EIEFPDI---------PEK- 267
Query: 327 PPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSG 370
+ D++ L+ P R + + L HP+ P ++ G
Sbjct: 268 --DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 42/209 (20%)
Query: 175 KLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 231
K Y + A+ IH+ G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 232 SYICSRYYRAPELIFGATE----------YTTAIDIWSAGCVVAELMLGKPLFPGDSGVD 281
S + + Y PE I + + D+WS GC++ + GK F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 282 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS 341
Q++ I L ++PN+ E +FP I P++ + D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI---------PEK---DLQDVLKCCLKRD 308
Query: 342 PNLRCTALDALIHPFFDELRDPNARLPSG 370
P R + + L HP+ P ++ G
Sbjct: 309 PKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 42/209 (20%)
Query: 175 KLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 231
K Y + A+ IH+ G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 232 SYICSRYYRAPELIFGATE----------YTTAIDIWSAGCVVAELMLGKPLFPGDSGVD 281
S + + Y PE I + + D+WS GC++ + GK F
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 282 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS 341
Q++ I L ++PN+ E +FP I P++ + D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI---------PEK---DLQDVLKCCLKRD 308
Query: 342 PNLRCTALDALIHPFFDELRDPNARLPSG 370
P R + + L HP+ P ++ G
Sbjct: 309 PKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 42/209 (20%)
Query: 175 KLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 231
K Y + A+ IH+ G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 111 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 167
Query: 232 SYICSRYYRAPELIFGATE----------YTTAIDIWSAGCVVAELMLGKPLFPGDSGVD 281
S + + Y PE I + + D+WS GC++ + GK F
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 221
Query: 282 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS 341
Q++ I L ++PN+ E +FP I P++ + D++ L+
Sbjct: 222 QIINQISKLHA-------IIDPNH-EIEFPDI---------PEK---DLQDVLKCCLKRD 261
Query: 342 PNLRCTALDALIHPFFDELRDPNARLPSG 370
P R + + L HP+ P ++ G
Sbjct: 262 PKQRISIPELLAHPYVQIQTHPVNQMAKG 290
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 42/209 (20%)
Query: 175 KLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 231
K Y + A+ IH+ G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 114 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 170
Query: 232 SYICSRYYRAPELIFGATE----------YTTAIDIWSAGCVVAELMLGKPLFPGDSGVD 281
S + + Y PE I + + D+WS GC++ + GK F
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 224
Query: 282 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS 341
Q++ I L ++PN+ E +FP I P++ + D++ L+
Sbjct: 225 QIINQISKLHA-------IIDPNH-EIEFPDI---------PEK---DLQDVLKCCLKRD 264
Query: 342 PNLRCTALDALIHPFFDELRDPNARLPSG 370
P R + + L HP+ P ++ G
Sbjct: 265 PKQRISIPELLAHPYVQIQTHPVNQMAKG 293
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 42/209 (20%)
Query: 175 KLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 231
K Y + A+ IH+ G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 110 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 166
Query: 232 SYICSRYYRAPELIFGATE----------YTTAIDIWSAGCVVAELMLGKPLFPGDSGVD 281
S + + Y PE I + + D+WS GC++ + GK F
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 220
Query: 282 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYS 341
Q++ I L ++PN+ E +FP I P++ + D++ L+
Sbjct: 221 QIINQISKLHA-------IIDPNH-EIEFPDI---------PEK---DLQDVLKCCLKRD 260
Query: 342 PNLRCTALDALIHPFFDELRDPNARLPSG 370
P R + + L HP+ P ++ G
Sbjct: 261 PKQRISIPELLAHPYVQIQTHPVNQMAKG 289
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 69/314 (21%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 132 C-----FFSTTDKDELYLNLVLEYVPETVHRVVKHF---------NKLNQRMPMIYVKL- 176
C K + L +V+E + H +K + N + P + +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISY 233
A +I ++Y++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 135 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKG 192
Query: 234 ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGT 292
+ + APE + +TT+ D+WS G V+ E+ L + + G S +Q+++ +
Sbjct: 193 LLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV----- 245
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
M+ Y + P P DL+ Q++PN+R T L+ +
Sbjct: 246 --------MDGGYLD--------------QPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
Query: 353 ------IHPFFDEL 360
+HP F E+
Sbjct: 284 NLLKDDLHPSFPEV 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 136/344 (39%), Gaps = 70/344 (20%)
Query: 49 GTETGHIIVTTIGGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDK 108
GTE + ++ GR Y + +G G VFQ E + AIK V ++
Sbjct: 14 GTENLYFQSMSVKGR--------IYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE 64
Query: 109 -------RYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKH 161
Y+N +L H + + ++ + TD+ Y+ +V+E ++ +K
Sbjct: 65 ADNQTLDSYRNEIAYLNKLQQHSDKI-IRLYDYEITDQ---YIYMVMECGNIDLNSWLKK 120
Query: 162 FNKLN--QRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFG 219
++ +R K Y + A+ IH+ G+ H D+KP N L+ +KL DFG
Sbjct: 121 KKSIDPWER------KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFG 171
Query: 220 SAKVLVKGEPNI---SYICSRYYRAPELIFGATE----------YTTAIDIWSAGCVVAE 266
A + + S + + Y PE I + + D+WS GC++
Sbjct: 172 IANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231
Query: 267 LMLGKPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRM 326
