Query 015303
Match_columns 409
No_of_seqs 208 out of 2030
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 10:14:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015303.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015303hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 2.6E-50 8.9E-55 380.7 34.5 366 3-391 22-389 (407)
2 2qa1_A PGAE, polyketide oxygen 100.0 7.2E-43 2.5E-47 336.2 36.8 349 2-388 9-364 (500)
3 4hb9_A Similarities with proba 100.0 9E-44 3.1E-48 336.8 29.9 349 5-370 2-382 (412)
4 2qa2_A CABE, polyketide oxygen 100.0 9.5E-43 3.2E-47 335.3 35.5 348 3-388 11-365 (499)
5 2x3n_A Probable FAD-dependent 100.0 6.6E-44 2.3E-48 336.1 26.4 356 4-388 6-374 (399)
6 2xdo_A TETX2 protein; tetracyc 100.0 2.6E-42 9E-47 324.8 32.9 354 2-381 24-395 (398)
7 2vou_A 2,6-dihydroxypyridine h 100.0 2.7E-42 9.4E-47 324.5 32.8 337 3-375 4-371 (397)
8 3fmw_A Oxygenase; mithramycin, 100.0 7E-43 2.4E-47 340.4 27.8 352 4-388 49-410 (570)
9 3c96_A Flavin-containing monoo 100.0 1.7E-41 5.9E-46 320.4 28.7 339 1-366 1-366 (410)
10 2r0c_A REBC; flavin adenine di 100.0 3E-41 1E-45 329.1 29.4 355 4-390 26-408 (549)
11 3ihg_A RDME; flavoenzyme, anth 100.0 8.2E-41 2.8E-45 326.2 31.9 348 1-373 1-374 (535)
12 1pn0_A Phenol 2-monooxygenase; 100.0 3E-41 1E-45 334.7 29.1 347 4-375 8-426 (665)
13 3alj_A 2-methyl-3-hydroxypyrid 100.0 7.7E-42 2.6E-46 319.6 20.2 324 4-365 11-343 (379)
14 1k0i_A P-hydroxybenzoate hydro 100.0 8.7E-41 3E-45 314.3 26.4 356 4-390 2-371 (394)
15 2dkh_A 3-hydroxybenzoate hydro 100.0 8.4E-40 2.9E-44 324.0 28.7 347 3-375 31-417 (639)
16 3oz2_A Digeranylgeranylglycero 100.0 1.1E-38 3.8E-43 300.2 29.6 331 2-365 2-343 (397)
17 3e1t_A Halogenase; flavoprotei 100.0 8.3E-38 2.8E-42 302.8 30.9 352 4-373 7-370 (512)
18 3i3l_A Alkylhalidase CMLS; fla 100.0 9.3E-37 3.2E-41 297.6 34.2 347 1-369 20-378 (591)
19 3cgv_A Geranylgeranyl reductas 100.0 1.9E-36 6.3E-41 285.2 31.5 338 2-374 2-352 (397)
20 3atr_A Conserved archaeal prot 100.0 1.8E-36 6.2E-41 289.5 23.6 330 3-373 5-356 (453)
21 3nix_A Flavoprotein/dehydrogen 100.0 2.5E-35 8.7E-40 279.6 30.3 314 1-328 1-329 (421)
22 3c4a_A Probable tryptophan hyd 100.0 8.4E-37 2.9E-41 285.4 12.1 334 5-388 1-352 (381)
23 2pyx_A Tryptophan halogenase; 100.0 6.6E-32 2.3E-36 262.3 30.5 333 3-371 6-414 (526)
24 2gmh_A Electron transfer flavo 100.0 1.8E-31 6.1E-36 261.3 32.8 349 4-381 35-435 (584)
25 2weu_A Tryptophan 5-halogenase 100.0 5.2E-31 1.8E-35 255.7 29.3 328 5-372 3-407 (511)
26 2aqj_A Tryptophan halogenase, 100.0 8.7E-31 3E-35 255.3 27.0 328 2-370 3-397 (538)
27 2e4g_A Tryptophan halogenase; 100.0 2.2E-30 7.4E-35 252.7 28.7 331 3-373 24-431 (550)
28 3ihm_A Styrene monooxygenase A 100.0 7.8E-29 2.7E-33 234.7 22.0 327 4-369 22-375 (430)
29 2bry_A NEDD9 interacting prote 99.9 7E-25 2.4E-29 210.8 14.8 139 3-171 91-239 (497)
30 1yvv_A Amine oxidase, flavin-c 99.9 7E-21 2.4E-25 174.6 24.5 296 4-328 2-330 (336)
31 1ryi_A Glycine oxidase; flavop 99.7 5.1E-17 1.7E-21 151.6 14.8 194 104-323 160-361 (382)
32 1y56_B Sarcosine oxidase; dehy 99.7 1.9E-15 6.4E-20 140.9 22.5 67 104-171 145-215 (382)
33 3nyc_A D-arginine dehydrogenas 99.7 2.1E-15 7.1E-20 140.5 20.2 68 103-171 149-219 (381)
34 2gag_B Heterotetrameric sarcos 99.7 3.9E-15 1.3E-19 139.9 21.5 70 104-174 170-243 (405)
35 2oln_A NIKD protein; flavoprot 99.7 1.8E-14 6E-19 135.0 25.8 172 1-173 1-220 (397)
36 3dme_A Conserved exported prot 99.7 2E-15 6.8E-20 139.9 18.9 68 104-171 146-220 (369)
37 3dje_A Fructosyl amine: oxygen 99.7 2.2E-15 7.5E-20 143.1 19.1 61 103-163 156-222 (438)
38 3ps9_A TRNA 5-methylaminomethy 99.7 2.5E-15 8.6E-20 150.1 19.7 61 103-163 412-474 (676)
39 3kkj_A Amine oxidase, flavin-c 99.7 3E-15 1E-19 133.6 18.4 36 4-39 2-37 (336)
40 2gf3_A MSOX, monomeric sarcosi 99.7 2.2E-14 7.7E-19 133.9 24.1 166 3-169 2-213 (389)
41 3pvc_A TRNA 5-methylaminomethy 99.7 2.5E-15 8.5E-20 150.3 17.7 60 104-163 408-470 (689)
42 2qcu_A Aerobic glycerol-3-phos 99.6 1.2E-13 4.1E-18 133.0 25.5 212 104-325 145-373 (501)
43 3i6d_A Protoporphyrinogen oxid 99.6 1E-13 3.6E-18 132.7 24.1 203 109-325 236-468 (470)
44 3v76_A Flavoprotein; structura 99.6 9.3E-15 3.2E-19 136.8 15.5 151 2-171 25-207 (417)
45 3da1_A Glycerol-3-phosphate de 99.6 2.4E-14 8.1E-19 139.4 16.5 68 104-171 166-242 (561)
46 2uzz_A N-methyl-L-tryptophan o 99.6 2.4E-13 8.2E-18 126.1 20.8 59 104-163 145-205 (372)
47 3qj4_A Renalase; FAD/NAD(P)-bi 99.5 6.8E-13 2.3E-17 121.6 21.4 143 5-161 2-164 (342)
48 2i0z_A NAD(FAD)-utilizing dehy 99.5 1.2E-14 4E-19 138.1 8.9 162 4-172 26-212 (447)
49 3axb_A Putative oxidoreductase 99.5 1.1E-12 3.8E-17 124.8 22.6 69 104-173 177-266 (448)
50 2gqf_A Hypothetical protein HI 99.5 3.5E-15 1.2E-19 139.3 4.8 150 1-172 1-189 (401)
51 4a9w_A Monooxygenase; baeyer-v 99.5 1.7E-13 5.9E-18 126.2 13.5 129 3-163 2-133 (357)
52 4dgk_A Phytoene dehydrogenase; 99.5 9.5E-13 3.2E-17 127.2 18.0 62 108-169 221-285 (501)
53 3nlc_A Uncharacterized protein 99.5 5.3E-13 1.8E-17 128.4 15.7 162 4-171 107-290 (549)
54 3ka7_A Oxidoreductase; structu 99.5 7.3E-12 2.5E-16 118.3 22.4 58 109-168 197-257 (425)
55 3lov_A Protoporphyrinogen oxid 99.5 1.8E-11 6.2E-16 117.3 25.2 56 109-165 237-292 (475)
56 3c4n_A Uncharacterized protein 99.5 3.6E-13 1.2E-17 126.3 12.5 168 4-173 36-249 (405)
57 1rp0_A ARA6, thiazole biosynth 99.5 9.4E-13 3.2E-17 117.1 14.6 132 4-167 39-196 (284)
58 2ywl_A Thioredoxin reductase r 99.5 8.9E-13 3E-17 109.0 13.4 116 5-171 2-119 (180)
59 3jsk_A Cypbp37 protein; octame 99.5 4.5E-13 1.5E-17 120.3 11.9 132 4-167 79-256 (344)
60 2cul_A Glucose-inhibited divis 99.4 4.9E-13 1.7E-17 115.3 11.4 128 3-170 2-133 (232)
61 2zbw_A Thioredoxin reductase; 99.4 5E-13 1.7E-17 122.1 11.9 123 2-168 3-127 (335)
62 3ab1_A Ferredoxin--NADP reduct 99.4 4E-13 1.4E-17 124.0 10.9 124 1-168 11-137 (360)
63 1c0p_A D-amino acid oxidase; a 99.4 1.8E-12 6E-17 119.9 15.1 38 1-38 3-40 (363)
64 3nrn_A Uncharacterized protein 99.4 4.2E-12 1.4E-16 119.8 17.3 58 109-169 190-249 (421)
65 1pj5_A N,N-dimethylglycine oxi 99.4 8.1E-12 2.8E-16 127.6 20.4 70 103-173 146-219 (830)
66 3cp8_A TRNA uridine 5-carboxym 99.4 1.3E-12 4.5E-17 126.6 13.5 146 3-164 20-176 (641)
67 3ces_A MNMG, tRNA uridine 5-ca 99.4 1.3E-12 4.3E-17 126.8 11.5 150 3-167 27-186 (651)
68 1qo8_A Flavocytochrome C3 fuma 99.4 2E-12 6.7E-17 126.5 12.8 155 3-168 120-318 (566)
69 2gv8_A Monooxygenase; FMO, FAD 99.4 1.8E-12 6.2E-17 123.1 12.2 155 2-163 4-178 (447)
70 3k7m_X 6-hydroxy-L-nicotine ox 99.4 2.3E-11 7.9E-16 115.1 19.2 40 122-161 219-258 (431)
71 2zxi_A TRNA uridine 5-carboxym 99.4 3.6E-12 1.2E-16 123.1 13.5 147 4-165 27-183 (637)
72 2ivd_A PPO, PPOX, protoporphyr 99.4 2.9E-10 1E-14 109.0 26.8 55 108-163 238-295 (478)
73 1s3e_A Amine oxidase [flavin-c 99.4 1.1E-10 3.7E-15 113.2 23.0 54 109-163 216-269 (520)
74 3fbs_A Oxidoreductase; structu 99.3 1.1E-11 3.9E-16 110.9 13.8 108 5-163 3-113 (297)
75 2gjc_A Thiazole biosynthetic e 99.3 7E-12 2.4E-16 111.9 11.5 133 4-168 65-245 (326)
76 4fk1_A Putative thioredoxin re 99.3 1.3E-11 4.3E-16 111.1 13.2 109 2-161 4-116 (304)
77 1y0p_A Fumarate reductase flav 99.3 1.3E-11 4.5E-16 120.8 14.2 149 4-165 126-320 (571)
78 2rgh_A Alpha-glycerophosphate 99.3 1.3E-10 4.6E-15 113.3 21.0 67 104-170 184-259 (571)
79 3f8d_A Thioredoxin reductase ( 99.3 1.2E-11 4.1E-16 112.2 12.6 109 4-162 15-125 (323)
80 1vdc_A NTR, NADPH dependent th 99.3 4.2E-12 1.4E-16 115.9 9.3 118 3-164 7-126 (333)
81 2q0l_A TRXR, thioredoxin reduc 99.3 2.2E-11 7.5E-16 109.9 13.7 112 5-164 2-116 (311)
82 3cty_A Thioredoxin reductase; 99.3 2.2E-11 7.6E-16 110.3 13.3 113 1-163 13-127 (319)
83 3itj_A Thioredoxin reductase 1 99.3 1.3E-11 4.3E-16 112.8 11.7 118 3-163 21-143 (338)
84 3gwf_A Cyclohexanone monooxyge 99.3 3E-11 1E-15 116.9 14.4 133 4-163 8-148 (540)
85 2vvm_A Monoamine oxidase N; FA 99.3 1E-10 3.4E-15 112.7 17.8 55 109-163 256-313 (495)
86 3nks_A Protoporphyrinogen oxid 99.3 2E-10 7E-15 110.0 19.8 53 110-163 236-291 (477)
87 1w4x_A Phenylacetone monooxyge 99.3 2.1E-11 7.2E-16 118.5 12.7 134 3-163 15-155 (542)
88 2q7v_A Thioredoxin reductase; 99.3 2.7E-11 9.3E-16 110.0 12.6 113 3-163 7-124 (325)
89 1trb_A Thioredoxin reductase; 99.3 2.1E-11 7E-16 110.6 11.1 114 1-163 2-117 (320)
90 3d1c_A Flavin-containing putat 99.2 3.3E-11 1.1E-15 111.5 11.9 138 3-162 3-143 (369)
91 2xve_A Flavin-containing monoo 99.2 4.3E-11 1.5E-15 114.0 12.9 146 5-164 3-168 (464)
92 3g3e_A D-amino-acid oxidase; F 99.2 5.2E-11 1.8E-15 109.4 13.0 34 5-38 1-40 (351)
93 2a87_A TRXR, TR, thioredoxin r 99.2 3.9E-11 1.3E-15 109.5 11.8 113 2-163 12-127 (335)
94 1sez_A Protoporphyrinogen oxid 99.2 5.9E-10 2E-14 107.6 20.5 64 1-64 10-88 (504)
95 3uox_A Otemo; baeyer-villiger 99.2 2.9E-11 9.9E-16 117.1 10.9 133 3-163 8-148 (545)
96 4ap3_A Steroid monooxygenase; 99.2 7.6E-11 2.6E-15 114.3 13.6 133 3-162 20-159 (549)
97 3lzw_A Ferredoxin--NADP reduct 99.2 3.6E-11 1.2E-15 109.4 10.7 114 4-162 7-123 (332)
98 1fl2_A Alkyl hydroperoxide red 99.2 5.7E-11 1.9E-15 107.1 11.6 111 4-163 1-116 (310)
99 4gut_A Lysine-specific histone 99.2 4.1E-11 1.4E-15 120.1 11.6 50 109-161 535-584 (776)
100 4at0_A 3-ketosteroid-delta4-5a 99.2 2.1E-10 7E-15 110.7 14.3 37 3-39 40-76 (510)
101 4a5l_A Thioredoxin reductase; 99.2 8.5E-11 2.9E-15 106.1 10.7 119 1-162 1-121 (314)
102 1kf6_A Fumarate reductase flav 99.1 6.9E-10 2.4E-14 108.7 15.2 61 108-168 134-203 (602)
103 3s5w_A L-ornithine 5-monooxyge 99.1 5.1E-10 1.7E-14 106.8 13.9 145 4-162 30-192 (463)
104 1d4d_A Flavocytochrome C fumar 99.1 6.1E-10 2.1E-14 108.8 14.5 36 4-39 126-161 (572)
105 1hyu_A AHPF, alkyl hydroperoxi 99.1 3.8E-10 1.3E-14 109.0 12.7 112 3-163 211-327 (521)
106 1ojt_A Surface protein; redox- 99.1 1.4E-10 4.9E-15 111.1 8.5 39 1-39 3-41 (482)
107 1chu_A Protein (L-aspartate ox 99.1 2.3E-10 7.8E-15 110.8 9.5 35 4-39 8-42 (540)
108 1v59_A Dihydrolipoamide dehydr 99.1 9.6E-11 3.3E-15 112.3 6.8 146 1-162 2-157 (478)
109 1rsg_A FMS1 protein; FAD bindi 99.1 1E-09 3.5E-14 106.2 13.0 56 107-162 201-257 (516)
110 4gcm_A TRXR, thioredoxin reduc 99.1 1.2E-09 4.3E-14 98.4 12.8 36 1-36 2-38 (312)
111 1q1r_A Putidaredoxin reductase 99.1 6.4E-10 2.2E-14 104.9 11.2 113 1-163 1-115 (431)
112 3l8k_A Dihydrolipoyl dehydroge 99.1 6E-10 2E-14 106.3 10.7 38 1-38 1-38 (466)
113 2e5v_A L-aspartate oxidase; ar 99.1 1.5E-09 5.3E-14 103.4 13.4 59 108-167 119-181 (472)
114 2a8x_A Dihydrolipoyl dehydroge 99.0 2E-10 7E-15 109.5 6.9 140 3-164 2-148 (464)
115 2h88_A Succinate dehydrogenase 99.0 2.5E-09 8.6E-14 104.7 14.3 57 108-164 155-219 (621)
116 2jae_A L-amino acid oxidase; o 99.0 2.7E-09 9.2E-14 102.6 13.9 54 108-161 239-295 (489)
117 1dxl_A Dihydrolipoamide dehydr 99.0 9.1E-10 3.1E-14 105.3 10.3 149 2-165 4-154 (470)
118 2wdq_A Succinate dehydrogenase 99.0 3E-09 1E-13 104.0 13.8 36 4-39 7-42 (588)
119 2bs2_A Quinol-fumarate reducta 99.0 3.6E-09 1.2E-13 104.3 13.9 36 4-39 5-40 (660)
120 3r9u_A Thioredoxin reductase; 99.0 4.5E-09 1.5E-13 94.7 13.4 109 3-161 3-117 (315)
121 2yg5_A Putrescine oxidase; oxi 99.0 5.1E-09 1.7E-13 99.6 14.1 52 109-162 216-268 (453)
122 3o0h_A Glutathione reductase; 99.0 4E-09 1.4E-13 101.1 12.8 45 120-164 246-290 (484)
123 3urh_A Dihydrolipoyl dehydroge 98.9 2.1E-09 7.3E-14 103.2 10.0 37 2-38 23-59 (491)
124 2b9w_A Putative aminooxidase; 98.9 1.5E-08 5.1E-13 95.5 15.1 54 108-163 206-259 (424)
125 3iwa_A FAD-dependent pyridine 98.9 2.4E-09 8.1E-14 102.4 9.1 117 4-161 3-124 (472)
126 3kd9_A Coenzyme A disulfide re 98.9 4.9E-09 1.7E-13 99.5 10.6 109 3-161 2-113 (449)
127 3lxd_A FAD-dependent pyridine 98.9 2.2E-09 7.7E-14 100.8 8.1 109 3-161 8-118 (415)
128 3sx6_A Sulfide-quinone reducta 98.9 1.4E-09 4.7E-14 102.9 6.2 111 1-164 1-114 (437)
129 2bc0_A NADH oxidase; flavoprot 98.9 5.9E-09 2E-13 100.0 10.5 111 4-162 35-149 (490)
130 1ebd_A E3BD, dihydrolipoamide 98.9 4.9E-09 1.7E-13 99.7 9.6 33 4-36 3-35 (455)
131 1zmd_A Dihydrolipoyl dehydroge 98.9 6E-09 2E-13 99.6 10.2 36 3-38 5-40 (474)
132 3cgb_A Pyridine nucleotide-dis 98.9 1.5E-08 5E-13 97.0 12.3 111 5-162 37-152 (480)
133 1zk7_A HGII, reductase, mercur 98.9 1.2E-08 4.1E-13 97.4 11.5 36 1-36 1-36 (467)
134 3klj_A NAD(FAD)-dependent dehy 98.9 1.7E-08 5.9E-13 93.5 12.0 107 4-161 9-115 (385)
135 1jnr_A Adenylylsulfate reducta 98.8 1E-08 3.5E-13 101.4 11.0 36 4-39 22-61 (643)
136 3oc4_A Oxidoreductase, pyridin 98.8 1.1E-08 3.6E-13 97.2 10.6 110 5-162 3-115 (452)
137 2yqu_A 2-oxoglutarate dehydrog 98.8 5E-09 1.7E-13 99.6 7.9 35 4-38 1-35 (455)
138 2z3y_A Lysine-specific histone 98.8 1.5E-06 5.1E-11 86.3 25.7 36 4-39 107-142 (662)
139 3p1w_A Rabgdi protein; GDI RAB 98.8 3.6E-08 1.2E-12 92.9 13.3 39 1-39 17-55 (475)
140 2qae_A Lipoamide, dihydrolipoy 98.8 6.6E-09 2.3E-13 99.2 8.3 35 4-38 2-36 (468)
141 3ics_A Coenzyme A-disulfide re 98.8 1.7E-08 5.7E-13 99.3 11.3 111 4-161 36-151 (588)
142 3gyx_A Adenylylsulfate reducta 98.8 2.5E-08 8.7E-13 98.3 12.4 36 4-39 22-63 (662)
143 1b37_A Protein (polyamine oxid 98.8 4.5E-08 1.6E-12 93.5 13.9 55 108-162 206-270 (472)
144 3ef6_A Toluene 1,2-dioxygenase 98.8 3.5E-08 1.2E-12 92.4 12.7 106 5-161 3-110 (410)
145 3lad_A Dihydrolipoamide dehydr 98.8 1E-08 3.5E-13 98.1 8.8 36 3-38 2-37 (476)
146 2v3a_A Rubredoxin reductase; a 98.8 1E-08 3.6E-13 95.2 8.5 111 1-162 1-113 (384)
147 4dna_A Probable glutathione re 98.8 3.1E-08 1.1E-12 94.3 11.6 44 119-163 224-269 (463)
148 2gqw_A Ferredoxin reductase; f 98.8 4.9E-08 1.7E-12 91.3 12.4 105 4-162 7-113 (408)
149 2v3a_A Rubredoxin reductase; a 98.8 5.4E-08 1.8E-12 90.3 12.6 108 4-171 145-254 (384)
150 3fg2_P Putative rubredoxin red 98.8 1E-08 3.4E-13 95.9 7.5 106 5-161 2-109 (404)
151 1nhp_A NADH peroxidase; oxidor 98.8 4.4E-08 1.5E-12 92.9 12.0 110 5-162 1-115 (447)
152 2cdu_A NADPH oxidase; flavoenz 98.8 3.2E-08 1.1E-12 94.0 11.0 112 5-162 1-117 (452)
153 3qfa_A Thioredoxin reductase 1 98.8 2.4E-08 8.1E-13 96.4 10.2 35 3-37 31-65 (519)
154 1m6i_A Programmed cell death p 98.7 2.2E-08 7.4E-13 96.1 9.2 135 1-162 8-144 (493)
155 3h8l_A NADH oxidase; membrane 98.7 1.4E-08 4.8E-13 95.2 7.4 34 5-38 2-38 (409)
156 1xhc_A NADH oxidase /nitrite r 98.7 4.8E-08 1.6E-12 90.0 10.8 104 5-161 9-112 (367)
157 1mo9_A ORF3; nucleotide bindin 98.7 7E-08 2.4E-12 93.3 12.4 37 2-38 41-77 (523)
158 4b63_A L-ornithine N5 monooxyg 98.7 3E-08 1E-12 95.2 9.6 58 104-161 141-213 (501)
159 1xdi_A RV3303C-LPDA; reductase 98.7 1.4E-08 4.9E-13 97.6 7.2 34 4-37 2-38 (499)
160 2hqm_A GR, grase, glutathione 98.7 2.5E-08 8.6E-13 95.4 8.6 36 2-37 9-44 (479)
161 3hyw_A Sulfide-quinone reducta 98.7 6.1E-08 2.1E-12 91.3 10.9 104 5-161 3-108 (430)
162 3h28_A Sulfide-quinone reducta 98.7 8.8E-08 3E-12 90.3 11.7 105 5-162 3-109 (430)
163 2iid_A L-amino-acid oxidase; f 98.7 1.1E-07 3.7E-12 91.5 12.5 52 109-161 242-297 (498)
164 2yqu_A 2-oxoglutarate dehydrog 98.7 1.5E-07 5.2E-12 89.4 13.3 99 5-164 168-266 (455)
165 3ntd_A FAD-dependent pyridine 98.7 8.1E-08 2.8E-12 93.9 11.7 110 5-161 2-116 (565)
166 2eq6_A Pyruvate dehydrogenase 98.7 3.2E-08 1.1E-12 94.3 8.5 34 4-37 6-39 (464)
167 2eq6_A Pyruvate dehydrogenase 98.7 1.4E-07 4.9E-12 89.7 12.2 99 5-164 170-273 (464)
168 2r9z_A Glutathione amide reduc 98.7 6.1E-08 2.1E-12 92.2 9.6 37 1-37 1-37 (463)
169 3pl8_A Pyranose 2-oxidase; sub 98.6 6.9E-07 2.4E-11 87.8 16.1 40 1-40 43-82 (623)
170 1ges_A Glutathione reductase; 98.6 2.8E-07 9.7E-12 87.3 12.6 99 5-164 168-267 (450)
171 3dk9_A Grase, GR, glutathione 98.6 7.6E-08 2.6E-12 92.0 8.7 35 3-37 19-53 (478)
172 1y56_A Hypothetical protein PH 98.6 5.4E-08 1.8E-12 93.3 7.4 108 4-162 108-219 (493)
173 3k30_A Histamine dehydrogenase 98.6 9.9E-08 3.4E-12 95.4 9.4 37 3-39 390-426 (690)
174 3dgh_A TRXR-1, thioredoxin red 98.6 2.2E-07 7.4E-12 89.0 11.0 34 3-36 8-41 (483)
175 3fpz_A Thiazole biosynthetic e 98.6 6E-08 2.1E-12 87.9 6.7 37 4-40 65-103 (326)
176 2r9z_A Glutathione amide reduc 98.6 5.7E-07 1.9E-11 85.5 13.7 99 5-164 167-266 (463)
177 3dgz_A Thioredoxin reductase 2 98.6 8.6E-08 2.9E-12 91.9 7.9 35 3-37 5-39 (488)
178 1fec_A Trypanothione reductase 98.6 1.5E-07 5.3E-12 90.1 9.1 33 3-35 2-35 (490)
179 4eqs_A Coenzyme A disulfide re 98.5 5.8E-07 2E-11 84.7 12.5 110 6-162 2-116 (437)
180 1nhp_A NADH peroxidase; oxidor 98.5 6.7E-07 2.3E-11 84.7 11.9 99 4-163 149-247 (447)
181 1lvl_A Dihydrolipoamide dehydr 98.5 2E-07 6.9E-12 88.5 8.3 34 3-36 4-37 (458)
182 3vrd_B FCCB subunit, flavocyto 98.5 8E-07 2.7E-11 82.9 12.2 104 5-162 3-108 (401)
183 3g5s_A Methylenetetrahydrofola 98.5 2.2E-07 7.5E-12 84.0 7.8 34 5-38 2-35 (443)
184 2bcg_G Secretory pathway GDP d 98.5 1.1E-07 3.9E-12 90.1 6.3 38 2-39 9-46 (453)
185 1ebd_A E3BD, dihydrolipoamide 98.5 7.6E-07 2.6E-11 84.5 11.8 98 5-163 171-271 (455)
186 4g6h_A Rotenone-insensitive NA 98.5 4.1E-07 1.4E-11 87.2 9.5 35 4-38 42-76 (502)
187 4gde_A UDP-galactopyranose mut 98.5 9.1E-08 3.1E-12 92.4 4.8 52 108-161 222-275 (513)
188 1v59_A Dihydrolipoamide dehydr 98.5 8.3E-07 2.9E-11 84.8 11.3 99 5-164 184-289 (478)
189 2hqm_A GR, grase, glutathione 98.4 1.7E-06 5.9E-11 82.6 13.0 99 5-164 186-287 (479)
190 3fg2_P Putative rubredoxin red 98.4 1.6E-06 5.6E-11 80.9 12.2 107 5-171 143-252 (404)
191 3lxd_A FAD-dependent pyridine 98.4 1.8E-06 6.1E-11 80.9 12.4 100 4-163 152-252 (415)
192 1v0j_A UDP-galactopyranose mut 98.4 2.5E-07 8.5E-12 86.2 6.3 39 1-39 4-43 (399)
193 3ef6_A Toluene 1,2-dioxygenase 98.4 1E-06 3.5E-11 82.4 10.5 108 4-171 143-252 (410)
194 4b1b_A TRXR, thioredoxin reduc 98.4 1E-06 3.6E-11 84.8 10.1 35 4-38 42-76 (542)
195 2gag_A Heterotetrameric sarcos 98.4 8.3E-07 2.8E-11 91.7 10.0 36 4-39 128-163 (965)
196 3oc4_A Oxidoreductase, pyridin 98.4 2.4E-06 8.2E-11 81.0 12.2 97 5-162 148-244 (452)
197 1mo9_A ORF3; nucleotide bindin 98.4 2.9E-06 9.8E-11 82.0 12.6 99 5-164 215-318 (523)
198 3iwa_A FAD-dependent pyridine 98.4 2.1E-06 7.2E-11 81.9 11.4 107 5-171 160-269 (472)
199 1ojt_A Surface protein; redox- 98.3 2.4E-06 8.1E-11 81.7 11.5 99 5-164 186-288 (482)
200 2gqw_A Ferredoxin reductase; f 98.3 3.8E-06 1.3E-10 78.5 12.1 104 4-171 145-250 (408)
201 1lvl_A Dihydrolipoamide dehydr 98.3 3E-06 1E-10 80.5 11.6 96 5-163 172-269 (458)
202 3ntd_A FAD-dependent pyridine 98.3 3.9E-06 1.3E-10 82.0 12.7 98 5-163 152-268 (565)
203 1fec_A Trypanothione reductase 98.3 3.5E-06 1.2E-10 80.7 12.1 99 5-164 188-290 (490)
204 2qae_A Lipoamide, dihydrolipoy 98.3 3.2E-06 1.1E-10 80.5 11.6 98 5-163 175-277 (468)
205 2e1m_A L-glutamate oxidase; L- 98.3 4.6E-07 1.6E-11 82.9 5.5 37 3-39 43-80 (376)
206 1zmd_A Dihydrolipoyl dehydroge 98.3 3E-06 1E-10 80.9 11.3 99 5-163 179-283 (474)
207 2cdu_A NADPH oxidase; flavoenz 98.3 6.4E-06 2.2E-10 78.0 13.4 99 5-163 150-248 (452)
208 1q1r_A Putidaredoxin reductase 98.3 3.7E-06 1.2E-10 79.1 11.4 108 4-171 149-261 (431)
209 1xdi_A RV3303C-LPDA; reductase 98.3 4.4E-06 1.5E-10 80.2 12.2 99 5-164 183-281 (499)
210 3hdq_A UDP-galactopyranose mut 98.3 5.9E-07 2E-11 82.9 5.8 37 3-39 28-64 (397)
211 3ic9_A Dihydrolipoamide dehydr 98.3 5.2E-06 1.8E-10 79.5 12.3 97 5-163 175-275 (492)
212 1ges_A Glutathione reductase; 98.3 4.7E-07 1.6E-11 85.8 4.6 37 1-37 1-37 (450)
213 1onf_A GR, grase, glutathione 98.3 7E-06 2.4E-10 78.8 12.7 99 5-164 177-277 (500)
214 1dxl_A Dihydrolipoamide dehydr 98.3 2.6E-06 8.8E-11 81.2 9.5 98 5-163 178-280 (470)
215 2a8x_A Dihydrolipoyl dehydroge 98.3 4.9E-06 1.7E-10 79.1 11.2 98 5-163 172-272 (464)
216 1d5t_A Guanine nucleotide diss 98.3 1.1E-06 3.6E-11 82.8 6.5 55 109-163 235-291 (433)
217 3urh_A Dihydrolipoyl dehydroge 98.2 7.4E-06 2.5E-10 78.5 12.4 98 5-163 199-301 (491)
218 1zk7_A HGII, reductase, mercur 98.2 7.2E-06 2.5E-10 78.0 12.2 97 5-164 177-273 (467)
219 3s5w_A L-ornithine 5-monooxyge 98.2 4.3E-06 1.5E-10 79.5 10.4 139 4-161 227-376 (463)
220 2wpf_A Trypanothione reductase 98.2 1.4E-05 4.7E-10 76.6 13.6 99 5-164 192-294 (495)
221 2bi7_A UDP-galactopyranose mut 98.2 1.2E-06 4.1E-11 81.1 5.9 36 4-39 3-38 (384)
222 1trb_A Thioredoxin reductase; 98.2 8.8E-06 3E-10 73.2 11.5 94 5-161 146-246 (320)
223 1m6i_A Programmed cell death p 98.2 1.4E-05 4.8E-10 76.5 13.4 99 5-163 181-283 (493)
224 3cgb_A Pyridine nucleotide-dis 98.2 6.7E-06 2.3E-10 78.5 11.0 98 4-163 186-283 (480)
225 3ic9_A Dihydrolipoamide dehydr 98.2 6.9E-07 2.3E-11 85.6 4.1 34 4-37 8-41 (492)
226 2bc0_A NADH oxidase; flavoprot 98.2 1.1E-05 3.7E-10 77.3 12.3 98 4-163 194-292 (490)
227 3lad_A Dihydrolipoamide dehydr 98.2 1.4E-05 4.8E-10 76.2 13.0 98 5-163 181-281 (476)
228 3itj_A Thioredoxin reductase 1 98.2 6.6E-06 2.3E-10 74.5 10.2 91 5-161 174-270 (338)
229 2q0l_A TRXR, thioredoxin reduc 98.2 1.6E-05 5.6E-10 71.1 12.5 91 5-161 144-240 (311)
230 1i8t_A UDP-galactopyranose mut 98.2 1.5E-06 5E-11 80.0 5.2 35 5-39 2-36 (367)
231 1xhc_A NADH oxidase /nitrite r 98.1 6.5E-06 2.2E-10 75.6 9.0 92 5-163 144-235 (367)
232 2wpf_A Trypanothione reductase 98.1 1.4E-06 4.7E-11 83.6 4.5 35 1-35 4-39 (495)
233 4dsg_A UDP-galactopyranose mut 98.1 2.4E-06 8.2E-11 81.6 6.0 57 107-165 215-273 (484)
234 3l8k_A Dihydrolipoyl dehydroge 98.1 2E-05 6.9E-10 74.9 12.2 96 5-163 173-273 (466)
235 1onf_A GR, grase, glutathione 98.1 2.1E-06 7.1E-11 82.5 5.4 34 4-37 2-35 (500)
236 2vdc_G Glutamate synthase [NAD 98.1 2.3E-06 8E-11 80.8 5.3 36 4-39 122-157 (456)
237 3ics_A Coenzyme A-disulfide re 98.1 1.8E-05 6.2E-10 77.6 11.4 96 5-163 188-283 (588)
238 3d1c_A Flavin-containing putat 98.1 1.9E-05 6.5E-10 72.5 10.7 104 5-162 167-272 (369)
239 4b1b_A TRXR, thioredoxin reduc 98.1 6.1E-05 2.1E-09 72.5 14.3 98 5-164 224-321 (542)
240 3dk9_A Grase, GR, glutathione 98.0 3.7E-05 1.3E-09 73.3 12.6 97 5-162 188-293 (478)
241 2q7v_A Thioredoxin reductase; 98.0 3.9E-05 1.3E-09 69.2 11.9 91 5-161 153-248 (325)
242 3r9u_A Thioredoxin reductase; 98.0 4.9E-05 1.7E-09 68.0 12.2 91 5-161 148-243 (315)
243 3dgh_A TRXR-1, thioredoxin red 98.0 4.1E-05 1.4E-09 73.1 12.0 96 5-162 188-289 (483)
244 3ab1_A Ferredoxin--NADP reduct 98.0 1.7E-05 5.7E-10 72.7 8.8 94 5-161 164-262 (360)
245 3kd9_A Coenzyme A disulfide re 98.0 3.4E-05 1.1E-09 73.0 11.1 96 5-162 149-244 (449)
246 2zbw_A Thioredoxin reductase; 98.0 2.9E-05 9.8E-10 70.3 10.1 94 5-161 153-251 (335)
247 1fl2_A Alkyl hydroperoxide red 98.0 4.3E-05 1.5E-09 68.3 11.1 90 5-160 145-240 (310)
248 3f8d_A Thioredoxin reductase ( 98.0 5.8E-05 2E-09 67.7 11.7 91 5-161 155-250 (323)
249 3gwf_A Cyclohexanone monooxyge 98.0 5.7E-05 2E-09 72.9 12.2 53 5-57 179-231 (540)
250 1vdc_A NTR, NADPH dependent th 98.0 4.4E-05 1.5E-09 69.0 10.8 91 5-161 160-258 (333)
251 3cty_A Thioredoxin reductase; 98.0 5.8E-05 2E-09 67.8 11.4 90 5-161 156-251 (319)
252 3dgz_A Thioredoxin reductase 2 98.0 6.4E-05 2.2E-09 71.9 12.3 97 5-163 186-288 (488)
253 1lqt_A FPRA; NADP+ derivative, 97.9 5.2E-06 1.8E-10 78.5 4.6 36 3-38 2-44 (456)
254 2x8g_A Thioredoxin glutathione 97.9 7.6E-06 2.6E-10 80.4 4.9 34 3-36 106-139 (598)
255 1kdg_A CDH, cellobiose dehydro 97.9 8.5E-06 2.9E-10 79.1 5.1 36 3-38 6-41 (546)
256 1o94_A Tmadh, trimethylamine d 97.9 9.5E-06 3.2E-10 81.5 5.3 35 4-38 389-423 (729)
257 3t37_A Probable dehydrogenase; 97.9 8.4E-06 2.9E-10 78.8 4.4 36 3-38 16-52 (526)
258 3uox_A Otemo; baeyer-villiger 97.9 6.3E-05 2.2E-09 72.7 10.5 34 5-38 186-219 (545)
259 4eqs_A Coenzyme A disulfide re 97.9 0.00013 4.4E-09 68.6 12.4 93 5-162 148-240 (437)
260 1ps9_A 2,4-dienoyl-COA reducta 97.8 1.4E-05 4.9E-10 79.5 5.4 36 4-39 373-408 (671)
261 2a87_A TRXR, TR, thioredoxin r 97.8 6.8E-05 2.3E-09 67.9 9.5 90 5-160 156-250 (335)
262 1ju2_A HydroxynitrIle lyase; f 97.8 7.1E-06 2.4E-10 79.3 2.9 35 4-39 26-60 (536)
263 2xag_A Lysine-specific histone 97.8 2E-05 6.9E-10 79.7 5.8 36 4-39 278-313 (852)
264 3lzw_A Ferredoxin--NADP reduct 97.8 7.2E-05 2.5E-09 67.4 8.7 90 5-161 155-249 (332)
265 3qfa_A Thioredoxin reductase 1 97.7 0.0003 1E-08 67.7 13.0 96 5-162 211-315 (519)
266 1cjc_A Protein (adrenodoxin re 97.7 2.4E-05 8.1E-10 74.1 5.1 37 3-39 5-43 (460)
267 1gte_A Dihydropyrimidine dehyd 97.7 2.6E-05 8.9E-10 81.2 5.6 35 4-38 187-222 (1025)
268 3fbs_A Oxidoreductase; structu 97.7 0.00011 3.6E-09 65.1 8.8 84 5-161 142-225 (297)
269 1coy_A Cholesterol oxidase; ox 97.7 3.1E-05 1.1E-09 74.3 5.1 36 2-37 9-44 (507)
270 3q9t_A Choline dehydrogenase a 97.7 2.4E-05 8.1E-10 76.0 4.1 36 3-38 5-41 (577)
271 1n4w_A CHOD, cholesterol oxida 97.6 3.8E-05 1.3E-09 73.7 5.0 35 3-37 4-38 (504)
272 1vg0_A RAB proteins geranylger 97.6 6.4E-05 2.2E-09 73.2 6.1 41 2-42 6-46 (650)
273 2gv8_A Monooxygenase; FMO, FAD 97.6 0.00014 4.9E-09 68.6 8.3 34 5-38 213-247 (447)
274 2xve_A Flavin-containing monoo 97.6 0.00025 8.5E-09 67.2 9.8 34 5-38 198-231 (464)
275 3qvp_A Glucose oxidase; oxidor 97.6 3.6E-05 1.2E-09 74.7 4.0 35 3-37 18-53 (583)
276 4ap3_A Steroid monooxygenase; 97.6 6.5E-05 2.2E-09 72.7 5.6 34 5-38 192-225 (549)
277 1gpe_A Protein (glucose oxidas 97.6 5.7E-05 1.9E-09 73.8 5.0 37 3-39 23-60 (587)
278 3ayj_A Pro-enzyme of L-phenyla 97.5 3.6E-05 1.2E-09 75.9 3.5 36 4-39 56-100 (721)
279 3fim_B ARYL-alcohol oxidase; A 97.5 3E-05 1E-09 75.1 2.9 35 4-38 2-37 (566)
280 1hyu_A AHPF, alkyl hydroperoxi 97.5 0.00057 2E-08 65.8 11.8 90 5-160 356-451 (521)
281 2x8g_A Thioredoxin glutathione 97.5 0.001 3.5E-08 65.2 13.7 32 5-36 287-318 (598)
282 2jbv_A Choline oxidase; alcoho 97.5 6.3E-05 2.1E-09 72.8 4.3 37 3-39 12-49 (546)
283 4g6h_A Rotenone-insensitive NA 97.5 0.00048 1.7E-08 65.8 10.4 51 109-161 277-331 (502)
284 1o94_A Tmadh, trimethylamine d 97.1 0.00085 2.9E-08 67.3 7.5 33 5-37 529-563 (729)
285 2gag_A Heterotetrameric sarcos 97.1 0.0016 5.4E-08 67.4 9.6 88 5-162 285-383 (965)
286 3klj_A NAD(FAD)-dependent dehy 97.0 0.0007 2.4E-08 62.4 5.6 36 5-40 147-182 (385)
287 2g1u_A Hypothetical protein TM 96.9 0.0011 3.7E-08 52.4 5.3 35 4-38 19-53 (155)
288 1ps9_A 2,4-dienoyl-COA reducta 96.9 0.0037 1.3E-07 62.1 10.2 48 109-161 578-627 (671)
289 1id1_A Putative potassium chan 96.9 0.0013 4.4E-08 51.9 5.6 34 4-37 3-36 (153)
290 4a9w_A Monooxygenase; baeyer-v 96.9 0.00092 3.2E-08 60.7 5.0 32 5-37 164-195 (357)
291 3llv_A Exopolyphosphatase-rela 96.9 0.0011 3.8E-08 51.4 4.7 33 5-37 7-39 (141)
292 1cjc_A Protein (adrenodoxin re 96.8 0.0061 2.1E-07 57.5 10.6 34 5-38 146-200 (460)
293 1lss_A TRK system potassium up 96.8 0.0013 4.5E-08 50.7 5.0 34 4-37 4-37 (140)
294 1w4x_A Phenylacetone monooxyge 96.8 0.0054 1.9E-07 59.3 10.1 35 5-39 187-221 (542)
295 3fwz_A Inner membrane protein 96.8 0.0015 5.1E-08 50.6 5.0 34 5-38 8-41 (140)
296 4e12_A Diketoreductase; oxidor 96.7 0.0016 5.6E-08 57.2 5.4 38 1-38 1-38 (283)
297 1gte_A Dihydropyrimidine dehyd 96.7 0.0096 3.3E-07 62.1 11.8 32 6-37 334-366 (1025)
298 1lqt_A FPRA; NADP+ derivative, 96.7 0.0044 1.5E-07 58.4 8.2 34 5-38 148-202 (456)
299 3ic5_A Putative saccharopine d 96.6 0.0021 7.1E-08 47.9 4.7 33 5-37 6-39 (118)
300 2vdc_G Glutamate synthase [NAD 96.5 0.004 1.4E-07 58.6 7.0 35 5-39 265-300 (456)
301 1bg6_A N-(1-D-carboxylethyl)-L 96.4 0.0027 9.3E-08 57.8 4.9 37 1-37 1-37 (359)
302 2ewd_A Lactate dehydrogenase,; 96.4 0.0033 1.1E-07 56.2 5.2 38 1-38 1-39 (317)
303 4gcm_A TRXR, thioredoxin reduc 96.3 0.0031 1E-07 56.2 4.6 35 5-39 146-180 (312)
304 4b63_A L-ornithine N5 monooxyg 96.3 0.017 5.8E-07 55.1 9.7 34 5-38 247-282 (501)
305 3c85_A Putative glutathione-re 96.2 0.0052 1.8E-07 50.0 5.2 34 5-38 40-74 (183)
306 2hmt_A YUAA protein; RCK, KTN, 96.2 0.0052 1.8E-07 47.5 5.0 33 5-37 7-39 (144)
307 3h8l_A NADH oxidase; membrane 96.2 0.0092 3.1E-07 55.4 7.4 38 120-161 232-269 (409)
308 3l4b_C TRKA K+ channel protien 96.2 0.0037 1.3E-07 52.5 4.0 33 6-38 2-34 (218)
309 1t2d_A LDH-P, L-lactate dehydr 96.1 0.0061 2.1E-07 54.4 5.5 38 1-38 1-39 (322)
310 3i83_A 2-dehydropantoate 2-red 96.1 0.0055 1.9E-07 54.8 5.0 33 5-37 3-35 (320)
311 3qha_A Putative oxidoreductase 96.1 0.0042 1.4E-07 54.9 4.2 36 3-38 14-49 (296)
312 3ado_A Lambda-crystallin; L-gu 96.1 0.0046 1.6E-07 54.8 4.4 34 5-38 7-40 (319)
313 3h28_A Sulfide-quinone reducta 96.0 0.013 4.4E-07 54.8 7.5 50 108-161 204-255 (430)
314 3ghy_A Ketopantoate reductase 96.0 0.0071 2.4E-07 54.5 5.1 33 4-36 3-35 (335)
315 4a5l_A Thioredoxin reductase; 96.0 0.0067 2.3E-07 53.9 4.9 34 5-38 153-186 (314)
316 4e21_A 6-phosphogluconate dehy 95.9 0.0068 2.3E-07 54.9 4.9 38 1-38 19-56 (358)
317 1f0y_A HCDH, L-3-hydroxyacyl-C 95.9 0.0081 2.8E-07 53.2 5.2 34 5-38 16-49 (302)
318 3hn2_A 2-dehydropantoate 2-red 95.9 0.0068 2.3E-07 54.0 4.7 33 5-37 3-35 (312)
319 2dpo_A L-gulonate 3-dehydrogen 95.8 0.0074 2.5E-07 53.8 4.5 34 5-38 7-40 (319)
320 3g17_A Similar to 2-dehydropan 95.7 0.0088 3E-07 52.7 4.7 33 5-37 3-35 (294)
321 3tl2_A Malate dehydrogenase; c 95.7 0.011 3.7E-07 52.5 5.1 34 4-37 8-42 (315)
322 3sx6_A Sulfide-quinone reducta 95.7 0.035 1.2E-06 51.9 9.0 48 109-160 213-267 (437)
323 2ew2_A 2-dehydropantoate 2-red 95.7 0.0094 3.2E-07 53.1 4.8 33 5-37 4-36 (316)
324 2x5o_A UDP-N-acetylmuramoylala 95.7 0.0082 2.8E-07 56.3 4.5 36 4-39 5-40 (439)
325 2raf_A Putative dinucleotide-b 95.7 0.012 4.2E-07 48.9 5.0 35 4-38 19-53 (209)
326 3dfz_A SIRC, precorrin-2 dehyd 95.6 0.012 4.2E-07 49.1 4.8 33 4-36 31-63 (223)
327 3lk7_A UDP-N-acetylmuramoylala 95.6 0.012 4.1E-07 55.3 5.3 33 5-37 10-42 (451)
328 4g65_A TRK system potassium up 95.6 0.0043 1.5E-07 58.4 2.2 35 4-38 3-37 (461)
329 1ks9_A KPA reductase;, 2-dehyd 95.6 0.012 4.1E-07 51.6 5.0 33 6-38 2-34 (291)
330 3cky_A 2-hydroxymethyl glutara 95.5 0.011 3.9E-07 52.2 4.7 37 1-37 1-37 (301)
331 1pzg_A LDH, lactate dehydrogen 95.5 0.015 5.1E-07 52.2 5.4 34 5-38 10-44 (331)
332 3g79_A NDP-N-acetyl-D-galactos 95.5 0.011 3.6E-07 55.7 4.6 36 3-38 17-54 (478)
333 4dio_A NAD(P) transhydrogenase 95.4 0.015 5.3E-07 53.0 5.2 35 4-38 190-224 (405)
334 4huj_A Uncharacterized protein 95.4 0.007 2.4E-07 50.9 2.8 35 4-38 23-58 (220)
335 2izz_A Pyrroline-5-carboxylate 95.4 0.014 4.8E-07 52.2 4.9 38 1-38 19-60 (322)
336 3doj_A AT3G25530, dehydrogenas 95.4 0.017 5.8E-07 51.3 5.3 34 5-38 22-55 (310)
337 1kyq_A Met8P, siroheme biosynt 95.4 0.0085 2.9E-07 51.8 3.2 34 4-37 13-46 (274)
338 3gg2_A Sugar dehydrogenase, UD 95.4 0.014 4.9E-07 54.6 5.0 34 5-38 3-36 (450)
339 2hjr_A Malate dehydrogenase; m 95.4 0.018 6E-07 51.6 5.3 34 5-38 15-49 (328)
340 1y56_A Hypothetical protein PH 95.4 0.041 1.4E-06 52.3 8.2 44 120-163 271-314 (493)
341 1lld_A L-lactate dehydrogenase 95.4 0.016 5.3E-07 51.8 5.0 33 5-37 8-42 (319)
342 3k96_A Glycerol-3-phosphate de 95.3 0.016 5.6E-07 52.4 5.0 35 4-38 29-63 (356)
343 2uyy_A N-PAC protein; long-cha 95.3 0.019 6.7E-07 51.1 5.5 35 4-38 30-64 (316)
344 3gvi_A Malate dehydrogenase; N 95.3 0.019 6.6E-07 51.1 5.2 35 4-38 7-42 (324)
345 3p2y_A Alanine dehydrogenase/p 95.2 0.017 5.9E-07 52.2 4.8 35 4-38 184-218 (381)
346 1zej_A HBD-9, 3-hydroxyacyl-CO 95.2 0.016 5.3E-07 50.9 4.3 34 4-38 12-45 (293)
347 2y0c_A BCEC, UDP-glucose dehyd 95.2 0.018 6E-07 54.5 4.9 35 4-38 8-42 (478)
348 3mog_A Probable 3-hydroxybutyr 95.2 0.02 6.8E-07 54.1 5.2 35 4-38 5-39 (483)
349 2xag_A Lysine-specific histone 95.2 0.65 2.2E-05 47.1 16.4 55 108-166 572-632 (852)
350 3dtt_A NADP oxidoreductase; st 95.2 0.022 7.6E-07 48.6 5.1 35 4-38 19-53 (245)
351 3ego_A Probable 2-dehydropanto 95.1 0.019 6.5E-07 50.9 4.7 32 5-37 3-34 (307)
352 3p7m_A Malate dehydrogenase; p 95.1 0.024 8.3E-07 50.4 5.4 35 4-38 5-40 (321)
353 3l6d_A Putative oxidoreductase 95.1 0.026 8.9E-07 50.0 5.5 35 4-38 9-43 (306)
354 2rcy_A Pyrroline carboxylate r 95.1 0.043 1.5E-06 47.3 6.7 35 4-38 4-42 (262)
355 2v6b_A L-LDH, L-lactate dehydr 95.0 0.023 7.8E-07 50.3 4.9 32 6-37 2-35 (304)
356 3l9w_A Glutathione-regulated p 95.0 0.02 7E-07 52.9 4.7 35 4-38 4-38 (413)
357 1jw9_B Molybdopterin biosynthe 95.0 0.021 7.2E-07 48.9 4.5 34 5-38 32-66 (249)
358 1z82_A Glycerol-3-phosphate de 95.0 0.023 7.8E-07 51.1 5.0 34 4-37 14-47 (335)
359 2q3e_A UDP-glucose 6-dehydroge 95.0 0.02 6.9E-07 54.0 4.7 38 1-38 2-41 (467)
360 3k6j_A Protein F01G10.3, confi 95.0 0.021 7.1E-07 53.3 4.7 34 5-38 55-88 (460)
361 1evy_A Glycerol-3-phosphate de 95.0 0.012 4.1E-07 53.7 3.1 32 6-37 17-48 (366)
362 3d0o_A L-LDH 1, L-lactate dehy 95.0 0.024 8.1E-07 50.5 4.9 36 2-37 4-41 (317)
363 1y6j_A L-lactate dehydrogenase 95.0 0.025 8.5E-07 50.4 5.0 34 4-37 7-42 (318)
364 3oj0_A Glutr, glutamyl-tRNA re 94.9 0.0089 3E-07 46.4 1.8 34 5-38 22-55 (144)
365 3g0o_A 3-hydroxyisobutyrate de 94.9 0.025 8.6E-07 50.0 4.9 35 4-38 7-41 (303)
366 3pef_A 6-phosphogluconate dehy 94.9 0.025 8.7E-07 49.6 4.9 34 5-38 2-35 (287)
367 1zcj_A Peroxisomal bifunctiona 94.9 0.025 8.5E-07 53.3 5.0 34 5-38 38-71 (463)
368 3pqe_A L-LDH, L-lactate dehydr 94.9 0.028 9.5E-07 50.1 5.1 34 4-37 5-40 (326)
369 3eag_A UDP-N-acetylmuramate:L- 94.9 0.03 1E-06 50.1 5.4 34 5-38 5-39 (326)
370 3tri_A Pyrroline-5-carboxylate 94.9 0.032 1.1E-06 48.7 5.4 35 4-38 3-40 (280)
371 3pdu_A 3-hydroxyisobutyrate de 94.8 0.025 8.6E-07 49.6 4.6 33 6-38 3-35 (287)
372 2zyd_A 6-phosphogluconate dehy 94.8 0.025 8.6E-07 53.5 4.8 37 2-38 13-49 (480)
373 2vns_A Metalloreductase steap3 94.8 0.035 1.2E-06 46.4 5.1 34 5-38 29-62 (215)
374 4ezb_A Uncharacterized conserv 94.8 0.02 6.8E-07 51.0 3.9 34 5-38 25-59 (317)
375 3hwr_A 2-dehydropantoate 2-red 94.7 0.029 1E-06 50.0 4.8 33 4-37 19-51 (318)
376 1ur5_A Malate dehydrogenase; o 94.7 0.033 1.1E-06 49.4 5.1 33 5-37 3-36 (309)
377 4a7p_A UDP-glucose dehydrogena 94.7 0.033 1.1E-06 52.0 5.2 34 5-38 9-42 (446)
378 3pid_A UDP-glucose 6-dehydroge 94.7 0.024 8.2E-07 52.5 4.1 33 5-38 37-69 (432)
379 4dll_A 2-hydroxy-3-oxopropiona 94.6 0.034 1.1E-06 49.6 4.9 34 5-38 32-65 (320)
380 4dna_A Probable glutathione re 94.6 0.044 1.5E-06 51.7 6.0 35 5-39 171-205 (463)
381 1ez4_A Lactate dehydrogenase; 94.6 0.033 1.1E-06 49.5 4.8 37 1-37 2-40 (318)
382 2a9f_A Putative malic enzyme ( 94.6 0.035 1.2E-06 50.2 4.9 34 4-37 188-222 (398)
383 4fk1_A Putative thioredoxin re 94.6 0.16 5.6E-06 44.6 9.3 33 5-37 147-180 (304)
384 1guz_A Malate dehydrogenase; o 94.6 0.038 1.3E-06 49.0 5.1 33 6-38 2-36 (310)
385 3ggo_A Prephenate dehydrogenas 94.5 0.04 1.4E-06 48.9 5.3 34 5-38 34-69 (314)
386 1mv8_A GMD, GDP-mannose 6-dehy 94.5 0.03 1E-06 52.4 4.5 33 6-38 2-34 (436)
387 1x13_A NAD(P) transhydrogenase 94.5 0.032 1.1E-06 51.4 4.7 35 4-38 172-206 (401)
388 2qyt_A 2-dehydropantoate 2-red 94.5 0.026 9E-07 50.2 4.0 31 5-35 9-45 (317)
389 3gpi_A NAD-dependent epimerase 94.5 0.047 1.6E-06 47.7 5.6 34 5-38 4-37 (286)
390 3qsg_A NAD-binding phosphogluc 94.5 0.034 1.2E-06 49.4 4.6 33 5-37 25-58 (312)
391 1txg_A Glycerol-3-phosphate de 94.5 0.032 1.1E-06 50.0 4.5 30 6-35 2-31 (335)
392 4gwg_A 6-phosphogluconate dehy 94.4 0.042 1.4E-06 51.8 5.3 36 3-38 3-38 (484)
393 3dhn_A NAD-dependent epimerase 94.4 0.031 1.1E-06 46.9 4.0 38 1-38 1-39 (227)
394 2h78_A Hibadh, 3-hydroxyisobut 94.3 0.038 1.3E-06 48.8 4.7 34 5-38 4-37 (302)
395 1l7d_A Nicotinamide nucleotide 94.3 0.04 1.4E-06 50.5 4.9 35 4-38 172-206 (384)
396 1x0v_A GPD-C, GPDH-C, glycerol 94.3 0.024 8.3E-07 51.3 3.4 35 4-38 8-49 (354)
397 2iz1_A 6-phosphogluconate dehy 94.3 0.045 1.5E-06 51.7 5.3 35 4-38 5-39 (474)
398 3o0h_A Glutathione reductase; 94.3 0.053 1.8E-06 51.4 5.8 35 5-39 192-226 (484)
399 1pjc_A Protein (L-alanine dehy 94.3 0.042 1.4E-06 49.9 4.9 33 5-37 168-200 (361)
400 1oju_A MDH, malate dehydrogena 94.3 0.041 1.4E-06 48.3 4.6 33 6-38 2-36 (294)
401 3k5i_A Phosphoribosyl-aminoimi 94.2 0.048 1.6E-06 50.4 5.2 36 1-37 21-56 (403)
402 2p4q_A 6-phosphogluconate dehy 94.2 0.049 1.7E-06 51.7 5.4 35 4-38 10-44 (497)
403 3gt0_A Pyrroline-5-carboxylate 94.2 0.055 1.9E-06 46.2 5.3 34 5-38 3-40 (247)
404 1a5z_A L-lactate dehydrogenase 94.2 0.041 1.4E-06 49.0 4.6 32 6-37 2-35 (319)
405 3dfu_A Uncharacterized protein 94.2 0.014 5E-07 49.0 1.4 32 4-35 6-37 (232)
406 1vpd_A Tartronate semialdehyde 94.2 0.042 1.4E-06 48.4 4.5 34 5-38 6-39 (299)
407 1yj8_A Glycerol-3-phosphate de 94.2 0.038 1.3E-06 50.6 4.4 34 5-38 22-62 (375)
408 2f1k_A Prephenate dehydrogenas 94.1 0.048 1.6E-06 47.5 4.8 32 6-37 2-33 (279)
409 1vl6_A Malate oxidoreductase; 94.1 0.053 1.8E-06 49.0 5.0 34 3-36 191-225 (388)
410 3ius_A Uncharacterized conserv 94.1 0.045 1.5E-06 47.8 4.6 34 5-38 6-39 (286)
411 3c24_A Putative oxidoreductase 94.1 0.054 1.9E-06 47.4 5.1 33 5-37 12-45 (286)
412 1jay_A Coenzyme F420H2:NADP+ o 94.1 0.051 1.7E-06 45.1 4.7 32 6-37 2-34 (212)
413 2aef_A Calcium-gated potassium 94.0 0.02 6.9E-07 48.5 2.1 34 4-38 9-42 (234)
414 1yqg_A Pyrroline-5-carboxylate 93.9 0.052 1.8E-06 46.8 4.6 32 6-37 2-34 (263)
415 3nep_X Malate dehydrogenase; h 93.9 0.054 1.9E-06 47.9 4.7 33 6-38 2-36 (314)
416 2pv7_A T-protein [includes: ch 93.9 0.056 1.9E-06 47.7 4.8 34 5-38 22-56 (298)
417 1hdo_A Biliverdin IX beta redu 93.9 0.076 2.6E-06 43.5 5.4 34 5-38 4-38 (206)
418 1ldn_A L-lactate dehydrogenase 93.9 0.063 2.1E-06 47.7 5.1 34 4-37 6-41 (316)
419 3h8v_A Ubiquitin-like modifier 93.9 0.055 1.9E-06 47.2 4.5 35 4-38 36-71 (292)
420 2eez_A Alanine dehydrogenase; 93.9 0.063 2.2E-06 48.9 5.2 33 5-37 167-199 (369)
421 3d1l_A Putative NADP oxidoredu 93.9 0.059 2E-06 46.6 4.8 33 5-37 11-44 (266)
422 2gf2_A Hibadh, 3-hydroxyisobut 93.9 0.058 2E-06 47.4 4.8 33 6-38 2-34 (296)
423 3ktd_A Prephenate dehydrogenas 93.8 0.062 2.1E-06 48.2 5.0 33 5-37 9-41 (341)
424 3vku_A L-LDH, L-lactate dehydr 93.8 0.063 2.2E-06 47.7 4.9 34 4-37 9-44 (326)
425 2pgd_A 6-phosphogluconate dehy 93.8 0.064 2.2E-06 50.8 5.2 34 5-38 3-36 (482)
426 3ldh_A Lactate dehydrogenase; 93.7 0.069 2.4E-06 47.5 5.0 34 4-37 21-56 (330)
427 1y7t_A Malate dehydrogenase; N 93.7 0.045 1.5E-06 49.0 3.8 37 1-37 1-45 (327)
428 3vtf_A UDP-glucose 6-dehydroge 93.7 0.065 2.2E-06 49.7 4.9 34 5-38 22-55 (444)
429 3rui_A Ubiquitin-like modifier 93.7 0.071 2.4E-06 47.5 4.9 35 4-38 34-69 (340)
430 1hyh_A L-hicdh, L-2-hydroxyiso 93.7 0.06 2E-06 47.7 4.5 32 6-37 3-36 (309)
431 2cvz_A Dehydrogenase, 3-hydrox 93.7 0.058 2E-06 47.2 4.4 32 6-38 3-34 (289)
432 2i6t_A Ubiquitin-conjugating e 93.6 0.064 2.2E-06 47.3 4.6 34 5-38 15-50 (303)
433 2o3j_A UDP-glucose 6-dehydroge 93.6 0.057 2E-06 51.1 4.6 34 5-38 10-45 (481)
434 2vhw_A Alanine dehydrogenase; 93.6 0.076 2.6E-06 48.5 5.2 34 4-37 168-201 (377)
435 1dlj_A UDP-glucose dehydrogena 93.6 0.048 1.6E-06 50.3 3.9 32 6-38 2-33 (402)
436 1nyt_A Shikimate 5-dehydrogena 93.5 0.084 2.9E-06 45.8 5.2 33 5-37 120-152 (271)
437 4gbj_A 6-phosphogluconate dehy 93.5 0.055 1.9E-06 47.6 4.0 34 5-38 6-39 (297)
438 2g5c_A Prephenate dehydrogenas 93.5 0.076 2.6E-06 46.3 4.9 32 6-37 3-36 (281)
439 4ffl_A PYLC; amino acid, biosy 93.4 0.085 2.9E-06 47.9 5.3 34 5-38 2-35 (363)
440 1zud_1 Adenylyltransferase THI 93.4 0.076 2.6E-06 45.4 4.6 35 4-38 28-63 (251)
441 3phh_A Shikimate dehydrogenase 93.4 0.097 3.3E-06 45.1 5.2 34 5-38 119-152 (269)
442 4aj2_A L-lactate dehydrogenase 93.3 0.094 3.2E-06 46.7 5.2 33 4-36 19-53 (331)
443 3k30_A Histamine dehydrogenase 93.3 0.1 3.5E-06 51.9 6.1 35 5-39 524-560 (690)
444 3ew7_A LMO0794 protein; Q8Y8U8 93.3 0.097 3.3E-06 43.5 5.1 33 6-38 2-35 (221)
445 1pjq_A CYSG, siroheme synthase 93.3 0.076 2.6E-06 49.8 4.9 34 4-37 12-45 (457)
446 3ond_A Adenosylhomocysteinase; 93.3 0.08 2.7E-06 49.5 4.9 34 4-37 265-298 (488)
447 3fi9_A Malate dehydrogenase; s 93.3 0.096 3.3E-06 46.9 5.3 35 3-37 7-44 (343)
448 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.3 0.08 2.7E-06 50.0 5.0 33 5-37 2-34 (478)
449 3c7a_A Octopine dehydrogenase; 93.2 0.046 1.6E-06 50.5 3.2 31 5-35 3-34 (404)
450 3e8x_A Putative NAD-dependent 93.2 0.1 3.5E-06 44.0 5.0 35 4-38 21-56 (236)
451 3orq_A N5-carboxyaminoimidazol 93.1 0.11 3.8E-06 47.4 5.6 35 4-38 12-46 (377)
452 3q2o_A Phosphoribosylaminoimid 93.1 0.11 3.8E-06 47.6 5.6 35 4-38 14-48 (389)
453 1np3_A Ketol-acid reductoisome 93.1 0.1 3.4E-06 46.9 5.1 34 5-38 17-50 (338)
454 2egg_A AROE, shikimate 5-dehyd 93.0 0.094 3.2E-06 46.1 4.7 33 5-37 142-175 (297)
455 2wtb_A MFP2, fatty acid multif 93.0 0.077 2.6E-06 52.9 4.6 34 5-38 313-346 (725)
456 3b1f_A Putative prephenate deh 93.0 0.088 3E-06 46.1 4.6 33 5-37 7-41 (290)
457 4b4o_A Epimerase family protei 93.0 0.11 3.9E-06 45.5 5.3 33 6-38 2-35 (298)
458 3enk_A UDP-glucose 4-epimerase 93.0 0.13 4.3E-06 46.1 5.6 38 1-38 2-40 (341)
459 3h2s_A Putative NADH-flavin re 92.9 0.11 3.8E-06 43.2 5.0 32 6-37 2-34 (224)
460 3d4o_A Dipicolinate synthase s 92.9 0.12 4E-06 45.4 5.2 34 4-37 155-188 (293)
461 3vps_A TUNA, NAD-dependent epi 92.9 0.11 3.7E-06 46.0 5.1 35 4-38 7-42 (321)
462 2rir_A Dipicolinate synthase, 92.9 0.12 4E-06 45.6 5.2 34 4-37 157-190 (300)
463 3gvp_A Adenosylhomocysteinase 92.9 0.1 3.6E-06 47.8 4.9 34 4-37 220-253 (435)
464 3h5n_A MCCB protein; ubiquitin 92.9 0.1 3.4E-06 47.2 4.8 35 4-38 118-153 (353)
465 2hk9_A Shikimate dehydrogenase 92.9 0.099 3.4E-06 45.4 4.6 33 5-37 130-162 (275)
466 2ahr_A Putative pyrroline carb 92.8 0.084 2.9E-06 45.3 4.1 33 5-37 4-36 (259)
467 3ce6_A Adenosylhomocysteinase; 92.7 0.11 3.7E-06 49.0 4.9 35 4-38 274-308 (494)
468 1i36_A Conserved hypothetical 92.7 0.091 3.1E-06 45.2 4.1 30 6-35 2-31 (264)
469 1p77_A Shikimate 5-dehydrogena 92.6 0.099 3.4E-06 45.3 4.2 33 5-37 120-152 (272)
470 3don_A Shikimate dehydrogenase 92.6 0.11 3.7E-06 45.1 4.4 34 5-38 118-152 (277)
471 1yb4_A Tartronic semialdehyde 92.5 0.078 2.7E-06 46.5 3.5 33 5-38 4-36 (295)
472 2zqz_A L-LDH, L-lactate dehydr 92.5 0.13 4.4E-06 45.8 4.9 34 4-37 9-44 (326)
473 4gx0_A TRKA domain protein; me 92.5 0.13 4.4E-06 49.9 5.3 35 5-39 349-383 (565)
474 1wdk_A Fatty oxidation complex 92.5 0.094 3.2E-06 52.2 4.3 34 5-38 315-348 (715)
475 1b8p_A Protein (malate dehydro 92.5 0.085 2.9E-06 47.2 3.7 33 4-36 5-45 (329)
476 3u62_A Shikimate dehydrogenase 92.4 0.15 5E-06 43.6 5.0 33 6-38 110-143 (253)
477 2d4a_B Malate dehydrogenase; a 92.4 0.13 4.3E-06 45.5 4.8 32 6-37 1-33 (308)
478 2we8_A Xanthine dehydrogenase; 92.4 0.15 5E-06 46.5 5.2 36 3-38 203-238 (386)
479 1qyc_A Phenylcoumaran benzylic 92.3 0.15 5.2E-06 44.8 5.2 38 1-38 1-39 (308)
480 4e4t_A Phosphoribosylaminoimid 92.2 0.17 5.7E-06 47.0 5.5 34 4-37 35-68 (419)
481 2d5c_A AROE, shikimate 5-dehyd 92.1 0.16 5.4E-06 43.8 4.9 32 6-37 118-149 (263)
482 1qyd_A Pinoresinol-lariciresin 92.1 0.16 5.5E-06 44.8 5.1 38 1-38 1-39 (313)
483 4gsl_A Ubiquitin-like modifier 92.1 0.15 5.1E-06 49.0 4.9 35 4-38 326-361 (615)
484 2yjz_A Metalloreductase steap4 91.3 0.028 9.6E-07 46.3 0.0 35 4-38 19-53 (201)
485 3tnl_A Shikimate dehydrogenase 91.9 0.19 6.4E-06 44.4 5.2 34 4-37 154-188 (315)
486 3jyo_A Quinate/shikimate dehyd 91.9 0.19 6.4E-06 43.8 5.1 34 4-37 127-161 (283)
487 2x0j_A Malate dehydrogenase; o 91.9 0.16 5.3E-06 44.5 4.6 32 6-37 2-35 (294)
488 1y8q_A Ubiquitin-like 1 activa 91.8 0.16 5.4E-06 45.7 4.7 35 4-38 36-71 (346)
489 1mld_A Malate dehydrogenase; o 91.8 0.15 5.2E-06 45.2 4.5 32 6-37 2-36 (314)
490 1d5t_A Guanine nucleotide diss 91.7 0.19 6.3E-06 46.9 5.3 39 1-39 3-41 (433)
491 3on5_A BH1974 protein; structu 91.7 0.12 4.2E-06 46.3 3.8 35 4-38 199-233 (362)
492 2wm3_A NMRA-like family domain 91.7 0.18 6.3E-06 44.1 5.0 38 1-38 2-41 (299)
493 3ojo_A CAP5O; rossmann fold, c 91.7 0.13 4.3E-06 47.7 4.0 34 5-38 12-45 (431)
494 1gpj_A Glutamyl-tRNA reductase 91.7 0.15 5.3E-06 46.9 4.6 34 4-37 167-201 (404)
495 3zwc_A Peroxisomal bifunctiona 91.7 0.12 4.1E-06 51.4 4.0 34 5-38 317-350 (742)
496 1smk_A Malate dehydrogenase, g 91.7 0.14 4.9E-06 45.6 4.2 35 4-38 8-45 (326)
497 3fbt_A Chorismate mutase and s 91.6 0.2 6.7E-06 43.5 4.9 34 4-37 122-156 (282)
498 3vh1_A Ubiquitin-like modifier 91.5 0.16 5.6E-06 48.6 4.6 35 4-38 327-362 (598)
499 3h9u_A Adenosylhomocysteinase; 91.4 0.2 6.8E-06 46.1 4.9 34 4-37 211-244 (436)
500 3pwz_A Shikimate dehydrogenase 91.4 0.23 7.8E-06 42.9 5.1 34 4-37 120-154 (272)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=2.6e-50 Score=380.68 Aligned_cols=366 Identities=23% Similarity=0.372 Sum_probs=296.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+|+++|+.|+++|++|+|+||.+.+...++++.+++.+.+.|+++|+++.+...+.+.....+++...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 46899999999999999999999999999999999888888999999999999999999999998888888887777654
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
+.....++............+.++|..|.+.|.+.+..++|+++++|++++.++++++|++.+|++++||+||+|||.+|
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcCh
Confidence 55444444332211112445689999999999998866899999999999999999999999999999999999999999
Q ss_pred HHHhhh-CCC-CCcccceeeEEEeecCCCCCCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCcccccChHHHH
Q 015303 163 IVAKWL-GFK-NPAFVGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELK 240 (409)
Q Consensus 163 ~vr~~l-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (409)
.+|+.+ +.. .+.+.+..++.+.+..+........+..+++++.+++++|.++++.+|++....+.. ...+++...
