BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015304
(409 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50134|DCOR_DATST Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1
Length = 431
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/400 (55%), Positives = 288/400 (72%), Gaps = 11/400 (2%)
Query: 5 RVTTVVTKEELTEFVRSTILKRQEFDEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKC 64
R ++++ L +F+ S I ++ + ++ PFY+LDLG VV+L +Q + LP I P YAVKC
Sbjct: 36 RKVVPLSRDALQDFMVSIITQKLQDEKQPFYVLDLGEVVSLMDQWNAGLPNIRPFYAVKC 95
Query: 65 NPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNL 124
NPEP+ L L+A+GSNFDCASR+EIE VL+LG+SPDRI++ANPCKP S I +AA VGVNL
Sbjct: 96 NPEPSFLSMLSAMGSNFDCASRAEIEYVLSLGISPDRIVFANPCKPESDIIFAAKVGVNL 155
Query: 125 TTFDSVEELHKIRKWHPKCDLLIRIKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEAS 184
TTFDS +E++KIRK HPKC+LL+RIKP DD A+ P+ KYG P+E+ PLL A+A+
Sbjct: 156 TTFDSEDEVYKIRKHHPKCELLLRIKPMDDGNARCPMGPKYGA--LPEEVEPLLRTAQAA 213
Query: 185 GLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTK 244
L+V GV+FHIGS AY GAIAAAK VFETAAR G +KM VLDIGGGF ++
Sbjct: 214 RLTVSGVSFHIGSGDADSKAYLGAIAAAKGVFETAARFGMSKMTVLDIGGGF----TSGH 269
Query: 245 SFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNY 304
F A++ ++ AL +F +E L +I+EPGRFF +AFTL T IIGKRV GE+R Y
Sbjct: 270 QFTTASAAVRSALEQHFHDE----QELTIIAEPGRFFAETAFTLATTIIGKRVRGELREY 325
Query: 305 WINDGKYGSFDWVNYDEAIAKCTPLTLASSLTT-SKGLSRTYNSKVFGPTCDAADEVFSG 363
WINDG YGS + V YD A TPL S+ + + G S+T+ S VFGPTCDA D V
Sbjct: 326 WINDGLYGSMNCVLYDHATVNATPLACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRD 385
Query: 364 HKLPELEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYV 403
++LPEL+V DWL+F MGAYT+A G+NFNG+NT+AI T++
Sbjct: 386 YQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSAIVTHL 425
>sp|O22616|DCOR_SOLLC Ornithine decarboxylase OS=Solanum lycopersicum GN=ODC PE=2 SV=2
Length = 431
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/403 (55%), Positives = 283/403 (70%), Gaps = 11/403 (2%)
Query: 2 GGQRVTTVVTKEELTEFVRSTILKRQEFDEVPFYILDLGVVVTLYNQMISKLPMIHPHYA 61
G R ++K+ L +F+ S I ++ + D+ PFY+LDLG VV+L Q S LP I P YA
Sbjct: 33 GHTRKVVPLSKDALQDFMVSIITQKLQDDKQPFYVLDLGEVVSLMEQWNSALPNIRPFYA 92
Query: 62 VKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVG 121
VKCNPEP+ L L+A+GSNFDCASR+EIE VL+ G+SPDRI++ANPCKP S I +A +G
Sbjct: 93 VKCNPEPSFLSMLSAMGSNFDCASRAEIEYVLSHGISPDRIVFANPCKPESDIIFAEKIG 152
Query: 122 VNLTTFDSVEELHKIRKWHPKCDLLIRIKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAA 181
VNLTT+DS +E++KIRK HPKC+LL+RIKP D A+ P+ KYG P+EI PLL A
Sbjct: 153 VNLTTYDSEDEVYKIRKHHPKCELLLRIKPMTDGNARCPMGPKYGA--LPEEIEPLLRTA 210
Query: 182 EASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNS 241
+A+ L+V GV+FHIGS AY GAIAAAK VFETAA+LG KM VLDIGGGF +
Sbjct: 211 QAARLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAQLGMPKMTVLDIGGGF----T 266
Query: 242 NTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEM 301
+ F AA +K AL +F + P L +I+EPGRFF +AFTL T IIGKRV GE+
Sbjct: 267 SGHQFTTAAPAVKSALETHFHD--FP--ELTIIAEPGRFFAETAFTLATTIIGKRVRGEL 322
Query: 302 RNYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTT-SKGLSRTYNSKVFGPTCDAADEV 360
+ YWINDG YGS + V YD A TPL S+ + G S+T+ S VFGPTCDA D V
Sbjct: 323 KEYWINDGLYGSMNCVLYDHATVTATPLACMSNRNNLNCGGSKTFPSTVFGPTCDALDTV 382
Query: 361 FSGHKLPELEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYV 403
++LPEL+V DWL+F MGAYT+A G+NFNG+NT+AI T++
Sbjct: 383 LRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSAIVTHL 425
>sp|Q8S3N2|DCOR_CAPAN Ornithine decarboxylase OS=Capsicum annuum GN=ODC PE=2 SV=1
Length = 435
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/400 (53%), Positives = 283/400 (70%), Gaps = 11/400 (2%)
Query: 5 RVTTVVTKEELTEFVRSTILKRQEFDEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKC 64
R ++K+ L +F+ S I ++ + ++ PFY+LDLG VV+L +Q LP + P YAVKC
Sbjct: 40 RKVVPLSKDALQDFMVSIITQKLQGEKKPFYVLDLGEVVSLMDQWNVALPNVRPFYAVKC 99
Query: 65 NPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNL 124
NPEP+ L LAA+GSNF CASR+EIE VL+LG+SP+RI++ANPCKP S I +A VGVNL
Sbjct: 100 NPEPSFLSMLAAMGSNFVCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKVGVNL 159
Query: 125 TTFDSVEELHKIRKWHPKCDLLIRIKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEAS 184
TT+DS +E++KI+K HPKC+LL+RIKP +D A+ P+ KYG P+EI PLL A+AS
Sbjct: 160 TTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKYGA--LPEEIEPLLRIAQAS 217
Query: 185 GLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTK 244
L+V GV+FHIGS AY GAIAAAK VFETAA+ G +KM VLDIGGGF ++
Sbjct: 218 RLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAKFGMSKMNVLDIGGGF----TSGH 273
Query: 245 SFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNY 304
F AA+ +K AL +F NE L +I+EPGRFF +AFTL T IIGKRV G++R Y
Sbjct: 274 QFTTAATAVKSALQQHFSNE----PELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREY 329
Query: 305 WINDGKYGSFDWVNYDEAIAKCTPLT-LASSLTTSKGLSRTYNSKVFGPTCDAADEVFSG 363
WINDG YGS + V YD A TPL +++ + + S+ + S +FGPTCDA D V
Sbjct: 330 WINDGLYGSMNCVLYDHATVTATPLACMSNRVNLNCSGSKMFPSTIFGPTCDALDTVLRD 389
Query: 364 HKLPELEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYV 403
+ +PEL+V DW++F MGAYT+A G+NFNG+NT+AI T++
Sbjct: 390 YHVPELQVNDWVIFPNMGAYTKAAGSNFNGFNTSAIVTHL 429
>sp|P07805|DCOR_TRYBB Ornithine decarboxylase OS=Trypanosoma brucei brucei PE=1 SV=2
Length = 423
Score = 293 bits (749), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 235/398 (59%), Gaps = 35/398 (8%)
Query: 33 PFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAV 92
PF++ DLG +V + LP + P YAVKCN + +L LAALG+ FDCAS +EI+ V
Sbjct: 37 PFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRV 96
Query: 93 LALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPP 152
+GV P++IIYANPCK +SHI+YA + GV++ TFD V+EL K+ K HPK +++RI
Sbjct: 97 RGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS-T 155
Query: 153 DDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAA 212
DDS A+ L K+G ++ +LE A+ + V GV+FH+GS +T + + AI+ +
Sbjct: 156 DDSLARCRLSVKFGA--KVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDS 213
Query: 213 KAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLR 272
+ VF+ LG N M +LDIGGGF T F+E A +I AL +FP +L L
Sbjct: 214 RFVFDMGTELGFN-MHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDL----KLT 268
Query: 273 VISEPGRFFTYSAFTLYTQIIGKRV----------HGEMRN----YWINDGKYGSFDWVN 318
+++EPGR++ SAFTL +I K+V H E Y++NDG YGSF+ +
Sbjct: 269 IVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCIL 328
Query: 319 YDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFS 378
YD A+ + PL + K Y S V+GPTCD D++ + LPE++V +WL+F
Sbjct: 329 YDHAVVR--PLPQREPIPNEK----LYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFE 382
Query: 379 EMGAYTRARGTNFNGYNTAAI-------PTYVVRSNRT 409
+MGAYT ++FNG+ + I P +VVR ++
Sbjct: 383 DMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRELKS 420
>sp|P27117|DCOR_BOVIN Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1
Length = 461