+ GK F Q++ I L ++PN+ E +FP I P++
Sbjct: 232 MTYGKTPF------QQIINQISKLHA-------IIDPNH-EIEFPDI---------PEK- 267
Query: 327 PPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNARLPSG 370
+ D++ L+ P R + + L HP+ P ++ G
Sbjct: 268 --DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 48/231 (20%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTM-RLLDHPN 125
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 126 VVSL--------------KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+V+L ++C + LN + + +K + R P+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDL------LNFLR-------RKAEADLDKEDGR-PL 157
Query: 172 IYVKL--YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
L ++ Q+ + ++++ S HRD+ +N+L+ + H K+ DFG A+ ++
Sbjct: 158 ELRDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSN 215
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
I +R + APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 57 VTTIGGRNGQPKQTISYMAERIV-----GQGSFGVVFQAKCLETGETVAIK---KVLQDK 108
+TT G +G P +A IV G+G FG V++ K GE VA+K +
Sbjct: 23 MTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERS 80
Query: 109 RYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDE---LYLNLVLEYVPETVHRVVKHFNKL 165
++ E+ +L H N++ F + +KD L LV +Y H F+ L
Sbjct: 81 WFREAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVSDY-----HEHGSLFDYL 131
Query: 166 NQRMPMI--YVKLYAYQIFRALSYIHRSI-------GVCHRDIKPQNLLVNPHTHQVKLC 216
N+ + +KL A L+++H I + HRD+K +N+LV + +
Sbjct: 132 NRYTVTVEGMIKL-ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIA 189
Query: 217 DFG------SAKVLVKGEPNISYICSRYYRAPELIFGAT-----EYTTAIDIWSAGCVVA 265
D G SA + PN + ++ Y APE++ + E DI++ G V
Sbjct: 190 DLGLAVRHDSATDTIDIAPN-HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248
Query: 266 EL 267
E+
Sbjct: 249 EI 250
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
VG+G +G V++ L GE+VA+K + ++ E+ LL H N++
Sbjct: 16 VGKGRYGEVWRG--LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDM- 72
Query: 136 TTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI--- 192
T+ L L+ Y H + F + P + ++L A L+++H I
Sbjct: 73 TSRNSSTQLWLITHYHE---HGSLYDFLQRQTLEPHLALRL-AVSAACGLAHLHVEIFGT 128
Query: 193 ----GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-----NISYICSRYYRAPE 243
+ HRD K +N+LV + Q + D G A + +G N + ++ Y APE
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 244 LI--------FGATEYTTAIDIWSAGCVVAEL 267
++ F + ++T DIW+ G V+ E+
Sbjct: 188 VLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
++ Q+ + ++++ S HRD+ +N+L+ + H K+ DFG A+ ++ I +
Sbjct: 163 FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNA 220
Query: 237 RY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
R + APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 221 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 48/231 (20%)
Query: 77 RIVGQGSFGVVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 125
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 126 VVSL--------------KHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPM 171
+V+L ++C + LN + + +K + R P+
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDL------LNFLR-------RKAEADLDKEDGR-PL 149
Query: 172 IYVKL--YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 229
L ++ Q+ + ++++ S HRD+ +N+L+ + H K+ DFG A+ ++
Sbjct: 150 ELRDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSN 207
Query: 230 NISYICSRY---YRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPG 276
I +R + APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 57 VTTIGGRNGQPKQTISYMAERIV-----GQGSFGVVFQAKCLETGETVAIK---KVLQDK 108
+TT G +G P +A IV G+G FG V++ K GE VA+K +
Sbjct: 10 MTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERS 67
Query: 109 RYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDE---LYLNLVLEYVPETVHRVVKHFNKL 165
++ E+ +L H N++ F + +KD L LV +Y H F+ L
Sbjct: 68 WFREAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVSDY-----HEHGSLFDYL 118
Query: 166 NQRMPMI--YVKLYAYQIFRALSYIHRSI-------GVCHRDIKPQNLLVNPHTHQVKLC 216
N+ + +KL A L+++H I + HRD+K +N+LV + +
Sbjct: 119 NRYTVTVEGMIKL-ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIA 176
Query: 217 DFG------SAKVLVKGEPNISYICSRYYRAPELIFGAT-----EYTTAIDIWSAGCVVA 265
D G SA + PN + ++ Y APE++ + E DI++ G V
Sbjct: 177 DLGLAVRHDSATDTIDIAPN-HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 235
Query: 266 EL 267
E+
Sbjct: 236 EI 237
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 51/226 (22%)
Query: 76 ERIVGQGSFGVVFQAKCLETGET-----VAIKKV----LQDKRYKNRELQTMRLLDHPNV 126
+R +G+G+FG VF A+C T VA+K + L ++ RE + + L H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV-------------PETVHRVVKHFNKLNQRMPMIY 173
V + D D L +V EY+ P+ + V + + +
Sbjct: 80 VKF---YGVCGDGDPLI--MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ A QI + Y+ S HRD+ +N LV + VK+ DFG ++
Sbjct: 135 MLHIASQIASGMVYL-ASQHFVHRDLATRNCLVGANL-LVKIGDFGMSR---------DV 183
Query: 234 ICSRYYRA------------PELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR PE I ++TT D+WS G ++ E+
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEI 228
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 25/212 (11%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQD--KRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G+FG VF + VA+K + K + LQ R+L HPN+V L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T K +Y +V+E V L + VK + A + +
