Query 015299
Match_columns 409
No_of_seqs 228 out of 1966
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 05:00:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015299.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015299hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 5.3E-37 1.1E-41 293.8 31.4 321 10-341 8-336 (358)
2 PRK11272 putative DMT superfam 100.0 3.7E-31 8E-36 249.4 27.8 280 15-336 8-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 1.1E-30 2.4E-35 246.9 28.0 281 16-336 5-290 (299)
4 PRK15430 putative chlorampheni 100.0 7.4E-31 1.6E-35 247.7 25.1 281 9-333 2-285 (296)
5 TIGR00950 2A78 Carboxylate/Ami 100.0 2E-30 4.3E-35 240.7 26.1 259 27-328 1-259 (260)
6 PRK10532 threonine and homoser 100.0 2.4E-30 5.2E-35 243.9 26.9 276 13-337 10-285 (293)
7 PRK11689 aromatic amino acid e 100.0 1.5E-30 3.2E-35 245.5 23.9 284 13-335 2-289 (295)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 1.2E-29 2.6E-34 240.5 25.1 284 18-338 5-298 (302)
9 PF06027 DUF914: Eukaryotic pr 100.0 9.1E-28 2E-32 225.3 30.8 300 12-340 10-312 (334)
10 TIGR03340 phn_DUF6 phosphonate 100.0 4.4E-27 9.5E-32 220.5 27.0 275 17-330 3-280 (281)
11 PTZ00343 triose or hexose phos 100.0 6.6E-27 1.4E-31 225.1 25.9 285 13-334 47-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 2.8E-25 6.1E-30 205.6 25.6 248 15-308 2-255 (256)
13 KOG4510 Permease of the drug/m 99.9 8E-29 1.7E-33 216.2 -1.0 294 12-337 35-329 (346)
14 COG0697 RhaT Permeases of the 99.9 3.7E-23 8.1E-28 194.6 27.9 282 12-334 4-288 (292)
15 COG5006 rhtA Threonine/homoser 99.9 4.1E-23 8.9E-28 179.5 24.1 275 16-338 13-287 (292)
16 COG2962 RarD Predicted permeas 99.9 9.5E-22 2.1E-26 175.8 24.3 280 12-336 4-286 (293)
17 PF08449 UAA: UAA transporter 99.9 1.5E-20 3.2E-25 178.1 25.2 281 30-338 15-302 (303)
18 TIGR00776 RhaT RhaT L-rhamnose 99.9 5.5E-21 1.2E-25 179.4 22.1 277 16-333 2-288 (290)
19 KOG2765 Predicted membrane pro 99.9 1.6E-21 3.4E-26 178.8 16.6 304 9-338 8-395 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 3.6E-20 7.9E-25 171.9 7.6 289 16-340 18-314 (316)
21 KOG1443 Predicted integral mem 99.8 3.2E-16 6.9E-21 140.4 22.3 253 44-331 45-313 (349)
22 KOG2234 Predicted UDP-galactos 99.7 7.9E-15 1.7E-19 135.3 29.2 300 15-338 15-327 (345)
23 KOG1580 UDP-galactose transpor 99.7 3.5E-16 7.6E-21 134.8 17.3 256 45-332 54-312 (337)
24 KOG2766 Predicted membrane pro 99.7 5.3E-18 1.1E-22 147.8 5.9 253 43-333 47-299 (336)
25 PF04142 Nuc_sug_transp: Nucle 99.7 3.2E-15 6.8E-20 136.1 18.6 231 75-324 13-244 (244)
26 KOG1581 UDP-galactose transpor 99.7 4.4E-15 9.4E-20 133.3 17.4 266 43-337 50-317 (327)
27 COG2510 Predicted membrane pro 99.6 2.4E-15 5.1E-20 117.7 10.3 135 15-157 3-138 (140)
28 KOG1444 Nucleotide-sugar trans 99.6 3.2E-13 7E-18 123.0 24.7 291 14-340 11-307 (314)
29 KOG1442 GDP-fucose transporter 99.6 2.4E-15 5.2E-20 132.6 7.0 270 43-344 60-338 (347)
30 COG2510 Predicted membrane pro 99.6 1.3E-13 2.9E-18 108.0 14.4 136 194-333 4-139 (140)
31 KOG1583 UDP-N-acetylglucosamin 99.5 6.7E-14 1.5E-18 123.8 12.7 270 45-334 34-315 (330)
32 PF00892 EamA: EamA-like trans 99.5 1.1E-13 2.5E-18 113.0 9.8 125 25-157 1-125 (126)
33 PF00892 EamA: EamA-like trans 99.4 7.4E-13 1.6E-17 108.2 7.2 124 203-331 1-124 (126)
34 KOG3912 Predicted integral mem 99.3 6.1E-11 1.3E-15 105.3 16.3 280 28-332 16-333 (372)
35 KOG4314 Predicted carbohydrate 99.3 3.7E-12 8.1E-17 107.3 7.3 215 90-336 63-279 (290)
36 KOG1582 UDP-galactose transpor 99.3 6.6E-11 1.4E-15 104.6 13.7 278 24-336 52-335 (367)
37 PF03151 TPT: Triose-phosphate 99.3 7E-11 1.5E-15 100.3 12.5 139 194-333 1-153 (153)
38 PF06800 Sugar_transport: Suga 99.3 1.9E-09 4.1E-14 98.0 21.8 221 77-330 43-268 (269)
39 TIGR00950 2A78 Carboxylate/Ami 99.2 2E-10 4.3E-15 106.4 15.0 133 12-153 125-259 (260)
40 PF13536 EmrE: Multidrug resis 99.2 6.1E-11 1.3E-15 95.2 8.5 103 49-158 2-106 (113)
41 PF05653 Mg_trans_NIPA: Magnes 99.2 1.3E-09 2.9E-14 102.2 16.1 279 13-337 5-296 (300)
42 COG5070 VRG4 Nucleotide-sugar 99.1 5.3E-10 1.2E-14 96.2 10.7 288 15-337 9-300 (309)
43 PRK13499 rhamnose-proton sympo 99.1 1E-07 2.3E-12 90.2 26.2 299 13-334 5-342 (345)
44 PRK10532 threonine and homoser 99.1 3.8E-09 8.2E-14 99.7 16.1 136 13-158 146-281 (293)
45 PRK11272 putative DMT superfam 99.1 3.7E-09 7.9E-14 99.7 16.0 138 13-158 148-285 (292)
46 TIGR03340 phn_DUF6 phosphonate 99.1 2.2E-09 4.8E-14 100.7 12.9 133 195-333 3-135 (281)
47 TIGR00803 nst UDP-galactose tr 99.0 1.7E-09 3.8E-14 97.7 11.6 215 104-331 2-222 (222)
48 PRK15430 putative chlorampheni 99.0 2.4E-09 5.1E-14 101.2 12.1 138 190-332 5-144 (296)
49 TIGR00688 rarD rarD protein. T 99.0 4.9E-09 1.1E-13 97.0 11.3 136 193-332 2-141 (256)
50 PRK11689 aromatic amino acid e 99.0 1.8E-08 4E-13 95.1 15.3 133 14-158 155-287 (295)
51 PLN00411 nodulin MtN21 family 98.9 3E-08 6.5E-13 95.6 15.6 137 14-159 188-329 (358)
52 PRK02971 4-amino-4-deoxy-L-ara 98.8 4.5E-08 9.7E-13 79.9 11.0 122 193-336 2-125 (129)
53 PRK11453 O-acetylserine/cystei 98.8 1.5E-07 3.2E-12 89.1 16.3 137 14-157 142-286 (299)
54 PF03151 TPT: Triose-phosphate 98.7 2.8E-07 6E-12 78.1 13.9 133 16-155 1-150 (153)
55 TIGR00817 tpt Tpt phosphate/ph 98.7 8.3E-08 1.8E-12 91.0 11.7 139 13-158 143-293 (302)
56 COG4975 GlcU Putative glucose 98.7 6.4E-09 1.4E-13 91.1 1.7 276 15-333 2-285 (288)
57 PF13536 EmrE: Multidrug resis 98.6 7.7E-08 1.7E-12 77.2 6.9 107 229-336 3-109 (113)
58 KOG2922 Uncharacterized conser 98.6 8.2E-08 1.8E-12 87.8 7.3 279 11-338 17-311 (335)
59 PTZ00343 triose or hexose phos 98.6 1.2E-06 2.5E-11 84.7 15.6 139 13-157 192-347 (350)
60 PRK15051 4-amino-4-deoxy-L-ara 98.6 7.2E-07 1.6E-11 71.0 11.6 70 82-157 39-108 (111)
61 TIGR00776 RhaT RhaT L-rhamnose 98.5 1.5E-06 3.2E-11 81.8 13.0 128 14-157 151-287 (290)
62 COG0697 RhaT Permeases of the 98.5 4E-06 8.8E-11 78.5 15.8 133 14-157 153-286 (292)
63 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.4E-06 2.9E-11 69.4 7.4 67 266-332 42-108 (111)
64 PRK02971 4-amino-4-deoxy-L-ara 98.3 8.3E-06 1.8E-10 66.6 11.5 118 15-157 2-121 (129)
65 COG2962 RarD Predicted permeas 98.3 4.5E-06 9.9E-11 75.7 9.1 139 192-334 6-145 (293)
66 COG5006 rhtA Threonine/homoser 98.2 2.3E-05 5E-10 69.5 12.8 139 10-157 143-281 (292)
67 PF06027 DUF914: Eukaryotic pr 98.2 3E-05 6.4E-10 73.6 13.4 142 11-160 164-307 (334)
68 PF08449 UAA: UAA transporter 98.0 0.00013 2.8E-09 69.2 13.3 131 203-339 10-142 (303)
69 KOG4510 Permease of the drug/m 98.0 3.4E-06 7.3E-11 75.1 2.2 138 190-336 35-172 (346)
70 PF05653 Mg_trans_NIPA: Magnes 98.0 4.8E-05 1E-09 71.6 9.8 122 189-335 3-124 (300)
71 PF06379 RhaT: L-rhamnose-prot 97.9 0.0039 8.4E-08 58.5 20.9 299 14-333 6-340 (344)
72 PF04657 DUF606: Protein of un 97.8 0.00028 6E-09 58.5 11.3 132 194-330 2-138 (138)
73 PRK10452 multidrug efflux syst 97.8 4.9E-05 1.1E-09 60.9 6.5 69 267-335 36-105 (120)
74 PF06800 Sugar_transport: Suga 97.8 0.0003 6.6E-09 64.3 11.3 118 11-136 134-251 (269)
75 PRK10650 multidrug efflux syst 97.6 0.00096 2.1E-08 52.5 10.4 64 87-156 42-106 (109)
76 PRK09541 emrE multidrug efflux 97.6 0.00013 2.8E-09 57.7 5.5 68 268-335 37-105 (110)
77 COG2076 EmrE Membrane transpor 97.6 0.0011 2.3E-08 51.4 10.0 66 86-157 36-102 (106)
78 KOG1441 Glucose-6-phosphate/ph 97.5 0.00033 7.2E-09 65.8 7.8 138 13-158 161-307 (316)
79 PRK10452 multidrug efflux syst 97.5 0.0014 3E-08 52.6 10.0 68 85-158 35-103 (120)
80 PF04657 DUF606: Protein of un 97.5 0.0017 3.8E-08 53.7 10.9 130 17-155 3-138 (138)
81 PRK10650 multidrug efflux syst 97.4 0.0012 2.6E-08 52.0 9.0 63 270-332 44-107 (109)
82 PRK09541 emrE multidrug efflux 97.4 0.00065 1.4E-08 53.7 7.5 67 86-158 36-103 (110)
83 COG2076 EmrE Membrane transpor 97.4 0.0003 6.5E-09 54.5 5.1 65 270-334 39-104 (106)
84 PRK11431 multidrug efflux syst 97.4 0.00043 9.2E-09 54.2 5.7 65 269-333 37-102 (105)
85 PF10639 UPF0546: Uncharacteri 97.3 0.00038 8.1E-09 54.9 5.1 110 21-156 2-112 (113)
86 COG3238 Uncharacterized protei 97.3 0.0029 6.3E-08 52.4 9.9 139 192-334 4-147 (150)
87 KOG2765 Predicted membrane pro 97.2 0.0024 5.2E-08 60.1 9.9 141 12-158 244-390 (416)
88 PRK11431 multidrug efflux syst 97.2 0.0046 1E-07 48.4 10.1 65 87-157 36-101 (105)
89 PF07857 DUF1632: CEO family ( 97.1 0.0067 1.4E-07 55.3 11.7 192 16-218 1-208 (254)
90 PRK13499 rhamnose-proton sympo 97.1 0.003 6.5E-08 60.2 9.5 138 190-334 4-154 (345)
91 PF04142 Nuc_sug_transp: Nucle 97.0 0.002 4.3E-08 58.9 7.1 78 260-338 17-94 (244)
92 KOG2922 Uncharacterized conser 96.9 0.00028 6E-09 65.1 0.8 128 187-339 15-142 (335)
93 PF07857 DUF1632: CEO family ( 96.9 0.0014 2.9E-08 59.8 4.7 134 194-340 1-141 (254)
94 PF00893 Multi_Drug_Res: Small 96.8 0.0022 4.7E-08 49.3 4.9 55 270-324 38-93 (93)
95 PF10639 UPF0546: Uncharacteri 96.8 0.014 3.1E-07 46.1 9.5 109 200-331 3-112 (113)
96 KOG1581 UDP-galactose transpor 96.7 0.023 4.9E-07 52.3 11.0 141 10-158 167-313 (327)
97 COG4975 GlcU Putative glucose 96.6 0.002 4.3E-08 57.2 3.7 135 194-339 3-142 (288)
98 COG3238 Uncharacterized protei 96.5 0.045 9.7E-07 45.5 10.9 136 13-156 3-144 (150)
99 PF00893 Multi_Drug_Res: Small 96.4 0.028 6.1E-07 43.1 8.4 57 86-148 35-92 (93)
100 KOG2234 Predicted UDP-galactos 96.2 0.14 2.9E-06 48.4 13.2 142 193-335 15-166 (345)
101 TIGR00803 nst UDP-galactose tr 95.9 0.026 5.7E-07 50.8 7.4 58 91-154 163-220 (222)
102 KOG1444 Nucleotide-sugar trans 95.3 0.18 3.8E-06 47.0 10.2 138 14-158 156-300 (314)
103 KOG4314 Predicted carbohydrate 93.9 0.049 1.1E-06 46.9 2.9 63 273-335 65-127 (290)
104 KOG1580 UDP-galactose transpor 93.4 0.77 1.7E-05 40.9 9.4 137 14-158 171-313 (337)
105 COG5070 VRG4 Nucleotide-sugar 93.3 0.49 1.1E-05 41.8 8.0 136 16-158 156-296 (309)
106 PF06379 RhaT: L-rhamnose-prot 92.4 0.55 1.2E-05 44.4 7.7 142 190-336 4-156 (344)
107 KOG4831 Unnamed protein [Funct 92.2 0.26 5.5E-06 37.8 4.2 112 18-157 6-124 (125)
108 KOG1443 Predicted integral mem 91.6 4 8.8E-05 38.0 12.0 137 13-156 162-313 (349)
109 KOG1582 UDP-galactose transpor 91.4 1.1 2.3E-05 40.9 7.9 138 14-158 189-332 (367)
110 PF03348 Serinc: Serine incorp 89.2 25 0.00054 35.0 22.5 59 267-338 250-308 (429)
111 KOG1442 GDP-fucose transporter 88.7 1.3 2.7E-05 40.6 6.2 141 13-160 183-329 (347)
112 KOG3912 Predicted integral mem 88.1 7.5 0.00016 35.8 10.6 140 12-157 173-333 (372)
113 PRK02237 hypothetical protein; 87.0 1.8 4E-05 33.6 5.3 46 290-335 62-107 (109)
114 PF07168 Ureide_permease: Urei 86.5 0.26 5.6E-06 45.5 0.6 130 199-332 2-145 (336)
115 PF05297 Herpes_LMP1: Herpesvi 84.1 0.32 6.9E-06 44.2 0.0 50 101-156 44-95 (381)
116 PF05977 MFS_3: Transmembrane 83.5 57 0.0012 33.5 21.2 29 190-219 253-281 (524)
117 PF02694 UPF0060: Uncharacteri 83.3 1.7 3.7E-05 33.6 3.7 46 291-336 61-106 (107)
118 PF06570 DUF1129: Protein of u 82.9 29 0.00063 30.7 12.1 86 21-110 91-176 (206)
119 KOG4831 Unnamed protein [Funct 80.9 6 0.00013 30.6 5.8 60 273-332 64-124 (125)
120 KOG2766 Predicted membrane pro 79.0 0.58 1.3E-05 42.2 -0.2 141 190-338 15-155 (336)
121 PF04342 DUF486: Protein of un 71.0 5.6 0.00012 30.8 3.3 31 302-332 77-107 (108)
122 COG1742 Uncharacterized conser 70.9 15 0.00032 28.4 5.5 47 290-336 61-107 (109)
123 PRK02237 hypothetical protein; 66.5 35 0.00075 26.7 6.8 47 106-158 58-105 (109)
124 KOG1583 UDP-N-acetylglucosamin 66.5 80 0.0017 29.3 10.2 139 9-158 158-314 (330)
125 TIGR02865 spore_II_E stage II 63.8 2.2E+02 0.0048 30.8 16.0 44 107-156 11-54 (764)
126 PF10225 DUF2215: Uncharacteri 63.5 77 0.0017 29.0 9.9 42 281-322 115-156 (249)
127 COG3169 Uncharacterized protei 61.6 13 0.00028 28.3 3.6 32 302-333 84-115 (116)
128 PRK06638 NADH:ubiquinone oxido 59.3 1.2E+02 0.0027 26.5 12.6 32 302-333 133-166 (198)
129 PF07168 Ureide_permease: Urei 56.7 4.9 0.00011 37.4 0.8 130 20-156 1-144 (336)
130 PF02694 UPF0060: Uncharacteri 53.3 14 0.00031 28.7 2.7 52 101-158 51-103 (107)
131 PF08507 COPI_assoc: COPI asso 46.1 24 0.00052 28.9 3.3 17 316-332 88-104 (136)
132 PF04342 DUF486: Protein of un 46.0 1.4E+02 0.003 23.3 7.0 31 118-154 74-104 (108)
133 PRK12650 putative monovalent c 45.2 4.8E+02 0.01 29.1 21.6 50 77-128 620-669 (962)
134 PF02487 CLN3: CLN3 protein; 43.8 2.3E+02 0.005 28.0 10.2 71 82-158 5-108 (402)
135 PF15102 TMEM154: TMEM154 prot 42.1 28 0.0006 28.8 3.0 24 318-341 66-89 (146)
136 TIGR03810 arg_ornith_anti argi 40.5 3.9E+02 0.0085 26.7 15.7 39 297-336 393-432 (468)
137 COG4858 Uncharacterized membra 39.5 2.6E+02 0.0056 24.3 10.9 112 16-135 101-219 (226)
138 KOG1623 Multitransmembrane pro 38.9 1.7E+02 0.0038 26.6 7.8 31 189-219 124-154 (243)
139 COG1742 Uncharacterized conser 37.9 78 0.0017 24.5 4.6 39 114-158 66-104 (109)
140 TIGR00939 2a57 Equilibrative N 35.6 2.5E+02 0.0055 28.0 9.3 15 317-331 178-192 (437)
141 KOG2568 Predicted membrane pro 33.4 5.4E+02 0.012 26.3 17.9 23 317-339 424-446 (518)
142 COG2245 Predicted membrane pro 32.3 2.7E+02 0.006 23.8 7.3 21 199-219 29-49 (182)
143 TIGR01299 synapt_SV2 synaptic 31.8 6.9E+02 0.015 27.0 12.5 20 114-133 340-359 (742)
144 COG3086 RseC Positive regulato 31.5 13 0.00029 30.5 -0.4 27 283-309 70-96 (150)
145 PF15345 TMEM51: Transmembrane 31.5 22 0.00049 31.7 0.9 25 319-343 67-91 (233)
146 PF15471 TMEM171: Transmembran 31.1 47 0.001 30.3 2.9 19 315-333 161-179 (319)
147 PLN00028 nitrate transmembrane 31.1 3.2E+02 0.0069 27.4 9.4 14 317-330 416-429 (476)
148 PF14851 FAM176: FAM176 family 29.6 71 0.0015 26.8 3.5 28 275-302 7-34 (153)
149 PTZ00359 hypothetical protein; 28.9 3.7E+02 0.0079 26.5 8.5 20 192-211 226-245 (443)
150 PF10101 DUF2339: Predicted me 28.6 7.5E+02 0.016 26.4 27.2 92 32-130 20-114 (745)
151 COG2271 UhpC Sugar phosphate p 28.5 3.7E+02 0.008 26.9 8.7 134 193-339 66-211 (448)
152 PRK10489 enterobactin exporter 28.1 5.6E+02 0.012 24.8 11.3 17 317-333 382-398 (417)
153 PF11044 TMEMspv1-c74-12: Plec 28.1 15 0.00033 23.4 -0.5 18 313-330 2-19 (49)
154 PF06609 TRI12: Fungal trichot 27.9 7.3E+02 0.016 26.1 20.1 15 143-157 384-398 (599)
155 PF11361 DUF3159: Protein of u 27.5 3E+02 0.0064 24.0 7.2 71 109-211 29-99 (187)
156 COG2323 Predicted membrane pro 26.8 4.7E+02 0.01 23.5 9.4 81 44-130 3-83 (224)
157 PRK11902 ampG muropeptide tran 26.7 5.8E+02 0.013 24.5 12.7 17 315-331 370-386 (402)
158 COG4657 RnfA Predicted NADH:ub 26.6 4E+02 0.0086 22.6 9.9 53 189-241 128-184 (193)
159 PF06123 CreD: Inner membrane 26.5 6.6E+02 0.014 25.1 13.2 29 191-219 349-377 (430)
160 COG0474 MgtA Cation transport 26.5 7.9E+02 0.017 27.3 11.9 89 10-99 698-800 (917)
161 PF09656 PGPGW: Putative trans 25.9 2.1E+02 0.0046 19.2 4.8 45 142-218 5-49 (53)
162 PF08693 SKG6: Transmembrane a 25.8 48 0.001 20.9 1.4 18 319-336 21-38 (40)
163 PF06123 CreD: Inner membrane 25.4 6.9E+02 0.015 25.0 10.6 47 192-243 299-345 (430)
164 PF06570 DUF1129: Protein of u 25.0 4.7E+02 0.01 22.9 11.1 14 143-156 89-102 (206)
165 PRK05122 major facilitator sup 24.9 6.1E+02 0.013 24.2 11.9 17 316-332 370-386 (399)
166 KOG3762 Predicted transporter 24.7 99 0.0022 31.8 4.2 21 318-338 533-553 (618)
167 PF15108 TMEM37: Voltage-depen 24.6 3.7E+02 0.008 22.6 6.7 82 142-243 91-173 (184)
168 PF12292 DUF3624: Protein of u 24.5 2.7E+02 0.0059 20.3 5.2 45 19-64 25-69 (77)
169 COG4237 HyfE Hydrogenase 4 mem 23.8 5E+02 0.011 22.8 11.3 66 96-162 51-116 (218)
170 PF08374 Protocadherin: Protoc 23.5 89 0.0019 27.7 3.2 6 404-409 166-171 (221)
171 TIGR00905 2A0302 transporter, 23.1 7.7E+02 0.017 24.7 15.7 43 293-336 394-437 (473)
172 PRK13108 prolipoprotein diacyl 21.8 8.4E+02 0.018 24.6 21.6 24 313-336 254-277 (460)
173 PRK12585 putative monovalent c 21.6 5.5E+02 0.012 22.4 7.6 18 190-207 43-60 (197)
174 COG0670 Integral membrane prot 21.5 6.1E+02 0.013 22.9 21.5 113 74-218 83-196 (233)
175 PRK14778 lipoprotein signal pe 21.2 97 0.0021 27.0 3.0 11 318-328 124-134 (186)
176 COG1480 Predicted membrane-ass 20.9 1E+03 0.022 25.3 19.4 23 40-62 270-292 (700)
177 TIGR01167 LPXTG_anchor LPXTG-m 20.2 89 0.0019 18.3 1.9 17 314-330 11-27 (34)
178 PF07444 Ycf66_N: Ycf66 protei 20.0 36 0.00077 25.4 0.1 27 312-338 4-30 (84)
179 COG1575 MenA 1,4-dihydroxy-2-n 20.0 7.5E+02 0.016 23.4 14.4 34 245-278 137-170 (303)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=293.83 Aligned_cols=321 Identities=28% Similarity=0.603 Sum_probs=251.3
Q ss_pred chhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhh-ccCCCCCHHHHHHHHHHHHH
Q 015299 10 FLETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLER-KAQPKITFKVFMQIFVLALL 88 (409)
Q Consensus 10 ~~~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 88 (409)
+.|+.+.++.|+...+.++...++.|.+++.+++|..+.++|+.++.++++++++++++ +.+++.+++++..+.+.|++
T Consensus 8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~ 87 (358)
T PLN00411 8 WRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL 87 (358)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 45577999999999999999999999999999999999999999999999999877554 33344568889999999999
Q ss_pred HHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHh------hhhcccccccccchhhhHHHHHHHHHHHHHhcCC
Q 015299 89 GPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICR------MEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGP 162 (409)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l------~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~ 162 (409)
+ ++++.+++++++|++++.++++.++.|+++.+++++++ +||++++ +++|++++++|+.++...+++
T Consensus 88 g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~ 160 (358)
T PLN00411 88 G-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGP 160 (358)
T ss_pred H-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCc
Confidence 8 78888999999999999999999999999999999994 7777777 899999999999998854443
Q ss_pred ccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHH
Q 015299 163 IVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVT 242 (409)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 242 (409)
.... ++++...+ .............+..+|++++++++++||+|++.+|+..+++ ++....+++++.++.+...+..
T Consensus 161 ~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~-~~~~~~t~~~~~~~~~~~~~~~ 237 (358)
T PLN00411 161 RVFV-ASSPPYLN-FRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY-PAAFTVSFLYTVCVSIVTSMIG 237 (358)
T ss_pred cccc-cccccccc-ccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHhHHHHHHHHHHHHHHHHHH
Confidence 2100 00000000 0000000011223446799999999999999999999998887 3444666777777777666666
Q ss_pred HHhcCC-CcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhH
Q 015299 243 FVIEHK-PSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGA 321 (409)
Q Consensus 243 ~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~ 321 (409)
...+.. ...|..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+
T Consensus 238 l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~ 316 (358)
T PLN00411 238 LVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGG 316 (358)
T ss_pred HHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 655432 233332223344567777775 568999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhheeeecccccccc
Q 015299 322 ILIVVGLYSVLWGKHKEKME 341 (409)
Q Consensus 322 ~li~~g~~l~~~~~~~~~~~ 341 (409)
++|+.|+++..+.+++|.+.
T Consensus 317 ~LIl~Gv~l~~~~~~~~~~~ 336 (358)
T PLN00411 317 ILITLGFYAVMWGKANEEKD 336 (358)
T ss_pred HHHHHHHHHHHhhhhhhhhh
Confidence 99999999988766555433
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=3.7e-31 Score=249.39 Aligned_cols=280 Identities=14% Similarity=0.194 Sum_probs=231.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHH
Q 015299 15 KPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQ 94 (409)
Q Consensus 15 ~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (409)
.-.+..+...++||.++++.|... ++++|.+++++|+.++.++++++...++++ ..+++++......|.++...++
T Consensus 8 ~~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 8 PLFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHHHHHHHHH
Confidence 445677888999999999999985 799999999999999999998887653322 2346788888888888767788
Q ss_pred HHHHhhh-cccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCC
Q 015299 95 NFYYAGL-KFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAH 173 (409)
Q Consensus 95 ~~~~~al-~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~ 173 (409)
.+++++. ++++++.++++.++.|+++.+++++ +|||++++ +++|++++++|+.++.. ++ .
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~~-~---------- 144 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-GG-N---------- 144 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-Cc-c----------
Confidence 8889999 9999999999999999999999986 69999999 79999999999988762 11 0
Q ss_pred CCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 015299 174 PHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQ 253 (409)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 253 (409)
.+....|++++++++++||.|.+..|+..++ ++...+.++..++++.+.+.....+.... .
T Consensus 145 --------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 205 (292)
T PRK11272 145 --------------LSGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT--A 205 (292)
T ss_pred --------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc--c
Confidence 1123579999999999999999999986543 44556677778888877776653322111 1
Q ss_pred cccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeee
Q 015299 254 IGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 254 ~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 333 (409)
..+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+
T Consensus 206 ~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 206 LPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 12334688899999999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred ccc
Q 015299 334 GKH 336 (409)
Q Consensus 334 ~~~ 336 (409)
.++
T Consensus 286 ~~~ 288 (292)
T PRK11272 286 GKY 288 (292)
T ss_pred HHh
Confidence 443
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=1.1e-30 Score=246.92 Aligned_cols=281 Identities=16% Similarity=0.263 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015299 16 PYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQN 95 (409)
Q Consensus 16 g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (409)
..++++++.++||.++++.|... ++++|..+.++|+.++++.++++.. + ++.+++ .....|++.......
T Consensus 5 ~~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~~---~---~~~~~~---~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 5 DGVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFVA---R---PKVPLN---LLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHhc---C---CCCchH---HHHHHHHHHHHHHHH
Confidence 34668899999999999999986 7899999999999998776665442 1 112222 344455555355666
Q ss_pred HHHhhhcc-cCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCC
Q 015299 96 FYYAGLKF-TSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHP 174 (409)
Q Consensus 96 ~~~~al~~-~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~ 174 (409)
+++.++++ .+++.++++.++.|+++.+++++++|||++++ ++++++++++|+.++.. + ..