Score = 291 bits (745), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 166/394 (42%), Positives = 230/394 (58%), Gaps = 30/394 (7%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
D+ FY+ DLG ++ + + + LP + P YAVKCN +++ LAA+G+ FDCAS++EI
Sbjct: 36 DKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEI 95
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ V +LGV P+RIIYANPCK VS IKYAAN GV + TFDS EL K+ + HPK L++RI
Sbjct: 96 QLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRI 155
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A L K+G + LLE A+ + V+GV+FH+GS T + AI
Sbjct: 156 A-TDDSKAVCRLSVKFGATLKTSRL--LLERAKELDIDVIGVSFHVGSGCTDPETFVQAI 212
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
+ A+ VF+ A +G N M +LDIGGGF + F+E S+I AL YFP++ S
Sbjct: 213 SDARCVFDMGAEVGFN-MYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSD----S 267
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRN--------------YWINDGKYGSFD 315
+R+I+EPGR++ SAFTL II K++ + + Y++NDG YGSF+
Sbjct: 268 GVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSFN 327
Query: 316 WVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWL 375
+ YD A K PL K + Y+S ++GPTCD D + LPE+ V DW+
Sbjct: 328 CILYDHAHVK--PLLQKR----PKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWM 381
Query: 376 VFSEMGAYTRARGTNFNGYNTAAIPTYVVRSNRT 409
+F MGAYT A + FNG+ I Y V S T
Sbjct: 382 LFENMGAYTVAAASTFNGFQRPTI--YYVMSGPT 413
>sp|P11926|DCOR_HUMAN Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2
Length = 461
Score = 289 bits (740), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 224/384 (58%), Gaps = 28/384 (7%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
D+ FY+ DLG ++ + + + LP + P YAVKCN A+++ LAA G+ FDCAS++EI
Sbjct: 36 DKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEI 95
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ V +LGV P+RIIYANPCK VS IKYAAN GV + TFDS EL K+ + HPK L++RI
Sbjct: 96 QLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRI 155
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A L K+G + LLE A+ + VVGV+FH+GS T + AI
Sbjct: 156 A-TDDSKAVCRLSVKFGATLRTSRL--LLERAKELNIDVVGVSFHVGSGCTDPETFVQAI 212
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
+ A+ VF+ A +G + M +LDIGGGF + F+E +I AL YFP++ S
Sbjct: 213 SDARCVFDMGAEVGFS-MYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD----S 267
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKRV--------------HGEMRNYWINDGKYGSFD 315
+R+I+EPGR++ SAFTL II K++ + Y++NDG YGSF+
Sbjct: 268 GVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFN 327
Query: 316 WVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWL 375
+ YD A K PL K + Y+S ++GPTCD D + LPE+ V DW+
Sbjct: 328 CILYDHAHVK--PLL----QKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 381
Query: 376 VFSEMGAYTRARGTNFNGYNTAAI 399
+F MGAYT A + FNG+ I
Sbjct: 382 LFENMGAYTVAAASTFNGFQRPTI 405
>sp|P27118|DCOR_CHICK Ornithine decarboxylase (Fragment) OS=Gallus gallus GN=ODC1 PE=2
SV=1
Length = 450
Score = 287 bits (735), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 224/384 (58%), Gaps = 28/384 (7%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
D+ FY+ DLG +V + + LP + P YAVKCN A+++ LA LG+ FDCAS++EI
Sbjct: 26 DKDAFYVADLGDIVKKHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEI 85
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ V ++GV P+RIIYANPCK +S IK+AAN GV + TFDS EL KI + HPK LL+RI
Sbjct: 86 QLVQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHPKAKLLLRI 145
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A L K+G + LLE A+ L++VGV+FH+GS T + AI
Sbjct: 146 T-TDDSKAVCRLSVKFGATLKTSRL--LLERAKELDLAIVGVSFHVGSGCTDPETFVQAI 202
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
+ A+ VF+ A LG N M +LDIGGGF + F+E S+I AL YFP + S
Sbjct: 203 SDARCVFDMGAELGFN-MYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLD----S 257
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKR--------------VHGEMRNYWINDGKYGSFD 315
+ +I+EPGR++ SAFTL II K+ V+ + Y++NDG YGSF+
Sbjct: 258 EVTIIAEPGRYYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSFN 317
Query: 316 WVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWL 375
+ YD A K P+ L G Y+ ++GPTCD D + +PEL+V DW+
Sbjct: 318 CILYDHAHVK--PV-LQKRPKPDDG---CYSCSIWGPTCDGLDRIVERCNMPELQVGDWI 371
Query: 376 VFSEMGAYTRARGTNFNGYNTAAI 399
+F MGAYT A + FNG+ I
Sbjct: 372 LFENMGAYTVAAASTFNGFQRPTI 395
>sp|P09057|DCOR_RAT Ornithine decarboxylase OS=Rattus norvegicus GN=Odc1 PE=1 SV=1
Length = 461
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 225/391 (57%), Gaps = 28/391 (7%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
D+ FY+ DLG V+ + + + LP + P YAVKCN A++ LAA+G+ FDCAS++EI
Sbjct: 36 DKDAFYVADLGDVLKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEI 95
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ V LGV P+RIIYANPCK VS IKYAA+ GV + TFDS EL K+ + HPK L++RI
Sbjct: 96 QLVQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRI 155
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A L K+G + LLE A+ + V+GV+FH+GS T + A+
Sbjct: 156 -ATDDSKAVCRLSVKFGATLKTSRL--LLERAKELNIDVIGVSFHVGSGCTDPETFVQAV 212
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
+ A+ VF+ +G + M +LDIGGGF + F+E S+I AL YFP++ S
Sbjct: 213 SDARCVFDMGTEVGFS-MYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD----S 267
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKRV--------------HGEMRNYWINDGKYGSFD 315
+R+I+EPGR++ SAFTL II K+ + + Y++NDG YGSF+
Sbjct: 268 GVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSFN 327
Query: 316 WVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWL 375
+ YD A K A K + Y+S ++GPTCD D + LPE+ V DW+
Sbjct: 328 CILYDHAHVK------ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWM 381
Query: 376 VFSEMGAYTRARGTNFNGYNTAAIPTYVVRS 406
+F MGAYT A + FNG+ I + RS
Sbjct: 382 LFENMGAYTVAAASTFNGFQRPNIYYVMSRS 412
>sp|Q9I8S4|DCOR2_XENLA Ornithine decarboxylase 2 OS=Xenopus laevis GN=odc1-b PE=2 SV=1
Length = 456
Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 228/385 (59%), Gaps = 26/385 (6%)
Query: 27 QEFDEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASR 86
Q D F++ DLG VV + + + LP + P YAVKCN +++ LA LG+ FDCAS+
Sbjct: 32 QTEDRDAFFVADLGDVVRKHLRFLKALPRVKPFYAVKCNSSKGVVKILAELGAGFDCASK 91
Query: 87 SEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLL 146
+EIE V +GV+P+RIIYANPCK +S IKYAA GV + TFD+ EL K+ + HP ++
Sbjct: 92 TEIELVQDVGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMV 151
Query: 147 IRIKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYR 206
+RI DDS + L K+G + LLE A+ + V+GV+FH+GS T AY
Sbjct: 152 LRI-ATDDSKSSARLSVKFGAPL--KSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYT 208
Query: 207 GAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELL 266
AI+ A+ VFE A+ G KM +LDIGGGF T + F+E A +I AL YFP
Sbjct: 209 QAISDARLVFEMASEFG-YKMWLLDIGGGFPGTEDSKIRFEEIAGVINPALDMYFPE--- 264
Query: 267 PGSSLRVISEPGRFFTYSAFTLYTQIIGKR-----VHGEMRN-------YWINDGKYGSF 314
S +++I+EPGR++ SAF+L +I K+ V + N Y++NDG YGSF
Sbjct: 265 -SSDVQIIAEPGRYYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIMYYVNDGVYGSF 323
Query: 315 DWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDW 374
+ + +D A K P+ L + + L Y S ++GPTCD D++ +LPEL V DW
Sbjct: 324 NCLVFDHAHPK--PI-LHKKPSPDQPL---YTSSLWGPTCDGLDQIAERVQLPELHVGDW 377
Query: 375 LVFSEMGAYTRARGTNFNGYNTAAI 399
L+F MGAYT A +NFNG+ + +
Sbjct: 378 LLFENMGAYTIAASSNFNGFQQSPV 402
>sp|P27119|DCOR_MUSPA Ornithine decarboxylase OS=Mus pahari GN=Odc1 PE=2 SV=1
Length = 461
Score = 285 bits (729), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 221/384 (57%), Gaps = 28/384 (7%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
D+ FY+ DLG ++ + + + LP + P YAVKCN A++ LAA G+ FDCAS++EI
Sbjct: 36 DKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEI 95
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ V LGV P+RIIYANPCK VS IKYAA+ GV + TFDS EL K+ + HPK L++RI
Sbjct: 96 QLVQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEIELMKVARAHPKAKLVLRI 155
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A L K+G + LLE A+ + V+GV+FH+GS T + A+
Sbjct: 156 A-TDDSKAVCRLSVKFGATLKTSRL--LLERAKELNIDVIGVSFHVGSGCTDPETFVQAV 212
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
+ A+ VF+ +G + M +LDIGGGF + F+E S+I AL YFP++ S
Sbjct: 213 SDARCVFDMGTEVGFS-MYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD----S 267
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKRV--------------HGEMRNYWINDGKYGSFD 315
+R+I+EPGR++ SAFTL II K+ + + Y++NDG YGSF+
Sbjct: 268 GVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFN 327
Query: 316 WVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWL 375
+ YD A K A K + Y+S ++GPTCD D + LPE+ V DW+
Sbjct: 328 CILYDHAHVK------ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWM 381
Query: 376 VFSEMGAYTRARGTNFNGYNTAAI 399
+F MGAYT A + FNG+ I
Sbjct: 382 LFENMGAYTVAAASTFNGFQRPNI 405
>sp|P27120|DCOR1_XENLA Ornithine decarboxylase 1 OS=Xenopus laevis GN=odc1-a PE=2 SV=1
Length = 460
Score = 285 bits (728), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 225/382 (58%), Gaps = 31/382 (8%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
D+ FY+ D G +V + + LP + P YAVKCN A+++ L+ LG+ FDCAS++EI
Sbjct: 36 DKDAFYVADFGDIVKKHVRWFKALPRVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEI 95
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ V ++GVSP+RIIYANPCK VS IKYAA+ GV TFDS EL K+ + HP L++RI
Sbjct: 96 QLVQSIGVSPERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRI 155
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A L K+G + LLE A+ + ++GV+FH+GS T Y A+
Sbjct: 156 -ATDDSKAVCRLSVKFGATLKTSRL--LLERAKELNVDIIGVSFHVGSGCTDPQTYVQAV 212
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
+ A+ VF+ A LG N M +LDIGGGF + F+E S+I AL YFP + S
Sbjct: 213 SDARCVFDMGAELGFN-MHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD----S 267
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKRV---------------HGEMRNYWINDGKYGSF 314
+++I+EPGR++ S+FTL II K+V + + Y++NDG YGSF
Sbjct: 268 GVKIIAEPGRYYVASSFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSF 327
Query: 315 DWVNYDEAIAKCTPLTLASSLTTS-KGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTD 373
+ + +D A K P+ LT K + Y+S ++GPTCD D + +LPEL+V D
Sbjct: 328 NCILFDHAHVK--PV-----LTKKPKPDEKFYSSSIWGPTCDGLDRIVERFELPELQVGD 380
Query: 374 WLVFSEMGAYTRARGTNFNGYN 395
W++F MGAYT A + FNG+
Sbjct: 381 WMLFENMGAYTVAAASTFNGFQ 402
>sp|P00860|DCOR_MOUSE Ornithine decarboxylase OS=Mus musculus GN=Odc1 PE=1 SV=2
Length = 461
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 222/384 (57%), Gaps = 28/384 (7%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
D+ FY+ DLG ++ + + + LP + P YAVKCN A++ LAA+G+ FDCAS++EI
Sbjct: 36 DKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEI 95
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ V LGV +R+IYANPCK VS IKYAA+ GV + TFDS EL K+ + HPK L++RI
Sbjct: 96 QLVQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRI 155
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A L K+G + LLE A+ + V+GV+FH+GS T + A+
Sbjct: 156 A-TDDSKAVCRLSVKFGATLKTSRL--LLERAKELNIDVIGVSFHVGSGCTDPETFVQAV 212
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
+ A+ VF+ A +G + M +LDIGGGF + F+E S+I AL YFP++ S
Sbjct: 213 SDARCVFDMATEVGFS-MHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD----S 267
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKRV--------------HGEMRNYWINDGKYGSFD 315
+R+I+EPGR++ SAFTL II K+ + + Y++NDG YGSF+
Sbjct: 268 GVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFN 327
Query: 316 WVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWL 375
+ YD A K A K + Y+S ++GPTCD D + LPE+ V DW+
Sbjct: 328 CILYDHAHVK------ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWM 381
Query: 376 VFSEMGAYTRARGTNFNGYNTAAI 399
+F MGAYT A + FNG+ I
Sbjct: 382 LFENMGAYTVAAASTFNGFQRPNI 405
>sp|P08432|DCOR_YEAST Ornithine decarboxylase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SPE1 PE=1 SV=1
Length = 466
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 238/393 (60%), Gaps = 33/393 (8%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
+E F+I DLG V L+N + +LP I P YAVKCNP+ +L LA LG NFDCAS+ EI
Sbjct: 83 EENSFFICDLGEVKRLFNNWVKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEI 142
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ VL++ +SPDRI+YANPCK S I+YAA+ V +TFD+VEELHKI+K+HP+ LL+RI
Sbjct: 143 DRVLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRI 202
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A+ L +KYG + ++ LL+A + GL++ GV+FH+GS A+ F + A+
Sbjct: 203 -ATDDSTAQCRLSTKYGCEMENVDV--LLKAIKELGLNLAGVSFHVGSGASDFTSLYKAV 259
Query: 210 AAAKAVFETAA-RLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPG 268
A+ VF+ AA G +++LD+GGGF F +SF+E+ ++++ AL +FP G
Sbjct: 260 RDARTVFDKAANEYGLPPLKILDVGGGFQF-----ESFKESTAVLRLALEEFFP----VG 310
Query: 269 SSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNY-WINDGKYGSFDWVNYDEAIAKCT 327
+ +I+EPGR+F +AFTL + +I KR E + NDG YG+ + + +D +
Sbjct: 311 CGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDH--QEPH 368
Query: 328 PLTLASSL---------TTS--KGLSRT-----YNSKVFGPTCDAADEVFSGHKLP-ELE 370
P TL +L TT+ +++T Y ++GPTCD D + + + ++
Sbjct: 369 PRTLYHNLEFHYDDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVI 428
Query: 371 VTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYV 403
V DW F +GAYT + T FNG+ A Y+
Sbjct: 429 VGDWFYFPALGAYTSSAATQFNGFEQTADIVYI 461
>sp|Q54UF3|DCOR_DICDI Probable ornithine decarboxylase OS=Dictyostelium discoideum GN=odc
PE=3 SV=1
Length = 461
Score = 282 bits (721), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 234/401 (58%), Gaps = 43/401 (10%)
Query: 10 VTKEELTEFVRSTILKRQEFDEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPA 69
VT +EL +++L + + D F++ D+GV++ + + + LP + P+YAVKCNP
Sbjct: 69 VTIQELI----TSLLDKTDRD--AFFVADVGVIIKQWQKWVKNLPNVKPYYAVKCNPTVG 122
Query: 70 LLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDS 129
+L L ALG+N+DCASR+EIE+VL LGV P RIIYANPCK +S +K+A V L TFD+
Sbjct: 123 VLRVLDALGTNYDCASRTEIESVLNLGVDPSRIIYANPCKQISALKFARAHNVKLMTFDN 182
Query: 130 VEELHKIRKWHPKCDLLIRIKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVV 189