Sbjct: 179 GVCTQKQPIY--IVMELVQGG-----DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 194 VC--HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE-LIFG 247
C HRD+ +N LV + +K+ DFG ++ G S + + APE L +G
Sbjct: 232 KCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 248 ATEYTTAIDIWSAGCVVAE-LMLGKPLFPGDS 278
Y++ D+WS G ++ E LG +P S
Sbjct: 291 --RYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 136/323 (42%), Gaps = 87/323 (26%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 79
Query: 132 C-----FFSTTDKDELYLNLVLEYVP----ETVHRVVKHFNKLNQRMP------MIYVKL 176
C K + L +V+E + ++ R ++ + N P MI +
Sbjct: 80 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM-- 136
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
A +I ++Y++ V HR++ +N +V H VK+ DFG + + + +
Sbjct: 137 -AAEIADGMAYLNAKKFV-HRNLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 184
Query: 237 RYYR------------APELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQL 283
YYR APE + +TT+ D+WS G V+ E+ L + + G S +Q+
Sbjct: 185 DYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 242
Query: 284 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPN 343
++ + M+ Y + P P DL+ Q++PN
Sbjct: 243 LKFV-------------MDGGYLD--------------QPDNCPERVTDLMRMCWQFNPN 275
Query: 344 LRCTALDAL------IHPFFDEL 360
+R T L+ + +HP F E+
Sbjct: 276 MRPTFLEIVNLLKDDLHPSFPEV 298
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 136/323 (42%), Gaps = 87/323 (26%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 132 C-----FFSTTDKDELYLNLVLEYVP----ETVHRVVKHFNKLNQRMP------MIYVKL 176
C K + L +V+E + ++ R ++ + N P MI +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM-- 135
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
A +I ++Y++ V HR++ +N +V H VK+ DFG + + + +
Sbjct: 136 -AAEIADGMAYLNAKKFV-HRNLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 183
Query: 237 RYYR------------APELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQL 283
YYR APE + +TT+ D+WS G V+ E+ L + + G S +Q+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 241
Query: 284 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPN 343
++ + M+ Y + P P DL+ Q++PN
Sbjct: 242 LKFV-------------MDGGYLD--------------QPDNCPERVTDLMRMCWQFNPN 274
Query: 344 LRCTALDAL------IHPFFDEL 360
+R T L+ + +HP F E+
Sbjct: 275 MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 135/323 (41%), Gaps = 87/323 (26%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 77
Query: 132 C-----FFSTTDKDELYLNLVLEYVP----ETVHRVVKHFNKLNQRMP------MIYVKL 176
C K + L +V+E + ++ R ++ + N P MI +
Sbjct: 78 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM-- 134
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
A +I ++Y++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 135 -AAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 182
Query: 237 RYYR------------APELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQL 283
YYR APE + +TT+ D+WS G V+ E+ L + + G S +Q+
Sbjct: 183 DYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 240
Query: 284 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPN 343
++ + M+ Y + P P DL+ Q++P
Sbjct: 241 LKFV-------------MDGGYLD--------------QPDNCPERVTDLMRMCWQFNPK 273
Query: 344 LRCTALDAL------IHPFFDEL 360
+R T L+ + +HP F E+
Sbjct: 274 MRPTFLEIVNLLKDDLHPSFPEV 296
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 69/314 (21%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 75
Query: 132 C-----FFSTTDKDELYLNLVLEYVPETVHRVVKHF---------NKLNQRMPMIYVKL- 176
C K + L +V+E + H +K + N + P + +
Sbjct: 76 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 131
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISY 233
A +I ++Y++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 132 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKG 189
Query: 234 ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGT 292
+ + APE + +TT+ D+WS G V+ E+ L + + G S +Q+++ +
Sbjct: 190 LLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV----- 242
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
M+ Y + P P DL+ Q++P +R T L+ +
Sbjct: 243 --------MDGGYLD--------------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
Query: 353 ------IHPFFDEL 360
+HP F E+
Sbjct: 281 NLLKDDLHPSFPEV 294
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 69/314 (21%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 132 C-----FFSTTDKDELYLNLVLEYVPETVHRVVKHF---------NKLNQRMPMIYVKL- 176
C K + L +V+E + H +K + N + P + +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISY 233
A +I ++Y++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 135 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKG 192
Query: 234 ICSRYYRAPELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQLVEIIKVLGT 292
+ + APE + +TT+ D+WS G V+ E+ L + + G S +Q+++ +
Sbjct: 193 LLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV----- 245
Query: 293 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDAL 352
M+ Y + P P DL+ Q++P +R T L+ +
Sbjct: 246 --------MDGGYLD--------------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 353 ------IHPFFDEL 360
+HP F E+
Sbjct: 284 NLLKDDLHPSFPEV 297
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 29/214 (13%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQD--KRYKNRELQTMRLL---DHPNVVSLKHCF 133
+G+G+FG VF + VA+K + K + LQ R+L HPN+V L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 134 FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIG 193