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~-~-~~----------- 135 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE-D-SL----------- 135 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc-c-cC-----------
Confidence 77889988 58899999999999999999999999999999 79999999999998872 1 00
Q ss_pred CCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhC-CCchhHHHHHHHHHHHHHHHHHHHhcCCC---c
Q 015299 175 HDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYK-NHQLSLTSLMCFVGTLQAIAVTFVIEHKP---S 250 (409)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~ 250 (409)
........|++++++++++|++|.++.|+..++.+ +.......+.+..+.+.........+... .
T Consensus 136 -----------~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (299)
T PRK11453 136 -----------NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIH 204 (299)
T ss_pred -----------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhh
Confidence 01122357999999999999999999999876541 12223344444444443333333233221 1
Q ss_pred ccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhhe
Q 015299 251 VWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYS 330 (409)
Q Consensus 251 ~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l 330 (409)
.+...+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++
T Consensus 205 ~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l 284 (299)
T PRK11453 205 SLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYI 284 (299)
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH
Confidence 11122334688999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eeeccc
Q 015299 331 VLWGKH 336 (409)
Q Consensus 331 ~~~~~~ 336 (409)
..+.++
T Consensus 285 ~~~~~~ 290 (299)
T PRK11453 285 NVFGLR 290 (299)
T ss_pred Hhcchh
Confidence 776654
No 4
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.98 E-value=7.4e-31 Score=247.71 Aligned_cols=281 Identities=10% Similarity=0.012 Sum_probs=209.1
Q ss_pred cchhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccC--CC-CCHHHHHHHHHH
Q 015299 9 NFLETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQ--PK-ITFKVFMQIFVL 85 (409)
Q Consensus 9 ~~~~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~--~~-~~~~~~~~~~~~ 85 (409)
+|+++.+|.++++++.++||.++++.|.. .+++|.+++++|+.++.+++.+++..+++... .+ .+++.+.. ...
T Consensus 2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 78 (296)
T PRK15430 2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAV 78 (296)
T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHH
Confidence 46677899999999999999999999986 57999999999999999888877654322110 00 13344433 345
Q ss_pred HHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccc
Q 015299 86 ALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVE 165 (409)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~ 165 (409)
+.++.++++.++++|++++++++++++.++.|+++.+++++++|||++++ +++|++++++|++++...++
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~~---- 148 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTFG---- 148 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHcC----
Confidence 66666889999999999999999999999999999999999999999999 79999999999999873110
Q ss_pred cccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHh
Q 015299 166 LFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVI 245 (409)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 245 (409)
+ . ..++++++++||.|.+..|+..++...+....+.+...++.+...+. .
T Consensus 149 ----------------------~-~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 198 (296)
T PRK15430 149 ----------------------S-L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---A 198 (296)
T ss_pred ----------------------C-c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---c
Confidence 0 0 14688899999999999888643220112222333333333322211 1
Q ss_pred cCCCcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHH
Q 015299 246 EHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIV 325 (409)
Q Consensus 246 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~ 325 (409)
......+...+...+..+++.++ .+.++|.++++++++.++++++++.+++|+++.+++++++||+|++.+++|+++|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~ 277 (296)
T PRK15430 199 DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIW 277 (296)
T ss_pred cCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 11111111111112233344454 57799999999999999999999999999999999999999999999999999998
Q ss_pred hhhheeee
Q 015299 326 VGLYSVLW 333 (409)
Q Consensus 326 ~g~~l~~~ 333 (409)
+|+.++..
T Consensus 278 ~~~~v~~~ 285 (296)
T PRK15430 278 VALAIFVM 285 (296)
T ss_pred HHHHHHHH
Confidence 88766653
No 5
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.98 E-value=2e-30 Score=240.69 Aligned_cols=259 Identities=16% Similarity=0.258 Sum_probs=220.4
Q ss_pred HHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCc
Q 015299 27 YAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSP 106 (409)
Q Consensus 27 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 106 (409)
||.++++.|..++...++....+.|+..+.+++.++...+ .+++++.+....|.++.++++.++++|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8899999999876679999999999999988888765432 235677788888888889999999999999999
Q ss_pred hhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCC
Q 015299 107 TFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTAS 186 (409)
Q Consensus 107 ~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
++++++.++.|+++.+++++++|||++++ +++|+.++++|++++.. ++
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~------------------------- 121 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG------------------------- 121 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-------------------------
Confidence 99999999999999999999999999999 79999999999999862 21
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHH
Q 015299 187 SEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYA 266 (409)
Q Consensus 187 ~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 266 (409)
..+....|++++++++++|+.+.+..|+..++.++++.....+.+.++.+.+.+.....+.. . .. +...|..+++.
T Consensus 122 ~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~--~~-~~~~~~~~~~~ 197 (260)
T TIGR00950 122 NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-P--QA-LSLQWGALLYL 197 (260)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-C--Cc-chHHHHHHHHH
Confidence 11234689999999999999999999998877722344555567888888888877643322 1 11 33467778889
Q ss_pred HHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhh
Q 015299 267 GIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGL 328 (409)
Q Consensus 267 g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~ 328 (409)
+++++.++|.++++++++.++.+++.+.+++|+++++++++++||+++..+++|+++++.|+
T Consensus 198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.98 E-value=2.4e-30 Score=243.89 Aligned_cols=276 Identities=11% Similarity=0.059 Sum_probs=222.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVI 92 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (409)
+.+++++++++.++|+.++.+.|+++ ++++|.++.++|++++.++++++... ++ .+.++++++..+..|.+. +.
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~~~~-~~---~~~~~~~~~~~~~~g~~~-~~ 83 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAIFKP-WR---LRFAKEQRLPLLFYGVSL-GG 83 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHHHhH-Hh---ccCCHHHHHHHHHHHHHH-HH
Confidence 46899999999999999999999996 67999999999999999888876532 11 134567888888888886 88
Q ss_pred HHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCC
Q 015299 93 DQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHA 172 (409)
Q Consensus 93 ~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~ 172 (409)
.+.+++++++++|++.++++.++.|+++.+++. |+.. +..++.++++|+.++.. .+.+
T Consensus 84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~-~~~~--------- 141 (293)
T PRK10532 84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLP-LGQD--------- 141 (293)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeee-cCCC---------
Confidence 888999999999999999999999999998873 4433 24566788999988762 1111
Q ss_pred CCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 015299 173 HPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVW 252 (409)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (409)
.......|++++++++++|+.|.+..|+..++. ++... .+...++++.+.++....+. ..
T Consensus 142 --------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~---~~ 201 (293)
T PRK10532 142 --------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAG---EA 201 (293)
T ss_pred --------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccC---cc
Confidence 112235799999999999999999999987776 66655 45566677777766653221 11
Q ss_pred ccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheee
Q 015299 253 QIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 253 ~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
. .+...|..++++|++++.++|.++++++++.++++++++.+++|+++.+++++++||++++.+++|+++|++|++...
T Consensus 202 ~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 202 L-WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred c-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 1 122345567899999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred ecccc
Q 015299 333 WGKHK 337 (409)
Q Consensus 333 ~~~~~ 337 (409)
+..++
T Consensus 281 ~~~~~ 285 (293)
T PRK10532 281 LTIRR 285 (293)
T ss_pred hcCCC
Confidence 65443
No 7
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.97 E-value=1.5e-30 Score=245.53 Aligned_cols=284 Identities=11% Similarity=0.067 Sum_probs=214.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVI 92 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (409)
+.+++++++++.++||.+++..|... ++++|..+.++|+.++.++++++.. ++ +.+ +.+++..+.+.++.++
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~~---~~---~~~-~~~~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTVG---FP---RLR-QFPKRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHcc---cc---ccc-cccHHHHHHHhHHHHH
Confidence 45788999999999999999999995 8899999999999999988886531 11 111 1222334455555577
Q ss_pred HHHHHHhhhcc----cCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCcccccc
Q 015299 93 DQNFYYAGLKF----TSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFW 168 (409)
Q Consensus 93 ~~~~~~~al~~----~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~ 168 (409)
+..+++.++++ ++++.++++.++.|+++.+++++++|||++++ +++|++++++|++++.. +++..+.
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~-~~~~~~~-- 144 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLG-GDNGLSL-- 144 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheec-CCccchh--
Confidence 77777777754 57788899999999999999999999999999 79999999999999873 2110000
Q ss_pred ccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCC
Q 015299 169 TQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHK 248 (409)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (409)
.+ ...+......|++++++++++||+|.++.|+..++. ++..... ..+.+.+.+... .++.
T Consensus 145 -----------~~--~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~~~~~~---~~~~~~l~~~~~-~~~~ 205 (295)
T PRK11689 145 -----------AE--LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK--NGITLFF---ILTALALWIKYF-LSPQ 205 (295)
T ss_pred -----------hh--hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC--CchhHHH---HHHHHHHHHHHH-HhcC
Confidence 00 000111235699999999999999999999987666 6654422 223333333233 2221
Q ss_pred CcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhh
Q 015299 249 PSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGL 328 (409)
Q Consensus 249 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~ 328 (409)
..... +...|..+++.++ +++++|.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+
T Consensus 206 -~~~~~-~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv 282 (295)
T PRK11689 206 -PAMVF-SLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGS 282 (295)
T ss_pred -ccccC-CHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhH
Confidence 11122 2236777777774 78999999999999999999999999999999999999999999999999999999998
Q ss_pred heeeecc
Q 015299 329 YSVLWGK 335 (409)
Q Consensus 329 ~l~~~~~ 335 (409)
++..+..
T Consensus 283 ~~~~~~~ 289 (295)
T PRK11689 283 LLCWLAT 289 (295)
T ss_pred HHHhhhH
Confidence 8876544
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=1.2e-29 Score=240.50 Aligned_cols=284 Identities=13% Similarity=0.115 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015299 18 FAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFY 97 (409)
Q Consensus 18 l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (409)
++.+....+-....+..|.+++....|..++++|+.++.+.+.+... ...+.+++.+++++++++..|+++ +++..+.
T Consensus 5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 82 (302)
T TIGR00817 5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTS 82 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHH
Confidence 44555566666667789999844477999999999998877665521 122333456789999999999997 8999999
Q ss_pred HhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCC
Q 015299 98 YAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDK 177 (409)
Q Consensus 98 ~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 177 (409)
++|+++++++.++++.++.|+++++++++++|||++++ ++++++++++|+.+... +
T Consensus 83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~-~----------------- 138 (302)
T TIGR00817 83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD-T----------------- 138 (302)
T ss_pred HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC-C-----------------
Confidence 99999999999999999999999999999999999999 79999999999987541 1
Q ss_pred CCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh--hhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc---c
Q 015299 178 SDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALE--TYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSV---W 252 (409)
Q Consensus 178 ~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~ 252 (409)
+.+....|++++++++++|++|.+..|+..+ +. ++...+.+++..+++.++|.....+..... +
T Consensus 139 ---------~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~--~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 207 (302)
T TIGR00817 139 ---------ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL--DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGF 207 (302)
T ss_pred ---------cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC--CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHH
Confidence 1122367999999999999999999999887 55 999999999999999999988755431110 0
Q ss_pred cc-----ccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhh
Q 015299 253 QI-----GWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVG 327 (409)
Q Consensus 253 ~~-----~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g 327 (409)
.. .....+...+..+..+....+.+++.++++++|++.+++.+++|+++++++++++||+++..+++|+++++.|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~G 287 (302)
T TIGR00817 208 MQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAG 287 (302)
T ss_pred HHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHH
Confidence 00 0011122122333323333345666899999999999999999999999999999999999999999999999
Q ss_pred hheeeeccccc
Q 015299 328 LYSVLWGKHKE 338 (409)
Q Consensus 328 ~~l~~~~~~~~ 338 (409)
++++.+.|.++
T Consensus 288 v~l~~~~k~~~ 298 (302)
T TIGR00817 288 VFLYSRVKAQK 298 (302)
T ss_pred HHHHHHHhccC
Confidence 99998665433
No 9
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.97 E-value=9.1e-28 Score=225.34 Aligned_cols=300 Identities=14% Similarity=0.170 Sum_probs=238.6
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHH
Q 015299 12 ETSKPYFAMISLQFGYAGMNIITKVSLNRGMS-HYVLVVYRHAFATAVIAPFAFFLERK-AQPKITFKVFMQIFVLALLG 89 (409)
Q Consensus 12 ~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~a~i~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 89 (409)
+..+.+++.=..+++-..++..+..+.+++.+ |....++-++.-.++..++..+++++ .+.+..+++|+++++.+++-
T Consensus 10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D 89 (334)
T PF06027_consen 10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD 89 (334)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH
Confidence 33455666666677778888888877545555 77777888877777777766664432 22333457788889999998
Q ss_pred HHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccc
Q 015299 90 PVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWT 169 (409)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~ 169 (409)
+.++.+.+.|++|++++.++++.++..+++++++++++|+|+++. +++|++++++|++++...+...
T Consensus 90 -v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~------ 156 (334)
T PF06027_consen 90 -VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLS------ 156 (334)
T ss_pred -HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccc------
Confidence 899999999999999999999999999999999999999999999 7999999999999987533111
Q ss_pred cCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 015299 170 QHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKP 249 (409)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (409)
++.+.+.++..+|++++++++++||+++++.++..|+. +..+..++..+++.+++.+...++|.+.
T Consensus 157 ------------~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~ile~~~ 222 (334)
T PF06027_consen 157 ------------GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAILERSG 222 (334)
T ss_pred ------------cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHheehhh
Confidence 01112445678999999999999999999999999998 8899999999999999998888777642
Q ss_pred c-ccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhh
Q 015299 250 S-VWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGL 328 (409)
Q Consensus 250 ~-~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~ 328 (409)
. ...+.+ .....+....++.++.|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|+
T Consensus 223 i~~~~w~~--~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~ 300 (334)
T PF06027_consen 223 IESIHWTS--QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGF 300 (334)
T ss_pred hhccCCCh--hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHh
Confidence 2 222222 2223333334466777888889999999999999999999999999999999999999999999999999
Q ss_pred heeeeccccccc
Q 015299 329 YSVLWGKHKEKM 340 (409)
Q Consensus 329 ~l~~~~~~~~~~ 340 (409)
++++..++++++
T Consensus 301 vvy~~~~~~~~~ 312 (334)
T PF06027_consen 301 VVYNLAESPEEE 312 (334)
T ss_pred heEEccCCcccc
Confidence 999987655443
No 10
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=4.4e-27 Score=220.51 Aligned_cols=275 Identities=12% Similarity=0.153 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhh-hccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015299 17 YFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLE-RKAQPKITFKVFMQIFVLALLGPVIDQN 95 (409)
Q Consensus 17 ~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (409)
+++.++++++|+..++..|... +.-++ +.+++.....+++.|+...+. ++.++..+++ ++...+.+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHH
Confidence 5778999999999999999663 44344 347777777778877776532 2233333334 44444555555589999
Q ss_pred HHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCC
Q 015299 96 FYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPH 175 (409)
Q Consensus 96 ~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~ 175 (409)
++++++++.+++.++++.++.|+++.+++++++|||++++ +++|+.++++|+.++...+ .
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~~--~------------ 138 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLSR--F------------ 138 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhccc--c------------
Confidence 9999999999999999999999999999999999999999 7999999999999887311 0
Q ss_pred CCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHH-HHHHHHhc-CCCcccc
Q 015299 176 DKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQA-IAVTFVIE-HKPSVWQ 253 (409)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~~ 253 (409)
......|+.++++++++|++|.+..|+..++. ++..........+.+.. .+...... .+...+.
T Consensus 139 ------------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (281)
T TIGR03340 139 ------------AQHRRKAYAWALAAALGTAIYSLSDKAAALGV--PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF 204 (281)
T ss_pred ------------cccchhHHHHHHHHHHHHHHhhhhccccccch--hcccccHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 01124688899999999999999988765444 33221111111222111 22222110 1111111
Q ss_pred cccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhhe
Q 015299 254 IGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYS 330 (409)
Q Consensus 254 ~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l 330 (409)
.....++.+++.+.+++.++|.++++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|+++
T Consensus 205 -~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 205 -PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 1222456677888888999999999999999999999999999999999999999999999999999999999875
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=6.6e-27 Score=225.12 Aligned_cols=285 Identities=12% Similarity=0.119 Sum_probs=226.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhccCCCC--CHHHHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNRGMS-HYVLVVYRHAFATAVIAPFAFFLERKAQPKI--TFKVFMQIFVLALLG 89 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 89 (409)
+.+..++.+....+-.......|.++ +.++ |+.++++|++++++++..++... .+.+++. .+++++.++..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 56777888888888888899999997 6689 99999999999988766554322 2222333 245788899999998
Q ss_pred HHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccc
Q 015299 90 PVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWT 169 (409)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~ 169 (409)
. ..+...+.|+++++++.++++.++.|+++++++++++|||++++ ++++++++++|+.+... +
T Consensus 125 ~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~-~--------- 187 (350)
T PTZ00343 125 L-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV-K--------- 187 (350)
T ss_pred H-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec-c---------
Confidence 4 44666779999999999999999999999999999999999999 79999999999999872 1
Q ss_pred cCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhC-----CCchhHHHHHHHHHHHHHHHHHHH
Q 015299 170 QHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYK-----NHQLSLTSLMCFVGTLQAIAVTFV 244 (409)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~ 244 (409)
+.+....|++++++++++++++++..|+..++.+ .++.....++...+.++++|+...
T Consensus 188 -----------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~ 250 (350)
T PTZ00343 188 -----------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLF 250 (350)
T ss_pred -----------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123468999999999999999999999887641 245556666788999999998775
Q ss_pred hcCCC--cccc----cccchhHHHHHHHHHHHhHHHHHHHH----HHHhhcCceEeeechhhHHHHHHHHHHHHhccccc
Q 015299 245 IEHKP--SVWQ----IGWDMNLLAAAYAGIVTSSISYFVQG----LVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIY 314 (409)
Q Consensus 245 ~~~~~--~~~~----~~~~~~~~~l~~~g~~~~~~~~~l~~----~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~ 314 (409)
.|... ..+. ......+..+++ .++.+++++++++ +++++++|.+.++..+++|+++++++++++||+++
T Consensus 251 ~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt 329 (350)
T PTZ00343 251 FEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVT 329 (350)
T ss_pred HhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCc
Confidence 54321 1110 000112233344 3445678888888 49999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHhhhheeeec
Q 015299 315 LGSVLGAILIVVGLYSVLWG 334 (409)
Q Consensus 315 ~~~~iG~~li~~g~~l~~~~ 334 (409)
+.+++|++++++|++++++.
T Consensus 330 ~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 330 LLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred hHhHHHHHHHHHHHHHHhhc
Confidence 99999999999999998765
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.94 E-value=2.8e-25 Score=205.59 Aligned_cols=248 Identities=11% Similarity=0.063 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc-----cCCCCCHHH-HHHHHHHHHH
Q 015299 15 KPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERK-----AQPKITFKV-FMQIFVLALL 88 (409)
Q Consensus 15 ~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~ 88 (409)
+|+++++++.++||.++++.|.. .+++|.+++++|++++++++.++...++++ ..++.++++ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 58999999999999999999995 469999999999999998887766443221 111122233 4456667777
Q ss_pred HHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCcccccc
Q 015299 89 GPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFW 168 (409)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~ 168 (409)
. ++++.++++|++++++++++++.++.|+++++++++++|||++++ ++++++++++|++++...++
T Consensus 80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence 5 899999999999999999999999999999999999999999999 79999999999998863110
Q ss_pred ccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCC
Q 015299 169 TQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHK 248 (409)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (409)
+ . ..++++++++|+.|.+..|+..++ +....... .........+... ....
T Consensus 146 ------------------~--~----~~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~-~~~~ 196 (256)
T TIGR00688 146 ------------------S--L----PWEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLL-QTDF 196 (256)
T ss_pred ------------------C--c----hHHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHH-Hhcc
Confidence 0 0 135788999999999999886543 32222211 1111112221111 1111
Q ss_pred CcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHH
Q 015299 249 PSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFI 308 (409)
Q Consensus 249 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~ 308 (409)
.......+...|..+++.|++ +.++|.++++++++.++++++++.|++|+++.++++++
T Consensus 197 ~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 197 ATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred CcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 111111222367778888876 78999999999999999999999999999999999865
No 13
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.94 E-value=8e-29 Score=216.16 Aligned_cols=294 Identities=13% Similarity=0.105 Sum_probs=232.0
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHH
Q 015299 12 ETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPV 91 (409)
Q Consensus 12 ~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (409)
+..+|+++...+.++...+.+..|.. +.+|.+..-.|+++-.++..|...+.+..... +...+.+++++|+.| +
T Consensus 35 ~p~~gl~l~~vs~ff~~~~vv~t~~~---e~~p~e~a~~r~l~~mlit~pcliy~~~~v~g--p~g~R~~LiLRg~mG-~ 108 (346)
T KOG4510|consen 35 KPNLGLLLLTVSYFFNSCMVVSTKVL---ENDPMELASFRLLVRMLITYPCLIYYMQPVIG--PEGKRKWLILRGFMG-F 108 (346)
T ss_pred CCccCceehhhHHHHhhHHHhhhhhh---ccChhHhhhhhhhhehhhhheEEEEEeeeeec--CCCcEEEEEeehhhh-h
Confidence 55678888888866555565555555 58899999999888887777766553332211 234456678999998 7
Q ss_pred HHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccC
Q 015299 92 IDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQH 171 (409)
Q Consensus 92 ~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~ 171 (409)
.+..+.|||++|++.+++++|.+++|+||.+++|.++|||+++. ..++..+.+.||++++ .|++-+..+..
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv---RPpFlFG~~t~ 179 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV---RPPFLFGDTTE 179 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe---cCCcccCCCcc
Confidence 77778888999999999999999999999999999999999999 5999999999999998 34433221111
Q ss_pred CCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 015299 172 AHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSV 251 (409)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (409)
+.+.+.......|...++.++++-|...++.|++.|+. |....+.|...++.+..++.....+ .
T Consensus 180 ----------g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~--h~~msvsyf~~i~lV~s~I~~~~ig----~ 243 (346)
T KOG4510|consen 180 ----------GEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA--HAIMSVSYFSLITLVVSLIGCASIG----A 243 (346)
T ss_pred ----------ccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc--cEEEEehHHHHHHHHHHHHHHhhcc----c
Confidence 11112234456788999999999999999999998988 9888888988888888877665333 2
Q ss_pred ccccc-chhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhhe
Q 015299 252 WQIGW-DMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYS 330 (409)
Q Consensus 252 ~~~~~-~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l 330 (409)
+.++. ..+|+.++.+|++ +++++++.+.++|+..+..+++..+.+.+++.++++++|+|.||++.|.|+++|+.+.+.
T Consensus 244 ~~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~ 322 (346)
T KOG4510|consen 244 VQLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW 322 (346)
T ss_pred eecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence 33332 2367777888986 589999999999999999999999999999999999999999999999999999998887
Q ss_pred eeecccc
Q 015299 331 VLWGKHK 337 (409)
Q Consensus 331 ~~~~~~~ 337 (409)
....|..
T Consensus 323 ~a~~kwa 329 (346)
T KOG4510|consen 323 VALKKWA 329 (346)
T ss_pred HHHHHHh
Confidence 7655443
No 14
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=3.7e-23 Score=194.56 Aligned_cols=282 Identities=20% Similarity=0.320 Sum_probs=217.0
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCC-CChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHH
Q 015299 12 ETSKPYFAMISLQFGYAGMNIITKVSLNRG-MSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGP 90 (409)
Q Consensus 12 ~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 90 (409)
+...+....++..+.|+.+....|... ++ .++....+.|...+.+...+.........++. .+.+.+..+.+.++.
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 80 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPA--LRPWLLLLLLALLGL 80 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHHhhccccccc--ccchHHHHHHHHHHH
Confidence 456788888888999999999999995 54 67777777799998888444332211111111 122455666666666
Q ss_pred HHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHH-HHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccc
Q 015299 91 VIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAV-ICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWT 169 (409)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~-l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~ 169 (409)
..+..+++.++++++++.++++.++.|+++.++++ ++++||++++ ++.++.+.++|++++...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~------ 148 (292)
T COG0697 81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG------ 148 (292)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc------
Confidence 99999999999999999999999999999999997 6679999999 6999999999999998322110
Q ss_pred cCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHH-HHHHHHHHHHHHHHHHhcCC
Q 015299 170 QHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTS-LMCFVGTLQAIAVTFVIEHK 248 (409)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~ 248 (409)
... ...|+.++++++++++++.+..|+.. +. ++..... +..........+... ..
T Consensus 149 -----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~--~~- 204 (292)
T COG0697 149 -----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RL--GPVTLALLLQLLLALLLLLLFFL--SG- 204 (292)
T ss_pred -----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC--ChHHHHHHHHHHHHHHHHHHHHh--cc-
Confidence 001 57999999999999999999999987 54 5555555 333311112222221 11
Q ss_pred CcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhh
Q 015299 249 PSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGL 328 (409)
Q Consensus 249 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~ 328 (409)
.. .......+..+.+.|++++.+++.++++++++.++..++.+.+++|+++.++++++++|+++..+++|+++++.|+
T Consensus 205 ~~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~ 282 (292)
T COG0697 205 FG--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGV 282 (292)
T ss_pred cc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 11 1122236788888999888899999999999999999999999999999999999999999999999999999999
Q ss_pred heeeec
Q 015299 329 YSVLWG 334 (409)
Q Consensus 329 ~l~~~~ 334 (409)
.+....
T Consensus 283 ~l~~~~ 288 (292)
T COG0697 283 LLASLR 288 (292)
T ss_pred HHHhcc
Confidence 888765
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.92 E-value=4.1e-23 Score=179.54 Aligned_cols=275 Identities=13% Similarity=0.090 Sum_probs=229.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015299 16 PYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQN 95 (409)
Q Consensus 16 g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (409)
+++.++.+.+..=....+.|.++ ..+++...+.+|..++.++++++.+-.+ .++++++|+.+...|+.- ...|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l~RPwr----~r~~~~~~~~~~~yGvsL-g~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLALFRPWR----RRLSKPQRLALLAYGVSL-GGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHHhhHHH----hccChhhhHHHHHHHHHH-HHHHH
Confidence 57777777777777788889997 8899999999999999999988764322 356788999999999997 89999
Q ss_pred HHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCC
Q 015299 96 FYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPH 175 (409)
Q Consensus 96 ~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~ 175 (409)
+||.+++.+|.+.+..+.++.|+...+++.--.+ +.+.+.+++.|+.++.- .+.
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr~~------------d~vwvaLAvlGi~lL~p-~~~------------- 140 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSSRRLR------------DFVWVALAVLGIWLLLP-LGQ------------- 140 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhccchh------------hHHHHHHHHHHHHhhee-ccC-------------
Confidence 9999999999999999999999988877654443 48888889999999872 211
Q ss_pred CCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 015299 176 DKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIG 255 (409)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 255 (409)
.....+..|..+++.++.+|++|.+..+|..+.. +...-+..-+.++.++.+|+...... .. +.
T Consensus 141 ----------~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~g~~g~a~gm~vAaviv~Pig~~~ag--~~--l~ 204 (292)
T COG5006 141 ----------SVWSLDPVGVALALGAGACWALYIVLGQRAGRAE--HGTAGVAVGMLVAALIVLPIGAAQAG--PA--LF 204 (292)
T ss_pred ----------CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC--CCchHHHHHHHHHHHHHhhhhhhhcc--hh--hc
Confidence 1344568999999999999999999999988755 77788888899999999999873322 11 11
Q ss_pred cchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecc
Q 015299 256 WDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGK 335 (409)
Q Consensus 256 ~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 335 (409)
.+.-...-+..+++++.+.|.+-..++++.++.+.+++..++|.++.+.|++++||.+|+.||+|++.|+.+..-..+..
T Consensus 205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~ 284 (292)
T COG5006 205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA 284 (292)
T ss_pred ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence 22244556678899999999999999999999999999999999999999999999999999999999999988776655
Q ss_pred ccc
Q 015299 336 HKE 338 (409)
Q Consensus 336 ~~~ 338 (409)
+|+
T Consensus 285 ~~~ 287 (292)
T COG5006 285 RKP 287 (292)
T ss_pred CCC
Confidence 444
No 16
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.90 E-value=9.5e-22 Score=175.84 Aligned_cols=280 Identities=11% Similarity=0.104 Sum_probs=224.4
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcc-CC--CCCHHHHHHHHHHHHH
Q 015299 12 ETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKA-QP--KITFKVFMQIFVLALL 88 (409)
Q Consensus 12 ~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~-~~--~~~~~~~~~~~~~g~~ 88 (409)
+..+|+++.+.+.++||......|.+ +..++.++...|.+-+.++++.+....++.. .. ..+++.+..+.+.++.
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 45689999999999999999999999 6899999999999999988877765543321 11 1244666667777776
Q ss_pred HHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCcccccc
Q 015299 89 GPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFW 168 (409)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~ 168 (409)
- ..++..|.||.....+-+++.=++..|++.++++++++|||+++. |++++.++.+||....+..|..
T Consensus 82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~l----- 149 (293)
T COG2962 82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGSL----- 149 (293)
T ss_pred H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCCC-----
Confidence 5 999999999999999999999999999999999999999999999 8999999999999998644321
Q ss_pred ccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCC
Q 015299 169 TQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHK 248 (409)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (409)
-..++.-+++|+.|...-|+. + .++.+-...-+..-....+...+..+..