+ EL KI K+ P+ +L++RI PDDS + SK+GV H + LLE A+ L VV
Sbjct: 183 LSELEKIEKFFPEAELVLRI-APDDSKSVMRFGSKFGV--HIDDCNDLLEMAKEMNLKVV 239
Query: 190 GVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEA 249
GV+FH+GS +Y A+ K+VF+ A +L N ++ ++D+GGG FT S+ + F
Sbjct: 240 GVSFHVGSGCQSGDSYADALIMVKSVFDMAKKL-NMELTLVDVGGG--FTGSDDEKFNAF 296
Query: 250 ASIIKEALHAYF-PNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGK------------- 295
+I+E F PN +++I+EPGR+F + TL +I K
Sbjct: 297 TKVIREKTAELFSPN-------VKIIAEPGRYFAAQSHTLAVTVISKRSIKQEDNRQHPR 349
Query: 296 RVHGEMR--NYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPT 353
R MR NY++ DG YGSF+ +D AK PL L S + +FGPT
Sbjct: 350 RTSNNMRQYNYYLADGVYGSFNNTKFD--YAKVEPLLLKPSTKQPTPCT------LFGPT 401
Query: 354 CDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFNGY 394
CD+ D V ++PEL++ DWL F +MGAYT A ++FNG+
Sbjct: 402 CDSIDVVLKDTQIPELKIGDWLYFQDMGAYTIASSSSFNGF 442
>sp|P78599|DCOR_CANAL Ornithine decarboxylase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SPE1 PE=3 SV=1
Length = 473
Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/408 (39%), Positives = 233/408 (57%), Gaps = 37/408 (9%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
DE F++ DLG ++ NQ LPM+ P+YAVKCN P +L L+ LG NFDCAS++EI
Sbjct: 73 DEDSFFVCDLGEIINSVNQWQQILPMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEI 132
Query: 90 EAVLALGV--SPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLI 147
+ VL+LG+ + +RIIYANPCK S I++AA+ VNLTT D+V EL+K+ K+HP C +LI
Sbjct: 133 DLVLSLGIHQAHERIIYANPCKTNSFIRHAADENVNLTTVDNVHELYKLAKFHPHCKILI 192
Query: 148 RIKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRG 207
R+ DDS A+ L +K+G D + I +L A+ GL V GVAFH+GS A F++
Sbjct: 193 RL-ITDDSTAQCQLSTKFGCDLNTA-IGEILPKAKELGLQVHGVAFHVGSGAKDFSSIYQ 250
Query: 208 AIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLP 267
AI ++ +F+ +G ++LDIGGGF ++F +++ ++K AL +FP E
Sbjct: 251 AIKDSRILFDEMLSMGFTP-KLLDIGGGFE-----RETFPQSSQMVKFALEKFFPIEFSQ 304
Query: 268 GSSLRVISEPGRFFTYSAFTLYTQIIGKR---VHGEMRN--------YWINDGKYGSFDW 316
+ ++ I+EPGRF +AFTL T II +R G N +INDG YG+ +
Sbjct: 305 SNEIKFIAEPGRFMVANAFTLITHIIARRDLPTGGNNNNNDMTPSAMLYINDGVYGNLNC 364
Query: 317 VNYDEAIAKCTPLTLASSLTTSKGLSRT---------------YNSKVFGPTCDAADEVF 361
+ +D K LT + L + + R+ + ++GPTCD D V
Sbjct: 365 ILFDHQTPKVYVLTNENQLFYKQEMMRSLSVNNNNNNNNKTDGFKFSIWGPTCDGLDCVS 424
Query: 362 SGHKLPE-LEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYVVRSNR 408
S KL + ++V DWL F +GAYT T FNG ++ T V SN
Sbjct: 425 SLAKLSKNVQVGDWLFFENVGAYTSCASTKFNGLSSGETKTLYVNSNE 472
>sp|Q9UQW9|DCOR_SCHPO Ornithine decarboxylase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=spe1 PE=2 SV=1
Length = 432
Score = 275 bits (703), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 161/399 (40%), Positives = 234/399 (58%), Gaps = 34/399 (8%)
Query: 12 KEELTEFVRSTILKRQEFDEVPFYILDLGVVVTLYNQMI---SKLPMIHPHYAVKCNPEP 68
K + E R+ + + + D F++ DL V Y Q++ +KLP + P YAVKCNP+P
Sbjct: 48 KNTIEEIERAAV-RGEPADSDAFFVADLNGV---YRQLLRWHAKLPRVQPFYAVKCNPDP 103
Query: 69 ALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFD 128
+L L G+ FDCAS+ E+E +L LGVSPDRI+YANPCK +++++YAA+ G+NL TFD
Sbjct: 104 KVLALLNKFGTGFDCASKGELEQILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFD 163
Query: 129 SVEELHKIRKWHPKCDLLIRIKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSV 188
+ +EL+K+++ HP LL+RI DDS + L K+G + LL+ A++ L+V
Sbjct: 164 NADELYKVKQHHPNSRLLLRIS-TDDSNSLCRLSLKFGA--SLDDTGKLLDIAKSLELNV 220
Query: 189 VGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQE 248
VGV+FH+GS + +A+ AI ++ VF+ G N +LDIGGGF SF
Sbjct: 221 VGVSFHVGSGSYDPSAFLDAIQRSRQVFDQGLERGFN-FDLLDIGGGFM-----NDSFDG 274
Query: 249 AASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRV--HGEMRNYWI 306
A +I+ AL YF S+RVISEPGRFF S+FTL +I KR E Y++
Sbjct: 275 VADLIRSALDTYFD------PSIRVISEPGRFFVSSSFTLAVNVIAKRKLDDEEKVMYYV 328
Query: 307 NDGKYGSFDWVNYDEA-----IAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVF 361
NDG YGS + + +D + KC + + L + G R + ++GPTCD+ D +
Sbjct: 329 NDGVYGSLNCILFDHQHPVARVLKCGSRFVYNDLVGT-GQHRCF---IWGPTCDSLDVIA 384
Query: 362 SGHKLP-ELEVTDWLVFSEMGAYTRARGTNFNGYNTAAI 399
+ LP EL V DW+ F + GAYT A + FNG+ T+ I
Sbjct: 385 NDAHLPYELNVGDWIYFEDAGAYTVAAASCFNGFKTSRI 423
>sp|P14019|DCOR_CRIGR Ornithine decarboxylase OS=Cricetulus griseus GN=ODC1 PE=2 SV=3
Length = 455
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/381 (41%), Positives = 218/381 (57%), Gaps = 27/381 (7%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
D+ FY+ DLG V+ + + + LP + P YAVKCN AL+ LAA+ DCAS++EI
Sbjct: 35 DKDAFYVADLGDVLKKHLRWLKALP-VTPFYAVKCNDSRALVNTLAAI--TVDCASKTEI 91
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
+ V LGV P+R+IYANPCK VS IKYAA+ GV + TFDS EL K+ + HPK L+
Sbjct: 92 QLVQGLGVPPERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKVTKLVLR 151
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS A L K+G + LLE A+ + V+GV+FH+GS T + A+
Sbjct: 152 IATDDSKAVCRLSVKFGATLRTSRL--LLERAKELNIDVIGVSFHVGSGCTDPETFVQAL 209
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
+ A+ VF+ +G + M +LDIGGGF + F+E S+I AL YFP P S
Sbjct: 210 SDARCVFDMGTEVGFS-MYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFP----PDS 264
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRN-----------YWINDGKYGSFDWVN 318
+RVI+EPGR++ SAFTL II K++ + + Y++NDG YGSF+ +
Sbjct: 265 GVRVIAEPGRYYVASAFTLAVNIIAKKIVSKGSDDEDESSEQTFMYYVNDGVYGSFNCIL 324
Query: 319 YDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFS 378
YD A K PL K + Y+S ++GPTCD D + LPE+ V DW++F
Sbjct: 325 YDHAHVK--PLLPKR----PKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFE 378
Query: 379 EMGAYTRARGTNFNGYNTAAI 399
MGAYT A + FNG+ +I
Sbjct: 379 NMGAYTVAAASTFNGFQRPSI 399
>sp|P41931|DCOR_CAEEL Ornithine decarboxylase OS=Caenorhabditis elegans GN=odc-1 PE=3
SV=2
Length = 422
Score = 260 bits (665), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 237/422 (56%), Gaps = 39/422 (9%)
Query: 1 MGGQRVTTVVTKEELTEFVRSTILKR--QEFDEVPFYILDLGVVVTLYNQMISKLPMIHP 58
+G ++ + + + + R + QE D F ++DL ++ + +LPMI P
Sbjct: 8 IGDNKIGVLPKQVDQLQMCRDIAASKDLQENDS-SFMLVDLDKIIERFQLWKRELPMIEP 66
Query: 59 HYAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAA 118
YAVKCN + L+ LA+LG FDCAS+ EI+ V+ GVS +RIIYANPCK S I +A
Sbjct: 67 FYAVKCNTDLVLIRILASLGCGFDCASKDEIDIVMGTGVSAERIIYANPCKTRSFIAHAM 126
Query: 119 NVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPPDDSGAKHPLDSKYGVDHHPQEIVP-L 177
+ V + TFD+ EEL KI K HP ++++RI D + A PL+ K+G D P P L
Sbjct: 127 DRDVKMMTFDNPEELLKIAKLHPNAEMILRIAVSDPT-ATCPLNLKFGAD--PIIAAPQL 183
Query: 178 LEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFS 237
L+ A G++VVG++FH+GS +AYR A+ AK + E LG KM ++D+GGGF
Sbjct: 184 LKTASEEGINVVGISFHVGSGCNDASAYRNALQHAKNLCEIGEGLG-FKMDIIDMGGGFP 242
Query: 238 FTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQII---- 293
+ F++ A I++AL +FP+ ++ R+I+EPGRFF F+L II
Sbjct: 243 GAEHHN-PFEKIAETIRDALDEFFPD-----TNKRLIAEPGRFFAAGPFSLVANIIHATE 296