T K +Y +V+E V L + VK + A + +
Sbjct: 179 GVCTQKQPIY--IVMELVQGG-----DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 194 VC--HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE- 250
C HRD+ +N LV + +K+ DFG + + E + Y S R + + A E
Sbjct: 232 KCCIHRDLAARNCLVT-EKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 251 -----YTTAIDIWSAGCVVAE-LMLGKPLFPGDS 278
Y++ D+WS G ++ E LG +P S
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 135/323 (41%), Gaps = 87/323 (26%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 132 C-----FFSTTDKDELYLNLVLEYVP----ETVHRVVKHFNKLNQRMP------MIYVKL 176
C K + L +V+E + ++ R ++ + N P MI +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM-- 135
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
A +I ++Y++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 136 -AAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 183
Query: 237 RYYR------------APELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQL 283
YYR APE + +TT+ D+WS G V+ E+ L + + G S +Q+
Sbjct: 184 AYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 241
Query: 284 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPN 343
++ + M+ Y + P P DL+ Q++P
Sbjct: 242 LKFV-------------MDGGYLD--------------QPDNCPERVTDLMRMCWQFNPK 274
Query: 344 LRCTALDAL------IHPFFDEL 360
+R T L+ + +HP F E+
Sbjct: 275 MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 135/323 (41%), Gaps = 87/323 (26%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 132 C-----FFSTTDKDELYLNLVLEYVP----ETVHRVVKHFNKLNQRMP------MIYVKL 176
C K + L +V+E + ++ R ++ + N P MI +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM-- 135
Query: 177 YAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 236
A +I ++Y++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 136 -AAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 183
Query: 237 RYYR------------APELIFGATEYTTAIDIWSAGCVVAELM-LGKPLFPGDSGVDQL 283
YYR APE + +TT+ D+WS G V+ E+ L + + G S +Q+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 241
Query: 284 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPN 343
++ + M+ Y + P P DL+ Q++P
Sbjct: 242 LKFV-------------MDGGYLD--------------QPDNCPERVTDLMRMCWQFNPK 274
Query: 344 LRCTALDAL------IHPFFDEL 360
+R T L+ + +HP F E+
Sbjct: 275 MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 70
Query: 136 TTDKDE---LYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVKLYAYQIFRALSYIHR 190
+KD L LV +Y H F+ LN+ + +KL A L+++H
Sbjct: 71 ADNKDNGTWTQLWLVSDY-----HEHGSLFDYLNRYTVTVEGMIKL-ALSTASGLAHLHM 124
Query: 191 SI-------GVCHRDIKPQNLLVNPHTHQVKLCDFG------SAKVLVKGEPNISYICSR 237
I + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTK 182
Query: 238 YYRAPELIFGAT-----EYTTAIDIWSAGCVVAEL 267
Y APE++ + E DI++ G V E+
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 67
Query: 136 TTDKDE---LYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVKLYAYQIFRALSYIHR 190
+KD L LV +Y H F+ LN+ + +KL A L+++H
Sbjct: 68 ADNKDNGTWTQLWLVSDY-----HEHGSLFDYLNRYTVTVEGMIKL-ALSTASGLAHLHM 121
Query: 191 SI-------GVCHRDIKPQNLLVNPHTHQVKLCDFG------SAKVLVKGEPNISYICSR 237
I + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTK 179
Query: 238 YYRAPELIFGAT-----EYTTAIDIWSAGCVVAEL 267
Y APE++ + E DI++ G V E+
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 65
Query: 136 TTDKDE---LYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVKLYAYQIFRALSYIHR 190
+KD L LV +Y H F+ LN+ + +KL A L+++H
Sbjct: 66 ADNKDNGTWTQLWLVSDY-----HEHGSLFDYLNRYTVTVEGMIKL-ALSTASGLAHLHM 119
Query: 191 SI-------GVCHRDIKPQNLLVNPHTHQVKLCDFG------SAKVLVKGEPNISYICSR 237
I + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTK 177
Query: 238 YYRAPELIFGAT-----EYTTAIDIWSAGCVVAEL 267
Y APE++ + E DI++ G V E+
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 71 ISYMAERIVGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMRLLDH----P 124
+ Y R +G+GSFGV+F+ L + VAIK D E +T +LL P
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP 69
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
NV +F ++ L+ LV++ + ++ ++ + ++ + V + A Q+
Sbjct: 70 NVY-----YFG---QEGLHNVLVIDLLGPSLEDLL---DLCGRKFSVKTVAMAAKQMLAR 118
Query: 185 LSYIHRSIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAK 222
+ IH + +RDIKP N L+ + + + + + DFG K
Sbjct: 119 VQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 64
Query: 136 TTDKDE---LYLNLVLEYVPETVHRVVKHFNKLNQRMPMI--YVKLYAYQIFRALSYIHR 190
+KD L LV +Y H F+ LN+ + +KL A L+++H
Sbjct: 65 ADNKDNGTWTQLWLVSDY-----HEHGSLFDYLNRYTVTVEGMIKL-ALSTASGLAHLHM 118
Query: 191 SI-------GVCHRDIKPQNLLVNPHTHQVKLCDFG------SAKVLVKGEPNISYICSR 237
I + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTK 176
Query: 238 YYRAPELIFGAT-----EYTTAIDIWSAGCVVAEL 267
Y APE++ + E DI++ G V E+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 71 ISYMAERIVGQGSFGVVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMRLLDH----P 124
+ Y R +G+GSFGV+F+ L + VAIK D E +T +LL P
Sbjct: 9 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP 68
Query: 125 NVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRA 184
NV +F ++ L+ LV++ + ++ ++ + ++ + V + A Q+
Sbjct: 69 NVY-----YFG---QEGLHNVLVIDLLGPSLEDLL---DLCGRKFSVKTVAMAAKQMLAR 117
Query: 185 LSYIHRSIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAK 222
+ IH + +RDIKP N L+ + + + + + DFG K
Sbjct: 118 VQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSLKHCFFST 136
+G G+FG + K L T E VAIK R L+ + L + +F