T Consensus 150 --------------------------pwval~la~sf~~Ygl~RK~~-~---v~a~~g~~lE~l~l~p~al~yl~~l~~~ 199 (293)
T COG2962 150 --------------------------PWVALALALSFGLYGLLRKKL-K---VDALTGLTLETLLLLPVALIYLLFLADS 199 (293)
T ss_pred --------------------------cHHHHHHHHHHHHHHHHHHhc-C---CchHHhHHHHHHHHhHHHHHHHHHHhcC
Confidence 145667788999999885443 2 2666665655555555555555544443
Q ss_pred CcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhh
Q 015299 249 PSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGL 328 (409)
Q Consensus 249 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~ 328 (409)
...........+..++..|++ +++...++..+-++.+-++.+.++|.+|..-.+++++++||+++..+++..+.|-+|.
T Consensus 200 ~~~~~~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL 278 (293)
T COG2962 200 GQFLQQNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLAL 278 (293)
T ss_pred chhhhcCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 321121333456777777875 6899999999999999999999999999999999999999999999999999999999
Q ss_pred heeeeccc
Q 015299 329 YSVLWGKH 336 (409)
Q Consensus 329 ~l~~~~~~ 336 (409)
+++.+..-
T Consensus 279 ~l~~~d~l 286 (293)
T COG2962 279 ALFSIDGL 286 (293)
T ss_pred HHHHHHHH
Confidence 98876543
No 17
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.88 E-value=1.5e-20 Score=178.10 Aligned_cols=281 Identities=17% Similarity=0.191 Sum_probs=218.2
Q ss_pred HHHHHHHhh-hCCCC--hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCc
Q 015299 30 MNIITKVSL-NRGMS--HYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSP 106 (409)
Q Consensus 30 ~~~~~k~~~-~~~~~--~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 106 (409)
..++..... .+... |..+++.++....++..+.....+++ +.++..++.++..+++. .++..+.+.|++|++.
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~ 90 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFLF-FLASVLSNAALKYISY 90 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCCh
Confidence 334444443 23344 88899999988888777766554422 22334566677778887 8888999999999999
Q ss_pred hhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCC
Q 015299 107 TFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTAS 186 (409)
Q Consensus 107 ~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
+...++.+..|+++++++.+++|+|++++ +++++++..+|+++....+... ++..+.
T Consensus 91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~-----------------~~~~~~ 147 (303)
T PF08449_consen 91 PTQIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSS-----------------SSSSNS 147 (303)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeeccccc-----------------cccccc
Confidence 99999999999999999999999999999 7999999999999998533211 001111
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhc--CCCcc--cccccchhHHH
Q 015299 187 SEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIE--HKPSV--WQIGWDMNLLA 262 (409)
Q Consensus 187 ~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~--~~~~~~~~~~~ 262 (409)
.......|+++.+++.++.|...+.+++..++++.++.+.+++.+.++.+..++....+. ..... +....+..+..
T Consensus 148 ~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~ 227 (303)
T PF08449_consen 148 SSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLY 227 (303)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHH
Confidence 222234499999999999999999999999999889999999999999999888887522 21111 11122223444
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccccc
Q 015299 263 AAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKHKE 338 (409)
Q Consensus 263 l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 338 (409)
++...+ ++.+++...+...++.+|...+++..++.+++++++++++|+++++.+|+|.++++.|..++.+.|+|+
T Consensus 228 l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 228 LLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 444444 567888888899999999999999999999999999999999999999999999999999998877655
No 18
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.88 E-value=5.5e-21 Score=179.40 Aligned_cols=277 Identities=14% Similarity=0.129 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015299 16 PYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQN 95 (409)
Q Consensus 16 g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (409)
++++.++++++||...+..|.. . +.++.++. |..++.+++..+....+.+. ...++.+..-++.|++ .+.++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKI-G-GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhcc-C-CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence 5789999999999999999998 3 78887775 77777777666655433211 1123444444444444 588999
Q ss_pred HHHhhhcccCchhhhhhcc-hhHHHHHHHHHHHhhhhcccccccccch----hhhHHHHHHHHHHHHHhcCCcccccccc
Q 015299 96 FYYAGLKFTSPTFSCAMSN-MLPAMTFVMAVICRMEKINMKKVRCQAK----VVGTAVTVAGAMIMTLYKGPIVELFWTQ 170 (409)
Q Consensus 96 ~~~~al~~~~~~~~~ii~~-~~pi~~~lls~l~l~e~~~~~~~~~~~~----~~~~~i~~~Gv~li~~~~~~~~~~~~~~ 170 (409)
+++.+.++++++.+..+.+ +.+++..+++.+++|||.+++ + ++|+++.++|++++...++..
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~------- 141 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKS------- 141 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccc-------
Confidence 9999999999999999988 899999999999999999988 7 889999999988875321100
Q ss_pred CCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 015299 171 HAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPS 250 (409)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (409)
. +.....+...|++++++++++|+.|.+..|+. ++ +|...++.+.....+....+...+... .
T Consensus 142 --------~----~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~-~ 204 (290)
T TIGR00776 142 --------A----GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV--DGLSVLLPQAIGMVIGGIIFNLGHILA-K 204 (290)
T ss_pred --------c----ccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC--CcceehhHHHHHHHHHHHHHHHHHhcc-c
Confidence 0 00000234679999999999999999999875 35 777775555542222222221211111 1
Q ss_pred ccccccchhHHHHHHHHHHHhHHHHHHHHHHHh-hcCceEeeechhhHHHHHHHHHHHHhccccchhhh----hhHHHHH
Q 015299 251 VWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIK-KRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSV----LGAILIV 325 (409)
Q Consensus 251 ~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~-~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~----iG~~li~ 325 (409)
++ ... .++..+..|++ ..+++.+|..+.+ +.++++.+++.+++|+.+.+++++++||..+..++ +|+++|+
T Consensus 205 ~~--~~~-~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi 280 (290)
T TIGR00776 205 PL--KKY-AILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILII 280 (290)
T ss_pred ch--HHH-HHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHH
Confidence 11 122 33333447887 6899999999999 99999999999999999999999999999999999 9999999
Q ss_pred hhhheeee
Q 015299 326 VGLYSVLW 333 (409)
Q Consensus 326 ~g~~l~~~ 333 (409)
.|+.+...
T Consensus 281 ~~~~l~~~ 288 (290)
T TIGR00776 281 IAANILGI 288 (290)
T ss_pred HHHHHHhc
Confidence 99887644
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.88 E-value=1.6e-21 Score=178.80 Aligned_cols=304 Identities=13% Similarity=0.200 Sum_probs=232.9
Q ss_pred cchhchHHHHHHHHHHHHHHHHHHHHHHhhhCCC--ChHHHHHHHHHHHHHHHHHHH------HHhhhc-c-------C-
Q 015299 9 NFLETSKPYFAMISLQFGYAGMNIITKVSLNRGM--SHYVLVVYRHAFATAVIAPFA------FFLERK-A-------Q- 71 (409)
Q Consensus 9 ~~~~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~r~~~a~i~l~~~~------~~~~~~-~-------~- 71 (409)
..++...|+.++++..++|-.+.-+++..++++- .|+..++..-..-.+.+.++. +...++ . .
T Consensus 8 ~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e 87 (416)
T KOG2765|consen 8 KRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEE 87 (416)
T ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhh
Confidence 3456789999999999999999999999984433 477766655433333333322 111000 0 0
Q ss_pred ------------------------------C---------------------CCCHH------------HHHH-HHHHHH
Q 015299 72 ------------------------------P---------------------KITFK------------VFMQ-IFVLAL 87 (409)
Q Consensus 72 ------------------------------~---------------------~~~~~------------~~~~-~~~~g~ 87 (409)
+ +.+.| +..+ .+....
T Consensus 88 ~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~ 167 (416)
T KOG2765|consen 88 ADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCP 167 (416)
T ss_pred hhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHH
Confidence 0 00111 3333 334444
Q ss_pred HHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccc
Q 015299 88 LGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELF 167 (409)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~ 167 (409)
+ .++.++.++.|+.+++++..+++.+++.+||..++.++..||+++. |.+++++++.|++++...+...
T Consensus 168 l-WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~---- 236 (416)
T KOG2765|consen 168 L-WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ---- 236 (416)
T ss_pred H-HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc----
Confidence 4 5889999999999999999999999999999999999999999999 7999999999999998533111
Q ss_pred cccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh--CCCchhHHHHHHHHHHHHHHHHHHHh
Q 015299 168 WTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETY--KNHQLSLTSLMCFVGTLQAIAVTFVI 245 (409)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~ 245 (409)
..+....+..+|+++++++|+.||+|.++.|+-..+. +.+--.+.++..++..+++.|..++.
T Consensus 237 ---------------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL 301 (416)
T KOG2765|consen 237 ---------------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL 301 (416)
T ss_pred ---------------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 1122345668999999999999999999999887666 23555556667777777777666654
Q ss_pred cC-CCcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHH
Q 015299 246 EH-KPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILI 324 (409)
Q Consensus 246 ~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li 324 (409)
+. ..+.+..+...+...++..++++++++-++|.+|.-.++|.++++.+.++++.+++.+.++-+..+++.+++|.+.|
T Consensus 302 ~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~I 381 (416)
T KOG2765|consen 302 DFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPI 381 (416)
T ss_pred HHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 43 34456666666677778888899999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhheeeeccccc
Q 015299 325 VVGLYSVLWGKHKE 338 (409)
Q Consensus 325 ~~g~~l~~~~~~~~ 338 (409)
++|.+.+++.....
T Consensus 382 fv~Fv~vn~~~~~~ 395 (416)
T KOG2765|consen 382 FVGFVIVNISSENS 395 (416)
T ss_pred HHHHhheecccccc
Confidence 99999998765443
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.81 E-value=3.6e-20 Score=171.85 Aligned_cols=289 Identities=15% Similarity=0.139 Sum_probs=229.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh--CCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 015299 16 PYFAMISLQFGYAGMNIITKVSLN--RGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVID 93 (409)
Q Consensus 16 g~l~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 93 (409)
..++.....++-.......|+.++ +.--|..++..+..++.+..+........+..+..++..+..++.+|++. +++
T Consensus 18 ~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~ 96 (316)
T KOG1441|consen 18 IGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CIS 96 (316)
T ss_pred HHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHH
Confidence 334444455555555666888875 44567888888777777777766655444443333557788899999998 999
Q ss_pred HHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCC
Q 015299 94 QNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAH 173 (409)
Q Consensus 94 ~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~ 173 (409)
..+-+.|+.+.+++.++.+..+.|++++++++++.+|+.+.. .+..+.....||.+... .
T Consensus 97 ~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~-~------------- 156 (316)
T KOG1441|consen 97 HVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV-T------------- 156 (316)
T ss_pred HHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee-c-------------
Confidence 999999999999999999999999999999999999999999 58899999999998873 1
Q ss_pred CCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh--hhCCCchhHHHHHHHHHHHHHH-HHHHHhcCCCc
Q 015299 174 PHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALE--TYKNHQLSLTSLMCFVGTLQAI-AVTFVIEHKPS 250 (409)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~ 250 (409)
+...++.|...++++.+..+..+++.++..+ +.+.|++.+..++..++.+.++ |+....+++..
T Consensus 157 -------------e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~ 223 (316)
T KOG1441|consen 157 -------------ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF 223 (316)
T ss_pred -------------cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce
Confidence 2334589999999999999999999999994 4446999999999999999999 88775555332
Q ss_pred ---ccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhh
Q 015299 251 ---VWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVG 327 (409)
Q Consensus 251 ---~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g 327 (409)
.. ..+......+++.. ++..+.+...+..+.+++|.+.++.+.++-++.++.++++|+++.++.+.+|+++.++|
T Consensus 224 ~~~~~-~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~G 301 (316)
T KOG1441|consen 224 VGFLT-APWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILG 301 (316)
T ss_pred eeeec-cccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHH
Confidence 11 01111233333333 45566677778899999999999999999999999999999999999999999999999
Q ss_pred hheeeeccccccc
Q 015299 328 LYSVLWGKHKEKM 340 (409)
Q Consensus 328 ~~l~~~~~~~~~~ 340 (409)
+++|.+.|.++++
T Consensus 302 v~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 302 VFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHhhhhhc
Confidence 9999988776654
No 21
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.75 E-value=3.2e-16 Score=140.38 Aligned_cols=253 Identities=11% Similarity=0.142 Sum_probs=194.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcc---CCCCCHHHHHHHH-HHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHH
Q 015299 44 HYVLVVYRHAFATAVIAPFAFFLERKA---QPKITFKVFMQIF-VLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAM 119 (409)
Q Consensus 44 ~~~~~~~r~~~a~i~l~~~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~ 119 (409)
|..++.+++++-+++........+++. +-..+|++..+.+ ..++++ ++...+.++|++|++++.+++..+.+++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence 677778888777776666554444332 2346788776544 555555 99999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHH
Q 015299 120 TFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLI 199 (409)
Q Consensus 120 ~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l 199 (409)
+.+++.++.-||+++. -..-+.+..+|+.+++. + +.+....|.++.+
T Consensus 124 IllFs~if~lEk~~w~------L~l~v~lI~~Glflft~-K--------------------------sTqf~i~Gf~lv~ 170 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-K--------------------------STQFNIEGFFLVL 170 (349)
T ss_pred HHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-c--------------------------ccceeehhHHHHH
Confidence 9999999999999988 45556666667776662 3 2234578999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhC---CCchhHHHHHHHHHHHHHHHHHHHhcCCCcc-----cccccch-hHHHHHHHHHHH
Q 015299 200 IATLAWASLFVLQTKALETYK---NHQLSLTSLMCFVGTLQAIAVTFVIEHKPSV-----WQIGWDM-NLLAAAYAGIVT 270 (409)
Q Consensus 200 ~aa~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~-~~~~l~~~g~~~ 270 (409)
+++++.++-....++++++.+ .+|....+.......+.++|..+.+|+.... +...+.. .+..+..+++ +
T Consensus 171 ~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~ 249 (349)
T KOG1443|consen 171 AASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-G 249 (349)
T ss_pred HHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-H
Confidence 999999999999999888763 4899999999999999999999988874322 2222221 2222222222 3
Q ss_pred hHHHHHH---HHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhhee
Q 015299 271 SSISYFV---QGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSV 331 (409)
Q Consensus 271 ~~~~~~l---~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~ 331 (409)
+.+++.+ -+..+.+++..+.++.+..+-+.+.+++..+.+|.++...|+|.++...|+.++
T Consensus 250 g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 250 GLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 3344433 345678999999999999999999999999999999999999999999999887
No 22
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=7.9e-15 Score=135.35 Aligned_cols=300 Identities=14% Similarity=0.155 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCC---CChHHHHHHHHHHHHHHHHHHHHHhhhc----cCCC------CCHHHHHH
Q 015299 15 KPYFAMISLQFGYAGMNIITKVSLNRG---MSHYVLVVYRHAFATAVIAPFAFFLERK----AQPK------ITFKVFMQ 81 (409)
Q Consensus 15 ~g~l~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~a~i~l~~~~~~~~~~----~~~~------~~~~~~~~ 81 (409)
.-++.++...+.++......|+.-..+ +.|...++.--++-.+++....+...++ .... ..+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 556777777888999999999985344 6788888888888888777777665322 1111 24556777
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcC
Q 015299 82 IFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKG 161 (409)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~ 161 (409)
+.+.+++- ++.|.++|.++.+.+++..++..++..+.|++++.+++++|++++ ||.++++.++|+.++-....
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence 88888886 888889999999999999999999999999999999999999999 89999999999999973221
Q ss_pred CccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHH
Q 015299 162 PIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAV 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 241 (409)
++ .++.......+...|....+.+++..+...++.+|++|+.+.+.+..+....++|.++.+..
T Consensus 168 ~~----------------~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~ 231 (345)
T KOG2234|consen 168 SP----------------TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLT 231 (345)
T ss_pred CC----------------CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Confidence 11 11111234567789999999999999999999999999875566666677777777777766
Q ss_pred HHHhcCCCcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhH
Q 015299 242 TFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGA 321 (409)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~ 321 (409)
.+..+.+...|.-. -..|-...+.-++..+++-.+....+|+.+-..=+....+..+++.+.++.++|-.||....+|+
T Consensus 232 ~~~~d~~~i~~~gf-f~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~ 310 (345)
T KOG2234|consen 232 ILLQDGEAINEYGF-FYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA 310 (345)
T ss_pred HhhccccccccCCc-cccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 65433321111100 01122222223333344445555566777776667777789999999999999999999999999
Q ss_pred HHHHhhhheeeeccccc
Q 015299 322 ILIVVGLYSVLWGKHKE 338 (409)
Q Consensus 322 ~li~~g~~l~~~~~~~~ 338 (409)
.+++.++.+|...++++
T Consensus 311 ~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 311 LLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHhhcCCccc
Confidence 99999999998554443
No 23
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.72 E-value=3.5e-16 Score=134.81 Aligned_cols=256 Identities=11% Similarity=0.118 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHH
Q 015299 45 YVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMA 124 (409)
Q Consensus 45 ~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls 124 (409)
..++|+++.+-.++--.+..++++ .+.+...-+.+..+++- +.+.....+.|+++.|-....+-.+..|+-+++++
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~---~~~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG 129 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKK---TEIDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG 129 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeeccc---ccccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence 344555665555554443333221 22333333445555554 37778888999999999999999999999999999
Q ss_pred HHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHH
Q 015299 125 VICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLA 204 (409)
Q Consensus 125 ~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~ 204 (409)
.++.+++.+|+ +..+++..++||++.....+.. ....+.....|.++.+++-..
T Consensus 130 Vl~~~KsY~w~------kY~cVL~IV~GValFmYK~~Kv--------------------~g~e~~t~g~GElLL~lSL~m 183 (337)
T KOG1580|consen 130 VLFAHKSYHWR------KYCCVLMIVVGVALFMYKENKV--------------------GGAEDKTFGFGELLLILSLAM 183 (337)
T ss_pred hhhhcccccHH------HHHHHHHHHHHHHHhhcccccc--------------------CCCcccccchHHHHHHHHHHh
Confidence 99999999999 7999999999999998432221 223445668999999999999
Q ss_pred HHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCC---CcccccccchhHHHHHHHHHHHhHHHHHHHHHH
Q 015299 205 WASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHK---PSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLV 281 (409)
Q Consensus 205 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a 281 (409)
-++....+.++.+.+......+++++++.+.+.+....+ +.++ +..+....+..|+-+..+++ ++++++++.+..
T Consensus 184 DGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~l-fTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~t 261 (337)
T KOG1580|consen 184 DGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLL-FTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKT 261 (337)
T ss_pred cccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhhe-ehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHH
Confidence 999999999987777557778889999999988877665 3332 11222233446777777787 688999999999
Q ss_pred HhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheee
Q 015299 282 IKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 282 l~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
+...+|.+-+++..+.-+|+++.++++|+++++..||+|.++++.+...-.
T Consensus 262 v~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 262 VEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 999999999999999999999999999999999999999999999976644
No 24
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.72 E-value=5.3e-18 Score=147.75 Aligned_cols=253 Identities=14% Similarity=0.168 Sum_probs=202.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHH
Q 015299 43 SHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFV 122 (409)
Q Consensus 43 ~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~l 122 (409)
.|...+|+.+..-+++..+++.+++ + .-...|..+++++++. +-++.+...|.||++....+.+-+...+.+.+
T Consensus 47 ~Pt~QtFl~Y~LLalVY~~~~~fR~-~----~~~~~~~hYilla~~D-VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~ 120 (336)
T KOG2766|consen 47 APTSQTFLNYVLLALVYGPIMLFRR-K----YIKAKWRHYILLAFVD-VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLV 120 (336)
T ss_pred CccHHHHHHHHHHHHHHhhHHHhhh-H----HHHHHHHHhhheeEEe-ecccEEEeeehhhcchHHHHHHHHhhhHHHHH
Confidence 4788899999999999999988744 2 2234566688899988 77888889999999999999999999999999
Q ss_pred HHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHH
Q 015299 123 MAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIAT 202 (409)
Q Consensus 123 ls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa 202 (409)
++|++++.|.++. ++.|+++|++|++++++.+ . |. -++.++.+..+|+++.++++
T Consensus 121 lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sD--V-------~a----------gd~aggsnp~~GD~lvi~GA 175 (336)
T KOG2766|consen 121 LSWFFLKTRYRLM------KISGVVICIVGVVMVVFSD--V-------HA----------GDRAGGSNPVKGDFLVIAGA 175 (336)
T ss_pred HHHHHHHHHHhhh------eeeeEEeEecceEEEEEee--e-------cc----------ccccCCCCCccCcEEEEecc
Confidence 9999999999999 7999999999999998422 1 00 12335667789999999999
Q ss_pred HHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHHHHHHHHHHH
Q 015299 203 LAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVI 282 (409)
Q Consensus 203 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al 282 (409)
-+||+.++..+.+.|+. +..+++....++|+++..+-.+ ++... ...+.++......+. ..++.++-|.+.-..+
T Consensus 176 TlYaVSNv~EEflvkn~--d~~elm~~lgLfGaIIsaIQ~i-~~~~~-~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~ 250 (336)
T KOG2766|consen 176 TLYAVSNVSEEFLVKNA--DRVELMGFLGLFGAIISAIQFI-FERHH-VSTLHWDSAIFLYLR-FALTMFLLYSLAPILI 250 (336)
T ss_pred eeeeeccccHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHh-hhccc-eeeEeehHHHHHHHH-HHHHHHHHHHhhHHhe
Confidence 99999999999999998 9999999999999999998854 44421 112223222222222 3445566666667778
Q ss_pred hhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeee
Q 015299 283 KKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 283 ~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 333 (409)
|..+++-.++-..+.-.|+++. ..||-..+|...+..+.+..|.+++..
T Consensus 251 k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 251 KTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred ecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 8899999999999999999988 677888999999999999999999843
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.68 E-value=3.2e-15 Score=136.07 Aligned_cols=231 Identities=16% Similarity=0.182 Sum_probs=174.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHH
Q 015299 75 TFKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAM 154 (409)
Q Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~ 154 (409)
++++..++.+.+++. ++.+.+.++++++++++..+++.++..++|++++++++|+|++.+ ||+++++.++|++
T Consensus 13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence 467888899999996 999999999999999999999999999999999999999999999 8999999999999
Q ss_pred HHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHH
Q 015299 155 IMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVG 234 (409)
Q Consensus 155 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 234 (409)
++........ +.+++.+...+....+...|.++.++++++.|+..++.+|.+|+.+.+....+......+
T Consensus 86 lv~~~~~~~~----------~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~g 155 (244)
T PF04142_consen 86 LVQLSSSQSS----------DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFG 155 (244)
T ss_pred eeecCCcccc----------ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 9863221110 000000111122345668999999999999999999999999988556666677777777
Q ss_pred HHHHHHHHHHhcCCC-cccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhcccc
Q 015299 235 TLQAIAVTFVIEHKP-SVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENI 313 (409)
Q Consensus 235 ~i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~ 313 (409)
.++.++.....+... ...... ..|-...+.-++...++-++....+|+.+...=+....+..+++.++++++|+.++
T Consensus 156 i~~~~~~~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~ 233 (244)
T PF04142_consen 156 ILFNLLALLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPP 233 (244)
T ss_pred HHHHHHHHhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 777766654332211 110111 11222233334445556667777899999999999999999999999999999999
Q ss_pred chhhhhhHHHH
Q 015299 314 YLGSVLGAILI 324 (409)
Q Consensus 314 ~~~~~iG~~li 324 (409)
+....+|++++
T Consensus 234 s~~f~lg~~~V 244 (244)
T PF04142_consen 234 SLSFLLGAALV 244 (244)
T ss_pred chHHhhheecC
Confidence 99999998763
No 26
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.66 E-value=4.4e-15 Score=133.31 Aligned_cols=266 Identities=12% Similarity=0.107 Sum_probs=212.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHH
Q 015299 43 SHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFV 122 (409)
Q Consensus 43 ~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~l 122 (409)
++..+++.+.+++.++-...+.+...+ ....+.|+.+...++.. .++..+.+.|++|++-....+-.+.-.+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 567778888888877775554443222 22345567777777777 88889999999999999999999999999999
Q ss_pred HHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHH
Q 015299 123 MAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIAT 202 (409)
Q Consensus 123 ls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa 202 (409)
++.++.|+|++.. +.+...+.-.|+.+..+.+..+ +..+....+...|..++...-
T Consensus 126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~------------------s~~~~g~~ns~~G~~Ll~~~L 181 (327)
T KOG1581|consen 126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD------------------SSSKSGRENSPIGILLLFGYL 181 (327)
T ss_pred HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC------------------CccccCCCCchHhHHHHHHHH
Confidence 9999999999999 5888888889998887533111 222334567789999999999
Q ss_pred HHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc--cccccchhHHHHHHHHHHHhHHHHHHHHH
Q 015299 203 LAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSV--WQIGWDMNLLAAAYAGIVTSSISYFVQGL 280 (409)
Q Consensus 203 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~~~l~~~ 280 (409)
+.-+..+..++++.++.|.++..++++.++++++......+..+...+. +.-..+..+.-++.... ++.+++.+.++
T Consensus 182 ~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~ 260 (327)
T KOG1581|consen 182 LFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFY 260 (327)
T ss_pred HHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehh
Confidence 9999999999999999888999999999999999988775422221111 11122335666666666 56799999999
Q ss_pred HHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecccc
Q 015299 281 VIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKHK 337 (409)
Q Consensus 281 al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 337 (409)
-+++.++.+.+.++.++-.++++++.+++|.+.+..||+|..+++.|+.+-...+++
T Consensus 261 TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 261 TIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999887665554
No 27
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.63 E-value=2.4e-15 Score=117.69 Aligned_cols=135 Identities=13% Similarity=0.190 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCC-CCCHHHHHHHHHHHHHHHHHH
Q 015299 15 KPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQP-KITFKVFMQIFVLALLGPVID 93 (409)
Q Consensus 15 ~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 93 (409)
...++++++++++|...++.|..+ +++||...++.|.++..+++..+....++...+ ..+.|.|..+.+.|+.+ +++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence 467899999999999999999997 899999999999999999999888776553322 34778899999999777 999
Q ss_pred HHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 94 QNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 94 ~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
+.+||.|++...++.+..+..++|+++.+++++++|||++.. +++|+.+..+|++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999999999 7999999999998764
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.62 E-value=3.2e-13 Score=122.97 Aligned_cols=291 Identities=11% Similarity=0.071 Sum_probs=220.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHH--HHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLV--VYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPV 91 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~--~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (409)
..+++.++.-.+.--.+.+..|.+++..--|..+. +.+++...+.+...-.. +--+.++++++..+.++...++. .
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~lf-~ 88 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLLF-V 88 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHHH-H
Confidence 44566666666666677788898874332233333 36766666555543322 22345668899999999999997 7
Q ss_pred HHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccC
Q 015299 92 IDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQH 171 (409)
Q Consensus 92 ~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~ 171 (409)
+....-..+++|++++..+++.+.+|+++++...+++|.+++.. .+.++...++|..+....
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~------------ 150 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT------------ 150 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc------------
Confidence 88888899999999999999999999999999999999888877 688888888888777631
Q ss_pred CCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCC--
Q 015299 172 AHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKP-- 249 (409)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-- 249 (409)
+......|..+++...++.+.+.+..|+..+..+.+.+.+++|..+.+........+++++-.