T Consensus 182 ~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~ 258 (407)
T 3rp8_A 182 ALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAG---LAEDRDTLR 258 (407)
T ss_dssp SSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---CSCCTTTHH
T ss_pred HHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcC---CCCCchhHH
Confidence 999998 765 444566677777766554444345567777888899999999999888887764432 233455667
Q ss_pred HHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhHHHHHHHH
Q 015303 241 QFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARC 320 (409)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la~~ 320 (409)
+.+.+.+..+.+.+..+++.........+......+. ++|..+||+|||||||.++|++|||+|+||+||..|++.
T Consensus 259 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~ 334 (407)
T 3rp8_A 259 ADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPF----SRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAV 334 (407)
T ss_dssp HHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCC----SCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCC----CceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHH
Confidence 8899999999999988887765444322322222222 477889999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCchhHHHHHHHHHHHHh
Q 015303 321 INEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILASFL 391 (409)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~ 391 (409)
|.+.. ....+|+.|+++|++++..++..+..+..+++..++...++|+.+++...
T Consensus 335 L~~~~----------------~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~R~~~l~~~~ 389 (407)
T 3rp8_A 335 FRQTR----------------DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDMQLTEAWYQELREET 389 (407)
T ss_dssp HHSCC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHSCC
T ss_pred HhcCC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCHHHHHHHHHHHhhcc
Confidence 98521 45789999999999999999999999999999999999999999988543
No 2
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=7.2e-43 Score=336.18 Aligned_cols=349 Identities=19% Similarity=0.156 Sum_probs=252.1
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++++||+||||||+|+++|+.|+++|++|+|+||.+.+...+++..+++.++++|+++|+++++... .......+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~---- 83 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHF---- 83 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEE----
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-cccccccc----
Confidence 4578999999999999999999999999999999998888889999999999999999999888654 22221111
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCc---EEeccEEEe
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGT---ILKTKVLIG 156 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~---~~~ad~vV~ 156 (409)
.+. .+++..... .......+++..+.+.|.+.+ .+++|+++++|++++++++++++++.++. +++||+||+
T Consensus 84 ~~~---~~~~~~~~~-~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVg 159 (500)
T 2qa1_A 84 GGL---PIDFGVLEG-AWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVG 159 (500)
T ss_dssp TTE---EEEGGGSTT-GGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEE
T ss_pred cce---ecccccCCC-CCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEE
Confidence 111 122211111 112346789999999998866 36899999999999999999999988775 799999999
Q ss_pred cCCCchHHHhhhCCCCCcc-cceeeEEEeecCCCCCCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCC-cCccccc
Q 015303 157 CDGVNSIVAKWLGFKNPAF-VGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSS-QDKELED 234 (409)
Q Consensus 157 AdG~~S~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~ 234 (409)
|||.+|.+|+.++...+.. .....+.+.+..... +..+..++.++++++++|.+++.+.+.+...... .......
T Consensus 160 ADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 236 (500)
T 2qa1_A 160 CDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVEL---QPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPP 236 (500)
T ss_dssp CCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCC---CCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CC
T ss_pred CCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCC---CCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCC
Confidence 9999999999998876543 233444555544322 1224445566778899999988765554432221 1111345
Q ss_pred ChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhHH
Q 015303 235 HSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDG 314 (409)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a 314 (409)
+.+++.+.+.+.+.... ......+... + .......++|..+||+|+|||||.++|++|||+|+||+||
T Consensus 237 ~~~~~~~~l~~~~~~~~----------~~~~~~~~~~-~-~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA 304 (500)
T 2qa1_A 237 SWHEVADAWKRLTGDDI----------AHAEPVWVSA-F-GNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDA 304 (500)
T ss_dssp CHHHHHHHHHHHHSCCC----------TTSEEEEEEE-E-ECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCC----------CccceeEEEE-e-ccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHH
Confidence 66666666666554110 0111111111 1 1112234577889999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCchhHHHHHHHHHH
Q 015303 315 IVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILA 388 (409)
Q Consensus 315 ~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~ 388 (409)
.+|++.|...+++. ..+.+|+.|+++|++++..++..+..+..++.. ++....+|+.++.
T Consensus 305 ~~La~~La~~~~g~-------------~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~ 364 (500)
T 2qa1_A 305 VNLGWKLGAVVNGT-------------ATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS-GPEVQPLRDVLTE 364 (500)
T ss_dssp HHHHHHHHHHHTTS-------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHH
Confidence 99999999988764 347899999999999999999999988888874 5556677776543
No 3
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=9e-44 Score=336.77 Aligned_cols=349 Identities=21% Similarity=0.260 Sum_probs=240.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCc--ccceeccccHHHHHHHcCchhHHHhcc---ccccceeeee
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVT--GFAFTVWTNAWKALDAVGIGNSLRQQH---QQLRSIVATP 79 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~---~~~~~~~~~~ 79 (409)
++|+||||||+||++|+.|+++|++|+|+||++.+... +.++.+++++++.|+++|+.+.+.... ........+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 58999999999999999999999999999999887544 567888999999999999877664321 1111111111
Q ss_pred cCCCCccccc-ccc-cccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCC-eEEEEecCCcEEeccEEEe
Q 015303 80 TISGKPSSER-SLK-VQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIG 156 (409)
Q Consensus 80 ~~~~~~~~~~-~~~-~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~ 156 (409)
.......... ... ............+.|..|.+.|.+.++ .+|+++++|+++++.++ .++|++.||++++||+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~-~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLA-NTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVG 160 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCT-TTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhcc-ceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEE
Confidence 1111111100 000 011111233457899999999998874 57999999999987654 5999999999999999999
Q ss_pred cCCCchHHHhhhCCCCCc-ccceeeEEEeecCCCCC------CC-CCceeeee--cCCcEEE---EEecC----------
Q 015303 157 CDGVNSIVAKWLGFKNPA-FVGRSAIRGYSDFKGSH------GF-EPNFLQFF--GKGLRSG---FIPCD---------- 213 (409)
Q Consensus 157 AdG~~S~vr~~l~~~~~~-~~~~~~~~~~~~~~~~~------~~-~~~~~~~~--~~~~~~~---~~p~~---------- 213 (409)
|||.+|.+|+.++..... +.+...+.+........ .+ ......+. .++..+. ..|..
T Consensus 161 ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T 4hb9_A 161 ADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVEASLAEI 240 (412)
T ss_dssp CCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSCGGGCCE
T ss_pred CCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEEEeccCC
Confidence 999999999999665443 35555656555432210 00 00011111 1111111 11111
Q ss_pred CCeEEEEEEecCCCc-CcccccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEe
Q 015303 214 DQTIYWFFTWTSSSQ-DKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVA 292 (409)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 292 (409)
++...|.+....+.. ......+.+.+.+.+.+.+..|.+.+..+++......+..+......+. .+|..+||+|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~----~~~~~grv~Li 316 (412)
T 4hb9_A 241 DNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHL----LPWKSSTVTLL 316 (412)
T ss_dssp EEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCC----CCCCCCSEEEC
T ss_pred CceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhcccccc----ccccccCEEEE
Confidence 112233333322222 1224556778888999999999999999998877666655555444333 26788999999
Q ss_pred ccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhhe
Q 015303 293 GDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGS 370 (409)
Q Consensus 293 GDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~ 370 (409)
|||||.++|++|||+|+||+||..|+++|.....+. +.+..+|+.|+++|++++..++..|.....
T Consensus 317 GDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~------------~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 317 GDAIHNMTPMTGSGANTALRDALLLTQKLASVASGH------------EELVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp THHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTS------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCC------------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988763 366889999999999999999999876654
No 4
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=9.5e-43 Score=335.26 Aligned_cols=348 Identities=18% Similarity=0.140 Sum_probs=253.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+|+++|+.|+++|++|+||||.+.+...+++..+++.++++|+++|+++.+... .+.....+ .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~----~ 85 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV-ETSTQGHF----G 85 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC-CEESEEEE----T
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc-ccccccee----c
Confidence 468999999999999999999999999999999998888889999999999999999999887654 22221111 1
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCC--CceEEeCCeEEEEEEeCCeEEEEecCCc---EEeccEEEec
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGT---ILKTKVLIGC 157 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~---~~~ad~vV~A 157 (409)
+. .+++..... .......+++..+.+.|.+.+. +++|+++++|++++++++++++++.++. +++||+||+|
T Consensus 86 ~~---~~~~~~~~~-~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgA 161 (499)
T 2qa2_A 86 GR---PVDFGVLEG-AHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGC 161 (499)
T ss_dssp TE---EEEGGGSTT-CCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEEC
T ss_pred ce---ecccccCCC-CCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEc
Confidence 11 122221111 1123467899999999988663 6899999999999999889999998875 7999999999
Q ss_pred CCCchHHHhhhCCCCCcc-cceeeEEEeecCCCCCCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCC-cCcccccC
Q 015303 158 DGVNSIVAKWLGFKNPAF-VGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSS-QDKELEDH 235 (409)
Q Consensus 158 dG~~S~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 235 (409)
||.+|.+|+.++...+.. .....+.+.+.....+ ..+..++.++++++++|.+++.+.+.+...... .......+
T Consensus 162 DG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~ 238 (499)
T 2qa2_A 162 DGGRSTVRKAAGFDFPGTSASREMFLADIRGCEIT---PRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPP 238 (499)
T ss_dssp CCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCCC---CEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCC
T ss_pred cCcccHHHHHcCCCCCCCCCccEEEEEEEEECCCC---cceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCC
Confidence 999999999998876543 2334445555443221 224445566778899999988765555442221 11113456
Q ss_pred hHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhHHH
Q 015303 236 SAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGI 315 (409)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a~ 315 (409)
.+++.+.+.+.+.... ......+.. .+ .......++|..+||+|+|||||.++|++|||+|+||+||.
T Consensus 239 ~~~~~~~l~~~~~~~~----------~~~~~~~~~-~~-~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~ 306 (499)
T 2qa2_A 239 YQEVAAAWQRLTGQDI----------SHGEPVWVS-AF-GDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSV 306 (499)
T ss_dssp HHHHHHHHHHHHSCCC----------TTCEEEEEE-EE-CCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCC----------CccceeEEE-EE-eCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHH
Confidence 6777776666554110 011111111 11 11122345778899999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCchhHHHHHHHHHH
Q 015303 316 VLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILA 388 (409)
Q Consensus 316 ~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~ 388 (409)
+|++.|...+++. ..+.+|+.|+++|++++..++..+..+..++.. ++....+|+.++.
T Consensus 307 ~La~~La~~l~g~-------------~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~ 365 (499)
T 2qa2_A 307 NLGWKLAAVVSGR-------------APAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS-GDEMQPLRDVLSE 365 (499)
T ss_dssp HHHHHHHHHHTTS-------------SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CGGGHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHH
Confidence 9999999988754 346899999999999999999999988888874 5556677776653
No 5
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.6e-44 Score=336.07 Aligned_cols=356 Identities=17% Similarity=0.201 Sum_probs=259.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|+.|+++|++|+|+|+++.+...+++..+++.+.+.++++|+++.+.....+.....+++. .+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~g 84 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYH-DG 84 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEE-TT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeC-CC
Confidence 48999999999999999999999999999999988777889999999999999999999988776666666655543 23
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCC---CceEEeCCeEEEEEEeCCeE--EEEecCCcEEeccEEEecC
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP---SGTIRYSSQVVSIEESGHFK--LLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v--~v~~~~g~~~~ad~vV~Ad 158 (409)
.....++..... .....+.++|..|.+.|.+.+. +++++++++|++++.+++++ .|++.+|+++++|+||+||
T Consensus 85 ~~~~~~~~~~~~--~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 85 ELLRYFNYSSVD--ARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp EEEEEEETTSSC--GGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECC
T ss_pred CEEEecchHHhc--ccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECC
Confidence 222222222111 1123467899999999998763 68999999999999988888 8999999899999999999
Q ss_pred CCchHHHhhhCCCCC-c--ccce--eeEEEeecCCCCCCCCCceeeeecC-CcEEEEEecCCCeEEEEEEecCCCcCcc-
Q 015303 159 GVNSIVAKWLGFKNP-A--FVGR--SAIRGYSDFKGSHGFEPNFLQFFGK-GLRSGFIPCDDQTIYWFFTWTSSSQDKE- 231 (409)
Q Consensus 159 G~~S~vr~~l~~~~~-~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~- 231 (409)
|.+|.+|+.++.... . +.+. .++.+.+....+. . . .++.+ +.+++++|.+++.+.|.+.+..+.....
T Consensus 163 G~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~--~--~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 237 (399)
T 2x3n_A 163 GIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAER--N--R-LYVDSQGGLAYFYPIGFDRARLVVSFPREEARELM 237 (399)
T ss_dssp CTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHC--E--E-EEECTTSCEEEEEEETTTEEEEEEECCHHHHHHHH
T ss_pred CCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCC--c--c-EEEcCCCcEEEEEEcCCCEEEEEEEeCcccccccc
Confidence 999999999977543 2 3444 5555544322111 1 3 55566 7789999999988877775432211000
Q ss_pred cccChHHHHHHHHHHhCCCChHHH-HHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhh
Q 015303 232 LEDHSAELKQFVLGKLHDLPAQVK-AVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAA 310 (409)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~a 310 (409)
...+.+. +.+.+..+.+.+. ..++......+..+++... ...++|..+||+|+|||||.++|++|||+|+|
T Consensus 238 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~a 309 (399)
T 2x3n_A 238 ADTRGES----LRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGY----LNLDRYWADNVAMLGDAIHNVHPITGQGMNLA 309 (399)
T ss_dssp HSTTSHH----HHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCC----EECSCSEETTEEECGGGTEECCGGGCCHHHHH
T ss_pred ccCCHHH----HHHHHhhcCCcchhhHHhcCCccceEEechhhc----ccccccccCcEEEEechhccCCCcccccHHHH
Confidence 0123333 4444445666552 2334332113333444331 12336778999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCchhHHHHHHHHHH
Q 015303 311 LEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILA 388 (409)
Q Consensus 311 l~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~ 388 (409)
|+||..|++.|.+.++.. ++...+|+.|+++|++++..++..+..+..+++..++...++ +.+++
T Consensus 310 l~da~~La~~L~~~~~~~------------~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~~~~ 374 (399)
T 2x3n_A 310 IEDASALADALDLALRDA------------CALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVF-DTALQ 374 (399)
T ss_dssp HHHHHHHHHHHHHHHTTS------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HC---
T ss_pred HHHHHHHHHHHHhhhccc------------chHHHHHHHHHHHhccHHHHHHHHHHHhhhhhcccCchHHHH-HHHHh
Confidence 999999999999887631 145789999999999999999999999999999888888888 88776
No 6
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=2.6e-42 Score=324.76 Aligned_cols=354 Identities=18% Similarity=0.165 Sum_probs=252.8
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCC--cccceeccc-cHHHHHHHcCchhHHHhccccccceeee
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRV--TGFAFTVWT-NAWKALDAVGIGNSLRQQHQQLRSIVAT 78 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~--~~~~~~~~~-~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
++++||+||||||+|+++|+.|++.|++|+|+||.+.+.. .+.++.+.+ .+.+.|+.+|+++.+.....+... .++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~ 102 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIA 102 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEE
Confidence 4568999999999999999999999999999999876543 344555554 568999999999998876655544 333
Q ss_pred ecCCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecC
Q 015303 79 PTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
+ ..+........+... ......+.|..|.+.|.+.+++++++++++|++++.++++++|++.+|++++||+||+||
T Consensus 103 ~-~~g~~~~~~~~~~~~---~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 178 (398)
T 2xdo_A 103 D-EKGNILSTKNVKPEN---RFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILAN 178 (398)
T ss_dssp C-SSSEEEEECCCGGGT---TSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECS
T ss_pred C-CCCCchhhccccccC---CCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECC
Confidence 3 233322111001111 122336899999999999887789999999999999888899999999889999999999
Q ss_pred CCchHHHhhhCCCCCcccceeeEEEeecCCCC-CC-----CCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCcc-
Q 015303 159 GVNSIVAKWLGFKNPAFVGRSAIRGYSDFKGS-HG-----FEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKE- 231 (409)
Q Consensus 159 G~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~- 231 (409)
|.+|.+|+.++...+.+.+..++.+.+..... .+ .......+++++..+..+|.+++...|++.+..+.....
T Consensus 179 G~~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 2xdo_A 179 GGMSKVRKFVTDTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTPDEWKNQ 258 (398)
T ss_dssp CTTCSCCTTTCCCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEECCTTC---
T ss_pred CcchhHHhhccCCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEecCcccccc
Confidence 99999999987655555566666655432110 00 011223444666667778998888777766543322110
Q ss_pred ---cccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCC-C--cEEEeccCcCCCCCCccc
Q 015303 232 ---LEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISR-G--SVCVAGDALHPMTPDIGQ 305 (409)
Q Consensus 232 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~v~lvGDAA~~~~P~~g~ 305 (409)
...+++...+.+.+.+..+.+.+.+++... ..+..++.....+. .+|.. + ||+|+|||||.++|++||
T Consensus 259 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~rv~LiGDAAh~~~P~~Gq 332 (398)
T 2xdo_A 259 TQVDFQNRNSVVDFLLKEFSDWDERYKELIHTT--LSFVGLATRIFPLE----KPWKSKRPLPITMIGDAAHLMPPFAGQ 332 (398)
T ss_dssp CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHC--SCCEEEEEEECCCC----SCCCSCCSSCEEECTHHHHCCCCTTSC
T ss_pred cccCcCCHHHHHHHHHHHHcCCChHHHHHHhCc--ccceeeeeEeccCC----CCcccCCCccEEEEeehhccCCCccCc
Confidence 124567778888888888888888887652 23333343332221 14443 4 899999999999999999
Q ss_pred chhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhh-HHHHHHHHHHhhhhhHHHHHHHHHHhhe-eeccCchhHHH
Q 015303 306 GGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKR-VEMGLKRYAKERRWRCFELISIAYLVGS-IQQSDGKILNF 381 (409)
Q Consensus 306 G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~-~~~~l~~Y~~~r~~~~~~~~~~s~~~~~-~~~~~~~~~~~ 381 (409)
|+|+||+||..|+++|... +. + ...+|+.|+++|++++..++..+..+.. ++....+...+
T Consensus 333 G~n~ai~Da~~La~~L~~~--~~-------------~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 395 (398)
T 2xdo_A 333 GVNSGLVDALILSDNLADG--KF-------------NSIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKPDFTFQQL 395 (398)
T ss_dssp SHHHHHHHHHHHHHHHHSC--CS-------------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC---
T ss_pred cHHHHHHHHHHHHHHHHhc--cC-------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc
Confidence 9999999999999999873 11 3 6789999999999999999988876654 45555554443
No 7
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=2.7e-42 Score=324.51 Aligned_cols=337 Identities=18% Similarity=0.198 Sum_probs=244.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc-CCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL-RVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~-~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
+++||+||||||+|+++|+.|+++|++|+|+|+.+.+ ...++++.+++.+.+.|+.+|+.+ .....+.....+++..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSISVPSSSMEYVDAL 81 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGTCBCCCEEEEEETT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccccccccceEEEecC
Confidence 4689999999999999999999999999999998775 445778889999999999999877 4445555555555431
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.+........ ....+.+..+.+.|.+.+++++++++++|++++.++++++|++.+|+++++|+||+|||.+
T Consensus 82 ~g~~~~~~~~---------~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 82 TGERVGSVPA---------DWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp TCCEEEEEEC---------CCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred CCCccccccC---------cccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcc
Confidence 3333222111 1124778899999998888899999999999999888999999999999999999999999
Q ss_pred hHHHhhhCCCC-CcccceeeEEEeecCCCCCC-----CCCceeeeecCCcEEEEEecCCC------eEEEEEEecCCCcC
Q 015303 162 SIVAKWLGFKN-PAFVGRSAIRGYSDFKGSHG-----FEPNFLQFFGKGLRSGFIPCDDQ------TIYWFFTWTSSSQD 229 (409)
Q Consensus 162 S~vr~~l~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~~~~~~~ 229 (409)
|.+|+.++ .. +.+.+..++.+.+....... ....+..+.+++..+.++|++++ .+.|+.....+...
T Consensus 153 S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 231 (397)
T 2vou_A 153 SVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGP 231 (397)
T ss_dssp CHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTH
T ss_pred hhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCcc
Confidence 99999998 43 33345556666655322111 01234455577777888888753 44444433322210
Q ss_pred --ccc---------------ccChHHHHHHHHHHhC-CCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEE
Q 015303 230 --KEL---------------EDHSAELKQFVLGKLH-DLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCV 291 (409)
Q Consensus 230 --~~~---------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 291 (409)
... ....+...+.+.+.+. .+++ +.++++.... ...+++... ..++|..+||+|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~-----~~~~~~~grv~L 303 (397)
T 2vou_A 232 DLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNASS--PFVTVVADA-----TVDRMVHGRVLL 303 (397)
T ss_dssp HHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCSS--CEEEEEEEB-----CCSCSEETTEEE
T ss_pred chhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccCC--cceeeeeee-----cCCceecCcEEE
Confidence 000 0002333455555554 5666 7777765422 223343322 123678899999
Q ss_pred eccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhhee
Q 015303 292 AGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSI 371 (409)
Q Consensus 292 vGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~ 371 (409)
+|||||.++|++|||+|+||+||..||++|.. .. ....+|+.|+++|++++..++..+..+..+
T Consensus 304 iGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~-------------~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~ 367 (397)
T 2vou_A 304 IGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NH-------------DLRGSLQSWETRQLQQGHAYLNKVKKMASR 367 (397)
T ss_dssp CGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CS-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccccCCcchhhHHHHHHHHHHHHHHHhc---CC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999975 11 457999999999999999999999998888
Q ss_pred eccC
Q 015303 372 QQSD 375 (409)
Q Consensus 372 ~~~~ 375 (409)
++.+
T Consensus 368 ~~~~ 371 (397)
T 2vou_A 368 LQHG 371 (397)
T ss_dssp HTTT
T ss_pred Hhcc
Confidence 7754
No 8
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=7e-43 Score=340.37 Aligned_cols=352 Identities=18% Similarity=0.112 Sum_probs=247.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|+.|+++|++|+||||.+.+...+++..+++.++++|+++|+++.+...+....... + .+
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~-~---~~ 124 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLP-F---AG 124 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCC-B---TT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCce-e---CC
Confidence 5799999999999999999999999999999999888889999999999999999999999877665433211 1 11
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCC--CceEEeCCeEEEEEEeCCeEEEEe--cCC-cEEeccEEEecC
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHL--ADG-TILKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~--~~g-~~~~ad~vV~Ad 158 (409)
.....+++...... ....+.+.+..+.+.|.+.+. +++|+++++|+++++++++++|++ .+| .+++||+||+||
T Consensus 125 ~~~~~~~~~~~~~~-~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~AD 203 (570)
T 3fmw_A 125 IFTQGLDFGLVDTR-HPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCD 203 (570)
T ss_dssp BCTTCCBGGGSCCS-CCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECS
T ss_pred cccccccccccCCC-CCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcC
Confidence 11112222222111 223457899999999988663 789999999999999988888888 677 689999999999
Q ss_pred CCchHHHhhhCCCCCcc-cceeeEEEeecCCCCCCCCCceeeeecCCcEEEE-EecCCCeE-EEEEEecCCCc-Cccccc
Q 015303 159 GVNSIVAKWLGFKNPAF-VGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGF-IPCDDQTI-YWFFTWTSSSQ-DKELED 234 (409)
Q Consensus 159 G~~S~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~~~~~-~~~~~~ 234 (409)
|.+|.+|+.+++..+.. +....+...+.....+ ..+...+.+.+++++ +|++++.. .+++....... ......
T Consensus 204 G~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~ 280 (570)
T 3fmw_A 204 GGRSTVRRLAADRFPGTEATVRALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPV 280 (570)
T ss_dssp CSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CCC
T ss_pred CCCchHHHHcCCCCccceeeeEEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCC
Confidence 99999999998876654 3444445544443332 122222334445555 79988865 45554443221 111334
Q ss_pred ChHHHHHHHHHHhCCCChHHHHHHHcCCCC-ceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhH
Q 015303 235 HSAELKQFVLGKLHDLPAQVKAVIEKTPLD-SIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALED 313 (409)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~ 313 (409)
+.+++.+.+.+.+. .. +...... ....++.. ....++|..+||+|+|||||.++|++|||+|+||+|
T Consensus 281 ~~~~~~~~l~~~~~---~~----~~~~~~~~~~~~~~~~-----~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~D 348 (570)
T 3fmw_A 281 TLEDLGAAVARVRG---TP----LTLTEPVSWLSRFGDA-----SRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQD 348 (570)
T ss_dssp CHHHHHHHTTSSSS---CC----CCCCSCCEEEEEECCC-----CEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHhh---cc----cccceeeeeeEEeecc-----cccccccccCCEEEEEecceecCCCcCcCHhHHHHH
Confidence 44444443333221 11 1111111 22223322 223457788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCchhHHHHHHHHHH
Q 015303 314 GIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILA 388 (409)
Q Consensus 314 a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~ 388 (409)
|.+|++.|...+++. ....+|+.|+++|++++..++..+..+..+++...+....+|+.++.
T Consensus 349 A~~La~~La~~~~g~-------------~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~lR~~~~~ 410 (570)
T 3fmw_A 349 AVNLGWKLAARVRGW-------------GSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEE 410 (570)
T ss_dssp HHHHHHHHHHHHHSC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999988754 44789999999999999999999999999998866658889988875
No 9
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=1.7e-41 Score=320.44 Aligned_cols=339 Identities=25% Similarity=0.316 Sum_probs=236.2
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCc-eEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeee
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIR-SMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATP 79 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~-V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 79 (409)
||.++||+||||||+|+++|+.|+++|++ |+|+||.+.+...++++.+++.+++.|+.+|+++.+...+.+...+.+++
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~ 80 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYID 80 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEc
Confidence 77789999999999999999999999999 99999998888788999999999999999999999988777666665554
Q ss_pred cCCCCcccccccccccccCCccceeccHHHHHHHHHhhCC---C-ceEEeCCeEEEEEEeCCeEEEEecC---C--cEEe
Q 015303 80 TISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP---S-GTIRYSSQVVSIEESGHFKLLHLAD---G--TILK 150 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~-~~i~~~~~v~~i~~~~~~v~v~~~~---g--~~~~ 150 (409)
. .+........... .........+.|..|.+.|.+.+. + ++++++++|++++. ++++++++.+ | .+++
T Consensus 81 ~-~g~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ 157 (410)
T 3c96_A 81 Q-SGATVWSEPRGVE-AGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALG 157 (410)
T ss_dssp T-TSCEEEEEECGGG-GTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEE
T ss_pred C-CCCEEeeccCCcc-ccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEe
Confidence 3 3332222111100 111223467899999999988762 3 58999999999988 6778888875 6 4799
Q ss_pred ccEEEecCCCchHHHhhhCCCC--CcccceeeEEEeecCCCCCCCCCceeeeec--CCcEEEEEecCC-----C--eEEE
Q 015303 151 TKVLIGCDGVNSIVAKWLGFKN--PAFVGRSAIRGYSDFKGSHGFEPNFLQFFG--KGLRSGFIPCDD-----Q--TIYW 219 (409)
Q Consensus 151 ad~vV~AdG~~S~vr~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~-----~--~~~~ 219 (409)
||+||+|||.+|.+|+.++... +.+.+...+.+........ ......+++ .+.+++++|+++ + .+.|
T Consensus 158 ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w 235 (410)
T 3c96_A 158 ADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFL--DGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNW 235 (410)
T ss_dssp ESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCT--TSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEE
T ss_pred cCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccccc--CCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEE
Confidence 9999999999999999986543 2334445555554432211 122233333 355788899863 2 4556
Q ss_pred EEEecCCC---cCcccccChHHHHHHHHHHhCCCCh---HHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEec
Q 015303 220 FFTWTSSS---QDKELEDHSAELKQFVLGKLHDLPA---QVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAG 293 (409)
Q Consensus 220 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 293 (409)
.+...... .............+.+++.+..+.. .+..++... ..+..+++....+ .++|..+||+|||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~----~~~~~~grv~LvG 309 (410)
T 3c96_A 236 VCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRN--QLILQYPMVDRDP----LPHWGRGRITLLG 309 (410)
T ss_dssp EEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTC--SEEEEEEEEECCC----CSCCCBTTEEECT
T ss_pred EEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcC--cccceeecccCCC----ccccccCCEEEEe
Confidence 55443210 0000011111113455666665543 245556544 2334444433322 2367889999999
Q ss_pred cCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHH
Q 015303 294 DALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAY 366 (409)
Q Consensus 294 DAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~ 366 (409)
||||.++|++|||+|+||+||..|++.|... . ....+|+.|+++|++++..++..++
T Consensus 310 DAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~-------------~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 310 DAAHLMYPMGANGASQAILDGIELAAALARN---A-------------DVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---S-------------SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCccchhHHHHHHHHHHHHHHHhcc---C-------------CHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999872 1 4578999999999999999988876
No 10
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=3e-41 Score=329.11 Aligned_cols=355 Identities=17% Similarity=0.170 Sum_probs=242.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccc---eeeeec
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRS---IVATPT 80 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~---~~~~~~ 80 (409)
++||+||||||+|+++|+.|+++|++|+|+||.+.+...+++..+++.+++.|+++|+.+.+.+.+.+... ..+...
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 47999999999999999999999999999999988888888999999999999999999999887665532 222222
Q ss_pred CCCCcccccccccccc-----cCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecC---C--cEEe
Q 015303 81 ISGKPSSERSLKVQGK-----YGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD---G--TILK 150 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~-----~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~---g--~~~~ 150 (409)
..+..+..+.+..... ........+.+..+.+.|.+.+... |+++++|+++++++++|++++.+ | .+++
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~ 184 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLRTGATRAVH 184 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETTTCCEEEEE
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEE
Confidence 2333322333221110 1123446789999999999887555 99999999999988888888876 6 3799
Q ss_pred ccEEEecCCCchHHHhhhCCCCCccc-ceeeEEEeecCCCCC---CCCC-ceeeeecCC-cEEEEEecCCCeEEEEEEec
Q 015303 151 TKVLIGCDGVNSIVAKWLGFKNPAFV-GRSAIRGYSDFKGSH---GFEP-NFLQFFGKG-LRSGFIPCDDQTIYWFFTWT 224 (409)
Q Consensus 151 ad~vV~AdG~~S~vr~~l~~~~~~~~-~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~ 224 (409)
||+||+|||.+|.+|+.++...+... ....+...+..+... .... .+..++.++ ..++++|.+++.. |.+...
T Consensus 185 a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~-~~~~~~ 263 (549)
T 2r0c_A 185 ARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGL-YRLTVG 263 (549)
T ss_dssp EEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSE-EEEEEE
T ss_pred eCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcE-EEEEec
Confidence 99999999999999999988765432 223333334332110 0011 222333444 6778899976432 444332
Q ss_pred CCCcCcccccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcc
Q 015303 225 SSSQDKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIG 304 (409)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g 304 (409)
.+.. . .+.+++.+.+.+.+.. ... ..+.....++.. ....++|..+||+|+|||||.++|++|
T Consensus 264 ~~~~---~-~~~~~~~~~l~~~~~~-~~~-------~~~~~~~~~~~~-----~~~a~~~~~grv~L~GDAAH~~~P~~G 326 (549)
T 2r0c_A 264 VDDA---S-KSTMDSFELVRRAVAF-DTE-------IEVLSDSEWHLT-----HRVADSFSAGRVFLTGDAAHTLSPSGG 326 (549)
T ss_dssp CSTT---C-CSCCCHHHHHHHHBCS-CCC-------CEEEEEEEEEEC-----CEECSCSEETTEEECGGGTEECCCGGG
T ss_pred CCCC---C-CCHHHHHHHHHHHhCC-CCc-------eeEEEEecchhH-----hhhHHhhcCCcEEEEccccccCCCccC
Confidence 2111 1 3445556666665542 100 001111122221 223457778999999999999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccC---------
Q 015303 305 QGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSD--------- 375 (409)
Q Consensus 305 ~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~--------- 375 (409)
||||+||+||.+|+++|...+++. ..+.+|+.|+++|++++..++..+..+..++...
T Consensus 327 qG~n~gi~DA~~La~~La~~l~g~-------------a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~ 393 (549)
T 2r0c_A 327 FGMNTGIGSAADLGWKLAATLRGW-------------AGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDD 393 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-------------SCTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCC
T ss_pred CccccccHHHHHHHHHHHHHHcCC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence 999999999999999999988764 3357899999999999999999999988887642
Q ss_pred chhHHHHHHHHHHHH
Q 015303 376 GKILNFLRDKILASF 390 (409)
Q Consensus 376 ~~~~~~~r~~~~~~~ 390 (409)
++....+|+.+.+.+
T Consensus 394 ~~~~~~~R~~~~~~~ 408 (549)
T 2r0c_A 394 GPRGERIRAAVAEKL 408 (549)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHH
Confidence 566777787776644
No 11
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=8.2e-41 Score=326.17 Aligned_cols=348 Identities=20% Similarity=0.209 Sum_probs=246.4
Q ss_pred CC-CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhcccccccee---
Q 015303 1 ME-SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIV--- 76 (409)
Q Consensus 1 m~-~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~--- 76 (409)
|+ .++||+||||||+|+++|+.|+++|++|+||||++.+...+++..+++.++++|+++|+++.+...+.+.....
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCE
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCccccccee
Confidence 44 46899999999999999999999999999999999888888999999999999999999999988776554331
Q ss_pred --eeecCCCCccccc--cccc----ccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCC----eEEEE
Q 015303 77 --ATPTISGKPSSER--SLKV----QGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGH----FKLLH 142 (409)
Q Consensus 77 --~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~----~v~v~ 142 (409)
......+..+..+ .+.. .....+.....+++..|.+.|.+.+ .+++++++++|++++++++ +++++
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~ 160 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTAR 160 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEE
T ss_pred eeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEE
Confidence 2222233322211 1111 0111133356789999999998876 3689999999999999988 89999
Q ss_pred ecCC---cEEeccEEEecCCCchHHHhhhCCCCCccccee-eEEEeecCCCCC--CCCC-ceeeeecCCcEEEEEecCCC
Q 015303 143 LADG---TILKTKVLIGCDGVNSIVAKWLGFKNPAFVGRS-AIRGYSDFKGSH--GFEP-NFLQFFGKGLRSGFIPCDDQ 215 (409)
Q Consensus 143 ~~~g---~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~-~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~p~~~~ 215 (409)
+.++ .+++||+||+|||.+|.+|+.++++.+...... .+...+...... .... .+..+..++...+++|.+++
T Consensus 161 ~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~ 240 (535)
T 3ihg_A 161 LAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRP 240 (535)
T ss_dssp EEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSST
T ss_pred EEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCC
Confidence 8886 689999999999999999999988765442221 212222221111 1111 23344466667788899874
Q ss_pred -eEEEEEEecCCCcCcccccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEecc
Q 015303 216 -TIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGD 294 (409)
Q Consensus 216 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGD 294 (409)
.+.+.+.+.++........+.+.+.+.+.+.+......+ .......++.. ....++|..+||+|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~-----~~~a~~~~~grv~LvGD 308 (535)
T 3ihg_A 241 DRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKP-------ELVDIQGWEMA-----ARIAERWREGRVFLAGD 308 (535)
T ss_dssp TEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCC-------EEEEEEEEEEE-----EEEESCSEETTEEECTT
T ss_pred CEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCce-------eEEEeeEeeee-----EEEECccccCCEEEEec
Confidence 433333333332222245566677777766554211110 11112222222 22345778899999999
Q ss_pred CcCCCCCCcccchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeec
Q 015303 295 ALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ 373 (409)
Q Consensus 295 AA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~ 373 (409)
|||.++|++|||+|+||+||.+|++.|...+++. ..+.+|+.|+++|++++..++..|..+...+.
T Consensus 309 AAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~-------------~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~ 374 (535)
T 3ihg_A 309 AAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQ-------------AGAGLLDTYEDERKVAAELVVAEALAIYAQRM 374 (535)
T ss_dssp TTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTS-------------SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCccCCccccccccHHHHHHHHHHHhcCC-------------CcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhc
Confidence 9999999999999999999999999999988764 34678999999999999999999988776554
No 12
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=3e-41 Score=334.67 Aligned_cols=347 Identities=16% Similarity=0.164 Sum_probs=245.8
Q ss_pred cccEEEECCChHHHHHHHHHHH-----cCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeee
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYR-----LGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVAT 78 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~-----~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
++||+||||||+||++|+.|++ .|++|+||||.+.+...+++..+++.++++|+++|+++.+...+.+...+.++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5799999999999999999999 99999999999888888899999999999999999999998888777777766
Q ss_pred ecCC-CCccccccccccc-ccCCccceeccHHHHHHHHHhhCC-----CceEEeCCeEEEEEEeC--------CeEEEEe
Q 015303 79 PTIS-GKPSSERSLKVQG-KYGEHEMRCVRRKLLLETLAKELP-----SGTIRYSSQVVSIEESG--------HFKLLHL 143 (409)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~-----~~~i~~~~~v~~i~~~~--------~~v~v~~ 143 (409)
.... +.......+.... ....+....++|..+.+.|.+.+. +++|+++++|++++.++ ..|++++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~ 167 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTL 167 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEE
Confidence 5432 2111111111110 111334567999999999988763 37999999999998865 4577765
Q ss_pred c------------------------------------------CC--cEEeccEEEecCCCchHHHhhhCCCCCccccee
Q 015303 144 A------------------------------------------DG--TILKTKVLIGCDGVNSIVAKWLGFKNPAFVGRS 179 (409)
Q Consensus 144 ~------------------------------------------~g--~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~ 179 (409)
. +| ++++||+||+|||.+|.||++++..........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~ 247 (665)
T 1pn0_A 168 RYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDY 247 (665)
T ss_dssp EECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEE
T ss_pred EecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccE
Confidence 3 34 478999999999999999999988765443322
Q ss_pred eEEEeecC---CCCCCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcC----cccccChHHHHHHHHHHhCCCCh
Q 015303 180 AIRGYSDF---KGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQD----KELEDHSAELKQFVLGKLHDLPA 252 (409)
Q Consensus 180 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 252 (409)
.| +..+. ...........++..++++++++|.+++.+.+++.+...... .....+.+++.+.+.+.+..+..
T Consensus 248 ~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~ 326 (665)
T 1pn0_A 248 IW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTF 326 (665)
T ss_dssp EE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCC
T ss_pred EE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCcccC
Confidence 22 22221 111111112222223456788999999877666665543211 11345666666666655542211
Q ss_pred HHHHHHHcCCCCceEeecccccCcccccccccC-CCcEEEeccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhccCCC
Q 015303 253 QVKAVIEKTPLDSIISSRLQYRQPQEVLWGNIS-RGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGV 331 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~ 331 (409)
. ...+.++..+. ......++|. .+||+|+|||||.++|++|||||+||+||.+|++.|...+++.
T Consensus 327 ~---------~~~~~~~~~~~--~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~--- 392 (665)
T 1pn0_A 327 D---------VQQLDWFTAYH--IGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGR--- 392 (665)
T ss_dssp E---------EEEEEEEEEEE--EEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred c---------eeeEEEEEeee--ccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCC---
Confidence 1 11222222211 1122345677 7999999999999999999999999999999999999988764
Q ss_pred CCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccC
Q 015303 332 GEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSD 375 (409)
Q Consensus 332 ~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 375 (409)
..+.+|+.|+++|++++..++..+..+..++...