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYYFGP 67
Query: 137 TDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCH 196
K Y +VLE + ++ + F+ ++ + V + A Q+ + Y+H S + +
Sbjct: 68 XGK---YNAMVLELLGPSLEDL---FDLCDRTFTLKTVLMIAIQLLSRMEYVH-SKNLIY 120
Query: 197 RDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 228
RD+KP+N L+ N H + + DFG AK + E
Sbjct: 121 RDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPE 156
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 38/189 (20%)
Query: 61 GGRNGQPKQTISYMAERIVGQGSFGVVFQAKCLE--TGETVAIKKVLQ------DKRYKN 112
G + + T + +G G FG VF KC++ G AIK+ + D++
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNAL 58
Query: 113 RELQTMRLL-DHPNVVSLKHCFFSTTDKDELYL--------NLVLEYVPETVHRVVKHFN 163
RE+ +L H +VV +FS +D+ L + + + E +R++ +F
Sbjct: 59 REVYAHAVLGQHSHVVR----YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFK 113
Query: 164 KLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLV------NPHTHQVKLCD 217
+ +K Q+ R L YIH S+ + H DIKP N+ + N + + D
Sbjct: 114 EAE-------LKDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165
Query: 218 FGSAKVLVK 226
+ S KV+ K
Sbjct: 166 WASNKVMFK 174
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 27/212 (12%)
Query: 77 RIVGQGSFGVVFQAKCLETGET---VAIKKVLQDKRYKN------RELQTMRLLDHPNVV 127
R++G+G FG V +A+ + + VA+K + D + RE M+ DHP+V
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 128 SLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHF--------NKLNQRMPMIYVKLYAY 179
L + K L + +V+ +P H + F N N +P+ + +
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVI--LPFMKHGDLHAFLLASRIGENPFN--LPLQTLVRFMV 144
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY- 238
I + Y+ S HRD+ +N ++ V + DFG ++ + G+ S+
Sbjct: 145 DIACGMEYLS-SRNFIHRDLAARNCML-AEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 239 --YRAPELIFGATEYTTAIDIWSAGCVVAELM 268
+ A E + YT D+W+ G + E+M
Sbjct: 203 VKWLALESL-ADNLYTVHSDVWAFGVTMWEIM 233
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 54/226 (23%)
Query: 76 ERIVGQGSFGVVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNV 126
+R +G+G+FG VF A+C E + + K L+D ++ +RE + + L H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 127 VSLKHCFFSTTDKDELYLNLVLEYV-------------PETVHRVVKHFNKLNQRMPMIY 173
V + + D L +V EY+ P+ V + + M++
Sbjct: 78 VKF---YGVCVEGDPLI--MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
+ A QI + Y+ S HRD+ +N LV + VK+ DFG ++
Sbjct: 133 I---AQQIAAGMVYL-ASQHFVHRDLATRNCLVGENL-LVKIGDFGMSR---------DV 178
Query: 234 ICSRYYRA------------PELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR PE I ++TT D+WS G V+ E+
Sbjct: 179 YSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEI 223
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 38/171 (22%)
Query: 79 VGQGSFGVVFQAKCLE--TGETVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSL 129
+G G FG VF KC++ G AIK+ + D++ RE+ +L H +VV
Sbjct: 17 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 73
Query: 130 KHCFFSTTDKDELYL--------NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
+FS +D+ L + + + E +R++ +F + +K Q+
Sbjct: 74 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAE-------LKDLLLQV 122
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 226
R L YIH S+ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 123 GRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 38/171 (22%)
Query: 79 VGQGSFGVVFQAKCLE--TGETVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSL 129
+G G FG VF KC++ G AIK+ + D++ RE+ +L H +VV
Sbjct: 17 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 73
Query: 130 KHCFFSTTDKDELYL--------NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
+FS +D+ L + + + E +R++ +F + +K Q+
Sbjct: 74 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAE-------LKDLLLQV 122
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 226
R L YIH S+ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 123 GRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 38/171 (22%)
Query: 79 VGQGSFGVVFQAKCLE--TGETVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSL 129
+G G FG VF KC++ G AIK+ + D++ RE+ +L H +VV
Sbjct: 15 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 71
Query: 130 KHCFFSTTDKDELYL--------NLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQI 181
+FS +D+ L + + + E +R++ +F + +K Q+
Sbjct: 72 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAE-------LKDLLLQV 120
Query: 182 FRALSYIHRSIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 226
R L YIH S+ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 121 GRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 170
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC-FFSTT 137
+G G+FG + K L T E VAIK R L+ + +F
Sbjct: 12 IGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQVYYFGPX 71
Query: 138 DKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHR 197
K Y +VLE + ++ + F+ ++ + V + A Q+ + Y+H + + +R
Sbjct: 72 GK---YNAMVLELLGPSLEDL---FDLCDRTFTLKTVLMIAIQLITRMEYVH-TKSLIYR 124
Query: 198 DIKPQNLLVN-PHT---HQVKLCDFGSAKVLVKGE 228
D+KP+N LV P T H + + DFG AK + E
Sbjct: 125 DVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPE 159
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 41/238 (17%)
Query: 59 TIGGRNGQPKQTISYMAERI-----VGQGSFGVVFQAKCLETGETVAIKKVL---QDKRY 110
T G +G P +A +I VG+G +G V++ GE VA+K + +
Sbjct: 20 TSGSGSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWF 77