Query: 294 --GKRV---------HGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTTSKGLS 342
++ HG M Y+INDG YGSF+ + +D A +PL T + +
Sbjct: 297 VPASKITKDPKDCADHGYM--YYINDGVYGSFNCILFDHAHPIGSPL-----FDTDR--N 347
Query: 343 RTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTY 402
+ S ++GPTCD+ D V +P++ V +WL + +MGAYT A T FNG+ + +P Y
Sbjct: 348 EKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFNGF-SKPVPMY 406
Query: 403 VV 404
V+
Sbjct: 407 VM 408
>sp|P27121|DCOR_NEUCR Ornithine decarboxylase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=spe-1
PE=2 SV=1
Length = 484
Score = 252 bits (644), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 221/404 (54%), Gaps = 42/404 (10%)
Query: 30 DEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEI 89
DE F++ DLG V + + LP + P YAVKC+P+ LL+ LAALG+ FDCAS++EI
Sbjct: 81 DEDTFFVADLGEVYRQHLRWKLNLPRVKPFYAVKCHPDERLLQLLAALGTGFDCASKAEI 140
Query: 90 EAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRI 149
E VL +GV P RIIYA PCK S+++Y A GV TFD+ +EL KI + +P +L +RI
Sbjct: 141 EQVLRMGVDPSRIIYAQPCKTNSYLRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRI 200
Query: 150 KPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAI 209
DDS + K+G + LL A GL+VVGV+FH+GS A+ A+ A+
Sbjct: 201 L-TDDSSSLCRFSMKFGASLDSTD--GLLGLARQLGLNVVGVSFHVGSGASDPTAFLKAV 257
Query: 210 AAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGS 269
A VF+ AA G + ++ LD+GGGF + SF++ A++++ AL YFP +
Sbjct: 258 QDAHVVFQQAAAYGYS-LKTLDVGGGF----CSDDSFEQMANVLRAALDEYFPAH----T 308
Query: 270 SLRVISEPGRFFTYSAFTLYTQIIGKRV----------------------HGEMRNY-WI 306
+ +I+EPGR++ SAFTL II +R +G+ R ++
Sbjct: 309 GVNLIAEPGRYYASSAFTLACNIIARRTIQDGSAVSVSDSSSMSDDGSVNNGDARYMVYV 368
Query: 307 NDGKYGSFDWVNYDEA-----IAKCTPLTLASSLTTSKGLSR-TYNSKVFGPTCDAADEV 360
NDG YG+F + +D I + T+ +S+ + + ++GPTCD D +
Sbjct: 369 NDGLYGNFSSIMFDHQHPVAKILRAGGRTMYNSVAAHESSAEDAIEYSIWGPTCDGIDRI 428
Query: 361 FSGHKLPE-LEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYV 403
+ E L+V DWL F +MGAYT+ T FNG++ YV
Sbjct: 429 TESIRFREILDVGDWLYFEDMGAYTKCSATTFNGFSNEHDVIYV 472
>sp|Q96A70|ADC_HUMAN Arginine decarboxylase OS=Homo sapiens GN=ADC PE=2 SV=1
Length = 460
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/390 (39%), Positives = 211/390 (54%), Gaps = 30/390 (7%)
Query: 30 DEVP-FYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSE 88
DEV F++ DLG +V + + LP + P YAVKCN P +L+ LA LG F CA+++E
Sbjct: 36 DEVAAFFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAE 95
Query: 89 IEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIR 148
+E V +G+ +II ANPCK ++ IKYAA G+ L +FD+ EL K+ K HP +++
Sbjct: 96 MELVQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLC 155
Query: 149 IKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGA 208
I DDS + L K+GV + LLE A+ + VVGV+FHIGS AY +
Sbjct: 156 IA-TDDSHSLSCLSLKFGVSL--KSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQS 212
Query: 209 IAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPG 268
IA A+ VFE LG +KM VLD+GGGF T F+E AS+I AL YFP G
Sbjct: 213 IADARLVFEMGTELG-HKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPE----G 267
Query: 269 SSLRVISEPGRFFTYSAFTLYTQIIGKRV------HGEMRN--------YWINDGKYGSF 314
+ + +E GR++ SAFT+ II K+ E N Y +++G YG F
Sbjct: 268 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 327
Query: 315 DWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDW 374
+ V +D C L +T + L Y+S ++GP D D V G LP+L V DW
Sbjct: 328 NSVLFDNI---CPTPILQKKPSTEQPL---YSSSLWGPAVDGCDCVAEGLWLPQLHVGDW 381
Query: 375 LVFSEMGAYTRARGTNFNGYNTAAIPTYVV 404
LVF MGAYT G+ F G I TY +
Sbjct: 382 LVFDNMGAYTVGMGSPFWGTQACHI-TYAM 410
>sp|O35484|AZIN1_MOUSE Antizyme inhibitor 1 OS=Mus musculus GN=Azin1 PE=1 SV=1
Length = 448
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 208/388 (53%), Gaps = 46/388 (11%)
Query: 34 FYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAVL 93
F++ DLG +V ++Q + + I P Y VKCN PA+LE LAALG+ F C+S++E+ V
Sbjct: 40 FFVGDLGKIVKKHSQWQTVVAQIKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMALVQ 99
Query: 94 ALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPPD 153
LGVSP+ II+ +PCK VS IKYAA VGVN+ T D+ EL KI + HP +L+ I D
Sbjct: 100 ELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATED 159
Query: 154 DSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAK 213
+ G + + K+G + LLE A+ + ++GV FH+ SA ++ Y A++ A+
Sbjct: 160 NIGGEDG-NMKFGTT--LKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDAR 216
Query: 214 AVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRV 273
VF+ A G M +LDIGGGF+ T +E +I L YFP GS +++
Sbjct: 217 CVFDMAGEFGFT-MNMLDIGGGFTGTEI---QLEEVNHVISPLLDIYFPE----GSGIQI 268
Query: 274 ISEPGRFFTYSAFTLYTQIIGKRV-------HGEMRN--------YWINDGKYGSFDWVN 318
ISEPG ++ SAFTL II K+V G +N Y++NDG YGSF
Sbjct: 269 ISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSF---- 324
Query: 319 YDEAIAKCTPLTLASSLTTSKGLSRTYN-------SKVFGPTCDAADEVFSGHKLPELEV 371
L+ L T + + Y S ++GP+CD D++ LPEL V
Sbjct: 325 ---------ASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNV 375
Query: 372 TDWLVFSEMGAYTRARGTNFNGYNTAAI 399
DWL+F MGA + + FN + AI
Sbjct: 376 GDWLIFDNMGADSFHEPSAFNDFQRPAI 403
>sp|P49725|DCOR_PANRE Ornithine decarboxylase OS=Panagrellus redivivus GN=ODC PE=2 SV=1
Length = 435
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 205/377 (54%), Gaps = 27/377 (7%)
Query: 33 PFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAV 92
PF ++++ ++ Q +P + P YAVKCN + LL LA LG FDCAS++EIE V
Sbjct: 46 PFVVMNVSTIMAKVIQWQRTMPRVAPCYAVKCNDDKVLLRTLADLGMGFDCASKAEIEKV 105
Query: 93 LALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPP 152
+ L V P++I+YANPCK I +A GV TFDSVEEL KI++ H L++RI
Sbjct: 106 IGL-VGPEKIVYANPCKTRGFIAHAEAAGVKRMTFDSVEELTKIKQNHADPSLILRISVS 164
Query: 153 DDSGAKHPLDSKYGVDHHPQEIVP-LLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAA 211
D + A+ L K+G D P+ + P LL A G++V+G++FH+GS + A +R A+
Sbjct: 165 DPT-AQCQLGIKFGCD--PETVAPKLLRKAADMGMNVIGISFHVGSGCNEPATFRTALEY 221
Query: 212 AKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSL 271
A+ +F+ LG + M +LDIGGGF ++ S A++I AL FP + P +
Sbjct: 222 ARGLFDLGISLGLS-MTLLDIGGGFPGVDTAHISLDACAAVINPALEELFPLDSCP--DV 278
Query: 272 RVISEPGRFFTYSAFTLYTQII-------------GKRVHGEMRNYWINDGKYGSFDWVN 318
VI+EPGR+F +A ++ T +I V+ + Y++NDG YGSF+
Sbjct: 279 EVIAEPGRYFACAAVSVTTNVIASVKVPASRITEKADDVNRDGYMYYMNDGVYGSFNCKL 338
Query: 319 YDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFS 378
+D + P L + V+GPTCD D+V +P L DWL +
Sbjct: 339 FDHYQPRGMP------LAEHDADEPRFPVCVWGPTCDGLDQVEESSVMPRLYEGDWLYYP 392
Query: 379 EMGAYTRARGTNFNGYN 395
+MGAYT + FNG++
Sbjct: 393 DMGAYTSVAASTFNGFD 409
>sp|Q63764|AZIN1_RAT Antizyme inhibitor 1 OS=Rattus norvegicus GN=Azin1 PE=1 SV=1
Length = 448
Score = 236 bits (601), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 200/371 (53%), Gaps = 46/371 (12%)
Query: 34 FYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAVL 93
F++ DLG +V ++Q + + I P Y VKCN PA+LE LAALG+ F C++++E+ V
Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKPFYMVKCNSTPAVLEILAALGTGFACSTKNEMALVQ 99