T Consensus 151 ---------------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l 215 (314)
T KOG1444|consen 151 ---------------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDAL 215 (314)
T ss_pred ---------------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHH
Confidence 122335599999999999999999999988776567888899999999888888887555411
Q ss_pred --cccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhh
Q 015299 250 --SVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVG 327 (409)
Q Consensus 250 --~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g 327 (409)
..........+..++..++++. .-.++-.++.+..++++.++++..+...+.+-..+++|++.++...+|..+-++|
T Consensus 216 ~~~~~~~~~~~~~~~~~lScv~gf-~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~g 294 (314)
T KOG1444|consen 216 SLNFDNWSDSSVLVVMLLSCVMGF-GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFG 294 (314)
T ss_pred HhhcccccchhHHHHHHHHHHHHH-HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhh
Confidence 1111122234566666666554 4445556889999999999999888888888888888999999999999999999
Q ss_pred hheeeeccccccc
Q 015299 328 LYSVLWGKHKEKM 340 (409)
Q Consensus 328 ~~l~~~~~~~~~~ 340 (409)
-++|+..+.++++
T Consensus 295 gv~Y~~~~~~~k~ 307 (314)
T KOG1444|consen 295 GVLYSYATFRKKK 307 (314)
T ss_pred hhHHhhhhhhhcc
Confidence 9999887765544
No 29
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.58 E-value=2.4e-15 Score=132.60 Aligned_cols=270 Identities=14% Similarity=0.119 Sum_probs=205.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhc----cCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchh
Q 015299 43 SHYVLVVYRHAFATAVIAPFAFFLERK----AQP--KITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNML 116 (409)
Q Consensus 43 ~~~~~~~~r~~~a~i~l~~~~~~~~~~----~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~ 116 (409)
.|..+.++++++...+...+-....+- ..+ +++.+..+.++.+.++. .+...+-+++++|.+++...+-.++.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchh
Confidence 477888888888877776655432221 111 24566666677777776 66677779999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHH
Q 015299 117 PAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSI 196 (409)
Q Consensus 117 pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 196 (409)
.+|+.+++++++|+|-+.. ...++.+.+.|-.+=+-.+ ...+.-.+.|.+
T Consensus 139 tvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGvdqE------------------------~~~~~ls~~Gvi 188 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGVDQE------------------------GSTGTLSWIGVI 188 (347)
T ss_pred hhHHHHhHHhhcccccccc------cceeehhheehheeccccc------------------------cccCccchhhhH
Confidence 9999999999999999888 4666666666655433111 123455689999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--c-ccchhHHHHHHHHHHHhHH
Q 015299 197 FLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQ--I-GWDMNLLAAAYAGIVTSSI 273 (409)
Q Consensus 197 ~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~-~~~~~~~~l~~~g~~~~~~ 273 (409)
+++.++++-|+..+..||.....+..-+.+++|.+..+.++++|...+.+.-...+. . +....|..+...|+++-.+
T Consensus 189 fGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~m 268 (347)
T KOG1442|consen 189 FGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAM 268 (347)
T ss_pred HHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998877664567788999999999999999885443222222 2 2233566666666655444
Q ss_pred HHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccccccccccC
Q 015299 274 SYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKHKEKMEEFG 344 (409)
Q Consensus 274 ~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~~~~~ 344 (409)
+|. -.+-+|.++|.+..+-...+-....++++.+++|.-+..-|-|-.++++|...|.+.|+++++++.+
T Consensus 269 gyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~ 338 (347)
T KOG1442|consen 269 GYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA 338 (347)
T ss_pred hhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence 432 2345889999999999999999999999999999999999999999999999999998888766544
No 30
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.56 E-value=1.3e-13 Score=107.96 Aligned_cols=136 Identities=16% Similarity=0.179 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHH
Q 015299 194 GSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSI 273 (409)
Q Consensus 194 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 273 (409)
-.++++++++.+++..+..|-..++. ||..-+.....+..+.+..+..........-. .+...|..++..|+ .+++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v--dp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~-~~~k~~lflilSGl-a~gl 79 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV--DPDFATTIRTIVILIFLLIVLLVTGNWQAGGE-IGPKSWLFLILSGL-AGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc--CccHHHHHHHHHHHHHHHHHHHhcCceecccc-cCcceehhhhHHHH-HHHH
Confidence 36899999999999999999988888 99999999999988888877764333211111 23457888888885 6789
Q ss_pred HHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeee
Q 015299 274 SYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 274 ~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 333 (409)
+..+|+++++..+++.+.++.-+.|+++++++++++||++|..+|+|+++|++|.+++.+
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999999999999999999988764
No 31
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.55 E-value=6.7e-14 Score=123.77 Aligned_cols=270 Identities=14% Similarity=0.098 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCchhhhhhcchhHHHHHHH
Q 015299 45 YVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKF-TSPTFSCAMSNMLPAMTFVM 123 (409)
Q Consensus 45 ~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~ii~~~~pi~~~ll 123 (409)
..++|.++++.+.--+++.-- -...+++++.|++...+.. .+..+.+.++++++ ++...-.++.+-+++.++++
T Consensus 34 NLITFaqFlFia~eGlif~sk-f~~~k~kiplk~Y~i~V~m----FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSK-FFTVKPKIPLKDYAITVAM----FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeecc-ccccCCCCchhhhheehhe----eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 566676766655544433211 1122356666665543332 25567777889988 67788888899999999999
Q ss_pred HHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHH
Q 015299 124 AVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATL 203 (409)
Q Consensus 124 s~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~ 203 (409)
+++++|+|.+.+ |+.++++..+|+++..+.+.++... +. .+=++.+.......+.+|+.+..++.+
T Consensus 109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~--~~------~~l~~~~~~~~~~~w~iGi~lL~~al~ 174 (330)
T KOG1583|consen 109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS--KL------SGLDSGSAQSDFFWWLIGIALLVFALL 174 (330)
T ss_pred HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh--hh------cccccCcccccchHHHHHHHHHHHHHH
Confidence 999999999999 8999999999999998765444321 00 000111223345567899999999999
Q ss_pred HHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHH-hcC-----CCcccccc-----cchhHHHHHHHHHHHhH
Q 015299 204 AWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFV-IEH-----KPSVWQIG-----WDMNLLAAAYAGIVTSS 272 (409)
Q Consensus 204 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~-----~~~~~~~~-----~~~~~~~l~~~g~~~~~ 272 (409)
..|...++++...++++.|+.+..+|....+....+...-- ..+ ..+.+..+ -+..|..++.-.+ ...
T Consensus 175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy 253 (330)
T KOG1583|consen 175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQY 253 (330)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHH
Confidence 99999999999999999999999999997766554433210 000 01111111 1223444433221 222
Q ss_pred HHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeec
Q 015299 273 ISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWG 334 (409)
Q Consensus 273 ~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 334 (409)
.+.--.+..-.+.++.+++++..++-.++.+++.++|+++++++.|+|++++++|.+++...
T Consensus 254 ~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 254 FCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred HHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 22222233345778899999999999999999999999999999999999999998887643
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.50 E-value=1.1e-13 Score=113.03 Aligned_cols=125 Identities=18% Similarity=0.402 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015299 25 FGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKFT 104 (409)
Q Consensus 25 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 104 (409)
++||...++.|... ++.+|....++|+..+.+ ++++....+++.....+++++......++++..+++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 46899999999995 779999999999999998 6666655555444566788899999999997799999999999999
Q ss_pred CchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 105 SPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 105 ~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
+++.++++.++.|+++.+++++++||+++++ +++|+++.++|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 7999999999999875
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.39 E-value=7.4e-13 Score=108.17 Aligned_cols=124 Identities=20% Similarity=0.371 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHHHHHHHHHHH
Q 015299 203 LAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVI 282 (409)
Q Consensus 203 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al 282 (409)
++||.+.+..|+..++. ++...+++++..+.+ .++.....+... ....+...+...++.+++++.+++.++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI--SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred ceeeeHHHHHHHHhccC--CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence 46899999999999998 999999999999998 666665444432 2222334677788888888899999999999
Q ss_pred hhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhhee
Q 015299 283 KKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSV 331 (409)
Q Consensus 283 ~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~ 331 (409)
++.+++.++.+.+++|+++.++++++++|+++..+++|++++++|+++.
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765
No 34
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.34 E-value=6.1e-11 Score=105.33 Aligned_cols=280 Identities=15% Similarity=0.141 Sum_probs=195.1
Q ss_pred HHHHHHHHHhh---hCCCC----hHHHHHHHHHHHHHHHHHHHHHhhhccCCC-------------CCHHHHHHHHHHHH
Q 015299 28 AGMNIITKVSL---NRGMS----HYVLVVYRHAFATAVIAPFAFFLERKAQPK-------------ITFKVFMQIFVLAL 87 (409)
Q Consensus 28 ~~~~~~~k~~~---~~~~~----~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~g~ 87 (409)
+.+.+++|++- .++.+ |+.....-++--++++..+.+++.+...+. .+.+ ....+..++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pal 94 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPAL 94 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChHH
Confidence 45677788873 12333 455554444444455555555544322111 0122 223445778
Q ss_pred HHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccc
Q 015299 88 LGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELF 167 (409)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~ 167 (409)
+. ..+..+.|.++.+++++..+.+.....+|+.+++.-+++.+++.+ ||+|+....+|++++...+ ..
T Consensus 95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d--~~--- 162 (372)
T KOG3912|consen 95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLD--VH--- 162 (372)
T ss_pred HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeee--cc---
Confidence 87 667778888999999999999999999999999999999999999 7999999999999986321 00
Q ss_pred cccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcC
Q 015299 168 WTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEH 247 (409)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 247 (409)
..++...+..+...|+++.+.+-+.-|+.+++.+|.+++.+.+|...+.+...+|.+++..++..+..
T Consensus 163 ------------~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~y 230 (372)
T KOG3912|consen 163 ------------LVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYY 230 (372)
T ss_pred ------------cccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhh
Confidence 00111123356688999999999999999999999999987899999999999996665554443322
Q ss_pred C--Cccccccc---------------chhHHHHHHHHHHHhH-HHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHh
Q 015299 248 K--PSVWQIGW---------------DMNLLAAAYAGIVTSS-ISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFIL 309 (409)
Q Consensus 248 ~--~~~~~~~~---------------~~~~~~l~~~g~~~~~-~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~ 309 (409)
- ...++-.+ ....+.+...|...+. ..++.=....|..++++-.++-.++..+-.+++....
T Consensus 231 i~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~ 310 (372)
T KOG3912|consen 231 IPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG 310 (372)
T ss_pred eecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH
Confidence 1 10111110 1112233333332221 1122223456788899999999999999999999999
Q ss_pred ccccchhhhhhHHHHHhhhheee
Q 015299 310 AENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 310 ~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
.|.+...|+.|.++.+.|+++|+
T Consensus 311 ~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 311 WEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986
No 35
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.32 E-value=3.7e-12 Score=107.28 Aligned_cols=215 Identities=13% Similarity=0.050 Sum_probs=163.8
Q ss_pred HHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccc
Q 015299 90 PVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWT 169 (409)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~ 169 (409)
..+.++.|..+++.+++++++.+....-.|+.+++++++++|+... ++++.++++.|++++...+
T Consensus 63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~D--------- 127 (290)
T KOG4314|consen 63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYAD--------- 127 (290)
T ss_pred EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEecc---------
Confidence 4788999999999999999999999999999999999999999999 6999999999999987422
Q ss_pred cCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchhHHHHHHHHHHHH-HHHHHHHhcC
Q 015299 170 QHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKN-HQLSLTSLMCFVGTLQ-AIAVTFVIEH 247 (409)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~i~-~~~~~~~~~~ 247 (409)
......++|+.+++.+++..|+|-++.|+.....+- +.-..+.-..++..++ ..|.......
T Consensus 128 ----------------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T 191 (290)
T KOG4314|consen 128 ----------------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFT 191 (290)
T ss_pred ----------------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHh
Confidence 123445899999999999999999999998876521 2222222222222222 2222221112
Q ss_pred CCcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhh
Q 015299 248 KPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVG 327 (409)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g 327 (409)
..+.|+-.....|..+...+.+ +....++.+.++..+.|...++-+....+-....+.++-+-..+...+.|..+|+.|
T Consensus 192 ~VE~~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~ 270 (290)
T KOG4314|consen 192 GVEHLQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG 270 (290)
T ss_pred chHHHHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2233332223357777776665 345567788999999999999999999999999999888878899999999999999
Q ss_pred hheeeeccc
Q 015299 328 LYSVLWGKH 336 (409)
Q Consensus 328 ~~l~~~~~~ 336 (409)
.+++.....
T Consensus 271 FiLiiiP~d 279 (290)
T KOG4314|consen 271 FILIIIPED 279 (290)
T ss_pred HHheecccc
Confidence 998887543
No 36
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.29 E-value=6.6e-11 Score=104.61 Aligned_cols=278 Identities=13% Similarity=0.143 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHhh-hCCCCh--HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015299 24 QFGYAGMNIITKVSL-NRGMSH--YVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAG 100 (409)
Q Consensus 24 ~~~~~~~~~~~k~~~-~~~~~~--~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 100 (409)
.+++=....+-.+.+ .+++.| +.+++.++.+-..+-+..+... +..+...+|| .+..++.+. .+...+.+-+
T Consensus 52 Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~r---tY~~la~~t-~gtmGLsn~S 126 (367)
T KOG1582|consen 52 FFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWR---TYVILAFLT-VGTMGLSNGS 126 (367)
T ss_pred HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEee-cccceecchh---HhhhhHhhh-hhccccCcCc
Confidence 334445555666655 356765 4556666555433333322221 1222233444 455555555 6677778889
Q ss_pred hcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCc
Q 015299 101 LKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDA 180 (409)
Q Consensus 101 l~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~ 180 (409)
+.|+.-..-.++.++.-+-+++.+.++-+.|..+. +.++..+...|.++..+.+..
T Consensus 127 lgYLNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~------------------ 182 (367)
T KOG1582|consen 127 LGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQ------------------ 182 (367)
T ss_pred cccccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhcccc------------------
Confidence 99998888888889888889999999999999999 799999999999999875522
Q ss_pred CcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc---cc
Q 015299 181 TTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIG---WD 257 (409)
Q Consensus 181 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~ 257 (409)
.+.+.+.+|..+.-+|-++-|.-.-++++..+.++.+..+++++...++.+.++.......+-++.|+.- +.
T Consensus 183 -----~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~ 257 (367)
T KOG1582|consen 183 -----TSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPV 257 (367)
T ss_pred -----cCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcH
Confidence 2334557899999999999999999999999988556778888888888888877776444434444321 11
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccc
Q 015299 258 MNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 258 ~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
..+...+.... .+.+++.....-++..++.+++.+...+-.+++++++++|..++|....-|..+|+.|+++-.+.|+
T Consensus 258 ~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 258 RTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred hHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 13333333333 4566777777778999999999999999999999999999999999999999999999999887764
No 37
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.27 E-value=7e-11 Score=100.30 Aligned_cols=139 Identities=19% Similarity=0.209 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-----hCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc---cc------cchh
Q 015299 194 GSIFLIIATLAWASLFVLQTKALET-----YKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQ---IG------WDMN 259 (409)
Q Consensus 194 G~~~~l~aa~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~------~~~~ 259 (409)
|.++++.+.++.|++.++.|+..++ .+.++..+..+....+.+.++|...+.|....... .. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999999888 45799999999999999999999887766431111 10 1123
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeee
Q 015299 260 LLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 260 ~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 333 (409)
+..++..|+ ...+.+...+..+++++|.+.+++..++.+..++++++++||+++..+++|.++.++|.++|++
T Consensus 81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 444555555 3567778888999999999999999999999999999999999999999999999999999874
No 38
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.26 E-value=1.9e-09 Score=97.99 Aligned_cols=221 Identities=17% Similarity=0.160 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhc-chhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHH
Q 015299 77 KVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMS-NMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMI 155 (409)
Q Consensus 77 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~l 155 (409)
+.+...++.|++- .+++...+.|+++.+++.+..+. .++-+.+.+++.++++|--+... -..-.+++++.++|+++
T Consensus 43 ~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~l 119 (269)
T PF06800_consen 43 TSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVIL 119 (269)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHH
Confidence 7777778888876 99999999999999999999997 67888899999999999776652 00012367777888887
Q ss_pred HHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHH
Q 015299 156 MTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGT 235 (409)
Q Consensus 156 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (409)
....++.+ ++..+..+...|....+.+++.|..|.+..|.. +. ++.....-+.....
T Consensus 120 ts~~~~~~-------------------~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~--~~~~~~lPqaiGm~ 176 (269)
T PF06800_consen 120 TSYQDKKS-------------------DKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HV--SGWSAFLPQAIGML 176 (269)
T ss_pred hccccccc-------------------cccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CC--ChhHhHHHHHHHHH
Confidence 76433211 011124566789999999999999999996662 33 77777766655544
Q ss_pred HHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccch
Q 015299 236 LQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYL 315 (409)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~ 315 (409)
+..+.+..+. + . .......|..+ ..|++ -.++..++..+.++.+.++.=.+..+.++++.+.+.++++|.=+.
T Consensus 177 i~a~i~~~~~-~--~--~~~~k~~~~ni-l~G~~-w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ 249 (269)
T PF06800_consen 177 IGAFIFNLFS-K--K--PFFEKKSWKNI-LTGLI-WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTK 249 (269)
T ss_pred HHHHHHhhcc-c--c--cccccchHHhh-HHHHH-HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCch
Confidence 4444444422 1 1 11112234333 33443 457888899999999999999999999999999999999998775
Q ss_pred h----hhhhHHHHHhhhhe
Q 015299 316 G----SVLGAILIVVGLYS 330 (409)
Q Consensus 316 ~----~~iG~~li~~g~~l 330 (409)
. .++|.+++++|.++
T Consensus 250 ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 250 KEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hhHHHHHHHHHHHHHhhhc
Confidence 5 56788989888654
No 39
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.24 E-value=2e-10 Score=106.41 Aligned_cols=133 Identities=14% Similarity=0.297 Sum_probs=113.7
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHH
Q 015299 12 ETSKPYFAMISLQFGYAGMNIITKVSLNRGMSH--YVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLG 89 (409)
Q Consensus 12 ~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 89 (409)
.+.+|.+++++++++|+...+..|... ++.++ .....+++.++.+++.++....++. +..+.+.+..++..++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence 456899999999999999999999994 56664 4555578999998888887664332 233667788888899888
Q ss_pred HHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHH
Q 015299 90 PVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGA 153 (409)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv 153 (409)
..+++.++++++++.+++.++++.++.|+++.++++++++|+++.. +++|+.+.+.|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999 799999999886
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.20 E-value=6.1e-11 Score=95.23 Aligned_cols=103 Identities=13% Similarity=0.286 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHH
Q 015299 49 VYRHAFATAVIAPFAFFLERK--AQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVI 126 (409)
Q Consensus 49 ~~r~~~a~i~l~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l 126 (409)
.+|+..+.+++..+...+++. ..+..+.+.+.+.+..|+++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 578999998888887774332 122234456677778888885689999999999999 68899999999999999999
Q ss_pred HhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 127 CRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 127 ~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
++|||++++ ++++++++++|++++..
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence 999999999 79999999999999985
No 41
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.15 E-value=1.3e-09 Score=102.24 Aligned_cols=279 Identities=16% Similarity=0.223 Sum_probs=156.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCC-CCCHHH-HHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQP-KITFKV-FMQIFVLALLGP 90 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~~~ 90 (409)
...|.++++.++++.+....+.|....+ .+ +...+. ...++. ....++.|++..
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~-----------------------~~~~~~~~~~~~~l~~~~W~~G~~~~ 60 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLR-LP-----------------------RGSLRAGSGGRSYLRRPLWWIGLLLM 60 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-----------------------cccccccchhhHHHhhHHHHHHHHHH
Confidence 4679999999999999999999998511 00 000000 001111 123445566666
Q ss_pred HHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCcccccccc
Q 015299 91 VIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQ 170 (409)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~ 170 (409)
.++..+.+.|+.+.|.+..+.+..+.-++.++++.+++|||++++ +++|+.++++|..+++... |..+
T Consensus 61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~-~~~~----- 128 (300)
T PF05653_consen 61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFA-PKEE----- 128 (300)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeC-CCCC-----
Confidence 778888899999999999999999999999999999999999999 7999999999998887432 2210
Q ss_pred CCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHH---HHHHhcC
Q 015299 171 HAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIA---VTFVIEH 247 (409)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~ 247 (409)
+.+ +.+.-.+.-.+...+........ +...+.....+|..++ +..........+++...+. +......
T Consensus 129 --~~~---t~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~---~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~ 199 (300)
T PF05653_consen 129 --PIH---TLDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYGRR---NILVYISICSLIGSFTVLSAKAISILIKL 199 (300)
T ss_pred --CcC---CHHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhccc---ceEEEEEEeccccchhhhHHHHHHHHHHH
Confidence 000 00000000000001111111111 1222222222221111 2222222222222221111 1110111
Q ss_pred CC-cccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhH-HHHHHHHHHHHhcccc--ch----hhhh
Q 015299 248 KP-SVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLM-MIIVAIMGSFILAENI--YL----GSVL 319 (409)
Q Consensus 248 ~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~-pv~a~l~~~~~~~e~~--~~----~~~i 319 (409)
.. ..........|..++.+ +++...-....++|+++.+++.+.++.+.- ...+++-|.++++|.. +. ....
T Consensus 200 ~~~g~~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~ 278 (300)
T PF05653_consen 200 TFSGDNQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLC 278 (300)
T ss_pred HhcCchhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHH
Confidence 00 11112222234333332 334445556668999999999999888874 4556666777888753 33 3577
Q ss_pred hHHHHHhhhheeeecccc
Q 015299 320 GAILIVVGLYSVLWGKHK 337 (409)
Q Consensus 320 G~~li~~g~~l~~~~~~~ 337 (409)
|..+++.|+++....|..
T Consensus 279 G~~~ii~GV~lL~~~~~~ 296 (300)
T PF05653_consen 279 GFLIIIIGVFLLSSSKDK 296 (300)
T ss_pred HHHHHHHhhheeeccCch
Confidence 888899999988765443
No 42
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.12 E-value=5.3e-10 Score=96.19 Aligned_cols=288 Identities=11% Similarity=0.091 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-hCCCCh-HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 015299 15 KPYFAMISLQFGYAGMNIITKVSL-NRGMSH-YVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVI 92 (409)
Q Consensus 15 ~g~l~~~~~~~~~~~~~~~~k~~~-~~~~~~-~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (409)
.+.+--+.+.+ ++.+..|+.+ +.+++- +.+++.+.++..+-+..+-+.+--+. +..+.|.|. ..+++- ..
T Consensus 9 ~~~lsYc~sSI---lmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f-R~t~aK~Wf---piSfLL-v~ 80 (309)
T COG5070 9 TASLSYCFSSI---LMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF-RLTKAKKWF---PISFLL-VV 80 (309)
T ss_pred hHHHHHHHHHH---HHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe-ehhhhhhhc---CHHHHH-HH
Confidence 34444445555 4455567765 234443 44455555555444443322211111 122233343 333333 33
Q ss_pred HHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCC
Q 015299 93 DQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHA 172 (409)
Q Consensus 93 ~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~ 172 (409)
..+.--.+++|++++..+++.+++.+.++....++++.|++-.+ ..+.++.+..-+...+.+....
T Consensus 81 MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~-------- 146 (309)
T COG5070 81 MIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQAS-------- 146 (309)
T ss_pred HHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHH--------
Confidence 34455789999999999999999999999999999999998884 7776666665555542111000
Q ss_pred CCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc-
Q 015299 173 HPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSV- 251 (409)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~- 251 (409)
.......+.|.++.....+..+.+....|+-.+-.+-.....++|....+..+++.+.+++|+..+.
T Consensus 147 ------------~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n 214 (309)
T COG5070 147 ------------AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN 214 (309)
T ss_pred ------------HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch
Confidence 0011245679999999999999999998887664433567788999999999999988877653221
Q ss_pred ccc-ccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhhe
Q 015299 252 WQI-GWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYS 330 (409)
Q Consensus 252 ~~~-~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l 330 (409)
... .+.....++...|+ +++.--++-.+.++.++.++.++++.++..-..+.|.++|||+.+...+....+-..+..+
T Consensus 215 ~annl~~d~l~am~ISgl-~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i 293 (309)
T COG5070 215 LANNLSVDSLMAMFISGL-CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI 293 (309)
T ss_pred hhcCCChHHHHHHHHHHH-HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence 111 11113344555555 4555556667889999999999999999999999999999999999999988887766666
Q ss_pred eeecccc
Q 015299 331 VLWGKHK 337 (409)
Q Consensus 331 ~~~~~~~ 337 (409)
|...+.+
T Consensus 294 Yavaks~ 300 (309)
T COG5070 294 YAVAKSK 300 (309)
T ss_pred HHHHHHH
Confidence 6555443
No 43
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.10 E-value=1e-07 Score=90.17 Aligned_cols=299 Identities=13% Similarity=0.089 Sum_probs=179.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHH-HHHHHHHHHH-HHHhhh---ccCCCCCHHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRH-AFATAVIAPF-AFFLER---KAQPKITFKVFMQIFVLAL 87 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~-~~a~i~l~~~-~~~~~~---~~~~~~~~~~~~~~~~~g~ 87 (409)
...|++..+++.++||..++..|.. +..+ ++..+.-. +++.+++-.. ..+..+ ......+.+.+..-++.|+
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV--KKWS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc--CCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 4679999999999999999999996 4333 22222211 1111111100 011011 1112245677777777888
Q ss_pred HHHHHHHHHHHhhhcccCchhhhhhc-chhHHHHHHHHHHHhhhhc---ccccccccchhhhHHHHHHHHHHHHHhcCCc
Q 015299 88 LGPVIDQNFYYAGLKFTSPTFSCAMS-NMLPAMTFVMAVICRMEKI---NMKKVRCQAKVVGTAVTVAGAMIMTLYKGPI 163 (409)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pi~~~lls~l~l~e~~---~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~ 163 (409)
+- .+++..++.++++..++.+..+. .++-++..++..++++|=- +.. -...-.+|+++.++|+++....+...
T Consensus 82 ~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~Ag~~k 158 (345)
T PRK13499 82 LW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGRAGQLK 158 (345)
T ss_pred HH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 76 99999999999999999998884 6889999999999998743 111 11224678899999999998533111
Q ss_pred cccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHH-------HHHHHHhhhhCCCchhHHHHHHH---H
Q 015299 164 VELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLF-------VLQTKALETYKNHQLSLTSLMCF---V 233 (409)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~---~ 233 (409)
. ++ ++.++..+.+...|+++++++++.++.|. ...+...+ .+.++.....-+.. .
T Consensus 159 ~------------~~--~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g~~~~~~~lp~~~~~~~ 223 (345)
T PRK13499 159 E------------RK--MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LGVDPLYAALPSYVVIMG 223 (345)
T ss_pred c------------cc--cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cCCCchHHHHHHHHHHHH
Confidence 0 00 00000234567899999999999999999 43333211 22244433333332 3
Q ss_pred HHHHHHH-HHHHh--c-CCCcccc-cc-c----chhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeee---ch-hhHHH
Q 015299 234 GTLQAIA-VTFVI--E-HKPSVWQ-IG-W----DMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATA---FS-PLMMI 299 (409)
Q Consensus 234 ~~i~~~~-~~~~~--~-~~~~~~~-~~-~----~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~---~~-~l~pv 299 (409)
+.++... +.... . ++..... .. + ..+...-+..|+ .-.++++++..+-++.+...... +. .+..+
T Consensus 224 G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Vi 302 (345)
T PRK13499 224 GGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVL 302 (345)
T ss_pred HHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHH
Confidence 3333222 11211 1 1111011 11 1 112122233333 45677778888888776655544 44 77889
Q ss_pred HHHHHHHHHhccccc------hhhhhhHHHHHhhhheeeec
Q 015299 300 IVAIMGSFILAENIY------LGSVLGAILIVVGLYSVLWG 334 (409)
Q Consensus 300 ~a~l~~~~~~~e~~~------~~~~iG~~li~~g~~l~~~~ 334 (409)
++.++|. +++|.=+ ..-++|.+++++|..+....
T Consensus 303 istlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 303 CGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 9999999 5998755 55799999999998776544
No 44
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.09 E-value=3.8e-09 Score=99.67 Aligned_cols=136 Identities=12% Similarity=0.087 Sum_probs=113.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVI 92 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (409)
+..|.++.++++++|+...+..|.. .++.++.... +...++.+++.++...... ....++..+...+..|++...+
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~-~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~ 221 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRA-GAEHGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL 221 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999998 4667777764 4456666677776655322 1224556666677899998889
Q ss_pred HHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 93 DQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 93 ~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
.+.++++++++.+++.++++.++.|+++.++++++++|+++.. +++|.++.++|++....
T Consensus 222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999 79999999999999874
No 45
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.08 E-value=3.7e-09 Score=99.75 Aligned_cols=138 Identities=13% Similarity=0.104 Sum_probs=115.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVI 92 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (409)
+..|.++.++++++|+...+..|.. .. -++....+++..++.+.+.++............+...|..++..++++..+
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRL-PL-PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhc-CC-CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999999999999997 33 345666778888888888777654322211123567888889999998789
Q ss_pred HHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 93 DQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 93 ~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
.+.++++++++.+++.++++..+.|++++++++++++|+++.. +++|.++.+.|++++..
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 79999999999998863
No 46
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.05 E-value=2.2e-09 Score=100.69 Aligned_cols=133 Identities=11% Similarity=0.096 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHHH
Q 015299 195 SIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSIS 274 (409)
Q Consensus 195 ~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 274 (409)
..+.+++++++|...+..|+..++. ++. ..+.+...++.+.|+.... .....+..... .++..+..+.++....
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 76 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE--PDF--LWWALLAHSVLLTPYGLWY-LAQVGWSRLPA-TFWLLLAISAVANMVY 76 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch--hHH--HHHHHHHHHHHHHHHHHHh-cccCCCCCcch-hhHHHHHHHHHHHHHH
Confidence 4678999999999999999877765 443 3555566666666666522 11223333232 3343444455567788
Q ss_pred HHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeee
Q 015299 275 YFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 275 ~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 333 (409)
+.++++++++.+++.++++.++.|+++.+++++++||+++..+++|.+++++|+++...
T Consensus 77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999887764
No 47
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.05 E-value=1.7e-09 Score=97.74 Aligned_cols=215 Identities=14% Similarity=0.094 Sum_probs=134.7
Q ss_pred cCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccc--cccCCCCCCCCCcC
Q 015299 104 TSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELF--WTQHAHPHDKSDAT 181 (409)
Q Consensus 104 ~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~--~~~~~~~~~~~~~~ 181 (409)
++........+..++++++..+.+.++|++.. |++++++...|++...+.+.+..... ...-...+.+++
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~-- 73 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQS-- 73 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCC--
Confidence 34556677788999999999999999999966 79999999999886543221110000 000000000000
Q ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcC-C-Ccccc--cccc
Q 015299 182 TSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEH-K-PSVWQ--IGWD 257 (409)
Q Consensus 182 ~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~--~~~~ 257 (409)
+.......+...|..+.+.+.++.+...+++++..|+.+......+....+.+.+....... ... + ...+. ...+
T Consensus 74 ~~~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 152 (222)
T TIGR00803 74 SAKTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLL-WSDGTLISNFGFFIGYP 152 (222)
T ss_pred CccccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHh-hcccchhhccCcccCCc
Confidence 00011223567888889999999999999999986655112222222222333332222111 111 1 01111 1111
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhhee
Q 015299 258 MNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSV 331 (409)
Q Consensus 258 ~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~ 331 (409)
...+.+ ++..++++.+..+.+++.++...+....++++++.++++++|||+++..+++|+.+++.|+++|
T Consensus 153 ~~~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 153 TAVWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred hHHHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 111222 2345566777889999999999999999999999999999999999999999999999998764
No 48
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.03 E-value=2.4e-09 Score=101.24 Aligned_cols=138 Identities=11% Similarity=0.042 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cccchhHHHHHHHH
Q 015299 190 DWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQ--IGWDMNLLAAAYAG 267 (409)
Q Consensus 190 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g 267 (409)
+...|.++.++++++|+...+..|.. .+. +|.+..+++..++.+++.+..... +...... ..+...+ .....+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~--~~~~~~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~ 79 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV--PADEILTHRVIWSFFFMVVLMSIC-RQWSYLKTLIQTPQKI-FMLAVS 79 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC--CHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHcCHHHH-HHHHHH
Confidence 45689999999999999999999764 556 999999999999988777665432 2111100 1111122 223355
Q ss_pred HHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheee
Q 015299 268 IVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 268 ~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
.++.++.+.++++++++.+++.++++.++.|++..++++++++|+++..+++|.++.++|+.++.