Query: 111 KNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLN-QRM 169
+ EL +L H N++ T+ L L+ Y H + ++ L +
Sbjct: 78 RETELYNTVMLRHENILGFIASDM-TSRHSSTQLWLITHY-----HEMGSLYDYLQLTTL 131
Query: 170 PMIYVKLYAYQIFRALSYIHRSI-------GVCHRDIKPQNLLVNPHTHQVKLCDFGSA- 221
+ I L+++H I + HRD+K +N+LV + Q + D G A
Sbjct: 132 DTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAV 190
Query: 222 -------KVLVKGEPNISYICSRYYRAPELI-----FGATEYTTAIDIWSAGCVVAEL 267
++ V P + ++ Y APE++ + +DIW+ G V+ E+
Sbjct: 191 MHSQSTNQLDVGNNPRVG---TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
VG+G +G V++ GE VA+K + ++ EL +L H N++
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM- 72
Query: 136 TTDKDELYLNLVLEYVPETVHRVVKHFNKLN-QRMPMIYVKLYAYQIFRALSYIHRSI-- 192
T+ L L+ Y H + ++ L + + I L+++H I
Sbjct: 73 TSRHSSTQLWLITHY-----HEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 193 -----GVCHRDIKPQNLLVNPHTHQVKLCDFGSA--------KVLVKGEPNISYICSRYY 239
+ HRD+K +N+LV + Q + D G A ++ V P + ++ Y
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPRVG---TKRY 183
Query: 240 RAPELI-----FGATEYTTAIDIWSAGCVVAEL 267
APE++ + +DIW+ G V+ E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNVVSLKHCFFS 135
VG+G +G V++ GE VA+K + ++ EL +L H N++
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM- 72
Query: 136 TTDKDELYLNLVLEYVPETVHRVVKHFNKLN-QRMPMIYVKLYAYQIFRALSYIHRSI-- 192
T+ L L+ Y H + ++ L + + I L+++H I
Sbjct: 73 TSRHSSTQLWLITHY-----HEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 193 -----GVCHRDIKPQNLLVNPHTHQVKLCDFGSA--------KVLVKGEPNISYICSRYY 239
+ HRD+K +N+LV + Q + D G A ++ V P + ++ Y
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPRVG---TKRY 183
Query: 240 RAPELI-----FGATEYTTAIDIWSAGCVVAEL 267
APE++ + +DIW+ G V+ E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 50/223 (22%)
Query: 79 VGQGSFGVVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 129
+G+G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 107
Query: 130 KHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRM---------PMIYVKLYAY 179
FF + L +V EY+ ++R ++ + + P+ +L A
Sbjct: 108 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 180 --QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Q+ + Y+ + HRD+ +N LV VK+ DFG ++ + +
Sbjct: 164 ASQVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 212
Query: 238 YYRA------------PELIFGATEYTTAIDIWSAGCVVAELM 268
YYR PE I ++TT D+WS G V+ E+
Sbjct: 213 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 254
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSLKHCFFST 136
+G G+FG + K L T E VAIK R L+ + L + + + +F
Sbjct: 17 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVY-YFGP 75
Query: 137 TDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCH 196
K Y +VLE + ++ + F+ ++ + V + A Q+ + Y+H S + +
Sbjct: 76 CGK---YNAMVLELLGPSLEDL---FDLCDRTFSLKTVLMIAIQLISRMEYVH-SKNLIY 128
Query: 197 RDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 228
RD+KP+N L+ N + + DFG AK + E
Sbjct: 129 RDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPE 164
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 50/223 (22%)
Query: 79 VGQGSFGVVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 129
+G+G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 78
Query: 130 KHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRM---------PMIYVKLYAY 179
FF + L +V EY+ ++R ++ + + P+ +L A
Sbjct: 79 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 180 --QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Q+ + Y+ + HRD+ +N LV VK+ DFG ++ + +
Sbjct: 135 ASQVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 183
Query: 238 YYRA------------PELIFGATEYTTAIDIWSAGCVVAELM 268
YYR PE I ++TT D+WS G V+ E+
Sbjct: 184 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 50/222 (22%)
Query: 79 VGQGSFGVVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 129
+G+G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 84
Query: 130 KHCFFSTTDKDELYLNLVLEYVPE-TVHRVVKHFNKLNQRM---------PMIYVKLYAY 179
FF + L +V EY+ ++R ++ + + P+ +L A
Sbjct: 85 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 180 --QIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
Q+ + Y+ + HRD+ +N LV VK+ DFG ++ + +
Sbjct: 141 ASQVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 189
Query: 238 YYRA------------PELIFGATEYTTAIDIWSAGCVVAEL 267
YYR PE I ++TT D+WS G V+ E+
Sbjct: 190 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEI 230
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 14/156 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSLKHCFFST 136
+G G+FG + K L T E VAIK R L+ + L + + + +F
Sbjct: 17 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVY-YFGP 75
Query: 137 TDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCH 196
K Y +VLE + ++ + F+ ++ + V + A Q+ + Y+H S + +
Sbjct: 76 CGK---YNAMVLELLGPSLEDL---FDLCDRTFSLKTVLMIAIQLISRMEYVH-SKNLIY 128
Query: 197 RDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 228
RD+KP+N L+ N + + DF AK + E
Sbjct: 129 RDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 14/156 (8%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSLKHCFFST 136
+G G+FG + K L T E VAIK R L+ + L + + + +F
Sbjct: 38 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVY-YFGP 96
Query: 137 TDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCH 196
K Y +VLE + ++ + F+ ++ + V + A Q+ + Y+H S + +
Sbjct: 97 CGK---YNAMVLELLGPSLEDL---FDLCDRTFSLKTVLMIAIQLISRMEYVH-SKNLIY 149