Query: 94 ALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPPD 153
LGVSP+ IIY +PCK S IKYAA VGVN+ T D+ EL KI + HP +L+ I D
Sbjct: 100 ELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIATED 159
Query: 154 DSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAK 213
+ G + + K+G + LLE A+ + ++GV FHI SA ++ Y A++ A+
Sbjct: 160 NIGGEDG-NMKFGTT--LKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALSDAR 216
Query: 214 AVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRV 273
VF+ A G M +LDIGGGF+ T +E +I L YFP GS +++
Sbjct: 217 CVFDMAGEFGFT-MNMLDIGGGFTGTEI---QLEEVNHVISPLLDIYFPE----GSGIQI 268
Query: 274 ISEPGRFFTYSAFTLYTQIIGKRV-------HGEMRN--------YWINDGKYGSFDWVN 318
ISEPG ++ SAFTL II K+V G +N Y++NDG YGSF
Sbjct: 269 ISEPGSYYVSSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSF---- 324
Query: 319 YDEAIAKCTPLTLASSLTTSKGLSRTYN-------SKVFGPTCDAADEVFSGHKLPELEV 371
L+ L T + + Y S ++GP+CD D++ LPEL V
Sbjct: 325 ---------ASKLSEDLNTVPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSV 375
Query: 372 TDWLVFSEMGA 382
DWL+F MGA
Sbjct: 376 GDWLIFDNMGA 386
>sp|Q5R7K3|AZIN1_PONAB Antizyme inhibitor 1 OS=Pongo abelii GN=AZIN1 PE=2 SV=1
Length = 448
Score = 236 bits (601), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 205/388 (52%), Gaps = 46/388 (11%)
Query: 34 FYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAVL 93
F++ DLG +V ++Q + + I P Y VKCN PA+LE LAALG+ F C+S++E+ V
Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMALVQ 99
Query: 94 ALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPPD 153
LGV P+ IIY +PCK VS IKYAA VGVN+ T D+ EL KI + HP +L+ I D
Sbjct: 100 ELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATED 159
Query: 154 DSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAK 213
+ G + + K+G + LLE A+ + ++GV FH+ SA + Y A++ A+
Sbjct: 160 NIGGEEG-NMKFGTTL--KNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDAR 216
Query: 214 AVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRV 273
VF+ A +G M +LDIGGGF+ T +E +I L YFP GS +++
Sbjct: 217 CVFDMAGEIGFT-MNMLDIGGGFTGTEF---QLEEVNHVISPLLDVYFPE----GSGVKI 268
Query: 274 ISEPGRFFTYSAFTLYTQIIGKRVHGEMR---------------NYWINDGKYGSFDWVN 318
ISEPG ++ SAFTL II K+V + Y++NDG YGSF
Sbjct: 269 ISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSF---- 324
Query: 319 YDEAIAKCTPLTLASSLTTSKGLSRTYN-------SKVFGPTCDAADEVFSGHKLPELEV 371
L+ L T + + Y S ++GP+CD D++ LPEL V
Sbjct: 325 ---------ASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNV 375
Query: 372 TDWLVFSEMGAYTRARGTNFNGYNTAAI 399
DWL+F MGA + + FN + AI
Sbjct: 376 GDWLIFDNMGADSFHEPSAFNDFQRPAI 403
>sp|O14977|AZIN1_HUMAN Antizyme inhibitor 1 OS=Homo sapiens GN=AZIN1 PE=1 SV=2
Length = 448
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 205/388 (52%), Gaps = 46/388 (11%)
Query: 34 FYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAVL 93
F++ DLG +V ++Q + + I P Y VKCN PA+LE LAALG+ F C+S++E+ V
Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMALVQ 99
Query: 94 ALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPPD 153
LGV P+ IIY +PCK VS IKYAA VGVN+ T D+ EL KI + HP +L+ I D
Sbjct: 100 ELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIATED 159
Query: 154 DSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAK 213
+ G + + K+G + LLE A+ + ++GV FH+ SA + Y A++ A+
Sbjct: 160 NIGGEEG-NMKFGTTL--KNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDAR 216
Query: 214 AVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRV 273
VF+ A +G M +LDIGGGF+ T +E +I L YFP GS +++
Sbjct: 217 CVFDMAGEIGFT-MNMLDIGGGFTGTEF---QLEEVNHVISPLLDIYFPE----GSGVKI 268
Query: 274 ISEPGRFFTYSAFTLYTQIIGKRVHGEMR---------------NYWINDGKYGSFDWVN 318
ISEPG ++ SAFTL II K+V + Y++NDG YGSF
Sbjct: 269 ISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSF---- 324
Query: 319 YDEAIAKCTPLTLASSLTTSKGLSRTYN-------SKVFGPTCDAADEVFSGHKLPELEV 371
L+ L T + + Y S ++GP+CD D++ LPEL V
Sbjct: 325 ---------ASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNV 375
Query: 372 TDWLVFSEMGAYTRARGTNFNGYNTAAI 399
DWL+F MGA + + FN + AI
Sbjct: 376 GDWLIFDNMGADSFHEPSAFNDFQRPAI 403
>sp|P40807|DCOR1_DROME Ornithine decarboxylase 1 OS=Drosophila melanogaster GN=Odc1 PE=1
SV=3
Length = 394
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 208/378 (55%), Gaps = 31/378 (8%)
Query: 27 QEFDEVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASR 86
Q D+ I DL V LP I P YAVKCN +P ++ LA LG+ FDCAS+
Sbjct: 27 QRLDQA-LNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLAQLGAGFDCASK 85
Query: 87 SEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLL 146
+E++ VL VSP+RII+ANPC+PVSH++YA V+ T D+ E++K+ +P +L+
Sbjct: 86 NEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLI 145
Query: 147 IRIKPPDDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYR 206
+R K + A+ PL K+G D + L+ A++ L V G +FH+GS ++ AY
Sbjct: 146 VRFK-SEAKEAQCPLGDKFGCDAD-VDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYD 203
Query: 207 GAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELL 266
AI AK +F+ A LG + M LDIGGGF S+ F++ A + ++ +FP+E
Sbjct: 204 RAIKKAKNLFKFGALLGYD-MDFLDIGGGFP--GSDDVKFEKIAESVNTSVQRHFPDE-- 258
Query: 267 PGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRN---------YWINDGKYGSFDWV 317
+ +I+EPGRFF +A TL +I KR E+RN Y++NDG YGSF+ +
Sbjct: 259 ---RVHIIAEPGRFFVAAACTLVCKIHAKR---EIRNEAGKLDTVMYYLNDGVYGSFNCI 312
Query: 318 NYDEAIAKCTP-LTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLV 376
YD + L A SL K L ++GP+CDA D++ LP L D L
Sbjct: 313 LYDHQVVIAEHYLDNAESLPHLKSL-------IWGPSCDALDKISEDLHLPNLNRGDLLG 365
Query: 377 FSEMGAYTRARGTNFNGY 394
F MGAYT + FNG+
Sbjct: 366 FRNMGAYTMPIASAFNGF 383
>sp|P27116|DCOR_LEIDO Ornithine decarboxylase OS=Leishmania donovani PE=3 SV=1
Length = 707
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 214/431 (49%), Gaps = 75/431 (17%)
Query: 31 EVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIE 90
E PFYI+DLG VV + +LPM+ P++AVK NP+PA+LE L+ALG+ FDCAS+ EI
Sbjct: 256 EDPFYIIDLGRVVEQMARWRHELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315
Query: 91 AVLA--LGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIR 148
VL L SPD II+ANPCK + ++ A GV T D+ E+ KI + P +IR
Sbjct: 316 MVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375
Query: 149 IKPPDDSGAKHPLDSKYGVDHHPQEIVP-LLEAAEASGLSVVGVAFHIGSAATKFAAYRG 207
IK +DS A+ +K+G P E V LLEAA ++V GV+FH+GS +AY
Sbjct: 376 IK-TNDSKAQCSFSTKFGA---PLEDVEGLLEAARQFNVTVCGVSFHVGSGNDDQSAYVS 431
Query: 208 AIAAAKAVFETAARLGNNKMRVLDIGGGFSFTN----SNTKSFQEAASIIKEALHAYFPN 263
A+ A VF+ A + G K +LDIGGGF T S SF+ A I+ L
Sbjct: 432 AVRDAYQVFQQAVQYG-FKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVL-----A 485
Query: 264 ELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRV--------------------HGEMRN 303
EL G + +ISEPGR+FT ++ L + R E
Sbjct: 486 ELFGGGDVTIISEPGRYFTAASHALLMNVFASRTLRLSDVEVSRQAFQSVVSMDEPEEYQ 545
Query: 304 YWINDGKYGSFDWVNYD----------------------EAIAKCT----------PLTL 331
Y++NDG Y SF+ + +D EA A C+ PL
Sbjct: 546 YYVNDGLYHSFNCILFDHAHPTLLLLNDGDGADGVESGTEAAAVCSEEEGETSLSGPLAN 605