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 56677889999999999999999999999999999999999999999999999999999988765
No 49
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.96 E-value=4.9e-09 Score=96.98 Aligned_cols=136 Identities=10% Similarity=0.132 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCC---cccccccchh-HHHHHHHHH
Q 015299 193 LGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKP---SVWQIGWDMN-LLAAAYAGI 268 (409)
Q Consensus 193 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~g~ 268 (409)
.|..+.++++++|+...+..|. ..+. +|.+..+++++++.+.+.+......+.. ..+....... +..+...|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~--~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL--PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC--CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 4889999999999999999997 4556 9999999999999888776654332210 1111111112 334445555
Q ss_pred HHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheee
Q 015299 269 VTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 269 ~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
+ ..+++.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.++.
T Consensus 79 ~-~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 L-IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred H-HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 4 56889999999999999999999999999999999999999999999999999999987654
No 50
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.96 E-value=1.8e-08 Score=95.13 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVID 93 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 93 (409)
..|.+++++++++|+...++.|.. .++.++....+ ..+.+.+.+..... .......++..|..++..++. .++.
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIKYFLS-PQPAMVFSLPAIIKLLLAAAA-MGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHHHHHh-cCccccCCHHHHHHHHHHHHH-HHHH
Confidence 468999999999999999999998 46677765433 22333333332232 211123566778777777755 4889
Q ss_pred HHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 94 QNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 94 ~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
+.++++++++.+++.++++.++.|++..++++++++|+++.. +++|.++.+.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999999999 79999999999988864
No 51
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.93 E-value=3e-08 Score=95.59 Aligned_cols=137 Identities=8% Similarity=0.088 Sum_probs=104.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCh-HHHHHHHHHHHHHHHHHHHHHhhhccC----CCCCHHHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSLNRGMSH-YVLVVYRHAFATAVIAPFAFFLERKAQ----PKITFKVFMQIFVLALL 88 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~r~~~a~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 88 (409)
..|.+++++++++|+...++.|... ...++ ...+++...++.+.+.+......+... ...+.. ...++..++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIM-SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 4588999999999999999999885 45544 456667777766666555544332111 112222 2223344444
Q ss_pred HHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHh
Q 015299 89 GPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLY 159 (409)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~ 159 (409)
..+.+.++++++++.+++.+++..++.|++++++++++++|++++. +++|.++.+.|+.++...
T Consensus 266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWG 329 (358)
T ss_pred -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhh
Confidence 3678889999999999999999999999999999999999999999 799999999999998753
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.83 E-value=4.5e-08 Score=79.86 Aligned_cols=122 Identities=16% Similarity=0.161 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhH
Q 015299 193 LGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSS 272 (409)
Q Consensus 193 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 272 (409)
.|.++.+++.++.+...++.|+..++. ........ . . ...... . .....+++|+++.+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~--g~~~~~~~-~----~-~~~~~~-----------~---~p~~~i~lgl~~~~ 59 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRL--PLLSHAWD-F----I-AALLAF-----------G---LALRAVLLGLAGYA 59 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhC--CCccchhH-H----H-HHHHHH-----------h---ccHHHHHHHHHHHH
Confidence 477888999999999999999988776 32221111 0 0 000010 0 11225667888899
Q ss_pred HHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHH--HhccccchhhhhhHHHHHhhhheeeeccc
Q 015299 273 ISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSF--ILAENIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 273 ~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~--~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
+++.+|.+++++.+++.+.++..+.+++..+.++. ++||++|+.+++|.++|++|++++.+.++
T Consensus 60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999988888888885 89999999999999999999999876444
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.82 E-value=1.5e-07 Score=89.10 Aligned_cols=137 Identities=15% Similarity=0.219 Sum_probs=107.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCC---hHHHHHHHHHHHHHHHHHHHHHhhhc-----cCCCCCHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSLNRGMS---HYVLVVYRHAFATAVIAPFAFFLERK-----AQPKITFKVFMQIFVL 85 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~r~~~a~i~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 85 (409)
..|.+++++++++|+...++.|... +..+ .....++-..++.+.+.......... .....+...|..++..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIM-SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 4699999999999999999999873 3332 23333444444443333332222211 1123567888999999
Q ss_pred HHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 86 ALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
+++...+.+.++++++++.+++.++.+..+.|++..++++++++|+++.. +++|.++.++|+.+..
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence 99998999999999999999999999999999999999999999999999 7999999999998876
No 54
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.75 E-value=2.8e-07 Score=78.09 Aligned_cols=133 Identities=19% Similarity=0.311 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhC------CCChHHHHHHHHHHHHHHHHHHHHHhhhccCCC----C-------CHHH
Q 015299 16 PYFAMISLQFGYAGMNIITKVSLNR------GMSHYVLVVYRHAFATAVIAPFAFFLERKAQPK----I-------TFKV 78 (409)
Q Consensus 16 g~l~~~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~----~-------~~~~ 78 (409)
|.++++.+.++.++..+..|..+.+ ..++.++..+-...+.+++.+.+...++....+ . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5788999999999999999998844 799999999999999999999887755432110 0 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHH
Q 015299 79 FMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMI 155 (409)
Q Consensus 79 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~l 155 (409)
+..++..|+++ ...+...+..++++++-..+++.....+++.++++++++|+++.. +++|++++++|+++
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 56666677776 888999999999999999999999999999999999999999999 79999999999875
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.74 E-value=8.3e-08 Score=91.00 Aligned_cols=139 Identities=18% Similarity=0.227 Sum_probs=107.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhC--CCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCC---------CH-HHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNR--GMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKI---------TF-KVFM 80 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~---------~~-~~~~ 80 (409)
+..|.+++++++++|+...+..|... + +.++..+.++....+.+.++|+....+....... .. ..+.
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAM-TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT 221 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence 45699999999999999999999985 5 7999999999999999999998765332110000 00 1111
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 81 QIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 81 ~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
..+..+.......+.+++++++++++..++++..+.|++++++++++++|+++.. +++|..+.++|+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence 1223333222344467778999999999999999999999999999999999999 79999999999999874
No 56
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.68 E-value=6.4e-09 Score=91.11 Aligned_cols=276 Identities=18% Similarity=0.197 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHH
Q 015299 15 KPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQ 94 (409)
Q Consensus 15 ~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (409)
..++.+++-++.||+...+.... +-.|.+...---+-+.++-+.+++. .+ |..+++.+..-++.|.+- ..++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~~---p~~T~~~~iv~~isG~~W-s~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-VS---PELTLTIFIVGFISGAFW-SFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-ec---CccchhhHHHHHHhhhHh-hhhh
Confidence 46788899999999999887665 4556665544433444443333333 22 556677777767777665 9999
Q ss_pred HHHHhhhcccCchhhhhhc-chhHHHHHHHHHHHhhhhcccccccccchhh---hHHHHHHHHHHHHHhcCCcccccccc
Q 015299 95 NFYYAGLKFTSPTFSCAMS-NMLPAMTFVMAVICRMEKINMKKVRCQAKVV---GTAVTVAGAMIMTLYKGPIVELFWTQ 170 (409)
Q Consensus 95 ~~~~~al~~~~~~~~~ii~-~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~---~~~i~~~Gv~li~~~~~~~~~~~~~~ 170 (409)
...+.|+++++++.+..+. .++-+-+.+++.+.++|--+..+ .++ ++++.++|+.+-...+ +
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~---------~ 139 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQD---------R 139 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeec---------c
Confidence 9999999999999999996 47788889999999999666552 222 2333333443333111 0
Q ss_pred CCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 015299 171 HAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPS 250 (409)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (409)
++....+.++...|....+.+.+.|-.|.++.+... . +.+....-+...+.+..+.+.. ...+ .
T Consensus 140 ----------~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v--~g~saiLPqAiGMv~~ali~~~-~~~~-~ 203 (288)
T COG4975 140 ----------NNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V--DGLSAILPQAIGMVIGALILGF-FKME-K 203 (288)
T ss_pred ----------ccccccChHhhhhheeeeeeeccceeeeEeeecccc--c--cchhhhhHHHHHHHHHHHHHhh-cccc-c
Confidence 011122345567899999999999999999966543 2 4444444444433333333333 2211 1
Q ss_pred ccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhh----hhhHHHHHh
Q 015299 251 VWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGS----VLGAILIVV 326 (409)
Q Consensus 251 ~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~----~iG~~li~~ 326 (409)
......|..+ ..|++ -.+++..+..+-++.+.++.=.+.-+..+++.+-+.++++|+=|..+ ++|.+++++
T Consensus 204 ---~~~K~t~~ni-i~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivv 278 (288)
T COG4975 204 ---RFNKYTWLNI-IPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVV 278 (288)
T ss_pred ---chHHHHHHHH-hhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHH
Confidence 1112233333 34543 46788888889999999999999999999999999999999888664 678889988
Q ss_pred hhheeee
Q 015299 327 GLYSVLW 333 (409)
Q Consensus 327 g~~l~~~ 333 (409)
|.++...
T Consensus 279 gai~lg~ 285 (288)
T COG4975 279 GAILLGI 285 (288)
T ss_pred Hhhhhhe
Confidence 8766543
No 57
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.64 E-value=7.7e-08 Score=77.16 Aligned_cols=107 Identities=14% Similarity=0.238 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHH
Q 015299 229 LMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFI 308 (409)
Q Consensus 229 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~ 308 (409)
+...++.+..........+....+.......+...+..|+++...++.++.+++++.++ .++++..+.|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555432221111111112345555666776666889999999999995 88899999999999999999
Q ss_pred hccccchhhhhhHHHHHhhhheeeeccc
Q 015299 309 LAENIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 309 ~~e~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
++|+++..+++|.+++++|++++.+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999998877543
No 58
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.62 E-value=8.2e-08 Score=87.78 Aligned_cols=279 Identities=14% Similarity=0.204 Sum_probs=165.9
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHH
Q 015299 11 LETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGP 90 (409)
Q Consensus 11 ~~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 90 (409)
.++.+|.++++.+.++.|.+..+-|..+.+ .... -.+........ .+. +.++.|.+.+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~~--------~~ra~~gg~~y-l~~--~~Ww~G~ltm 74 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGAS--------GLRAGEGGYGY-LKE--PLWWAGMLTM 74 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhhh--------cccccCCCcch-hhh--HHHHHHHHHH
Confidence 345689999999999999999999998522 1100 00001111111 122 4566778888
Q ss_pred HHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCcccccccc
Q 015299 91 VIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQ 170 (409)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~ 170 (409)
.++....|.|+.+.|.+..+.+..++-++.++++..+++||++.. ..+|++++++|-.+++. ..|...
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~-haP~e~----- 142 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI-HAPKEQ----- 142 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE-ecCccc-----
Confidence 889999999999999999999999999999999999999999999 79999999999888873 222210
Q ss_pred CCCCCCCCCcCcCCC-CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhC-CCchhHHHHHHHHHHHHHHH-------H
Q 015299 171 HAHPHDKSDATTSTA-SSEKDWFLGSIFLIIATLAWASLFVLQTKALETYK-NHQLSLTSLMCFVGTLQAIA-------V 241 (409)
Q Consensus 171 ~~~~~~~~~~~~~~~-~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~-------~ 241 (409)
+- .+.....+ ..+.. .+.....+...++. -.... .++++ .+.+.+......+|+....- +
T Consensus 143 ---~i--~t~~el~~~~~~~~-Fliy~~~iil~~~i--l~~~~---~p~~g~tnilvyi~i~s~iGS~tV~svKalg~ai 211 (335)
T KOG2922|consen 143 ---EI--ESVEEVWELATEPG-FLVYVIIIILIVLI--LIFFY---APRYGQTNILVYIGICSLIGSLTVMSVKALGIAI 211 (335)
T ss_pred ---cc--ccHHHHHHHhcCcc-HHHHHHHHHHHHHH--Hheee---cccccccceeehhhHhhhhcceeeeeHHHHHHHH
Confidence 00 00000000 00011 11111111111111 11111 12221 14444444444443322111 1
Q ss_pred HHHhcCCCcccccccchhHHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhh-HHHHHHHHHHHHhccccch-----
Q 015299 242 TFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPL-MMIIVAIMGSFILAENIYL----- 315 (409)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l-~pv~a~l~~~~~~~e~~~~----- 315 (409)
-..+.+. .+...+..|..++.+.. |...-....+.|++..+++.++++.|+ -..++++.+.++|+|.-..
T Consensus 212 klt~~g~---~ql~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i 287 (335)
T KOG2922|consen 212 KLTFSGN---NQLFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI 287 (335)
T ss_pred HHHhcCC---cccccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 1111111 12222234555554444 333444555899999999999988887 5667788888899885432
Q ss_pred -hhhhhHHHHHhhhheeeeccccc
Q 015299 316 -GSVLGAILIVVGLYSVLWGKHKE 338 (409)
Q Consensus 316 -~~~iG~~li~~g~~l~~~~~~~~ 338 (409)
....|+..++.|+.+....|..+
T Consensus 288 ~~~~~Gf~ti~~G~flL~~~kd~~ 311 (335)
T KOG2922|consen 288 AGELCGFVTIFLGIFLLHRTKDME 311 (335)
T ss_pred HHHHHhHHHhhheeeEeeeecccc
Confidence 36889999999999886554433
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.62 E-value=1.2e-06 Score=84.74 Aligned_cols=139 Identities=13% Similarity=0.199 Sum_probs=102.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhC------CCChHHHHHHHHHHHHHHHHHHHHHhhhccC-----------CCCC
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNR------GMSHYVLVVYRHAFATAVIAPFAFFLERKAQ-----------PKIT 75 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~-----------~~~~ 75 (409)
+..|.++++++.++|+...+..|..+.+ ..++.....+...+++++++|+....+.... ....
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 4679999999999999999999998632 2567767777778888888888764321100 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHH
Q 015299 76 FKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMI 155 (409)
Q Consensus 76 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~l 155 (409)
+......++.+.+...+.+.+.+++++++++...++...+.|+++.++++++++|+++.. +++|.++.++|+.+
T Consensus 272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l 345 (350)
T PTZ00343 272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL 345 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence 111111222222222444444557999999999999999999999999999999999999 79999999999988
Q ss_pred HH
Q 015299 156 MT 157 (409)
Q Consensus 156 i~ 157 (409)
..
T Consensus 346 Ys 347 (350)
T PTZ00343 346 YS 347 (350)
T ss_pred Hh
Confidence 64
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.61 E-value=7.2e-07 Score=70.99 Aligned_cols=70 Identities=17% Similarity=0.136 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 82 IFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
....++++.+++..++.++++..|++.+..+.++.++++.+++++++|||++++ +++|+.+.++|++++.
T Consensus 39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 334444666889999999999999999999999999999999999999999999 7999999999999886
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.52 E-value=1.5e-06 Score=81.80 Aligned_cols=128 Identities=15% Similarity=0.148 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHH----HHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHA----FATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLG 89 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 89 (409)
.+|+++.+++++.|+...+..|.. +.+|...++.... .+.+++.++ + +.++. ..+..+..++.|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~----~-~~~~~-~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH----I-LAKPL-KKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH----h-cccch-HHHHHHHHHHHHHHH
Confidence 679999999999999999999986 3788888666655 333333332 1 11222 234455566688884
Q ss_pred HHHHHHHHHhhhc-ccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchh----hhHHHHHHHHHHHH
Q 015299 90 PVIDQNFYYAGLK-FTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKV----VGTAVTVAGAMIMT 157 (409)
Q Consensus 90 ~~~~~~~~~~al~-~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~----~~~~i~~~Gv~li~ 157 (409)
.+.+.+|+.+.+ +.+++.+.++.+..|+...+++++++||+.+++ ++ +|.++.+.|+.++.
T Consensus 222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 999999999999 999999999999999999999999999999999 69 99999999998875
No 62
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.51 E-value=4e-06 Score=78.48 Aligned_cols=133 Identities=13% Similarity=0.224 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVV-YRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVI 92 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (409)
..|.++.+.++++|+...+..|... ..++..... +..........+.... ... .....+.+......|+++...
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFLS--GFG-APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHhc--ccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999883 566666666 3433222222222211 111 335678899999999999667
Q ss_pred HHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 93 DQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 93 ~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
.+.+++++++..+++..+++..+.|++..++++++++|+++.. +++|+.+.+.|+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~ 286 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999 7999999999998886
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.37 E-value=1.4e-06 Score=69.40 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=61.3
Q ss_pred HHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheee
Q 015299 266 AGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 266 ~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
.++++..+++.++..++++.+.+++-.+.++.++++.++++++|||++++.+++|.+++++|++++.
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3445677899999999999999999999999999999999999999999999999999999987654
No 64
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.34 E-value=8.3e-06 Score=66.57 Aligned_cols=118 Identities=14% Similarity=0.207 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHH
Q 015299 15 KPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQ 94 (409)
Q Consensus 15 ~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (409)
+++++++++.++-+...++.|... ++.+........ ...+. . . .....++..|++..+++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~-~~~g~~~~~~~~--~~~~~----~-~-----------~~p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGM-SRLPLLSHAWDF--IAALL----A-F-----------GLALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH-hhCCCccchhHH--HHHHH----H-H-----------hccHHHHHHHHHHHHHHH
Confidence 478899999999999999999995 444433322211 00000 0 0 011225677787889999
Q ss_pred HHHHhhhcccCchhhhhhcchhHHHHHHHHHH--HhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 95 NFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVI--CRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 95 ~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l--~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
.++.++++..+++.+..+.+..++++.+.++. +++|++++. +++|+++.++|++++.
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999889888885 899999999 7999999999999986
No 65
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.27 E-value=4.5e-06 Score=75.71 Aligned_cols=139 Identities=14% Similarity=0.160 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc-cccchhHHHHHHHHHHH
Q 015299 192 FLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQ-IGWDMNLLAAAYAGIVT 270 (409)
Q Consensus 192 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~ 270 (409)
..|+++++.|-+.|+..-.+.|.+ +.. ++.+...+..+.+............+....+. ...+..+......++.
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l- 81 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL- 81 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence 579999999999999998887775 555 88899999998888888777664433222222 2223355556665654
Q ss_pred hHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeec
Q 015299 271 SSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWG 334 (409)
Q Consensus 271 ~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 334 (409)
.....+++.++.++.....++.-.+++|.+.+++|.++++|+++..|++..++..+|+....+.
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999999999999999998766543
No 66
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.25 E-value=2.3e-05 Score=69.48 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=118.4
Q ss_pred chhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHH
Q 015299 10 FLETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLG 89 (409)
Q Consensus 10 ~~~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 89 (409)
.--+..|..+++.+..+|+..-+..|.. .+..+.-.-+..-+.+++++.+|+........ -.++.-...-+..++++
T Consensus 143 ~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~-g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlS 219 (292)
T COG5006 143 WSLDPVGVALALGAGACWALYIVLGQRA-GRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLS 219 (292)
T ss_pred CcCCHHHHHHHHHHhHHHHHHHHHcchh-cccCCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHh
Confidence 3345689999999999999999999998 44677777888899999999999987543322 23567777788889999
Q ss_pred HHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 90 PVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
.++-+.+-..+++.+|.....++.++.|.+.++.++++++|+++.. ||+++...+.+..-..
T Consensus 220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGST 281 (292)
T ss_pred cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhccc
Confidence 8999999999999999999999999999999999999999999999 8999988877766444
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.19 E-value=3e-05 Score=73.64 Aligned_cols=142 Identities=14% Similarity=0.058 Sum_probs=112.7
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCC--CHHHHHHHHHHHHH
Q 015299 11 LETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKI--TFKVFMQIFVLALL 88 (409)
Q Consensus 11 ~~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~ 88 (409)
.+..+|-++++.+++++|..+++-+... ++.+..++...-.+.++++..+.+...+++..... +++....++..+++
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~ 242 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC 242 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence 3567999999999999999999999985 77899999988888898888887776666543333 44444444444443
Q ss_pred HHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhc
Q 015299 89 GPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYK 160 (409)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~ 160 (409)
. +..+.+.-..++.+++....+=.-++.+++++++.+++++++++. .++|.++.++|.++....+
T Consensus 243 l-f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 243 L-FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLAE 307 (334)
T ss_pred H-HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEccC
Confidence 3 566666677888888888877778899999999999999999998 6999999999999987433
No 68
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.98 E-value=0.00013 Score=69.17 Aligned_cols=131 Identities=18% Similarity=0.124 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHhhhhCCC--chhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHHHHHHHHH
Q 015299 203 LAWASLFVLQTKALETYKNH--QLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQGL 280 (409)
Q Consensus 203 ~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~ 280 (409)
.++..+.+.++++.++.... +..+++.++....+...+........ ......+...+..++ ...++..+.+.
T Consensus 10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~ 83 (303)
T PF08449_consen 10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP-----KSRKIPLKKYAILSF-LFFLASVLSNA 83 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc-----CCCcChHHHHHHHHH-HHHHHHHHHHH
Confidence 34445678888888766434 77888888888888777766533311 111123334444454 45678889999
Q ss_pred HHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecccccc
Q 015299 281 VIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKHKEK 339 (409)
Q Consensus 281 al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~ 339 (409)
++++.+.....++...+|+..+++++++++++.+..++++.+++.+|+++....+.++.
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~ 142 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS 142 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence 99999999999999999999999999999999999999999999999999987755443
No 69
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.97 E-value=3.4e-06 Score=75.14 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=99.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHH
Q 015299 190 DWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIV 269 (409)
Q Consensus 190 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 269 (409)
...+|..+..++ ..+...++..++.... +|.+.....+.+-.+...|..+.... ..+......-|+ +.=|+.
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~--~v~gp~g~R~~L--iLRg~m 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQ--PVIGPEGKRKWL--ILRGFM 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEee--eeecCCCcEEEE--Eeehhh
Confidence 446788888888 8888888888886654 67777666655555555554442221 112222222232 222332
Q ss_pred HhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccc
Q 015299 270 TSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 270 ~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
+..+.++.++++++.+-+.+.++....|+++++++|++++|+.|.+..+|..+.+.|++++.+..-
T Consensus 107 -G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 107 -GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred -hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 345677788999999999999999999999999999999999999999999999999999987544
No 70
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.96 E-value=4.8e-05 Score=71.59 Aligned_cols=122 Identities=16% Similarity=0.240 Sum_probs=89.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHH
Q 015299 189 KDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGI 268 (409)
Q Consensus 189 ~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 268 (409)
.+..+|..+++.++++.+....++|+...+. +....-. .. .......+..|+. |.
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~--~~~~~~~------------------~~-~~~~~l~~~~W~~----G~ 57 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRL--PRGSLRA------------------GS-GGRSYLRRPLWWI----GL 57 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcccccc------------------cc-hhhHHHhhHHHHH----HH
Confidence 3568999999999999999999999987765 2100000 00 0000001112222 22
Q ss_pred HHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecc
Q 015299 269 VTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGK 335 (409)
Q Consensus 269 ~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 335 (409)
+...++..+...++...+++.++++..+..++..+++.++++|+++...++|+++++.|..+.....
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 2334566777889999999999999999999999999999999999999999999999987766543
No 71
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.90 E-value=0.0039 Score=58.47 Aligned_cols=299 Identities=14% Similarity=0.119 Sum_probs=178.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHh-hhcc----CCCCCHHHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFL-ERKA----QPKITFKVFMQIFVLALL 88 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~-~~~~----~~~~~~~~~~~~~~~g~~ 88 (409)
..|+++..+++++-|...+-.|.. ++.+ +|..+.-..+-.-++.|+.... .-+. ....+........+.|++
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv--k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l 82 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV--KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL 82 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc--CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence 579999999999999999999998 4443 4444444444444444543321 1111 112344667777778887
Q ss_pred HHHHHHHHHHhhhcccCchhhh-hhcchhHHHHHHHHHHHhhhhcc-cccccccchhhhHHHHHHHHHHHHHhcCCcccc
Q 015299 89 GPVIDQNFYYAGLKFTSPTFSC-AMSNMLPAMTFVMAVICRMEKIN-MKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVEL 166 (409)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~-ii~~~~pi~~~lls~l~l~e~~~-~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~ 166 (409)
- .++...|=.+++|+..+..+ +...+..++-.++-.++.++--. ..++-.+.-++|++++++|+.++...+.....
T Consensus 83 W-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~- 160 (344)
T PF06379_consen 83 W-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK- 160 (344)
T ss_pred H-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh-
Confidence 5 88999999999999988764 44567777777777776543100 11122344688999999999999854321100
Q ss_pred ccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh------hhhCCCchhH----HHHHHHHHHH
Q 015299 167 FWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKAL------ETYKNHQLSL----TSLMCFVGTL 236 (409)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~------~~~~~~~~~~----~~~~~~~~~i 236 (409)
+...+..+.+..+|.+.++++++..|..+.-...-. ...+.+|... ....+.-+.+
T Consensus 161 --------------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~ 226 (344)
T PF06379_consen 161 --------------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFI 226 (344)
T ss_pred --------------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHH
Confidence 000112345677999999999999999988764321 1111222221 2233333444
Q ss_pred HHHHHHHHhcC---CCc---cccccc---chhHHHHHHHHHHHhHHHHHHHHHHHhhcCce----EeeechhhHHHHHHH
Q 015299 237 QAIAVTFVIEH---KPS---VWQIGW---DMNLLAAAYAGIVTSSISYFVQGLVIKKRGPV----FATAFSPLMMIIVAI 303 (409)
Q Consensus 237 ~~~~~~~~~~~---~~~---~~~~~~---~~~~~~l~~~g~~~~~~~~~l~~~al~~~~~~----~~s~~~~l~pv~a~l 303 (409)
.-+...+.... +.. ++.... ..++...+..|++ -...+++|..+-.+.++. --.+.+.+..+++-+
T Consensus 227 tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snv 305 (344)
T PF06379_consen 227 TNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNV 305 (344)
T ss_pred HHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHH
Confidence 44555443221 111 111111 1233333444443 456667777777777743 335677888888999
Q ss_pred HHHHHhccc------cchhhhhhHHHHHhhhheeee
Q 015299 304 MGSFILAEN------IYLGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 304 ~~~~~~~e~------~~~~~~iG~~li~~g~~l~~~ 333 (409)
++. +++|. +-..-++|.++++.++.++-+
T Consensus 306 wGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 306 WGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 988 45552 223458888888888766543
No 72
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.84 E-value=0.00028 Score=58.45 Aligned_cols=132 Identities=12% Similarity=0.145 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHH
Q 015299 194 GSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSI 273 (409)
Q Consensus 194 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 273 (409)
..++++++++.-++....+.++.++. .+|....+..+..+.+.+.....+.++. .........|+..+ .|+ .+..
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~-gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~ 76 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKAL-GSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVF 76 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHH
Confidence 35788999999999999999998887 2499999999999999988887755543 22222222344433 344 3456
Q ss_pred HHHHHHHHHhhcCceEeeechhh-HHHHHHHHHHH-H---hccccchhhhhhHHHHHhhhhe
Q 015299 274 SYFVQGLVIKKRGPVFATAFSPL-MMIIVAIMGSF-I---LAENIYLGSVLGAILIVVGLYS 330 (409)
Q Consensus 274 ~~~l~~~al~~~~~~~~s~~~~l-~pv~a~l~~~~-~---~~e~~~~~~~iG~~li~~g~~l 330 (409)
...+..+.+++.+++....+... +.+.+.++|.+ + -++++++.+++|.+++++|+++
T Consensus 77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 67777888999999877665554 78888889987 2 3568899999999999999864
No 73
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.84 E-value=4.9e-05 Score=60.89 Aligned_cols=69 Identities=20% Similarity=0.343 Sum_probs=58.5
Q ss_pred HHHHhHHHHHHHHHHHhhcCceEeeec-hhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecc
Q 015299 267 GIVTSSISYFVQGLVIKKRGPVFATAF-SPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGK 335 (409)
Q Consensus 267 g~~~~~~~~~l~~~al~~~~~~~~s~~-~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 335 (409)
.+++.++++.++..++++.+.+.+=.+ ..+..+.+.+.++++|+|++++.+++|.++|++|++......