Query: 197 RDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 228
RD+KP+N L+ N + + DF AK + E
Sbjct: 150 RDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 185
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSL-KHC 132
++G G FG V++ L G VA+K+ Q E++T+ HP++VSL C
Sbjct: 46 LIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQI--FRALSYIH 189
+++E+ L+ +Y+ + +H + M M + + I R L Y+H
Sbjct: 105 ----DERNEMI--LIYKYMENG--NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-----------VLVKGEPNISYICSRY 238
+ + HRD+K N+L++ + K+ DFG +K +VKG + YI Y
Sbjct: 157 -TRAIIHRDVKSINILLDEN-FVPKITDFGISKKGTELGQTHLXXVVKG--TLGYIDPEY 212
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGK 271
+ L T D++S G V+ E++ +
Sbjct: 213 FIKGRL-------TEKSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 78 IVGQGSFGVVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSL-KHC 132
++G G FG V++ L G VA+K+ Q E++T+ HP++VSL C
Sbjct: 46 LIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 133 FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQ-RMPMIYVKLYAYQI--FRALSYIH 189
+++E+ L+ +Y+ + +H + M M + + I R L Y+H
Sbjct: 105 ----DERNEMI--LIYKYMENG--NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 190 RSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-----------VLVKGEPNISYICSRY 238
+ + HRD+K N+L++ + K+ DFG +K +VKG + YI Y
Sbjct: 157 -TRAIIHRDVKSINILLDEN-FVPKITDFGISKKGTELDQTHLXXVVKG--TLGYIDPEY 212
Query: 239 YRAPELIFGATEYTTAIDIWSAGCVVAELMLGK 271
+ L T D++S G V+ E++ +
Sbjct: 213 FIKGRL-------TEKSDVYSFGVVLFEVLCAR 238
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 58/226 (25%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 86
Query: 132 C-----FFSTTDKDELYLNLVLEYV-------------PETVHRVVKHFNKLNQRMPMIY 173
C + + L +++E + PE + V L++ + M
Sbjct: 87 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM-- 143
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
A +I ++Y++ + V HRD+ +N +V VK+ DFG + + +
Sbjct: 144 ----AGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE------- 190
Query: 234 ICSRYYR------------APELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR +PE + +TT D+WS G V+ E+
Sbjct: 191 --TDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 233
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 58/226 (25%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 79
Query: 132 C-----FFSTTDKDELYLNLVLEYV-------------PETVHRVVKHFNKLNQRMPMIY 173
C + + L +++E + PE + V L++ + M
Sbjct: 80 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM-- 136
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
A +I ++Y++ + V HRD+ +N +V VK+ DFG + + +
Sbjct: 137 ----AGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE------- 183
Query: 234 ICSRYYR------------APELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR +PE + +TT D+WS G V+ E+
Sbjct: 184 --TDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 58/226 (25%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 79
Query: 132 C-----FFSTTDKDELYLNLVLEYV-------------PETVHRVVKHFNKLNQRMPMIY 173
C + + L +++E + PE + V L++ + M
Sbjct: 80 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM-- 136
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
A +I ++Y++ + V HRD+ +N +V VK+ DFG + + +
Sbjct: 137 ----AGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE------- 183
Query: 234 ICSRYYR------------APELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR +PE + +TT D+WS G V+ E+
Sbjct: 184 --TDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 58/226 (25%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 73
Query: 132 C-----FFSTTDKDELYLNLVLEYV-------------PETVHRVVKHFNKLNQRMPMIY 173
C + + L +++E + PE + V L++ + M
Sbjct: 74 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM-- 130
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
A +I ++Y++ + V HRD+ +N +V VK+ DFG + + +
Sbjct: 131 ----AGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE------- 177
Query: 234 ICSRYYR------------APELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR +PE + +TT D+WS G V+ E+
Sbjct: 178 --TDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 58/226 (25%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 25 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 80
Query: 132 C-----FFSTTDKDELYLNLVLEYV-------------PETVHRVVKHFNKLNQRMPMIY 173
C + + L +++E + PE + V L++ + M
Sbjct: 81 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM-- 137
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
A +I ++Y++ + V HRD+ +N +V VK+ DFG + + +
Sbjct: 138 ----AGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE------- 184
Query: 234 ICSRYYR------------APELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR +PE + +TT D+WS G V+ E+
Sbjct: 185 --TDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 58/226 (25%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 22 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 77
Query: 132 C-----FFSTTDKDELYLNLVLEYV-------------PETVHRVVKHFNKLNQRMPMIY 173
C + + L +++E + PE + V L++ + M
Sbjct: 78 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM-- 134
Query: 174 VKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 233
A +I ++Y++ + V HRD+ +N +V VK+ DFG + + +
Sbjct: 135 ----AGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE------- 181
Query: 234 ICSRYYR------------APELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR +PE + +TT D+WS G V+ E+