T Consensus 393 ----------a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~ 426 (665)
T 1pn0_A 393 ----------AKRDILKTYEEERQPFAQALIDFDHQFSRLFSGR 426 (665)
T ss_dssp ----------BCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3467899999999999999999999988888644
No 13
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=7.7e-42 Score=319.55 Aligned_cols=324 Identities=21% Similarity=0.279 Sum_probs=233.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|+.|+++|++|+|+|+.+.+...+++..+++.+.+.|+++|+++.+...+.+...+.+++. +
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--g 88 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH--N 88 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET--T
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC--C
Confidence 58999999999999999999999999999999988877789999999999999999999999887777777777654 4
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.....++.. ......++|..|.+.|.+.+ .+++++++++|++++. ++ .|++.+|++++||+||+|||.+
T Consensus 89 ~~~~~~~~~------~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~--~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 89 KSVSKETFN------GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG--RLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp EEEEEECGG------GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT--EEEETTSCEEECSEEEECCCTT
T ss_pred ceeeeccCC------CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC--EEEECCCCEEEcCEEEECCCcc
Confidence 333222221 12356899999999998866 3689999999999987 43 7888889899999999999999
Q ss_pred hHHHhhhCCCC-CcccceeeEEEeecCCC---CCCCCC-ceee--eecCCcEEEEEecCCCeEEEEEEecCCCcCccccc
Q 015303 162 SIVAKWLGFKN-PAFVGRSAIRGYSDFKG---SHGFEP-NFLQ--FFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELED 234 (409)
Q Consensus 162 S~vr~~l~~~~-~~~~~~~~~~~~~~~~~---~~~~~~-~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (409)
|.+|+.++... +.+.+..++.+.+.... +..... .... +++++.+++++|.+++..+|++........
T Consensus 160 s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----- 234 (379)
T 3alj_A 160 SKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPR----- 234 (379)
T ss_dssp CHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTCTT-----
T ss_pred HHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCCCC-----
Confidence 99999997632 22345555566555421 111111 2222 567777899999999988887776542110
Q ss_pred ChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhHH
Q 015303 235 HSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDG 314 (409)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a 314 (409)
++.+.+.+......++ .+.+++.......+..++..... ..++|..+||+|||||||.++|++|||+|+||+||
T Consensus 235 -~~~l~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da 308 (379)
T 3alj_A 235 -GSSVPIDLEVWVEMFP-FLEPCLIEAAKLKTARYDKYETT----KLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNA 308 (379)
T ss_dssp -TTCSSCCHHHHHHHCG-GGHHHHHHHHTCTTCCEEEEEEE----EESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHH
T ss_pred -HHHHHHHHhcCCchhc-cHHHHHhhCCccceEEecccccC----CCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHH
Confidence 1111111111111111 11133332111122223332211 12367789999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHH
Q 015303 315 IVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIA 365 (409)
Q Consensus 315 ~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s 365 (409)
..|++.|... . ....+|+.|+++|++++..++..+
T Consensus 309 ~~La~~L~~~---~-------------~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 309 FSLSQDLEEG---S-------------SVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHHTTSS---S-------------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccc---c-------------CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999752 1 457899999999999999999888
No 14
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=8.7e-41 Score=314.28 Aligned_cols=356 Identities=16% Similarity=0.151 Sum_probs=241.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc--CCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL--RVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~--~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++||+||||||+|+++|+.|++.|++|+|+|+.+.+ ....++..+++.+.+.|+++|+++.+.+.+.+...+.+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~- 80 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA- 80 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET-
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC-
Confidence 489999999999999999999999999999998753 22334556899999999999999999877776666666542
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeC-CeEEEEe-cCCc--EEeccEEE
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESG-HFKLLHL-ADGT--ILKTKVLI 155 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~-~~v~v~~-~~g~--~~~ad~vV 155 (409)
+.. ..+++.... .....+.+.+..+.+.|.+.+ .+++++++++|++++.++ +.+.|++ .+|+ +++||+||
T Consensus 81 -~~~-~~~~~~~~~--~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 81 -GQR-RRIDLKRLS--GGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIA 156 (394)
T ss_dssp -TEE-EEECHHHHH--TSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEE
T ss_pred -Cce-EEecccccc--CCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEE
Confidence 211 122222111 122345678888888777654 378999999999998764 5678887 6786 79999999
Q ss_pred ecCCCchHHHhhhCCCCC-cccce--eeEEEeecCCCCCCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCccc
Q 015303 156 GCDGVNSIVAKWLGFKNP-AFVGR--SAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKEL 232 (409)
Q Consensus 156 ~AdG~~S~vr~~l~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 232 (409)
+|||.+|.+|+.++.... .+... ..+.+........ .........++.+.++.|.+++...|++....... ..
T Consensus 157 ~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~ 232 (394)
T 1k0i_A 157 GCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPV--SHELIYANHPRGFALCSQRSATRSQYYVQVPLSEK--VE 232 (394)
T ss_dssp ECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCS--CSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCC--GG
T ss_pred ECCCCCcHHHHhcCccccccccccccceeEEEecCCCCC--ccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCC--cc
Confidence 999999999999875422 12222 2233332211111 11222222344455566666666666665544321 12
Q ss_pred ccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhh
Q 015303 233 EDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALE 312 (409)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~ 312 (409)
..+.+...+.+.+.+ .......+...+.......+... ...++|..+||+|+|||||.++|++|||+|+||+
T Consensus 233 ~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~ 304 (394)
T 1k0i_A 233 DWSDERFWTELKARL---PSEVAEKLVTGPSLEKSIAPLRS-----FVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAAS 304 (394)
T ss_dssp GCCHHHHHHHHHHTS---CHHHHHHCCCCCEEEEEEEEEEE-----EEEECSEETTEEECGGGTEECCGGGTCHHHHHHH
T ss_pred ccCHHHHHHHHHHhh---CcccccccccCcceeeEEEEhhh-----hhccccccCCEEEEechhhcCCCcccchHHHHHH
Confidence 345555666666643 33222112111111111122211 1233567899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeec---cCchhHHHHHHHHHHH
Q 015303 313 DGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ---SDGKILNFLRDKILAS 389 (409)
Q Consensus 313 ~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~---~~~~~~~~~r~~~~~~ 389 (409)
||..|++.|...+.+. ...+|+.|+++|++++..++..+..+..+++ ..+++..++|+..++.
T Consensus 305 da~~La~~L~~~~~~~--------------~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~ 370 (394)
T 1k0i_A 305 DVSTLYRLLLKAYREG--------------RGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEY 370 (394)
T ss_dssp HHHHHHHHHHHHHHHC--------------CGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC--------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Confidence 9999999999876542 2468999999999999999999888666665 3467788888888874
Q ss_pred H
Q 015303 390 F 390 (409)
Q Consensus 390 ~ 390 (409)
+
T Consensus 371 ~ 371 (394)
T 1k0i_A 371 Y 371 (394)
T ss_dssp H
T ss_pred h
Confidence 3
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=8.4e-40 Score=324.00 Aligned_cols=347 Identities=17% Similarity=0.196 Sum_probs=235.7
Q ss_pred CcccEEEECCChHHHHHHHHHHH-cCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYR-LGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~-~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
.++||+||||||+||++|+.|++ .|++|+||||.+.+...+++..+++.++++|+++|+.+.+...+.+.....++...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 35899999999999999999999 99999999999988888899999999999999999999998877766666665432
Q ss_pred ---CCCcccccccccc-cccCCccceeccHHHHHHHHHhhCC--Cc--eEEeCCeEEEEEEeCC----eEEEEec-----
Q 015303 82 ---SGKPSSERSLKVQ-GKYGEHEMRCVRRKLLLETLAKELP--SG--TIRYSSQVVSIEESGH----FKLLHLA----- 144 (409)
Q Consensus 82 ---~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~--~~--~i~~~~~v~~i~~~~~----~v~v~~~----- 144 (409)
.+.......+... ..........+++..+.+.|.+.+. ++ +|+++++|++++++++ .++|++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 1221111111110 0111233457899999999988762 34 9999999999998763 5777765
Q ss_pred -CC--cEEeccEEEecCCCchHHHhhhCCCCCcccceeeEEEeecC---CCCCCCCCceeeeecCCcEEEEEecCCC-eE
Q 015303 145 -DG--TILKTKVLIGCDGVNSIVAKWLGFKNPAFVGRSAIRGYSDF---KGSHGFEPNFLQFFGKGLRSGFIPCDDQ-TI 217 (409)
Q Consensus 145 -~g--~~~~ad~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~ 217 (409)
+| .+++||+||+|||.+|.+|+.++...+.......+ +.... .............. ++++++++|.+++ .+
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~-~~g~~~~~P~~~~~~~ 268 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQS-EQGNVLIIPREGGHLV 268 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEE-TTEEEEEEECTTSSCE
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceE-EEEEEEEccCCCccceeEEEEc-CCceEEEEEcCCCcEE
Confidence 45 47999999999999999999998775543222222 21111 11111111122222 5667889999888 55
Q ss_pred EEEEEecC--CCc-CcccccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccC---------
Q 015303 218 YWFFTWTS--SSQ-DKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNIS--------- 285 (409)
Q Consensus 218 ~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 285 (409)
.+++.+.. +.. ......+.+++.+.+.+.+..+... ...+.++..+.. .....++|.
T Consensus 269 r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~--~~~~a~~~~~~~~~~~~~ 337 (639)
T 2dkh_A 269 RFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLE---------VKNVPWWSVYEI--GQRICAKYDDVVDAVATP 337 (639)
T ss_dssp EEEEECC-----------CCCHHHHHHHHHHHHTTSCEE---------EEEEEEEEEECC--CCEECSCSBSCCCSSCCT
T ss_pred EEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCc---------ceeeeEEEeccc--ccchhhhhhccccccccc
Confidence 55554432 111 0112345566666655544322111 112222221110 111233454
Q ss_pred ---CCcEEEeccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHH
Q 015303 286 ---RGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELI 362 (409)
Q Consensus 286 ---~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~ 362 (409)
.+||+|+|||||.++|++|||||+||+||.+|++.|...+++. ..+.+|+.|+++|++++..++
T Consensus 338 ~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~-------------a~~~lL~~Ye~eR~~~a~~~~ 404 (639)
T 2dkh_A 338 DSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQ-------------CAPELLHTYSSERQVVAQQLI 404 (639)
T ss_dssp TSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTS-------------BCGGGGHHHHHHHHHHHHHHH
T ss_pred cCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCC-------------CcHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999988764 345789999999999999999
Q ss_pred HHHHHhheeeccC
Q 015303 363 SIAYLVGSIQQSD 375 (409)
Q Consensus 363 ~~s~~~~~~~~~~ 375 (409)
..+..+..+++..
T Consensus 405 ~~s~~~~~~~~~~ 417 (639)
T 2dkh_A 405 DFDREWAKMFSDP 417 (639)
T ss_dssp HHHHHSCC-----
T ss_pred HHHHHHHHHhcCC
Confidence 9999999888754
No 16
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.1e-38 Score=300.21 Aligned_cols=331 Identities=14% Similarity=0.121 Sum_probs=212.0
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcC-CcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLR-VTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~-~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++|||+||||||||+++|+.|+++|++|+|+||++.+. ...++..+++ ..++.+++...............++..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~---~~l~~l~~~~~~~~~~~~~~~~~~~~~ 78 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSFIANEVKGARIYGP 78 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTTEEEEESEEEEECT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCH---HHHHHcCCCchhhhhhcccceEEEEeC
Confidence 456999999999999999999999999999999987764 3446777776 456777765443333334445555443
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEe--cCC--cEEeccEE
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHL--ADG--TILKTKVL 154 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~--~~g--~~~~ad~v 154 (409)
..... ...... .......+.++|..|.+.|++.+ .+++++++++|+++..+++.+.... .++ .+++||+|
T Consensus 79 ~~~~~-~~~~~~---~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~v 154 (397)
T 3oz2_A 79 SEKRP-IILQSE---KAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMV 154 (397)
T ss_dssp TCSSC-EEEECS---SSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEE
T ss_pred CCceE-eecccc---ccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEE
Confidence 22211 111111 11233456899999999998876 3789999999999998887754332 233 26899999
Q ss_pred EecCCCchHHHhhhCCCCCcccceeeE-EEeecCCCCCCCCCceeeee---cCCcEEEEEecCCCeEEEEEEecCCCcCc
Q 015303 155 IGCDGVNSIVAKWLGFKNPAFVGRSAI-RGYSDFKGSHGFEPNFLQFF---GKGLRSGFIPCDDQTIYWFFTWTSSSQDK 230 (409)
Q Consensus 155 V~AdG~~S~vr~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 230 (409)
|+|||.+|.+|+.++............ ............+.....++ .++.+.+++|.+++.....+....+..
T Consensus 155 IgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~-- 232 (397)
T 3oz2_A 155 IAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI-- 232 (397)
T ss_dssp EECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTS--
T ss_pred EeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchh--
Confidence 999999999999998765433221111 11111111111122222332 456788999999987655554443322
Q ss_pred ccccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhh
Q 015303 231 ELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAA 310 (409)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~a 310 (409)
.......+.+.+.+... +.+ .............. .......+..+|++++|||||.++|++|||+|+|
T Consensus 233 ---~~~~~~~~~l~~~~~~~-~~l----~~~~~~~~~~~~~~----~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A 300 (397)
T 3oz2_A 233 ---HNRFELKNYLDRFIENH-PGL----KKGQDIQLVTGGVS----VSKVKMPITMPGLMLVGDAARLIDPITGGGIANA 300 (397)
T ss_dssp ---CSHHHHHHHHHHHHHTC-HHH----HTSEEEEEEEEEEE----CCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHH
T ss_pred ---hhhhhHHHHHHHHHHhC-ccc----cccceeeeeecccc----ccCcccceeeeeEEEcccccccCCCCcchhHHHH
Confidence 12223333333322222 222 11111111111111 1112224567899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHH
Q 015303 311 LEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIA 365 (409)
Q Consensus 311 l~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s 365 (409)
|+||..||+.|.+++.++| ..++.|+.|++.++++........
T Consensus 301 ~~~g~~~A~~i~~~l~~~~------------~~~~~L~~Ye~~~~~~~~~~~~~~ 343 (397)
T 3oz2_A 301 IVSGMYAAQVTKEAIESND------------YSPQMMQKYEKLIKERFERKHLRN 343 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTC------------CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC------------ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988642 457899999998887765544333
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=8.3e-38 Score=302.84 Aligned_cols=352 Identities=14% Similarity=0.110 Sum_probs=238.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHH-HHHHcCchhHHHhccccccceeeeecCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWK-ALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~-~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
++||+||||||+|+++|+.|+++|++|+|+|+.+.+... .+..+.+.... +++.+|+++.+............+....
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQ-IGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCC-SCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCC-CCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 489999999999999999999999999999999765433 45566666554 8899999988877665544433332222
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCe---EEEEecCCc--EEeccEEE
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF---KLLHLADGT--ILKTKVLI 155 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~---v~v~~~~g~--~~~ad~vV 155 (409)
......+.+...........+.++|..|.+.|.+.+ .+++++++++|+++..+++. +++...+|+ +++||+||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI 165 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIV 165 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEE
Confidence 211111222211112233456799999999998866 57999999999999998875 455566674 79999999
Q ss_pred ecCCCchHHHhhhCCCCCc-ccceeeEEEeecCCCC--CCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCccc
Q 015303 156 GCDGVNSIVAKWLGFKNPA-FVGRSAIRGYSDFKGS--HGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKEL 232 (409)
Q Consensus 156 ~AdG~~S~vr~~l~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 232 (409)
+|||.+|.+|+.++..... +....++.+++..... .+..........++++++++|+++++..+.+....+.... .
T Consensus 166 ~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~-~ 244 (512)
T 3e1t_A 166 DASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEA-I 244 (512)
T ss_dssp ECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTT-T
T ss_pred ECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhh-h
Confidence 9999999999999654322 2345555655543211 1112223334445568999999998776666654332211 1
Q ss_pred ccChHHHHHHHHHHhCCCChHHHHHHHcCCCC-ceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhh
Q 015303 233 EDHSAELKQFVLGKLHDLPAQVKAVIEKTPLD-SIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAAL 311 (409)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al 311 (409)
..+.++....++ ...+.+.+.+...... ......+....+......++..+|+++||||||.++|++|||+|+|+
T Consensus 245 ~~~~~~~~~~~l----~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al 320 (512)
T 3e1t_A 245 KDGHEAALLRYI----DRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLAT 320 (512)
T ss_dssp SSCHHHHHHHHH----HTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHH
T ss_pred cCCHHHHHHHHH----HhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHH
Confidence 223333333333 3456666666543111 00011111111122233466788999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeec
Q 015303 312 EDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ 373 (409)
Q Consensus 312 ~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~ 373 (409)
+||..|++.|...+.+. .....+|+.|++.|+++...+.+.....+.+..
T Consensus 321 ~dA~~La~~L~~~l~~~------------~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~ 370 (512)
T 3e1t_A 321 YSALLVARAINTCLAGE------------MSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQ 370 (512)
T ss_dssp HHHHHHHHHHHHHTTTC------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHcCC------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999987653 256789999999999999999998887777664
No 18
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=9.3e-37 Score=297.61 Aligned_cols=347 Identities=15% Similarity=0.097 Sum_probs=237.1
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
||+++||+||||||+|+++|+.|+++|++|+|+|+.+.+.. +.+..+.+.+...++.+|+++.+............+..
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~-~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 98 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY-RVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLW 98 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC-CCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEEC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC-ceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEe
Confidence 45679999999999999999999999999999999976554 45788999999999999999888776544332222222
Q ss_pred CCCCcccccccccccc--cCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEe-CCeEEEEec-CC--cEEecc
Q 015303 81 ISGKPSSERSLKVQGK--YGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEES-GHFKLLHLA-DG--TILKTK 152 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~-~~~v~v~~~-~g--~~~~ad 152 (409)
..........+..... ......+.++|..|.+.|.+.+ .+++++++++|+++..+ ++.+.|++. +| .+++||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~Ad 178 (591)
T 3i3l_A 99 GQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESD 178 (591)
T ss_dssp SSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEES
T ss_pred cCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcC
Confidence 2221111222211111 1123456789999999998766 57999999999999876 556788877 66 479999
Q ss_pred EEEecCCCchHHHhhhCCCCCcc-cceeeEEEeecCCC--CCCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcC
Q 015303 153 VLIGCDGVNSIVAKWLGFKNPAF-VGRSAIRGYSDFKG--SHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQD 229 (409)
Q Consensus 153 ~vV~AdG~~S~vr~~l~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 229 (409)
+||+|||.+|.+|+.++...... ....++..++.... +.+..........++++++++|.+++.+.+.+....+...
T Consensus 179 lVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~ 258 (591)
T 3i3l_A 179 FVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSA 258 (591)
T ss_dssp EEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHH
T ss_pred EEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHh
Confidence 99999999999999997764332 22233333333221 1122223333445666899999999877666655433221
Q ss_pred cccccChHHHHHHHHHHhCCCChHHHHHHHcCCC-CceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchh
Q 015303 230 KELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPL-DSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGC 308 (409)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~ 308 (409)
.....+.+ .+.+.+....+.+...+..... ......+. +......+..+|+++||||||+++|+.|+|+|
T Consensus 259 ~l~~~~~~----~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGin 329 (591)
T 3i3l_A 259 EVREQGAD----AFYSSTLAKCAKAMDILGGAEQVDEVRIVQD-----WSYDTEVFSADRFFLCGDAACFTDPLFSQGVH 329 (591)
T ss_dssp HHHHHCHH----HHHHHHHTTCHHHHHHHTTCEECSCCEEEEE-----EEEEESCSEETTEEECGGGTCBCCGGGCCHHH
T ss_pred hhccCCHH----HHHHHHHHhCHHHHHHHhcCccccCceEecc-----cccchhhcccCCEEEEccccccCCCcccccHH
Confidence 11112222 2333333445556565553221 11111111 11223366789999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 015303 309 AALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVG 369 (409)
Q Consensus 309 ~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~ 369 (409)
+|++||..||+.|.+.+.+. +....+++.|++.++.+...+.+.....+
T Consensus 330 lAl~dA~~LA~~L~~~l~~~------------~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 330 LASQSAVSAAAAIDRITRHG------------DEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHCG------------GGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC------------chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987753 35678999999999999999998888777
No 19
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=1.9e-36 Score=285.18 Aligned_cols=338 Identities=13% Similarity=0.110 Sum_probs=225.0
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCC-cccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRV-TGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|+++||+||||||+|+++|+.|+++|++|+|+|+++.+.. ..++..+++ +.++.+|+++.............+...
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~---~~~~~lg~~~~~~~~~~~~~~~~~~~~ 78 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSFIANEVKGARIYGP 78 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTTEEEEESEEEEECT
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCH---HHHHHcCCCCChHHhhhhcceEEEEcC
Confidence 4568999999999999999999999999999999986543 445555544 677888886553333344455555443
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE-EEec---CCcEEeccEE
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLA---DGTILKTKVL 154 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~---~g~~~~ad~v 154 (409)
. +.....+...... ....+.++|..|.+.|.+.+ .+++++++++|++++.+++.+. |++. ++.+++||+|
T Consensus 79 ~-~~~~~~~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~v 154 (397)
T 3cgv_A 79 S-EKRPIILQSEKAG---NEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMV 154 (397)
T ss_dssp T-CSSCEEEC--------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEE
T ss_pred C-CCEEEEEeccccC---CceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEE
Confidence 2 2211122221111 23456899999999998866 3789999999999999888876 7663 4558999999
Q ss_pred EecCCCchHHHhhhCCCC-Cccccee--eEEEeecCCCCCCCCCceeeee---cCCcEEEEEecCCCeEEEEEEecCCCc
Q 015303 155 IGCDGVNSIVAKWLGFKN-PAFVGRS--AIRGYSDFKGSHGFEPNFLQFF---GKGLRSGFIPCDDQTIYWFFTWTSSSQ 228 (409)
Q Consensus 155 V~AdG~~S~vr~~l~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~ 228 (409)
|+|||.+|.+|+.++... ....... ++.......... +.....++ .++++.+++|.++++..+.+....+..
T Consensus 155 V~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~ 232 (397)
T 3cgv_A 155 IAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD--PDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI 232 (397)
T ss_dssp EECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC--TTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC
T ss_pred EECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC--CCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc
Confidence 999999999999998776 3222111 122222211111 22333443 466789999999998766666554432
Q ss_pred CcccccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchh
Q 015303 229 DKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGC 308 (409)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~ 308 (409)
.......+.+.+.+... +.+ ............. |......++..+|++++|||||.++|++|+|++
T Consensus 233 -----~~~~~~~~~l~~~~~~~-~~~----~~~~~~~~~~~~~----p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~ 298 (397)
T 3cgv_A 233 -----HNRFELKNYLDRFIENH-PGL----KKGQDIQLVTGGV----SVSKVKMPITMPGLMLVGDAARLIDPITGGGIA 298 (397)
T ss_dssp -----SCHHHHHHHHHHHHHTC-HHH----HTSEEEEEEEEEE----ECCCCCSCCEETTEEECGGGGTCSCTTTCCCHH
T ss_pred -----cCCCCHHHHHHHHHHhC-cCC----CCCeEEeeeeeee----ecCCCccceeeCCEEEEEccccCCCCCCCCCHH
Confidence 11222233333333232 221 1111111111111 111123366789999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeecc
Q 015303 309 AALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQS 374 (409)
Q Consensus 309 ~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 374 (409)
+|++||..|++.|.+++... +.....|+.|++.|+++....+..+..+..++..
T Consensus 299 ~a~~~a~~la~~l~~~~~~~------------~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 3cgv_A 299 NAIVSGMYAAQVTKEAIESN------------DYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAM 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHT------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcC------------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999987643 1456889999999999888888888777766653
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.8e-36 Score=289.45 Aligned_cols=330 Identities=15% Similarity=0.089 Sum_probs=217.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcC--CcccceeccccHHHHHHHcCchhHHHh-ccccccceeeee
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLR--VTGFAFTVWTNAWKALDAVGIGNSLRQ-QHQQLRSIVATP 79 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~-~~~~~~~~~~~~ 79 (409)
+++||+||||||+|+++|+.|+++|++|+|+|+.+.+. ...++..+ +...++.+|+.+.... ......+..++.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 46899999999999999999999999999999987643 23344444 4578888887653321 112223333332
Q ss_pred cCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE-EEec---CCc--EEec
Q 015303 80 TISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLA---DGT--ILKT 151 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~---~g~--~~~a 151 (409)
.. +. ..+.++ ...+.++|..|.+.|.+.+ .+++++++++|+++..+++.+. |++. +|+ +++|
T Consensus 82 ~~-~~--~~~~~~-------~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~a 151 (453)
T 3atr_A 82 PD-MQ--TVWTVN-------GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYS 151 (453)
T ss_dssp TT-SS--CEEEEE-------EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEEC
T ss_pred CC-Cc--eEEeEC-------CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEc
Confidence 21 11 111111 1245789999999998876 4789999999999998888754 5544 665 7999
Q ss_pred cEEEecCCCchHHHhhhCCCCCc----c--cceeeEEEeecCCCCCCCCCce-eeee----cCCcEEEEEecCCCeEEEE
Q 015303 152 KVLIGCDGVNSIVAKWLGFKNPA----F--VGRSAIRGYSDFKGSHGFEPNF-LQFF----GKGLRSGFIPCDDQTIYWF 220 (409)
Q Consensus 152 d~vV~AdG~~S~vr~~l~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~p~~~~~~~~~ 220 (409)
|+||+|||.+|.+|+.++...+. + ....++...+....+.. ...+ ..++ .++++++++|.+++.+.+.
T Consensus 152 d~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg 230 (453)
T 3atr_A 152 KVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIE-DHDYLRIFIDQETSPGGYWWYFPKGKNKVNVG 230 (453)
T ss_dssp SEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCT-TTTEEEEECCTTTSTTSCEEEEEEETTEEEEE
T ss_pred CEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCcc-CCCeEEEEECCCCCCCcEEEEEECCCCeEEEE
Confidence 99999999999999998765421 1 22344454444333221 2223 3444 2566889999999877666
Q ss_pred EEecCCCcCcccccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCC
Q 015303 221 FTWTSSSQDKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMT 300 (409)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~ 300 (409)
+........ ....+.+.+.+.+....+.. .......... .|.....++|..+|++++|||||.++
T Consensus 231 ~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~----~p~~~~~~~~~~~~v~lvGDAAh~~~ 295 (453)
T 3atr_A 231 LGIQGGMGY---PSIHEYYKKYLDKYAPDVDK--------SKLLVKGGAL----VPTRRPLYTMAWNGIIVIGDSGFTVN 295 (453)
T ss_dssp EEEESSSCC---CCHHHHHHHHHHHHCTTEEE--------EEEEEEEEEE----EECSSCCSCSEETTEEECGGGGTCSC
T ss_pred EEecCCCCC---CCHHHHHHHHHHhhhhhcCC--------CeEEecccee----ccCCCCCCceecCCEEEEeCcccCCC
Confidence 655433211 11222333333221111111 0001111111 12222334677899999999999999
Q ss_pred CCcccchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeec
Q 015303 301 PDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ 373 (409)
Q Consensus 301 P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~ 373 (409)
|++|||+|+||+||..||+.|.+++..++ ...++|+.|++.|++++...+..+..+.+++.
T Consensus 296 P~~G~G~~~Ai~da~~la~~l~~~l~~~~------------~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~ 356 (453)
T 3atr_A 296 PVHGGGKGSAMISGYCAAKAILSAFETGD------------FSASGLWDMNICYVNEYGAKQASLDIFRRFLQ 356 (453)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHHTC------------CSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHcCC------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999876431 22578999999999999999888877777665
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=2.5e-35 Score=279.56 Aligned_cols=314 Identities=16% Similarity=0.145 Sum_probs=212.3
Q ss_pred CCC-cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhcccccc-ceeee
Q 015303 1 MES-VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLR-SIVAT 78 (409)
Q Consensus 1 m~~-~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-~~~~~ 78 (409)
|++ ++||+||||||+|+++|+.|+++|++|+|+|+.+.++. ..|..+++.+...++.+|+++.+...+.... +..+.
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~-~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 79 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRF-VIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFV 79 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCC-CSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC-cccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEE
Confidence 443 58999999999999999999999999999999976653 5788899999999999999988877654433 23332
Q ss_pred ecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeE--EEEecCCc--EEecc
Q 015303 79 PTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK--LLHLADGT--ILKTK 152 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v--~v~~~~g~--~~~ad 152 (409)
+. .....+.+...........+.++|..|.+.|.+.+ .+++++++++|++++.+++++ .+.+.+|+ +++||
T Consensus 80 ~~---~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~ 156 (421)
T 3nix_A 80 RG---KEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEAR 156 (421)
T ss_dssp ET---TEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEE
T ss_pred eC---CeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcC
Confidence 21 11222333222112233456899999999998866 378999999999999887764 55567887 79999
Q ss_pred EEEecCCCchHHHhhhCCCCCcc-cceeeEEEeecCCCC-CCCC-Cceeeee---cCCcEEEEEecCCCeEEEEEEecCC
Q 015303 153 VLIGCDGVNSIVAKWLGFKNPAF-VGRSAIRGYSDFKGS-HGFE-PNFLQFF---GKGLRSGFIPCDDQTIYWFFTWTSS 226 (409)
Q Consensus 153 ~vV~AdG~~S~vr~~l~~~~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~ 226 (409)
+||+|||.+|.+|+.++...+.. ....++...+..... .... .....++ .++.+++++|.++++..+.+....+
T Consensus 157 ~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~ 236 (421)
T 3nix_A 157 FIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPS 236 (421)
T ss_dssp EEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHH
T ss_pred EEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHH
Confidence 99999999999999998765543 333344443332211 1111 1222222 3567899999999887666554332
Q ss_pred CcCcccccChHHHHHHHHHHhCCCChHHHHHHHcCCCC-ceEeecccccCcccccccccCCCcEEEeccCcCCCCCCccc
Q 015303 227 SQDKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLD-SIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQ 305 (409)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~ 305 (409)
.... ...+.++....+.+ ..+.+.+.+...... .+..++... ....++..+++++||||||.++|++|+
T Consensus 237 ~~~~-~~~~~~~~l~~~~~----~~p~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~lvGDAa~~~~P~~G~ 306 (421)
T 3nix_A 237 YFDE-YTGTPEERMRAMIA----NEGHIAERFKSEEFLFEPRTIEGYA-----ISASKLYGDGFVLTGNATEFLDPIFSS 306 (421)
T ss_dssp HHTT-SCSCHHHHHHHHHH----TCTTTHHHHTTCCBSSCCEEEECCC-----BEESCSEETTEEECGGGTCBCCSTTCC
T ss_pred Hhhh-cCCCHHHHHHHHHH----hCcHHHHHHhcCccccCceeecccc-----eeeeeeccCCEEEecccccccCCcccc
Confidence 2111 12344444444443 233344445443322 222222221 123356779999999999999999999
Q ss_pred chhhhhhHHHHHHHHHHHHhhcc
Q 015303 306 GGCAALEDGIVLARCINEALKTK 328 (409)
Q Consensus 306 G~~~al~~a~~la~~l~~~~~~~ 328 (409)
|+++|++||..|++.|.+.+.+.
T Consensus 307 G~~~A~~~a~~la~~l~~~~~~~ 329 (421)
T 3nix_A 307 GATFAMESGSKGGKLAVQFLKGE 329 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999988764
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=8.4e-37 Score=285.45 Aligned_cols=334 Identities=15% Similarity=0.103 Sum_probs=211.8
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCch-hH-HHhccccccceeeeec
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIG-NS-LRQQHQQLRSIVATPT 80 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~-~~~~~~~~~~~~~~~~ 80 (409)
+||+||||||+|+++|+.|+++ |++|+|+||.+.+...++++.+++++.+.+...++. +. +...........+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3899999999999999999999 999999999988877888999998776622222333 33 333333344444443
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhCC--CceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecC
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
.+..+ . . ........+.|..|.+.|.+.+. +++++++++|++++.. .++++|+||+||
T Consensus 80 -~g~~~---~--~---~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~Ad 139 (381)
T 3c4a_A 80 -HNEPS---L--M---STGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLAN 139 (381)
T ss_dssp -SSSEE---E--C---CCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECC
T ss_pred -CCeeE---E--e---cCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECC
Confidence 22221 1 0 00123357899999999988763 6899999999887542 136899999999
Q ss_pred CCchHHHhhh----CCCCCcccceeeEEEeecCCCCCCCCCceeeeecCCcE-EEEEecCCCeEEEEEEecCCCc--Ccc
Q 015303 159 GVNSIVAKWL----GFKNPAFVGRSAIRGYSDFKGSHGFEPNFLQFFGKGLR-SGFIPCDDQTIYWFFTWTSSSQ--DKE 231 (409)
Q Consensus 159 G~~S~vr~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~--~~~ 231 (409)
|.+|. |+.+ +...........+.+..... .. ......+.+.+.. +.++|++++...+.+....+.. ...
T Consensus 140 G~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (381)
T 3c4a_A 140 GVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF--DQ-MNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARL 215 (381)
T ss_dssp GGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC--SS-EEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTS
T ss_pred CCCch-HHhhhhhcCCCcccCCccEEEEecCCCC--Cc-ceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCc
Confidence 99999 9887 33322223344444433221 11 1111112334432 2368998877544443321100 000
Q ss_pred cccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhh
Q 015303 232 LEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAAL 311 (409)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al 311 (409)
...+.+...+.+.+.+..+.+.. +++... . ..++..... ..++|..+||+|+|||||.++|++|||+|+||
T Consensus 216 ~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~---~-~~~~~~~~~----~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al 286 (381)
T 3c4a_A 216 GEMSEEASAEYVAKVFQAELGGH-GLVSQP---G-LGWRNFMTL----SHDRCHDGKLVLLGDALQSGHFSIGHGTTMAV 286 (381)
T ss_dssp SSSCHHHHHHHHHHHTHHHHTTC-CCBCCT---T-TCSEEEEEC----CCSCSEETTEEECGGGTCCCCGGGCCHHHHHH
T ss_pred ccCChHHHHHHHHHHhcccCCCc-hhhcCC---C-cceeeeccc----cCCCcccCCEEEEEccccccCCCccccHHHHH
Confidence 22355566666766654332211 111110 0 012222111 23467889999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccC-----chhHHHHHHHH
Q 015303 312 EDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSD-----GKILNFLRDKI 386 (409)
Q Consensus 312 ~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~r~~~ 386 (409)
+||..||++|... . ....+|+.|+++|++++..++..+..+..++... .+...+.|+..
T Consensus 287 ~Da~~La~~L~~~---~-------------~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~r~~~ 350 (381)
T 3c4a_A 287 VVAQLLVKALCTE---D-------------GVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFD 350 (381)
T ss_dssp HHHHHHHHHHHHS---S-------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC------CHHHHGG
T ss_pred HHHHHHHHHHhcc---c-------------cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhcCCHHHHHHHHh
Confidence 9999999999873 1 4578999999999999999999998887433221 13345566666
Q ss_pred HH
Q 015303 387 LA 388 (409)
Q Consensus 387 ~~ 388 (409)
++
T Consensus 351 ~~ 352 (381)
T 3c4a_A 351 AR 352 (381)
T ss_dssp GT
T ss_pred hc
Confidence 55
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=6.6e-32 Score=262.33 Aligned_cols=333 Identities=14% Similarity=0.080 Sum_probs=214.8
Q ss_pred CcccEEEECCChHHHHHHHHHHH------------cCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhH--HHhc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYR------------LGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNS--LRQQ 68 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~------------~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~--~~~~ 68 (409)
..+||+||||||+|+++|+.|++ .|++|+|||+.+.+.. +.+..+.|.+...|+.+|+.+. +...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~-g~g~~~~p~~~~~l~~lGi~e~~~~~~~ 84 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATI-GVGEGTWPSMRSTLSKIGIDENDFIRQC 84 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCC-CSCEECCTHHHHHHHHHTCCHHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCc-ceeeechHhHHHHHHHcCCCHHHHHHHc
Confidence 35899999999999999999999 8999999999766553 3488899999999999999885 4543
Q ss_pred ccc-ccceeeeecCC----------------CCccccccccc--------------------------------ccc--c
Q 015303 69 HQQ-LRSIVATPTIS----------------GKPSSERSLKV--------------------------------QGK--Y 97 (409)
Q Consensus 69 ~~~-~~~~~~~~~~~----------------~~~~~~~~~~~--------------------------------~~~--~ 97 (409)
... ..++.+..+.. +.......+.. .+. .
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~ 164 (526)
T 2pyx_A 85 DASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHF 164 (526)
T ss_dssp TCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCC
T ss_pred CCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCC
Confidence 322 22222221111 00000001100 000 1
Q ss_pred CCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeCCe--EEEEecCCcEEeccEEEecCCCchHH-HhhhCCC
Q 015303 98 GEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHF--KLLHLADGTILKTKVLIGCDGVNSIV-AKWLGFK 171 (409)
Q Consensus 98 ~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~v-r~~l~~~ 171 (409)
.....+.++|..|.+.|.+.+ .+++++++ +|++++.++++ +.|++.+|.+++||+||+|||.+|.+ ++.++..
T Consensus 165 ~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~ 243 (526)
T 2pyx_A 165 QNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVP 243 (526)
T ss_dssp SSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCC
T ss_pred CCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 112345789999999998765 47899999 69999886543 46778887789999999999999999 6677765
Q ss_pred CCccc----ceeeEEEeecCCCC-CCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCcccccChHHHHHHHHHH
Q 015303 172 NPAFV----GRSAIRGYSDFKGS-HGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGK 246 (409)
Q Consensus 172 ~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (409)
...+. ....+......... ..............++++++|.+++.. ..+.+.... .+.++..+.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~-~~~v~~~~~------~~~~~~~~~l~~~ 316 (526)
T 2pyx_A 244 FLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKG-VGYVYSSSH------TNDIDAQKTLFNY 316 (526)
T ss_dssp EEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEE-EEEEECTTT------CCHHHHHHHHHHH
T ss_pred cccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceE-EEEEecCCC------CChHHHHHHHHHH
Confidence 42211 11222222332211 111222222334555888999987533 233332221 1234556667777
Q ss_pred hCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhh
Q 015303 247 LHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALK 326 (409)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~ 326 (409)
+..+.+. +...+. ..++.... ...++..+|+++||||||.++|+.|+|+|+|++||..|++.|...
T Consensus 317 l~~~~~~----l~~~~~---~~~~~~~~-----~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~-- 382 (526)
T 2pyx_A 317 LGVDGAA----ADKLEP---RQLAINPG-----YRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN-- 382 (526)
T ss_dssp HTCCHHH----HHHCCC---EEEECCCE-----EESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC--
T ss_pred HHhcCcc----cccCCc---eEEecccC-----ccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc--
Confidence 7655332 222221 12222111 123456799999999999999999999999999999999888631
Q ss_pred ccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhhee
Q 015303 327 TKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSI 371 (409)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~ 371 (409)
....+.+++.|+++|+++...+.+.....+..
T Consensus 383 -------------~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 414 (526)
T 2pyx_A 383 -------------RMVMDTISARVNERYQQHWQQIIDFLKLHYVI 414 (526)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12457899999999999998887766555544
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=1.8e-31 Score=261.27 Aligned_cols=349 Identities=14% Similarity=0.049 Sum_probs=210.6
Q ss_pred cccEEEECCChHHHHHHHHHHHc------CCceEEEeCCCCcCCc-ccceeccccHHHHHHHcCchhHHHhcccccc---
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL------GIRSMVLESSESLRVT-GFAFTVWTNAWKALDAVGIGNSLRQQHQQLR--- 73 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~------g~~V~v~E~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~--- 73 (409)
++||+||||||+|+++|+.|++. |++|+|+||.+.+... .++..+.+.+++.| + +.+...+.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l---~~~~~~g~~~~~~~ 109 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--F---PDWKEKGAPLNTPV 109 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--C---TTHHHHTCCCCEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--H---HHHHhcCCceeeee
Confidence 48999999999999999999999 9999999999876542 45666777666554 2 22322222222
Q ss_pred ---ceeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCC-eEE-EEec--
Q 015303 74 ---SIVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGH-FKL-LHLA-- 144 (409)
Q Consensus 74 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~-~v~-v~~~-- 144 (409)
.+.+... .+. ..++............+.++|..|.++|.+.+ .+++|+++++|+++..+++ .+. |++.
T Consensus 110 ~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~ 186 (584)
T 2gmh_A 110 TEDRFGILTE-KYR--IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDV 186 (584)
T ss_dssp CEEEEEEECS-SCE--EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCE
T ss_pred chhheeeecc-CCC--ccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCc
Confidence 1112111 110 11110000001122356789999999998866 3789999999999988764 443 6665
Q ss_pred ----CC---------cEEeccEEEecCCCchHHHhhh----CCCCCccccee--eEEEeecCCCCCCCCCceeeeec---
Q 015303 145 ----DG---------TILKTKVLIGCDGVNSIVAKWL----GFKNPAFVGRS--AIRGYSDFKGSHGFEPNFLQFFG--- 202 (409)
Q Consensus 145 ----~g---------~~~~ad~vV~AdG~~S~vr~~l----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--- 202 (409)
+| .+++||+||+|||.+|.+|+.+ +......+... .+......+..........++++
T Consensus 187 g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~ 266 (584)
T 2gmh_A 187 GIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 266 (584)
T ss_dssp EECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTS
T ss_pred cccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccc
Confidence 33 5799999999999999999886 54432211111 11222222221111112222221
Q ss_pred ---CCcEEEEEecC--CCeEEEEEEecCCCcCcccccChHHHHHHHHHHhCCCChHHHHHHHcCCCCceEeecccccCcc
Q 015303 203 ---KGLRSGFIPCD--DQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQ 277 (409)
Q Consensus 203 ---~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (409)
.....+++|.. ++.+.+.+....+.... ..++ .+.+.+.. . .+.+.++++....... ......+.
T Consensus 267 ~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~---~~~l~~~~-~-~p~i~~~l~~~~~~~~---~~~~~~~~ 336 (584)
T 2gmh_A 267 DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNP--YLSP---FREFQRWK-H-HPSIKPTLEGGKRIAY---GARALNEG 336 (584)
T ss_dssp CTTSCEEEEEEECCSSSCEEEEEEEEETTCCCT--TCCH---HHHHHHHT-T-STTTHHHHTTCEEEEE---EEEEEECC
T ss_pred cCCcCCceEEEEecCCCCeEEEEEEEecCcccc--cCCh---HHHHHHHH-h-ChHHHHHhCCCeEEEe---cceEccCC
Confidence 11234567887 67776666554432211 1122 23343332 2 3455666654321111 11111111
Q ss_pred c-ccccccCCCcEEEeccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHH---HHHHHHh
Q 015303 278 E-VLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMG---LKRYAKE 353 (409)
Q Consensus 278 ~-~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~---l~~Y~~~ 353 (409)
. ...++|..+|++|||||||.++|+.|||+|+||+||..||+.|.++++.++. ...++ |+.|+++
T Consensus 337 ~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~-----------~~~~a~~~L~~Ye~~ 405 (584)
T 2gmh_A 337 GFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENL-----------QSKTIGLHVTEYEDN 405 (584)
T ss_dssp GGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCC-----------CCSSSSCCCTHHHHH
T ss_pred CcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCc-----------chhhhhhhHHHHHHH
Confidence 1 1234677899999999999999999999999999999999999998764210 11343 8999999
Q ss_pred hhhh-HHHHHHHHHHhheeeccC-chhHHH
Q 015303 354 RRWR-CFELISIAYLVGSIQQSD-GKILNF 381 (409)
Q Consensus 354 r~~~-~~~~~~~s~~~~~~~~~~-~~~~~~ 381 (409)
|+++ +...+..++.+..++... ..+..+
T Consensus 406 r~~~~v~~~l~~~r~~~~~~~~~~g~~~~~ 435 (584)
T 2gmh_A 406 LKNSWVWKELYSVRNIRPSCHGILGVYGGM 435 (584)
T ss_dssp HHTSHHHHHHHHTTTTTGGGGSTTTHHHHH
T ss_pred HHHhHHHHHHHHHhChhHHHHHhhccHHHH
Confidence 9987 677777887777776543 333333
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=100.00 E-value=5.2e-31 Score=255.73 Aligned_cols=328 Identities=11% Similarity=-0.002 Sum_probs=205.7
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhH--HHhccccc-cceeee
Q 015303 5 EDIVIVGAGIAGLTTSLGLYR---LGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNS--LRQQHQQL-RSIVAT 78 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~--~~~~~~~~-~~~~~~ 78 (409)
+||+|||||++|+++|+.|++ .|++|+|+|+.+.+. .+.+..+.+....+++.+|+.+. +....... .++.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~-~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~~ 81 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRR-IGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRFE 81 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCc-eeeccccCcchHHHHHHcCCCHHHHHHHcCCeEeccceec
Confidence 699999999999999999999 999999999986543 44577788888999999998874 44332211 111111
Q ss_pred ecCC---------CCcc--ccc--------------c---------------c-------ccc----c---------ccC
Q 015303 79 PTIS---------GKPS--SER--------------S---------------L-------KVQ----G---------KYG 98 (409)
Q Consensus 79 ~~~~---------~~~~--~~~--------------~---------------~-------~~~----~---------~~~ 98 (409)
.+.. +... ... . + ... + ...
T Consensus 82 ~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 161 (511)
T 2weu_A 82 NWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQR 161 (511)
T ss_dssp SSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGCC
T ss_pred CCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccCc
Confidence 1100 0000 000 0 0 000 0 000
Q ss_pred --CccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCe--EEEEecCCcEEeccEEEecCCCchHHH-hhhCCC
Q 015303 99 --EHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF--KLLHLADGTILKTKVLIGCDGVNSIVA-KWLGFK 171 (409)
Q Consensus 99 --~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~vr-~~l~~~ 171 (409)
....+.++|..|.+.|.+.+ .+++++++ +|+++..++++ +.|++.+|++++||+||+|||.+|.++ +.++..
T Consensus 162 ~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~ 240 (511)
T 2weu_A 162 AQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGR 240 (511)
T ss_dssp SCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred CCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 22346789999999998865 47899999 99999886544 678888888899999999999999995 455654
Q ss_pred CCc----ccceeeEEEeecCCCCCCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCcccccChHHHHHHHHHHh
Q 015303 172 NPA----FVGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKL 247 (409)
Q Consensus 172 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (409)
... ......+........+............++++++++|.++ +..+.+.+... ..+.++..+.+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~------~~~~~~~~~~l~~~~ 313 (511)
T 2weu_A 241 FQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSDE------FISPEEAERELRSTV 313 (511)
T ss_dssp EEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEECTT------TSCHHHHHHHHHHHH
T ss_pred CccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEECCC------CCCHHHHHHHHHHHh
Confidence 321 1111222222222221111222233345556889999987 34333333321 223455556666655
Q ss_pred CCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhc
Q 015303 248 HDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 327 (409)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~ 327 (409)
... +.+ ......+... ...+++..+|+++||||||.++|+.|+|+++|++||..|++.|.. +
T Consensus 314 ~~~-~~~---------~~~~~~~~~~-----~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~---~ 375 (511)
T 2weu_A 314 APG-RDD---------LEANHIQMRI-----GRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG---E 375 (511)
T ss_dssp CTT-CTT---------SCCEEEECCC-----EEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC---T
T ss_pred Ccc-ccc---------ccceeEEeec-----cccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc---C
Confidence 321 110 1111111111 112244568999999999999999999999999999999998864 1
Q ss_pred cCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheee
Q 015303 328 KQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQ 372 (409)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~ 372 (409)
. ..+.+|+.|++.|+++...+.+.....+.+.
T Consensus 376 ~-------------~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~ 407 (511)
T 2weu_A 376 R-------------WDPVLISAYNERMAHMVDGVKEFLVLHYKGA 407 (511)
T ss_dssp T-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred C-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 1 3467899999999999988887766655544
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.98 E-value=8.7e-31 Score=255.31 Aligned_cols=328 Identities=15% Similarity=0.064 Sum_probs=206.9
Q ss_pred CCcccEEEECCChHHHHHHHHHHH---cCCceEEEeCCCCcCCcccceeccccHHH-HHHHcCchhH--HHhcccccc-c
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYR---LGIRSMVLESSESLRVTGFAFTVWTNAWK-ALDAVGIGNS--LRQQHQQLR-S 74 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~~~~~~~~~-~l~~~gl~~~--~~~~~~~~~-~ 74 (409)
++.+||+|||||++|+++|+.|++ .|++|+|||+...+.. +.+..+.+.+.. +++.+|+.+. +........ +
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~-~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g 81 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRI-GVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAA 81 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCC-CSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCc-CCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCC
Confidence 446899999999999999999999 9999999999765443 347778888888 9999998754 333222111 1
Q ss_pred eeeeecC--------------CCCcc--ccccc-----c------ccc-----------------------ccCCcccee
Q 015303 75 IVATPTI--------------SGKPS--SERSL-----K------VQG-----------------------KYGEHEMRC 104 (409)
Q Consensus 75 ~~~~~~~--------------~~~~~--~~~~~-----~------~~~-----------------------~~~~~~~~~ 104 (409)
+.+..+. .+... ....+ . ..+ .......+.
T Consensus 82 ~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 161 (538)
T 2aqj_A 82 IKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWH 161 (538)
T ss_dssp EEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEE
T ss_pred ccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEE
Confidence 1111110 01000 00000 0 000 000123467
Q ss_pred ccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCe--EEEEecCCcEEeccEEEecCCCchHHHh-hhCCCCCccc---
Q 015303 105 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF--KLLHLADGTILKTKVLIGCDGVNSIVAK-WLGFKNPAFV--- 176 (409)
Q Consensus 105 i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~vr~-~l~~~~~~~~--- 176 (409)
++|..|.+.|.+.+ .+++++++ +|+++..++++ +.|++.+|++++||+||+|||.+|.+|+ .++.....+.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~ 240 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYL 240 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTC
T ss_pred EeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcccccccc
Confidence 89999999998866 47899999 89999886543 5788888888999999999999999954 4565432211
Q ss_pred -ceeeEEEeecCCCC-CCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCcccccChHHHHHHHHHHhCCCChHH
Q 015303 177 -GRSAIRGYSDFKGS-HGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLPAQV 254 (409)
Q Consensus 177 -~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (409)
...++........+ ............+.++++++|.++.. .+.+.+... ..+.++..+.+.+.+...+ +
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~-~~g~v~~~~------~~~~~~~~~~l~~~~~~~~--~ 311 (538)
T 2aqj_A 241 LCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGRF-GSGYVFSSH------FTSRDQATADFLKLWGLSD--N 311 (538)
T ss_dssp CCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTEE-EEEEEECTT------TSCHHHHHHHHHHHHTCCT--T
T ss_pred ccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCce-EEEEEEcCC------CCChHHHHHHHHHHhcCCC--C
Confidence 11222222222111 00111222234555688999998853 233333221 1234555666666664321 1
Q ss_pred HHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhccCCCCCC
Q 015303 255 KAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEE 334 (409)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~ 334 (409)
.....++.... ...++..+|+++||||||.++|+.|+|+|+|++||..|++.|.. +
T Consensus 312 ---------~~~~~~~~~~~-----~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~---~------- 367 (538)
T 2aqj_A 312 ---------QPLNQIKFRVG-----RNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD---T------- 367 (538)
T ss_dssp ---------CCCEEEECCCE-----EESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB---T-------
T ss_pred ---------CCceEEeeccc-----cccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc---c-------
Confidence 11112222111 12345679999999999999999999999999999999987752 1
Q ss_pred chhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhhe
Q 015303 335 DEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGS 370 (409)
Q Consensus 335 ~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~ 370 (409)
+..+.+|+.|++.|+++...+.......+.
T Consensus 368 ------~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 397 (538)
T 2aqj_A 368 ------SFDPRLSDAFNAEIVHMFDDCRDFVQAHYF 397 (538)
T ss_dssp ------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 134678999999999998887765554443
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.98 E-value=2.2e-30 Score=252.72 Aligned_cols=331 Identities=13% Similarity=0.070 Sum_probs=211.0
Q ss_pred CcccEEEECCChHHHHHHHHHHH---cCCceEEEeCCCCcCCcccceeccccHHH-HHHHcCchhH--HHhccccc-cce
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYR---LGIRSMVLESSESLRVTGFAFTVWTNAWK-ALDAVGIGNS--LRQQHQQL-RSI 75 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~~~~~~~~~-~l~~~gl~~~--~~~~~~~~-~~~ 75 (409)
..+||+||||||+|+++|+.|++ .|++|+|||+.+.+.. +.+..+.|.+.. +++.+|+.+. +....... .++
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~-~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~ 102 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTL-GVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAI 102 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCC-CCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCcc-ceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEee
Confidence 46899999999999999999999 9999999999765443 356788888888 9999999865 44332222 222
Q ss_pred eeeecCCC--------------Ccc-ccc--------------------------c----------cccccc-----c--
Q 015303 76 VATPTISG--------------KPS-SER--------------------------S----------LKVQGK-----Y-- 97 (409)
Q Consensus 76 ~~~~~~~~--------------~~~-~~~--------------------------~----------~~~~~~-----~-- 97 (409)
.+..+... ... ..+ . +..... .
T Consensus 103 ~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (550)
T 2e4g_A 103 KFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGS 182 (550)
T ss_dssp EEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSC
T ss_pred eEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCC
Confidence 22111110 000 000 0 000000 0
Q ss_pred -CCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeCCe--EEEEecCCcEEeccEEEecCCCchHH-HhhhCC
Q 015303 98 -GEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHF--KLLHLADGTILKTKVLIGCDGVNSIV-AKWLGF 170 (409)
Q Consensus 98 -~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~v-r~~l~~ 170 (409)
.....+.+++..|.+.|.+.+ ++++++++ +|+++..++++ +.|++.+|.+++||+||+|||.+|.+ ++.++.
T Consensus 183 ~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~ 261 (550)
T 2e4g_A 183 KVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEE 261 (550)
T ss_dssp BCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred CCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCC
Confidence 012345789999999998876 38899999 99999876544 67888888889999999999999999 556666
Q ss_pred CCCccc----ceeeEEEeecCCCCC-CCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCcccccChHHHHHHHHH
Q 015303 171 KNPAFV----GRSAIRGYSDFKGSH-GFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLG 245 (409)
Q Consensus 171 ~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (409)
....+. ....+........+. ...........++++++++|.++. ....+.+... ..+.++..+.+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~~------~~~~~~~~~~l~~ 334 (550)
T 2e4g_A 262 PFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSSR------FATEDEAVREFCE 334 (550)
T ss_dssp CEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEECTT------TSCHHHHHHHHHH
T ss_pred CcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEecC------CCChHHHHHHHHH
Confidence 432111 111222222222110 011222233345668889998873 3333333221 1234455666666
Q ss_pred HhCCCChHHHHHHHcCCCCceEeecccccCcccccccccCCCcEEEeccCcCCCCCCcccchhhhhhHHHHHHHHHHHHh
Q 015303 246 KLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEAL 325 (409)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~ 325 (409)
.+...+ .+ ......+... ...+++..+|+++||||||.++|++|||+++|++||..|++.|..
T Consensus 335 ~~~~~p-~l---------~~~~~i~~~~-----~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~-- 397 (550)
T 2e4g_A 335 MWHLDP-ET---------QPLNRIRFRV-----GRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD-- 397 (550)
T ss_dssp HTTCCT-TT---------SCCEEEECCC-----EEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC--
T ss_pred hhCcCc-cc---------CCCceEEecC-----CCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc--
Confidence 654321 11 1111111111 112234568999999999999999999999999999999988753
Q ss_pred hccCCCCCCchhhhhhhHHHHHHHHHHhhhhhHHHHHHHHHHhheeec
Q 015303 326 KTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ 373 (409)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~ 373 (409)
+ +..+.+|+.|+++|+++...+.+.....+.+..