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344557889999999999998776444 568889999999999999999999999999999998886544
No 74
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.77 E-value=0.0003 Score=64.32 Aligned_cols=118 Identities=15% Similarity=0.108 Sum_probs=89.3
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHH
Q 015299 11 LETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGP 90 (409)
Q Consensus 11 ~~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 90 (409)
.+..+++++++++.+.|....++.|.. +++++...+-..+-..+.-..+....++ +...|..++-++.|++-
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~w- 205 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLIW- 205 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcccc----cccccchHHhhHHHHHH-
Confidence 345689999999999999999998886 5788777765544333333333333211 12223444556777776
Q ss_pred HHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhccccc
Q 015299 91 VIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKK 136 (409)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~ 136 (409)
..++.+++.|.+...++.+..+..+..++..+-+.+++||+=+++|
T Consensus 206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke 251 (269)
T PF06800_consen 206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE 251 (269)
T ss_pred HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence 8999999999999999999999999999999999999999888773
No 75
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.60 E-value=0.00096 Score=52.53 Aligned_cols=64 Identities=17% Similarity=0.161 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhhhcccCchhhhhh-cchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHH
Q 015299 87 LLGPVIDQNFYYAGLKFTSPTFSCAM-SNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIM 156 (409)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li 156 (409)
+++..++..+...+++++|++.+..+ ....-+.+.+.++++++|++++. +++++.+.++|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 33447888889999999999998655 56888999999999999999999 799999999999886
No 76
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.60 E-value=0.00013 Score=57.73 Aligned_cols=68 Identities=13% Similarity=0.268 Sum_probs=57.2
Q ss_pred HHHhHHHHHHHHHHHhhcCceEee-echhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecc
Q 015299 268 IVTSSISYFVQGLVIKKRGPVFAT-AFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGK 335 (409)
Q Consensus 268 ~~~~~~~~~l~~~al~~~~~~~~s-~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 335 (409)
+++..+++.++..++++.+.+.+= +-.-+..+.+.+.++++|+|++++.+++|.++|++|++..+...
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 345578889999999999887663 33567888899999999999999999999999999999886543
No 77
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.56 E-value=0.0011 Score=51.44 Aligned_cols=66 Identities=18% Similarity=0.218 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHhhhcccCchhhhhh-cchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 86 ALLGPVIDQNFYYAGLKFTSPTFSCAM-SNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
.++++.+++.++-.+++++|++.+..+ .....+.+.+.++++++|+++.. +++++.+.++|++.+-
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence 344457888899999999999997555 67899999999999999999999 7999999999999875
No 78
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.51 E-value=0.00033 Score=65.79 Aligned_cols=138 Identities=13% Similarity=0.205 Sum_probs=113.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhh---hCCCChHHHHHHHHHHHHHHHH-HHHHHhhhccC----C-CCCHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSL---NRGMSHYVLVVYRHAFATAVIA-PFAFFLERKAQ----P-KITFKVFMQIF 83 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~---~~~~~~~~~~~~r~~~a~i~l~-~~~~~~~~~~~----~-~~~~~~~~~~~ 83 (409)
+..|...++++.+..+...++.|..+ ...++++....+..-++.+.++ |+....++... . ..+...+. .+
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HH
Confidence 57899999999999999999999997 3469999999999889998888 88766444322 1 23344333 34
Q ss_pred HHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 84 VLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 84 ~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
..+++. .+.|...|..+..+++-..++....--+++.+.+++++++++++. +..|.+++++|+.+-..
T Consensus 240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHHH
Confidence 444666 777888899999999999999999999999999999999999999 79999999999998763
No 79
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.48 E-value=0.0014 Score=52.60 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHhhhcccCchhhhhh-cchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 85 LALLGPVIDQNFYYAGLKFTSPTFSCAM-SNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 85 ~g~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
..++.++++..++..+++++|++.+..+ ....-+.+.+++.++++|++++. +++|+.+.++|++++-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 3455557889999999999999998777 46899999999999999999999 79999999999988853
No 80
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.47 E-value=0.0017 Score=53.69 Aligned_cols=130 Identities=9% Similarity=0.088 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015299 17 YFAMISLQFGYAGMNIITKVSLNRGMS-HYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQN 95 (409)
Q Consensus 17 ~l~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (409)
+++.+.+..+.+....+.-.+ .+..+ |+..+++-+.++++++..+....+++.....+ +..++...-|+++ +....
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQL-GKALGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence 466777778888888876666 35565 99999999999999998888776654322222 2233445578887 88888
Q ss_pred HHHhhhcccCchhhhhhcchhH-HHHHHHHHH----HhhhhcccccccccchhhhHHHHHHHHHH
Q 015299 96 FYYAGLKFTSPTFSCAMSNMLP-AMTFVMAVI----CRMEKINMKKVRCQAKVVGTAVTVAGAMI 155 (409)
Q Consensus 96 ~~~~al~~~~~~~~~ii~~~~p-i~~~lls~l----~l~e~~~~~~~~~~~~~~~~~i~~~Gv~l 155 (409)
+..++...++++.++.+.-+.- +...++..+ .-++++++. +++|+++.++|+++
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 8999999999999887765444 444555554 346778877 79999999999864
No 81
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.44 E-value=0.0012 Score=52.00 Aligned_cols=63 Identities=10% Similarity=0.179 Sum_probs=54.8
Q ss_pred HhHHHHHHHHHHHhhcCceEe-eechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheee
Q 015299 270 TSSISYFVQGLVIKKRGPVFA-TAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 270 ~~~~~~~l~~~al~~~~~~~~-s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
+..+++.+...++|+.+..++ ++-.-+..+.+.+.++++|+|++++.+++|.++|+.|++..+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 456889999999999988665 566668888999999999999999999999999999998764
No 82
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.44 E-value=0.00065 Score=53.71 Aligned_cols=67 Identities=10% Similarity=0.205 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHhhhcccCchhhhhh-cchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 86 ALLGPVIDQNFYYAGLKFTSPTFSCAM-SNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
.++++.++..++..+++.+|++.+..+ ..+.-+.+.++++++++|++++. +++|+.+.++|++++-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 445557888888999999999998777 56889999999999999999999 79999999999999863
No 83
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.40 E-value=0.0003 Score=54.49 Aligned_cols=65 Identities=22% Similarity=0.405 Sum_probs=56.7
Q ss_pred HhHHHHHHHHHHHhhcCceEe-eechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeec
Q 015299 270 TSSISYFVQGLVIKKRGPVFA-TAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWG 334 (409)
Q Consensus 270 ~~~~~~~l~~~al~~~~~~~~-s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 334 (409)
+..+++.+...++|+.+..++ ++-.-+..+.+.+.++++|+|+.+..+++|.+++++|++..+..
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 346788999999999988654 67777888999999999999999999999999999999887654
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.37 E-value=0.00043 Score=54.19 Aligned_cols=65 Identities=20% Similarity=0.210 Sum_probs=56.4
Q ss_pred HHhHHHHHHHHHHHhhcCceEe-eechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeee
Q 015299 269 VTSSISYFVQGLVIKKRGPVFA-TAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 269 ~~~~~~~~l~~~al~~~~~~~~-s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 333 (409)
++..+++.+...++|+.+...+ ++-.-+..+.+.+.++++|+|++++.+++|.++|++|++..+.
T Consensus 37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3456889999999999988665 6666688899999999999999999999999999999988754
No 85
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.34 E-value=0.00038 Score=54.91 Aligned_cols=110 Identities=13% Similarity=0.135 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015299 21 ISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAG 100 (409)
Q Consensus 21 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 100 (409)
++.+++||..+++.|.. +.+.++..-.. |..--... . .++|.+. +.-++ +-.+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g-~~~~~~~~~~~-~~~~~~~~-----L-----------l~n~~y~-ipf~l-Nq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRG-SSGLEKVKASL-QLLQEIKF-----L-----------LLNPKYI-IPFLL-NQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHH-HhhcCCccchH-HHHHHHHH-----H-----------HHhHHHH-HHHHH-HHHHHHHHHHH
Confidence 35678999999999999 45555544331 21111111 0 1122222 22233 36677889999
Q ss_pred hcccCchhhhhhc-chhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHH
Q 015299 101 LKFTSPTFSCAMS-NMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIM 156 (409)
Q Consensus 101 l~~~~~~~~~ii~-~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li 156 (409)
+...+.+.+.++. +++=+||++.++++.+|..+++ .++|+++.++|+.++
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 9999999999995 8899999999988877777777 599999999998764
No 86
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.28 E-value=0.0029 Score=52.41 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHh
Q 015299 192 FLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTS 271 (409)
Q Consensus 192 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 271 (409)
.+..+.+++++++-.+......++.+.. .+|.......+.++++.+..+.++.++ ...+.......|+..+. |++ .
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~-~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~~G-G~l-G 79 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYL-GSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAWIG-GLL-G 79 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHHHc-cch-h
Confidence 5678889999999999999999988777 468888888888988888887775333 23333223334544432 333 3
Q ss_pred HHHHHHHHHHHhhcCceE-eeechhhHHHHHHHHHHHHhc----cccchhhhhhHHHHHhhhheeeec
Q 015299 272 SISYFVQGLVIKKRGPVF-ATAFSPLMMIIVAIMGSFILA----ENIYLGSVLGAILIVVGLYSVLWG 334 (409)
Q Consensus 272 ~~~~~l~~~al~~~~~~~-~s~~~~l~pv~a~l~~~~~~~----e~~~~~~~iG~~li~~g~~l~~~~ 334 (409)
.+.-........+.+++. ......-+.+.++++|.+=+. .+++...++|.+++++|+++..+.
T Consensus 80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 343444455566666644 445555688888888887553 578999999999999996655443
No 87
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.23 E-value=0.0024 Score=60.14 Aligned_cols=141 Identities=12% Similarity=0.169 Sum_probs=115.0
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhh-C--CCChHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCHHHHHHHHHH
Q 015299 12 ETSKPYFAMISLQFGYAGMNIITKVSLN-R--GMSHYVLVVYRHAFATAVIAPFAFFLER---KAQPKITFKVFMQIFVL 85 (409)
Q Consensus 12 ~~~~g~l~~~~~~~~~~~~~~~~k~~~~-~--~~~~~~~~~~r~~~a~i~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 85 (409)
+...|-+++++++++||...++.|.-.. + .++--.+.-+-.++..++++|..+.... ....-++..+...++..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 4478999999999999999999998762 2 4666666677778888888876554332 23333455667778888
Q ss_pred HHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 86 ALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
++++.+++.++|.+|.-.+++-.+++-.+++....++.-.++.+.++++. +++|.+..++|-+++..
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI 390 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence 99999999999999999999999999988888888888988889989988 89999999999998874
No 88
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.23 E-value=0.0046 Score=48.39 Aligned_cols=65 Identities=11% Similarity=0.116 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhhcccCchhhhhh-cchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 87 LLGPVIDQNFYYAGLKFTSPTFSCAM-SNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
++++..+..+...+++.+|.+.+..+ .....+.+.++++++++|++++. +++++.+.++|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence 44457888899999999999998665 56899999999999999999999 7999999999999874
No 89
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.14 E-value=0.0067 Score=55.30 Aligned_cols=192 Identities=13% Similarity=0.068 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015299 16 PYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQN 95 (409)
Q Consensus 16 g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (409)
|++..+.+.+++|.+++-.|.. +.-+++.+-++-+...++.-+.+..+.+. ++ -+.+..+-|.+ .+.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v~~~~~~---p~----f~p~amlgG~l-W~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVVNLILGF---PP----FYPWAMLGGAL-WATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHHHHhcCC---Cc----ceeHHHhhhhh-hhcCce
Confidence 5778999999999999999988 45577777766666555555554444221 22 23334445555 488899
Q ss_pred HHHhhhcccCchhhhhhcchhHHHH-HHHHHH-HhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCcccc-------
Q 015299 96 FYYAGLKFTSPTFSCAMSNMLPAMT-FVMAVI-CRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVEL------- 166 (409)
Q Consensus 96 ~~~~al~~~~~~~~~ii~~~~pi~~-~lls~l-~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~------- 166 (409)
+-.-.++.+.++....+-++.-+.+ -..+.+ +++++...- .-....++|++++++|..+...-+.+....
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 9999999999999988866544333 233322 233322211 111224678888888887776533222110
Q ss_pred --ccccCCCCCCCCCcCcCCC-----CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015299 167 --FWTQHAHPHDKSDATTSTA-----SSEKDWFLGSIFLIIATLAWASLFVLQTKALET 218 (409)
Q Consensus 167 --~~~~~~~~~~~~~~~~~~~-----~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~ 218 (409)
..++.++..++...+.+.+ ....+...|..+++++++.|+...+=.....++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 0000000000000000000 112247789999999999999988776665444
No 90
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.11 E-value=0.003 Score=60.20 Aligned_cols=138 Identities=15% Similarity=0.200 Sum_probs=91.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHH--HHH--HHHHhcCCC-cccccccchhHHHHH
Q 015299 190 DWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQ--AIA--VTFVIEHKP-SVWQIGWDMNLLAAA 264 (409)
Q Consensus 190 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~--~~~~~~~~~-~~~~~~~~~~~~~l~ 264 (409)
+...|+++++++++|++.+.+-+|+ .|+. +-..+ |- ..+.+. +.| ...+..++. ......+...+....
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w--~wE~~--W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW--SWETM--WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF 77 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCC--chhHH--HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence 3578999999999999999999888 5555 32222 22 121111 111 111111111 112222333444445
Q ss_pred HHHHHHhHHHHHHHHHHHhhcCceEeeech-hhHHHHHHHHHHHHhcccc---c----hhhhhhHHHHHhhhheeeec
Q 015299 265 YAGIVTSSISYFVQGLVIKKRGPVFATAFS-PLMMIIVAIMGSFILAENI---Y----LGSVLGAILIVVGLYSVLWG 334 (409)
Q Consensus 265 ~~g~~~~~~~~~l~~~al~~~~~~~~s~~~-~l~pv~a~l~~~~~~~e~~---~----~~~~iG~~li~~g~~l~~~~ 334 (409)
..|++ -.+++..+..++++.+.+...++. -++.+.+.+++.+++||.. + ...++|.+++++|+++..+.
T Consensus 78 l~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 78 LFGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 55654 568999999999999998876554 5688999999999999765 2 24688999999999988773
No 91
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.00 E-value=0.002 Score=58.89 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccccc
Q 015299 260 LLAAAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKHKE 338 (409)
Q Consensus 260 ~~~l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 338 (409)
.+.+..-+++ ..+...+.+.++++.+|++..++..+++++++++++++++.+++..||++..+.++|+.++.......
T Consensus 17 ~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 17 TLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 3444444443 56778888999999999999999999999999999999999999999999999999999988765544
No 92
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.93 E-value=0.00028 Score=65.06 Aligned_cols=128 Identities=23% Similarity=0.307 Sum_probs=96.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHH
Q 015299 187 SEKDWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYA 266 (409)
Q Consensus 187 ~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 266 (409)
...++.+|.++++.+++..+...++.||..++. .. ... ...+ ........ ...+.
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~--~~-----------------~~~-ra~~-gg~~yl~~----~~Ww~ 69 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRA--GA-----------------SGL-RAGE-GGYGYLKE----PLWWA 69 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHHH--hh-----------------hcc-cccC-CCcchhhh----HHHHH
Confidence 345667999999999999999999999888776 11 010 1011 11111111 12234
Q ss_pred HHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecccccc
Q 015299 267 GIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKHKEK 339 (409)
Q Consensus 267 g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~ 339 (409)
|.+...++..+.+.+....+++.++++..++.+.+++++..+++|++++...+|+++.++|..++.....+++
T Consensus 70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~ 142 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ 142 (335)
T ss_pred HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence 5556677888888888999999999999999999999999999999999999999999999887776554443
No 93
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.87 E-value=0.0014 Score=59.77 Aligned_cols=134 Identities=20% Similarity=0.187 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHH
Q 015299 194 GSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSI 273 (409)
Q Consensus 194 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 273 (409)
|.+.++.|+++++.+.+=.||. ... |++....+++....+....+.++.+. +.+ . .+.++. |. .-+.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~--p~f---~---p~amlg-G~-lW~~ 67 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DTG--DGFFFQWVMCSGIFLVGLVVNLILGF--PPF---Y---PWAMLG-GA-LWAT 67 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cCC--CcHHHHHHHHHHHHHHHHHHHHhcCC--Ccc---e---eHHHhh-hh-hhhc
Confidence 5678899999999999887764 333 77666666665555555555543221 111 0 111111 11 1233
Q ss_pred HHHHHHHHHhhcCceEeeec-hhhHHHHHHHHHHH-Hhcccc-----chhhhhhHHHHHhhhheeeeccccccc
Q 015299 274 SYFVQGLVIKKRGPVFATAF-SPLMMIIVAIMGSF-ILAENI-----YLGSVLGAILIVVGLYSVLWGKHKEKM 340 (409)
Q Consensus 274 ~~~l~~~al~~~~~~~~s~~-~~l~pv~a~l~~~~-~~~e~~-----~~~~~iG~~li~~g~~l~~~~~~~~~~ 340 (409)
+..+-.-++|..+-...-.+ ...+.+.+...+-+ +||+.+ .+..++|.+++++|..++..-|.+.++
T Consensus 68 gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~ 141 (254)
T PF07857_consen 68 GNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKE 141 (254)
T ss_pred CceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCC
Confidence 44444445555554333222 23456666666654 555433 356899999999999888877665543
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.83 E-value=0.0022 Score=49.26 Aligned_cols=55 Identities=27% Similarity=0.432 Sum_probs=34.3
Q ss_pred HhHHHHHHHHHHHhhcCceEe-eechhhHHHHHHHHHHHHhccccchhhhhhHHHH
Q 015299 270 TSSISYFVQGLVIKKRGPVFA-TAFSPLMMIIVAIMGSFILAENIYLGSVLGAILI 324 (409)
Q Consensus 270 ~~~~~~~l~~~al~~~~~~~~-s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li 324 (409)
+..+++.++..++|+.+.+.+ ++...+..+...+.|+++|||++|+.+++|..+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 556888999999999999888 4556689999999999999999999999999886
No 95
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.82 E-value=0.014 Score=46.06 Aligned_cols=109 Identities=13% Similarity=0.184 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHHHHHHHH
Q 015299 200 IATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQG 279 (409)
Q Consensus 200 ~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~ 279 (409)
+.++.|++.+-+.||..+.. ++..-.. + ...-... .+ ..|-+++ .......+..+|+
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~--~~~~~~~-~-~~~~~~~---Ll--------------~n~~y~i--pf~lNq~GSv~f~ 59 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGL--EKVKASL-Q-LLQEIKF---LL--------------LNPKYII--PFLLNQSGSVLFF 59 (113)
T ss_pred eehHHhcCchHHHHHHHhhc--CCccchH-H-HHHHHHH---HH--------------HhHHHHH--HHHHHHHHHHHHH
Confidence 45788999999999988776 3222221 1 1111111 11 0122222 2223456667888
Q ss_pred HHHhhcCceEeeec-hhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhhee
Q 015299 280 LVIKKRGPVFATAF-SPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSV 331 (409)
Q Consensus 280 ~al~~~~~~~~s~~-~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~ 331 (409)
+.+.+.+-+.+.++ +.+.-+++++.++++.+|..+...++|+++|++|+.+.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 89999999999998 48999999999998888888889999999999998764
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.68 E-value=0.023 Score=52.27 Aligned_cols=141 Identities=10% Similarity=0.116 Sum_probs=114.3
Q ss_pred chhchHHHHHHHHHHHHHHHHHHHHHHhh-hCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCC-----CCCHHHHHHHH
Q 015299 10 FLETSKPYFAMISLQFGYAGMNIITKVSL-NRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQP-----KITFKVFMQIF 83 (409)
Q Consensus 10 ~~~~~~g~l~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~-----~~~~~~~~~~~ 83 (409)
..+...|++++....++=|+.+..-..++ ...++++.+.+.-.+..++........+ ...++ +.++..++-++
T Consensus 167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~ 245 (327)
T KOG1581|consen 167 RENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDIL 245 (327)
T ss_pred CCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHH
Confidence 45677899999999999999988877776 4568999999998888888777764332 22222 23556788889
Q ss_pred HHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 84 VLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 84 ~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
+.+.++ +.++.+.++-++.-++-.-+.|.-+=-+++++++.+.++.+++.. |++|+.+.+.|+.+=.+
T Consensus 246 l~s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 246 LYSTCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHHHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence 999998 888999888888877777777888888999999999999999999 89999999999877553
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.62 E-value=0.002 Score=57.21 Aligned_cols=135 Identities=19% Similarity=0.195 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHhHH
Q 015299 194 GSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTSSI 273 (409)
Q Consensus 194 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 273 (409)
+.+.+++=++.|+..-....|. +..|.+-+.-+.+.+.++.+.+.++ .. +.. +...+..-+..|.+ -.+
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~----GG~p~qQ~lGtT~GALifaiiv~~~-~~--p~~---T~~~~iv~~isG~~-Ws~ 71 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF----GGKPYQQTLGTTLGALIFAIIVFLF-VS--PEL---TLTIFIVGFISGAF-WSF 71 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec----CCChhHhhhhccHHHHHHHHHHhee-ec--Ccc---chhhHHHHHHhhhH-hhh
Confidence 5678888999999877764443 2356666666565555555554442 21 111 11234444455554 458
Q ss_pred HHHHHHHHHhhcCceEeeechh-hHHHHHHHHHHHHhccccchhh----hhhHHHHHhhhheeeecccccc
Q 015299 274 SYFVQGLVIKKRGPVFATAFSP-LMMIIVAIMGSFILAENIYLGS----VLGAILIVVGLYSVLWGKHKEK 339 (409)
Q Consensus 274 ~~~l~~~al~~~~~~~~s~~~~-l~pv~a~l~~~~~~~e~~~~~~----~iG~~li~~g~~l~~~~~~~~~ 339 (409)
++..++.+++..+.+++.++.. .+.+-+.+++++.|||..+..+ .+..+++++|+++..+.++.++
T Consensus 72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk 142 (288)
T COG4975 72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK 142 (288)
T ss_pred hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence 9999999999999999998876 5778889999999999998765 4456788899998887765433
No 98
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.53 E-value=0.045 Score=45.47 Aligned_cols=136 Identities=11% Similarity=0.022 Sum_probs=89.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCC-ChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNRGM-SHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPV 91 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (409)
....+++.+.+..+......+.-.+ .+.. +|....+.-+.++.+++..+.+..+++......++..++.+.-|++| +
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL-~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a 80 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRL-ARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-A 80 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHH-HHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-h
Confidence 4566777788888888887776665 3444 48999999999999888888777433322222234455566677777 6
Q ss_pred HHHHHHHhhhcccCchhhhhhc-chhHHHHHHHHHHHh----hhhcccccccccchhhhHHHHHHHHHHH
Q 015299 92 IDQNFYYAGLKFTSPTFSCAMS-NMLPAMTFVMAVICR----MEKINMKKVRCQAKVVGTAVTVAGAMIM 156 (409)
Q Consensus 92 ~~~~~~~~al~~~~~~~~~ii~-~~~pi~~~lls~l~l----~e~~~~~~~~~~~~~~~~~i~~~Gv~li 156 (409)
..-.........+.++....+. .-+-+..+++..+=. +.+++.. +++|+++.++|+.++
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~ 144 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA 144 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence 6666667777777776665553 344444444443322 3555555 799999999995544
No 99
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.38 E-value=0.028 Score=43.08 Aligned_cols=57 Identities=18% Similarity=0.181 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhhhcccCchhhhhh-cchhHHHHHHHHHHHhhhhcccccccccchhhhHHH
Q 015299 86 ALLGPVIDQNFYYAGLKFTSPTFSCAM-SNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAV 148 (409)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i 148 (409)
.+.++.++..++..+++++|.+.+..+ ..+..+.+.+++.++++|+++.. |++|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 344557888999999999999999666 46999999999999999999999 6888764
No 100
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.17 E-value=0.14 Score=48.45 Aligned_cols=142 Identities=14% Similarity=0.090 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCC--CchhHHHHHHHHHHHHHHHHHHHhcCC---C-----cccccccchhHHH
Q 015299 193 LGSIFLIIATLAWASLFVLQTKALETYKN--HQLSLTSLMCFVGTLQAIAVTFVIEHK---P-----SVWQIGWDMNLLA 262 (409)
Q Consensus 193 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~---~-----~~~~~~~~~~~~~ 262 (409)
.=.+..+...+.++......|...++.|+ .|.+.++..-+.-.+++....+..++. . ..+....+...+-
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 33455555556666666666655443322 566777777777777777776643211 0 0001111112222
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecc
Q 015299 263 AAYAGIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGK 335 (409)
Q Consensus 263 l~~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 335 (409)
+..-++ ..++-+.+++.++.+.+|++..+...++++.+.++..++++++++..||...++.+.|+.++....
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~ 166 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS 166 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence 222222 234556688899999999999999999999999999999999999999999999999999988443
No 101
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.93 E-value=0.026 Score=50.77 Aligned_cols=58 Identities=10% Similarity=0.039 Sum_probs=52.3
Q ss_pred HHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHH
Q 015299 91 VIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAM 154 (409)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~ 154 (409)
+....+..+.+++.+....+....+.++++.+++.++++|+++.. +++|+.+.+.|+.
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~ 220 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF 220 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence 666777889999999999999999999999999999999999999 7999999888764
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.29 E-value=0.18 Score=47.01 Aligned_cols=138 Identities=12% Similarity=0.171 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh-hCCCChHHHHHHHHHHHHHHHHHHHHHhhhc-----cCC-CCCHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSL-NRGMSHYVLVVYRHAFATAVIAPFAFFLERK-----AQP-KITFKVFMQIFVLA 86 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~-----~~~-~~~~~~~~~~~~~g 86 (409)
..|+.++....+.-+...+..|... +.+.+-+.++++..+...+.+....+..+.. ..+ ......+..+.+.+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 4588899999998889999999886 4568888999999999988887776554321 111 11234466677788
Q ss_pred HHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 87 LLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
+++ .+-+++.+++.+..++...++.....-..+.+-..++.+++.++. ..+|+.++++|.++-..
T Consensus 236 v~g-f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 236 VMG-FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHH-HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence 887 777788899999999998888886666667777777778888888 69999999999988763
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.91 E-value=0.049 Score=46.86 Aligned_cols=63 Identities=21% Similarity=0.230 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecc
Q 015299 273 ISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGK 335 (409)
Q Consensus 273 ~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 335 (409)
.+..+|..++++.+|+.++.+...+..+..+++++++|+++...+++..++.+.|++++.+..
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 457788999999999999999999999999999999999999999999999999999887654
No 104
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.38 E-value=0.77 Score=40.87 Aligned_cols=137 Identities=12% Similarity=0.088 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh-hCCCChHHHHHHHHHHHHHHHHHHHHHhhhccC-----CCCCHHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSL-NRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQ-----PKITFKVFMQIFVLAL 87 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~ 87 (409)
..|-++++++..+-|.....-...- +..-+...+.+.-.+-+.+.+..-+++.+. .| .......|+.+..+++
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE-lweF~yF~~RhP~~~~~l~l~ai 249 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE-LWEFFYFVQRHPYVFWDLTLLAI 249 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh-HHHHHHHHHhccHHHHHHHHHHH
Confidence 4577888888888777776643321 112233344444444444443332222110 00 0011245777888899
Q ss_pred HHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 88 LGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
++ ++++.+.|.-+.+-++-.-+++..+--+|+++.+.++++.+++.+ ||+|..+.+.|...=..
T Consensus 250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADVV 313 (337)
T ss_pred HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHhh
Confidence 88 999999999999988888899999999999999999999999999 89999999998877553
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.32 E-value=0.49 Score=41.77 Aligned_cols=136 Identities=13% Similarity=0.193 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-hCCCChHHHHHHHHHHHHHHHHHHHHHhhhccC----CCCCHHHHHHHHHHHHHHH
Q 015299 16 PYFAMISLQFGYAGMNIITKVSL-NRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQ----PKITFKVFMQIFVLALLGP 90 (409)
Q Consensus 16 g~l~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~ 90 (409)
|++.+....+.-+..-...|.-. -.....++.+++..+++..+++.+.+..+.... ..++.....+.++.|++.
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s- 234 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS- 234 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence 44555444444444444444432 145778889999999999998888766543221 123444556777888887
Q ss_pred HHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 91 VIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
++-.++.-|+++-++.+..+.+..+.-.-..+-+.++++|+.++. .+.++++++...++-..
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYav 296 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAV 296 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHH
Confidence 777778899999999999999999998889999999999999999 69999999877776654
No 106
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=92.43 E-value=0.55 Score=44.39 Aligned_cols=142 Identities=15% Similarity=0.137 Sum_probs=85.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHh-c-CCC-cccccccchhHHHHHHH
Q 015299 190 DWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVI-E-HKP-SVWQIGWDMNLLAAAYA 266 (409)
Q Consensus 190 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~-~~~~~~~~~~~~~l~~~ 266 (409)
+..+|+++-.+++++.+.+.+=.||. |+. +....=..+.+++-++ .|....+ . ++. ......+...+......
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~W--sWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGW--SWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCc--cHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 45799999999999999999998874 554 4444333344343333 3333222 1 111 11122222244455555
Q ss_pred HHHHhHHHHHHHHHHHhhcCceEe-eechhhHHHHHHHHHHHHhcc-------ccchhhhhhHHHHHhhhheeeeccc
Q 015299 267 GIVTSSISYFVQGLVIKKRGPVFA-TAFSPLMMIIVAIMGSFILAE-------NIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 267 g~~~~~~~~~l~~~al~~~~~~~~-s~~~~l~pv~a~l~~~~~~~e-------~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
|++ -.++-..|-.++|+++.+.. ++..-+..+++.++--++.|+ +-....++|.++.++|+.+..+.-.