Query: 332 ASSLTTSKGLSRTYNSK------VFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTR 385
++ R++ + +FGPTCD+ D + PE+++ DWL+ +MG+YT
Sbjct: 606 DPLFMSAWDRRRSFARRPLRITTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTT 665
Query: 386 ARGTNFNGYNT 396
A FNG+ T
Sbjct: 666 AAAGFFNGFAT 676
>sp|Q8BVM4|ADC_MOUSE Antizyme inhibitor 2 OS=Mus musculus GN=Adc PE=2 SV=1
Length = 459
Score = 228 bits (580), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 196/364 (53%), Gaps = 27/364 (7%)
Query: 34 FYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAVL 93
F++ DLG VV + + LP + P YAV CN +L+ LA LG F CA+++E+E V
Sbjct: 41 FFVADLGAVVRKHFCFLKHLPRVRPFYAVGCNSSLGVLKVLAELGLGFSCANKAEMELVQ 100
Query: 94 ALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPPD 153
+GV +II ANPCK V+ IKYAA GV L +FD+ EL K+ K HP +++ I D
Sbjct: 101 HIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATQD 160
Query: 154 DSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAK 213
H L ++G + LLE A+ S + VVGV+FHIGS AY +IA A+
Sbjct: 161 SHSLNH-LSLRFGASL--KSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADAR 217
Query: 214 AVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRV 273
VF+ LG+ M +LD+GGGF F+E AS+I AL YFP G + +
Sbjct: 218 LVFQMGEELGHT-MNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPE----GCGVDI 272
Query: 274 ISEPGRFFTYSAFTLYTQIIGKRVHGEMRN-------------YWINDGKYGSFDWVNYD 320
++E GR++ SAFT+ I+ KR + + Y++++G YG F+ V +D
Sbjct: 273 LAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEGVYGVFNSVLFD 332
Query: 321 EAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEM 380
C L + + L Y+S ++GP + D V G LP+L+V DWLVF M
Sbjct: 333 NT---CPTPALQKKPSADQPL---YSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNM 386
Query: 381 GAYT 384
GAYT
Sbjct: 387 GAYT 390
>sp|P40808|DCOR2_DROME Ornithine decarboxylase 2 OS=Drosophila melanogaster GN=Odc2 PE=1
SV=2
Length = 393
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 208/354 (58%), Gaps = 31/354 (8%)
Query: 53 LPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVS 112
+P I PHYAVKCN +P +++ LA LG+ FDCAS++E++ VL LGVSP+RII+A+PC+P S
Sbjct: 52 MPRIEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKLVLGLGVSPERIIFAHPCRPAS 111
Query: 113 HIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPPDDSGAKHPLDSKYGVDHHPQ 172
H++YA V T D+ E++K+RK +P +L++R K + A PL KYG D
Sbjct: 112 HLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSNLIVRFK-SEAKKALCPLGDKYGCDAE-A 169
Query: 173 EIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDI 232
+ L+ A+A GL V G +FH+GS ++ AY AI A+ +F+ +G +KM +LD+
Sbjct: 170 DAAALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAENIFKVGEMIG-HKMELLDV 228
Query: 233 GGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQI 292
GGGF + + F+E A + ++ FP++ +R+ISEPGRFF +A+TL ++
Sbjct: 229 GGGFP--GIDDEMFEEIAQSVNTSVELRFPDK-----RIRIISEPGRFFVEAAYTLICKV 281
Query: 293 IGKRVHGEMRN---------YWINDGKYGSF-DWVNYDEAIAKCTPLTLASSLTTSKGLS 342
KR E+R+ Y++NDG +G+F Y E +A L A SL K
Sbjct: 282 HAKR---EVRSKDGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDEAESLPKLK--- 335
Query: 343 RTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFNGYNT 396
S ++GP+CDA D++ S LP L D L F MGAYT + FNG++
Sbjct: 336 ----SVIWGPSCDAMDKI-SDLLLPNLNPGDLLGFRNMGAYTMPIASPFNGFDV 384
>sp|O50657|DCLO_SELRU Lysine/ornithine decarboxylase OS=Selenomonas ruminantium GN=ldc
PE=1 SV=1
Length = 393
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 195/371 (52%), Gaps = 21/371 (5%)
Query: 33 PFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAV 92
PF + L V Y M LP YA+K NP P +L LA LGS+FD AS E+E +
Sbjct: 21 PFLVASLDKVEENYQFMRRHLPRAGVFYAMKANPTPEILSLLAGLGSHFDVASAGEMEIL 80
Query: 93 LALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPP 152
LGV ++IYANP K +K AA+ V TFD E+ K+ K P D+L+RI
Sbjct: 81 HELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLVRIAVR 140
Query: 153 DDSGAKHPLDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAA 212
++ A L++K+G +E + LL+AA+ +GL +G+ FH+GS + AAY A+ A
Sbjct: 141 NNK-ALVDLNTKFGA--PVEEALDLLKAAQDAGLHAMGICFHVGSQSLSTAAYEEALLVA 197
Query: 213 KAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLR 272
+ +F+ A +G + + LDIGGGF ++ + AA + EA++ + L P ++
Sbjct: 198 RRLFDEAEEMGMH-LTDLDIGGGFPVPDAKGLNVDLAA--MMEAINKQI-DRLFPDTA-- 251
Query: 273 VISEPGRFFTYSAFTLYTQIIGKRVHGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLA 332
V +EPGR+ +A L T +IG + GE Y +++G YG F + YD PL
Sbjct: 252 VWTEPGRYMCGTAVNLVTSVIGTKTRGEQPWYILDEGIYGCFSGIMYDHW---TYPLHCF 308
Query: 333 SSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
G S GP+CD D ++ PEL++ D ++ +EMG+YT T FN
Sbjct: 309 -------GKGNKKPSTFGGPSCDGIDVLYRDFMAPELKIGDKVLVTEMGSYTSVSATRFN 361
Query: 393 GYNTAAIPTYV 403
G+ A PT +
Sbjct: 362 GFYLA--PTII 370
>sp|Q9ZME5|DCDA_HELPJ Diaminopimelate decarboxylase OS=Helicobacter pylori (strain J99)
GN=lysA PE=3 SV=1
Length = 405
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 147/348 (42%), Gaps = 38/348 (10%)
Query: 60 YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAAN 119
YA+K N ++L LA LGS DC S EI+ L G+ P +I+++ K I+ A
Sbjct: 43 YALKANSNLSILSLLANLGSGADCVSIGEIQRALKAGIKPYKIVFSGVGKSAFEIEQALK 102
Query: 120 VGVNLTTFDSVEELHKI----RKWHPKCDLLIRIKPPDDSGAKHPL------DSKYGVDH 169
+ + +S EL I + K + IRI P D+ HP ++K+GV+
Sbjct: 103 LNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKT-HPYISTGLKENKFGVEE 161
Query: 170 HPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRV 229
+ + L A +++ L V V FHIGS A + ++ LG + +R
Sbjct: 162 K-EALEMFLWAKKSAFLEPVSVHFHIGSQLLDLDPITEASQKVAKIAKSLIALGID-LRF 219
Query: 230 LDIGGGF--SFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFT 287
D+GGG S+ N T + A I +L G L +I EPGR +
Sbjct: 220 FDVGGGIGVSYENEETIKLYDYAQGILNSLQ---------GLDLTIICEPGRSIVAESGE 270
Query: 288 LYTQIIGKRVHGEMRNYWINDGKYGSF---DWVNYDEAIAKCTPLTLASSLTTSKGLSRT 344
L TQ++ ++ + + + I D F + AI TP G
Sbjct: 271 LITQVLYEK-KAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVITPC----------GGREI 319
Query: 345 YNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
V GP C+++D LPELE D L ++GAY + + +N
Sbjct: 320 SPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYN 367
>sp|O05321|DCDA_PSEFL Diaminopimelate decarboxylase OS=Pseudomonas fluorescens GN=lysA
PE=3 SV=1
Length = 416
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 157/351 (44%), Gaps = 38/351 (10%)
Query: 58 PH---YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHI 114
PH +AVK N +L LA LG+ FD S E+E VLA G S D+I+++ K +
Sbjct: 52 PHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGSADKIVFSGVGKTREDM 111
Query: 115 KYAANVGVNLTTFDSVEELHK-----IRKWHPKCDLLIRIKPPDDSGAKHPL------DS 163
+ A VGV+ +S +EL + + + +R+ P D+G HP ++
Sbjct: 112 RRALEVGVHCFNIESTDELGSRLQIVAAELGVRAPISLRVNPDVDAG-THPYISTGLKEN 170
Query: 164 KYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLG 223
K+G+ E V + AA+ L V+GV HIGS T + I A + RLG
Sbjct: 171 KFGIAIADAEDV-YVRAAQLPNLEVLGVDCHIGSQLTTLEPF---IDALDRLLALVDRLG 226
Query: 224 NNK--MRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFF 281