Sbjct: 182 --TDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 224
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 46/245 (18%)
Query: 79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKR---YKNRELQTMRLLDHPNVVSLKHCFFS 135
+G+G +G V+ K GE VA+K + ++ E+ L+ H N++
Sbjct: 45 IGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 136 TTDK-DELYLNLVLEYVPE-TVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSI- 192
T +LYL + +Y +++ +K + M +KL AY L ++H I
Sbjct: 103 GTGSWTQLYL--ITDYHENGSLYDYLKSTTLDAKSM----LKL-AYSSVSGLCHLHTEIF 155
Query: 193 ------GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-----PNISYICSRYYRA 241
+ HRD+K +N+LV + + D G A + P + + ++ Y
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 242 PELI------------FGATEYTTAIDIWS------AGCVVAELML-GKPLFPGDSGVDQ 282
PE++ A Y+ + +W +G +V E L L P D +
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYED 274
Query: 283 LVEII 287
+ EI+
Sbjct: 275 MREIV 279
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGS 220
+ R+L+ + + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKQ-GFWHDDVRPWNVMVDARQH-ARLIDFGS 385
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGS 220
+ R+L+ + + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKQ-GFWHDDVRPWNVMVDARQH-ARLIDFGS 385
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 50/222 (22%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 86
Query: 132 C-----FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRM-------PMIYVKL--Y 177
C + + L +++E + T + + L M P K+
Sbjct: 87 CHHVVRLLGVVSQGQPTL-VIMELM--TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143
Query: 178 AYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 237
A +I ++Y++ + V HRD+ +N +V VK+ DFG + + + +
Sbjct: 144 AGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TD 192
Query: 238 YYR------------APELIFGATEYTTAIDIWSAGCVVAEL 267
YYR +PE + +TT D+WS G V+ E+
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 54/224 (24%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 126
R +GQGSFG+V++ AK + E VAIK V + + R E M+ + +V
Sbjct: 53 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 112
Query: 127 VSLKHCF-----------FSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVK 175
V L T + YL + PE + V L++ + M
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR---PEMENNPVLAPPSLSKMIQM---- 165
Query: 176 LYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 235
A +I ++Y++ + V HRD+ +N +V VK+ DFG + + +
Sbjct: 166 --AGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE--------- 212
Query: 236 SRYYR------------APELIFGATEYTTAIDIWSAGCVVAEL 267
+ YYR +PE + +TT D+WS G V+ E+
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 255
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 77 RIVGQGSFGVVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 131
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 21 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 76
Query: 132 C-----FFSTTDKDELYLNLVLEYVPETVHRVVKHFNKLNQRMPMIY------VKLYAYQ 180
C + + L ++ + ++ P++ + A +
Sbjct: 77 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 240
I ++Y++ + V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 137 IADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYR 185
Query: 241 ------------APELIFGATEYTTAIDIWSAGCVVAEL 267
+PE + +TT D+WS G V+ E+
Sbjct: 186 KGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 223
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 181 IFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGS 220
+ R+L+ + + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKK-GFWHDDVRPWNVMVDARQH-ARLIDFGS 385
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 143 YLNLVLEYVPETVHRVVKHFNKLNQRMPMIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQ 202
Y ++++ + ++ + K R ++ + L +I L YIH V H DIK
Sbjct: 126 YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYV-HGDIKAS 181
Query: 203 NLLVN-PHTHQVKLCDFGSA 221
NLL+N + QV L D+G A
Sbjct: 182 NLLLNYKNPDQVYLVDYGLA 201
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVN-PHTHQVKLCDFGSA 221
+I L YIH V H DIK NLL+N + QV L D+G A
Sbjct: 160 RILDILEYIHEHEYV-HGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 180 QIFRALSYIHRSIGVCHRDIKPQNLLVN-PHTHQVKLCDFGSA 221
+I L YIH V H DIK NLL+N + QV L D+G A
Sbjct: 160 RILDILEYIHEHEYV-HGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|1LAX|A Chain A, Crystal Structure Of Male31, A Defective Folding Mutant Of
Maltose-Binding Protein
pdb|1LAX|C Chain C, Crystal Structure Of Male31, A Defective Folding Mutant Of
Maltose-Binding Protein
Length = 370
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 276 GDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA 315
GD G + L E+ K T ++ +P+ E KFPQ+ A
Sbjct: 13 GDKGYNGLAEVGKKFEKDTDPKVTVEHPDKLEEKFPQVAA 52
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,846,231
Number of Sequences: 62578
Number of extensions: 568879
Number of successful extensions: 4813
Number of sequences better than 100.0: 964
Number of HSP's better than 100.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 344
Number of HSP's that attempted gapping in prelim test: 1832
Number of HSP's gapped (non-prelim): 1094
length of query: 409
length of database: 14,973,337
effective HSP length: 101
effective length of query: 308
effective length of database: 8,652,959
effective search space: 2665111372
effective search space used: 2665111372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)