T Consensus 398 -~-------------~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~~ 431 (550)
T 2e4g_A 398 -K-------------SLNPVLTARFNREIETMFDDTRDFIQAHFYFSP 431 (550)
T ss_dssp -T-------------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred -c-------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1 134689999999999999988887776666543
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.96 E-value=7.8e-29 Score=234.69 Aligned_cols=327 Identities=17% Similarity=0.116 Sum_probs=190.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCc-c---cceeccccHHHHHHHcCchhHHHhccccccceeeee
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVT-G---FAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATP 79 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~-~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 79 (409)
++||+||||||+|+++|+.|+++|++|+|+|+++.+... + ........++..++.+|+.. +...........+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~ 100 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNE-WPSEEFGYFGHYYYV 100 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCC-SCHHHHCEEEEEEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhh-hhhhcccccceeEEE
Confidence 479999999999999999999999999999998743221 1 12233445667777776421 111122233333332
Q ss_pred cCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCC-eEEEEEEeCCeEEEEecCCcEEeccEEEe
Q 015303 80 TISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSS-QVVSIEESGHFKLLHLADGTILKTKVLIG 156 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~-~v~~i~~~~~~v~v~~~~g~~~~ad~vV~ 156 (409)
.... ...+... .......+.+..+...|.+.+ .++++++.. .+.+++ ....++|+||+
T Consensus 101 ~~~~----~~~~~~~---~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~ad~VV~ 161 (430)
T 3ihm_A 101 GGPQ----PMRFYGD---LKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQYDLLVV 161 (430)
T ss_dssp CSSS----CEEEEEE---EEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTTSSEEEE
T ss_pred CCCC----ccccchh---cCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhcccCCEEEE
Confidence 2111 1122110 012234678888888887765 366776522 111110 00126899999
Q ss_pred cCCCchHHHhhhCCC-C-C-cccceeeEEEeec-CCCCCCCCCceeeeecCCcEEEEEec--CCCeEEEEEEecCCCcCc
Q 015303 157 CDGVNSIVAKWLGFK-N-P-AFVGRSAIRGYSD-FKGSHGFEPNFLQFFGKGLRSGFIPC--DDQTIYWFFTWTSSSQDK 230 (409)
Q Consensus 157 AdG~~S~vr~~l~~~-~-~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~ 230 (409)
|||.+|.++...... . + ..+......++.. ...+......+..+.+.+ .++++|. .++...+++.+..+....
T Consensus 162 AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G-~~~~~p~~~~~g~~~~~~~~~~~~~~~ 240 (430)
T 3ihm_A 162 CTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHG-ELIEIPTLSFNGMSTALVLENHIGSDL 240 (430)
T ss_dssp CCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTE-EEEEEEEEETTEEEEEEEEEECTTSSS
T ss_pred CCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCc-ceEEecccCCCcceEEEEEEecCCCcH
Confidence 999999887443211 1 1 1111222222222 222111122233333334 5666775 334444555554443221
Q ss_pred c--cc----cChHHHHHHHHHHhCCCChHHHHHHHcCC------CCceEeecccccCcccccccccCCCcEEE-eccCcC
Q 015303 231 E--LE----DHSAELKQFVLGKLHDLPAQVKAVIEKTP------LDSIISSRLQYRQPQEVLWGNISRGSVCV-AGDALH 297 (409)
Q Consensus 231 ~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~l-vGDAA~ 297 (409)
. .. .++++..+.+++.+..+.+.+.+++.... ...+... .+.+.......+|..+++++ +|||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~ll~GDAah 318 (430)
T 3ihm_A 241 EVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQG--GVVPAFRDGHATLNNGKTIIGLGDIQA 318 (430)
T ss_dssp GGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEE--CCCCEEBCSEEECTTSCEEEECGGGTE
T ss_pred HHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeec--ceeecccccccccCCCCEEEEecCccc
Confidence 1 11 36777778888888877777776665543 1111110 11111112234678889888 999999
Q ss_pred CCCCCcccchhhhhhHHHHHHHHHHHHhhccCCCCCCchhhhhhhHHHHHHHHHHhhh-hhHHHHHHHHHHhh
Q 015303 298 PMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERR-WRCFELISIAYLVG 369 (409)
Q Consensus 298 ~~~P~~g~G~~~al~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~r~-~~~~~~~~~s~~~~ 369 (409)
.++|++|||+|+||+||..|++.|.+. . ...++|..|+.+|+ .++....+.++.+.
T Consensus 319 ~~~p~~g~G~~~a~~da~~l~~~l~~~---~-------------~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 375 (430)
T 3ihm_A 319 TVDPVLGQGANMASYAAWILGEEILAH---S-------------VYDLRFSEHLERRRQDRVLCATRWTNFTL 375 (430)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHHHHHHC---S-------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCchhhhHHHHHHHHHHHHHHHHhc---C-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999874 1 34688999998888 66666666665543
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.92 E-value=7e-25 Score=210.79 Aligned_cols=139 Identities=18% Similarity=0.219 Sum_probs=104.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
..+||+||||||+|+++|+.|++.|++|+|+|+.+.+... ....+.+.+.+.++.+|+++.... + ..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-~~~~~~~~~~~~l~~~g~~~~~~~---------~---~~ 157 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-NVLHLWPFTIHDLRALGAKKFYGR---------F---CT 157 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-CEEECCHHHHHHHHTTTHHHHCTT---------T---TC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-CcccCChhHHHHHHHcCCcccccc---------c---cc
Confidence 3579999999999999999999999999999998765432 445677778888888887532100 0 00
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEe---CCeEEEEe--c-CC--cEEecc
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEES---GHFKLLHL--A-DG--TILKTK 152 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~---~~~v~v~~--~-~g--~~~~ad 152 (409)
.....+.+..+.+.|.+.+ .+++++++++|++++.+ ++.+.|++ . +| .++++|
T Consensus 158 -----------------~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad 220 (497)
T 2bry_A 158 -----------------GTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFD 220 (497)
T ss_dssp -----------------TTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBS
T ss_pred -----------------cccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcC
Confidence 0112456777777777655 47899999999999874 34577776 3 55 468999
Q ss_pred EEEecCCCchHHHhhhCCC
Q 015303 153 VLIGCDGVNSIVAKWLGFK 171 (409)
Q Consensus 153 ~vV~AdG~~S~vr~~l~~~ 171 (409)
+||+|||.+|.+|+..+..
T Consensus 221 ~VV~A~G~~S~~r~~~~~~ 239 (497)
T 2bry_A 221 VLISAAGGKFVPEGFTIRE 239 (497)
T ss_dssp EEEECCCTTCCCTTCEEEE
T ss_pred EEEECCCCCcccccccchh
Confidence 9999999999998766543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.88 E-value=7e-21 Score=174.61 Aligned_cols=296 Identities=15% Similarity=0.091 Sum_probs=158.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCccc------------ceeccc---cHHHHHHHcCchhHHHhc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGF------------AFTVWT---NAWKALDAVGIGNSLRQQ 68 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~------------~~~~~~---~~~~~l~~~gl~~~~~~~ 68 (409)
++||+||||||+|+++|+.|++.|++|+|+||.+.+..... ...+.. ...+.++.+. .. ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 77 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQ---AQ-GH 77 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHH---HH-TS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHH---hC-CC
Confidence 37999999999999999999999999999999875421111 011111 1222222221 10 00
Q ss_pred cccccceeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcE
Q 015303 69 HQQLRSIVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTI 148 (409)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~ 148 (409)
...+....... ..+. +... ...............+.+.|.+ +++|+++++|++++.++++|+|++.+|+.
T Consensus 78 ~~~~~~~~~~~-~~~~----~~~~--~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~~~v~~~~g~~ 147 (336)
T 1yvv_A 78 VAEWTPLLYNF-HAGR----LSPS--PDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGEEHWNLLDAEGQN 147 (336)
T ss_dssp EEEECCCEEEE-SSSB----CCCC--CTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECSSCEEEEETTSCE
T ss_pred eeeccccceec-cCcc----cccC--CCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeCCEEEEEeCCCcC
Confidence 01111111111 1110 0000 0000000111123445555544 77999999999999999999999999986
Q ss_pred Ee-ccEEEecCCCchHHHhhhCCC-------CCcccceeeEEEeecCCCCCCCCCceeeeecCCcEEEEE-----ecCCC
Q 015303 149 LK-TKVLIGCDGVNSIVAKWLGFK-------NPAFVGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFI-----PCDDQ 215 (409)
Q Consensus 149 ~~-ad~vV~AdG~~S~vr~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~ 215 (409)
.. ||+||+|+|.+|.+|.....+ ...+. .++...+.+..+... .....+...+...+++ |..++
T Consensus 148 ~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~p~~~~ 224 (336)
T 1yvv_A 148 HGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMD--PTWAVALAFETPLQT-PMQGCFVQDSPLDWLARNRSKPERDD 224 (336)
T ss_dssp EEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEE--EEEEEEEEESSCCSC-CCCEEEECSSSEEEEEEGGGSTTCCC
T ss_pred ccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCcc--ceeEEEEEecCCCCC-CCCeEEeCCCceeEEEecCcCCCCCC
Confidence 64 999999999999988653221 11122 333333333333321 1223344444433332 43333
Q ss_pred e-EEEEEEecCCCcCcccccChHHHHHHHHHHhCCC-ChHHHHHHHcCCCCceEeecccccCcccc-cccc--cCCCcEE
Q 015303 216 T-IYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDL-PAQVKAVIEKTPLDSIISSRLQYRQPQEV-LWGN--ISRGSVC 290 (409)
Q Consensus 216 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~v~ 290 (409)
. ..|++....+........+.+++.+.+++.+... +... ..........|... .|... .... ...+|++
T Consensus 225 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~----~~p~~~~~~rw~~a--~~~~~~~~~~~~~~~~rl~ 298 (336)
T 1yvv_A 225 TLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTM----PAPVFSLAHRWLYA--RPAGAHEWGALSDADLGIY 298 (336)
T ss_dssp SSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCC----CCCSEEEEEEEEEE--EESSCCCCSCEEETTTTEE
T ss_pred CCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCC----CCCcEEEccccCcc--CCCCCCCCCeeecCCCCEE
Confidence 3 3344443322222224556677777777766532 2110 00000111222211 11100 0001 1348999
Q ss_pred EeccCcCCCCCCcccchhhhhhHHHHHHHHHHHHhhcc
Q 015303 291 VAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTK 328 (409)
Q Consensus 291 lvGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~~~~ 328 (409)
++|||+|. .|++.|+.++..||+.|.+.+...
T Consensus 299 laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~~ 330 (336)
T 1yvv_A 299 VCGDWCLS------GRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp ECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred EEecCCCC------CCHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999964 499999999999999999988764
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.72 E-value=5.1e-17 Score=151.56 Aligned_cols=194 Identities=12% Similarity=0.034 Sum_probs=109.5
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH-HHhhhCCCCCcccceee
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI-VAKWLGFKNPAFVGRSA 180 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~-vr~~l~~~~~~~~~~~~ 180 (409)
.++...+.+.|.+.+ .+++++++++|++++.+++++.|++.++ +++||.||.|+|.+|. +.+.++...+.......
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g~ 238 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGE 238 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCceeccceE
Confidence 566777888777755 3789999999999998888888888777 7999999999999987 77777654332221111
Q ss_pred EEEeecCCCCCCCCCceeeeecCCcEEEEEecCCCeEEEEEEecCCCcCcccccChHHHHHHHHHHhCCCChHHHHHHHc
Q 015303 181 IRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLPAQVKAVIEK 260 (409)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (409)
...+..... ... . .++.. ..++.|..++.+.+..+...... ......+..+.+++.+..+.+.+. .
T Consensus 239 -~~~~~~~~~-~~~-~--~~~~~--~~~~~p~~~g~~~vG~~~~~~~~---~~~~~~~~~~~l~~~~~~~~p~l~----~ 304 (382)
T 1ryi_A 239 -CLSVWNDDI-PLT-K--TLYHD--HCYIVPRKSGRLVVGATMKPGDW---SETPDLGGLESVMKKAKTMLPAIQ----N 304 (382)
T ss_dssp -EEEEECCSS-CCC-S--EEEET--TEEEEECTTSEEEEECCCEETCC---CCSCCHHHHHHHHHHHHHHCGGGG----G
T ss_pred -EEEECCCCC-Ccc-c--eEEcC--CEEEEEcCCCeEEEeecccccCC---CCCCCHHHHHHHHHHHHHhCCCcC----C
Confidence 111221111 111 1 22333 25678887775433222111111 111222233444444332222211 1
Q ss_pred CCCCceEeecccccCcccccccccCCCcEEEeccCc-----CCCCCCcccchhhhhhHHHHHHHHHHH
Q 015303 261 TPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDAL-----HPMTPDIGQGGCAALEDGIVLARCINE 323 (409)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA-----~~~~P~~g~G~~~al~~a~~la~~l~~ 323 (409)
. .....|... . .+..++..++|++. ....++.|.|+..|...|..+|+.|..
T Consensus 305 ~--~~~~~w~g~--~-------~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 305 M--KVDRFWAGL--R-------PGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp S--EEEEEEEEE--E-------EECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred C--ceeeEEEEe--c-------ccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 1 111111110 0 12345667778753 335678899999999999888888754
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.70 E-value=1.9e-15 Score=140.94 Aligned_cols=67 Identities=12% Similarity=0.097 Sum_probs=54.6
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE-EEecCCcEEeccEEEecCCCch-HHHhhhCCC
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNS-IVAKWLGFK 171 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG~~S-~vr~~l~~~ 171 (409)
.++...+.+.|.+.+ .+++++++++|++++.+++.+. |++.+| +++||.||.|+|.+| .+.+.++..
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIK 215 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCC
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCC
Confidence 466777777777655 4789999999999998888877 888777 799999999999998 466777755
No 33
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.68 E-value=2.1e-15 Score=140.54 Aligned_cols=68 Identities=13% Similarity=0.195 Sum_probs=56.6
Q ss_pred eeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH-HHhhhCCC
Q 015303 103 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI-VAKWLGFK 171 (409)
Q Consensus 103 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~-vr~~l~~~ 171 (409)
..++...+...|.+.+ .+++++++++|+++..+++++.|++.+| +++||.||.|+|.+|. +.+.++..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3567778888877765 4789999999999999988899998887 7999999999999984 56667764
No 34
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.68 E-value=3.9e-15 Score=139.90 Aligned_cols=70 Identities=14% Similarity=0.177 Sum_probs=54.5
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCe-EEEEecCCcEEeccEEEecCCCch-HHHhhhCCCCCc
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNS-IVAKWLGFKNPA 174 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S-~vr~~l~~~~~~ 174 (409)
.++...+.+.|.+.+ .+++++++++|+++..+++. +.|++.+| +++||.||.|+|.+| .+++.++...+.
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~ 243 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPI 243 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCc
Confidence 345566777666654 47899999999999887665 56777777 699999999999998 678877766543
No 35
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.68 E-value=1.8e-14 Score=135.04 Aligned_cols=172 Identities=16% Similarity=0.104 Sum_probs=98.2
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccc---ee-c----ccc--HHHHHHHcCchhHHHhc-c
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFA---FT-V----WTN--AWKALDAVGIGNSLRQQ-H 69 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~---~~-~----~~~--~~~~l~~~gl~~~~~~~-~ 69 (409)
|+.++||+|||||++|+++|+.|+++|++|+|+||...+...+.+ .. + ... .....+.+.+++.+.+. +
T Consensus 1 M~~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (397)
T 2oln_A 1 MTESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCE 80 (397)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhC
Confidence 666789999999999999999999999999999998765421211 11 1 000 00111222223333211 1
Q ss_pred cc---ccceeeeecCCC------------------Ccccccc-------ccccccc------CCccceeccHHHHHHHHH
Q 015303 70 QQ---LRSIVATPTISG------------------KPSSERS-------LKVQGKY------GEHEMRCVRRKLLLETLA 115 (409)
Q Consensus 70 ~~---~~~~~~~~~~~~------------------~~~~~~~-------~~~~~~~------~~~~~~~i~r~~l~~~L~ 115 (409)
.. ..+......... .....++ ++..... ..+....++...+.+.|.
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 160 (397)
T 2oln_A 81 RRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALF 160 (397)
T ss_dssp CCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHH
T ss_pred ccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHH
Confidence 00 011111110000 0000000 0000000 001122456667777776
Q ss_pred hhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch-HHHhhhCCCCC
Q 015303 116 KEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS-IVAKWLGFKNP 173 (409)
Q Consensus 116 ~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S-~vr~~l~~~~~ 173 (409)
+.+ .+++++++++|++++.+++++.|++.++ +++||.||+|+|.+| .+++.++...+
T Consensus 161 ~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~p 220 (397)
T 2oln_A 161 TLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGARLA 220 (397)
T ss_dssp HHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCCCC
T ss_pred HHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCCCC
Confidence 654 4789999999999999888888887665 699999999999994 56777775444
No 36
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.67 E-value=2e-15 Score=139.94 Aligned_cols=68 Identities=15% Similarity=0.232 Sum_probs=55.5
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCe-EEEEecCCc--EEeccEEEecCCCch-HHHhhh-CCC
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLADGT--ILKTKVLIGCDGVNS-IVAKWL-GFK 171 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~--~~~ad~vV~AdG~~S-~vr~~l-~~~ 171 (409)
.++...+.+.|.+.+ .+++++++++|++++.++++ +.|++.+|+ +++||.||.|+|.+| .+.+.+ +.+
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 466777888777655 47999999999999988765 888888883 799999999999998 456666 765
No 37
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.67 E-value=2.2e-15 Score=143.11 Aligned_cols=61 Identities=18% Similarity=0.137 Sum_probs=51.9
Q ss_pred eeccHHHHHHHHHhhC--CCceEEeCC---eEEEEEEeCCeEE-EEecCCcEEeccEEEecCCCchH
Q 015303 103 RCVRRKLLLETLAKEL--PSGTIRYSS---QVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 103 ~~i~r~~l~~~L~~~~--~~~~i~~~~---~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
..++...+.+.|.+.+ .+++|++++ +|++|..++++++ |++.+|++++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 3556667777777655 479999999 9999999888888 99999988999999999999985
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.67 E-value=2.5e-15 Score=150.11 Aligned_cols=61 Identities=15% Similarity=0.110 Sum_probs=52.8
Q ss_pred eeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 103 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 103 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
..++...+...|.+.+ .+++|+++++|+++..++++|.|++.+|.+++||.||.|+|.+|.
T Consensus 412 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred eeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 3566778888887755 479999999999999999999999988888999999999999986
No 39
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.67 E-value=3e-15 Score=133.60 Aligned_cols=36 Identities=31% Similarity=0.491 Sum_probs=34.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+|||||||||+||+.|+++|++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 489999999999999999999999999999998775
No 40
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.66 E-value=2.2e-14 Score=133.93 Aligned_cols=166 Identities=13% Similarity=0.126 Sum_probs=95.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccc---e-ecc------ccHHH-HHHHcCchhHHHhc-cc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFA---F-TVW------TNAWK-ALDAVGIGNSLRQQ-HQ 70 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~---~-~~~------~~~~~-~l~~~gl~~~~~~~-~~ 70 (409)
+++||+|||||++|+++|+.|+++|++|+|+|+.......+.+ . .+. +...+ ..+.+.+++.+.+. +.
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 3589999999999999999999999999999998754311111 0 010 01111 11122223333221 10
Q ss_pred ---cccceeeeecC-C--------------CCcccccc-------ccccccc------CCccceeccHHHHHHHHHhhC-
Q 015303 71 ---QLRSIVATPTI-S--------------GKPSSERS-------LKVQGKY------GEHEMRCVRRKLLLETLAKEL- 118 (409)
Q Consensus 71 ---~~~~~~~~~~~-~--------------~~~~~~~~-------~~~~~~~------~~~~~~~i~r~~l~~~L~~~~- 118 (409)
...+....... . +.....+. ++..... .......++...+.+.|.+.+
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 01111111110 0 00000000 0000000 011123456677777777755
Q ss_pred -CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH-HHhhhC
Q 015303 119 -PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI-VAKWLG 169 (409)
Q Consensus 119 -~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~-vr~~l~ 169 (409)
.+++++++++|++++.+++++.|++.++ +++||.||.|+|.+|. +...++
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 162 ARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp HTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT
T ss_pred HCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc
Confidence 3789999999999998887888888766 6999999999999975 444455
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.65 E-value=2.5e-15 Score=150.33 Aligned_cols=60 Identities=12% Similarity=0.027 Sum_probs=50.8
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCc-EEeccEEEecCCCchH
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGT-ILKTKVLIGCDGVNSI 163 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~-~~~ad~vV~AdG~~S~ 163 (409)
.++...+.+.|.+.+ .+++|+++++|+++..++++|.|++.+|. +++||.||.|+|.+|.
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 456677888777654 47899999999999998888999998887 7999999999999975
No 42
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.62 E-value=1.2e-13 Score=133.04 Aligned_cols=212 Identities=10% Similarity=-0.028 Sum_probs=107.0
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEec---CCc--EEeccEEEecCCCchH-HHhh-hCCCC-C
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLA---DGT--ILKTKVLIGCDGVNSI-VAKW-LGFKN-P 173 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~---~g~--~~~ad~vV~AdG~~S~-vr~~-l~~~~-~ 173 (409)
.++...+...|.+.+ .+++++++++|+++..+++.+.|++. +|+ +++||.||.|+|.+|. +++. ++... .
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~ 224 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPY 224 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSS
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCccc
Confidence 467888888887765 47899999999999988876777773 565 7999999999999986 4443 54321 1
Q ss_pred cccceeeEEEeecCCCCCCCCCceeeee--cCCcEEEEEecCCCeEEEEEEecCCC-cCcccccChHHHHHHHHHHhCCC
Q 015303 174 AFVGRSAIRGYSDFKGSHGFEPNFLQFF--GKGLRSGFIPCDDQTIYWFFTWTSSS-QDKELEDHSAELKQFVLGKLHDL 250 (409)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 250 (409)
...+.......+. .... .....++ .++..++++|..++......+..... .......+.+ ..+.+++.+..+
T Consensus 225 ~i~p~rG~~~~~~--~~~~--~~~~~~~~~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 299 (501)
T 2qcu_A 225 GIRLIKGSHIVVP--RVHT--QKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEES-EINYLLNVYNTH 299 (501)
T ss_dssp CBCCEEEEEEEEE--CSSS--CSCEEEEECTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHH-HHHHHHHHHHHH
T ss_pred ccccceeEEEEEC--CCCC--CceEEEeecCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHH-HHHHHHHHHHHh
Confidence 1111111111122 1111 1112222 35667888998876542221111000 1111122222 223333332211
Q ss_pred Ch-HHHHHHHcCCCCceEeecccccCccccc-ccccCCCcEEE--eccCcCCCCCCcccchhhhhhHHHHHHHHHHHHh
Q 015303 251 PA-QVKAVIEKTPLDSIISSRLQYRQPQEVL-WGNISRGSVCV--AGDALHPMTPDIGQGGCAALEDGIVLARCINEAL 325 (409)
Q Consensus 251 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~l--vGDAA~~~~P~~g~G~~~al~~a~~la~~l~~~~ 325 (409)
-+ .+ ....+.. .+.-.+-..+.... ......+.++. .++..+.+-..+|.|+..+-.-|..+++.+.+.+
T Consensus 300 ~p~~l----~~~~v~~-~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 300 FKKQL----SRDDIVW-TYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp BSSCC----CGGGCCE-EEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGGGS
T ss_pred cCCCC----CcccEEE-EEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHHhh
Confidence 11 10 0001111 11111111111000 11223355665 5666666777778887777666677776666554
No 43
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.61 E-value=1e-13 Score=132.73 Aligned_cols=203 Identities=12% Similarity=0.064 Sum_probs=107.3
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHHHhhhCCCCC-------cccceeeE
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLGFKNP-------AFVGRSAI 181 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~~~~~-------~~~~~~~~ 181 (409)
.|.+.|.+.+..++|+++++|++|+.+++++.|++.+|++++||.||.|...+... +.+..... .+.....
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~-~l~~~~~~~~~~~~~~~~~~~~- 313 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAA-GMLSELPAISHLKNMHSTSVAN- 313 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHH-HHTTTSTTHHHHHTCEEEEEEE-
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHH-HHcCCchhhHHHhcCCCCceEE-
Confidence 56677777765579999999999999888899999999889999999999977643 33322211 1111111
Q ss_pred EEeecCCCCC--CCCCceeeeecCC-c--EEE-EE-----ec--CCCeEEEEEEecCCCcCcccccChHHHHHHHHHHhC
Q 015303 182 RGYSDFKGSH--GFEPNFLQFFGKG-L--RSG-FI-----PC--DDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLH 248 (409)
Q Consensus 182 ~~~~~~~~~~--~~~~~~~~~~~~~-~--~~~-~~-----p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
....++.+. .....+....... . ... .+ |. +++...+...............+.+++.+.+++.+.
T Consensus 314 -v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (470)
T 3i6d_A 314 -VALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLK 392 (470)
T ss_dssp -EEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHG
T ss_pred -EEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHH
Confidence 112222211 0011111222111 1 111 11 11 223322222222222222245677788888887776
Q ss_pred CCChHHHHHHHcCCC-CceEeecccc--cCcccc-c---c-cc--cCCCcEEEeccCcCCCCCCcccchhhhhhHHHHHH
Q 015303 249 DLPAQVKAVIEKTPL-DSIISSRLQY--RQPQEV-L---W-GN--ISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLA 318 (409)
Q Consensus 249 ~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~-~---~-~~--~~~~~v~lvGDAA~~~~P~~g~G~~~al~~a~~la 318 (409)
.+.+.. ..+. ..+..|+... ..+-.. . . .. -..+++.+.||+. .|.|++.|+.++..+|
T Consensus 393 ~~~g~~-----~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~------~g~gv~~a~~sG~~aA 461 (470)
T 3i6d_A 393 KVMNIN-----GEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASF------EGVGIPDCIDQGKAAV 461 (470)
T ss_dssp GGSCCC-----SCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTT------SCCSHHHHHHHHHHHH
T ss_pred HHhCCC-----CCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecC------CCCCHHHHHHHHHHHH
Confidence 442211 1111 1223333211 111000 0 0 00 0236899999964 3678999999999999
Q ss_pred HHHHHHh
Q 015303 319 RCINEAL 325 (409)
Q Consensus 319 ~~l~~~~ 325 (409)
+.|.+.+
T Consensus 462 ~~i~~~l 468 (470)
T 3i6d_A 462 SDALTYL 468 (470)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9987643
No 44
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.61 E-value=9.3e-15 Score=136.84 Aligned_cols=151 Identities=17% Similarity=0.172 Sum_probs=94.7
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcc----ccee-cc-----c---------cHHHHHHHcCch
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTG----FAFT-VW-----T---------NAWKALDAVGIG 62 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~----~~~~-~~-----~---------~~~~~l~~~gl~ 62 (409)
++++||+|||||++|+++|+.|+++|++|+|+|+.+.+.... .+.+ ++ + .....+..+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 346899999999999999999999999999999988653210 0000 00 0 011222332211
Q ss_pred hHHHhccccccceeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE
Q 015303 63 NSLRQQHQQLRSIVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL 140 (409)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~ 140 (409)
+.+... ...++.+.....+ .......+..+.+.|.+.+ .+++++++++|+++..+++.+.
T Consensus 105 ~~~~~~--~~~Gi~~~~~~~g----------------~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~ 166 (417)
T 3v76_A 105 DFVALV--ERHGIGWHEKTLG----------------QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFR 166 (417)
T ss_dssp HHHHHH--HHTTCCEEECSTT----------------EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEE
T ss_pred HHHHHH--HHcCCCcEEeeCC----------------EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEE
Confidence 111000 0001111111111 0111244566777776655 2789999999999999988999
Q ss_pred EEecCCcEEeccEEEecCCCch-----------HHHhhhCCC
Q 015303 141 LHLADGTILKTKVLIGCDGVNS-----------IVAKWLGFK 171 (409)
Q Consensus 141 v~~~~g~~~~ad~vV~AdG~~S-----------~vr~~l~~~ 171 (409)
|++.++ +++||.||+|+|.+| .+.+.+|..
T Consensus 167 V~~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 167 VTTSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp EEETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred EEECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 999888 799999999999998 466666665
No 45
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.59 E-value=2.4e-14 Score=139.45 Aligned_cols=68 Identities=13% Similarity=-0.055 Sum_probs=53.4
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeE-EEEecC---C--cEEeccEEEecCCCch-HHHhhhCCC
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLAD---G--TILKTKVLIGCDGVNS-IVAKWLGFK 171 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v-~v~~~~---g--~~~~ad~vV~AdG~~S-~vr~~l~~~ 171 (409)
.++...+...|.+.+ .|++++++++|+++..+++++ .|++.+ | .+++||.||.|+|.+| .+++.++..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 567778888777655 489999999999999988764 466553 3 3789999999999999 567777665
No 46
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.57 E-value=2.4e-13 Score=126.12 Aligned_cols=59 Identities=20% Similarity=0.255 Sum_probs=49.0
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
.++...+.+.|.+.+ .+++++++++|++++.+++++.|++.+|+ ++||.||.|+|.+|.
T Consensus 145 ~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 456667777777655 37899999999999988878888888775 999999999999874
No 47
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.54 E-value=6.8e-13 Score=121.58 Aligned_cols=143 Identities=13% Similarity=0.025 Sum_probs=82.6
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCceEEEeCCCCcCCcccc-----------------eeccccHHHHHHHcCchhH
Q 015303 5 EDIVIVGAGIAGLTTSLGLYR---LGIRSMVLESSESLRVTGFA-----------------FTVWTNAWKALDAVGIGNS 64 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~-----------------~~~~~~~~~~l~~~gl~~~ 64 (409)
+||+|||||++|+++|+.|++ .|++|+|+||+..+...... ....+.....+..+ .+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~--~~~ 79 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRF--YDE 79 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHH--HHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHH--HHH
Confidence 599999999999999999999 99999999998653211000 00011111011110 111
Q ss_pred HHhccccccceeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec
Q 015303 65 LRQQHQQLRSIVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA 144 (409)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~ 144 (409)
+...+.. ..+. . ............ .....-.-..+.+.|.+.. +++|+++++|++|+.++++|+|++.
T Consensus 80 ~~~~g~~----~~~~--~-~~~~~~~~~~~~----~~~~~~g~~~l~~~l~~~~-g~~i~~~~~V~~i~~~~~~~~v~~~ 147 (342)
T 3qj4_A 80 LLAYGVL----RPLS--S-PIEGMVMKEGDC----NFVAPQGISSIIKHYLKES-GAEVYFRHRVTQINLRDDKWEVSKQ 147 (342)
T ss_dssp HHHTTSC----EECC--S-CEETCCC--CCE----EEECTTCTTHHHHHHHHHH-TCEEESSCCEEEEEECSSSEEEEES
T ss_pred HHhCCCe----ecCc--h-hhcceeccCCcc----ceecCCCHHHHHHHHHHhc-CCEEEeCCEEEEEEEcCCEEEEEEC
Confidence 1111110 0000 0 000000000000 0000011234556666555 7899999999999999889999999
Q ss_pred CCcEEeccEEEecCCCc
Q 015303 145 DGTILKTKVLIGCDGVN 161 (409)
Q Consensus 145 ~g~~~~ad~vV~AdG~~ 161 (409)
+|+++++|.||.|....
T Consensus 148 ~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 148 TGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp SSCCEEESEEEECSCHH
T ss_pred CCCEEEcCEEEECCCHH
Confidence 99888999999999853
No 48
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.53 E-value=1.2e-14 Score=138.13 Aligned_cols=162 Identities=19% Similarity=0.179 Sum_probs=94.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCc----ccce-eccc--cHHHHHHHcCchhHHHhcc----ccc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVT----GFAF-TVWT--NAWKALDAVGIGNSLRQQH----QQL 72 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~----~~~~-~~~~--~~~~~l~~~gl~~~~~~~~----~~~ 72 (409)
++||+|||||++|+++|+.|+++|.+|+|+||.+.+... +.+. .+.. ....++..++....+.... ...
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 589999999999999999999999999999998764321 0010 0110 0112222222111110000 000
Q ss_pred cceeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCe-EEEEecCCcEE
Q 015303 73 RSIVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLADGTIL 149 (409)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~ 149 (409)
..+.++. ..+-. +.....+...+. ......+.+.|.+.+ .+++++++++|+++..+++. +.|++.+|+++
T Consensus 106 ~~~~~~~-~~G~~---~~~~~~g~~~p~---~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i 178 (447)
T 2i0z_A 106 DIITFFE-NLGVK---LKEEDHGRMFPV---SNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVL 178 (447)
T ss_dssp HHHHHHH-HTTCC---EEECGGGEEEET---TCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEE
T ss_pred HHHHHHH-hcCCc---eEEeeCCEEECC---CCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEE
Confidence 0000000 00000 000000000000 012455666665544 47999999999999987777 78888888789
Q ss_pred eccEEEecCCCch-----------HHHhhhCCCC
Q 015303 150 KTKVLIGCDGVNS-----------IVAKWLGFKN 172 (409)
Q Consensus 150 ~ad~vV~AdG~~S-----------~vr~~l~~~~ 172 (409)
+||.||+|+|.+| .+++.+|...
T Consensus 179 ~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 179 ETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp ECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred ECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 9999999999999 7888887654
No 49
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.53 E-value=1.1e-12 Score=124.76 Aligned_cols=69 Identities=17% Similarity=0.161 Sum_probs=53.5
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEE---------------eCCeE-EEEecCCcEE--eccEEEecCCCchH
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEE---------------SGHFK-LLHLADGTIL--KTKVLIGCDGVNSI 163 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~---------------~~~~v-~v~~~~g~~~--~ad~vV~AdG~~S~ 163 (409)
.++...+.+.|.+.+ .+++++++++|+++.. +++++ .|.+.+| ++ +||.||.|+|.+|.
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred EEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 466677887777655 4789999999999987 45554 6777777 58 99999999999987
Q ss_pred -HHhhhCCCCC
Q 015303 164 -VAKWLGFKNP 173 (409)
Q Consensus 164 -vr~~l~~~~~ 173 (409)
+...++...+
T Consensus 256 ~l~~~~g~~~~ 266 (448)
T 3axb_A 256 RLLNPLGIDTF 266 (448)
T ss_dssp HHHGGGTCCCS
T ss_pred HHHHHcCCCCc
Confidence 6666665543
No 50
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.53 E-value=3.5e-15 Score=139.28 Aligned_cols=150 Identities=23% Similarity=0.185 Sum_probs=92.0
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcc----cce---e---cccc---------HHHHHHHcCc
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTG----FAF---T---VWTN---------AWKALDAVGI 61 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~----~~~---~---~~~~---------~~~~l~~~gl 61 (409)
||+++||+||||||+|+++|+.|+++|.+|+|+|+.+.+.... .+. . ..+. ....+..+..
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTN 80 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCH
Confidence 7778999999999999999999999999999999987642210 000 0 0000 0011111111
Q ss_pred h---hHHHhccccccceeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEe-
Q 015303 62 G---NSLRQQHQQLRSIVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEES- 135 (409)
Q Consensus 62 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~- 135 (409)
. +.+...+. .+.....+.. ++ . . .+..+.+.|.+.+ .+++++++++|+++..+
T Consensus 81 ~~~~~~~~~~Gi-----~~~~~~~g~~-----~p---------~-~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~ 139 (401)
T 2gqf_A 81 WDFISLVAEQGI-----TYHEKELGQL-----FC---------D-E-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQ 139 (401)
T ss_dssp HHHHHHHHHTTC-----CEEECSTTEE-----EE---------T-T-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECC
T ss_pred HHHHHHHHhCCC-----ceEECcCCEE-----cc---------C-C-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEccc
Confidence 0 00111111 1110000000 00 0 0 3455556665544 37899999999999876
Q ss_pred ---CCeEEEEecCCcEEeccEEEecCCCch-----------HHHhhhCCCC
Q 015303 136 ---GHFKLLHLADGTILKTKVLIGCDGVNS-----------IVAKWLGFKN 172 (409)
Q Consensus 136 ---~~~v~v~~~~g~~~~ad~vV~AdG~~S-----------~vr~~l~~~~ 172 (409)
++.+.|++.++ +++||.||+|+|.+| .+.+.+|...
T Consensus 140 ~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i 189 (401)
T 2gqf_A 140 NDEKVRFVLQVNST-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPV 189 (401)
T ss_dssp SCSSCCEEEEETTE-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCE
T ss_pred CcCCCeEEEEECCC-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCc
Confidence 56688888777 799999999999999 4566666553
No 51
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.50 E-value=1.7e-13 Score=126.21 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=86.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+|||||++|+++|..|+++|++|+|+|+.+.+..... . . +.........
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~-----~----------~----------~~~~~~~~~~- 55 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ-----H----------A----------WHSLHLFSPA- 55 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG-----G----------S----------CTTCBCSSCG-
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc-----C----------C----------CCCcEecCch-
Confidence 458999999999999999999999999999999875431100 0 0 0000000000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE-EEecCCcEEeccEEEecCC
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG 159 (409)
....+...... ........+..+.+++.+.+ .+++++++++|++++.+++.+. |++.++ ++++|.||.|+|
T Consensus 56 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG 129 (357)
T 4a9w_A 56 ----GWSSIPGWPMP-ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATG 129 (357)
T ss_dssp ----GGSCCSSSCCC-CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCC
T ss_pred ----hhhhCCCCCCC-CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCC
Confidence 00000000000 01112345667777766543 3788999999999999999999 988888 799999999999
Q ss_pred CchH
Q 015303 160 VNSI 163 (409)
Q Consensus 160 ~~S~ 163 (409)
.+|.
T Consensus 130 ~~~~ 133 (357)
T 4a9w_A 130 TWGE 133 (357)
T ss_dssp SGGG
T ss_pred CCCC
Confidence 8773
No 52
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.48 E-value=9.5e-13 Score=127.15 Aligned_cols=62 Identities=21% Similarity=0.291 Sum_probs=43.7
Q ss_pred HHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE-EEecCCcEEeccEEEecCCCchHHHhhhC
Q 015303 108 KLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNSIVAKWLG 169 (409)
Q Consensus 108 ~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~l~ 169 (409)
..+.+.|.+.+ .|++|+++++|++|..++++++ |++.||+++.||.||.+.+.....++.++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcc
Confidence 45566666544 3789999999999999998866 88999999999999998888877766653
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.48 E-value=5.3e-13 Score=128.40 Aligned_cols=162 Identities=14% Similarity=0.178 Sum_probs=87.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchh-HHH-----hccccccceee
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGN-SLR-----QQHQQLRSIVA 77 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~-----~~~~~~~~~~~ 77 (409)
++||+||||||+|+++|+.|++.|++|+|+|+.+.+....+. ....+....+.. ... ..+....+...
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~------~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~ 180 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKD------TFGFWRKRTLNPESNVQFGEGGAGTFSDGKLY 180 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHH------HHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccc------hhcccccccccccccceeccCCcccccCCceE
Confidence 479999999999999999999999999999998653211100 000001100000 000 00000000000
Q ss_pred eecCCCCcc--ccc-cccccccc------CCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCe-EEEEecC
Q 015303 78 TPTISGKPS--SER-SLKVQGKY------GEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLAD 145 (409)
Q Consensus 78 ~~~~~~~~~--~~~-~~~~~~~~------~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~ 145 (409)
......... ..+ .+...+.. ............+.+.|.+.+ .+++++++++|+++..+++. +.|++.+
T Consensus 181 ~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~ 260 (549)
T 3nlc_A 181 SQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN 260 (549)
T ss_dssp CCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETT
T ss_pred EEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECC
Confidence 000000000 000 00000000 000111123355555555543 37999999999999988776 4588899
Q ss_pred CcEEeccEEEecCCCchH----HHhhhCCC
Q 015303 146 GTILKTKVLIGCDGVNSI----VAKWLGFK 171 (409)
Q Consensus 146 g~~~~ad~vV~AdG~~S~----vr~~l~~~ 171 (409)
|++++||+||+|+|.+|. ..+..+..
T Consensus 261 G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 261 GEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp SCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred CCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 989999999999999995 33444554
No 54
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.47 E-value=7.3e-12 Score=118.30 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=45.0
Q ss_pred HHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE-EEecCCcEEeccEEEecCCCchHHHhhh
Q 015303 109 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNSIVAKWL 168 (409)
Q Consensus 109 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~l 168 (409)
.+.+.|.+.+ .+++|+++++|++|..++++++ |++ +|++++||.||.|.|.+...+ .+
T Consensus 197 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~-ll 257 (425)
T 3ka7_A 197 GIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAV-LC 257 (425)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHH-HT
T ss_pred HHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHH-hc
Confidence 4555555544 3789999999999999888876 655 477899999999999877643 44
No 55
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.46 E-value=1.8e-11 Score=117.33 Aligned_cols=56 Identities=18% Similarity=0.159 Sum_probs=46.8
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHHH
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVA 165 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr 165 (409)
.|.+.|.+.+..++|+++++|++|+.+++++.|++.+| +++||.||.|.+.+...+
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ 292 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ 292 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH
Confidence 46666777665579999999999999999999999998 799999999999765433
No 56
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.46 E-value=3.6e-13 Score=126.30 Aligned_cols=168 Identities=15% Similarity=0.147 Sum_probs=91.4
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcc-c-ce-ec-cccH------HHHHHHcCchhHHHhc--c
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTG-F-AF-TV-WTNA------WKALDAVGIGNSLRQQ--H 69 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~-~-~~-~~-~~~~------~~~l~~~gl~~~~~~~--~ 69 (409)
++||+|||||++|+++|+.|+++ |++|+|+|+.......+ . +. .+ .+.. ....+.++++...... .
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 48999999999999999999999 99999999986443221 1 11 12 1110 1111111122110000 0
Q ss_pred ccc--cceee-eecC--CCCcccccc----cccc------cc----cCCccceeccHHHHHHHHHhhC--CCceEEeCCe
Q 015303 70 QQL--RSIVA-TPTI--SGKPSSERS----LKVQ------GK----YGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQ 128 (409)
Q Consensus 70 ~~~--~~~~~-~~~~--~~~~~~~~~----~~~~------~~----~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~ 128 (409)
..+ .+... .... .+ .+.... ++.. .. ...+....++...+.+.|.+.+ .+++++++++
T Consensus 116 ~~~~~~g~l~~~~~~~~~g-~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~ 194 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSG-LTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTR 194 (405)
T ss_dssp CCEEECCEEEEESSCCSSS-CEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCE
T ss_pred CcEEeeCeEEehhhHhHCC-CCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCE
Confidence 000 01100 0000 00 000000 0000 00 0011223567778888887765 4789999999
Q ss_pred EE---------EEEEeCCeEEEEecCCcEEeccEEEecCCCch-HHHh-hhCCCCC
Q 015303 129 VV---------SIEESGHFKLLHLADGTILKTKVLIGCDGVNS-IVAK-WLGFKNP 173 (409)
Q Consensus 129 v~---------~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S-~vr~-~l~~~~~ 173 (409)
|+ ++..+++.+.|++.++ +++||.||.|+|.+| .+++ .++...+
T Consensus 195 v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~~~ 249 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLHTR 249 (405)
T ss_dssp EEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCCCC
T ss_pred EEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCCCCC
Confidence 99 8877777777777666 799999999999999 6777 7776544
No 57
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.46 E-value=9.4e-13 Score=117.15 Aligned_cols=132 Identities=19% Similarity=0.243 Sum_probs=84.8
Q ss_pred cccEEEECCChHHHHHHHHHHHc-CCceEEEeCCCCcCCcc--c-----ceeccccHHHHHHHcCchhHHHhccccccce
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL-GIRSMVLESSESLRVTG--F-----AFTVWTNAWKALDAVGIGNSLRQQHQQLRSI 75 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~-g~~V~v~E~~~~~~~~~--~-----~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 75 (409)
++||+||||||+|+++|+.|+++ |.+|+|+|+.+.+.... + ...+.....+.++.+|+. +.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~---------~~-- 107 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVA---------YD-- 107 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCC---------CE--
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCC---------cc--
Confidence 57999999999999999999997 99999999987653211 0 011112223333333321 00
Q ss_pred eeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeCCeE-EEEec-------
Q 015303 76 VATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFK-LLHLA------- 144 (409)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v-~v~~~------- 144 (409)
. .+. .........+...|.+.+ .+++++++++|+++..+++.+ .+.+.
T Consensus 108 ---~--~~~----------------~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~ 166 (284)
T 1rp0_A 108 ---E--QDT----------------YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQN 166 (284)
T ss_dssp ---E--CSS----------------EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTC
T ss_pred ---c--CCC----------------EEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccc
Confidence 0 000 000123455555555543 478999999999999887754 33332
Q ss_pred --CC-----cEEeccEEEecCCCchHHHhh
Q 015303 145 --DG-----TILKTKVLIGCDGVNSIVAKW 167 (409)
Q Consensus 145 --~g-----~~~~ad~vV~AdG~~S~vr~~ 167 (409)
++ .+++||.||+|+|.+|.++..
T Consensus 167 ~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 167 HHTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp TTTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred cCccccCceEEEECCEEEECCCCchHHHHH
Confidence 22 478999999999999877654
No 58
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.46 E-value=8.9e-13 Score=109.03 Aligned_cols=116 Identities=23% Similarity=0.341 Sum_probs=83.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....... .+ .. ..+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~---------------~~----------------~~-~~~- 48 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS---------------RV----------------PN-YPG- 48 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS---------------CC----------------CC-STT-
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch---------------hh----------------hc-cCC-
Confidence 7999999999999999999999999999999863211000 00 00 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
++ ..+....+.+.+.+.+ .+++++++ +|++++.+++.+.+++.++ ++++|+||.|+|..+
T Consensus 49 ------~~----------~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 49 ------LL----------DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp ------CT----------TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCC
T ss_pred ------Cc----------CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCC
Confidence 00 0123345555554433 37899999 9999998877888998888 799999999999999
Q ss_pred HHHhhhCCC
Q 015303 163 IVAKWLGFK 171 (409)
Q Consensus 163 ~vr~~l~~~ 171 (409)
.+++.++.+
T Consensus 111 ~~~~~~g~~ 119 (180)
T 2ywl_A 111 TLPSLLGLT 119 (180)
T ss_dssp HHHHHHTCC
T ss_pred CccccCCCC
Confidence 887777643
No 59
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.45 E-value=4.5e-13 Score=120.28 Aligned_cols=132 Identities=22% Similarity=0.270 Sum_probs=83.8
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcc-------cceeccccHHHHHHHcCchhHHHhccccccc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTG-------FAFTVWTNAWKALDAVGIGNSLRQQHQQLRS 74 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~-------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~ 74 (409)
++||+||||||+|+++|+.|+++ |++|+|+|+...+.... ....+.+.....++.+|+.-. .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~---------~ 149 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYE---------D 149 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCE---------E
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCccc---------c
Confidence 58999999999999999999997 99999999987653111 111223344555555554210 0
Q ss_pred eeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeC---------------
Q 015303 75 IVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESG--------------- 136 (409)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~--------------- 136 (409)
. +. + ....+...+.+.|.+.+ ++++++++++++++..++
T Consensus 150 ------~-G~----~------------~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~ 206 (344)
T 3jsk_A 150 ------E-GD----Y------------VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAE 206 (344)
T ss_dssp ------C-SS----E------------EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------------
T ss_pred ------c-CC----e------------EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccc
Confidence 0 00 0 00112334445555433 478999999999987665
Q ss_pred --C--e---EEEEe----c--------CCcEEeccEEEecCCCchHHHhh
Q 015303 137 --H--F---KLLHL----A--------DGTILKTKVLIGCDGVNSIVAKW 167 (409)
Q Consensus 137 --~--~---v~v~~----~--------~g~~~~ad~vV~AdG~~S~vr~~ 167 (409)
+ + +.+.. . +..+++|++||+|||..|++++.
T Consensus 207 ~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~ 256 (344)
T 3jsk_A 207 DEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAF 256 (344)
T ss_dssp --CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCH
T ss_pred cCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHH
Confidence 2 2 22221 1 22479999999999999986444
No 60
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.44 E-value=4.9e-13 Score=115.30 Aligned_cols=128 Identities=16% Similarity=0.108 Sum_probs=84.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+|+.+|..|++.|.+|+|+|+.... .+ ..+.+.. .++. .
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~--~G--~~~~~~~------~~~~-------------------~ 52 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA--VM--MPFLPPK------PPFP-------------------P 52 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG--TT--CCSSCCC------SCCC-------------------T
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc--CC--cccCccc------cccc-------------------h
Confidence 4589999999999999999999999999999998421 11 1111100 0000 0
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeCCeE-EEEecCCcEEeccEEEecC
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad~vV~Ad 158 (409)
......++ +.. .+ ++..+.+.|.+.+ ++++++ +++|+++..+++.+ .+.+.+|.+++||+||.|+
T Consensus 53 ~~~~~~~~-d~~----g~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~ 121 (232)
T 2cul_A 53 GSLLERAY-DPK----DE-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAV 121 (232)
T ss_dssp TCHHHHHC-CTT----CC-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECC
T ss_pred hhHHhhhc-cCC----CC-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECC
Confidence 00000000 000 00 4666666666644 477887 57999999887774 6788888889999999999
Q ss_pred CCchHHHhhhCC
Q 015303 159 GVNSIVAKWLGF 170 (409)
Q Consensus 159 G~~S~vr~~l~~ 170 (409)
|.+|..+..+|.
T Consensus 122 G~~s~~~~~~G~ 133 (232)
T 2cul_A 122 GSFLGARLFLGG 133 (232)
T ss_dssp TTCSSCEEEETT
T ss_pred CCChhhceecCC
Confidence 999877665543
No 61
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.44 E-value=5e-13 Score=122.12 Aligned_cols=123 Identities=17% Similarity=0.226 Sum_probs=85.2
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++++||+||||||+|+++|..|+++|++|+|+|+++.+... ... . .+. ...++ .
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~------------~~~-~----------~~~--~~~~~-~ 56 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQ------------LTA-L----------YPE--KYIYD-V 56 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHH------------HHH-T----------CTT--SEECC-S
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCe------------eec-c----------CCC--ceeec-c
Confidence 34689999999999999999999999999999998653200 000 0 000 00000 0
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCC--CceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCC
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDG 159 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG 159 (409)
.+ + ..+.+..+.+.+.+.+. +++++++++|+.++.+++.+.|++.++.++++|.||.|+|
T Consensus 57 ~~-------~-----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG 118 (335)
T 2zbw_A 57 AG-------F-----------PKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAG 118 (335)
T ss_dssp TT-------C-----------SSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCT
T ss_pred CC-------C-----------CCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCC
Confidence 00 0 01334555555554432 5788999999999988888889998888899999999999
Q ss_pred CchHHHhhh
Q 015303 160 VNSIVAKWL 168 (409)
Q Consensus 160 ~~S~vr~~l 168 (409)
.+|...+..
T Consensus 119 ~~~~~p~~~ 127 (335)
T 2zbw_A 119 VGAFEPRRI 127 (335)
T ss_dssp TSEEEECCC
T ss_pred CCCCCCCCC
Confidence 976554443
No 62
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.43 E-value=4e-13 Score=124.05 Aligned_cols=124 Identities=15% Similarity=0.170 Sum_probs=84.6
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++++||+||||||+|+++|+.|++.|++|+|||+.+.+.. .+... .+. ...+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg-------------------~~~~~----~~~--~~~~~- 64 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGG-------------------QLAAL----YPE--KHIYD- 64 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH-------------------HHHHT----CTT--SEECC-
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC-------------------ccccc----CCC--ccccc-
Confidence 45568999999999999999999999999999999865320 00000 000 00000
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCC-eEEEEecCCcEEeccEEEec
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGC 157 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~A 157 (409)
..+ + ..+.+..+.+.|.+.+ .+++++++++|+.++..++ .+.|++.++.++++|.||.|
T Consensus 65 ~~~-------~-----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~A 126 (360)
T 3ab1_A 65 VAG-------F-----------PEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIA 126 (360)
T ss_dssp STT-------C-----------SSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEEC
T ss_pred CCC-------C-----------CCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEc
Confidence 000 0 0134455555555543 2678999999999998765 68899988888999999999
Q ss_pred CCCchHHHhhh
Q 015303 158 DGVNSIVAKWL 168 (409)
Q Consensus 158 dG~~S~vr~~l 168 (409)
+|..|...+.+
T Consensus 127 tG~~~~~~~~~ 137 (360)
T 3ab1_A 127 AGLGAFEPRKL 137 (360)
T ss_dssp CTTCSCCBCCC
T ss_pred cCCCcCCCCCC
Confidence 99977554433
No 63
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.43 E-value=1.8e-12 Score=119.86 Aligned_cols=38 Identities=32% Similarity=0.538 Sum_probs=34.5
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++++||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 34578999999999999999999999999999999753
No 64
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.42 E-value=4.2e-12 Score=119.80 Aligned_cols=58 Identities=24% Similarity=0.291 Sum_probs=44.9
Q ss_pred HHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHHHhhhC
Q 015303 109 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLG 169 (409)
Q Consensus 109 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~l~ 169 (409)
.+.+.|.+.+ .+++|+++++|++|..+++++ | ..+|++++||.||.|.|.+... +.++
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH-HhcC
Confidence 4555555544 368999999999999888888 5 5677789999999999987654 4554
No 65
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.42 E-value=8.1e-12 Score=127.63 Aligned_cols=70 Identities=24% Similarity=0.349 Sum_probs=54.6
Q ss_pred eeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeE-EEEecCCcEEeccEEEecCCCchHH-HhhhCCCCC
Q 015303 103 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIV-AKWLGFKNP 173 (409)
Q Consensus 103 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad~vV~AdG~~S~v-r~~l~~~~~ 173 (409)
..++...+...|.+.+ .+++++++++|++|+.+++++ .|.+.+| +++||.||.|+|.+|.. .+.++...+
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~p 219 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVP 219 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCC
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCcc
Confidence 3567778888887765 478999999999999888775 5777777 69999999999999864 444565544
No 66
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.42 E-value=1.3e-12 Score=126.58 Aligned_cols=146 Identities=16% Similarity=0.157 Sum_probs=90.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC-CcCCcccceeccc----cHHHHHHHcC-chhHH-Hhccccccce
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE-SLRVTGFAFTVWT----NAWKALDAVG-IGNSL-RQQHQQLRSI 75 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~-~~~~~~~~~~~~~----~~~~~l~~~g-l~~~~-~~~~~~~~~~ 75 (409)
.++||+|||||+||+++|+.|++.|.+|+|+|+.. .....+|...... ...+.+..++ +.... ...+ +
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~g-----i 94 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATG-----I 94 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHE-----E
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcC-----C
Confidence 46899999999999999999999999999999985 2333333222211 1122222222 11111 1111 1
Q ss_pred eeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeCCeEE-EEecCCcEEec
Q 015303 76 VATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKT 151 (409)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~a 151 (409)
.+....... +.........+++..+...|.+.+ ++++++ +.+|+.+..+++.+. |.+.+|.+++|
T Consensus 95 ~f~~l~~~k----------gpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~A 163 (641)
T 3cp8_A 95 QFRMLNRSK----------GPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQA 163 (641)
T ss_dssp EEEEECSSS----------CTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEE
T ss_pred chhhccccc----------CccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEe
Confidence 111111100 000001123567777777776654 478885 559999988888776 88888889999
Q ss_pred cEEEecCCCchHH
Q 015303 152 KVLIGCDGVNSIV 164 (409)
Q Consensus 152 d~vV~AdG~~S~v 164 (409)
|.||+|+|.++..