T Consensus 80 G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 80 GVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred HHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence 664 45777888889999987543 444445555555555544332 2234679999999999988876533
No 107
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=92.16 E-value=0.26 Score=37.85 Aligned_cols=112 Identities=13% Similarity=0.217 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCh------HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHH
Q 015299 18 FAMISLQFGYAGMNIITKVSLNRGMSH------YVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPV 91 (409)
Q Consensus 18 l~~~~~~~~~~~~~~~~k~~~~~~~~~------~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (409)
.-++...++||..+.+.|.. +.+.+. ....+.|-..... +.|+++ ..-+++ -
T Consensus 6 ~~lvaVgllWG~Tnplirrg-s~g~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y~----iPFllN-q 63 (125)
T KOG4831|consen 6 DKLVAVGLLWGATNPLIRRG-SLGWDKVKSSSRKIMIALQEMKTLF----------------LNWEYL----IPFLLN-Q 63 (125)
T ss_pred HHHHHHHHHHccccHHHHHH-HhhHhhccCchHHHHHHHHHHHHHH----------------HhHHHH----HHHHHH-H
Confidence 45677889999999999998 443322 2222222211111 122222 222333 4
Q ss_pred HHHHHHHhhhcccCchhhhhhc-chhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHH
Q 015299 92 IDQNFYYAGLKFTSPTFSCAMS-NMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMT 157 (409)
Q Consensus 92 ~~~~~~~~al~~~~~~~~~ii~-~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~ 157 (409)
.+..+||+-++..+.+.+..+. +++-.|+.+.+.. ++|+...+. .++|+.+.++|+.+++
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~g~~-----a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQGGL-----ALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccccce-----eehhhhHHhhhhhhee
Confidence 4567889999999999998885 5677788888866 556555443 7889999999988764
No 108
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=91.64 E-value=4 Score=37.99 Aligned_cols=137 Identities=14% Similarity=0.135 Sum_probs=90.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhC----CCChHHHHHHHHHHHHHHHHHHHHHhhhccCC-------CCC----HH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLNR----GMSHYVLVVYRHAFATAVIAPFAFFLERKAQP-------KIT----FK 77 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~-------~~~----~~ 77 (409)
+..|.++...++.+-|+-+.++++.+.+ .-+|+...+.-.-...+.++|..+..++.... ..+ ++
T Consensus 162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~r 241 (349)
T KOG1443|consen 162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILR 241 (349)
T ss_pred eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHH
Confidence 5679999999999999999999998732 23577777666666666777766554432211 111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHH
Q 015299 78 VFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIM 156 (409)
Q Consensus 78 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li 156 (409)
....+.+.|... ++.-..-+.=+..++.-..++..-..=+.+.+++.++++++++.. -|.|..++..|+.+=
T Consensus 242 v~g~i~l~g~la-F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 242 VIGLISLGGLLA-FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHH-HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHHh
Confidence 222233333333 222222243445555555555555667789999999999999988 699999999999886
No 109
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.39 E-value=1.1 Score=40.94 Aligned_cols=138 Identities=11% Similarity=0.108 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh-hCCCChHHHHHHHHHHHHHHHHHHHHHhhhcc--C---CCCCHHHHHHHHHHHH
Q 015299 14 SKPYFAMISLQFGYAGMNIITKVSL-NRGMSHYVLVVYRHAFATAVIAPFAFFLERKA--Q---PKITFKVFMQIFVLAL 87 (409)
Q Consensus 14 ~~g~l~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~--~---~~~~~~~~~~~~~~g~ 87 (409)
..|+.++-.+.++-+.-.-+-...+ ...-+..+++++-+.++++++...+.....-. + .+-+++.+.+.++.+.
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 4566555555555555444433333 23456688999999999988888776543211 1 1235677777777777
Q ss_pred HHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 88 LGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
.+ .++..+...=++.-++..+..+...--..|.+++++++.+++|.+ -.-+..+.+.|+.+=..
T Consensus 269 ~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 269 AG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMY 332 (367)
T ss_pred Hh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcc
Confidence 77 555555544455556777777777777889999999999999998 36677778888888764
No 110
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=89.23 E-value=25 Score=35.00 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=34.1
Q ss_pred HHHHhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccccc
Q 015299 267 GIVTSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKHKE 338 (409)
Q Consensus 267 g~~~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 338 (409)
++++....|..| .|+...+...-+.. -.--+..-+...++|.++.++.+.....+...+
T Consensus 250 svv~~Y~~yL~~-SAlss~P~~~CNp~------------~~~~~~~~~~~~iig~i~~~~~v~yss~ra~~~ 308 (429)
T PF03348_consen 250 SVVSLYTTYLTW-SALSSEPDKECNPS------------GSRSGSWNTWQSIIGLIFTFVSVLYSSFRASSS 308 (429)
T ss_pred HHHHHHHHHHHH-HHHHcCCCcccCCc------------ccccCCcchHHHHHHHHHHHHHHHHhccccccc
Confidence 444434445554 56776664444444 001233456678999999999987776654433
No 111
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=88.73 E-value=1.3 Score=40.56 Aligned_cols=141 Identities=20% Similarity=0.144 Sum_probs=98.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhh-CCCChHHHHHHHHHHHHHHHHHHHHHhhh----ccCCCC-CHHHHHHHHHHH
Q 015299 13 TSKPYFAMISLQFGYAGMNIITKVSLN-RGMSHYVLVVYRHAFATAVIAPFAFFLER----KAQPKI-TFKVFMQIFVLA 86 (409)
Q Consensus 13 ~~~g~l~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~a~i~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g 86 (409)
...|.++.+.+++.-+...+.+|..+. .+=--+.++++..+.+.++++|.....+. ...+.. .++.|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 357999999999999999999998752 22335778888999999999998876433 122233 567777777788
Q ss_pred HHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhc
Q 015299 87 LLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYK 160 (409)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~ 160 (409)
++| +.-++.-.+=++.+++-...+-...-...=.+++..+++|..+.. .|-+.++.++|-..-...+
T Consensus 263 lfg-F~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 263 LFG-FAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred HHH-HHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHH
Confidence 877 333333344555565544443333444555788999999988887 5888888888888777543
No 112
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=88.11 E-value=7.5 Score=35.83 Aligned_cols=140 Identities=14% Similarity=0.191 Sum_probs=93.8
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhh-hCCCChHHHHHHHHHHHHHHHHHHHHH----hhh-c--cCCCCCHHHHHHH-
Q 015299 12 ETSKPYFAMISLQFGYAGMNIITKVSL-NRGMSHYVLVVYRHAFATAVIAPFAFF----LER-K--AQPKITFKVFMQI- 82 (409)
Q Consensus 12 ~~~~g~l~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~a~i~l~~~~~~----~~~-~--~~~~~~~~~~~~~- 82 (409)
+-..|-++.+++.++.+...++=...+ ..+++|.+.+.+..+.+..++..++.. .-. . .-++-.+.+|...
T Consensus 173 ~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~ 252 (372)
T KOG3912|consen 173 SIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAF 252 (372)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHH
Confidence 446799999999999999999965544 467999999999998886555443322 111 0 1112223444332
Q ss_pred --------HHHHHHHHHHHHHHHH----hhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHH
Q 015299 83 --------FVLALLGPVIDQNFYY----AGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTV 150 (409)
Q Consensus 83 --------~~~g~~~~~~~~~~~~----~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~ 150 (409)
+...+.+...+..+|+ +--++.++++=.++-.+-..++=+++.....|+++.. |+.|.++.+
T Consensus 253 ~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ll------qilGFliLi 326 (372)
T KOG3912|consen 253 AALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLL------QILGFLILI 326 (372)
T ss_pred HHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHH------HHHHHHHHH
Confidence 2333333333333332 2234556677777777777888888888999999999 799999999
Q ss_pred HHHHHHH
Q 015299 151 AGAMIMT 157 (409)
Q Consensus 151 ~Gv~li~ 157 (409)
.|..+--
T Consensus 327 ~Gi~lY~ 333 (372)
T KOG3912|consen 327 MGIILYN 333 (372)
T ss_pred HHHHHHH
Confidence 9988753
No 113
>PRK02237 hypothetical protein; Provisional
Probab=86.97 E-value=1.8 Score=33.55 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=39.9
Q ss_pred eeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeecc
Q 015299 290 ATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGK 335 (409)
Q Consensus 290 ~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 335 (409)
.+...-+-++.++++++.+-|.+|+.+.++|.++.++|+.++.+..
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3567777888999999999999999999999999999987776554
No 114
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=86.49 E-value=0.26 Score=45.54 Aligned_cols=130 Identities=16% Similarity=0.089 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHH-hcCC------Ccc----cccccchhHHHHHHHH
Q 015299 199 IIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFV-IEHK------PSV----WQIGWDMNLLAAAYAG 267 (409)
Q Consensus 199 l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~------~~~----~~~~~~~~~~~l~~~g 267 (409)
+++.+||+-.-..+|...|+.+.+ +.+.+=+.++.++...+..+ +... .+. ....+...+......|
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~--qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLP--QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCcc--ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 456778888888888776655212 12333333333333222221 1110 111 1111222333334444
Q ss_pred HHHhHHHHHHHHHHHhhcCceEeeechh-hHHHHHHHHHHHHhccccc--hhhhhhHHHHHhhhheee
Q 015299 268 IVTSSISYFVQGLVIKKRGPVFATAFSP-LMMIIVAIMGSFILAENIY--LGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 268 ~~~~~~~~~l~~~al~~~~~~~~s~~~~-l~pv~a~l~~~~~~~e~~~--~~~~iG~~li~~g~~l~~ 332 (409)
++ --++.++..+++...+.+..-++.. +..+.+.++.++ ++.+.+ ..-+.|.+++++++++-.
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 44 4588899999999888877665542 233344444443 344443 245668877777766543
No 115
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=84.07 E-value=0.32 Score=44.24 Aligned_cols=50 Identities=0% Similarity=0.012 Sum_probs=0.0
Q ss_pred hcccCchhhhhhcchhHHHHHHH--HHHHhhhhcccccccccchhhhHHHHHHHHHHH
Q 015299 101 LKFTSPTFSCAMSNMLPAMTFVM--AVICRMEKINMKKVRCQAKVVGTAVTVAGAMIM 156 (409)
Q Consensus 101 l~~~~~~~~~ii~~~~pi~~~ll--s~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li 156 (409)
++-.+-+-.+++++.+.+.++|+ -.+|.|+-+-+. ..+++++.++-..+.
T Consensus 44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPL------GlLCiilimi~lLv~ 95 (381)
T PF05297_consen 44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPL------GLLCIILIMIVLLVS 95 (381)
T ss_dssp ----------------------------------------------------------
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcc------hHHHHHHHHHHHHHH
Confidence 33344455566665554444333 333344444445 466655554444433
No 116
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=83.54 E-value=57 Score=33.50 Aligned_cols=29 Identities=7% Similarity=-0.043 Sum_probs=13.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 015299 190 DWFLGSIFLIIATLAWASLFVLQTKALETY 219 (409)
Q Consensus 190 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~ 219 (409)
...+|.+.+..+.-.-....+ ..++.++.
T Consensus 253 a~~yGll~a~~gvGai~Gal~-~~~l~~~~ 281 (524)
T PF05977_consen 253 ASGYGLLLAAFGVGAILGALL-LPRLRRRL 281 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhhccc
Confidence 345676665544433333333 33344444
No 117
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=83.31 E-value=1.7 Score=33.64 Aligned_cols=46 Identities=15% Similarity=0.275 Sum_probs=39.5
Q ss_pred eechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccc
Q 015299 291 TAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 291 s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
+...-+-++.++++++.+-+++|+.+.++|.++.++|+.++.+..+
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 4556667788999999999999999999999999999888776543
No 118
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=82.93 E-value=29 Score=30.70 Aligned_cols=86 Identities=7% Similarity=0.063 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015299 21 ISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAG 100 (409)
Q Consensus 21 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 100 (409)
.+-+++.|.+..+.+.. .... .......-.+++.+++..+..+..+.. .+-.++.++..++.++.. .+.+...+..
T Consensus 91 ~if~~~~gi~~~f~~~~-~~~~-gi~tli~~~i~~G~~~~~~~~~i~~~~-~~~~r~~~~k~~~~~~~~-~~~w~~~~~~ 166 (206)
T PF06570_consen 91 GIFSLLFGIMGFFSPKN-SNQY-GIITLILVSIVGGLVFYFIFKYIYPYK-KKKKRPSWWKYILISVLA-MVLWIVIFVL 166 (206)
T ss_pred HHHHHHHHHHHHHhhcc-cccc-cHHHHHHHHHHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHHHH-HHHHHHHHHH
Confidence 33444555555555533 1222 223333333344444433332322211 111223344444444444 3444444545
Q ss_pred hcccCchhhh
Q 015299 101 LKFTSPTFSC 110 (409)
Q Consensus 101 l~~~~~~~~~ 110 (409)
...+|....-
T Consensus 167 ~~~lp~~inp 176 (206)
T PF06570_consen 167 TSFLPPVINP 176 (206)
T ss_pred HHHccccCCc
Confidence 5556655443
No 119
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=80.93 E-value=6 Score=30.56 Aligned_cols=60 Identities=22% Similarity=0.235 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhhcCceEeeech-hhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheee
Q 015299 273 ISYFVQGLVIKKRGPVFATAFS-PLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 273 ~~~~l~~~al~~~~~~~~s~~~-~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
.+..+|+..+++.+-+.+..+. .+...++.+.|..+-.|.+.-..++|..++++|+.+..
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 3445666778888887776654 56888999999977777778889999999999987753
No 120
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=78.95 E-value=0.58 Score=42.21 Aligned_cols=141 Identities=13% Similarity=0.056 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHH
Q 015299 190 DWFLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIV 269 (409)
Q Consensus 190 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 269 (409)
..++|..++=.-+++..........+.++.-..|...++.....-+++-.+...+. . +... .-|.-.+.++++
T Consensus 15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR-~--~~~~----~~~~hYilla~~ 87 (336)
T KOG2766|consen 15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFR-R--KYIK----AKWRHYILLAFV 87 (336)
T ss_pred hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhh-h--HHHH----HHHHHhhheeEE
Confidence 34555555544444444444445555555323555555555555455555555522 2 1111 123334444543
Q ss_pred HhHHHHHHHHHHHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccccc
Q 015299 270 TSSISYFVQGLVIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKHKE 338 (409)
Q Consensus 270 ~~~~~~~l~~~al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 338 (409)
-+=++++...|.++++-+.+..+..-..+...+++|++++.+-.+.++.|.++-++|+.++....-..
T Consensus 88 -DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a 155 (336)
T KOG2766|consen 88 -DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA 155 (336)
T ss_pred -eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc
Confidence 45566677788999999999999888999999999999999999999999999999999888765544
No 121
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=70.97 E-value=5.6 Score=30.77 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=26.7
Q ss_pred HHHHHHHhccccchhhhhhHHHHHhhhheee
Q 015299 302 AIMGSFILAENIYLGSVLGAILIVVGLYSVL 332 (409)
Q Consensus 302 ~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 332 (409)
..+++++++|++++..+.|.++++.+++.+.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 4567889999999999999999999877653
No 122
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=70.88 E-value=15 Score=28.37 Aligned_cols=47 Identities=13% Similarity=0.123 Sum_probs=39.5
Q ss_pred eeechhhHHHHHHHHHHHHhccccchhhhhhHHHHHhhhheeeeccc
Q 015299 290 ATAFSPLMMIIVAIMGSFILAENIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 290 ~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
.+...-+-++.++++.+++=+..|+.+.++|.++-++|+.++....+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 34566677888999999999999999999999999999887776643
No 123
>PRK02237 hypothetical protein; Provisional
Probab=66.53 E-value=35 Score=26.65 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=35.1
Q ss_pred chhhhhhc-chhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 106 PTFSCAMS-NMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 106 ~~~~~ii~-~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
.+.+...+ ....+...+..+.+-++|+++. +++|..++++|+.++.+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence 34443333 3455556678888889988888 89999999999998863
No 124
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=66.51 E-value=80 Score=29.32 Aligned_cols=139 Identities=12% Similarity=0.140 Sum_probs=90.4
Q ss_pred cchhchHHHHHHHHHHHHHHHHHHHHHHhh-hCCCChHHHHHHHHHHHHHHHHHHHH--H-----hhhcc---CCCC---
Q 015299 9 NFLETSKPYFAMISLQFGYAGMNIITKVSL-NRGMSHYVLVVYRHAFATAVIAPFAF--F-----LERKA---QPKI--- 74 (409)
Q Consensus 9 ~~~~~~~g~l~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~a~i~l~~~~~--~-----~~~~~---~~~~--- 74 (409)
.+.....|+.++.++.+.-+.+.+.-...+ .-|=++-+..|+-.......++...- + ..... -|..
T Consensus 158 ~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~ 237 (330)
T KOG1583|consen 158 DFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFK 237 (330)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCcc
Confidence 344556888889999999999988877766 34678899999999988877664321 0 00000 0111
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhhccc----CchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHH
Q 015299 75 TFKVFMQIFVLALLGPVIDQNFYYAGLKFT----SPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTV 150 (409)
Q Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~----~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~ 150 (409)
-...|.+++. .++.+.+-..+.-.+ +.-++++...+=-.+..++|.+.++.++++. .|+|.++.+
T Consensus 238 vP~~~~yLl~-----n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF 306 (330)
T KOG1583|consen 238 VPSMWVYLLF-----NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVF 306 (330)
T ss_pred ccHHHHHHHH-----HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHH
Confidence 1122333222 233343333333222 2234455566677888999999999999999 599999999
Q ss_pred HHHHHHHH
Q 015299 151 AGAMIMTL 158 (409)
Q Consensus 151 ~Gv~li~~ 158 (409)
+|..+...
T Consensus 307 ~Gt~~fa~ 314 (330)
T KOG1583|consen 307 FGTLLFAN 314 (330)
T ss_pred HHHHHHHH
Confidence 99998874
No 125
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=63.79 E-value=2.2e+02 Score=30.84 Aligned_cols=44 Identities=18% Similarity=0.113 Sum_probs=29.3
Q ss_pred hhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHH
Q 015299 107 TFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIM 156 (409)
Q Consensus 107 ~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li 156 (409)
+.+.++..+.|+-.+.++.+.+.+|.+.. .+.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~------~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDK------AFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccch------HHHHHHHHHHHHHHh
Confidence 66778889999999999998876654322 244444445555544
No 126
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=63.50 E-value=77 Score=29.02 Aligned_cols=42 Identities=14% Similarity=-0.030 Sum_probs=25.9
Q ss_pred HHhhcCceEeeechhhHHHHHHHHHHHHhccccchhhhhhHH
Q 015299 281 VIKKRGPVFATAFSPLMMIIVAIMGSFILAENIYLGSVLGAI 322 (409)
Q Consensus 281 al~~~~~~~~s~~~~l~pv~a~l~~~~~~~e~~~~~~~iG~~ 322 (409)
..++.++........++=.+-++-..+++.-.-....-.+++
T Consensus 115 cy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~~a~~~i 156 (249)
T PF10225_consen 115 CYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPEFAFAAI 156 (249)
T ss_pred hcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 345777777777777777777766666665554444333333
No 127
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.55 E-value=13 Score=28.27 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=27.6
Q ss_pred HHHHHHHhccccchhhhhhHHHHHhhhheeee
Q 015299 302 AIMGSFILAENIYLGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 302 ~l~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 333 (409)
..+++++++|++.+..+.|.++++.|++.+.+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 45688899999999999999999999887653
No 128
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=59.32 E-value=1.2e+02 Score=26.54 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=22.1
Q ss_pred HHHHHHHhccccchhhhhhHHHHH--hhhheeee
Q 015299 302 AIMGSFILAENIYLGSVLGAILIV--VGLYSVLW 333 (409)
Q Consensus 302 ~l~~~~~~~e~~~~~~~iG~~li~--~g~~l~~~ 333 (409)
-.+|..++.+-.=+.+.+|.+|.+ +|.+...+
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~ 166 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLAR 166 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 445777888877788888888775 45555543
No 129
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=56.69 E-value=4.9 Score=37.43 Aligned_cols=130 Identities=10% Similarity=0.093 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc------cCC-------CCCHHHHHHHHHHH
Q 015299 20 MISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFFLERK------AQP-------KITFKVFMQIFVLA 86 (409)
Q Consensus 20 ~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~~~~~------~~~-------~~~~~~~~~~~~~g 86 (409)
|+++.+|||......|++ ++.....+...+-+.++.++...+..+.-.. ..| .-+|......++-|
T Consensus 1 M~itmlcwGSW~nt~kL~-~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLA-ERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHH-HhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 456789999999999999 4544444556777777766655555432211 111 23556666666777
Q ss_pred HHHHHHHHHHHHhhhcccCchhhhhhcc-hhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHH
Q 015299 87 LLGPVIDQNFYYAGLKFTSPTFSCAMSN-MLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIM 156 (409)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~ii~~-~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li 156 (409)
++. .+++.+..+|+.+...+.+-++.. +.-+.-.++.++ +..|.+.-+ .-..|+.+.++.+++-
T Consensus 80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~----iLF~GV~cf~iAI~lg 144 (336)
T PF07168_consen 80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAE----ILFPGVACFLIAIILG 144 (336)
T ss_pred Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCce----EEEccHHHHHHHHHHH
Confidence 776 888999999999999888887764 333333444444 344444221 0144555555555443
No 130
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=53.30 E-value=14 Score=28.69 Aligned_cols=52 Identities=12% Similarity=0.139 Sum_probs=38.0
Q ss_pred hcccCchhhhhh-cchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 101 LKFTSPTFSCAM-SNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 101 l~~~~~~~~~ii-~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
++-...+.+... -....+...+..+.+-++++++. +++|..++++|+.++.+
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF 103 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence 444334443333 34555667788888889988888 89999999999999874
No 131
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=46.08 E-value=24 Score=28.90 Aligned_cols=17 Identities=24% Similarity=0.679 Sum_probs=9.8
Q ss_pred hhhhhHHHHHhhhheee
Q 015299 316 GSVLGAILIVVGLYSVL 332 (409)
Q Consensus 316 ~~~iG~~li~~g~~l~~ 332 (409)
..++|..+++.|++.+.
T Consensus 88 ~~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 88 SIIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34566666666655443
No 132
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=46.03 E-value=1.4e+02 Score=23.30 Aligned_cols=31 Identities=6% Similarity=-0.008 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHH
Q 015299 118 AMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAM 154 (409)
Q Consensus 118 i~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~ 154 (409)
..-+.++.+++||++++. ...|.++.+.++.
T Consensus 74 ~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~ 104 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWN------YLWAFLCILGAVY 104 (108)
T ss_pred heeHHHHHHHhCCCccHH------HHHHHHHHHHhhh
Confidence 344677889999999999 4666555544443
No 133
>PRK12650 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=45.16 E-value=4.8e+02 Score=29.14 Aligned_cols=50 Identities=6% Similarity=0.164 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHHHh
Q 015299 77 KVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICR 128 (409)
Q Consensus 77 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l 128 (409)
+...-.+..|+.|. ...+.|.-+.--+++.++...-+......++....+
T Consensus 620 ~rl~av~~~g~~G~--~~al~f~~~~APDvAlTq~~Vetlt~vl~~l~l~~l 669 (962)
T PRK12650 620 TRLAAVVLVGVVGV--GVTLQMLTLGAPDVALTQLLVEALTVVVMMLVLRRQ 669 (962)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33455666676663 233344445555667777665553333334333333
No 134
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=43.77 E-value=2.3e+02 Score=28.00 Aligned_cols=71 Identities=13% Similarity=0.271 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccC------------------------------chhhhhh-cchhHHHHH-HHHHHHh-
Q 015299 82 IFVLALLGPVIDQNFYYAGLKFTS------------------------------PTFSCAM-SNMLPAMTF-VMAVICR- 128 (409)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~al~~~~------------------------------~~~~~ii-~~~~pi~~~-lls~l~l- 128 (409)
.+++|+++...+....-.|.+..+ .+.+.++ ....|-+.. +++.++.
T Consensus 5 fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi~ 84 (402)
T PF02487_consen 5 FWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFIH 84 (402)
T ss_pred HHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhhh
Confidence 456677776666666655555544 2222233 334454443 4454444
Q ss_pred hhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 129 MEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 129 ~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
+-++..| -+..++++.+|.+++..
T Consensus 85 ~v~y~~R------i~~~~~l~~~g~l~va~ 108 (402)
T PF02487_consen 85 RVPYWIR------ILICVALSAAGMLLVAF 108 (402)
T ss_pred hccchHH------HHHHHHHHHHHHhheee
Confidence 3444555 57777888888888763
No 135
>PF15102 TMEM154: TMEM154 protein family
Probab=42.13 E-value=28 Score=28.83 Aligned_cols=24 Identities=25% Similarity=0.328 Sum_probs=13.6
Q ss_pred hhhHHHHHhhhheeeecccccccc
Q 015299 318 VLGAILIVVGLYSVLWGKHKEKME 341 (409)
Q Consensus 318 ~iG~~li~~g~~l~~~~~~~~~~~ 341 (409)
+++++|++..++++.+.|+|+.|.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 445555666666666665555443
No 136
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=40.46 E-value=3.9e+02 Score=26.74 Aligned_cols=39 Identities=21% Similarity=0.338 Sum_probs=22.7
Q ss_pred HHHHHHHHHHH-HhccccchhhhhhHHHHHhhhheeeeccc
Q 015299 297 MMIIVAIMGSF-ILAENIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 297 ~pv~a~l~~~~-~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
-++.+.++..+ ++...+ ...++|.++++.|+.+|.+.++
T Consensus 393 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~~~~~ 432 (468)
T TIGR03810 393 IGLVALLYAVWLIYAAGL-KYLLLSAILYAPGIYFYARARK 432 (468)
T ss_pred HHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 33444443333 333333 3578888889999888865433
No 137
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=39.47 E-value=2.6e+02 Score=24.33 Aligned_cols=112 Identities=9% Similarity=0.053 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHH-hhhccCCCCCHHHHHHHHHHHHHHHHHHH
Q 015299 16 PYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFF-LERKAQPKITFKVFMQIFVLALLGPVIDQ 94 (409)
Q Consensus 16 g~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (409)
++++.-+-+++-|.+..+.+-+ ...+-..++..-.+.++...+.+-+. +.+....+ +.. ++..++..... .+-+
T Consensus 101 sLl~lg~~aLlsgitaff~~nA--~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sq-r~~-~~K~~lv~~~s-m~lW 175 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNA--QVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQ-RPG-TWKYLLVAVLS-MLLW 175 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCC--cchhHHHHHHHHHhhhHHHHHHHHHHHHhhccccc-CCc-hHHHHHHHHHH-HHHH
Confidence 5555556667778888887776 34444554444444444433333222 22221111 111 22233333333 3344
Q ss_pred HHHHhhhcccCchhhhhhcchhHHHHHHHHHHH------hhhhcccc
Q 015299 95 NFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVIC------RMEKINMK 135 (409)
Q Consensus 95 ~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~------l~e~~~~~ 135 (409)
.+.+.+-.++|.+..-.+ .|+...+.+.+. +++|.+.+
T Consensus 176 i~v~i~t~~lPtslN~~L---~pi~l~IiGav~lalRfylkkk~NIq 219 (226)
T COG4858 176 IAVMIATVFLPTSLNPQL---PPIALTIIGAVILALRFYLKKKKNIQ 219 (226)
T ss_pred HHHHHHHhhCCCcCCcCC---chHHHHHHHHHHHHHHHHHHHhhccc
Confidence 555566677776655443 444444444333 35555544
No 138
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=38.95 E-value=1.7e+02 Score=26.59 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=24.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 015299 189 KDWFLGSIFLIIATLAWASLFVLQTKALETY 219 (409)
Q Consensus 189 ~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~ 219 (409)
....+|.+++.+..+.+|.=....|+..|..
T Consensus 124 ~~~~lG~vc~~~nI~~~~sPL~~m~~VIktk 154 (243)
T KOG1623|consen 124 RVSVLGIVCAVFNISMFAAPLSVIRKVIKTK 154 (243)
T ss_pred eeeeeehhhhhhhHHhhhccHHhhhhheecC
Confidence 3557899999999999988777777776664
No 139
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=37.90 E-value=78 Score=24.54 Aligned_cols=39 Identities=13% Similarity=0.220 Sum_probs=31.0
Q ss_pred chhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHH
Q 015299 114 NMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTL 158 (409)
Q Consensus 114 ~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~ 158 (409)
....+...+..+++-+.++++. +++|.+++++|+.++.+
T Consensus 66 GvyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 66 GVYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILF 104 (109)
T ss_pred chHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEe
Confidence 3455556677777788888888 89999999999888874
No 140
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=35.65 E-value=2.5e+02 Score=28.04 Aligned_cols=15 Identities=0% Similarity=-0.040 Sum_probs=7.4
Q ss_pred hhhhHHHHHhhhhee
Q 015299 317 SVLGAILIVVGLYSV 331 (409)
Q Consensus 317 ~~iG~~li~~g~~l~ 331 (409)
..++++++++.++++
T Consensus 178 F~~a~~v~l~~i~~~ 192 (437)
T TIGR00939 178 FGTPCVVQLICIVCY 192 (437)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344555555555444
No 141
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=33.40 E-value=5.4e+02 Score=26.29 Aligned_cols=23 Identities=9% Similarity=0.197 Sum_probs=13.0
Q ss_pred hhhhHHHHHhhhheeeecccccc
Q 015299 317 SVLGAILIVVGLYSVLWGKHKEK 339 (409)
Q Consensus 317 ~~iG~~li~~g~~l~~~~~~~~~ 339 (409)
.|-....++.-++++.|+...+.
T Consensus 424 ~W~~l~~~iLvvI~~LWrPS~nn 446 (518)
T KOG2568|consen 424 FWPLLFFLILVVIMFLWRPSQNN 446 (518)
T ss_pred cHHHHHHHHHHHHHHhcCCCCCC
Confidence 34455555555666677665443
No 142
>COG2245 Predicted membrane protein [Function unknown]
Probab=32.33 E-value=2.7e+02 Score=23.76 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 015299 199 IIATLAWASLFVLQTKALETY 219 (409)
Q Consensus 199 l~aa~~~a~~~v~~~~~~~~~ 219 (409)
+++-+++-+..+..+.+.+..