T Consensus 164 d~VVLATG~~s~~ 176 (641)
T 3cp8_A 164 KAAILACGTFLNG 176 (641)
T ss_dssp EEEEECCTTCBTC
T ss_pred CEEEECcCCCCCc
Confidence 9999999988653
No 67
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.39 E-value=1.3e-12 Score=126.75 Aligned_cols=150 Identities=18% Similarity=0.160 Sum_probs=92.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC-CcCCcccceeccc----cHHHHHHHcC-chhHHHhcccccccee
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE-SLRVTGFAFTVWT----NAWKALDAVG-IGNSLRQQHQQLRSIV 76 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~-~~~~~~~~~~~~~----~~~~~l~~~g-l~~~~~~~~~~~~~~~ 76 (409)
.++||+|||||+||+++|+.|++.|.+|+|+|++. .....+|...+.. ...+.++.++ ........ ..+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~----~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQ----AGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhh----cccc
Confidence 35899999999999999999999999999999974 2333333222211 1223334433 11111110 1111
Q ss_pred eeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeCCeE-EEEecCCcEEecc
Q 015303 77 ATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTK 152 (409)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad 152 (409)
+....... +.........+++..+.+.|.+.+ +++++ ++++|+.+..+++.+ .|.+.+|.+++||
T Consensus 103 f~~l~~~k----------gpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad 171 (651)
T 3ces_A 103 FRILNASK----------GPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAK 171 (651)
T ss_dssp EEEESTTS----------CGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEE
T ss_pred hhhhhccc----------CcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECC
Confidence 11111100 000001112467777777766544 47888 567999998777664 6788888889999
Q ss_pred EEEecCCCchHHHhh
Q 015303 153 VLIGCDGVNSIVAKW 167 (409)
Q Consensus 153 ~vV~AdG~~S~vr~~ 167 (409)
.||+|+|.+|..+..
T Consensus 172 ~VVLATGt~s~~~~i 186 (651)
T 3ces_A 172 AVVLTVGTFLDGKIH 186 (651)
T ss_dssp EEEECCSTTTCCEEE
T ss_pred EEEEcCCCCccCccc
Confidence 999999998765443
No 68
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.39 E-value=2e-12 Score=126.46 Aligned_cols=155 Identities=17% Similarity=0.197 Sum_probs=89.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcc--cceeccccHHHHHHHcCchhHHH--------------
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTG--FAFTVWTNAWKALDAVGIGNSLR-------------- 66 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~~~~-------------- 66 (409)
.++||+|||||++|+++|+.|++.|.+|+||||.+.+.... .+..+........+.+|+.+...
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 35799999999999999999999999999999998653221 11111111112222233221111
Q ss_pred --------------------hccccccceeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEE
Q 015303 67 --------------------QQHQQLRSIVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIR 124 (409)
Q Consensus 67 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~ 124 (409)
..+.++... ....+....... ......+....+.+.|.+.+ .+++|+
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~---~~~~g~~~~r~~--------~~~~~~~~~~~l~~~L~~~~~~~gv~i~ 268 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDL---KRSGGARVDRTH--------RPHGGKSSGPEIIDTLRKAAKEQGIDTR 268 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEE---ECCTTCSSCCEE--------ECSSSSCHHHHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccc---cccCCCCCCcee--------ecCCCCCCHHHHHHHHHHHHHhcCCEEE
Confidence 111111000 000000000000 00000134566667776654 379999
Q ss_pred eCCeEEEEEEeC-CeE---EEEecCCc--EEeccEEEecCCCchHHHhhh
Q 015303 125 YSSQVVSIEESG-HFK---LLHLADGT--ILKTKVLIGCDGVNSIVAKWL 168 (409)
Q Consensus 125 ~~~~v~~i~~~~-~~v---~v~~~~g~--~~~ad~vV~AdG~~S~vr~~l 168 (409)
++++|+++..++ +++ ++...+|+ +++||.||+|+|.+|..++.+
T Consensus 269 ~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 269 LNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp CSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred eCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 999999998877 653 33333665 689999999999999875543
No 69
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.39 E-value=1.8e-12 Score=123.15 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=87.8
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhc-cccccc----
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQ-HQQLRS---- 74 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-~~~~~~---- 74 (409)
++.+||+||||||+|+++|..|++.|+ +|+|||+.+.+... ........ ..+++....... ..+...
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~---~~~~~~~~---~~~~ip~~~~~~~~~~~~~g~~~ 77 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGV---WNYTSTLS---NKLPVPSTNPILTTEPIVGPAAL 77 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTT---CSCCSCCC---SCCCSSBCCTTCCCCCBCCSSSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCe---ecCCCCCC---ccccccccccccccccccccccc
Confidence 356899999999999999999999999 99999998654210 00000000 000010000000 000000
Q ss_pred ----eeeeec-CCCCcccccccccccccCCccceeccHHHHHHHHHhhCC--CceEEeCCeEEEEEEeCCeEEEEecC--
Q 015303 75 ----IVATPT-ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLAD-- 145 (409)
Q Consensus 75 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~-- 145 (409)
...+.. ..........+...... ......+.+..+.++|.+.+. +..++++++|++++..++.|+|++.+
T Consensus 78 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~ 156 (447)
T 2gv8_A 78 PVYPSPLYRDLQTNTPIELMGYCDQSFK-PQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTK 156 (447)
T ss_dssp CBCCCCCCTTCBCSSCHHHHSCTTCCCC-TTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESS
T ss_pred CCccCchhhhhccCCCHHHhccCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecC
Confidence 000000 00000000011110000 011123567788887776543 46799999999999988888888876
Q ss_pred -Cc---EEeccEEEecCCCchH
Q 015303 146 -GT---ILKTKVLIGCDGVNSI 163 (409)
Q Consensus 146 -g~---~~~ad~vV~AdG~~S~ 163 (409)
|+ ++.+|.||+|+|.+|.
T Consensus 157 ~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 157 AGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp TTCCEEEEEESEEEECCCSSSS
T ss_pred CCCeeEEEEeCEEEECCCCCCC
Confidence 66 7999999999999764
No 70
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.38 E-value=2.3e-11 Score=115.08 Aligned_cols=40 Identities=25% Similarity=0.411 Sum_probs=37.1
Q ss_pred eEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 122 TIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 122 ~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
+|+++++|++|+.++++++|++.+|++++||.||.|.|..
T Consensus 219 ~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 219 EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 8999999999999888899999999889999999999954
No 71
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.38 E-value=3.6e-12 Score=123.05 Aligned_cols=147 Identities=20% Similarity=0.156 Sum_probs=91.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC-CcCCcccceecc----ccHHHHHHHcC-chhHHHhccccccceee
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE-SLRVTGFAFTVW----TNAWKALDAVG-IGNSLRQQHQQLRSIVA 77 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~-~~~~~~~~~~~~----~~~~~~l~~~g-l~~~~~~~~~~~~~~~~ 77 (409)
++||+|||||+||+.+|+.|++.|.+|+|+|++. .....+|...+. ....+.++.+| ........ .++.+
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~----~gi~f 102 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQ----TGIQF 102 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHH----HEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhh----cccce
Confidence 5899999999999999999999999999999974 233233322211 11233344443 22222111 01111
Q ss_pred eecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeCCeE-EEEecCCcEEeccE
Q 015303 78 TPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKV 153 (409)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad~ 153 (409)
....... +.........+++..+.+.|.+.+ +++++ ++++|+++..+++.+ .|.+.+|.++.||.
T Consensus 103 ~~l~~~k----------Gpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~Ada 171 (637)
T 2zxi_A 103 KMLNTRK----------GKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKA 171 (637)
T ss_dssp EEESTTS----------CGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSE
T ss_pred eeccccc----------CccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCE
Confidence 1111000 000001112467777777776644 47888 578999998877765 58888888999999
Q ss_pred EEecCCCchHHH
Q 015303 154 LIGCDGVNSIVA 165 (409)
Q Consensus 154 vV~AdG~~S~vr 165 (409)
||+|+|.++..+
T Consensus 172 VVLATG~~s~~~ 183 (637)
T 2zxi_A 172 VVVTTGTFLNGV 183 (637)
T ss_dssp EEECCTTCBTCE
T ss_pred EEEccCCCccCc
Confidence 999999886543
No 72
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.37 E-value=2.9e-10 Score=108.96 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=42.7
Q ss_pred HHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe---cCCcEEeccEEEecCCCchH
Q 015303 108 KLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL---ADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 108 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~---~~g~~~~ad~vV~AdG~~S~ 163 (409)
..|.+.|.+.+ +++|+++++|++|..+++++.|++ .+|++++||.||.|.+.+..
T Consensus 238 ~~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 238 QVLIDALAASL-GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp HHHHHHHHHHH-GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHh-hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 34555565555 568999999999998887888888 67778999999999997754
No 73
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.36 E-value=1.1e-10 Score=113.16 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=44.6
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
.+.+.|.+.. +++|+++++|++|+.+++++.|++.+|++++||.||.|.+.+..
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLL-GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHH-GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHc-CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 3444555444 57899999999999888889999999989999999999998763
No 74
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.34 E-value=1.1e-11 Score=110.94 Aligned_cols=108 Identities=17% Similarity=0.173 Sum_probs=77.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
+||+||||||+|+++|..|++.|++|+|+|+........ .. ..
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~-----------------------------~~------~~-- 45 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFA-----------------------------SH------SH-- 45 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGC-----------------------------SC------CC--
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccc-----------------------------hh------hc--
Confidence 799999999999999999999999999999874210000 00 00
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.+. ....+....+...+.+.+ ++++++ +++|+.++.+++.+.+++.+++++++|.||.|+|..
T Consensus 46 -----~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 46 -----GFL--------GQDGKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp -----SST--------TCTTCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred -----CCc--------CCCCCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 000 000133455666655544 245555 459999999988999999999899999999999987
Q ss_pred hH
Q 015303 162 SI 163 (409)
Q Consensus 162 S~ 163 (409)
+.
T Consensus 112 ~~ 113 (297)
T 3fbs_A 112 DE 113 (297)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 75
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.33 E-value=7e-12 Score=111.91 Aligned_cols=133 Identities=18% Similarity=0.247 Sum_probs=81.8
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcc-------cceeccccHHHHHHHcCchhHHHhccccccc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTG-------FAFTVWTNAWKALDAVGIGNSLRQQHQQLRS 74 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~-------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~ 74 (409)
.+||+||||||+|+++|+.|++. |++|+|+|+.+.+.... ....+.+.....|+.+|+. +.
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~---------~~- 134 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP---------YE- 134 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCC---------CE-
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcc---------cc-
Confidence 46999999999999999999998 99999999987653111 0111222333444444321 00
Q ss_pred eeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEeC----C--eEE-EEe-
Q 015303 75 IVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESG----H--FKL-LHL- 143 (409)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~----~--~v~-v~~- 143 (409)
. . +. .....+...+.+.|.+.+ ++++++.+++|+++..++ + ++. |..
T Consensus 135 ----~-~-g~----------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~ 192 (326)
T 2gjc_A 135 ----D-E-GD----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTN 192 (326)
T ss_dssp ----E-C-SS----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEE
T ss_pred ----c-C-CC----------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEec
Confidence 0 0 00 000112345555555543 588999999999998763 3 322 221
Q ss_pred -----c--------CCcEEec---------------cEEEecCCCchHHHhhh
Q 015303 144 -----A--------DGTILKT---------------KVLIGCDGVNSIVAKWL 168 (409)
Q Consensus 144 -----~--------~g~~~~a---------------d~vV~AdG~~S~vr~~l 168 (409)
. ++.++.| |+||+|+|..|++.+.+
T Consensus 193 ~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 193 WTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp EHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred ceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 1 3347899 99999999998876665
No 76
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.32 E-value=1.3e-11 Score=111.12 Aligned_cols=109 Identities=21% Similarity=0.199 Sum_probs=68.4
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
|++|||+||||||||+++|+.|++.|++|+|+|++.. . +. +. . . ...+ .
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~---g--g~-~~-------------~-----~--~~~~-----~ 52 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN---R--NR-VT-------------Q-----N--SHGF-----I 52 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC---G--GG-GS-------------S-----C--BCCS-----T
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC---C--Ce-ee-------------e-----e--cCCc-----c
Confidence 6679999999999999999999999999999998632 1 10 00 0 0 0000 0
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhC---CCceEEeCCeEEEEEEe-CCeEEEEecCCcEEeccEEEec
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEES-GHFKLLHLADGTILKTKVLIGC 157 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~-~~~v~v~~~~g~~~~ad~vV~A 157 (409)
. .+ .+....+.+...+.+ ..+.+.. ..+..+... .+.+++.+.+++++++|.||.|
T Consensus 53 ~--------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiA 112 (304)
T 4fk1_A 53 T--------RD-----------GIKPEEFKEIGLNEVMKYPSVHYYE-KTVVMITKQSTGLFEIVTKDHTKYLAERVLLA 112 (304)
T ss_dssp T--------CT-----------TBCHHHHHHHHHHHHTTSTTEEEEE-CCEEEEEECTTSCEEEEETTCCEEEEEEEEEC
T ss_pred C--------CC-----------CCCHHHHHHHHHHHHHhcCCEEEEe-eEEEEeeecCCCcEEEEECCCCEEEeCEEEEc
Confidence 0 00 122233333333322 2344444 445555444 4568899999999999999999
Q ss_pred CCCc
Q 015303 158 DGVN 161 (409)
Q Consensus 158 dG~~ 161 (409)
+|..
T Consensus 113 TGs~ 116 (304)
T 4fk1_A 113 TGMQ 116 (304)
T ss_dssp CCCE
T ss_pred cCCc
Confidence 9975
No 77
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.32 E-value=1.3e-11 Score=120.80 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=85.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCc----ccceeccccHHHHHHHcCchhHHH-------------
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVT----GFAFTVWTNAWKALDAVGIGNSLR------------- 66 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~----~~~~~~~~~~~~~l~~~gl~~~~~------------- 66 (409)
++||+|||||++|+++|+.|+++|.+|+|+||.+.+... +.++.... ....+.+|+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~--~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAW--TDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSS--CHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCC--CHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 589999999999999999999999999999998765321 11221111 12223333221110
Q ss_pred ---------------------hccccccceeeeecCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceE
Q 015303 67 ---------------------QQHQQLRSIVATPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTI 123 (409)
Q Consensus 67 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i 123 (409)
..+.++... ....+......... .........+.+.|.+.+ .+++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~~~~g~~~~r~~~~--------~~g~~~g~~l~~~L~~~~~~~gv~i 272 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDV---GMMGGASVNRAHRP--------TGGAGVGAHVVQVLYDNAVKRNIDL 272 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEE---ECCTTCSSCCEEES--------TTTCCHHHHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccC---cccCCcCCCeeEec--------CCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 111111000 00000000000000 000023456666666554 37999
Q ss_pred EeCCeEEEEEEeC-CeE---EEEecCCc--EEeccEEEecCCCchHHH
Q 015303 124 RYSSQVVSIEESG-HFK---LLHLADGT--ILKTKVLIGCDGVNSIVA 165 (409)
Q Consensus 124 ~~~~~v~~i~~~~-~~v---~v~~~~g~--~~~ad~vV~AdG~~S~vr 165 (409)
+++++|+++..++ +.+ ++...+|+ +++||.||+|+|.+|..+
T Consensus 273 ~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 273 RMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNN 320 (571)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCH
T ss_pred EeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCH
Confidence 9999999998876 543 33333565 689999999999998744
No 78
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.32 E-value=1.3e-10 Score=113.28 Aligned_cols=67 Identities=13% Similarity=-0.020 Sum_probs=48.3
Q ss_pred eccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCe-EEEEec---CCc--EEeccEEEecCCCchH-HHhhhCC
Q 015303 104 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLA---DGT--ILKTKVLIGCDGVNSI-VAKWLGF 170 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~---~g~--~~~ad~vV~AdG~~S~-vr~~l~~ 170 (409)
.++...+...+.+.+ .|++++++++|+++..+++. +.|++. +++ +++||.||.|+|.+|. +++..+.
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 355566666666544 47899999999999988776 345543 333 6999999999999984 4555454
No 79
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.32 E-value=1.2e-11 Score=112.16 Aligned_cols=109 Identities=18% Similarity=0.180 Sum_probs=76.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|+.|++.|++|+|+|++ + +..... .. ...
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~---gg~~~~------------------------~~-~~~----- 59 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P---GGQLTE------------------------AG-IVD----- 59 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T---TGGGGG------------------------CC-EEC-----
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C---CCeecc------------------------cc-ccc-----
Confidence 579999999999999999999999999999987 1 110000 00 000
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.++. .. .+....+.+.+.+.+ .++++++ ++|++++.+++.+.+++.++.++.+|.||.|+|..
T Consensus 60 ------~~~~------~~--~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 60 ------DYLG------LI--EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp ------CSTT------ST--TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred ------ccCC------CC--CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 0000 00 133455555555433 3688888 99999998888899999998899999999999987
Q ss_pred h
Q 015303 162 S 162 (409)
Q Consensus 162 S 162 (409)
.
T Consensus 125 ~ 125 (323)
T 3f8d_A 125 R 125 (323)
T ss_dssp E
T ss_pred C
Confidence 4
No 80
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.31 E-value=4.2e-12 Score=115.85 Aligned_cols=118 Identities=16% Similarity=0.088 Sum_probs=77.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+|+++|+.|++.|++|+|+|+.........+. +.. . . ...
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-~~~-----------------~----~--~~~---- 58 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ-LTT-----------------T----T--DVE---- 58 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG-GGG-----------------C----S--EEC----
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce-eee-----------------c----c--ccc----
Confidence 35799999999999999999999999999999821100000000 000 0 0 000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCC
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGV 160 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 160 (409)
.++. . ...+.+..+.+.|.+.+ .++++++++ |+.++.+++.++|++ ++.++++|.||+|+|.
T Consensus 59 -------~~~~------~-~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~ 122 (333)
T 1vdc_A 59 -------NFPG------F-PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGA 122 (333)
T ss_dssp -------CSTT------C-TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCE
T ss_pred -------cCCC------C-ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCC
Confidence 0000 0 01234555666555443 368898887 999988777788888 7778999999999998
Q ss_pred chHH
Q 015303 161 NSIV 164 (409)
Q Consensus 161 ~S~v 164 (409)
++..
T Consensus 123 ~~~~ 126 (333)
T 1vdc_A 123 VAKR 126 (333)
T ss_dssp EECC
T ss_pred CcCC
Confidence 7643
No 81
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.31 E-value=2.2e-11 Score=109.91 Aligned_cols=112 Identities=18% Similarity=0.207 Sum_probs=79.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
+||+||||||+|+++|..|++.|+ +|+|+|+... + +..... . .. .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~----g-g~~~~~------------------~----~~--~----- 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP----G-GQITGS------------------S----EI--E----- 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST----T-CGGGGC------------------S----CB--C-----
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC----C-cccccc------------------c----cc--c-----
Confidence 799999999999999999999999 9999998521 1 110000 0 00 0
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.++.. ...+.+..+.+.+.+.+ .++++++ ++|++++.+++.+.+++.++.++++|.||.|+|.+
T Consensus 48 ------~~~~~-------~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 48 ------NYPGV-------KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp ------CSTTC-------CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEE
T ss_pred ------cCCCC-------cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCC
Confidence 00000 01245556666665533 3678887 79999998888888888888889999999999987
Q ss_pred hHH
Q 015303 162 SIV 164 (409)
Q Consensus 162 S~v 164 (409)
+..
T Consensus 114 ~~~ 116 (311)
T 2q0l_A 114 PKR 116 (311)
T ss_dssp ECC
T ss_pred CCC
Confidence 643
No 82
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.30 E-value=2.2e-11 Score=110.32 Aligned_cols=113 Identities=19% Similarity=0.151 Sum_probs=76.1
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++++||+||||||+|+++|+.|++.|++|+|+|+... +....... ...
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~----gg~~~~~~-----------------------~~~---- 61 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA----GGLTAEAP-----------------------LVE---- 61 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSST----TGGGGGCS-----------------------CBC----
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC----Cccccccc-----------------------hhh----
Confidence 44568999999999999999999999999999998521 11000000 000
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecC
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
.++. . ..+.+..+.+.+.+.+ .++++++ ++|+.++.+++.+.|.+ ++.++.+|.||.|+
T Consensus 62 ---------~~~~------~--~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~At 122 (319)
T 3cty_A 62 ---------NYLG------F--KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITT 122 (319)
T ss_dssp ---------CBTT------B--SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECC
T ss_pred ---------hcCC------C--cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECC
Confidence 0000 0 0133445555554433 2678877 78999998888888877 55679999999999
Q ss_pred CCchH
Q 015303 159 GVNSI 163 (409)
Q Consensus 159 G~~S~ 163 (409)
|.++.
T Consensus 123 G~~~~ 127 (319)
T 3cty_A 123 GTTHK 127 (319)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 98653
No 83
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.30 E-value=1.3e-11 Score=112.78 Aligned_cols=118 Identities=16% Similarity=0.133 Sum_probs=79.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+|+++|+.|++.|++|+|+|+.+.......+..... ....
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~------------------------~~~~---- 72 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT------------------------TEIE---- 72 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS------------------------SEEC----
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc------------------------hhhc----
Confidence 458999999999999999999999999999999762211111100000 0000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEec---CCcEEeccEEEec
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLA---DGTILKTKVLIGC 157 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~---~g~~~~ad~vV~A 157 (409)
.++.. ...+.+..+...+.+.+ .++++++++ |++++.+++.+.+++. ++.++.+|.||.|
T Consensus 73 -------~~~~~-------~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlA 137 (338)
T 3itj_A 73 -------NFPGF-------PDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILA 137 (338)
T ss_dssp -------CSTTC-------TTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEEC
T ss_pred -------ccCCC-------cccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEEC
Confidence 00000 00134455555555443 278999988 9999988888888884 6678999999999
Q ss_pred CCCchH
Q 015303 158 DGVNSI 163 (409)
Q Consensus 158 dG~~S~ 163 (409)
+|..+.
T Consensus 138 tG~~~~ 143 (338)
T 3itj_A 138 TGASAK 143 (338)
T ss_dssp CCEEEC
T ss_pred cCCCcC
Confidence 998653
No 84
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.29 E-value=3e-11 Score=116.89 Aligned_cols=133 Identities=16% Similarity=0.176 Sum_probs=85.2
Q ss_pred cccEEEECCChHHHHHHHHHH-HcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLY-RLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~-~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
++||+|||||++|+++|..|+ +.|++|+|+|+++...... .....-|+...+... .
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw----------~~~~ypg~~~d~~s~-----~-------- 64 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTW----------YWNRYPGALSDTESH-----L-------- 64 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHH----------HHCCCTTCEEEEEGG-----G--------
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcc----------cccCCCCceecCCcc-----e--------
Confidence 479999999999999999999 9999999999986532100 000000110000000 0
Q ss_pred CCcccccccccc-cccCCccceeccHHHHHHHHHhhCC--Cc--eEEeCCeEEEEEEeCC--eEEEEecCCcEEeccEEE
Q 015303 83 GKPSSERSLKVQ-GKYGEHEMRCVRRKLLLETLAKELP--SG--TIRYSSQVVSIEESGH--FKLLHLADGTILKTKVLI 155 (409)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~--~~--~i~~~~~v~~i~~~~~--~v~v~~~~g~~~~ad~vV 155 (409)
....+... ............+..+.+++.+.+. ++ .++++++|++++.+++ .|+|++.+|++++||+||
T Consensus 65 ----~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV 140 (540)
T 3gwf_A 65 ----YRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVV 140 (540)
T ss_dssp ----SSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEE
T ss_pred ----eeeccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEE
Confidence 00000000 0000111224567777777665442 44 7999999999998776 799999999999999999
Q ss_pred ecCCCchH
Q 015303 156 GCDGVNSI 163 (409)
Q Consensus 156 ~AdG~~S~ 163 (409)
.|+|..|.
T Consensus 141 ~AtG~~s~ 148 (540)
T 3gwf_A 141 NAVGLLSA 148 (540)
T ss_dssp ECCCSCCS
T ss_pred ECCccccc
Confidence 99998763
No 85
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.28 E-value=1e-10 Score=112.73 Aligned_cols=55 Identities=13% Similarity=0.090 Sum_probs=43.9
Q ss_pred HHHHHHHhhC--CC-ceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 109 LLLETLAKEL--PS-GTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 109 ~l~~~L~~~~--~~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
.+.+.|.+.+ .+ ++|+++++|++|+.+++++.|++.+|++++||.||.|.|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 3444454443 24 7799999999999888889999999988999999999997643
No 86
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.28 E-value=2e-10 Score=110.04 Aligned_cols=53 Identities=13% Similarity=0.112 Sum_probs=40.9
Q ss_pred HHHHHHhhC--CCceEEeCCeEEEEEEeCCe-EEEEecCCcEEeccEEEecCCCchH
Q 015303 110 LLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 110 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
|.+.|.+.+ .+++|+++++|++|+.++++ +.|++ ++.+++||.||.|.+.+..
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 455555544 36899999999999987766 88876 4557999999999987644
No 87
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.28 E-value=2.1e-11 Score=118.51 Aligned_cols=134 Identities=16% Similarity=0.137 Sum_probs=83.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+... . . .+.. .+... + .
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~---w-------~----~~~~----------pg~~~-d--~ 67 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGV---W-------Y----WNRY----------PGARC-D--I 67 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH---H-------H----HCCC----------TTCBC-S--S
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc---c-------c----ccCC----------Cceee-c--c
Confidence 3589999999999999999999999999999998763211 0 0 0000 00000 0 0
Q ss_pred CCcccccccccc-cccCCccceeccHHHHHHHHHhhC---C-CceEEeCCeEEEEEEeCC--eEEEEecCCcEEeccEEE
Q 015303 83 GKPSSERSLKVQ-GKYGEHEMRCVRRKLLLETLAKEL---P-SGTIRYSSQVVSIEESGH--FKLLHLADGTILKTKVLI 155 (409)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~---~-~~~i~~~~~v~~i~~~~~--~v~v~~~~g~~~~ad~vV 155 (409)
......+.+... ............+..+.++|...+ . +.+++++++|++++.+++ .|+|++.+|++++||+||
T Consensus 68 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV 147 (542)
T 1w4x_A 68 ESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLI 147 (542)
T ss_dssp CTTTSSCCSCHHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEE
T ss_pred cccccccccChhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEE
Confidence 000000000000 000001112345666766665432 2 367999999999988754 699999999889999999
Q ss_pred ecCCCchH
Q 015303 156 GCDGVNSI 163 (409)
Q Consensus 156 ~AdG~~S~ 163 (409)
.|+|.+|.
T Consensus 148 ~AtG~~s~ 155 (542)
T 1w4x_A 148 MASGQLSV 155 (542)
T ss_dssp ECCCSCCC
T ss_pred ECcCCCCC
Confidence 99998874
No 88
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.28 E-value=2.7e-11 Score=110.04 Aligned_cols=113 Identities=18% Similarity=0.248 Sum_probs=76.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+|+++|..|++.|++|+|+|+. .+ +...... ... . ...
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~---gg~~~~~-----------------------~~~--~-~~~ 56 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MP---GGQIAWS-----------------------EEV--E-NFP 56 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CT---TGGGGGC-----------------------SCB--C-CST
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CC---Ccccccc-----------------------ccc--c-cCC
Confidence 3589999999999999999999999999999998 21 1100000 000 0 000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEe--CCe-EEEEecCCcEEeccEEEec
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEES--GHF-KLLHLADGTILKTKVLIGC 157 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~--~~~-v~v~~~~g~~~~ad~vV~A 157 (409)
+ +. ..+.+..+.+.+.+.+ .++++++ ++|++++.+ ++. +.+.+.++.++++|.||.|
T Consensus 57 ~-------~~----------~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~A 118 (325)
T 2q7v_A 57 G-------FP----------EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILA 118 (325)
T ss_dssp T-------CS----------SCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEEC
T ss_pred C-------CC----------CCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEEC
Confidence 0 00 0133445555554433 2678887 689999876 444 7777888889999999999
Q ss_pred CCCchH
Q 015303 158 DGVNSI 163 (409)
Q Consensus 158 dG~~S~ 163 (409)
+|..+.
T Consensus 119 tG~~~~ 124 (325)
T 2q7v_A 119 TGADPR 124 (325)
T ss_dssp CCEEEC
T ss_pred cCCCcC
Confidence 998653
No 89
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.26 E-value=2.1e-11 Score=110.56 Aligned_cols=114 Identities=18% Similarity=0.215 Sum_probs=76.5
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
||+++||+||||||+|+++|..|++.|++|+|+|+... +....... ..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~----gg~~~~~~-----------------------~~----- 49 (320)
T 1trb_A 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEK----GGQLTTTT-----------------------EV----- 49 (320)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSST----TGGGGGCS-----------------------BC-----
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCC----CceEecch-----------------------hh-----
Confidence 45568999999999999999999999999999996421 11000000 00
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecC
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
.. ++.. ...+.+..+.+.+.+.+ .++++++++ ++.++.+++.+.+ +.++.++.+|.||.|+
T Consensus 50 -~~-------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~At 112 (320)
T 1trb_A 50 -EN-------WPGD-------PNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIAT 112 (320)
T ss_dssp -CC-------STTC-------CSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECC
T ss_pred -hh-------CCCC-------CCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECC
Confidence 00 0000 00133445555544433 368888886 9999887777887 6777889999999999
Q ss_pred CCchH
Q 015303 159 GVNSI 163 (409)
Q Consensus 159 G~~S~ 163 (409)
|..+.
T Consensus 113 G~~~~ 117 (320)
T 1trb_A 113 GASAR 117 (320)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98653
No 90
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.25 E-value=3.3e-11 Score=111.47 Aligned_cols=138 Identities=14% Similarity=0.173 Sum_probs=80.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
+++||+||||||+|+++|..|++.|+ +|+|||+++ + +......+... .+ ...........+....
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~---Gg~~~~~~~~~------~~----~~~~~~~~~~g~~~~~ 68 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-V---GHSFKHWPKST------RT----ITPSFTSNGFGMPDMN 68 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-T---THHHHTSCTTC------BC----SSCCCCCGGGTCCCTT
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-C---CCccccCcccc------cc----cCcchhcccCCchhhh
Confidence 45899999999999999999999999 999999986 2 11000000000 00 0000000000000000
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCC
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDG 159 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG 159 (409)
.... .. .... ......+.+..+.+.+.+.+ .+++++++++|++++.+++.+.|++.++ ++.+|.||.|+|
T Consensus 69 ~~~~-~~--~~~~----~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG 140 (369)
T 3d1c_A 69 AISM-DT--SPAF----TFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATG 140 (369)
T ss_dssp CSST-TC--CHHH----HHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCC
T ss_pred hccc-cc--cccc----cccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCC
Confidence 0000 00 0000 00011244555655554432 3789999999999998877888888777 589999999999
Q ss_pred Cch
Q 015303 160 VNS 162 (409)
Q Consensus 160 ~~S 162 (409)
.++
T Consensus 141 ~~~ 143 (369)
T 3d1c_A 141 DYN 143 (369)
T ss_dssp STT
T ss_pred CCC
Confidence 875
No 91
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.25 E-value=4.3e-11 Score=114.00 Aligned_cols=146 Identities=16% Similarity=0.207 Sum_probs=84.2
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCc---eEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeee
Q 015303 5 EDIVIVGAGIAGLTTSLGLYR---LGIR---SMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVAT 78 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~---~g~~---V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
+||+||||||+|+++|..|++ .|++ |+|||+.+.+.. .....+.. . ...+|+. . ....+.....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG---~w~~~~~~-g-~~~~g~~--~--~~~~y~~l~~- 72 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGG---QWNYTWRT-G-LDENGEP--V--HSSMYRYLWS- 72 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCG---GGSCCSCC-S-BCTTSSB--C--CCCCCTTCBC-
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCC---EeecCCCC-C-ccccCCC--C--cCccccchhh-
Confidence 699999999999999999999 9999 999999865321 11000000 0 0001110 0 0000000000
Q ss_pred ecCCCCccccccccccc---ccCCccceeccHHHHHHHHHhhCC--Cce--EEeCCeEEEEEEeCC--eEEEEecC---C
Q 015303 79 PTISGKPSSERSLKVQG---KYGEHEMRCVRRKLLLETLAKELP--SGT--IRYSSQVVSIEESGH--FKLLHLAD---G 146 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~---~~~~~~~~~i~r~~l~~~L~~~~~--~~~--i~~~~~v~~i~~~~~--~v~v~~~~---g 146 (409)
......+.+...+ .........+.+..+.++|.+.+. +++ ++++++|++++..++ .|+|++.+ |
T Consensus 73 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g 148 (464)
T 2xve_A 73 ----NGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD 148 (464)
T ss_dssp ----SSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT
T ss_pred ----cCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC
Confidence 0000001111100 000001224667788877766542 555 899999999998776 78887765 3
Q ss_pred --cEEeccEEEecCCCchHH
Q 015303 147 --TILKTKVLIGCDGVNSIV 164 (409)
Q Consensus 147 --~~~~ad~vV~AdG~~S~v 164 (409)
.++.+|.||+|+|.+|.-
T Consensus 149 ~~~~~~~d~VVvAtG~~s~p 168 (464)
T 2xve_A 149 TIYSEEFDYVVCCTGHFSTP 168 (464)
T ss_dssp EEEEEEESEEEECCCSSSSB
T ss_pred ceEEEEcCEEEECCCCCCCC
Confidence 468999999999976643
No 92
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.25 E-value=5.2e-11 Score=109.41 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcC------CceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLG------IRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g------~~V~v~E~~~~ 38 (409)
+||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 39999999999999999999998 99999999864
No 93
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.24 E-value=3.9e-11 Score=109.51 Aligned_cols=113 Identities=20% Similarity=0.263 Sum_probs=75.6
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++++||+||||||+|+++|..|++.|++|+|+|+... .+ ...... ..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~---gg-~~~~~~-----------------------~~------ 58 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSF---GG-ALMTTT-----------------------DV------ 58 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSC---SC-GGGSCS-----------------------CB------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC---CC-ceeccc-----------------------hh------
Confidence 3468999999999999999999999999999996521 11 000000 00
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEE-EecCCcEEeccEEEecC
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLL-HLADGTILKTKVLIGCD 158 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v-~~~~g~~~~ad~vV~Ad 158 (409)
. .++.. ...+.+..+.+.+.+.+ .++++++++ +++++. ++.++| .+.++.++++|.||.|+
T Consensus 59 ~-------~~~~~-------~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAt 122 (335)
T 2a87_A 59 E-------NYPGF-------RNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAM 122 (335)
T ss_dssp C-------CSTTC-------TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECC
T ss_pred h-------hcCCC-------CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECC
Confidence 0 00000 00133445555554432 268898887 888887 556777 78888889999999999
Q ss_pred CCchH
Q 015303 159 GVNSI 163 (409)
Q Consensus 159 G~~S~ 163 (409)
|..+.
T Consensus 123 G~~~~ 127 (335)
T 2a87_A 123 GAAAR 127 (335)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 98653
No 94
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.24 E-value=5.9e-10 Score=107.57 Aligned_cols=64 Identities=22% Similarity=0.328 Sum_probs=46.6
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcc-------c-----ceec---cccHHHHHHHcCchhH
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTG-------F-----AFTV---WTNAWKALDAVGIGNS 64 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~-------~-----~~~~---~~~~~~~l~~~gl~~~ 64 (409)
|++.+||+|||||++||++|+.|+++|++|+|+|+++.+.... . ...+ .+...++++++|+.+.
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 3446899999999999999999999999999999987653211 0 0111 2456788888887543
No 95
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.23 E-value=2.9e-11 Score=117.14 Aligned_cols=133 Identities=16% Similarity=0.214 Sum_probs=82.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHc-CchhHHHhccccccceeeeecC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAV-GIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
+++||+|||||++|+++|+.|++.|++|+|||+++..... .. ...+ |+..+. .
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGt----------w~-~~~yPg~~~d~-------~-------- 61 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGT----------WY-WNRYPGCRLDT-------E-------- 61 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH----------HH-HCCCTTCBCSS-------C--------
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----------cc-cCCCCceeecC-------c--------
Confidence 3579999999999999999999999999999998653211 00 0000 000000 0
Q ss_pred CCCccccccccccc-ccCCccceeccHHHHHHHHHhhCC--Cc--eEEeCCeEEEEEEeC--CeEEEEecCCcEEeccEE
Q 015303 82 SGKPSSERSLKVQG-KYGEHEMRCVRRKLLLETLAKELP--SG--TIRYSSQVVSIEESG--HFKLLHLADGTILKTKVL 154 (409)
Q Consensus 82 ~~~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~--~~--~i~~~~~v~~i~~~~--~~v~v~~~~g~~~~ad~v 154 (409)
.....+.+.... ...........+..+.+++.+.+. ++ .++++++|++++.++ +.|.|++.+|++++||+|
T Consensus 62 --~~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~l 139 (545)
T 3uox_A 62 --SYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFL 139 (545)
T ss_dssp --HHHHCHHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEE
T ss_pred --hhhcccccCcccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEE
Confidence 000000000000 000111123455666666654332 33 789999999998765 479999999989999999
Q ss_pred EecCCCchH
Q 015303 155 IGCDGVNSI 163 (409)
Q Consensus 155 V~AdG~~S~ 163 (409)
|.|+|..|.
T Consensus 140 V~AtG~~s~ 148 (545)
T 3uox_A 140 ISATGPLSA 148 (545)
T ss_dssp EECCCSCBC
T ss_pred EECcCCCCC
Confidence 999997663
No 96
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.23 E-value=7.6e-11 Score=114.30 Aligned_cols=133 Identities=19% Similarity=0.205 Sum_probs=84.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+|||||++|+++|+.|++.|++|+|||+++..... ...-..-|+..++... .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGt----------w~~~~ypg~~~dv~s~-----~-------- 76 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGV----------WYWNRYPGARCDVESI-----D-------- 76 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH----------HHHCCCTTCBCSSCTT-----T--------
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----------cccCCCCCceeCCCch-----h--------
Confidence 3579999999999999999999999999999998653210 0000000110000000 0
Q ss_pred CCcccccccccc-cccCCccceeccHHHHHHHHHhhCC--Cc--eEEeCCeEEEEEEeCC--eEEEEecCCcEEeccEEE
Q 015303 83 GKPSSERSLKVQ-GKYGEHEMRCVRRKLLLETLAKELP--SG--TIRYSSQVVSIEESGH--FKLLHLADGTILKTKVLI 155 (409)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~--~~--~i~~~~~v~~i~~~~~--~v~v~~~~g~~~~ad~vV 155 (409)
....+... ............+..+.+++.+.+. ++ .++++++|++++.+++ .|+|++.+|++++||+||
T Consensus 77 ----y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV 152 (549)
T 4ap3_A 77 ----YSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLV 152 (549)
T ss_dssp ----SSCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEE
T ss_pred ----cccccccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEE
Confidence 00000000 0000111123456667766655431 34 7999999999988765 799999999999999999
Q ss_pred ecCCCch
Q 015303 156 GCDGVNS 162 (409)
Q Consensus 156 ~AdG~~S 162 (409)
.|+|..|
T Consensus 153 ~AtG~~s 159 (549)
T 4ap3_A 153 VAAGPLS 159 (549)
T ss_dssp ECCCSEE
T ss_pred ECcCCCC
Confidence 9999765
No 97
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.23 E-value=3.6e-11 Score=109.45 Aligned_cols=114 Identities=23% Similarity=0.203 Sum_probs=80.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
.+||+||||||+|+++|+.|++.|++|+|+|+.+.+... +... .+ ......
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~-------------------~~~~----~~--~~~~~~---- 57 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQ-------------------LSAL----YP--EKYIYD---- 57 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH-------------------HHHH----CT--TSEECC----
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce-------------------ehhc----CC--CceEec----
Confidence 479999999999999999999999999999998752200 0000 00 000000
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCC--CceEEeCCeEEEEEEeCC-eEEEEecCCcEEeccEEEecCCC
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~AdG~ 160 (409)
+. ....+.+..+...+.+.+. +++++++++|++++..++ .+.|++.+++ +.+|.||.|+|.
T Consensus 58 -------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 58 -------VA--------GFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp -------ST--------TCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred -------cC--------CCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 00 0001345666666665543 689999999999998876 7889998887 999999999998
Q ss_pred ch
Q 015303 161 NS 162 (409)
Q Consensus 161 ~S 162 (409)
.+
T Consensus 122 ~~ 123 (332)
T 3lzw_A 122 GA 123 (332)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 98
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.22 E-value=5.7e-11 Score=107.13 Aligned_cols=111 Identities=20% Similarity=0.230 Sum_probs=76.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|..|++.|++|+|+|+... + .... .. . ...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g----G--~~~~--------~~--------------~--~~~---- 46 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG----G--QILD--------TV--------------D--IEN---- 46 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT----G--GGGG--------CC--------------E--ECC----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC----c--eecc--------cc--------------c--ccc----
Confidence 47999999999999999999999999999986411 1 0000 00 0 000
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeC---CeEEEEecCCcEEeccEEEecC
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESG---HFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~---~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
+. ......+..+.+.+.+.+ .+++++++++|+.++.+. +.+.|++.++.++++|.||.|+
T Consensus 47 -------~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~At 111 (310)
T 1fl2_A 47 -------YI--------SVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVAT 111 (310)
T ss_dssp -------BT--------TBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECC
T ss_pred -------cc--------CcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECc
Confidence 00 000123344555554433 378999999999997653 3688989888889999999999
Q ss_pred CCchH
Q 015303 159 GVNSI 163 (409)
Q Consensus 159 G~~S~ 163 (409)
|..+.
T Consensus 112 G~~~~ 116 (310)
T 1fl2_A 112 GAKWR 116 (310)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98653
No 99
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.22 E-value=4.1e-11 Score=120.09 Aligned_cols=50 Identities=24% Similarity=0.260 Sum_probs=42.1
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.+.+.|.+ +++|+++++|++|+.++++++|++.+|.+++||.||.|....
T Consensus 535 ~l~~aLa~---gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 535 VIIEKLAE---GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp HHHHHHHT---TSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred HHHHHHHh---CCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 44455543 678999999999999888999999999899999999999743
No 100
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.19 E-value=2.1e-10 Score=110.72 Aligned_cols=37 Identities=35% Similarity=0.554 Sum_probs=34.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.++||+|||||++|+++|+.|+++|.+|+|+||.+.+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999998765
No 101
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.18 E-value=8.5e-11 Score=106.15 Aligned_cols=119 Identities=20% Similarity=0.233 Sum_probs=74.1
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|+..|||+||||||||+++|..|+++|++|+|+|+......... ..+.+ ...+.+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~-G~~~~-----------------------~~~i~~- 55 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG-GQLTT-----------------------TTIIEN- 55 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT-CGGGG-----------------------SSEECC-
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC-CCcCC-----------------------hHHhhh-
Confidence 77779999999999999999999999999999998753111100 00000 000000
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecC
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
..+ ++ ..+...++.+.+.+.+ .+.++. ...+.......+...+.+.++.++++|.||.|+
T Consensus 56 ~~g-------~~----------~~i~~~~l~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiAT 117 (314)
T 4a5l_A 56 FPG-------FP----------NGIDGNELMMNMRTQSEKYGTTII-TETIDHVDFSTQPFKLFTEEGKEVLTKSVIIAT 117 (314)
T ss_dssp STT-------CT----------TCEEHHHHHHHHHHHHHHTTCEEE-CCCEEEEECSSSSEEEEETTCCEEEEEEEEECC
T ss_pred ccC-------Cc----------ccCCHHHHHHHHHHHHhhcCcEEE-EeEEEEeecCCCceEEEECCCeEEEEeEEEEcc
Confidence 000 00 0133344444444332 134444 445666666667777788888899999999999
Q ss_pred CCch
Q 015303 159 GVNS 162 (409)
Q Consensus 159 G~~S 162 (409)
|...
T Consensus 118 G~~~ 121 (314)
T 4a5l_A 118 GATA 121 (314)
T ss_dssp CEEE
T ss_pred cccc
Confidence 9753
No 102
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.13 E-value=6.9e-10 Score=108.72 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=45.6
Q ss_pred HHHHHHHHhhC--CC-ceEEeCCeEEEEEEeCCeE---EEE-ecCCc--EEeccEEEecCCCchHHHhhh
Q 015303 108 KLLLETLAKEL--PS-GTIRYSSQVVSIEESGHFK---LLH-LADGT--ILKTKVLIGCDGVNSIVAKWL 168 (409)
Q Consensus 108 ~~l~~~L~~~~--~~-~~i~~~~~v~~i~~~~~~v---~v~-~~~g~--~~~ad~vV~AdG~~S~vr~~l 168 (409)
..+...|.+.+ .+ ++++++++|+++..+++.+ .+. ..+|+ ++.|+.||+|+|.+|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 46666666654 24 8999999999998877753 222 25665 689999999999999886544
No 103
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.13 E-value=5.1e-10 Score=106.85 Aligned_cols=145 Identities=15% Similarity=0.156 Sum_probs=82.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcC-----CceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeee
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLG-----IRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVAT 78 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g-----~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
.+||+||||||+|+++|..|++.| ++|+|||+.+....... ..+....+. .....++.....+.....+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~-~~~~~~~~~----~~~~~~l~~~~~p~~~~~~~ 104 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGN-TLVSQSELQ----ISFLKDLVSLRNPTSPYSFV 104 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGG-GCCSSCBCS----SCTTSSSSTTTCTTCTTSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCC-CCCCCCcCC----cchhhccccccCCCCCCChh
Confidence 469999999999999999999999 99999999986542210 000000000 00000000000000000000
Q ss_pred e--cCCCCcccccccccccccCCccceeccHHHHHHHHHhhCC--CceEEeCCeEEEEEEe---CCe--EEEEecCCc--
Q 015303 79 P--TISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEES---GHF--KLLHLADGT-- 147 (409)
Q Consensus 79 ~--~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~---~~~--v~v~~~~g~-- 147 (409)
. ...+.. ..+. ........+..+.+++...+. +++++++++|++++.. ++. ++|++.++.
T Consensus 105 ~~l~~~~~~---~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~ 175 (463)
T 3s5w_A 105 NYLHKHDRL---VDFI------NLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGE 175 (463)
T ss_dssp HHHHHTTCH---HHHH------HHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSC
T ss_pred HhhhhcCce---eecc------cccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCc
Confidence 0 000000 0000 011123467777777765442 5789999999999876 433 477777765
Q ss_pred --EEeccEEEecCCCch
Q 015303 148 --ILKTKVLIGCDGVNS 162 (409)
Q Consensus 148 --~~~ad~vV~AdG~~S 162 (409)
++.+|.||+|+|...
T Consensus 176 ~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 176 ELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEEEESEEEECCCCEE
T ss_pred eEEEEeCEEEECCCCCC
Confidence 899999999999744
No 104
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.12 E-value=6.1e-10 Score=108.76 Aligned_cols=36 Identities=31% Similarity=0.520 Sum_probs=33.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+||+|||+|++|+++|+.|++.|++|+|+|+.+.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 479999999999999999999999999999998765
No 105
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.12 E-value=3.8e-10 Score=109.04 Aligned_cols=112 Identities=22% Similarity=0.259 Sum_probs=77.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
..+||+||||||+|+++|..|++.|++|+|+|+.. + |.... ..++ ..+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-----G-G~~~~--------~~~~--------------~~~---- 258 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-----G-GQVLD--------TVDI--------------ENY---- 258 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-----T-GGGTT--------CSCB--------------CCB----
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-----C-Ccccc--------cccc--------------ccc----
Confidence 35899999999999999999999999999998631 1 11000 0000 000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEe---CCeEEEEecCCcEEeccEEEec
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEES---GHFKLLHLADGTILKTKVLIGC 157 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~---~~~v~v~~~~g~~~~ad~vV~A 157 (409)
... ....+..+...+.+.+ .+++++.+++|+.++.+ ++.+.|++.+|.++++|.||.|
T Consensus 259 ------~~~-----------~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlA 321 (521)
T 1hyu_A 259 ------ISV-----------PKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIA 321 (521)
T ss_dssp ------TTB-----------SSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEEC
T ss_pred ------CCC-----------CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEEC
Confidence 000 0123345555554433 37899999999999764 2368899999988999999999
Q ss_pred CCCchH
Q 015303 158 DGVNSI 163 (409)
Q Consensus 158 dG~~S~ 163 (409)
+|..+.
T Consensus 322 tG~~~~ 327 (521)
T 1hyu_A 322 TGAKWR 327 (521)
T ss_dssp CCEEEC
T ss_pred CCCCcC
Confidence 998653
No 106
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.10 E-value=1.4e-10 Score=111.10 Aligned_cols=39 Identities=21% Similarity=0.475 Sum_probs=35.0
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
|+.++||+||||||+|+++|..|++.|++|+|+|+++.+
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 445789999999999999999999999999999997553
No 107
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.09 E-value=2.3e-10 Score=110.81 Aligned_cols=35 Identities=31% Similarity=0.478 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+|||||++|+++|+.|++ |.+|+|+||....
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 5899999999999999999999 9999999998754
No 108
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.09 E-value=9.6e-11 Score=112.27 Aligned_cols=146 Identities=17% Similarity=0.169 Sum_probs=79.7
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|+.++||+||||||+|+++|..|++.|++|+|+|+++.+..........| +..++...++++.+... ....++...
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p-sk~l~~~~~~~~~~~~~-~~~~gi~~~-- 77 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIP-SKALLNNSHLFHQMHTE-AQKRGIDVN-- 77 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHH-HHHHHHHHHHHHHHHHT-SGGGTEEEC--
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHH-HHHHHHHHHHHHHHHHH-HHhcCcccC--
Confidence 45578999999999999999999999999999999654321100000111 23333333333333211 111122110
Q ss_pred CCCCcccccccccccccCCccceecc--HHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCC--cE------Ee
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVR--RKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG--TI------LK 150 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~--r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~------~~ 150 (409)
.. ..+++..... .....+. +..+.+.+. . .++++++++.+.. +++.++|++.+| .+ ++
T Consensus 78 -~~---~~~~~~~~~~---~~~~~~~~l~~~~~~~~~-~-~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~ 145 (478)
T 1v59_A 78 -GD---IKINVANFQK---AKDDAVKQLTGGIELLFK-K-NKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILD 145 (478)
T ss_dssp -SC---EEECHHHHHH---HHHHHHHHHHHHHHHHHH-H-TTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEE
T ss_pred -CC---CccCHHHHHH---HHHHHHHHHHHHHHHHHH-h-CCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEE
Confidence 00 0111110000 0000000 011222232 2 3789999887652 456788888777 56 99
Q ss_pred ccEEEecCCCch
Q 015303 151 TKVLIGCDGVNS 162 (409)
Q Consensus 151 ad~vV~AdG~~S 162 (409)
+|.||+|+|..+
T Consensus 146 ~d~lViAtGs~p 157 (478)
T 1v59_A 146 VKNIIVATGSEV 157 (478)
T ss_dssp EEEEEECCCEEE
T ss_pred eCEEEECcCCCC
Confidence 999999999876
No 109
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.06 E-value=1e-09 Score=106.18 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhCCCceEEeCCeEEEEEEe-CCeEEEEecCCcEEeccEEEecCCCch
Q 015303 107 RKLLLETLAKELPSGTIRYSSQVVSIEES-GHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 107 r~~l~~~L~~~~~~~~i~~~~~v~~i~~~-~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
-..+.+.|.+.+++.+|+++++|+.|..+ ++.+.|++.+|++++||.||.|.+...
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~ 257 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSV 257 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHH
Confidence 34555666666666789999999999986 567999999998899999999998653
No 110
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.06 E-value=1.2e-09 Score=98.41 Aligned_cols=36 Identities=33% Similarity=0.537 Sum_probs=32.4
Q ss_pred CCC-cccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 1 MES-VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 1 m~~-~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
|++ +|||+||||||||+++|..|++.|++|+|||+.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 654 699999999999999999999999999999986
No 111
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.06 E-value=6.4e-10 Score=104.93 Aligned_cols=113 Identities=19% Similarity=0.265 Sum_probs=73.4
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeee
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVAT 78 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|++++||+|||||++|+++|..|++.|+ +|+|+|+.+...... .+ +...+..
T Consensus 1 M~~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~-----~~----------l~~~~~~----------- 54 (431)
T 1q1r_A 1 MNANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHL-----PP----------LSKAYLA----------- 54 (431)
T ss_dssp -CCSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCS-----GG----------GGTTTTT-----------
T ss_pred CCCCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcC-----CC----------CcHHHhC-----------
Confidence 6667899999999999999999999998 799999875421110 00 0000000
Q ss_pred ecCCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecC
Q 015303 79 PTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
.......+. +. +.+.+.+ .+++++++++|+.++.++. .|++.+|+++.+|.||.|+
T Consensus 55 ---~~~~~~~~~--------------~~---~~~~~~~--~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAt 110 (431)
T 1q1r_A 55 ---GKATAESLY--------------LR---TPDAYAA--QNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLAT 110 (431)
T ss_dssp ---TCSCSGGGB--------------SS---CHHHHHH--TTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECC
T ss_pred ---CCCChHHhc--------------cc---CHHHHHh--CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcC
Confidence 000000000 00 1122322 2789999999999987655 5666788889999999999
Q ss_pred CCchH
Q 015303 159 GVNSI 163 (409)
Q Consensus 159 G~~S~ 163 (409)
|..+.
T Consensus 111 G~~p~ 115 (431)
T 1q1r_A 111 GGRPR 115 (431)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 98653
No 112
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.05 E-value=6e-10 Score=106.30 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=34.7
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++++||+||||||+|+++|..|++.|++|+|+||++.
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 66779999999999999999999999999999998765
No 113
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.05 E-value=1.5e-09 Score=103.37 Aligned_cols=59 Identities=15% Similarity=0.070 Sum_probs=41.5
Q ss_pred HHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE-EEec-CCcEEeccEEEecCCCchHHHhh
Q 015303 108 KLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLA-DGTILKTKVLIGCDGVNSIVAKW 167 (409)
Q Consensus 108 ~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~-~g~~~~ad~vV~AdG~~S~vr~~ 167 (409)
..+.+.|.+.+ .+++++++++| ++..+++.+. +... ++.++.+|.||.|+|.+|.+...
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCcc
Confidence 45555555543 47999999999 9987777642 3332 22347899999999999987543
No 114
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.04 E-value=2e-10 Score=109.53 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=78.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccc---cHHHHHHHcCchhHHHhccccccceeeee
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWT---NAWKALDAVGIGNSLRQQHQQLRSIVATP 79 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~---~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 79 (409)
+++||+||||||+|+++|..|++.|++|+|+|++.. + +..+.. .+..++...++++.+..... ..++. .
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~----g-G~~~~~g~~psk~ll~~~~~~~~~~~~~~-~~g~~--~ 73 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW----G-GVCLNVGCIPSKALLRNAELVHIFTKDAK-AFGIS--G 73 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCT----T-HHHHHHSHHHHHHHHHHHHHHHHHHHHTT-TTTEE--E
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC----C-CcccccCchhhHHHHHHHHHHHHHHHHHH-hcCCC--C
Confidence 358999999999999999999999999999999722 1 111111 12333443334443331111 11111 0
Q ss_pred cCCCCcccccccccccccCCccceeccHHHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCC--cEEeccEEE
Q 015303 80 TISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLI 155 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~~~ad~vV 155 (409)
. ...++..... .....+ ..+.+.+.+.+ .+++++.++.+. .+.+.+++.+.+| .++++|.||
T Consensus 74 --~----~~~~~~~~~~---~~~~~~--~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lV 139 (464)
T 2a8x_A 74 --E----VTFDYGIAYD---RSRKVA--EGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAI 139 (464)
T ss_dssp --C----CEECHHHHHH---HHHHHH--HHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEE
T ss_pred --C----CccCHHHHHH---HHHHHH--HHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEE
Confidence 0 0111110000 000000 12222222211 378888887653 3456788888888 679999999
Q ss_pred ecCCCchHH
Q 015303 156 GCDGVNSIV 164 (409)
Q Consensus 156 ~AdG~~S~v 164 (409)
+|+|..+..
T Consensus 140 iAtG~~~~~ 148 (464)
T 2a8x_A 140 IATGSSTRL 148 (464)
T ss_dssp ECCCEEECC
T ss_pred ECCCCCCCC
Confidence 999987743
No 115
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.03 E-value=2.5e-09 Score=104.73 Aligned_cols=57 Identities=16% Similarity=0.011 Sum_probs=42.9
Q ss_pred HHHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEE-EEe---cCCc--EEeccEEEecCCCchHH
Q 015303 108 KLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHL---ADGT--ILKTKVLIGCDGVNSIV 164 (409)
Q Consensus 108 ~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~---~~g~--~~~ad~vV~AdG~~S~v 164 (409)
..+...|.+.+ .+++|+++++|+++..+++.+. |.. .+|+ ++.|+.||.|+|..+.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 46666776654 4789999999999987776532 332 4565 68999999999999864
No 116
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.02 E-value=2.7e-09 Score=102.56 Aligned_cols=54 Identities=9% Similarity=0.136 Sum_probs=45.0
Q ss_pred HHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCC---cEEeccEEEecCCCc
Q 015303 108 KLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG---TILKTKVLIGCDGVN 161 (409)
Q Consensus 108 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g---~~~~ad~vV~AdG~~ 161 (409)
..|.+.|.+.++..+|+++++|++|+.++++++|++.+| ++++||.||.|...+
T Consensus 239 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 456666776664478999999999999999999998876 579999999999865
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.01 E-value=9.1e-10 Score=105.26 Aligned_cols=149 Identities=15% Similarity=0.137 Sum_probs=77.2
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
+.++||+||||||+|+++|..|++.|++|+|+|+++.+..........| +..++....+.+.+... ....++.. .