T Consensus 29 ilSlVG~VLvlval~~iS~~~ 49 (182)
T COG2245 29 ILSLVGLVLVLVALYMISKQV 49 (182)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 677777777777777777776
No 143
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=31.76 E-value=6.9e+02 Score=27.01 Aligned_cols=20 Identities=15% Similarity=0.075 Sum_probs=9.7
Q ss_pred chhHHHHHHHHHHHhhhhcc
Q 015299 114 NMLPAMTFVMAVICRMEKIN 133 (409)
Q Consensus 114 ~~~pi~~~lls~l~l~e~~~ 133 (409)
...|.+..++..+++.|.++
T Consensus 340 ~~lp~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 340 CAFPCVFAIGALTFMPESPR 359 (742)
T ss_pred HHHHHHHHHHHHHHcCCCHH
Confidence 33455555555555544433
No 144
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=31.54 E-value=13 Score=30.55 Aligned_cols=27 Identities=4% Similarity=0.219 Sum_probs=18.1
Q ss_pred hhcCceEeeechhhHHHHHHHHHHHHh
Q 015299 283 KKRGPVFATAFSPLMMIIVAIMGSFIL 309 (409)
Q Consensus 283 ~~~~~~~~s~~~~l~pv~a~l~~~~~~ 309 (409)
..-+....+.+.|+.|.++++++.+++
T Consensus 70 ~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 70 EEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445566677888888887777664
No 145
>PF15345 TMEM51: Transmembrane protein 51
Probab=31.47 E-value=22 Score=31.70 Aligned_cols=25 Identities=16% Similarity=0.303 Sum_probs=15.9
Q ss_pred hhHHHHHhhhheeeecccccccccc
Q 015299 319 LGAILIVVGLYSVLWGKHKEKMEEF 343 (409)
Q Consensus 319 iG~~li~~g~~l~~~~~~~~~~~~~ 343 (409)
.|++|.+.++++-.+.|+|+++..+
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq~~e 91 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQGEE 91 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4666677777777766666554433
No 146
>PF15471 TMEM171: Transmembrane protein family 171
Probab=31.14 E-value=47 Score=30.34 Aligned_cols=19 Identities=21% Similarity=0.475 Sum_probs=14.5
Q ss_pred hhhhhhHHHHHhhhheeee
Q 015299 315 LGSVLGAILIVVGLYSVLW 333 (409)
Q Consensus 315 ~~~~iG~~li~~g~~l~~~ 333 (409)
..|++|-+++++|......
T Consensus 161 slQImGPlIVl~GLCFFVV 179 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVV 179 (319)
T ss_pred ehhhhhhHHHHHhhhhhhe
Confidence 3689999999999655443
No 147
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=31.11 E-value=3.2e+02 Score=27.39 Aligned_cols=14 Identities=29% Similarity=0.517 Sum_probs=6.9
Q ss_pred hhhhHHHHHhhhhe
Q 015299 317 SVLGAILIVVGLYS 330 (409)
Q Consensus 317 ~~iG~~li~~g~~l 330 (409)
.+.|+++++.++..
T Consensus 416 ~~~~~~~~i~~~~~ 429 (476)
T PLN00028 416 SLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555554443
No 148
>PF14851 FAM176: FAM176 family
Probab=29.60 E-value=71 Score=26.80 Aligned_cols=28 Identities=4% Similarity=-0.161 Sum_probs=12.0
Q ss_pred HHHHHHHHhhcCceEeeechhhHHHHHH
Q 015299 275 YFVQGLVIKKRGPVFATAFSPLMMIIVA 302 (409)
Q Consensus 275 ~~l~~~al~~~~~~~~s~~~~l~pv~a~ 302 (409)
..+-.|+.-+-.|-.++++..+...+++
T Consensus 7 nsLaaya~I~~~PE~~aLYFv~gVC~GL 34 (153)
T PF14851_consen 7 NSLAAYAHIRDNPERFALYFVSGVCAGL 34 (153)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 3344444444444444444444443333
No 149
>PTZ00359 hypothetical protein; Provisional
Probab=28.93 E-value=3.7e+02 Score=26.47 Aligned_cols=20 Identities=10% Similarity=0.149 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 015299 192 FLGSIFLIIATLAWASLFVL 211 (409)
Q Consensus 192 ~~G~~~~l~aa~~~a~~~v~ 211 (409)
..-.-..+.-+++.+.|.+-
T Consensus 226 ~a~lNYvllIaL~iSAYQVN 245 (443)
T PTZ00359 226 MAALNYIFVIGLCISAYQVN 245 (443)
T ss_pred cchHHHHHHHHHHHhhheee
Confidence 34455566666777777654
No 150
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=28.63 E-value=7.5e+02 Score=26.45 Aligned_cols=92 Identities=18% Similarity=0.258 Sum_probs=46.1
Q ss_pred HHHHHhhhC-CCChHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHH--HhhhcccCchh
Q 015299 32 IITKVSLNR-GMSHYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFY--YAGLKFTSPTF 108 (409)
Q Consensus 32 ~~~k~~~~~-~~~~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~al~~~~~~~ 108 (409)
.+.|+..++ -++|..=+..-..++..+... ..+.+|| +.+.....+..|.++ .++...+ +.-++..|++.
T Consensus 20 fl~kya~~~g~l~p~~Rv~~g~~~g~~l~~~-g~~l~~k-----~~~~~~~~L~g~G~a-~ly~t~~aa~~~y~l~~~~~ 92 (745)
T PF10101_consen 20 FLLKYAIDAGWLGPAVRVALGAALGLALLAA-GERLRRK-----GYRAFAQALAGGGIA-VLYLTVFAAYHLYGLIPPPV 92 (745)
T ss_pred HHHHHHHHcCcCCHHHHHHHHHHHHHHHHHH-HHHHHHc-----ccchHHHHHHHHHHH-HHHHHHHHHHHHHHhcCHHH
Confidence 456777543 366665444444444333332 2222332 113344444444443 3333222 33455677777
Q ss_pred hhhhcchhHHHHHHHHHHHhhh
Q 015299 109 SCAMSNMLPAMTFVMAVICRME 130 (409)
Q Consensus 109 ~~ii~~~~pi~~~lls~l~l~e 130 (409)
+-++.......++.++....+|
T Consensus 93 af~~~~~v~~~~~~la~r~~~~ 114 (745)
T PF10101_consen 93 AFALLALVTAAAVALALRYDSP 114 (745)
T ss_pred HHHHHHHHHHHHHHHHHHcCCH
Confidence 7777777667777777665555
No 151
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=28.53 E-value=3.7e+02 Score=26.86 Aligned_cols=134 Identities=11% Similarity=0.103 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHh-
Q 015299 193 LGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTFVIEHKPSVWQIGWDMNLLAAAYAGIVTS- 271 (409)
Q Consensus 193 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~- 271 (409)
+|++.. +-.++|++.-.+...+..+. +|-..+....+.++++.+.+... .+.+ ........-|.+-+
T Consensus 66 lG~i~s-~f~i~YG~sKf~~G~~sDr~--npr~fm~~gLilsai~nil~Gfs----~s~~-----~~~~l~~lng~fQg~ 133 (448)
T COG2271 66 LGILGS-AFSITYGVSKFVMGVLSDRS--NPRYFMAFGLILSAIVNILFGFS----PSLF-----LFAVLWVLNGWFQGM 133 (448)
T ss_pred HHHHHH-HHHHHHHHHHHHhhhhcccC--CCceeehHHHHHHHHHHHHHhhh----hHHH-----HHHHHHHHHHHHhcC
Confidence 444333 33467777777777766676 77666666666666655555441 0000 00111111121111
Q ss_pred ---HHHHHHHHHHHhhcCceEee-------echhhHHHHHHHHHHHHhc-cccchhhhhhHHHHHhhhheeeecccccc
Q 015299 272 ---SISYFVQGLVIKKRGPVFAT-------AFSPLMMIIVAIMGSFILA-ENIYLGSVLGAILIVVGLYSVLWGKHKEK 339 (409)
Q Consensus 272 ---~~~~~l~~~al~~~~~~~~s-------~~~~l~pv~a~l~~~~~~~-e~~~~~~~iG~~li~~g~~l~~~~~~~~~ 339 (409)
..+-.+..+--++..-+..+ +-..+-|+++.+ +++.++ ..-...-.-|++.+++|++++.+.|.+++
T Consensus 134 Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 134 GWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred CCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 01111111222333333333 334455555544 555544 33334456788888888888776655443
No 152
>PRK10489 enterobactin exporter EntS; Provisional
Probab=28.15 E-value=5.6e+02 Score=24.79 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=8.6
Q ss_pred hhhhHHHHHhhhheeee
Q 015299 317 SVLGAILIVVGLYSVLW 333 (409)
Q Consensus 317 ~~iG~~li~~g~~l~~~ 333 (409)
-+.|++..+++++....
T Consensus 382 ~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 382 SASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 44555555555555443
No 153
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=28.10 E-value=15 Score=23.37 Aligned_cols=18 Identities=11% Similarity=0.372 Sum_probs=10.9
Q ss_pred cchhhhhhHHHHHhhhhe
Q 015299 313 IYLGSVLGAILIVVGLYS 330 (409)
Q Consensus 313 ~~~~~~iG~~li~~g~~l 330 (409)
|+|..++=.++|+.|++.
T Consensus 2 p~wlt~iFsvvIil~If~ 19 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIFA 19 (49)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 566666666666666543
No 154
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=27.95 E-value=7.3e+02 Score=26.06 Aligned_cols=15 Identities=20% Similarity=0.244 Sum_probs=8.0
Q ss_pred hhhHHHHHHHHHHHH
Q 015299 143 VVGTAVTVAGAMIMT 157 (409)
Q Consensus 143 ~~~~~i~~~Gv~li~ 157 (409)
+++.++..++...+.
T Consensus 384 i~~~~~~ta~~Gama 398 (599)
T PF06609_consen 384 IFGSVLMTAFCGAMA 398 (599)
T ss_pred HHHHHHHHHHHHHHH
Confidence 456555555544444
No 155
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=27.53 E-value=3e+02 Score=23.99 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=38.5
Q ss_pred hhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCc
Q 015299 109 SCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSE 188 (409)
Q Consensus 109 ~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
.+++.+..-....+.-.+..||+++.- +.|.+...++..+... .|+ .+
T Consensus 29 ~aliaA~~~a~~~~v~RL~r~~~~~~a-------~~gl~gV~i~a~~A~~-tG~------------------------A~ 76 (187)
T PF11361_consen 29 PALIAALAVAVVIVVWRLVRRESVQPA-------LSGLFGVAISAAIAWR-TGS------------------------AK 76 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccHHH-------HHHHHHHHHHHHHHHH-HCC------------------------hh
Confidence 344444444445555666667766643 4454444444444332 221 23
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 015299 189 KDWFLGSIFLIIATLAWASLFVL 211 (409)
Q Consensus 189 ~~~~~G~~~~l~aa~~~a~~~v~ 211 (409)
+.+..|++.....+..+.+..+.
T Consensus 77 ~~Fl~gi~~n~~~~~~~l~S~lv 99 (187)
T PF11361_consen 77 DFFLPGIWTNAVYAVVFLVSVLV 99 (187)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Confidence 45567777777777666666555
No 156
>COG2323 Predicted membrane protein [Function unknown]
Probab=26.80 E-value=4.7e+02 Score=23.51 Aligned_cols=81 Identities=9% Similarity=0.123 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHH
Q 015299 44 HYVLVVYRHAFATAVIAPFAFFLERKAQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVM 123 (409)
Q Consensus 44 ~~~~~~~r~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~ll 123 (409)
...-.++|.++..++++.+....+|+.....+.-+....+.+|-+. +...+. ..++...+.+...+..++..++
T Consensus 3 ~~~~~~ir~vi~~~~l~l~~ri~Gkr~isqmt~fd~vv~i~iG~i~---~~~i~~---~~i~~~~~~~~~~~~~~l~~~l 76 (224)
T COG2323 3 FLLEVAIRSVIGYLILLLLLRIMGKRSISQMTIFDFVVMITLGSIA---GDAIFD---DDVSILPTIIAILTLALLQILL 76 (224)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCcCccccCCHHHHHHHHHHHHHH---HHHhhC---CCCchHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999988888776777766666555555443 232222 2234444444455556666777
Q ss_pred HHHHhhh
Q 015299 124 AVICRME 130 (409)
Q Consensus 124 s~l~l~e 130 (409)
+++-++-
T Consensus 77 ~~l~~ks 83 (224)
T COG2323 77 SYLSLKS 83 (224)
T ss_pred HHHHhcc
Confidence 7776654
No 157
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=26.68 E-value=5.8e+02 Score=24.54 Aligned_cols=17 Identities=12% Similarity=0.106 Sum_probs=10.0
Q ss_pred hhhhhhHHHHHhhhhee
Q 015299 315 LGSVLGAILIVVGLYSV 331 (409)
Q Consensus 315 ~~~~iG~~li~~g~~l~ 331 (409)
....+++++.+.++++.
T Consensus 370 ~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 370 GFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33566666666665554
No 158
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=26.65 E-value=4e+02 Score=22.62 Aligned_cols=53 Identities=13% Similarity=0.207 Sum_probs=33.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhC----CCchhHHHHHHHHHHHHHHHH
Q 015299 189 KDWFLGSIFLIIATLAWASLFVLQTKALETYK----NHQLSLTSLMCFVGTLQAIAV 241 (409)
Q Consensus 189 ~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~ 241 (409)
.+.......++.++++|++..++.....++.. |.|+.-..+..+.+.+.++.+
T Consensus 128 ~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaF 184 (193)
T COG4657 128 HNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAF 184 (193)
T ss_pred hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHH
Confidence 34566788888999999998888766554431 344444445555555544443
No 159
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=26.51 E-value=6.6e+02 Score=25.10 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 015299 191 WFLGSIFLIIATLAWASLFVLQTKALETY 219 (409)
Q Consensus 191 ~~~G~~~~l~aa~~~a~~~v~~~~~~~~~ 219 (409)
...+..+.+.|+.+-++-..+.+...|+.
T Consensus 349 i~F~~AYliAa~a~i~Li~~Y~~~vl~~~ 377 (430)
T PF06123_consen 349 IGFNLAYLIAALACIGLISLYLSSVLKSW 377 (430)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34667778888888888888888777765
No 160
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=26.47 E-value=7.9e+02 Score=27.33 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=45.7
Q ss_pred chhchHHHHHHHHHHHHHHHHHHHHHHhhhCC---CChHHHHHHHHHHHHHHHHHHHHHh------hhc-cCC-C--CCH
Q 015299 10 FLETSKPYFAMISLQFGYAGMNIITKVSLNRG---MSHYVLVVYRHAFATAVIAPFAFFL------ERK-AQP-K--ITF 76 (409)
Q Consensus 10 ~~~~~~g~l~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~a~i~l~~~~~~~------~~~-~~~-~--~~~ 76 (409)
+.|-.+-+.+.+...+.+.+..++.-.. ... +.+.+++++-.+...+..+.+.... .++ +.| . +++
T Consensus 698 ~~ni~k~i~~~l~~n~~~~~~~~~~~~~-~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~ 776 (917)
T COG0474 698 YVNIKKFILYLLSKNVGEVLTLLIYSLF-NLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNR 776 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccch
Confidence 3444455555665555544444444444 233 7788888888887776444443221 111 111 1 455
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHh
Q 015299 77 KVFMQ-IFVLALLGPVIDQNFYYA 99 (409)
Q Consensus 77 ~~~~~-~~~~g~~~~~~~~~~~~~ 99 (409)
+.++. .+..|.....+....|.+
T Consensus 777 ~~~~~~i~~~~~~~~i~~~~~~~~ 800 (917)
T COG0474 777 KIFWRFILIIGLLSAILFILTFLL 800 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666 555566653444343433
No 161
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=25.90 E-value=2.1e+02 Score=19.24 Aligned_cols=45 Identities=24% Similarity=0.429 Sum_probs=31.5
Q ss_pred hhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015299 142 KVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALET 218 (409)
Q Consensus 142 ~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~ 218 (409)
..+|..+.++|++++.+ .| .|.+..+++-...|......|+..+.
T Consensus 5 ~v~G~~lv~~Gii~~~l-PG-------------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPL-PG-------------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcC-CC-------------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 47788888999988874 21 25566667777777777777776654
No 162
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=25.78 E-value=48 Score=20.85 Aligned_cols=18 Identities=33% Similarity=0.898 Sum_probs=10.2
Q ss_pred hhHHHHHhhhheeeeccc
Q 015299 319 LGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 319 iG~~li~~g~~l~~~~~~ 336 (409)
+|.++++.+.+++.|.++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 455556666666655443
No 163
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=25.42 E-value=6.9e+02 Score=24.97 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 015299 192 FLGSIFLIIATLAWASLFVLQTKALETYKNHQLSLTSLMCFVGTLQAIAVTF 243 (409)
Q Consensus 192 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 243 (409)
..|+++..+.=+++-+.-++.| ++ .||+++...-.......++.+++
T Consensus 299 KYgiLFI~LTF~~fflfE~~~~---~~--iHpiQY~LVGlAl~lFYlLLLSl 345 (430)
T PF06123_consen 299 KYGILFIGLTFLAFFLFELLSK---LR--IHPIQYLLVGLALVLFYLLLLSL 345 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---Cc--ccHHHHHHHHHHHHHHHHHHHHH
Confidence 3566665555444444444322 23 49988877666665555565555
No 164
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.99 E-value=4.7e+02 Score=22.91 Aligned_cols=14 Identities=21% Similarity=0.199 Sum_probs=6.9
Q ss_pred hhhHHHHHHHHHHH
Q 015299 143 VVGTAVTVAGAMIM 156 (409)
Q Consensus 143 ~~~~~i~~~Gv~li 156 (409)
+.++...+.|+.-.
T Consensus 89 ~~~if~~~~gi~~~ 102 (206)
T PF06570_consen 89 FFGIFSLLFGIMGF 102 (206)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444455555544
No 165
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=24.88 E-value=6.1e+02 Score=24.19 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=8.0
Q ss_pred hhhhhHHHHHhhhheee
Q 015299 316 GSVLGAILIVVGLYSVL 332 (409)
Q Consensus 316 ~~~iG~~li~~g~~l~~ 332 (409)
..++++++.+++.++..
T Consensus 370 ~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 370 IFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34445555555544433
No 166
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=24.66 E-value=99 Score=31.81 Aligned_cols=21 Identities=5% Similarity=0.058 Sum_probs=10.8
Q ss_pred hhhHHHHHhhhheeeeccccc
Q 015299 318 VLGAILIVVGLYSVLWGKHKE 338 (409)
Q Consensus 318 ~iG~~li~~g~~l~~~~~~~~ 338 (409)
.++++++++..+.+++..+++
T Consensus 533 giAcl~~l~~~~~iq~~l~~~ 553 (618)
T KOG3762|consen 533 GIACLVTLALFISIQLLLKRR 553 (618)
T ss_pred HHHHHHHHHHHHHhhhhhccc
Confidence 344445555666666544433
No 167
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=24.58 E-value=3.7e+02 Score=22.65 Aligned_cols=82 Identities=13% Similarity=0.177 Sum_probs=50.4
Q ss_pred hhhhHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-C
Q 015299 142 KVVGTAVTVAGAMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALETY-K 220 (409)
Q Consensus 142 ~~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~-~ 220 (409)
.-+++++++.|.=++...+--+ + ..+...+.+|..+.+.+.+..+......--++++. .
T Consensus 91 ~slAVV~AIFGLElLmvSQvcE---------d-----------~~SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vt 150 (184)
T PF15108_consen 91 GSLAVVVAIFGLELLMVSQVCE---------D-----------AHSRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVT 150 (184)
T ss_pred HHHHHHHHHHhHHHHHHHHHHh---------c-----------chhhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchh
Confidence 3567778888877666432100 1 12456778999998888877766554444444443 1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHH
Q 015299 221 NHQLSLTSLMCFVGTLQAIAVTF 243 (409)
Q Consensus 221 ~~~~~~~~~~~~~~~i~~~~~~~ 243 (409)
.-.+++++|.-+.+..+++.-.+
T Consensus 151 l~GFTL~fWCeFtAsFLfFLN~i 173 (184)
T PF15108_consen 151 LIGFTLMFWCEFTASFLFFLNGI 173 (184)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhh
Confidence 25667778877777766655443
No 168
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=24.45 E-value=2.7e+02 Score=20.35 Aligned_cols=45 Identities=7% Similarity=0.115 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHH
Q 015299 19 AMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAF 64 (409)
Q Consensus 19 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~a~i~l~~~~~ 64 (409)
+.+++.+.|.....+.+.- ...+..+.+.+.-+.++.++++-+..
T Consensus 25 LtvLs~~~w~iWw~~f~d~-P~sieSIALl~~~~AfsgLL~lHLvv 69 (77)
T PF12292_consen 25 LTVLSVLSWPIWWFFFRDT-PTSIESIALLFFCFAFSGLLFLHLVV 69 (77)
T ss_pred HHHHHHHHHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888888888877 56777777788777777777766543
No 169
>COG4237 HyfE Hydrogenase 4 membrane component (E) [Energy production and conversion]
Probab=23.85 E-value=5e+02 Score=22.76 Aligned_cols=66 Identities=11% Similarity=0.089 Sum_probs=41.9
Q ss_pred HHHhhhcccCchhhhhhcchhHHHHHHHHHHHhhhhcccccccccchhhhHHHHHHHHHHHHHhcCC
Q 015299 96 FYYAGLKFTSPTFSCAMSNMLPAMTFVMAVICRMEKINMKKVRCQAKVVGTAVTVAGAMIMTLYKGP 162 (409)
Q Consensus 96 ~~~~al~~~~~~~~~ii~~~~pi~~~lls~l~l~e~~~~~~~~~~~~~~~~~i~~~Gv~li~~~~~~ 162 (409)
+.+.+.++.-.+.+.++.- .-+...++..-..+||.+.+|+.-....+..+++..++.++.+..-|
T Consensus 51 i~~~s~~liilgi~viilR-allvp~~L~ra~~ke~~~~rE~~~lln~a~slla~~iv~l~af~~~~ 116 (218)
T COG4237 51 ILFASEDLIILGISVIILR-ALLVPLFLTRAARKEKQNIREKALLLNLAFSLLAALIVYLCAFVVIP 116 (218)
T ss_pred HHhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHHHHHHhcccc
Confidence 3455666666666555543 22445667777788999888755444556677777888888764433
No 170
>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains. They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].
Probab=23.46 E-value=89 Score=27.69 Aligned_cols=6 Identities=33% Similarity=0.556 Sum_probs=3.0
Q ss_pred ccccCC
Q 015299 404 EVHQQP 409 (409)
Q Consensus 404 ~~~~~~ 409 (409)
-||.||
T Consensus 166 a~qlqP 171 (221)
T PF08374_consen 166 AFQLQP 171 (221)
T ss_pred ceeccC
Confidence 355554
No 171
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=23.09 E-value=7.7e+02 Score=24.67 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=24.5
Q ss_pred chhhHHHHHHHHHHHH-hccccchhhhhhHHHHHhhhheeeeccc
Q 015299 293 FSPLMMIIVAIMGSFI-LAENIYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 293 ~~~l~pv~a~l~~~~~-~~e~~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
....-++++.++..++ +...+ ...+.|.+++..|..++.+.++
T Consensus 394 ~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~~~~~ 437 (473)
T TIGR00905 394 KALIVGVIACVYSIWLLYAAGL-KYLLLGFILYAPGIIFYGRARK 437 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555544443 33322 3456788888899777665444
No 172
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=21.78 E-value=8.4e+02 Score=24.63 Aligned_cols=24 Identities=8% Similarity=0.224 Sum_probs=19.0
Q ss_pred cchhhhhhHHHHHhhhheeeeccc
Q 015299 313 IYLGSVLGAILIVVGLYSVLWGKH 336 (409)
Q Consensus 313 ~~~~~~iG~~li~~g~~l~~~~~~ 336 (409)
++..|++...++++|++++.+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 678899999999999877665433
No 173
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=21.57 E-value=5.5e+02 Score=22.44 Aligned_cols=18 Identities=22% Similarity=0.307 Sum_probs=12.0
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 015299 190 DWFLGSIFLIIATLAWAS 207 (409)
Q Consensus 190 ~~~~G~~~~l~aa~~~a~ 207 (409)
...+|..+.+++.+.+..
T Consensus 43 a~TLGv~LILlgv~l~~~ 60 (197)
T PRK12585 43 SNTFGVSLLLFATVGYFF 60 (197)
T ss_pred chhhhHHHHHHHHHHHHH
Confidence 346788888877766543
No 174
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=21.48 E-value=6.1e+02 Score=22.91 Aligned_cols=113 Identities=10% Similarity=0.049 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhhhcchhHHHHHHHHHH-HhhhhcccccccccchhhhHHHHHHH
Q 015299 74 ITFKVFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVI-CRMEKINMKKVRCQAKVVGTAVTVAG 152 (409)
Q Consensus 74 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~lls~l-~l~e~~~~~~~~~~~~~~~~~i~~~G 152 (409)
.+..........++.+..++..+..|+-.--+......+..+.-+|...-.+- ..|+.++... + .+.+++.|
T Consensus 83 ~~~~~~~~~~~t~l~G~tL~~i~~~Y~~~~~~~~i~~af~~t~~~F~~ls~~g~~tk~Dls~l~-----~--~l~~alig 155 (233)
T COG0670 83 SPTALILFFVYTALVGLTLSPILLVYAAISGGDAIAAAFGITALVFGALSLYGYTTKRDLSSLG-----S--FLFMALIG 155 (233)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-----H--HHHHHHHH
Confidence 34455555666666666666666666655544334445544444443332222 2344455442 2 23333444
Q ss_pred HHHHHHhcCCccccccccCCCCCCCCCcCcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015299 153 AMIMTLYKGPIVELFWTQHAHPHDKSDATTSTASSEKDWFLGSIFLIIATLAWASLFVLQTKALET 218 (409)
Q Consensus 153 v~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~ 218 (409)
+++..... - --....+..+...++.+.++.+..+.....++
T Consensus 156 Liiasvvn-~------------------------Fl~s~~l~~~IS~lgvlifsgli~yDtq~I~~ 196 (233)
T COG0670 156 LIIASLVN-I------------------------FLGSSALHLAISVLGVLIFSGLIAYDTQNIKR 196 (233)
T ss_pred HHHHHHHH-H------------------------HHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333211 0 01122678889999999999999998776666
No 175
>PRK14778 lipoprotein signal peptidase; Provisional
Probab=21.17 E-value=97 Score=26.98 Aligned_cols=11 Identities=27% Similarity=0.939 Sum_probs=5.6
Q ss_pred hhhHHHHHhhh
Q 015299 318 VLGAILIVVGL 328 (409)
Q Consensus 318 ~iG~~li~~g~ 328 (409)
.+|+++++...
T Consensus 124 ~iGv~llll~~ 134 (186)
T PRK14778 124 IVGGALMILGV 134 (186)
T ss_pred HHHHHHHHHHH
Confidence 45555555543
No 176
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=20.89 E-value=1e+03 Score=25.30 Aligned_cols=23 Identities=4% Similarity=-0.169 Sum_probs=10.5
Q ss_pred CCCChHHHHHHHHHHHHHHHHHH
Q 015299 40 RGMSHYVLVVYRHAFATAVIAPF 62 (409)
Q Consensus 40 ~~~~~~~~~~~r~~~a~i~l~~~ 62 (409)
..++.......-.++++++++..
T Consensus 270 ~s~~~~~~~~~~~~v~~li~lf~ 292 (700)
T COG1480 270 LSVNILPLLGLLILVIFLILLFA 292 (700)
T ss_pred ccccHHHHHHHHHHHHHHHHHHH
Confidence 44555555444444444444333
No 177
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=20.24 E-value=89 Score=18.29 Aligned_cols=17 Identities=29% Similarity=0.296 Sum_probs=9.0
Q ss_pred chhhhhhHHHHHhhhhe
Q 015299 314 YLGSVLGAILIVVGLYS 330 (409)
Q Consensus 314 ~~~~~iG~~li~~g~~l 330 (409)
++..++|.+++..+.++
T Consensus 11 ~~~~~~G~~l~~~~~~~ 27 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGLL 27 (34)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45566777554444433
No 178
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=20.04 E-value=36 Score=25.38 Aligned_cols=27 Identities=26% Similarity=0.265 Sum_probs=20.7
Q ss_pred ccchhhhhhHHHHHhhhheeeeccccc
Q 015299 312 NIYLGSVLGAILIVVGLYSVLWGKHKE 338 (409)
Q Consensus 312 ~~~~~~~iG~~li~~g~~l~~~~~~~~ 338 (409)
..++..++|.+++++|..++..+..++
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~P 30 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFRP 30 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 457889999999999988887544333
No 179
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=20.01 E-value=7.5e+02 Score=23.39 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=16.6
Q ss_pred hcCCCcccccccchhHHHHHHHHHHHhHHHHHHH
Q 015299 245 IEHKPSVWQIGWDMNLLAAAYAGIVTSSISYFVQ 278 (409)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~ 278 (409)
+.+.+.+....+-.+....+..|.+....+|+.+
T Consensus 137 YTgGp~PlgY~gLGEi~~~vffG~l~v~g~~yiq 170 (303)
T COG1575 137 YTGGPFPLGYMGLGEIFVGVFFGPLIVLGAYYIQ 170 (303)
T ss_pred eccCCcCcccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333333355566666666555555554
Done!