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p-~k~l~~~~~~~~~~~~~-~~~~g~~~---~ 78 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIP-SKALLHSSHMYHEAKHS-FANHGVKV---S 78 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHH-HHHHHHHHHHHHHHHHT-HHHHTEEE---S
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccc-hHHHHHHHHHHHHHHHH-HHhcCccc---C
Confidence 3468999999999999999999999999999999865421110011111 11122111111222110 00001110 0
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCC--cEEeccEEEecCC
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDG 159 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~~~ad~vV~AdG 159 (409)
. ...++...-.. .......-+..+.+.+.+ .+++++.++.+. + +.+.+.|++.+| .++++|.||+|+|
T Consensus 79 ~----~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~--~gv~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtG 148 (470)
T 1dxl_A 79 N----VEIDLAAMMGQ-KDKAVSNLTRGIEGLFKK--NKVTYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATG 148 (470)
T ss_dssp C----EEECHHHHHHH-HHHHHHHHHHHHHHHHHH--HTCEEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCC
T ss_pred C----CccCHHHHHHH-HHHHHHHHHHHHHHHHHh--CCCEEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCC
Confidence 0 00111100000 000000000112222222 268999988664 3 456788887777 6799999999999
Q ss_pred CchHHH
Q 015303 160 VNSIVA 165 (409)
Q Consensus 160 ~~S~vr 165 (409)
..+...
T Consensus 149 s~p~~p 154 (470)
T 1dxl_A 149 SDVKSL 154 (470)
T ss_dssp EEECCB
T ss_pred CCCCCC
Confidence 876543
No 118
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.01 E-value=3e-09 Score=103.97 Aligned_cols=36 Identities=28% Similarity=0.368 Sum_probs=33.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+|||||++|+++|+.|++.|.+|+|+||....
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 589999999999999999999999999999998654
No 119
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.99 E-value=3.6e-09 Score=104.33 Aligned_cols=36 Identities=25% Similarity=0.462 Sum_probs=33.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+|||||++||++|+.|++.|.+|+|+||....
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 589999999999999999999999999999998654
No 120
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.99 E-value=4.5e-09 Score=94.70 Aligned_cols=109 Identities=18% Similarity=0.211 Sum_probs=72.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEE-EeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMV-LESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v-~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
.++||+||||||+|+++|..|++.|++|+| +||. .+ + +..... . . ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~---g-G~~~~~-------------------~---~--~~--- 50 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MP---G-GQITSS-------------------S---E--IE--- 50 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-ST---T-GGGGGC-------------------S---C--BC---
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CC---C-ceeeee-------------------c---e--ec---
Confidence 458999999999999999999999999999 9993 22 1 110000 0 0 00
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCC--CceEEeCCeEEEEEEeC--CeEEEEe-cCCcEEeccEEEe
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESG--HFKLLHL-ADGTILKTKVLIG 156 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v~v~~-~~g~~~~ad~vV~ 156 (409)
.++. ....+....+...+.+.+. +++++++ +|+++ .++ +.+.++. .++ ++.+|.||.
T Consensus 51 --------~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvl 112 (315)
T 3r9u_A 51 --------NYPG-------VAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIV 112 (315)
T ss_dssp --------CSTT-------CCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEE
T ss_pred --------cCCC-------CCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEE
Confidence 0000 0002345566666655442 6788888 89999 766 6777523 333 899999999
Q ss_pred cCCCc
Q 015303 157 CDGVN 161 (409)
Q Consensus 157 AdG~~ 161 (409)
|+|..
T Consensus 113 AtG~~ 117 (315)
T 3r9u_A 113 CTGSA 117 (315)
T ss_dssp CCCEE
T ss_pred eeCCC
Confidence 99974
No 121
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.98 E-value=5.1e-09 Score=99.58 Aligned_cols=52 Identities=12% Similarity=0.020 Sum_probs=41.8
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCe-EEEEecCCcEEeccEEEecCCCch
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
.+.+.|.+.+ +++|+++++|++|..++++ +.|++ ++.+++||.||.|.+...
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~ 268 (453)
T 2yg5_A 216 QVSIRMAEAL-GDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNL 268 (453)
T ss_dssp HHHHHHHHHH-GGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGG
T ss_pred HHHHHHHHhc-CCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHH
Confidence 4445555544 5789999999999998888 88876 667899999999999863
No 122
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.97 E-value=4e-09 Score=101.10 Aligned_cols=45 Identities=13% Similarity=0.178 Sum_probs=40.5
Q ss_pred CceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHH
Q 015303 120 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 164 (409)
Q Consensus 120 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 164 (409)
+++++.+++|+.++.+++++.+++.+|+++.+|.||.|+|..+..
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 789999999999998888889999999899999999999986543
No 123
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.95 E-value=2.1e-09 Score=103.22 Aligned_cols=37 Identities=22% Similarity=0.492 Sum_probs=32.5
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+++||+||||||+|+++|..|++.|++|+|+|+++.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4568999999999999999999999999999998755
No 124
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.93 E-value=1.5e-08 Score=95.47 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=42.3
Q ss_pred HHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 108 KLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 108 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
..+.+.|.+.+ +.+++++++|++|..+++++.|++.+|+ ++||.||.|.+....
T Consensus 206 ~~l~~~l~~~l-~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 206 QAMFEHLNATL-EHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHHS-SSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHHhh-cceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 34445555555 3478899999999988888889888875 899999999998643
No 125
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.92 E-value=2.4e-09 Score=102.36 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=65.1
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++||+|||||++|+++|..|++. |++|+|||+++......++ +...+. + .+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~g---------------l~~~~~-------g-~~~--- 56 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCG---------------IPYYVS-------G-EVS--- 56 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccc---------------cchhhc-------C-CCC---
Confidence 46999999999999999999998 8999999998764322111 110000 0 000
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe-cCCc--EEeccEEEecC
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCD 158 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~~~ad~vV~Ad 158 (409)
... .+. .+. .......+.+.+. .+++++++++|+.++.++..+.+.. .+|. ++.+|.||.|+
T Consensus 57 ~~~-----~~~------~~~---~~~~~~~~~~~~~-~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAt 121 (472)
T 3iwa_A 57 NIE-----SLQ------ATP---YNVVRDPEFFRIN-KDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLAL 121 (472)
T ss_dssp ---------------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred chH-----Hhc------ccc---chhccCHHHHhhh-cCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeC
Confidence 000 000 000 0000011122211 2688999999999998888777765 3354 78999999999
Q ss_pred CCc
Q 015303 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 122 G~~ 124 (472)
T 3iwa_A 122 GSK 124 (472)
T ss_dssp CEE
T ss_pred CCC
Confidence 964
No 126
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.90 E-value=4.9e-09 Score=99.52 Aligned_cols=109 Identities=18% Similarity=0.294 Sum_probs=67.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
+++||+|||||++|+++|..|++. |++|+|+|+.+......++ +...+
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~---------------~p~~~--------------- 51 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG---------------IPYVV--------------- 51 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC----------------------------------------
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC---------------Ccccc---------------
Confidence 347999999999999999999998 7899999998753221111 10000
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCc-EEeccEEEecCC
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGT-ILKTKVLIGCDG 159 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~-~~~ad~vV~AdG 159 (409)
.+.. ... . .+ ....+.+.+. .+++++++++|+.++. +...+.+.++. ++.+|.||.|+|
T Consensus 52 -~~~~----~~~--------~--~~--~~~~~~~~~~-~gi~v~~~~~v~~i~~--~~~~v~~~~g~~~~~~d~lviAtG 111 (449)
T 3kd9_A 52 -EGLS----TPD--------K--LM--YYPPEVFIKK-RGIDLHLNAEVIEVDT--GYVRVRENGGEKSYEWDYLVFANG 111 (449)
T ss_dssp -------------------------------CTHHHH-TTCEEETTCEEEEECS--SEEEEECSSSEEEEECSEEEECCC
T ss_pred -CCCC----CHH--------H--hh--hcCHHHHHHh-cCcEEEecCEEEEEec--CCCEEEECCceEEEEcCEEEECCC
Confidence 0000 000 0 00 0000122222 2789999999998854 34667777773 799999999999
Q ss_pred Cc
Q 015303 160 VN 161 (409)
Q Consensus 160 ~~ 161 (409)
..
T Consensus 112 ~~ 113 (449)
T 3kd9_A 112 AS 113 (449)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 127
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.90 E-value=2.2e-09 Score=100.78 Aligned_cols=109 Identities=21% Similarity=0.408 Sum_probs=71.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCc--eEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIR--SMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~--V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
+++||+|||||++|+++|..|++.|++ |+|+|+.+.+..... + +...+ .
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-----~----------l~~~~------------~-- 58 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP-----P----------LSKEY------------L-- 58 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG-----G----------GGTTT------------T--
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc-----c----------CCHHH------------H--
Confidence 358999999999999999999999987 999999865321100 0 00000 0
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCC
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGV 160 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 160 (409)
.+.. ... .. ... ..+.+.+ .+++++.+++|+.++.... .|++.++.++.+|.||.|+|.
T Consensus 59 -~~~~----~~~--------~~-~~~---~~~~~~~--~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 59 -AREK----TFE--------RI-CIR---PAQFWED--KAVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp -TTSS----CSG--------GG-BSS---CHHHHHH--TTEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCE
T ss_pred -cCCC----CHH--------Hh-ccC---CHHHHHH--CCcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCC
Confidence 0000 000 00 000 0122222 2789999999999976654 567788889999999999995
Q ss_pred c
Q 015303 161 N 161 (409)
Q Consensus 161 ~ 161 (409)
.
T Consensus 118 ~ 118 (415)
T 3lxd_A 118 D 118 (415)
T ss_dssp E
T ss_pred c
Confidence 4
No 128
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.89 E-value=1.4e-09 Score=102.91 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=72.1
Q ss_pred CCCcccEEEECCChHHHHHHHHHHH---cCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceee
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYR---LGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVA 77 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 77 (409)
|....||+|||||++|+++|..|++ .|++|+|||+++.... .+.... +. .+.
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~~~~~~----------~~-~g~------- 55 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------VPSNPW----------VG-VGW------- 55 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------GGGHHH----------HH-HTS-------
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------cCCccc----------cc-cCc-------
Confidence 5555799999999999999999999 8999999999874211 110000 00 000
Q ss_pred eecCCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEec
Q 015303 78 TPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGC 157 (409)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~A 157 (409)
.. ...+. . .+.+.+.+ .+++++ ..+|+.++.++. .|++.+++++.+|.||.|
T Consensus 56 ---~~---~~~~~--------------~---~l~~~~~~--~gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviA 107 (437)
T 3sx6_A 56 ---KE---RDDIA--------------F---PIRHYVER--KGIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIA 107 (437)
T ss_dssp ---SC---HHHHE--------------E---ECHHHHHT--TTCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEEC
T ss_pred ---cC---HHHHH--------------H---HHHHHHHH--CCCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEEC
Confidence 00 00000 0 01222222 267876 468999987665 577788888999999999
Q ss_pred CCCchHH
Q 015303 158 DGVNSIV 164 (409)
Q Consensus 158 dG~~S~v 164 (409)
+|..+..
T Consensus 108 tG~~~~~ 114 (437)
T 3sx6_A 108 TGPKLAF 114 (437)
T ss_dssp CCCEECG
T ss_pred CCCCcCc
Confidence 9986543
No 129
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.89 E-value=5.9e-09 Score=100.05 Aligned_cols=111 Identities=17% Similarity=0.134 Sum_probs=72.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcC---CceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLG---IRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g---~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
++||+||||||+|+++|..|++.| .+|+|||+++.....+++. .. .+ . +. .
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~-------~~--------~~-~-~~------~--- 88 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGM-------AL--------WI-G-EQ------I--- 88 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGH-------HH--------HH-T-TS------S---
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccccc-------ch--------hh-c-Cc------c---
Confidence 489999999999999999999988 9999999987543322211 00 00 0 00 0
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe-cCCcEEeccEEEecCC
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL-ADGTILKTKVLIGCDG 159 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~~~ad~vV~AdG 159 (409)
.. ...+.. -. .+.+. . .+++++.+++|+.++.+++.+.+.. .++.++++|.||.|+|
T Consensus 89 ~~---~~~~~~-------------~~----~~~~~-~-~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG 146 (490)
T 2bc0_A 89 AG---PEGLFY-------------SD----KEELE-S-LGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATG 146 (490)
T ss_dssp SC---SGGGBS-------------CC----HHHHH-H-TTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCC
T ss_pred CC---HHHhhh-------------cC----HHHHH-h-CCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCC
Confidence 00 000000 00 12222 2 2789999999999988777777652 2235799999999999
Q ss_pred Cch
Q 015303 160 VNS 162 (409)
Q Consensus 160 ~~S 162 (409)
...
T Consensus 147 ~~p 149 (490)
T 2bc0_A 147 SQP 149 (490)
T ss_dssp EEE
T ss_pred CCc
Confidence 654
No 130
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.88 E-value=4.9e-09 Score=99.66 Aligned_cols=33 Identities=24% Similarity=0.495 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
++||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 589999999999999999999999999999997
No 131
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.88 E-value=6e-09 Score=99.63 Aligned_cols=36 Identities=22% Similarity=0.552 Sum_probs=33.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+++||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999865
No 132
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.86 E-value=1.5e-08 Score=97.01 Aligned_cols=111 Identities=14% Similarity=0.186 Sum_probs=73.0
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+||+||||||+|+++|..|++. |.+|+|+|+.+......++. .. .+ . +
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~-------~~--------~~-~-~------------- 86 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGL-------PY--------VI-S-G------------- 86 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGH-------HH--------HH-T-T-------------
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCc-------ch--------hh-c-C-------------
Confidence 6999999999999999999996 89999999987643222211 00 00 0 0
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe-cCCc--EEeccEEEecCC
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~~~ad~vV~AdG 159 (409)
.. .+... .+.+ ..+.+.+. .+++++++++|+.++.+++.+.+.. .+|+ ++++|.||+|+|
T Consensus 87 -~~---~~~~~----------l~~~--~~~~~~~~-~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (480)
T 3cgb_A 87 -AI---ASTEK----------LIAR--NVKTFRDK-YGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATG 149 (480)
T ss_dssp -SS---SCGGG----------GBSS--CHHHHHHT-TCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred -Cc---CCHHH----------hhhc--CHHHHHhh-cCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCC
Confidence 00 00000 0000 01223222 3789999999999988777777765 4565 799999999999
Q ss_pred Cch
Q 015303 160 VNS 162 (409)
Q Consensus 160 ~~S 162 (409)
...
T Consensus 150 ~~p 152 (480)
T 3cgb_A 150 VRP 152 (480)
T ss_dssp EEE
T ss_pred Ccc
Confidence 654
No 133
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.86 E-value=1.2e-08 Score=97.35 Aligned_cols=36 Identities=22% Similarity=0.429 Sum_probs=34.6
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
|+.++||+||||||+|+++|..|++.|++|+|+|++
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 777899999999999999999999999999999987
No 134
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.85 E-value=1.7e-08 Score=93.46 Aligned_cols=107 Identities=19% Similarity=0.226 Sum_probs=71.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
+.+|+|||||+||+++|..|++.+.+|+|||+.+...... + .+...+. .....
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~------~---------~l~~~l~-g~~~~----------- 61 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYR------P---------RLNEIIA-KNKSI----------- 61 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCG------G---------GHHHHHH-SCCCG-----------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCccc------C---------hhhHHHc-CCCCH-----------
Confidence 5799999999999999999988899999999987633111 1 0111010 00000
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
..+. .. ..+++.+ .+++++++++|++++.++. +|++.+|+++.+|.||.|+|..
T Consensus 62 ---~~l~--------------~~---~~~~~~~--~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 62 ---DDIL--------------IK---KNDWYEK--NNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp ---GGTB--------------SS---CHHHHHH--TTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred ---HHcc--------------CC---CHHHHHH--CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCC
Confidence 0000 00 0122222 2789999999999987665 5677888899999999999963
No 135
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.85 E-value=1e-08 Score=101.38 Aligned_cols=36 Identities=22% Similarity=0.430 Sum_probs=33.0
Q ss_pred cccEEEECCChHHHHHHHHHH---H-cCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLY---R-LGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~---~-~g~~V~v~E~~~~~ 39 (409)
++||+|||||+|||++|+.|+ + .|.+|+|+||....
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 489999999999999999999 6 89999999998753
No 136
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.84 E-value=1.1e-08 Score=97.25 Aligned_cols=110 Identities=14% Similarity=0.242 Sum_probs=71.0
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+||+|||||++|+++|..|++. |.+|+|||+++.+....++.... +...+ .. .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~-----------~~~~~------------~~--~ 57 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAY-----------FNHTI------------NE--L 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhh-----------hcCCC------------CC--H
Confidence 5999999999999999999998 89999999987643221111000 00000 00 0
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe-cCCcEEeccEEEecCCCc
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL-ADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~~~ad~vV~AdG~~ 161 (409)
..+. .... +.+.+ .+++++++++|+.++..+..+.+.. .++.++.+|.||.|+|..
T Consensus 58 ----~~~~-------------~~~~----~~~~~--~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~ 114 (452)
T 3oc4_A 58 ----HEAR-------------YITE----EELRR--QKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGAS 114 (452)
T ss_dssp -------C-------------CCCH----HHHHH--TTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCC
T ss_pred ----HHhh-------------cCCH----HHHHH--CCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcc
Confidence 0000 0011 22222 2788999999999998888777762 244579999999999974
Q ss_pred h
Q 015303 162 S 162 (409)
Q Consensus 162 S 162 (409)
.
T Consensus 115 p 115 (452)
T 3oc4_A 115 Q 115 (452)
T ss_dssp B
T ss_pred c
Confidence 3
No 137
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.83 E-value=5e-09 Score=99.62 Aligned_cols=35 Identities=26% Similarity=0.561 Sum_probs=32.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++||+||||||+|+++|..|++.|++|+|+|+++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 37999999999999999999999999999999865
No 138
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.82 E-value=1.5e-06 Score=86.31 Aligned_cols=36 Identities=25% Similarity=0.622 Sum_probs=33.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.+
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 479999999999999999999999999999998654
No 139
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.82 E-value=3.6e-08 Score=92.86 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=35.9
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
|++.+||+|||+|++|+++|..|++.|++|+|+|+++..
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYY 55 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 556799999999999999999999999999999998754
No 140
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.82 E-value=6.6e-09 Score=99.18 Aligned_cols=35 Identities=26% Similarity=0.533 Sum_probs=33.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999865
No 141
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.82 E-value=1.7e-08 Score=99.26 Aligned_cols=111 Identities=21% Similarity=0.229 Sum_probs=73.1
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++||+|||||++|+++|..|++. |++|+|||+++......++ ++..+. +. ..
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~---------------lp~~~~--g~------~~--- 89 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCG---------------LPYYIG--GV------IT--- 89 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGG---------------HHHHHT--TS------SC---
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCC---------------Cchhhc--Cc------CC---
Confidence 47999999999999999999998 8999999998764322111 110000 00 00
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe-cCCc--EEeccEEEecC
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCD 158 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~~~ad~vV~Ad 158 (409)
. . ... + ...+ +.+.+.. +++++++++|+.++.++..+.+.. .+++ ++.+|.||.|+
T Consensus 90 ~--~-~~~---------------~-~~~~-~~~~~~~-gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAt 148 (588)
T 3ics_A 90 E--R-QKL---------------L-VQTV-ERMSKRF-NLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSP 148 (588)
T ss_dssp C--G-GGG---------------B-SSCH-HHHHHHT-TCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred C--h-HHh---------------h-ccCH-HHHHHhc-CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECC
Confidence 0 0 000 0 0011 2222232 788999999999998888877765 3455 68999999999
Q ss_pred CCc
Q 015303 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 149 G~~ 151 (588)
T 3ics_A 149 GAK 151 (588)
T ss_dssp CEE
T ss_pred CCC
Confidence 964
No 142
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.81 E-value=2.5e-08 Score=98.29 Aligned_cols=36 Identities=14% Similarity=0.338 Sum_probs=33.2
Q ss_pred cccEEEECCChHHHHHHHHHHHc------CCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL------GIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~------g~~V~v~E~~~~~ 39 (409)
++||+|||||+|||++|+.|++. |.+|+|+||....
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 48999999999999999999998 9999999998653
No 143
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.81 E-value=4.5e-08 Score=93.48 Aligned_cols=55 Identities=11% Similarity=0.091 Sum_probs=45.9
Q ss_pred HHHHHHHHhhCC----------CceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch
Q 015303 108 KLLLETLAKELP----------SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 108 ~~l~~~L~~~~~----------~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
..+.+.|.+.+. +++|+++++|++|..++++++|++.+|++++||.||.|.+.+.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHH
Confidence 356666766652 4689999999999998888999999998999999999999654
No 144
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.81 E-value=3.5e-08 Score=92.40 Aligned_cols=106 Identities=16% Similarity=0.272 Sum_probs=70.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCc--eEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIR--SMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~--V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.+|+|||||++|+++|..|++.|++ |+|+|+.+....... + +...+.......
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~-----~----------l~~~~~~g~~~~---------- 57 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP-----S----------LSKAVLDGSLER---------- 57 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG-----G----------GGTHHHHTSSSS----------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc-----c----------ccHHHhCCCCCH----------
Confidence 4999999999999999999999987 999999876321100 0 111110000000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
..+ +. . .+++.+ .+++++.+++|+.++.... .|++.+++++.+|.||.|+|..
T Consensus 58 ----~~~-~~-------------~----~~~~~~--~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 58 ----PPI-LA-------------E----ADWYGE--ARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp ----CCB-SS-------------C----TTHHHH--TTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred ----HHh-cC-------------C----HHHHHH--CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 000 00 0 011222 2789999999999987654 5677888899999999999965
No 145
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.80 E-value=1e-08 Score=98.11 Aligned_cols=36 Identities=22% Similarity=0.531 Sum_probs=33.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|||+||||||+|+++|+.|++.|++|+|+|+++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 469999999999999999999999999999999864
No 146
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.79 E-value=1e-08 Score=95.18 Aligned_cols=111 Identities=14% Similarity=0.216 Sum_probs=66.3
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcC--CceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeee
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLG--IRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVAT 78 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g--~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|+.++||+||||||+|+++|..|++.| .+|+|+|++....... + . +. .. .
T Consensus 1 M~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~------~----~-----l~-----~~--------~ 52 (384)
T 2v3a_A 1 MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSK------P----M-----LS-----TG--------F 52 (384)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECG------G----G-----GG-----GT--------T
T ss_pred CCCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCc------c----c-----cc-----HH--------H
Confidence 667799999999999999999999999 4689999875211000 0 0 00 00 0
Q ss_pred ecCCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecC
Q 015303 79 PTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
..+.. .. .+....+.+ +.+.. +++++.+++++.++..+.. |++.+ .++.+|.||.|+
T Consensus 53 --~~~~~-----~~-----------~~~~~~~~~-~~~~~-~v~~~~~~~v~~i~~~~~~--v~~~~-~~~~~d~lviAt 109 (384)
T 2v3a_A 53 --SKNKD-----AD-----------GLAMAEPGA-MAEQL-NARILTHTRVTGIDPGHQR--IWIGE-EEVRYRDLVLAW 109 (384)
T ss_dssp --TTTCC-----HH-----------HHEEECHHH-HHHHT-TCEEECSCCCCEEEGGGTE--EEETT-EEEECSEEEECC
T ss_pred --hCCCC-----HH-----------HhhccCHHH-HHHhC-CcEEEeCCEEEEEECCCCE--EEECC-cEEECCEEEEeC
Confidence 00000 00 000001112 22222 7889999999998876554 44444 469999999999
Q ss_pred CCch
Q 015303 159 GVNS 162 (409)
Q Consensus 159 G~~S 162 (409)
|...
T Consensus 110 G~~p 113 (384)
T 2v3a_A 110 GAEP 113 (384)
T ss_dssp CEEE
T ss_pred CCCc
Confidence 9754
No 147
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.78 E-value=3.1e-08 Score=94.35 Aligned_cols=44 Identities=9% Similarity=0.062 Sum_probs=37.6
Q ss_pred CCceEEeCCeEEEEEEeCCe-EEEE-ecCCcEEeccEEEecCCCchH
Q 015303 119 PSGTIRYSSQVVSIEESGHF-KLLH-LADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 119 ~~~~i~~~~~v~~i~~~~~~-v~v~-~~~g~~~~ad~vV~AdG~~S~ 163 (409)
.+++++.+++|+.++.++++ +.|+ +.+|+ +.+|.||.|.|....
T Consensus 224 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 224 KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 37899999999999887655 6788 88887 999999999998654
No 148
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.77 E-value=4.9e-08 Score=91.31 Aligned_cols=105 Identities=16% Similarity=0.221 Sum_probs=69.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++||+|||||++|+++|..|++.|. +|+|+|+.+....... + +...+..... .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-----~----------~~~~~~~~~~-~--------- 61 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP-----P----------LSKDFMAHGD-A--------- 61 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG-----G----------GGTHHHHHCC-G---------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC-----C----------CCHHHhCCCc-h---------
Confidence 5899999999999999999999998 4999999865321110 0 0000100000 0
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
..+ .+. . .+. .+++++.+++|+.++.+.. +|++.+++++.+|.||.|+|..
T Consensus 62 -----~~~--------------~~~------~-~~~-~~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 62 -----EKI--------------RLD------C-KRA-PEVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp -----GGS--------------BCC------C-TTS-CSCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred -----hhh--------------hHH------H-HHH-CCCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCC
Confidence 000 000 1 111 2689999999999976544 5667788889999999999975
Q ss_pred h
Q 015303 162 S 162 (409)
Q Consensus 162 S 162 (409)
.
T Consensus 113 ~ 113 (408)
T 2gqw_A 113 P 113 (408)
T ss_dssp E
T ss_pred C
Confidence 4
No 149
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.77 E-value=5.4e-08 Score=90.33 Aligned_cols=108 Identities=18% Similarity=0.224 Sum_probs=80.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~---------------------------------------- 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL---------------------------------------- 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc----------------------------------------
Confidence 3589999999999999999999999999999876522200
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
. + . --...+.+.+.+ .+++++++++|++++.+++.+.+++.+|+++.+|.||.|+|..+.
T Consensus 185 -----~--~-------~----~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 185 -----L--H-------P----AAAKAVQAGLEG--LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp -----S--C-------H----HHHHHHHHHHHT--TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred -----c--C-------H----HHHHHHHHHHHH--cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 0 0 0 001233444433 389999999999999888888899999989999999999998765
Q ss_pred H--HhhhCCC
Q 015303 164 V--AKWLGFK 171 (409)
Q Consensus 164 v--r~~l~~~ 171 (409)
. .+.++..
T Consensus 245 ~~l~~~~g~~ 254 (384)
T 2v3a_A 245 TELAFAAGLA 254 (384)
T ss_dssp CHHHHHTTCC
T ss_pred HHHHHHCCCC
Confidence 3 3334443
No 150
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.76 E-value=1e-08 Score=95.94 Aligned_cols=106 Identities=21% Similarity=0.305 Sum_probs=68.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.||+|||||++|+++|..|++.|+ +|+|||+.+....... + +...+ .....
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-----~----------l~~~~------------l~~~~ 54 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP-----P----------LSKAY------------LKSGG 54 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG-----G----------GGTGG------------GGSCC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc-----c----------CCHHH------------HCCCC
Confidence 589999999999999999999998 8999999874321100 0 00000 00000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
. . ..+. .. ..+.+.+ .+++++. ++|+.++.... .+++.++.++.+|.||.|+|..
T Consensus 55 ~-~-~~~~--------------~~---~~~~~~~--~~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 55 D-P-NSLM--------------FR---PEKFFQD--QAIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp C-T-TSSB--------------SS---CHHHHHH--TTEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCEE
T ss_pred C-H-HHcc--------------CC---CHHHHHh--CCCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCCC
Confidence 0 0 0000 00 1122222 2788888 99999987665 5677888899999999999964
No 151
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.76 E-value=4.4e-08 Score=92.87 Aligned_cols=110 Identities=12% Similarity=0.147 Sum_probs=71.6
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+||+|||||++|+++|..|++. |.+|+|+|+.+.....+++. .. .+ .+. . ..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~-------~~--------~~--~~~-~--------~~ 54 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGM-------QL--------YL--EGK-V--------KD 54 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGH-------HH--------HH--TTS-S--------CC
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccc-------hh--------hh--cCc-c--------CC
Confidence 3899999999999999999998 99999999987643222211 00 00 000 0 00
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe-cCCc--EEeccEEEecCC
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~~~ad~vV~AdG 159 (409)
...+. . .+.+.+.+ . +++++.+++++.++.+++.+.+.. .+|+ ++++|.||.|+|
T Consensus 55 ---~~~~~--------~---------~~~~~~~~-~-gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG 112 (447)
T 1nhp_A 55 ---VNSVR--------Y---------MTGEKMES-R-GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPG 112 (447)
T ss_dssp ---GGGSB--------S---------CCHHHHHH-T-TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ---HHHhh--------c---------CCHHHHHH-C-CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCC
Confidence 00000 0 01123322 2 789999999999988777777765 3454 489999999999
Q ss_pred Cch
Q 015303 160 VNS 162 (409)
Q Consensus 160 ~~S 162 (409)
...
T Consensus 113 ~~p 115 (447)
T 1nhp_A 113 AVP 115 (447)
T ss_dssp EEE
T ss_pred CCc
Confidence 653
No 152
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.76 E-value=3.2e-08 Score=93.97 Aligned_cols=112 Identities=12% Similarity=0.091 Sum_probs=71.4
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+||+|||||++|+++|..|++. |.+|+|+|+++.....+++. . ..+ .+. ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~-------~--------~~~--~g~-~~--------- 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGI-------A--------LYL--GKE-IK--------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGH-------H--------HHH--TTC-BG---------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccc-------h--------hhh--cCC-cc---------
Confidence 5899999999999999999998 99999999987543222211 0 000 000 00
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec-C--CcEEeccEEEecCC
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA-D--GTILKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~--g~~~~ad~vV~AdG 159 (409)
..+.... .. .+.+.+.+ .+++++.+++++.++.+++.+.+... + +.++++|.||.|+|
T Consensus 54 -----~~~~~~~---------~~---~~~~~~~~--~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 114 (452)
T 2cdu_A 54 -----NNDPRGL---------FY---SSPEELSN--LGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTG 114 (452)
T ss_dssp -----GGCGGGG---------BS---CCHHHHHH--TTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred -----cCCHHHh---------hh---cCHHHHHH--cCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccC
Confidence 0000000 00 01122222 27899999999999877777777542 2 35799999999999
Q ss_pred Cch
Q 015303 160 VNS 162 (409)
Q Consensus 160 ~~S 162 (409)
...
T Consensus 115 s~p 117 (452)
T 2cdu_A 115 SKP 117 (452)
T ss_dssp EEE
T ss_pred CCc
Confidence 654
No 153
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.76 E-value=2.4e-08 Score=96.43 Aligned_cols=35 Identities=29% Similarity=0.452 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 46899999999999999999999999999999864
No 154
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.74 E-value=2.2e-08 Score=96.09 Aligned_cols=135 Identities=12% Similarity=0.137 Sum_probs=74.6
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeee
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVAT 78 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|+.++||+|||||+||+++|..|++. |.+|+|||+.+......+. ++. .++. +...... ....+.
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~--lsk---~l~~--~~~~~~~------~~~~~~ 74 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPP--LSK---ELWF--SDDPNVT------KTLRFK 74 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGG--GGT---GGGC--C--CTHH------HHCEEE
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCC--CCH---Hhhc--CCccchh------hccccc
Confidence 45678999999999999999999887 8899999998754321110 000 0000 0000000 000111
Q ss_pred ecCCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecC
Q 015303 79 PTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCD 158 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 158 (409)
.+.... ..+.+... .. ......+.+ ..-.+++++.+++|+.++.... +|++.+|+++.+|.||.|+
T Consensus 75 ~~~~~~--~~~~~~~~------~~-~~~~~~l~~---~~~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviAT 140 (493)
T 1m6i_A 75 QWNGKE--RSIYFQPP------SF-YVSAQDLPH---IENGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIAT 140 (493)
T ss_dssp CTTSCE--EESBSSCG------GG-SBCTTTTTT---STTCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECC
T ss_pred cccccc--ccccccch------Hh-hcchhhhhh---hhcCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECC
Confidence 000000 00111100 00 011111110 0113689999999999987655 5667888889999999999
Q ss_pred CCch
Q 015303 159 GVNS 162 (409)
Q Consensus 159 G~~S 162 (409)
|...
T Consensus 141 Gs~p 144 (493)
T 1m6i_A 141 GGTP 144 (493)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9754
No 155
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.73 E-value=1.4e-08 Score=95.16 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=31.8
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYR---LGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~---~g~~V~v~E~~~~ 38 (409)
.||+|||||++|+++|..|++ .|++|+|+|+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 489999999999999999999 8999999999873
No 156
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.73 E-value=4.8e-08 Score=89.96 Aligned_cols=104 Identities=14% Similarity=0.132 Sum_probs=67.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
-||+||||||||+++|..|++.| +|+|+|+++...... + .+ . ..+ . + .
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~------~-~l---~-----~~~-~-g--------------~ 56 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSK------P-ML---S-----HYI-A-G--------------F 56 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCS------T-TH---H-----HHH-T-T--------------S
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcccc------c-hh---H-----HHH-h-C--------------C
Confidence 59999999999999999999999 999999987532110 0 00 0 000 0 0 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.+.... ... ..+++.+. +++++.+++|+.++.+.. +|+ .+++++++|.||.|+|..
T Consensus 57 ----~~~~~~---------~~~---~~~~~~~~--~v~~~~g~~v~~id~~~~--~V~-~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 57 ----IPRNRL---------FPY---SLDWYRKR--GIEIRLAEEAKLIDRGRK--VVI-TEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp ----SCGGGG---------CSS---CHHHHHHH--TEEEECSCCEEEEETTTT--EEE-ESSCEEECSEEEECCCEE
T ss_pred ----CCHHHh---------ccC---CHHHHHhC--CcEEEECCEEEEEECCCC--EEE-ECCcEEECCEEEECCCCC
Confidence 000000 000 11222222 789999999999876543 455 677789999999999964
No 157
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.73 E-value=7e-08 Score=93.28 Aligned_cols=37 Identities=24% Similarity=0.309 Sum_probs=34.2
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+.++||+|||||++|+++|..|++.|++|+|||++..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4568999999999999999999999999999999864
No 158
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.73 E-value=3e-08 Score=95.23 Aligned_cols=58 Identities=14% Similarity=0.098 Sum_probs=45.3
Q ss_pred eccHHHHHHHHHhhCC--CceEEeCCeEEEEEEeC--------CeEEEEecCCc-----EEeccEEEecCCCc
Q 015303 104 CVRRKLLLETLAKELP--SGTIRYSSQVVSIEESG--------HFKLLHLADGT-----ILKTKVLIGCDGVN 161 (409)
Q Consensus 104 ~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~--------~~v~v~~~~g~-----~~~ad~vV~AdG~~ 161 (409)
...|.++.++|...+. +..|+|+++|++++..+ +.|+|++.++. ++.|+.||.|+|..
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC
Confidence 4778899998876553 35699999999998754 24888887652 68999999999953
No 159
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.72 E-value=1.4e-08 Score=97.60 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHc---CCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL---GIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~---g~~V~v~E~~~ 37 (409)
++||+||||||+|+++|..|++. |++|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 99999999986
No 160
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.71 E-value=2.5e-08 Score=95.35 Aligned_cols=36 Identities=17% Similarity=0.424 Sum_probs=32.9
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+.++||+||||||+|+++|..|++.|++|+|+|++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 346899999999999999999999999999999974
No 161
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.71 E-value=6.1e-08 Score=91.31 Aligned_cols=104 Identities=15% Similarity=0.230 Sum_probs=66.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcC--CceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLG--IRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g--~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.+|+|||||+||+++|..|++.+ ++|+|||+++... +.|....+.. |. .....
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~--g~--------~~~~~-------- 57 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAM--GW--------RKFED-------- 57 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHH--TC--------SCGGG--------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhc--CC--------CCHHH--------
Confidence 37999999999999999999876 7899999886421 1221111000 00 00000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
+..+ +.+.+ ++ .+++++.+ +|+.|+.++. +|++++|+++.+|+||.|+|..
T Consensus 58 ------i~~~-----------------~~~~~-~~-~gv~~i~~-~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 58 ------ISVP-----------------LAPLL-PK-FNIEFINE-KAESIDPDAN--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp ------SEEE-----------------STTTG-GG-GTEEEECS-CEEEEETTTT--EEEETTCCEEECSEEEECCCCE
T ss_pred ------hhhc-----------------HHHHH-HH-CCcEEEEe-EEEEEECCCC--EEEECCCCEEECCEEEEeCCCC
Confidence 0000 00111 11 16777765 7999987666 5678899999999999999974
No 162
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.70 E-value=8.8e-08 Score=90.32 Aligned_cols=105 Identities=15% Similarity=0.254 Sum_probs=67.3
Q ss_pred ccEEEECCChHHHHHHHHHHH--cCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYR--LGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~--~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.||+|||||++|+++|..|++ .|++|+|||+++.... .+. ... +.........
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~-------~~~-~~~---------~~~g~~~~~~-------- 57 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF-------TPA-FPH---------LAMGWRKFED-------- 57 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC-------GGG-HHH---------HHHTCSCGGG--------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc-------CCC-cch---------hccCccCHHH--------
Confidence 599999999999999999999 7899999999865321 110 000 0000000000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
+... +.+.+.+ .+++++. .+|+.++.++. .|++.+++++.+|.||.|+|...
T Consensus 58 ------~~~~-----------------~~~~~~~--~gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 58 ------ISVP-----------------LAPLLPK--FNIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp ------SEEE-----------------STTTGGG--GTEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred ------HHHH-----------------HHHHHHh--cCCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCccc
Confidence 0000 0011111 2677776 48888876655 56778888899999999999764
No 163
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.69 E-value=1.1e-07 Score=91.54 Aligned_cols=52 Identities=12% Similarity=0.270 Sum_probs=41.7
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCc----EEeccEEEecCCCc
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGT----ILKTKVLIGCDGVN 161 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~----~~~ad~vV~AdG~~ 161 (409)
.|.+.|.+.++. +|+++++|++|+.+++++.|++.+++ +++||.||.|.+..
T Consensus 242 ~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 455555555533 89999999999998888999887765 48999999999965
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.69 E-value=1.5e-07 Score=89.37 Aligned_cols=99 Identities=21% Similarity=0.315 Sum_probs=77.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+. ...
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------~~~--------------------- 208 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT------------------MDL--------------------- 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc------------------cCH---------------------
Confidence 57999999999999999999999999999988653110 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 164 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 164 (409)
. -...+.+.+.+. +++++++++|+.++.+++.+.+++.+++++.+|.||.|+|..+..
T Consensus 209 -----~---------------~~~~l~~~l~~~--Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 209 -----E---------------VSRAAERVFKKQ--GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp -----H---------------HHHHHHHHHHHH--TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred -----H---------------HHHHHHHHHHHC--CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 0 012233444443 799999999999998888888888888889999999999987654
No 165
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.69 E-value=8.1e-08 Score=93.93 Aligned_cols=110 Identities=16% Similarity=0.261 Sum_probs=71.1
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.||+||||||||+++|..|++. |++|+|+|+.+.+....++ +...+. +. . ..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~---------------l~~~~~--~~------~---~~ 55 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCG---------------LPYHIS--GE------I---AQ 55 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGG---------------HHHHHT--SS------S---CC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccC---------------chHHhc--CC------c---CC
Confidence 4899999999999999999998 7899999999764322111 110000 00 0 00
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe-cCCc--EEeccEEEecCC
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~~~ad~vV~AdG 159 (409)
. ... ... . .+.+.+.. +++++++++|++++.++..+.+.. .++. ++.+|.||.|+|
T Consensus 56 --~-~~~--------------~~~--~-~~~~~~~~-~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG 114 (565)
T 3ntd_A 56 --R-SAL--------------VLQ--T-PESFKARF-NVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPG 114 (565)
T ss_dssp --G-GGG--------------BCC--C-HHHHHHHH-CCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred --h-HHh--------------hcc--C-HHHHHHhc-CcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCC
Confidence 0 000 000 0 12222221 788999999999998888777765 2343 789999999999
Q ss_pred Cc
Q 015303 160 VN 161 (409)
Q Consensus 160 ~~ 161 (409)
..
T Consensus 115 ~~ 116 (565)
T 3ntd_A 115 AA 116 (565)
T ss_dssp EE
T ss_pred CC
Confidence 74
No 166
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.69 E-value=3.2e-08 Score=94.25 Aligned_cols=34 Identities=24% Similarity=0.610 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++||+||||||+|+++|..|++.|++|+|+|+++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999976
No 167
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.67 E-value=1.4e-07 Score=89.70 Aligned_cols=99 Identities=18% Similarity=0.215 Sum_probs=75.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... ...
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~--------------------- 210 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------GDP--------------------- 210 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCH---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------cCH---------------------
Confidence 58999999999999999999999999999987653211 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec-C--Cc--EEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA-D--GT--ILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~--g~--~~~ad~vV~AdG 159 (409)
--...+.+.|.+ .+++++++++|+.++.+++.+.+++. + |+ ++.+|.||.|+|
T Consensus 211 --------------------~~~~~l~~~l~~--~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G 268 (464)
T 2eq6_A 211 --------------------ETAALLRRALEK--EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVG 268 (464)
T ss_dssp --------------------HHHHHHHHHHHH--TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSC
T ss_pred --------------------HHHHHHHHHHHh--cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCC
Confidence 001233444443 28999999999999988877888876 6 76 799999999999
Q ss_pred CchHH
Q 015303 160 VNSIV 164 (409)
Q Consensus 160 ~~S~v 164 (409)
..+..
T Consensus 269 ~~p~~ 273 (464)
T 2eq6_A 269 RKPRT 273 (464)
T ss_dssp EEESC
T ss_pred cccCC
Confidence 87654
No 168
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.66 E-value=6.1e-08 Score=92.25 Aligned_cols=37 Identities=27% Similarity=0.435 Sum_probs=34.0
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|++++||+||||||+|+++|..|++.|++|+|+|++.
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 6677999999999999999999999999999999973
No 169
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.63 E-value=6.9e-07 Score=87.79 Aligned_cols=40 Identities=30% Similarity=0.370 Sum_probs=34.4
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLR 40 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
|+.++||+|||||++|+++|+.|+++|++|+|+|+.+...
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 3456899999999999999999999999999999987543
No 170
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.61 E-value=2.8e-07 Score=87.29 Aligned_cols=99 Identities=19% Similarity=0.201 Sum_probs=76.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... +.+ .
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~-------------~-------------------- 209 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-----FDP-------------M-------------------- 209 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SCH-------------H--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-----hhH-------------H--------------------
Confidence 58999999999999999999999999999987542110 000 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCe-EEEEecCCcEEeccEEEecCCCchH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
-...+.+.|.+. +++++++++|++++.++++ +.+++.+|+++.+|.||.|+|..+.
T Consensus 210 ---------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 210 ---------------------ISETLVEVMNAE--GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp ---------------------HHHHHHHHHHHH--SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred ---------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 012334444443 7999999999999876544 7888889988999999999998765
Q ss_pred H
Q 015303 164 V 164 (409)
Q Consensus 164 v 164 (409)
.
T Consensus 267 ~ 267 (450)
T 1ges_A 267 N 267 (450)
T ss_dssp C
T ss_pred C
Confidence 4
No 171
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.61 E-value=7.6e-08 Score=92.05 Aligned_cols=35 Identities=31% Similarity=0.537 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++||+||||||+|+++|..|++.|++|+|+|++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 46899999999999999999999999999999763
No 172
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.60 E-value=5.4e-08 Score=93.31 Aligned_cols=108 Identities=19% Similarity=0.353 Sum_probs=72.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|..|++. ++|+|+|+++.+... +.. ... .. .+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~-----~~~-----------------~~~-----~~----~g 155 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGD-----MWL-----------------KGI-----KQ----EG 155 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCS-----GGG-----------------TCS-----EE----TT
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCe-----eec-----------------ccc-----cc----CC
Confidence 47999999999999999999999 999999998753211 000 000 00 00
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhC-CCceEEeCCeEEEEEEeCCeEEEEe-cCCc--EEeccEEEecCC
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKEL-PSGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDG 159 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~-~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~~~ad~vV~AdG 159 (409)
++ . ...++...+.+.+ .+++++++++|.++..++..+.+.. .+++ .+.+|.||.|+|
T Consensus 156 -------~~---------~---~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtG 216 (493)
T 1y56_A 156 -------FN---------K---DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATG 216 (493)
T ss_dssp -------TT---------E---EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCC
T ss_pred -------CC---------C---CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCC
Confidence 00 0 1223444444433 3678899999999988776665544 4443 689999999999
Q ss_pred Cch
Q 015303 160 VNS 162 (409)
Q Consensus 160 ~~S 162 (409)
...
T Consensus 217 a~~ 219 (493)
T 1y56_A 217 AID 219 (493)
T ss_dssp EEE
T ss_pred CCc
Confidence 754
No 173
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.60 E-value=9.9e-08 Score=95.35 Aligned_cols=37 Identities=30% Similarity=0.430 Sum_probs=33.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.++||+||||||+|+++|..|+++|++|+|+|+++..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3579999999999999999999999999999998643
No 174
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.58 E-value=2.2e-07 Score=89.01 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
.+|||+||||||+|+++|..|++.|++|+|+||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4689999999999999999999999999999964
No 175
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.58 E-value=6e-08 Score=87.87 Aligned_cols=37 Identities=32% Similarity=0.557 Sum_probs=33.1
Q ss_pred cccEEEECCChHHHHHHHHHHH--cCCceEEEeCCCCcC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYR--LGIRSMVLESSESLR 40 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~--~g~~V~v~E~~~~~~ 40 (409)
.+||+||||||||+++|+.|++ .|++|+||||++.+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 4799999999999999999985 499999999987653
No 176
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.58 E-value=5.7e-07 Score=85.53 Aligned_cols=99 Identities=20% Similarity=0.215 Sum_probs=76.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+-.. +...+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~~------------------- 209 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------FDPLL------------------- 209 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHHH-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------cCHHH-------------------
Confidence 47999999999999999999999999999987542110 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCc-EEeccEEEecCCCchH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGT-ILKTKVLIGCDGVNSI 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~-~~~ad~vV~AdG~~S~ 163 (409)
...+.+.|.+. +++++++++|+.++.+++++.+++.+|+ ++.+|.||.|+|..+.
T Consensus 210 ----------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 210 ----------------------SATLAENMHAQ--GIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEES
T ss_pred ----------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 01233444433 7999999999999988777889999998 8999999999998754
Q ss_pred H
Q 015303 164 V 164 (409)
Q Consensus 164 v 164 (409)
.
T Consensus 266 ~ 266 (463)
T 2r9z_A 266 T 266 (463)
T ss_dssp C
T ss_pred C
Confidence 3
No 177
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.58 E-value=8.6e-08 Score=91.91 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|||+||||||+|+++|..|++.|++|+|+||.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 46899999999999999999999999999999843
No 178
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.56 E-value=1.5e-07 Score=90.11 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=31.1
Q ss_pred CcccEEEECCChHHHHHHHHHHH-cCCceEEEeC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYR-LGIRSMVLES 35 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~-~g~~V~v~E~ 35 (409)
.++||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 46899999999999999999999 9999999993
No 179
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.54 E-value=5.8e-07 Score=84.73 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=68.8
Q ss_pred cEEEECCChHHHHHHHHHHHcC--CceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLG--IRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g--~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
+|+||||||||+++|..|++.| .+|+|||+++......+.+ . .+.... . .
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l-------~---------~~~~~~-------~----~- 53 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCAL-------P---------YVIGEV-------V----E- 53 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGH-------H---------HHHTTS-------S----C-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchh-------H---------HHHcCC-------c----c-
Confidence 6999999999999999999988 4799999986532211110 0 000000 0 0
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecC---CcEEeccEEEecCCC
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD---GTILKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~---g~~~~ad~vV~AdG~ 160 (409)
.....+ ......+ .++ .+++++.+++|+.++.....+.+.... +.++.+|.||.|+|.
T Consensus 54 ~~~~~~--------------~~~~~~~----~~~-~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 54 DRRYAL--------------AYTPEKF----YDR-KQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGA 114 (437)
T ss_dssp CGGGTB--------------CCCHHHH----HHH-HCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCE
T ss_pred chhhhh--------------hcCHHHH----HHh-cCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCC
Confidence 000000 0111122 222 178899999999998877776665543 236889999999997
Q ss_pred ch
Q 015303 161 NS 162 (409)
Q Consensus 161 ~S 162 (409)
..
T Consensus 115 ~p 116 (437)
T 4eqs_A 115 SA 116 (437)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.50 E-value=6.7e-07 Score=84.69 Aligned_cols=99 Identities=17% Similarity=0.257 Sum_probs=71.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.... +
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~---------------------- 189 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY-----------------L---------------------- 189 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------C----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc-----------------C----------------------
Confidence 4689999999999999999999999999999886432110 0
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
+ . --...+.+.+.+ .+++++++++|++++.++..+.+.+ ++.++.+|.||.|+|....
T Consensus 190 --------~-------~----~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 190 --------D-------K----EFTDVLTEEMEA--NNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp --------C-------H----HHHHHHHHHHHT--TTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred --------C-------H----HHHHHHHHHHHh--CCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 0 0 001233344433 3799999999999987632234555 5567999999999997654
No 181
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=2e-07 Score=88.51 Aligned_cols=34 Identities=24% Similarity=0.500 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
.++||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 3589999999999999999999999999999994
No 182
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.50 E-value=8e-07 Score=82.91 Aligned_cols=104 Identities=17% Similarity=0.230 Sum_probs=65.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcC--CceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLG--IRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTIS 82 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g--~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.+|+|||||+||+++|..|++.+ .+|+|||+++.... .|. +..+.......
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~-------~p~----------~~~v~~g~~~~---------- 55 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT-------CYM----------SNEVIGGDREL---------- 55 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC-------STT----------HHHHHHTSSCG----------
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC-------ccC----------HHHHhcCCCCH----------
Confidence 47999999999999999999876 58999998764211 110 00110000000
Q ss_pred CCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch
Q 015303 83 GKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
..+. .... .+.+ .+++++.+ +|+.|+.+.. .+++.+|.++.+|.||.|+|...
T Consensus 56 ----~~~~--------------~~~~----~~~~--~gv~~i~~-~v~~id~~~~--~v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 56 ----ASLR--------------VGYD----GLRA--HGIQVVHD-SALGIDPDKK--LVKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp ----GGGE--------------ECSH----HHHH--TTCEEECS-CEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred ----HHHh--------------hCHH----HHHH--CCCEEEEe-EEEEEEccCc--EEEecccceeecceeeeccCCcc
Confidence 0000 0011 1222 26777654 7888877655 56778888999999999999754
No 183
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.50 E-value=2.2e-07 Score=83.96 Aligned_cols=34 Identities=35% Similarity=0.589 Sum_probs=32.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+||+|||||+||+.+|+.|++.|++|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 5999999999999999999999999999998763
No 184
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.50 E-value=1.1e-07 Score=90.11 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=35.3
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
+.++||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHY 46 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 35689999999999999999999999999999999865
No 185
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=7.6e-07 Score=84.54 Aligned_cols=98 Identities=12% Similarity=0.205 Sum_probs=73.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~--------------------- 211 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------FEK--------------------- 211 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------cCH---------------------
Confidence 58999999999999999999999999999987653100 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec---CCcEEeccEEEecCCCc
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA---DGTILKTKVLIGCDGVN 161 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g~~~~ad~vV~AdG~~ 161 (409)
--...+.+.|.+. +++++++++|+.++.+++.+.+++. ++.++.+|.||.|+|..
T Consensus 212 --------------------~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 212 --------------------QMAAIIKKRLKKK--GVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp --------------------HHHHHHHHHHHHT--TCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred --------------------HHHHHHHHHHHHC--CCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 0012333444433 8999999999999988777777765 44579999999999976
Q ss_pred hH
Q 015303 162 SI 163 (409)
Q Consensus 162 S~ 163 (409)
..
T Consensus 270 p~ 271 (455)
T 1ebd_A 270 PN 271 (455)
T ss_dssp ES
T ss_pred cc
Confidence 54
No 186
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.47 E-value=4.1e-07 Score=87.18 Aligned_cols=35 Identities=9% Similarity=0.184 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+.+|||||||+||+.+|..|++.+++|+|||+++.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 45799999999999999999999999999998854
No 187
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.46 E-value=9.1e-08 Score=92.42 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=41.3
Q ss_pred HHHHHHHHhhCC--CceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 108 KLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 108 ~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
..+.+.|.+.+. +++++++++|+.|..++.. +++.+|+++.||.||.+.-..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHH
Confidence 567777777764 5789999999999887764 567899999999999766544
No 188
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.46 E-value=8.3e-07 Score=84.82 Aligned_cols=99 Identities=21% Similarity=0.274 Sum_probs=73.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... . .
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~----~----------------------------------- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-M----D----------------------------------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-S----C-----------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-c----C-----------------------------------
Confidence 58999999999999999999999999999988653221 0 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEE--eCCeEEEEec-----CCcEEeccEEEec
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEE--SGHFKLLHLA-----DGTILKTKVLIGC 157 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~-----~g~~~~ad~vV~A 157 (409)
. --...+.+.|.+. +++++++++|+.+.. +++.+.+++. ++.++.+|.||.|
T Consensus 224 -------~------------~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a 282 (478)
T 1v59_A 224 -------G------------EVAKATQKFLKKQ--GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVA 282 (478)
T ss_dssp -------H------------HHHHHHHHHHHHT--TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred -------H------------HHHHHHHHHHHHC--CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEEC
Confidence 0 0012333444333 899999999999987 5566777765 3457999999999
Q ss_pred CCCchHH
Q 015303 158 DGVNSIV 164 (409)
Q Consensus 158 dG~~S~v 164 (409)
+|.....
T Consensus 283 ~G~~p~~ 289 (478)
T 1v59_A 283 VGRRPYI 289 (478)
T ss_dssp SCEEECC
T ss_pred CCCCcCC
Confidence 9976543
No 189
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.44 E-value=1.7e-06 Score=82.59 Aligned_cols=99 Identities=21% Similarity=0.300 Sum_probs=74.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+-+. +..++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~~------------------- 228 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK------------------FDECI------------------- 228 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCHHH-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc------------------cCHHH-------------------
Confidence 58999999999999999999999999999987652110 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCe--EEEEecCC-cEEeccEEEecCCCc
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHF--KLLHLADG-TILKTKVLIGCDGVN 161 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g-~~~~ad~vV~AdG~~ 161 (409)
...+.+.|.+. +++++++++|+.++.++++ +.+++.+| +++.+|.||.|.|..
T Consensus 229 ----------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 229 ----------------------QNTITDHYVKE--GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp ----------------------HHHHHHHHHHH--TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred ----------------------HHHHHHHHHhC--CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 01334445444 8999999999999876544 78888898 789999999999976
Q ss_pred hHH
Q 015303 162 SIV 164 (409)
Q Consensus 162 S~v 164 (409)
...
T Consensus 285 p~~ 287 (479)
T 2hqm_A 285 SHL 287 (479)
T ss_dssp ECC
T ss_pred Ccc
Confidence 543
No 190
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.43 E-value=1.6e-06 Score=80.88 Aligned_cols=107 Identities=19% Similarity=0.243 Sum_probs=78.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+.....
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~---------------------------------------- 182 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVV---------------------------------------- 182 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTS----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhcc----------------------------------------
Confidence 5799999999999999999999999999998764311000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeE-EEEecCCcEEeccEEEecCCCchH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
. . --...+.+.+.+ .+++++++++|+.+..+++++ .|++.+|+++.||.||.|.|....
T Consensus 183 -------~-------~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 183 -------T-------P----EISSYFHDRHSG--AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp -------C-------H----HHHHHHHHHHHH--TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred -------C-------H----HHHHHHHHHHHh--CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 0 0 001223333433 389999999999998877665 588999999999999999998543
Q ss_pred --HHhhhCCC
Q 015303 164 --VAKWLGFK 171 (409)
Q Consensus 164 --vr~~l~~~ 171 (409)
+.+.++..
T Consensus 243 ~~l~~~~gl~ 252 (404)
T 3fg2_P 243 VEIAAAAGLP 252 (404)
T ss_dssp CHHHHHTTCC
T ss_pred HHHHHhCCCC
Confidence 33444544
No 191
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.43 E-value=1.8e-06 Score=80.93 Aligned_cols=100 Identities=17% Similarity=0.278 Sum_probs=75.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+-...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------------------------------------
Confidence 3579999999999999999999999999999886531100
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeE-EEEecCCcEEeccEEEecCCCch
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
+ + . --...+.+.+.+ .+++++++++|+.+..+++++ .|++.+|+++.||.||.|.|...
T Consensus 192 -----~--~-------~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 192 -----A--G-------E----ALSEFYQAEHRA--HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp -----S--C-------H----HHHHHHHHHHHH--TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred -----c--C-------H----HHHHHHHHHHHh--CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 0 0 0 001122333333 289999999999998876665 68899999999999999999865
Q ss_pred H
Q 015303 163 I 163 (409)
Q Consensus 163 ~ 163 (409)
.
T Consensus 252 ~ 252 (415)
T 3lxd_A 252 C 252 (415)
T ss_dssp S
T ss_pred C
Confidence 4
No 192
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.42 E-value=2.5e-07 Score=86.20 Aligned_cols=39 Identities=31% Similarity=0.440 Sum_probs=34.9
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHc-CCceEEEeCCCCc
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRL-GIRSMVLESSESL 39 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~-g~~V~v~E~~~~~ 39 (409)
|+.++||+|||||++|+++|+.|++. |++|+|+|+++.+
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 33468999999999999999999999 9999999998653
No 193
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.41 E-value=1e-06 Score=82.38 Aligned_cols=108 Identities=21% Similarity=0.346 Sum_probs=79.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.... +
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------~------------------ 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV---------------------L------------------ 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH---------------------H------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh---------------------c------------------
Confidence 3589999999999999999999999999999876522000 0
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
+ . --...+.+.+.+. +++++++++|+.++.++....|++.+|+++.||.||.|.|..+.
T Consensus 184 --------~-------~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 184 --------G-------R----RIGAWLRGLLTEL--GVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp --------C-------H----HHHHHHHHHHHHH--TCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred --------C-------H----HHHHHHHHHHHHC--CCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 0 0 0012233444443 89999999999998766556788999999999999999998654
Q ss_pred --HHhhhCCC
Q 015303 164 --VAKWLGFK 171 (409)
Q Consensus 164 --vr~~l~~~ 171 (409)
+.+.++..
T Consensus 243 ~~l~~~~gl~ 252 (410)
T 3ef6_A 243 DQLARQAGLA 252 (410)
T ss_dssp CHHHHHTTCC
T ss_pred HHHHHhCCCc
Confidence 33444544
No 194
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.39 E-value=1e-06 Score=84.82 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|||+||||||+|+.+|..+++.|.+|+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 48999999999999999999999999999998653
No 195
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.39 E-value=8.3e-07 Score=91.74 Aligned_cols=36 Identities=36% Similarity=0.557 Sum_probs=33.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+||||||||+++|..|++.|++|+|||+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 579999999999999999999999999999998653
No 196
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.38 E-value=2.4e-06 Score=80.97 Aligned_cols=97 Identities=19% Similarity=0.199 Sum_probs=73.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+++|||||..|+-+|..|++.|.+|+++++.+.+....
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----------------------------------------- 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc-----------------------------------------
Confidence 479999999999999999999999999999876521100
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
++ . --...+.+.|.+ .+++++++++|++++..++++.+++.++ ++.||.||.|.|...
T Consensus 187 ------~d-------~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 187 ------FD-------K----EMVAEVQKSLEK--QAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp ------CC-------H----HHHHHHHHHHHT--TTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBC
T ss_pred ------CC-------H----HHHHHHHHHHHH--cCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCC
Confidence 00 0 001233344433 3899999999999997777778888777 799999999999754
No 197
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.37 E-value=2.9e-06 Score=81.96 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=75.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||..|+-+|..|++.|.+|+++|+.+.+... +..++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~~------------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------KDNET------------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------CSHHH-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------ccHHH-------------------
Confidence 58999999999999999999999999999987642210 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCe----EEEEecCCc-EEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHF----KLLHLADGT-ILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~----v~v~~~~g~-~~~ad~vV~AdG 159 (409)
...+.+.|.+. +++++++++|++++.++++ +.|++.+|+ ++.||.||.|+|
T Consensus 258 ----------------------~~~l~~~l~~~--GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G 313 (523)
T 1mo9_A 258 ----------------------RAYVLDRMKEQ--GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLG 313 (523)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCC
T ss_pred ----------------------HHHHHHHHHhC--CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcC
Confidence 12334444433 8999999999999876555 778888887 899999999999
Q ss_pred CchHH
Q 015303 160 VNSIV 164 (409)
Q Consensus 160 ~~S~v 164 (409)
..+..
T Consensus 314 ~~p~~ 318 (523)
T 1mo9_A 314 EQPRS 318 (523)
T ss_dssp CEECC
T ss_pred CccCC
Confidence 87653
No 198
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.36 E-value=2.1e-06 Score=81.88 Aligned_cols=107 Identities=23% Similarity=0.319 Sum_probs=79.3
Q ss_pred ccEEEECCChHHHHHHHHHHHc-CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL-GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~-g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
.+|+|||||+.|+-+|..|++. |.+|+++++.+.+....
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 199 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF---------------------------------------- 199 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc----------------------------------------
Confidence 5899999999999999999999 99999999875421100
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
++ . --...+.+.+.+ .+++++++++|+.++.+++.+.+++.+|+++.||.||.|+|....
T Consensus 200 -------~~-------~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 200 -------TS-------K----SLSQMLRHDLEK--NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp -------SC-------H----HHHHHHHHHHHH--TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred -------cC-------H----HHHHHHHHHHHh--cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 00 0 001233344433 389999999999998877788888999999999999999998643
Q ss_pred --HHhhhCCC
Q 015303 164 --VAKWLGFK 171 (409)
Q Consensus 164 --vr~~l~~~ 171 (409)
+.+.++..
T Consensus 260 ~~l~~~~gl~ 269 (472)
T 3iwa_A 260 TQLARDAGLE 269 (472)
T ss_dssp CHHHHHHTCC
T ss_pred HHHHHhCCcc
Confidence 33444443
No 199
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.35 E-value=2.4e-06 Score=81.70 Aligned_cols=99 Identities=17% Similarity=0.171 Sum_probs=75.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+-+. +..+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~-------------------- 227 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG------------------ADRD-------------------- 227 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SCHH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------cCHH--------------------
Confidence 58999999999999999999999999999987542110 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecC----CcEEeccEEEecCCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD----GTILKTKVLIGCDGV 160 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~----g~~~~ad~vV~AdG~ 160 (409)
-...+.+.|.+. +++++++++|+.++.+++.+.+++.+ ++++.+|.||.|.|.
T Consensus 228 ---------------------~~~~l~~~l~~~--gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 228 ---------------------LVKVWQKQNEYR--FDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp ---------------------HHHHHHHHHGGG--EEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred ---------------------HHHHHHHHHHhc--CCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 012334444433 78999999999999887777888876 777999999999998
Q ss_pred chHH
Q 015303 161 NSIV 164 (409)
Q Consensus 161 ~S~v 164 (409)
....
T Consensus 285 ~p~~ 288 (482)
T 1ojt_A 285 APNG 288 (482)
T ss_dssp EECG
T ss_pred CcCC
Confidence 6543
No 200
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.33 E-value=3.8e-06 Score=78.47 Aligned_cols=104 Identities=19% Similarity=0.282 Sum_probs=74.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.... +..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~-------------------- 187 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA-----------------APA-------------------- 187 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------SCH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc-----------------cCH--------------------
Confidence 3589999999999999999999999999999886421100 000
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
--...+.+.|.+. +++++.+++|+.++ ++ .|++.+|+++.||.||.|.|....
T Consensus 188 ---------------------~~~~~l~~~l~~~--GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 188 ---------------------TLADFVARYHAAQ--GVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp ---------------------HHHHHHHHHHHHT--TCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred ---------------------HHHHHHHHHHHHc--CcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCcc
Confidence 0012333444333 89999999999998 33 677788889999999999997643
Q ss_pred --HHhhhCCC
Q 015303 164 --VAKWLGFK 171 (409)
Q Consensus 164 --vr~~l~~~ 171 (409)
+-+.++..
T Consensus 241 ~~l~~~~gl~ 250 (408)
T 2gqw_A 241 DALARAAGLA 250 (408)
T ss_dssp CHHHHHHTCC
T ss_pred HHHHHhCCCC
Confidence 33444544
No 201
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=3e-06 Score=80.45 Aligned_cols=96 Identities=23% Similarity=0.322 Sum_probs=70.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +..+
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~-------------------- 213 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------------------YDSE-------------------- 213 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SCHH--------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------cCHH--------------------
Confidence 58999999999999999999999999999988653110 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCC--cEEeccEEEecCCCch
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~~~ad~vV~AdG~~S 162 (409)
+ ...+.+.|.+. +++++++++|+.++. ++ +.++..+| .++.+|.||.|+|...
T Consensus 214 --------------------~-~~~l~~~l~~~--gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 214 --------------------L-TAPVAESLKKL--GIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp --------------------H-HHHHHHHHHHH--TCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEE
T ss_pred --------------------H-HHHHHHHHHHC--CCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCc
Confidence 0 11233444443 899999999999986 43 66664456 5799999999999765
Q ss_pred H
Q 015303 163 I 163 (409)
Q Consensus 163 ~ 163 (409)
.
T Consensus 269 ~ 269 (458)
T 1lvl_A 269 R 269 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 202
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.33 E-value=3.9e-06 Score=81.95 Aligned_cols=98 Identities=22% Similarity=0.379 Sum_probs=74.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+... +..++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~~------------------- 194 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP------------------VDREM------------------- 194 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT------------------SCHHH-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh------------------cCHHH-------------------
Confidence 48999999999999999999999999999987542210 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEE-------------------eCCeEEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEE-------------------SGHFKLLHLAD 145 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~-------------------~~~~v~v~~~~ 145 (409)
...+.+.|.+. +++++++++|+.++. .++.+.+++.+
T Consensus 195 ----------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (565)
T 3ntd_A 195 ----------------------AGFAHQAIRDQ--GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN 250 (565)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETT
T ss_pred ----------------------HHHHHHHHHHC--CCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcC
Confidence 12233444332 789999999999887 35678888889
Q ss_pred CcEEeccEEEecCCCchH
Q 015303 146 GTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 146 g~~~~ad~vV~AdG~~S~ 163 (409)
|+++.||.||.|.|....
T Consensus 251 g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 251 GELLETDLLIMAIGVRPE 268 (565)
T ss_dssp SCEEEESEEEECSCEEEC
T ss_pred CCEEEcCEEEECcCCccc
Confidence 989999999999998654
No 203
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.33 E-value=3.5e-06 Score=80.66 Aligned_cols=99 Identities=13% Similarity=0.112 Sum_probs=75.6
Q ss_pred ccEEEECCChHHHHHHHHHHHc---CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL---GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~---g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+-+. +..+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~d~~----------------- 232 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG------------------FDSE----------------- 232 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT------------------SCHH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc------------------cCHH-----------------
Confidence 5899999999999999999999 9999999988642110 0000
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCC-eEEEEecCCcEEeccEEEecCCC
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGCDGV 160 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~AdG~ 160 (409)
-...+.+.|.+. +++++++++|+.++.+++ .+.|++.+|+++.+|.||.|.|.
T Consensus 233 ------------------------~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 233 ------------------------LRKQLTEQLRAN--GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp ------------------------HHHHHHHHHHHT--TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred ------------------------HHHHHHHHHHhC--CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 012344444433 899999999999987764 47888889988999999999998
Q ss_pred chHH
Q 015303 161 NSIV 164 (409)
Q Consensus 161 ~S~v 164 (409)
....
T Consensus 287 ~p~~ 290 (490)
T 1fec_A 287 VPRS 290 (490)
T ss_dssp EESC
T ss_pred CcCc
Confidence 6543
No 204
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.32 E-value=3.2e-06 Score=80.55 Aligned_cols=98 Identities=22% Similarity=0.315 Sum_probs=73.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+. +..+
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~-------------------- 216 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT------------------LDED-------------------- 216 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH--------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc------------------CCHH--------------------
Confidence 58999999999999999999999999999988653211 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHH-HhhCCCceEEeCCeEEEEEEeCCeEEEEec--CC--cEEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETL-AKELPSGTIRYSSQVVSIEESGHFKLLHLA--DG--TILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L-~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g--~~~~ad~vV~AdG 159 (409)
-...+.+.| .+. +++++++++|+.++.+++.+.+++. +| .++.+|.||.|.|
T Consensus 217 ---------------------~~~~l~~~l~~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G 273 (468)
T 2qae_A 217 ---------------------VTNALVGALAKNE--KMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVG 273 (468)
T ss_dssp ---------------------HHHHHHHHHHHHT--CCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSC
T ss_pred ---------------------HHHHHHHHHhhcC--CcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCC
Confidence 012344444 332 8999999999999887766777765 66 5799999999999
Q ss_pred CchH
Q 015303 160 VNSI 163 (409)
Q Consensus 160 ~~S~ 163 (409)
..+.
T Consensus 274 ~~p~ 277 (468)
T 2qae_A 274 RRPF 277 (468)
T ss_dssp EEEC
T ss_pred cccC
Confidence 8754
No 205
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.32 E-value=4.6e-07 Score=82.88 Aligned_cols=37 Identities=41% Similarity=0.552 Sum_probs=34.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCC-CCc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS-ESL 39 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~-~~~ 39 (409)
..+||+|||||++||++|+.|++.|++|+|+|++ +.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 4689999999999999999999999999999998 553
No 206
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.32 E-value=3e-06 Score=80.88 Aligned_cols=99 Identities=20% Similarity=0.298 Sum_probs=73.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.... +..+
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~-------------------- 221 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG-----------------IDME-------------------- 221 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------CCHH--------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------cCHH--------------------
Confidence 579999999999999999999999999999886532210 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCe-EEEEe-----cCCcEEeccEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHF-KLLHL-----ADGTILKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~-----~~g~~~~ad~vV~Ad 158 (409)
-...+.+.|.+. +++++++++|+.++.++++ +.+++ .++.++.+|.||.|+
T Consensus 222 ---------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~ 278 (474)
T 1zmd_A 222 ---------------------ISKNFQRILQKQ--GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCI 278 (474)
T ss_dssp ---------------------HHHHHHHHHHHT--TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECS
T ss_pred ---------------------HHHHHHHHHHHC--CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECc
Confidence 012333444433 8999999999999887765 77764 455689999999999
Q ss_pred CCchH
Q 015303 159 GVNSI 163 (409)
Q Consensus 159 G~~S~ 163 (409)
|....
T Consensus 279 G~~p~ 283 (474)
T 1zmd_A 279 GRRPF 283 (474)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98654
No 207
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.31 E-value=6.4e-06 Score=78.05 Aligned_cols=99 Identities=17% Similarity=0.244 Sum_probs=72.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.... +..+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~-------------------- 192 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY-----------------FDKE-------------------- 192 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-----------------SCHH--------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-----------------hhhh--------------------
Confidence 579999999999999999999999999999876422100 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
-...+.+.|.+. +++++++++|++++.+++++.....+|+++.+|.||.|+|....
T Consensus 193 ---------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 193 ---------------------FTDILAKDYEAH--GVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp ---------------------HHHHHHHHHHHT--TCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred ---------------------HHHHHHHHHHHC--CCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 012233444333 89999999999998766666533347788999999999997654
No 208
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.30 E-value=3.7e-06 Score=79.15 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=77.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~---------------------------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV---------------------------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch----------------------------------------
Confidence 3589999999999999999999999999999865421100
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEE--eCCeE-EEEecCCcEEeccEEEecCCC
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEE--SGHFK-LLHLADGTILKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v-~v~~~~g~~~~ad~vV~AdG~ 160 (409)
++ .. + ...+.+.+.+. +++++++++|+.++. +++.+ .|++.+|+++.||.||.|.|.
T Consensus 189 -------~~-------~~---~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 189 -------TA-------PP---V-SAFYEHLHREA--GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp -------SC-------HH---H-HHHHHHHHHHH--TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred -------hh-------HH---H-HHHHHHHHHhC--CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 00 00 0 11233444443 799999999999987 44554 688889989999999999997
Q ss_pred chH--HHhhhCCC
Q 015303 161 NSI--VAKWLGFK 171 (409)
Q Consensus 161 ~S~--vr~~l~~~ 171 (409)
... +.+.++..
T Consensus 249 ~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 249 IPNCELASAAGLQ 261 (431)
T ss_dssp EECCHHHHHTTCC
T ss_pred CcCcchhhccCCC
Confidence 543 33444443
No 209
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.30 E-value=4.4e-06 Score=80.24 Aligned_cols=99 Identities=17% Similarity=0.237 Sum_probs=76.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+-.. +. .+
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d-------------~~-------------------- 224 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-----ED-------------AD-------------------- 224 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----SS-------------HH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cC-------------HH--------------------
Confidence 57999999999999999999999999999987652110 00 00
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 164 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 164 (409)
-...+.+.|.+. +++++++++|+.++.+++++.+++.+++++.+|.||.|.|..+..
T Consensus 225 ---------------------~~~~l~~~l~~~--GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 225 ---------------------AALVLEESFAER--GVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ---------------------HHHHHHHHHHHT--TCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred ---------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 012233444433 899999999999998777788888888889999999999987643
No 210
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.30 E-value=5.9e-07 Score=82.90 Aligned_cols=37 Identities=30% Similarity=0.412 Sum_probs=33.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 4589999999999999999999999999999998643
No 211
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.29 E-value=5.2e-06 Score=79.49 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=73.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... +..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~--------------------- 215 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL------------------QDE--------------------- 215 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC------------------CCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------CCH---------------------
Confidence 58999999999999999999999999999988652211 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec--CC--cEEeccEEEecCCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA--DG--TILKTKVLIGCDGV 160 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g--~~~~ad~vV~AdG~ 160 (409)
-....+.+.|.+ .++++++++|+.++.+++.+.+++. +| .++.+|.||.|.|.
T Consensus 216 --------------------~~~~~l~~~l~~---~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 216 --------------------EMKRYAEKTFNE---EFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp --------------------HHHHHHHHHHHT---TSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred --------------------HHHHHHHHHHhh---CcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 001223344433 2899999999999988888888775 66 57999999999997
Q ss_pred chH
Q 015303 161 NSI 163 (409)
Q Consensus 161 ~S~ 163 (409)
...
T Consensus 273 ~p~ 275 (492)
T 3ic9_A 273 KAN 275 (492)
T ss_dssp EES
T ss_pred ccC
Confidence 643
No 212
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.27 E-value=4.7e-07 Score=85.78 Aligned_cols=37 Identities=22% Similarity=0.378 Sum_probs=33.3
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|++++||+||||||+|+++|..|++.|++|+|+|++.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 6667999999999999999999999999999999973
No 213
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=7e-06 Score=78.81 Aligned_cols=99 Identities=25% Similarity=0.319 Sum_probs=74.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+-+. +..++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~~------------------- 219 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK------------------FDESV------------------- 219 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT------------------SCHHH-------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc------------------cchhh-------------------
Confidence 47999999999999999999999999999987552110 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCC-eEEEEecCCcE-EeccEEEecCCCch
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGH-FKLLHLADGTI-LKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~-~~ad~vV~AdG~~S 162 (409)
...+.+.|.+. +++++++++|+.++.+++ .+.+++.+|++ +.+|.||.|.|...
T Consensus 220 ----------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 220 ----------------------INVLENDMKKN--NINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCC
T ss_pred ----------------------HHHHHHHHHhC--CCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCc
Confidence 11233444443 899999999999987653 47888889987 99999999999765
Q ss_pred HH
Q 015303 163 IV 164 (409)
Q Consensus 163 ~v 164 (409)
..
T Consensus 276 ~~ 277 (500)
T 1onf_A 276 DT 277 (500)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 214
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.26 E-value=2.6e-06 Score=81.24 Aligned_cols=98 Identities=26% Similarity=0.402 Sum_probs=73.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+. +..+
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------~~~~-------------------- 219 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------MDAE-------------------- 219 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SCHH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------ccHH--------------------
Confidence 58999999999999999999999999999988653211 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec---CC--cEEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA---DG--TILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g--~~~~ad~vV~AdG 159 (409)
-...+.+.|.+. +++++++++|+.++.+++.+.+++. +| .++.+|.||.|.|
T Consensus 220 ---------------------~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 276 (470)
T 1dxl_A 220 ---------------------IRKQFQRSLEKQ--GMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAG 276 (470)
T ss_dssp ---------------------HHHHHHHHHHHS--SCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCC
T ss_pred ---------------------HHHHHHHHHHHc--CCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCC
Confidence 012233444433 7999999999999877666777765 44 5799999999999
Q ss_pred CchH
Q 015303 160 VNSI 163 (409)
Q Consensus 160 ~~S~ 163 (409)
....
T Consensus 277 ~~p~ 280 (470)
T 1dxl_A 277 RTPF 280 (470)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 7654
No 215
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.26 E-value=4.9e-06 Score=79.15 Aligned_cols=98 Identities=22% Similarity=0.278 Sum_probs=73.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+-+. +..++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~~------------------- 214 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN------------------EDADV------------------- 214 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHHH-------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------cCHHH-------------------
Confidence 58999999999999999999999999999988652110 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec-CC--cEEeccEEEecCCCc
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA-DG--TILKTKVLIGCDGVN 161 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~g--~~~~ad~vV~AdG~~ 161 (409)
...+.+.|.+. +++++++++|+.++.+++.+.+++. +| .++.+|.||.|.|..
T Consensus 215 ----------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 215 ----------------------SKEIEKQFKKL--GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp ----------------------HHHHHHHHHHH--TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred ----------------------HHHHHHHHHHc--CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 11233444443 7999999999999887766777775 56 579999999999976
Q ss_pred hH
Q 015303 162 SI 163 (409)
Q Consensus 162 S~ 163 (409)
..
T Consensus 271 p~ 272 (464)
T 2a8x_A 271 PN 272 (464)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 216
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.25 E-value=1.1e-06 Score=82.84 Aligned_cols=55 Identities=18% Similarity=0.040 Sum_probs=42.9
Q ss_pred HHHHHHHhhC--CCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 109 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 109 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
.+.+.|.+.+ .+++|+++++|++|..+++++.+...+|++++||.||.|.|.++.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 4445554433 268899999999999888887655567888999999999999874
No 217
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.25 E-value=7.4e-06 Score=78.50 Aligned_cols=98 Identities=22% Similarity=0.327 Sum_probs=73.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... +..+
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~-------------------- 240 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG------------------MDGE-------------------- 240 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS------------------SCHH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc------------------CCHH--------------------
Confidence 57999999999999999999999999999887542110 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecC---C--cEEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD---G--TILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~---g--~~~~ad~vV~AdG 159 (409)
-...+.+.|.+. +++++.+++|+.++.+++.+.+++.+ | .++.+|.||.|+|
T Consensus 241 ---------------------~~~~l~~~l~~~--gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 241 ---------------------VAKQLQRMLTKQ--GIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp ---------------------HHHHHHHHHHHT--TCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCC
T ss_pred ---------------------HHHHHHHHHHhC--CCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeC
Confidence 012233444333 78999999999999988887777763 4 4799999999999
Q ss_pred CchH
Q 015303 160 VNSI 163 (409)
Q Consensus 160 ~~S~ 163 (409)
....
T Consensus 298 ~~p~ 301 (491)
T 3urh_A 298 RKPS 301 (491)
T ss_dssp CEEC
T ss_pred CccC
Confidence 8644
No 218
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.25 E-value=7.2e-06 Score=78.03 Aligned_cols=97 Identities=14% Similarity=0.151 Sum_probs=73.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+-+ . .+ .
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~----~~-------------~-------------------- 217 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--E----DP-------------A-------------------- 217 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--S----CH-------------H--------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--C----CH-------------H--------------------
Confidence 5799999999999999999999999999998754211 0 00 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 164 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 164 (409)
-...+.+.|.+. +++++++++|++++.+++.+.+++.+ .++.+|.||.|+|..+..
T Consensus 218 ---------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~v~~~~-~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 218 ---------------------IGEAVTAAFRAE--GIEVLEHTQASQVAHMDGEFVLTTTH-GELRADKLLVATGRTPNT 273 (467)
T ss_dssp ---------------------HHHHHHHHHHHT--TCEEETTCCEEEEEEETTEEEEEETT-EEEEESEEEECSCEEESC
T ss_pred ---------------------HHHHHHHHHHhC--CCEEEcCCEEEEEEEeCCEEEEEECC-cEEEcCEEEECCCCCcCC
Confidence 012334444433 89999999999999887777777764 579999999999987653
No 219
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.23 E-value=4.3e-06 Score=79.54 Aligned_cols=139 Identities=12% Similarity=0.091 Sum_probs=79.1
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCCcCCccc----ceeccccHHHHHHHcCchhHHHhccccccceee
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSESLRVTGF----AFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVA 77 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~----~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 77 (409)
..+|+|||||.+|+-+|..|++. |.+|+++++.+...+... ...++|.....+..+. +..............
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~--~~~~~~~~~~~~~~~ 304 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSRE--HAERERLLREYHNTN 304 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSC--HHHHHHHHHHTGGGT
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCC--HHHHHHHHHHhhccC
Confidence 45899999999999999999999 899999999876432110 1112233333333331 111000000000000
Q ss_pred eecCCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec---CCc--EEecc
Q 015303 78 TPTISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA---DGT--ILKTK 152 (409)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g~--~~~ad 152 (409)
+ . ..+.. ....+.+....+.+. ...+++++.+++|+.++.+++.+.+++. +|+ ++.+|
T Consensus 305 ~---~-----~~~~~--------~~~~~~~~l~~~~~~-~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D 367 (463)
T 3s5w_A 305 Y---S-----VVDTD--------LIERIYGVFYRQKVS-GIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYD 367 (463)
T ss_dssp S---S-----CBCHH--------HHHHHHHHHHHHHHH-CCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEES
T ss_pred C---C-----cCCHH--------HHHHHHHHHHHHHhc-CCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECC
Confidence 0 0 00000 000011111111111 1247899999999999998888888887 665 48999
Q ss_pred EEEecCCCc
Q 015303 153 VLIGCDGVN 161 (409)
Q Consensus 153 ~vV~AdG~~ 161 (409)
.||.|+|..
T Consensus 368 ~Vv~AtG~~ 376 (463)
T 3s5w_A 368 AVILATGYE 376 (463)
T ss_dssp EEEECCCEE
T ss_pred EEEEeeCCC
Confidence 999999953
No 220
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.22 E-value=1.4e-05 Score=76.62 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=75.2
Q ss_pred ccEEEECCChHHHHHHHHHHHc---CCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL---GIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTI 81 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~---g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
.+|+|||||..|+-+|..|++. |.+|+|+|+.+.+-+. +..+
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~d~~----------------- 236 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG------------------FDET----------------- 236 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT------------------SCHH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc------------------cCHH-----------------
Confidence 4799999999999999999999 9999999987542110 0000
Q ss_pred CCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCC-eEEEEecCCcEEeccEEEecCCC
Q 015303 82 SGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGCDGV 160 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~AdG~ 160 (409)
-...+.+.|.+. +++++++++|+.++.+++ .+.|++.+|+++.+|.||.|.|.
T Consensus 237 ------------------------~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 237 ------------------------IREEVTKQLTAN--GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp ------------------------HHHHHHHHHHHT--TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred ------------------------HHHHHHHHHHhC--CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 012334444433 899999999999987654 47888889988999999999998
Q ss_pred chHH
Q 015303 161 NSIV 164 (409)
Q Consensus 161 ~S~v 164 (409)
....
T Consensus 291 ~p~~ 294 (495)
T 2wpf_A 291 IPRT 294 (495)
T ss_dssp EECC
T ss_pred cccc
Confidence 6543
No 221
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.22 E-value=1.2e-06 Score=81.05 Aligned_cols=36 Identities=25% Similarity=0.475 Sum_probs=33.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+|||||++|+++|..|++.|++|+|+|+++.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 489999999999999999999999999999998754
No 222
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.21 E-value=8.8e-06 Score=73.17 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=68.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|++|+-+|..|++.|.+|+++++.+..... .
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------------~--------------------- 184 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAE--------------------K--------------------- 184 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCC--------------------H---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccC--------------------H---------------------
Confidence 47999999999999999999999999999987542100 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeE-EEEecC----C--cEEeccEEEec
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLAD----G--TILKTKVLIGC 157 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~----g--~~~~ad~vV~A 157 (409)
.-...+.+.+.+ .+++++++++|+.+..+++++ .|++.+ | .++.||.||.|
T Consensus 185 --------------------~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a 242 (320)
T 1trb_A 185 --------------------ILIKRLMDKVEN--GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVA 242 (320)
T ss_dssp --------------------HHHHHHHHHHHT--SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEEC
T ss_pred --------------------HHHHHHHHhccc--CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEE
Confidence 001123333333 379999999999998776443 355543 4 47999999999
Q ss_pred CCCc
Q 015303 158 DGVN 161 (409)
Q Consensus 158 dG~~ 161 (409)
.|..
T Consensus 243 ~G~~ 246 (320)
T 1trb_A 243 IGHS 246 (320)
T ss_dssp SCEE
T ss_pred eCCC
Confidence 9954
No 223
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.21 E-value=1.4e-05 Score=76.47 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=73.0
Q ss_pred ccEEEECCChHHHHHHHHHHH----cCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeec
Q 015303 5 EDIVIVGAGIAGLTTSLGLYR----LGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPT 80 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~----~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
.+|+|||||+.|+-+|..|++ .|.+|+++++.+.+.... +...
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~-----------------l~~~---------------- 227 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI-----------------LPEY---------------- 227 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-----------------SCHH----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-----------------CCHH----------------
Confidence 479999999999999999987 478899998764311000 0000
Q ss_pred CCCCcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCC
Q 015303 81 ISGKPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGV 160 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 160 (409)
+ ...+.+.+.+ .+++++++++|+.++.+++.+.+++.+|+++.||.||.|.|.
T Consensus 228 ------------------------~-~~~~~~~l~~--~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 228 ------------------------L-SNWTMEKVRR--EGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp ------------------------H-HHHHHHHHHT--TTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred ------------------------H-HHHHHHHHHh--cCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCC
Confidence 0 1123334433 389999999999998877778889999999999999999997
Q ss_pred chH
Q 015303 161 NSI 163 (409)
Q Consensus 161 ~S~ 163 (409)
...
T Consensus 281 ~pn 283 (493)
T 1m6i_A 281 EPN 283 (493)
T ss_dssp EEC
T ss_pred Ccc
Confidence 643
No 224
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.21 E-value=6.7e-06 Score=78.53 Aligned_cols=98 Identities=17% Similarity=0.289 Sum_probs=69.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +..+
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~------------------- 228 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI------------------YDGD------------------- 228 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc------------------CCHH-------------------
Confidence 468999999999999999999999999999987542110 0000
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
+ ...+.+.+.+. +++++++++|+.++.++....+.+. +.++.||.||.|+|....
T Consensus 229 ---------------------~-~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 229 ---------------------M-AEYIYKEADKH--HIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred ---------------------H-HHHHHHHHHHc--CcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 0 12233444332 8999999999999875433345554 457999999999998653
No 225
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.20 E-value=6.9e-07 Score=85.62 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|||+||||||+|+++|..|++.|++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4899999999999999999999999999999964
No 226
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.20 E-value=1.1e-05 Score=77.32 Aligned_cols=98 Identities=12% Similarity=0.200 Sum_probs=70.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISG 83 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.... +..+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~------------------- 237 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY-----------------YDRD------------------- 237 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------SCHH-------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH-----------------HHHH-------------------
Confidence 3589999999999999999999999999999876522110 0000
Q ss_pred CcccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeE-EEEecCCcEEeccEEEecCCCch
Q 015303 84 KPSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
-...+.+.|.+ .+++++++++|+.++. ++.+ .+.+ ++.++.+|.||.|.|...
T Consensus 238 ----------------------~~~~l~~~l~~--~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 238 ----------------------LTDLMAKNMEE--HGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp ----------------------HHHHHHHHHHT--TTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred ----------------------HHHHHHHHHHh--CCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 01233344433 3899999999999986 3333 3444 677899999999999754
Q ss_pred H
Q 015303 163 I 163 (409)
Q Consensus 163 ~ 163 (409)
.
T Consensus 292 ~ 292 (490)
T 2bc0_A 292 N 292 (490)
T ss_dssp C
T ss_pred C
Confidence 3
No 227
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.19 E-value=1.4e-05 Score=76.24 Aligned_cols=98 Identities=21% Similarity=0.248 Sum_probs=74.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+... +..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~--------------------- 221 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA------------------VDE--------------------- 221 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc------------------cCH---------------------
Confidence 57999999999999999999999999999987542110 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCC---cEEeccEEEecCCCc
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG---TILKTKVLIGCDGVN 161 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g---~~~~ad~vV~AdG~~ 161 (409)
--...+.+.|.+. +++++.+++|+.++.+++.+.+++.++ .++.+|.||.|.|..
T Consensus 222 --------------------~~~~~l~~~l~~~--Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 222 --------------------QVAKEAQKILTKQ--GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp --------------------HHHHHHHHHHHHT--TEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred --------------------HHHHHHHHHHHhC--CCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 0012334444433 799999999999998887888887765 578999999999975
Q ss_pred hH
Q 015303 162 SI 163 (409)
Q Consensus 162 S~ 163 (409)
..
T Consensus 280 p~ 281 (476)
T 3lad_A 280 PV 281 (476)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 228
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.19 E-value=6.6e-06 Score=74.53 Aligned_cols=91 Identities=18% Similarity=0.248 Sum_probs=69.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|++|+-+|..|++.|.+|+++++.+....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 5799999999999999999999999999998754211
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEE-EEecC-----CcEEeccEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKL-LHLAD-----GTILKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~-v~~~~-----g~~~~ad~vV~Ad 158 (409)
...+.+.+.+ ..+++++.+++++.+..+++.+. |++.+ +.++.+|.||.|.
T Consensus 211 ----------------------~~~~~~~l~~-~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~ 267 (338)
T 3itj_A 211 ----------------------STIMQKRAEK-NEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAI 267 (338)
T ss_dssp ----------------------CHHHHHHHHH-CTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECS
T ss_pred ----------------------CHHHHHHHHh-cCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEe
Confidence 0122333332 23789999999999988776433 66554 3578999999999
Q ss_pred CCc
Q 015303 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 268 G~~ 270 (338)
T 3itj_A 268 GHT 270 (338)
T ss_dssp CEE
T ss_pred CCC
Confidence 953
No 229
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.18 E-value=1.6e-05 Score=71.12 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=67.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~----------------------------------- 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC-------A----------------------------------- 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS-------C-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC-------C-----------------------------------
Confidence 5899999999999999999999999999998754210 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeE-EEEec---CCc--EEeccEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLA---DGT--ILKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~---~g~--~~~ad~vV~Ad 158 (409)
..+.+.|.+ ..+++++++++++.+..+++++ .+++. +|+ ++.+|.||.|.
T Consensus 182 -----------------------~~~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 237 (311)
T 2q0l_A 182 -----------------------PITLEHAKN-NDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFV 237 (311)
T ss_dssp -----------------------HHHHHHHHT-CTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECS
T ss_pred -----------------------HHHHHHHhh-CCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEe
Confidence 012223322 2478999999999998875543 45554 565 68999999999
Q ss_pred CCc
Q 015303 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 238 G~~ 240 (311)
T 2q0l_A 238 GYD 240 (311)
T ss_dssp CEE
T ss_pred cCc
Confidence 953
No 230
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.16 E-value=1.5e-06 Score=79.98 Aligned_cols=35 Identities=29% Similarity=0.509 Sum_probs=32.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
+||+|||||++|+++|+.|++.|++|+|+|+++.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 69999999999999999999999999999998643
No 231
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=6.5e-06 Score=75.64 Aligned_cols=92 Identities=15% Similarity=0.205 Sum_probs=68.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.+.. +.+ +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~~-------------~-------------------- 184 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LDE-------------E-------------------- 184 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CCH-------------H--------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CCH-------------H--------------------
Confidence 5899999999999999999999999999998864211 000 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
-...+.+.|.+. +++++++++|+.++ .+ .+++.+|+ +.+|.||.|+|....
T Consensus 185 ---------------------~~~~l~~~l~~~--gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 185 ---------------------LSNMIKDMLEET--GVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp ---------------------HHHHHHHHHHHT--TEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEEC
T ss_pred ---------------------HHHHHHHHHHHC--CCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcC
Confidence 012233444433 89999999999987 23 36677887 999999999997654
No 232
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.13 E-value=1.4e-06 Score=83.56 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=32.5
Q ss_pred CCCcccEEEECCChHHHHHHHHHHH-cCCceEEEeC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYR-LGIRSMVLES 35 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~-~g~~V~v~E~ 35 (409)
|++++||+||||||+|+++|..|++ .|++|+|||+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5557999999999999999999999 9999999994
No 233
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.12 E-value=2.4e-06 Score=81.60 Aligned_cols=57 Identities=14% Similarity=0.381 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhCCCceEEeC--CeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHHH
Q 015303 107 RKLLLETLAKELPSGTIRYS--SQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVA 165 (409)
Q Consensus 107 r~~l~~~L~~~~~~~~i~~~--~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr 165 (409)
-..+.+.|.+.+...+|+++ ++|++|+.++++|+ +.+|++++||.||.|...+...+
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ 273 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLR 273 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHH
Confidence 45677788877754589999 56999998877654 57888899999999998665543
No 234
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.12 E-value=2e-05 Score=74.90 Aligned_cols=96 Identities=22% Similarity=0.328 Sum_probs=72.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+.... +.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~d---------------------- 213 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL-----------------ED---------------------- 213 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-----------------CC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC-----------------CC----------------------
Confidence 579999999999999999999999999999875421110 00
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeC-CeEEEEec--CCc--EEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESG-HFKLLHLA--DGT--ILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-~~v~v~~~--~g~--~~~ad~vV~AdG 159 (409)
..+.+.+.+... ++++.+++|+.++.++ +.+.+++. +|+ ++.+|.||.|.|
T Consensus 214 -----------------------~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G 269 (466)
T 3l8k_A 214 -----------------------QDIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAG 269 (466)
T ss_dssp -----------------------HHHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCC
T ss_pred -----------------------HHHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcC
Confidence 011222222222 8899999999998877 78888887 665 799999999999
Q ss_pred CchH
Q 015303 160 VNSI 163 (409)
Q Consensus 160 ~~S~ 163 (409)
....
T Consensus 270 ~~p~ 273 (466)
T 3l8k_A 270 RRPV 273 (466)
T ss_dssp EEEC
T ss_pred CCcc
Confidence 7654
No 235
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=2.1e-06 Score=82.49 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++||+||||||+|+++|..|++.|++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999984
No 236
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.10 E-value=2.3e-06 Score=80.84 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=33.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+||+||||||+|+++|..|++.|++|+|||+.+.+
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 479999999999999999999999999999998653
No 237
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.08 E-value=1.8e-05 Score=77.58 Aligned_cols=96 Identities=21% Similarity=0.384 Sum_probs=72.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+... +..++
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~~------------------- 230 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP------------------IDYEM------------------- 230 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCHHH-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc------------------CCHHH-------------------
Confidence 57999999999999999999999999999987542110 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
...+.+.|.+. +++++.+++|+.++.+++ .|++.+|+++.+|.||.|.|....
T Consensus 231 ----------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 231 ----------------------AAYVHEHMKNH--DVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred ----------------------HHHHHHHHHHc--CCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCCCCC
Confidence 12333444332 899999999999987655 466788889999999999998643
No 238
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.06 E-value=1.9e-05 Score=72.50 Aligned_cols=104 Identities=14% Similarity=0.169 Sum_probs=70.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+++++.+...... . +..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~---------------~-------------------d~~--- 209 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD---------------A-------------------DPS--- 209 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------------CT---
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC---------------C-------------------CCC---
Confidence 479999999999999999999999999999875421100 0 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCC-ceEEeCCeEEEEEEeCCeEEEEecCCcEEe-ccEEEecCCCch
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPS-GTIRYSSQVVSIEESGHFKLLHLADGTILK-TKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~-ad~vV~AdG~~S 162 (409)
..++ . -.+..+.+.|.+ .+ ++++.+++|+.++.+++.+.+++.+|+++. +|.||.|+|...
T Consensus 210 ----~~~~-------~----~~~~~l~~~l~~--~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 210 ----VRLS-------P----YTRQRLGNVIKQ--GARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp ----TSCC-------H----HHHHHHHHHHHT--TCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCG
T ss_pred ----ccCC-------H----HHHHHHHHHHhh--CCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCC
Confidence 0000 0 012334444433 35 899999999999877777888888987665 699999999643
No 239
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.06 E-value=6.1e-05 Score=72.54 Aligned_cols=98 Identities=16% Similarity=0.083 Sum_probs=76.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+++|||||..|+=+|..+++.|.+|+|+++....+. ..+++
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~-------------------~D~ei------------------- 265 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG-------------------FDQQC------------------- 265 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT-------------------SCHHH-------------------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc-------------------cchhH-------------------
Confidence 5899999999999999999999999999986422100 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchHH
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 164 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 164 (409)
...+.+.|.+. +++++.++.++.++..++.+.+.+.++.++.+|.|+.|.|+...+
T Consensus 266 ----------------------~~~l~~~l~~~--gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 266 ----------------------AVKVKLYMEEQ--GVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred ----------------------HHHHHHHHHhh--cceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 12334444443 789999999999999999999999999999999999999976443
No 240
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.05 E-value=3.7e-05 Score=73.33 Aligned_cols=97 Identities=19% Similarity=0.106 Sum_probs=71.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+-.. +..++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~~------------------- 230 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS------------------FDSMI------------------- 230 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCHHH-------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc------------------cCHHH-------------------
Confidence 58999999999999999999999999999987542110 00000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCe--EEEEecC---C----cEEeccEEE
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHF--KLLHLAD---G----TILKTKVLI 155 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~---g----~~~~ad~vV 155 (409)
...+.+.|.+. +++++.+++|+.++..+++ +.+++.+ + .++.+|.||
T Consensus 231 ----------------------~~~~~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 231 ----------------------STNCTEELENA--GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEE
T ss_pred ----------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEE
Confidence 12334444433 7999999999999876554 6777765 2 578999999
Q ss_pred ecCCCch
Q 015303 156 GCDGVNS 162 (409)
Q Consensus 156 ~AdG~~S 162 (409)
.|.|...
T Consensus 287 ~a~G~~p 293 (478)
T 3dk9_A 287 WAIGRVP 293 (478)
T ss_dssp ECSCEEE
T ss_pred Eeecccc
Confidence 9999754
No 241
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.03 E-value=3.9e-05 Score=69.15 Aligned_cols=91 Identities=19% Similarity=0.225 Sum_probs=66.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~----------------------------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA-------N----------------------------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS-------C-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc-------c-----------------------------------
Confidence 4799999999999999999999999999998754210 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec---CCc--EEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA---DGT--ILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g~--~~~ad~vV~AdG 159 (409)
..+.+.+.+ ..+++++++++++.+..++....|++. +|+ ++.+|.||.|.|
T Consensus 191 -----------------------~~~~~~l~~-~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 191 -----------------------KVAQARAFA-NPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp -----------------------HHHHHHHHT-CTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred -----------------------hHHHHHHHh-cCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 011222222 237899999999999875443345554 564 789999999999
Q ss_pred Cc
Q 015303 160 VN 161 (409)
Q Consensus 160 ~~ 161 (409)
..
T Consensus 247 ~~ 248 (325)
T 2q7v_A 247 HV 248 (325)
T ss_dssp EE
T ss_pred CC
Confidence 53
No 242
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.02 E-value=4.9e-05 Score=68.00 Aligned_cols=91 Identities=18% Similarity=0.226 Sum_probs=67.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~------------------------------------------ 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAA------------------------------------------ 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCC------------------------------------------
Confidence 47999999999999999999999999999987543100
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCe---EEEEecCCc--EEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHF---KLLHLADGT--ILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~---v~v~~~~g~--~~~ad~vV~AdG 159 (409)
..+.+.+.+ ..+++++++++++.+..++++ +++...+|+ ++.+|.||.|.|
T Consensus 186 -----------------------~~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G 241 (315)
T 3r9u_A 186 -----------------------PSTVEKVKK-NEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVG 241 (315)
T ss_dssp -----------------------HHHHHHHHH-CTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSC
T ss_pred -----------------------HHHHHHHHh-cCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEc
Confidence 011122222 238999999999999887754 333333775 789999999999
Q ss_pred Cc
Q 015303 160 VN 161 (409)
Q Consensus 160 ~~ 161 (409)
..
T Consensus 242 ~~ 243 (315)
T 3r9u_A 242 LN 243 (315)
T ss_dssp EE
T ss_pred CC
Confidence 53
No 243
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.00 E-value=4.1e-05 Score=73.10 Aligned_cols=96 Identities=19% Similarity=0.176 Sum_probs=70.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++...... +..+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~d~~-------------------- 228 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG-------------------FDQQ-------------------- 228 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT-------------------SCHH--------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc-------------------cCHH--------------------
Confidence 4799999999999999999999999999997421100 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCC-eEEEEecCCc-----EEeccEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGH-FKLLHLADGT-----ILKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~-----~~~ad~vV~Ad 158 (409)
-...+.+.|.+. +++++.+++|+.++..++ .+.+++.++. ++.+|.||.|.
T Consensus 229 ---------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~ 285 (483)
T 3dgh_A 229 ---------------------MAELVAASMEER--GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAI 285 (483)
T ss_dssp ---------------------HHHHHHHHHHHT--TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECS
T ss_pred ---------------------HHHHHHHHHHhC--CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECc
Confidence 012233444433 789999999999987654 4677776654 78999999999
Q ss_pred CCch
Q 015303 159 GVNS 162 (409)
Q Consensus 159 G~~S 162 (409)
|...
T Consensus 286 G~~p 289 (483)
T 3dgh_A 286 GRKG 289 (483)
T ss_dssp CEEE
T ss_pred cccc
Confidence 9754
No 244
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.99 E-value=1.7e-05 Score=72.69 Aligned_cols=94 Identities=22% Similarity=0.281 Sum_probs=67.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+... + .+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~-------~-------------~~------------------- 204 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH-------G-------------KT------------------- 204 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-------S-------------HH-------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-------H-------------HH-------------------
Confidence 47999999999999999999999999999987542110 0 00
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeE-EEEe--cCC--cEEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHL--ADG--TILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~--~~g--~~~~ad~vV~AdG 159 (409)
...+.+.+.+ .+++++++++|+.+..+++.+ .|++ .+| .++.+|.||.|+|
T Consensus 205 ----------------------~~~l~~~~~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 205 ----------------------AHEVERARAN--GTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIG 260 (360)
T ss_dssp ----------------------HHSSHHHHHH--TSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCC
T ss_pred ----------------------HHHHHHHhhc--CceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCC
Confidence 0012222222 278999999999998876643 3444 366 4789999999999
Q ss_pred Cc
Q 015303 160 VN 161 (409)
Q Consensus 160 ~~ 161 (409)
..
T Consensus 261 ~~ 262 (360)
T 3ab1_A 261 FK 262 (360)
T ss_dssp BC
T ss_pred CC
Confidence 54
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.99 E-value=3.4e-05 Score=73.00 Aligned_cols=96 Identities=20% Similarity=0.277 Sum_probs=68.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+....
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS----------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------------------------------
Confidence 489999999999999999999999999999876321110
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
++ . --...+.+.|.+ . ++++.+++++.++.++ .+...+.++.++.+|.||.|.|...
T Consensus 188 ------~~-------~----~~~~~l~~~l~~--~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 188 ------FD-------K----EVTDILEEKLKK--H-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp ------SC-------H----HHHHHHHHHHTT--T-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEE
T ss_pred ------cC-------H----HHHHHHHHHHHh--C-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCcc
Confidence 00 0 001223333332 2 8999999999997655 4444455777899999999999863
No 246
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.98 E-value=2.9e-05 Score=70.29 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=68.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|..|+-+|..|++.|.+|+++++.+..... + ..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~-------~-------------~~------------------- 193 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH-------E-------------AS------------------- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC-------H-------------HH-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc-------H-------------HH-------------------
Confidence 47999999999999999999999999999987542110 0 00
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEec---CC--cEEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLA---DG--TILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g--~~~~ad~vV~AdG 159 (409)
...+.+.+.+ .+++++++++++.++.++....|++. +| .++.+|.||.|.|
T Consensus 194 ----------------------~~~l~~~l~~--~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2zbw_A 194 ----------------------VKELMKAHEE--GRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAG 249 (335)
T ss_dssp ----------------------HHHHHHHHHT--TSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ----------------------HHHHHhcccc--CCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeec
Confidence 0123333433 37899999999999875443345554 66 4789999999999
Q ss_pred Cc
Q 015303 160 VN 161 (409)
Q Consensus 160 ~~ 161 (409)
..
T Consensus 250 ~~ 251 (335)
T 2zbw_A 250 YI 251 (335)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 247
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.98 E-value=4.3e-05 Score=68.26 Aligned_cols=90 Identities=18% Similarity=0.303 Sum_probs=66.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. +
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---------------------~--------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---------------------D--------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS---------------------C---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc---------------------c---------------------
Confidence 4799999999999999999999999999998754210 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeE-EEEecC---Cc--EEeccEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLAD---GT--ILKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~---g~--~~~ad~vV~Ad 158 (409)
..+.+.|.+ ..+++++.+++++.+..+++.+ .+++.+ |+ ++.+|.||.|.
T Consensus 183 -----------------------~~~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 238 (310)
T 1fl2_A 183 -----------------------QVLQDKLRS-LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQI 238 (310)
T ss_dssp -----------------------HHHHHHHHT-CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECS
T ss_pred -----------------------HHHHHHHhh-CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEee
Confidence 012233332 2478999999999998765543 355543 43 68999999999
Q ss_pred CC
Q 015303 159 GV 160 (409)
Q Consensus 159 G~ 160 (409)
|.
T Consensus 239 G~ 240 (310)
T 1fl2_A 239 GL 240 (310)
T ss_dssp CE
T ss_pred CC
Confidence 95
No 248
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.97 E-value=5.8e-05 Score=67.73 Aligned_cols=91 Identities=16% Similarity=0.243 Sum_probs=68.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~------------------------------------------ 192 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQ------------------------------------------ 192 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcC------------------------------------------
Confidence 57999999999999999999999999999987542210
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecC---Cc--EEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD---GT--ILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~---g~--~~~ad~vV~AdG 159 (409)
..+.+.+.+ ..+++++.+++++.+..++....+++.+ |+ ++.+|.||.|.|
T Consensus 193 -----------------------~~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 248 (323)
T 3f8d_A 193 -----------------------PIYVETVKK-KPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIG 248 (323)
T ss_dssp -----------------------HHHHHHHHT-CTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred -----------------------HHHHHHHHh-CCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEEC
Confidence 011122322 2378999999999998776555566665 65 789999999999
Q ss_pred Cc
Q 015303 160 VN 161 (409)
Q Consensus 160 ~~ 161 (409)
..
T Consensus 249 ~~ 250 (323)
T 3f8d_A 249 FD 250 (323)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 249
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.96 E-value=5.7e-05 Score=72.95 Aligned_cols=53 Identities=13% Similarity=0.056 Sum_probs=39.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHH
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALD 57 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~ 57 (409)
.+|+|||+|.+|+-+|..|++.|.+|+|+++.+..-.......+++...+.|+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 231 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIK 231 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHH
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHH
Confidence 58999999999999999999999999999998763111112334444444444
No 250
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.96 E-value=4.4e-05 Score=69.02 Aligned_cols=91 Identities=20% Similarity=0.299 Sum_probs=66.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------------------------------------~-- 197 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA----------------------------------------S-- 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS----------------------------------------C--
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc----------------------------------------c--
Confidence 5899999999999999999999999999998754210 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCC--eE-EEEec---CC--cEEeccEEEe
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGH--FK-LLHLA---DG--TILKTKVLIG 156 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~--~v-~v~~~---~g--~~~~ad~vV~ 156 (409)
..+.+.+++ ..+++++++++++.+..+++ .+ .+.+. +| .++.+|.||.
T Consensus 198 -----------------------~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 253 (333)
T 1vdc_A 198 -----------------------KIMQQRALS-NPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFF 253 (333)
T ss_dssp -----------------------HHHHHHHHT-CTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred -----------------------HHHHHHHHh-CCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEE
Confidence 011122222 23789999999999987664 32 24443 34 4789999999
Q ss_pred cCCCc
Q 015303 157 CDGVN 161 (409)
Q Consensus 157 AdG~~ 161 (409)
|.|..
T Consensus 254 a~G~~ 258 (333)
T 1vdc_A 254 AIGHE 258 (333)
T ss_dssp CSCEE
T ss_pred EeCCc
Confidence 99953
No 251
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.95 E-value=5.8e-05 Score=67.78 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=66.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~------------------------------------------ 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCE------------------------------------------ 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCC------------------------------------------
Confidence 47999999999999999999999999999986532100
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCe-EEEEec---CCc--EEeccEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHF-KLLHLA---DGT--ILKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~---~g~--~~~ad~vV~Ad 158 (409)
..+.+.+.+ .+++++++++++.+..+++. ..+.+. +|+ ++.+|.||.|+
T Consensus 194 -----------------------~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 248 (319)
T 3cty_A 194 -----------------------NAYVQEIKK--RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYV 248 (319)
T ss_dssp -----------------------HHHHHHHHH--TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECC
T ss_pred -----------------------HHHHHHHhc--CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEee
Confidence 012223332 37899999999999876552 234443 564 68999999999
Q ss_pred CCc
Q 015303 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 249 G~~ 251 (319)
T 3cty_A 249 GLI 251 (319)
T ss_dssp CEE
T ss_pred CCc
Confidence 953
No 252
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.95 E-value=6.4e-05 Score=71.89 Aligned_cols=97 Identities=16% Similarity=0.135 Sum_probs=69.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++...... +..+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~d~~-------------------- 226 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG-------------------FDQQ-------------------- 226 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------SCHH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc-------------------CCHH--------------------
Confidence 4799999999999999999999999999997532100 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeC-CeEEEEecC---Cc--EEeccEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESG-HFKLLHLAD---GT--ILKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-~~v~v~~~~---g~--~~~ad~vV~Ad 158 (409)
-...+.+.|.+. +++++.+++++.++..+ +.+.+++.+ |+ ++.+|.||.|.
T Consensus 227 ---------------------~~~~l~~~l~~~--gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~ 283 (488)
T 3dgz_A 227 ---------------------MSSLVTEHMESH--GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAI 283 (488)
T ss_dssp ---------------------HHHHHHHHHHHT--TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECS
T ss_pred ---------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcc
Confidence 012233444433 79999999999998754 446666654 44 47899999999
Q ss_pred CCchH
Q 015303 159 GVNSI 163 (409)
Q Consensus 159 G~~S~ 163 (409)
|....
T Consensus 284 G~~p~ 288 (488)
T 3dgz_A 284 GRVPE 288 (488)
T ss_dssp CEEES
T ss_pred cCCcc
Confidence 97543
No 253
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.95 E-value=5.2e-06 Score=78.54 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHHH-c------CCceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYR-L------GIRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~-~------g~~V~v~E~~~~ 38 (409)
.++||+||||||+|+.+|..|++ . |++|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 45899999999999999999999 7 999999999865
No 254
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.90 E-value=7.6e-06 Score=80.45 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
.++||+||||||||+++|..|++.|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 3589999999999999999999999999999984
No 255
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.89 E-value=8.5e-06 Score=79.12 Aligned_cols=36 Identities=31% Similarity=0.464 Sum_probs=33.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..||++|||+|++|+++|..|++.|++|+|+|++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 358999999999999999999999999999999864
No 256
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.88 E-value=9.5e-06 Score=81.46 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=33.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+||+||||||||+++|..|+++|++|+|||+.+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 47999999999999999999999999999999865
No 257
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.86 E-value=8.4e-06 Score=78.85 Aligned_cols=36 Identities=36% Similarity=0.448 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHHH-cCCceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYR-LGIRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~-~g~~V~v~E~~~~ 38 (409)
..||+||||||++|+.+|..|++ .|++|+|+|++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 36999999999999999999998 6899999999864
No 258
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.86 E-value=6.3e-05 Score=72.74 Aligned_cols=34 Identities=12% Similarity=0.205 Sum_probs=32.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 4799999999999999999999999999999875
No 259
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.86 E-value=0.00013 Score=68.63 Aligned_cols=93 Identities=18% Similarity=0.366 Sum_probs=69.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... ...
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~------------------~d~--------------------- 188 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL------------------MDA--------------------- 188 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT------------------SCG---------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc------------------ccc---------------------
Confidence 47999999999999999999999999999987542110 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCch
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 162 (409)
-....+.+.|.+. +++++.+++|+.++. + .+++.+|+++.+|.|+.|.|...
T Consensus 189 --------------------~~~~~~~~~l~~~--gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 189 --------------------DMNQPILDELDKR--EIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp --------------------GGGHHHHHHHHHT--TCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCEEE
T ss_pred --------------------hhHHHHHHHhhcc--ceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEeceec
Confidence 0012334444443 789999999988753 3 47788999999999999999653
No 260
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.82 E-value=1.4e-05 Score=79.53 Aligned_cols=36 Identities=22% Similarity=0.450 Sum_probs=33.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+||||||||+.+|..|+++|++|+|+|+.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 479999999999999999999999999999998653
No 261
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.82 E-value=6.8e-05 Score=67.87 Aligned_cols=90 Identities=18% Similarity=0.242 Sum_probs=64.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... . +
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~----------------------------------------~-~ 194 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA----------------------------------------S-K 194 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS----------------------------------------C-T
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc----------------------------------------c-H
Confidence 5899999999999999999999999999998754200 0 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCe--EEEEe-cCC--cEEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHF--KLLHL-ADG--TILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~-~~g--~~~~ad~vV~AdG 159 (409)
.+.+.+.+ ..+++++++++++.++.+++. +.+.. .+| .++.+|.||.|.|
T Consensus 195 ------------------------~~~~~~~~-~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2a87_A 195 ------------------------IMLDRARN-NDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIG 249 (335)
T ss_dssp ------------------------THHHHHHH-CTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSC
T ss_pred ------------------------HHHHHHhc-cCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccC
Confidence 01112222 237899999999999876532 44432 144 4789999999999
Q ss_pred C
Q 015303 160 V 160 (409)
Q Consensus 160 ~ 160 (409)
.
T Consensus 250 ~ 250 (335)
T 2a87_A 250 H 250 (335)
T ss_dssp E
T ss_pred C
Confidence 5
No 262
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.81 E-value=7.1e-06 Score=79.30 Aligned_cols=35 Identities=31% Similarity=0.384 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.||+||||||+||+.+|..|++ |.+|+|+|++...
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 5899999999999999999999 9999999998653
No 263
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.78 E-value=2e-05 Score=79.69 Aligned_cols=36 Identities=25% Similarity=0.622 Sum_probs=33.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.++|+|||||++||++|+.|+++|++|+|+|+.+.+
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 469999999999999999999999999999998754
No 264
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.76 E-value=7.2e-05 Score=67.42 Aligned_cols=90 Identities=17% Similarity=0.198 Sum_probs=66.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+..... +..
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~--------------------~~~------------------- 195 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH--------------------EHS------------------- 195 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC--------------------HHH-------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc--------------------HHH-------------------
Confidence 47999999999999999999999999999987542110 000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecC-----CcEEeccEEEecCC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD-----GTILKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~-----g~~~~ad~vV~AdG 159 (409)
.+.|.+ .+++++.+++++.+..+++...+++.+ +.++.+|.||.|.|
T Consensus 196 --------------------------~~~l~~--~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 247 (332)
T 3lzw_A 196 --------------------------VENLHA--SKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYG 247 (332)
T ss_dssp --------------------------HHHHHH--SSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCC
T ss_pred --------------------------HHHHhc--CCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeec
Confidence 011222 378999999999998776655566554 34789999999999
Q ss_pred Cc
Q 015303 160 VN 161 (409)
Q Consensus 160 ~~ 161 (409)
..
T Consensus 248 ~~ 249 (332)
T 3lzw_A 248 FV 249 (332)
T ss_dssp EE
T ss_pred cC
Confidence 53
No 265
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.73 E-value=0.0003 Score=67.65 Aligned_cols=96 Identities=14% Similarity=0.071 Sum_probs=65.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++...... +..+
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~-------------------~d~~-------------------- 251 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG-------------------FDQD-------------------- 251 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------SCHH--------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc-------------------CCHH--------------------
Confidence 4699999999999999999999999999997421000 0000
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeC----CeEEEE--ecCCc---EEeccEEE
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESG----HFKLLH--LADGT---ILKTKVLI 155 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~----~~v~v~--~~~g~---~~~ad~vV 155 (409)
-...+.+.|.+. +++++.+++++.+...+ +.+.++ ..++. ++.+|.||
T Consensus 252 ---------------------~~~~~~~~l~~~--GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi 308 (519)
T 3qfa_A 252 ---------------------MANKIGEHMEEH--GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVM 308 (519)
T ss_dssp ---------------------HHHHHHHHHHHT--TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEE
T ss_pred ---------------------HHHHHHHHHHHC--CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEE
Confidence 012233444333 78999999888886543 344444 34552 56899999
Q ss_pred ecCCCch
Q 015303 156 GCDGVNS 162 (409)
Q Consensus 156 ~AdG~~S 162 (409)
.|.|...
T Consensus 309 ~a~G~~p 315 (519)
T 3qfa_A 309 LAIGRDA 315 (519)
T ss_dssp ECSCEEE
T ss_pred EecCCcc
Confidence 9999754
No 266
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.73 E-value=2.4e-05 Score=74.11 Aligned_cols=37 Identities=24% Similarity=0.295 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC--CceEEEeCCCCc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLG--IRSMVLESSESL 39 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g--~~V~v~E~~~~~ 39 (409)
.++||+||||||+|+.+|..|++.| ++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 3579999999999999999999998 999999998653
No 267
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.72 E-value=2.6e-05 Score=81.22 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=32.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
.+||+||||||||+++|..|++.|+ +|+|||+.+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 4699999999999999999999999 7999999764
No 268
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.71 E-value=0.00011 Score=65.15 Aligned_cols=84 Identities=15% Similarity=0.119 Sum_probs=63.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.| +|+++++.+. . +
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~--------~-------------~----------------------- 176 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV--------E-------------P----------------------- 176 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC--------C-------------C-----------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC--------C-------------C-----------------------
Confidence 57999999999999999999999 9999876532 0 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
...+.+.|.+. +++++. ++|+.+..++ .+++.+|+++.+|.||.|.|..
T Consensus 177 ----------------------~~~~~~~l~~~--gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 177 ----------------------DADQHALLAAR--GVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp ----------------------CHHHHHHHHHT--TCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEE
T ss_pred ----------------------CHHHHHHHHHC--CcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcc
Confidence 01122333332 788884 8888886533 6788899999999999999953
No 269
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.68 E-value=3.1e-05 Score=74.30 Aligned_cols=36 Identities=22% Similarity=0.436 Sum_probs=33.4
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..++|++|||+|++|+.+|..|++.|.+|+|+|++.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 346899999999999999999999999999999875
No 270
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.67 E-value=2.4e-05 Score=75.99 Aligned_cols=36 Identities=33% Similarity=0.373 Sum_probs=33.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLG-IRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g-~~V~v~E~~~~ 38 (409)
..||+||||||.|||.+|..|++.| .+|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4599999999999999999999987 79999999876
No 271
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.63 E-value=3.8e-05 Score=73.68 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=33.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++|++|||+|++|+++|..|++.|++|+|+|++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 46899999999999999999999999999999876
No 272
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.61 E-value=6.4e-05 Score=73.17 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=36.7
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCc
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVT 42 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~ 42 (409)
.++|||+|||+|+.|+.+|..|++.|.+|+++||++.....
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 34699999999999999999999999999999999875443
No 273
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.59 E-value=0.00014 Score=68.61 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCc-eEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIR-SMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~-V~v~E~~~~ 38 (409)
.+|+|||||.+|+-+|..|++.|.+ |+|+++.+.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 4799999999999999999999999 999998754
No 274
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.59 E-value=0.00025 Score=67.24 Aligned_cols=34 Identities=12% Similarity=0.320 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|||||.+|+-+|..|++.|.+|+++++++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 4799999999999999999999999999998754
No 275
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.58 E-value=3.6e-05 Score=74.71 Aligned_cols=35 Identities=37% Similarity=0.561 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CCceEEEeCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRL-GIRSMVLESSE 37 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~-g~~V~v~E~~~ 37 (409)
..||+||||||.|||.+|..|++. +.+|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 359999999999999999999974 89999999987
No 276
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.57 E-value=6.5e-05 Score=72.72 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=32.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 5799999999999999999999999999999875
No 277
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.55 E-value=5.7e-05 Score=73.77 Aligned_cols=37 Identities=30% Similarity=0.424 Sum_probs=33.6
Q ss_pred CcccEEEECCChHHHHHHHHHHH-cCCceEEEeCCCCc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYR-LGIRSMVLESSESL 39 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~-~g~~V~v~E~~~~~ 39 (409)
..+|++|||+|++|+++|..|++ .|.+|+|+|++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 35899999999999999999999 89999999998643
No 278
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.55 E-value=3.6e-05 Score=75.92 Aligned_cols=36 Identities=33% Similarity=0.467 Sum_probs=33.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcC--------CceEEEeCCC-Cc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLG--------IRSMVLESSE-SL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g--------~~V~v~E~~~-~~ 39 (409)
..+|+|||||++||++|+.|++.| ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999999 9999999987 54
No 279
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.54 E-value=3e-05 Score=75.06 Aligned_cols=35 Identities=37% Similarity=0.407 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHH-cCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYR-LGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~-~g~~V~v~E~~~~ 38 (409)
.||++|||||.||+.+|..|++ .|.+|+|+|+...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 4899999999999999999998 7999999999764
No 280
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.54 E-value=0.00057 Score=65.76 Aligned_cols=90 Identities=17% Similarity=0.290 Sum_probs=66.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+++++.+.... +
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---------------------~--------------------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---------------------D--------------------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---------------------C---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---------------------C---------------------
Confidence 4799999999999999999999999999997654210 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEeCCeE-EEEecC---Cc--EEeccEEEecC
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLAD---GT--ILKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~---g~--~~~ad~vV~Ad 158 (409)
..+.+.|. ..++++++.+++++.+..+++++ .+++.+ |+ ++.+|.||.|.
T Consensus 394 -----------------------~~l~~~l~-~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 449 (521)
T 1hyu_A 394 -----------------------QVLQDKVR-SLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQI 449 (521)
T ss_dssp -----------------------HHHHHHHT-TCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECC
T ss_pred -----------------------HHHHHHHh-cCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECc
Confidence 01222332 22478999999999998765544 355543 43 68999999999
Q ss_pred CC
Q 015303 159 GV 160 (409)
Q Consensus 159 G~ 160 (409)
|.
T Consensus 450 G~ 451 (521)
T 1hyu_A 450 GL 451 (521)
T ss_dssp CE
T ss_pred CC
Confidence 94
No 281
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.53 E-value=0.001 Score=65.21 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999976
No 282
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.49 E-value=6.3e-05 Score=72.85 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=33.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CCceEEEeCCCCc
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRL-GIRSMVLESSESL 39 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~-g~~V~v~E~~~~~ 39 (409)
+.+|++|||+|++|+++|..|++. |.+|+|+|++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 358999999999999999999998 8999999998543
No 283
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.48 E-value=0.00048 Score=65.85 Aligned_cols=51 Identities=20% Similarity=0.212 Sum_probs=35.7
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCCc----EEeccEEEecCCCc
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGT----ILKTKVLIGCDGVN 161 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~----~~~ad~vV~AdG~~ 161 (409)
.+.+.|.+. +++++.+++|+.++.++........+|+ ++.||+||-|.|..
T Consensus 277 ~~~~~L~~~--GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 277 YAQSHLENT--SIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHT--TCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHhc--ceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 344455443 8999999999998644333444455664 68999999999963
No 284
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.09 E-value=0.00085 Score=67.30 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=30.9
Q ss_pred ccEEEEC--CChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVG--AGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG--~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799999 99999999999999999999999875
No 285
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.08 E-value=0.0016 Score=67.43 Aligned_cols=88 Identities=17% Similarity=0.165 Sum_probs=65.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcCCcccceeccccHHHHHHHcCchhHHHhccccccceeeeecCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLRVTGFAFTVWTNAWKALDAVGIGNSLRQQHQQLRSIVATPTISGK 84 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.+.. .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~----------------------~-------------------- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA----------------------A-------------------- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH----------------------H--------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch----------------------h--------------------
Confidence 4799999999999999999999999999998754210 0
Q ss_pred cccccccccccccCCccceeccHHHHHHHHHhhCCCceEEeCCeEEEEEEe-CCe-EEEEecC-------C--cEEeccE
Q 015303 85 PSSERSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEES-GHF-KLLHLAD-------G--TILKTKV 153 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~-~~~-v~v~~~~-------g--~~~~ad~ 153 (409)
.+.|.+ .+++++.++.++.+..+ +++ ..|++.+ | .++.||.
T Consensus 323 --------------------------~~~l~~--~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~ 374 (965)
T 2gag_A 323 --------------------------AAQAVA--DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADV 374 (965)
T ss_dssp --------------------------HHHHHH--TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSE
T ss_pred --------------------------HHHHHh--CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCE
Confidence 012222 27899999999999873 332 2344433 4 5799999
Q ss_pred EEecCCCch
Q 015303 154 LIGCDGVNS 162 (409)
Q Consensus 154 vV~AdG~~S 162 (409)
||.|.|...
T Consensus 375 Vv~a~G~~P 383 (965)
T 2gag_A 375 LAVAGGFNP 383 (965)
T ss_dssp EEEECCEEE
T ss_pred EEECCCcCc
Confidence 999999753
No 286
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.01 E-value=0.0007 Score=62.43 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=33.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCcC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESLR 40 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 479999999999999999999999999999987653
No 287
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.92 E-value=0.0011 Score=52.45 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35899999999999999999999999999998754
No 288
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.91 E-value=0.0037 Score=62.11 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=35.7
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecCC--cEEeccEEEecCCCc
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVN 161 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~~~ad~vV~AdG~~ 161 (409)
.+.+.|.+. +++++.+++|+.++ ++++.++ .+| .++.+|.||.|.|..
T Consensus 578 ~~~~~l~~~--GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 578 IHRTTLLSR--GVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHT--TCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHhc--CCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 344555443 89999999999986 4455555 566 479999999999954
No 289
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.90 E-value=0.0013 Score=51.86 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4589999999999999999999999999999873
No 290
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.86 E-value=0.00092 Score=60.65 Aligned_cols=32 Identities=16% Similarity=0.290 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|||+|++|+-+|..|++.| +|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 58999999999999999999998 799999874
No 291
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.85 E-value=0.0011 Score=51.42 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 292
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.83 E-value=0.0061 Score=57.52 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHH--------------------HcCC-ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLY--------------------RLGI-RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~--------------------~~g~-~V~v~E~~~~ 38 (409)
.+|+|||+|..|+-+|..|+ +.|. +|+|++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 58999999999999999999 5787 6999998864
No 293
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.82 E-value=0.0013 Score=50.74 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999999864
No 294
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.79 E-value=0.0054 Score=59.25 Aligned_cols=35 Identities=14% Similarity=0.380 Sum_probs=32.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+..
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 57999999999999999999999999999987643
No 295
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.79 E-value=0.0015 Score=50.64 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
-.|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999999754
No 296
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.73 E-value=0.0016 Score=57.15 Aligned_cols=38 Identities=13% Similarity=0.340 Sum_probs=34.3
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
||...+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 66556899999999999999999999999999998754
No 297
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.71 E-value=0.0096 Score=62.05 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
+|+|||||..|+-+|..|++.|. +|+|+++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 89999999999999999999996 899999875
No 298
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.65 E-value=0.0044 Score=58.38 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHc--------------------CC-ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--------------------GI-RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--------------------g~-~V~v~E~~~~ 38 (409)
.+|+|||+|.+|+-+|..|++. |. +|+|++++..
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 4799999999999999999974 64 8999998864
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.63 E-value=0.0021 Score=47.89 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcC-CceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLG-IRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g-~~V~v~E~~~ 37 (409)
.+|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 58999999999999999999999 8999999864
No 300
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.54 E-value=0.004 Score=58.64 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCCc
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSESL 39 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~~ 39 (409)
.+|+|||||.+|+-+|..+.+.|. +|+++++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 479999999999999999999998 59999988653
No 301
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.42 E-value=0.0027 Score=57.80 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=31.9
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
||+..+|+|||+|-.|...|..|++.|++|+++++++
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 6666799999999999999999999999999999864
No 302
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.40 E-value=0.0033 Score=56.19 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=34.5
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
|.+..+|+|||+|-.|..+|..|++.|+ +|+++|+++.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 6666799999999999999999999998 9999998753
No 303
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.32 E-value=0.0031 Score=56.17 Aligned_cols=35 Identities=11% Similarity=0.320 Sum_probs=32.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 48999999999999999999999999999988653
No 304
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.26 E-value=0.017 Score=55.12 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~ 38 (409)
.+|+|||+|-+|.-++..|++. +.+|+++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 4799999999999999999875 678999998764
No 305
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.24 E-value=0.0052 Score=49.96 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHc-CCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL-GIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~-g~~V~v~E~~~~ 38 (409)
..|+|+|+|..|..+|..|.+. |++|+++|+++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 4799999999999999999999 999999998753
No 306
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.23 E-value=0.0052 Score=47.51 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 307
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.21 E-value=0.0092 Score=55.36 Aligned_cols=38 Identities=11% Similarity=0.036 Sum_probs=32.2
Q ss_pred CceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCc
Q 015303 120 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 161 (409)
Q Consensus 120 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
+++++++++|+.++.+ . +++.+|+++.+|.||.|.|..
T Consensus 232 gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 232 GIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp TCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEE
T ss_pred CCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCC
Confidence 7899999999998643 2 677889999999999999953
No 308
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.15 E-value=0.0037 Score=52.50 Aligned_cols=33 Identities=6% Similarity=0.233 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998754
No 309
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.14 E-value=0.0061 Score=54.44 Aligned_cols=38 Identities=18% Similarity=0.357 Sum_probs=33.3
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
|+...+|+|||+|-.|..+|..|+..|+ +|+++|.+..
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 6656799999999999999999999998 9999998753
No 310
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.10 E-value=0.0055 Score=54.82 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|||+|-.|.++|..|++.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999863
No 311
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.09 E-value=0.0042 Score=54.92 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++.+|.|||.|-.|...|..|++.|++|+++|+++.
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 356899999999999999999999999999998865
No 312
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.08 E-value=0.0046 Score=54.81 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|||+|..|...|..++..|++|+|+|..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999998754
No 313
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.04 E-value=0.013 Score=54.83 Aligned_cols=50 Identities=12% Similarity=0.035 Sum_probs=34.9
Q ss_pred HHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecC--CcEEeccEEEecCCCc
Q 015303 108 KLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD--GTILKTKVLIGCDGVN 161 (409)
Q Consensus 108 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~--g~~~~ad~vV~AdG~~ 161 (409)
..+.+.|.+. +++++++++|+.++. +.++++..+ +.++.+|+||.|.|..
T Consensus 204 ~~l~~~l~~~--GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 204 RLVEDLFAER--NIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHT--TCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHC--CCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCCc
Confidence 3444555443 899999999999854 344443322 5689999999999864
No 314
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.96 E-value=0.0071 Score=54.46 Aligned_cols=33 Identities=33% Similarity=0.307 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
..+|+|||+|-.|.++|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999974
No 315
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.95 E-value=0.0067 Score=53.91 Aligned_cols=34 Identities=24% Similarity=0.520 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|||||..|+-+|..|++.|.+|+|+++...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 5799999999999999999999999999998654
No 316
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.94 E-value=0.0068 Score=54.93 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=32.6
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+...+|.|||.|..|..+|..|++.|++|+++|+.+.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 45567999999999999999999999999999998753
No 317
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.92 E-value=0.0081 Score=53.23 Aligned_cols=34 Identities=15% Similarity=0.376 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999998754
No 318
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.90 E-value=0.0068 Score=54.00 Aligned_cols=33 Identities=36% Similarity=0.339 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|||+|-.|.++|..|++.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 489999999999999999999999999999863
No 319
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.81 E-value=0.0074 Score=53.77 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=31.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998754
No 320
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.75 E-value=0.0088 Score=52.74 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|||+|-.|.++|..|++.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 489999999999999999999999999999874
No 321
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.72 E-value=0.011 Score=52.52 Aligned_cols=34 Identities=21% Similarity=0.436 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
..+|.|||+|..|..+|..|+..|+ +|+++|..+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 4689999999999999999999999 999999874
No 322
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.72 E-value=0.035 Score=51.95 Aligned_cols=48 Identities=15% Similarity=0.137 Sum_probs=33.6
Q ss_pred HHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEe--cC-----CcEEeccEEEecCCC
Q 015303 109 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL--AD-----GTILKTKVLIGCDGV 160 (409)
Q Consensus 109 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~--~~-----g~~~~ad~vV~AdG~ 160 (409)
.+.+.|.+. +++++++++|+.++. +.+.++. .+ +.++.+|+++.|.|.
T Consensus 213 ~~~~~l~~~--gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 213 ILTKGLKEE--GIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHT--TCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHC--CCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 344555443 899999999998853 4554443 23 457899999999884
No 323
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.71 E-value=0.0094 Score=53.05 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|.|||+|..|..+|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 489999999999999999999999999999864
No 324
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.68 E-value=0.0082 Score=56.27 Aligned_cols=36 Identities=22% Similarity=0.421 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
..+|+|||.|++|+++|..|+++|++|+++|.+..+
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987654
No 325
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.66 E-value=0.012 Score=48.90 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998754
No 326
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.62 E-value=0.012 Score=49.11 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESS 36 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
...|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999999999999974
No 327
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.61 E-value=0.012 Score=55.35 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|||.|.+|+++|..|+++|++|++.|++.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 589999999999999999999999999999875
No 328
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.60 E-value=0.0043 Score=58.43 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=32.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|+|+|+|-.|..+|..|.+.|++|+|+|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46899999999999999999999999999999863
No 329
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.58 E-value=0.012 Score=51.64 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|..|..+|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998754
No 330
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.55 E-value=0.011 Score=52.17 Aligned_cols=37 Identities=24% Similarity=0.411 Sum_probs=31.9
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|+.+.+|.|||+|-.|...|..|++.|++|+++++++
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6666799999999999999999999999999999864
No 331
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.53 E-value=0.015 Score=52.16 Aligned_cols=34 Identities=12% Similarity=0.246 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
.+|+|||+|-.|.++|..|++.|+ +|+++|.+..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 589999999999999999999998 9999998753
No 332
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.53 E-value=0.011 Score=55.73 Aligned_cols=36 Identities=11% Similarity=0.321 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CC-ceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRL-GI-RSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~-g~-~V~v~E~~~~ 38 (409)
+..+|.|||+|-.|+.+|..|++. |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999998866
No 333
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.44 E-value=0.015 Score=53.04 Aligned_cols=35 Identities=29% Similarity=0.435 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||+|++|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45899999999999999999999999999998855
No 334
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.44 E-value=0.007 Score=50.86 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEE-EeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMV-LESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v-~E~~~~ 38 (409)
..+|.|||+|-.|.++|..|++.|++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 35899999999999999999999999999 887644
No 335
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.43 E-value=0.014 Score=52.17 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=31.7
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcC----CceEEEeCCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLG----IRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g----~~V~v~E~~~~ 38 (409)
||..++|.|||+|-.|.++|..|++.| ++|++++++..
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 344568999999999999999999999 79999998753
No 336
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.41 E-value=0.017 Score=51.34 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=31.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5899999999999999999999999999998754
No 337
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.40 E-value=0.0085 Score=51.78 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||||.+|...+..|.+.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999999999999999999999999999753
No 338
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.40 E-value=0.014 Score=54.64 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=31.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|-.|+.+|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5899999999999999999999999999998754
No 339
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.36 E-value=0.018 Score=51.58 Aligned_cols=34 Identities=29% Similarity=0.387 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
.+|+|||+|-.|..+|..|+..|+ +|+++|.+..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 589999999999999999999999 9999998754
No 340
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.35 E-value=0.041 Score=52.34 Aligned_cols=44 Identities=16% Similarity=0.043 Sum_probs=37.3
Q ss_pred CceEEeCCeEEEEEEeCCeEEEEecCCcEEeccEEEecCCCchH
Q 015303 120 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 163 (409)
Q Consensus 120 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 163 (409)
+++++++++|+.+..++....+.+.+|.++.+|.||.|.|..+.
T Consensus 271 GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 271 GIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPD 314 (493)
T ss_dssp TCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEEC
T ss_pred CcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcC
Confidence 89999999999998665545677888889999999999998654
No 341
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.35 E-value=0.016 Score=51.79 Aligned_cols=33 Identities=21% Similarity=0.431 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
++|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999998 999999874
No 342
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.33 E-value=0.016 Score=52.42 Aligned_cols=35 Identities=29% Similarity=0.324 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 36899999999999999999999999999998643
No 343
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.32 E-value=0.019 Score=51.08 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||+|..|...|..|++.|++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998754
No 344
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.28 E-value=0.019 Score=51.06 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|..|.++|..|+..|+ +|+++|....
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 4689999999999999999999999 9999998754
No 345
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.23 E-value=0.017 Score=52.25 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||+|.+|+.+|..|...|.+|+++|++..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45899999999999999999999999999998854
No 346
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.19 E-value=0.016 Score=50.88 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+.+|.|||+|..|...|..|+ .|++|+++|+.+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 468999999999999999999 9999999998754
No 347
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.19 E-value=0.018 Score=54.49 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|.|||+|-.|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 36899999999999999999999999999998753
No 348
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.16 E-value=0.02 Score=54.10 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 45899999999999999999999999999998754
No 349
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.15 E-value=0.65 Score=47.12 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=42.5
Q ss_pred HHHHHHHHhhCCCceEEeCCeEEEEEEeCCeEEEEecC------CcEEeccEEEecCCCchHHHh
Q 015303 108 KLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD------GTILKTKVLIGCDGVNSIVAK 166 (409)
Q Consensus 108 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~------g~~~~ad~vV~AdG~~S~vr~ 166 (409)
..|.+.|.+ +.+|+++++|+.|...+++|+|++.+ +.+++||.||.|.-. ..+++
T Consensus 572 ~~L~~aLa~---~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl-~vLk~ 632 (852)
T 2xag_A 572 SCVPVALAE---GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPL-GVLKQ 632 (852)
T ss_dssp THHHHHHTT---TCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCH-HHHHC
T ss_pred HHHHHHHHh---CCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCH-HHHHh
Confidence 455566655 45799999999999999999998876 568999999988874 34443
No 350
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.15 E-value=0.022 Score=48.65 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 46899999999999999999999999999998754
No 351
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.12 E-value=0.019 Score=50.91 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|+|||+|-.|.++|..|+ .|.+|++++|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999999874
No 352
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.12 E-value=0.024 Score=50.41 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|..|.++|..|+..|+ +|.++|....
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 4689999999999999999999998 9999998754
No 353
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.10 E-value=0.026 Score=50.01 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999998753
No 354
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=95.05 E-value=0.043 Score=47.31 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcC----CceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLG----IRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g----~~V~v~E~~~~ 38 (409)
..+|.|||+|-.|.+.|..|++.| ++|.++++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 458999999999999999999999 69999998765
No 355
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.01 E-value=0.023 Score=50.31 Aligned_cols=32 Identities=25% Similarity=0.483 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+|+|||+|-.|.++|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 999999874
No 356
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.01 E-value=0.02 Score=52.90 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+..|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999864
No 357
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.01 E-value=0.021 Score=48.90 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
.+|+|||+|-.|..+|..|++.|. +|+|+|++..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 589999999999999999999998 8999998753
No 358
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.00 E-value=0.023 Score=51.12 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..+|.|||+|-.|.++|..|++.|++|+++++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999863
No 359
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.00 E-value=0.02 Score=54.05 Aligned_cols=38 Identities=32% Similarity=0.438 Sum_probs=33.1
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~ 38 (409)
|++..+|.|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 44446899999999999999999999 899999998753
No 360
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.00 E-value=0.021 Score=53.31 Aligned_cols=34 Identities=21% Similarity=0.446 Sum_probs=31.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999998865
No 361
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.99 E-value=0.012 Score=53.68 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|.|||+|-.|.+.|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 362
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.98 E-value=0.024 Score=50.49 Aligned_cols=36 Identities=17% Similarity=0.365 Sum_probs=31.4
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
|++.+|+|||+|-.|.++|..|+..|+ +|.++|.+.
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 345799999999999999999999885 899999763
No 363
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.95 E-value=0.025 Score=50.36 Aligned_cols=34 Identities=15% Similarity=0.339 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+.+|+|||+|-.|.++|..|+..|+ +|+++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999999998 899999874
No 364
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.92 E-value=0.0089 Score=46.39 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|||+|..|..+|..|++.|.+|+++++...
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 5799999999999999999999999999998743
No 365
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.92 E-value=0.025 Score=50.02 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||.|-.|..+|..|++.|++|+++|+++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 35899999999999999999999999999998743
No 366
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.91 E-value=0.025 Score=49.56 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||.|-.|...|..|++.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998754
No 367
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.90 E-value=0.025 Score=53.30 Aligned_cols=34 Identities=24% Similarity=0.474 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999998754
No 368
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.90 E-value=0.028 Score=50.10 Aligned_cols=34 Identities=26% Similarity=0.597 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
..+|+|||+|..|.++|..|+..|+ +|+++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999997 899999753
No 369
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.90 E-value=0.03 Score=50.07 Aligned_cols=34 Identities=15% Similarity=0.066 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHH-HHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLT-TSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~-~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||.|.+|++ +|..|+++|++|++.|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 47999999999996 89999999999999998754
No 370
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.88 E-value=0.032 Score=48.71 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC---ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI---RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~---~V~v~E~~~~ 38 (409)
+.+|.|||+|-.|.++|..|++.|+ +|+++|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 4689999999999999999999999 9999998754
No 371
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.80 E-value=0.025 Score=49.57 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=31.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||.|-.|...|..|++.|++|+++|+++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 799999999999999999999999999998754
No 372
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.78 E-value=0.025 Score=53.46 Aligned_cols=37 Identities=22% Similarity=0.324 Sum_probs=32.5
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 2 ESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 2 ~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|.+.+|.|||+|..|..+|..|++.|++|++++|.+.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 3457999999999999999999999999999998753
No 373
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.78 E-value=0.035 Score=46.36 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|-.|..+|..|++.|++|.+++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNPK 62 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998743
No 374
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.78 E-value=0.02 Score=51.04 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcC-CceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLG-IRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g-~~V~v~E~~~~ 38 (409)
.+|.|||.|-.|..+|..|++.| ++|+++|+++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 57999999999999999999999 99999998853
No 375
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.72 E-value=0.029 Score=49.99 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=29.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..+|+|||+|-.|.++|..|++.|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 358999999999999999999999999999 653
No 376
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.71 E-value=0.033 Score=49.37 Aligned_cols=33 Identities=33% Similarity=0.436 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
.+|+|||+|-.|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 489999999999999999999997 999999874
No 377
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.68 E-value=0.033 Score=52.01 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=32.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6899999999999999999999999999999875
No 378
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.65 E-value=0.024 Score=52.49 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|-.|+.+|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 589999999999999999998 999999998754
No 379
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.61 E-value=0.034 Score=49.64 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4899999999999999999999999999998754
No 380
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.61 E-value=0.044 Score=51.72 Aligned_cols=35 Identities=20% Similarity=0.403 Sum_probs=32.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+++|||||+.|+-+|..|++.|.+|+++++.+.+
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 58999999999999999999999999999998754
No 381
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=94.59 E-value=0.033 Score=49.50 Aligned_cols=37 Identities=22% Similarity=0.493 Sum_probs=32.4
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
|.++.+|+|||+|-.|.++|..|+..++ ++.|+|.+.
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4556799999999999999999999886 899999753
No 382
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.57 E-value=0.035 Score=50.17 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
+.+|+|+|||-||..+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4689999999999999999999999 999999873
No 383
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.56 E-value=0.16 Score=44.65 Aligned_cols=33 Identities=9% Similarity=0.209 Sum_probs=26.1
Q ss_pred ccEEEECCCh-HHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGI-AGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~-aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+++|||||. +++.+|..+++.|.+|+++++..
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 4688888886 56788888888899999987653
No 384
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.55 E-value=0.038 Score=49.02 Aligned_cols=33 Identities=30% Similarity=0.453 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHc--CCceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~ 38 (409)
+|+|||+|-.|..+|..|++. |.+|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 799999999999999999985 789999998753
No 385
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.54 E-value=0.04 Score=48.94 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~~ 38 (409)
.+|.|||.|..|.++|..|++.|+ +|+++|+++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 589999999999999999999999 9999998753
No 386
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.53 E-value=0.03 Score=52.39 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|-.|+.+|..|++.|++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 699999999999999999999999999998753
No 387
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.52 E-value=0.032 Score=51.41 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|+|+|.+|+.+|..|...|.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998754
No 388
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.49 E-value=0.026 Score=50.18 Aligned_cols=31 Identities=19% Similarity=0.127 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHc-----C-CceEEEeC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL-----G-IRSMVLES 35 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~-----g-~~V~v~E~ 35 (409)
++|.|||+|..|.++|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999987
No 389
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.48 E-value=0.047 Score=47.65 Aligned_cols=34 Identities=29% Similarity=0.323 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..|+|.|+|..|..++..|.+.|++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5899999999999999999999999999998754
No 390
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.45 E-value=0.034 Score=49.42 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
.+|.|||.|..|..+|..|++.|+ +|+++|++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 589999999999999999999999 999999874
No 391
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.45 E-value=0.032 Score=50.04 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLES 35 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~ 35 (409)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 392
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.44 E-value=0.042 Score=51.76 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998864
No 393
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.37 E-value=0.031 Score=46.88 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=32.3
Q ss_pred CCCcccEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 1 MESVEDIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+....|+|.|| |..|..++..|.++|++|.++.|...
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 554468999996 99999999999999999999999754
No 394
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.34 E-value=0.038 Score=48.79 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4899999999999999999999999999998753
No 395
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.33 E-value=0.04 Score=50.53 Aligned_cols=35 Identities=26% Similarity=0.437 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|+|+|.+|+.+|..|...|.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999998754
No 396
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.33 E-value=0.024 Score=51.35 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcC-------CceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLG-------IRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g-------~~V~v~E~~~~ 38 (409)
..+|.|||+|-.|.++|..|++.| ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999999 89999998755
No 397
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.32 E-value=0.045 Score=51.70 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+.+|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~ 39 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTS 39 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998643
No 398
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.29 E-value=0.053 Score=51.44 Aligned_cols=35 Identities=29% Similarity=0.518 Sum_probs=32.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 58999999999999999999999999999998754
No 399
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.28 E-value=0.042 Score=49.89 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..|+|+|+|.+|.+++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 400
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.27 E-value=0.041 Score=48.27 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~~ 38 (409)
+|+|||+|..|.++|..|++.|+ +|+++|..+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~ 36 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence 79999999999999999999998 8999998753
No 401
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=94.24 E-value=0.048 Score=50.38 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=32.7
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
||+...|+|+|||..|..++..+.+.|++|.++| .+
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 5566799999999999999999999999999999 54
No 402
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.23 E-value=0.049 Score=51.68 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||.|..|..+|..|+++|++|+++++.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998754
No 403
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=94.21 E-value=0.055 Score=46.18 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC----ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI----RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~----~V~v~E~~~~ 38 (409)
.+|.|||+|-.|.+.|..|.+.|+ +|.++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 479999999999999999999998 9999998743
No 404
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.21 E-value=0.041 Score=49.00 Aligned_cols=32 Identities=28% Similarity=0.488 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999864
No 405
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.18 E-value=0.014 Score=48.95 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLES 35 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~ 35 (409)
.++|.|||.|..|.++|..|++.|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 46899999999999999999999999999987
No 406
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.18 E-value=0.042 Score=48.44 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|..|...|..|++.|++|.++|+++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 4899999999999999999999999999998643
No 407
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.17 E-value=0.038 Score=50.55 Aligned_cols=34 Identities=18% Similarity=-0.008 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcC-------CceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLG-------IRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g-------~~V~v~E~~~~ 38 (409)
.+|.|||+|-.|.++|..|++.| ++|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 37999999999999999999999 99999998754
No 408
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.14 E-value=0.048 Score=47.48 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|.|||+|..|.++|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998764
No 409
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.11 E-value=0.053 Score=48.96 Aligned_cols=34 Identities=24% Similarity=0.387 Sum_probs=31.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC-ceEEEeCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESS 36 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~ 36 (409)
.+.+|+|+|+|-+|..+|..|...|. +|+|+|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35689999999999999999999998 79999987
No 410
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.11 E-value=0.045 Score=47.77 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|.|||..|..++..|.++|++|+++.|+..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 4799999999999999999999999999998753
No 411
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.10 E-value=0.054 Score=47.39 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=30.6
Q ss_pred ccEEEECC-ChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|.|||+ |-.|..+|..|++.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 48999999 9999999999999999999999764
No 412
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.09 E-value=0.051 Score=45.10 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=29.9
Q ss_pred cEEEEC-CChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 6 DIVIVG-AGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 6 dv~IiG-~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|+||| +|-.|..+|..|++.|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999864
No 413
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.03 E-value=0.02 Score=48.49 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+..|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3579999999999999999999999 999998754
No 414
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.93 E-value=0.052 Score=46.76 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHcC-CceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLG-IRSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g-~~V~v~E~~~ 37 (409)
+|.|||+|-.|...|..|++.| ++|.++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999864
No 415
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.93 E-value=0.054 Score=47.94 Aligned_cols=33 Identities=18% Similarity=0.418 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~~ 38 (409)
+|+|||+|..|.++|..|++.|+ +|.++|....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 79999999999999999999997 8999998753
No 416
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.89 E-value=0.056 Score=47.65 Aligned_cols=34 Identities=29% Similarity=0.271 Sum_probs=31.0
Q ss_pred ccEEEEC-CChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVG-AGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG-~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.||| +|..|.++|..|++.|++|.++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3799999 999999999999999999999997643
No 417
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.88 E-value=0.076 Score=43.54 Aligned_cols=34 Identities=38% Similarity=0.456 Sum_probs=31.4
Q ss_pred ccEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..|+|.|| |-.|..++..|.+.|++|.++.|+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 58999999 99999999999999999999998754
No 418
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.87 E-value=0.063 Score=47.73 Aligned_cols=34 Identities=26% Similarity=0.574 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
..+|+|||+|..|.++|..|+..|+ +|.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 3689999999999999999999886 799999864
No 419
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.86 E-value=0.055 Score=47.22 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999997 7999998754
No 420
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.86 E-value=0.063 Score=48.90 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999764
No 421
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=93.86 E-value=0.059 Score=46.57 Aligned_cols=33 Identities=36% Similarity=0.558 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCc-eEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIR-SMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~-V~v~E~~~ 37 (409)
.+|.|||+|-.|...|..|++.|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5899999999999999999999999 89999764
No 422
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.85 E-value=0.058 Score=47.40 Aligned_cols=33 Identities=15% Similarity=0.266 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|-.|...|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999999999999999999999999998753
No 423
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.84 E-value=0.062 Score=48.18 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|.|||.|..|.++|..|++.|++|.++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999874
No 424
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.81 E-value=0.063 Score=47.74 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
..+|+|||+|..|.++|..|+..|+ ++.++|...
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 4689999999999999999999987 899999853
No 425
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.76 E-value=0.064 Score=50.77 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 426
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.73 E-value=0.069 Score=47.46 Aligned_cols=34 Identities=15% Similarity=0.381 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
..+|.|||+|..|..+|..|+..|+ +|.++|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 3589999999999999999999998 899999854
No 427
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=93.69 E-value=0.045 Score=48.96 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=32.5
Q ss_pred CCCcccEEEECC-ChHHHHHHHHHHHcCC-------ceEEEeCCC
Q 015303 1 MESVEDIVIVGA-GIAGLTTSLGLYRLGI-------RSMVLESSE 37 (409)
Q Consensus 1 m~~~~dv~IiG~-G~aGl~~A~~L~~~g~-------~V~v~E~~~ 37 (409)
|.++++|+|+|| |..|..++..|.+.|+ +|.++|+..
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 666679999998 9999999999999986 899999753
No 428
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.68 E-value=0.065 Score=49.66 Aligned_cols=34 Identities=24% Similarity=0.476 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||.|-.||.+|..|++.|++|+.+|-++.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 5899999999999999999999999999998753
No 429
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=93.67 E-value=0.071 Score=47.47 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|-.|+.+|..|++.|+ +++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 4689999999999999999999998 7999998764
No 430
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.66 E-value=0.06 Score=47.73 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHcC--CceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLG--IRSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g--~~V~v~E~~~ 37 (409)
+|+|||+|-.|.++|..|++.| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 7999999999999999999999 6899999864
No 431
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.65 E-value=0.058 Score=47.19 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|..|...|..|++ |++|+++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 69999999999999999999 999999998743
No 432
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.64 E-value=0.064 Score=47.26 Aligned_cols=34 Identities=35% Similarity=0.616 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~~ 38 (409)
.+|+|||+|..|..+|..|+..|+ +|+|+|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 589999999999999999999998 9999998754
No 433
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.62 E-value=0.057 Score=51.08 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~~ 38 (409)
.+|.|||+|-.|+.+|..|++. |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4899999999999999999998 799999998753
No 434
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.56 E-value=0.076 Score=48.47 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|+|+|..|..+|..|+..|.+|+++|++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 435
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.56 E-value=0.048 Score=50.31 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|-.|+.+|..|++ |++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~ 33 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPS 33 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHH
Confidence 69999999999999999999 999999998753
No 436
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.55 E-value=0.084 Score=45.75 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..|+|+|+|-+|.++|..|++.|.+|++++|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999998763
No 437
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.54 E-value=0.055 Score=47.64 Aligned_cols=34 Identities=26% Similarity=0.332 Sum_probs=28.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.+||-|..|...|..|.+.|++|+++|+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998765
No 438
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.47 E-value=0.076 Score=46.26 Aligned_cols=32 Identities=25% Similarity=0.419 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+|.|||+|..|.++|..|++.|+ +|+++|+++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 79999999999999999999998 899999764
No 439
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.44 E-value=0.085 Score=47.91 Aligned_cols=34 Identities=15% Similarity=0.418 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..|+|+|||..|..+|+.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3799999999999999999999999999998765
No 440
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=93.41 E-value=0.076 Score=45.44 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 3589999999999999999999998 7999998754
No 441
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.35 E-value=0.097 Score=45.07 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|+|+|-+|.++|..|++.|.+|+|+.|...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998754
No 442
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.34 E-value=0.094 Score=46.74 Aligned_cols=33 Identities=15% Similarity=0.403 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceEEEeCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESS 36 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~ 36 (409)
..+|+|||+|-.|.++|+.|+..|+ ++.|+|..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 4689999999999999999999997 89999975
No 443
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.33 E-value=0.1 Score=51.94 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=32.0
Q ss_pred ccEEEEC--CChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 5 EDIVIVG--AGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 5 ~dv~IiG--~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+|+||| +|..|+-+|..|++.|.+|+++++.+..
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 4699999 9999999999999999999999988654
No 444
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.32 E-value=0.097 Score=43.48 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=30.2
Q ss_pred cEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 6999996 99999999999999999999998753
No 445
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.32 E-value=0.076 Score=49.84 Aligned_cols=34 Identities=26% Similarity=0.191 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||||.+|...+..|.+.|.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4689999999999999999999999999999753
No 446
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.32 E-value=0.08 Score=49.51 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999864
No 447
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.31 E-value=0.096 Score=46.94 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=30.7
Q ss_pred CcccEEEECC-ChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 3 SVEDIVIVGA-GIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 3 ~~~dv~IiG~-G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
...+|+|||+ |-.|.++|..|+..|+ +|+++|...
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 3468999997 9999999999999985 899999753
No 448
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.30 E-value=0.08 Score=50.02 Aligned_cols=33 Identities=24% Similarity=0.465 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 379999999999999999999999999999864
No 449
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.23 E-value=0.046 Score=50.52 Aligned_cols=31 Identities=23% Similarity=0.157 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHH-cCCceEEEeC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYR-LGIRSMVLES 35 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~-~g~~V~v~E~ 35 (409)
++|+|||+|-.|.++|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 489999999999999999998 5999999993
No 450
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.16 E-value=0.1 Score=44.03 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=31.9
Q ss_pred cccEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|.|| |-.|..++..|+++|++|+++.|+..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 458999998 99999999999999999999998754
No 451
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=93.15 E-value=0.11 Score=47.43 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|+|+|..|..++..+.+.|++|.++|..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 35899999999999999999999999999998654
No 452
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.13 E-value=0.11 Score=47.63 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|+|+|..|..+|..+.+.|++|.++|..+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 35799999999999999999999999999997653
No 453
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=93.09 E-value=0.1 Score=46.92 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..|.|||+|..|.++|..|++.|++|+++++...
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 4799999999999999999999999999998743
No 454
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.03 E-value=0.094 Score=46.09 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
..|+|+|+|.+|.++|..|++.|. +|+|++|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 579999999999999999999998 899999874
No 455
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.02 E-value=0.077 Score=52.88 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4799999999999999999999999999998754
No 456
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.02 E-value=0.088 Score=46.10 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRL--GIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~--g~~V~v~E~~~ 37 (409)
.+|.|||+|-.|.++|..|++. |.+|.++|+++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5899999999999999999988 57899998763
No 457
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.00 E-value=0.11 Score=45.48 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=30.8
Q ss_pred cEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 6 DIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 6999999 99999999999999999999998754
No 458
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=92.95 E-value=0.13 Score=46.12 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=33.2
Q ss_pred CCCcccEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 1 MESVEDIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++...|+|.|| |..|..++..|++.|++|+++++...
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 555578999995 99999999999999999999998754
No 459
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.95 E-value=0.11 Score=43.23 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=29.9
Q ss_pred cEEEECC-ChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 6 DIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|+|.|| |..|..++..|.++|++|.++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999864
No 460
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=92.94 E-value=0.12 Score=45.45 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|.|||+|..|..+|..|...|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 461
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.93 E-value=0.11 Score=46.00 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=32.2
Q ss_pred cccEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|.|| |..|..++..|.+.|++|++++|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 468999999 99999999999999999999998765
No 462
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.92 E-value=0.12 Score=45.62 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|.|||+|..|..+|..|...|.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 463
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=92.89 E-value=0.1 Score=47.82 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3589999999999999999999999999999864
No 464
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.88 E-value=0.1 Score=47.15 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 3589999999999999999999998 7999998754
No 465
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.86 E-value=0.099 Score=45.42 Aligned_cols=33 Identities=21% Similarity=0.403 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|||+|-+|.++|..|.+.|.+|++++|..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999999874
No 466
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.83 E-value=0.084 Score=45.35 Aligned_cols=33 Identities=24% Similarity=0.192 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|.|||+|-.|...|..|++.|.+|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 489999999999999999999999999999864
No 467
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.73 E-value=0.11 Score=49.03 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|||+|..|..+|..|+..|.+|+++|+.+.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998743
No 468
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.68 E-value=0.091 Score=45.25 Aligned_cols=30 Identities=17% Similarity=0.178 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLES 35 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~ 35 (409)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999876
No 469
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.56 E-value=0.099 Score=45.34 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..|+|+|+|-+|.++|..|++.|.+|+|++|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 579999999999999999999999999999874
No 470
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.56 E-value=0.11 Score=45.09 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..|+|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 579999999999999999999998 8999998754
No 471
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.52 E-value=0.078 Score=46.52 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|-.|...|..|++.|++|++++ ++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGP 36 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHH
Confidence 479999999999999999999999999998 543
No 472
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.51 E-value=0.13 Score=45.85 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+.+|+|||+|-.|.++|..|+..++ ++.|+|.+.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4689999999999999999999886 799999753
No 473
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.48 E-value=0.13 Score=49.89 Aligned_cols=35 Identities=29% Similarity=0.343 Sum_probs=32.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
..|+|||+|..|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 47999999999999999999999999999998763
No 474
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=92.46 E-value=0.094 Score=52.20 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4799999999999999999999999999998754
No 475
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.45 E-value=0.085 Score=47.18 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=29.9
Q ss_pred cccEEEECC-ChHHHHHHHHHHHcCC-------ceEEEeCC
Q 015303 4 VEDIVIVGA-GIAGLTTSLGLYRLGI-------RSMVLESS 36 (409)
Q Consensus 4 ~~dv~IiG~-G~aGl~~A~~L~~~g~-------~V~v~E~~ 36 (409)
+.+|+|+|| |..|.+++..|+..|+ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 479999998 9999999999999886 79999976
No 476
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.45 E-value=0.15 Score=43.63 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
.|+|||+|-+|.+++..|++.|. +|+|++|...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 79999999999999999999998 8999998753
No 477
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=92.44 E-value=0.13 Score=45.52 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
+|+|||+|..|.++|..|+..|+ +|.|+|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999898 699999874
No 478
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=92.42 E-value=0.15 Score=46.49 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 3 SVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 3 ~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
....++|+|||..|.++|..++..|++|+|+|.++.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 346899999999999999999999999999998765
No 479
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.31 E-value=0.15 Score=44.84 Aligned_cols=38 Identities=26% Similarity=0.412 Sum_probs=32.4
Q ss_pred CCCcccEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 1 MESVEDIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+....|+|+|| |-.|..++..|.+.|++|.++.|...
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 39 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST 39 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 543457999998 99999999999999999999998754
No 480
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=92.20 E-value=0.17 Score=46.97 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..+|+|+|+|..|..++..+.+.|++|.++|..+
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3589999999999999999999999999999764
No 481
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=92.11 E-value=0.16 Score=43.76 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|+|||+|-+|.+.|..|.+.|.+|++++|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 482
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.08 E-value=0.16 Score=44.78 Aligned_cols=38 Identities=29% Similarity=0.371 Sum_probs=32.4
Q ss_pred CCCcccEEEECC-ChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 1 MESVEDIVIVGA-GIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+....|+|+|| |-.|..++..|.+.|++|.++.|+..
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV 39 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCc
Confidence 543468999997 99999999999999999999998754
No 483
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=92.06 E-value=0.15 Score=48.98 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|-.|+.+|..|++.|+ +++|+|.+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 3589999999999999999999998 7999998764
No 484
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=91.28 E-value=0.028 Score=46.34 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||+|-.|.++|..|.+.|++|+++++...
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 35799999999999999999999999999998654
No 485
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.93 E-value=0.19 Score=44.43 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3579999999999999999999998 899999873
No 486
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=91.90 E-value=0.19 Score=43.80 Aligned_cols=34 Identities=26% Similarity=0.426 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...|+|+|+|-+|.+++..|++.|. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3579999999999999999999998 699998874
No 487
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.88 E-value=0.16 Score=44.45 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceEEEeCCC
Q 015303 6 DIVIVGAGIAGLTTSLGLYRLGI--RSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+|.|||+|-.|.++|+.|+.+++ ++.|+|...
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 79999999999999999998885 799999764
No 488
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=91.81 E-value=0.16 Score=45.70 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 4689999999999999999999998 7999997753
No 489
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=91.81 E-value=0.15 Score=45.17 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=29.4
Q ss_pred cEEEECC-ChHHHHHHHHHHHcC--CceEEEeCCC
Q 015303 6 DIVIVGA-GIAGLTTSLGLYRLG--IRSMVLESSE 37 (409)
Q Consensus 6 dv~IiG~-G~aGl~~A~~L~~~g--~~V~v~E~~~ 37 (409)
+|+|||| |-.|..+|..|+..| .+|.++|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 999999999999988 5899999875
No 490
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=91.74 E-value=0.19 Score=46.90 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=36.1
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceEEEeCCCCc
Q 015303 1 MESVEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSESL 39 (409)
Q Consensus 1 m~~~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
|+.++||+|||||++|+++|..|++.|++|+|+|+++.+
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 41 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYY 41 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCc
Confidence 667799999999999999999999999999999998754
No 491
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=91.73 E-value=0.12 Score=46.34 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...++|+|||..+.++|..++..|++|+|+|.++.
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~ 233 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPN 233 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcc
Confidence 45899999999999999999999999999998765
No 492
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=91.72 E-value=0.18 Score=44.12 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=32.0
Q ss_pred CCCcccEEEECC-ChHHHHHHHHHHHcC-CceEEEeCCCC
Q 015303 1 MESVEDIVIVGA-GIAGLTTSLGLYRLG-IRSMVLESSES 38 (409)
Q Consensus 1 m~~~~dv~IiG~-G~aGl~~A~~L~~~g-~~V~v~E~~~~ 38 (409)
|+++..|+|.|| |-.|..++..|.+.| ++|.++.|++.
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~ 41 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR 41 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC
Confidence 444468999999 999999999999999 99999998754
No 493
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.72 E-value=0.13 Score=47.73 Aligned_cols=34 Identities=24% Similarity=0.483 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
-+.-|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3688999999999999999999999999999864
No 494
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=91.69 E-value=0.15 Score=46.93 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...|+|||+|..|.++|..|+..|. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899999763
No 495
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=91.66 E-value=0.12 Score=51.43 Aligned_cols=34 Identities=24% Similarity=0.474 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceEEEeCCCC
Q 015303 5 EDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSES 38 (409)
Q Consensus 5 ~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|.-.|..++..|++|+|+|..+.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 4899999999999999999999999999998754
No 496
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.65 E-value=0.14 Score=45.57 Aligned_cols=35 Identities=14% Similarity=0.075 Sum_probs=30.5
Q ss_pred cccEEEEC-CChHHHHHHHHHHHcC--CceEEEeCCCC
Q 015303 4 VEDIVIVG-AGIAGLTTSLGLYRLG--IRSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG-~G~aGl~~A~~L~~~g--~~V~v~E~~~~ 38 (409)
+.+|+|+| +|..|.+++..|+..| .+|.++|....
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~ 45 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA 45 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence 36899999 7999999999999988 68999997643
No 497
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.64 E-value=0.2 Score=43.53 Aligned_cols=34 Identities=18% Similarity=0.013 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...|+|+|+|-+|.+++..|++.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3589999999999999999999998 899999774
No 498
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=91.54 E-value=0.16 Score=48.64 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSES 38 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 3589999999999999999999998 7999997753
No 499
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=91.42 E-value=0.2 Score=46.10 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGIRSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 3589999999999999999999999999999865
No 500
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=91.41 E-value=0.23 Score=42.94 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceEEEeCCC
Q 015303 4 VEDIVIVGAGIAGLTTSLGLYRLGI-RSMVLESSE 37 (409)
Q Consensus 4 ~~dv~IiG~G~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3579999999999999999999996 899998864
Done!