+ +R +D+GGG + E ++ + + A E L G L ++ EPGR+
Sbjct: 227 DCGIYLRHIDLGGGV-----GVRYRDEEPPLVADYIKAV--RERLDGRDLALMFEPGRYI 279
Query: 282 TYSAFTLYTQIIGKRVHGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTTSKGL 341
+A L TQ+ + H E +++ I D +A T ++
Sbjct: 280 VANAGVLLTQVEYLK-HTEHKDFAIVDAAMNDLIRPALYQAWMDVT------AVRPRDTA 332
Query: 342 SRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
+R+Y+ + GP C+ D + G +L LE D L GAY +N+N
Sbjct: 333 ARSYD--IVGPICETGDFLAKGRELA-LEEGDLLAVHSAGAYGFVMSSNYN 380
>sp|B4XMC6|DCDA_HELPX Diaminopimelate decarboxylase OS=Helicobacter pylori GN=lysA PE=1
SV=1
Length = 405
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 147/348 (42%), Gaps = 38/348 (10%)
Query: 60 YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAAN 119
YA+K N ++L LA L S DC S EI+ L G+ P RI+++ K I+ A
Sbjct: 43 YALKANSNLSILSLLAHLESGADCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALK 102
Query: 120 VGVNLTTFDSVEELHKI----RKWHPKCDLLIRIKPPDDSGAKHPL------DSKYGVDH 169
+ + +S EL I + K + IRI P D+ HP ++K+GV
Sbjct: 103 LNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKT-HPYISTGLKENKFGVGE 161
Query: 170 HPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRV 229
+ + L A +++ L V V FHIGS A + ++ LG + +R
Sbjct: 162 K-EALEMFLWAKKSAFLEPVSVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGID-LRF 219
Query: 230 LDIGGGF--SFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFT 287
D+GGG S+ N T + A I AL G L +I EPGR +
Sbjct: 220 FDVGGGIGVSYENEETIKLYDYAQGILNALQ---------GLDLTIICEPGRSIVAESGE 270
Query: 288 LYTQIIGKRVHGEMRNYWINDGKYGSF---DWVNYDEAIAKCTPLTLASSLTTSKGLSRT 344
L TQ++ ++ + + + I D F + AI TP SKG
Sbjct: 271 LITQVLYEK-KAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVITP---------SKG-REI 319
Query: 345 YNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
V GP C+++D LPELE D + ++GAY + + +N
Sbjct: 320 SPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYN 367
>sp|P56129|DCDA_HELPY Diaminopimelate decarboxylase OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=lysA PE=3 SV=1
Length = 405
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 148/348 (42%), Gaps = 38/348 (10%)
Query: 60 YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAAN 119
YA+K N ++L LA L S DC S EI L G+ P RI+++ K I+ A
Sbjct: 43 YALKANSNLSILSLLAHLESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALK 102
Query: 120 VGVNLTTFDSVEELHKI----RKWHPKCDLLIRIKPPDDSGAKHPL------DSKYGVDH 169
+ + +S EL I + K + IRI P D+ HP ++K+GV
Sbjct: 103 LNILFLNVESFMELTTIETIAQSLGIKARISIRINPNIDAKT-HPYISTGLKENKFGVGE 161
Query: 170 HPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRV 229
+ + L A +++ L V V FHIGS + A + ++ LG + +R
Sbjct: 162 K-EALEMFLWAKKSAFLEPVSVHFHIGSQLSDLEPIIEASQKVAKIAKSLIALGID-LRF 219
Query: 230 LDIGGGF--SFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFT 287
D+GGG S+ N T + A I +L G L +I EPGR +
Sbjct: 220 FDVGGGIGVSYENEETIKLYDYAQGILNSLQ---------GLDLTIICEPGRSIVAESGE 270
Query: 288 LYTQIIGKRVHGEMRNYWINDGKYGSF---DWVNYDEAIAKCTPLTLASSLTTSKGLSRT 344
L TQ++ ++ + + + + D F + AI TP SKG
Sbjct: 271 LITQVLYEK-KAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVITP---------SKG-REI 319
Query: 345 YNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
V GP C+++D LPELE D LV ++GAY + + +N
Sbjct: 320 SPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGSSMASQYN 367
>sp|P19572|DCDA_PSEAE Diaminopimelate decarboxylase OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=lysA
PE=3 SV=2
Length = 415
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 153/363 (42%), Gaps = 51/363 (14%)
Query: 58 PH---YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHI 114
PH +AVK N +L LA LG+ FD SR E+E VLA G P +++++ K +
Sbjct: 52 PHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDM 111
Query: 115 KYAANVGVNLTTFDSVEELHKIRK----WHPKCDLLIRIKPPDDSGAKHPL------DSK 164
+ A VGV+ +S EEL ++++ K + +R+ P D+ HP ++K
Sbjct: 112 RRALEVGVHCFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDA-QTHPYISTGLKENK 170
Query: 165 YGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGN 224
+G+ E V AAE L V+GV HIGS T+ + A+ + + A G
Sbjct: 171 FGIAIDEAEAV-YARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGI 229
Query: 225 NKMRVLDIGGGFS--FTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFT 282
+R LD+GGG + + + I+E LH G L ++ EPGR
Sbjct: 230 G-IRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLH---------GRDLTLVFEPGRSIV 279
Query: 283 YSAFTLYTQIIGKRVHGEMRNYWINDGKYGSF-------DWVNYDEAIAKCTPLTLASSL 335
+A L T++ + H E +++ I D W++ ++
Sbjct: 280 ANAGVLLTRVEYLK-HTEHKDFAIVDAAMNDLIRPALYQAWMD-------------VQAV 325
Query: 336 TTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFNGYN 395
R Y+ + GP C+ D + L L D L GAY +N+N
Sbjct: 326 RPRDAAPRRYD--LVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRG 382
Query: 396 TAA 398
AA
Sbjct: 383 RAA 385
>sp|Q9KVL7|DCDA_VIBCH Diaminopimelate decarboxylase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=lysA PE=1
SV=1
Length = 417
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 149/351 (42%), Gaps = 36/351 (10%)
Query: 57 HPH---YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSH 113
+PH YAVK N +L LA LGS FD S E+E VLA G P +++++ K +
Sbjct: 52 YPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAE 111
Query: 114 IKYAANVGVNLTTFDSVEELHKIRK----WHPKCDLLIRIKPPDDSGAKHPL------DS 163
+K A + + +S EL ++ K K + +RI PD HP D+
Sbjct: 112 MKRALQLKIKCFNVESEPELQRLNKVAGELGVKAPISLRIN-PDVDAKTHPYISTGLRDN 170
Query: 164 KYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLG 223
K+G+ V L A L V G+ HIGS T A + A A+ ++ G
Sbjct: 171 KFGITFDRAAQVYRL-AHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEG 229
Query: 224 NNKMRVLDIGGGFSFTNSNTKSFQ--EAASIIKEALHAYFPNELLPGSSLRVISEPGRFF 281
+ +R LD+GGG + Q E A + + L + L +I EPGR
Sbjct: 230 IH-IRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLERH--------RDLELIFEPGRAI 280
Query: 282 TYSAFTLYTQIIGKRVHGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTTSKGL 341
+A L T++ + H E +N+ I D +A P L +G
Sbjct: 281 AANAGVLVTKVEFLK-HTEHKNFAIIDAAMNDLIRPALYQAWQDIIP------LRPRQGE 333
Query: 342 SRTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
++TY+ + GP C+ +D + L L+ D L GAY +N+N
Sbjct: 334 AQTYD--LVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYN 381
>sp|Q9Z661|DCDA_ZYMMO Diaminopimelate decarboxylase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=lysA PE=3 SV=1
Length = 421
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 145/351 (41%), Gaps = 44/351 (12%)
Query: 60 YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAAN 119
+AVK NP A+L + A G D S EI + G+ P+RI+++ K ++YA
Sbjct: 60 FAVKANPSQAILASFAKEGLGADVVSAGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALE 119
Query: 120 VGVNLTTFDSVEELHKIRK----WHPKCDLLIRIKPPDDSG-----AKHPLDSKYGVDHH 170
+G+ +SV E+ + + K + +RI P D A D+K+G+
Sbjct: 120 IGIGQFNIESVSEIEMLAEVATSLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAE 179
Query: 171 PQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFE--TAARLGNNKMR 228
+ + A L + G+A HIGS T A + AAA+ ++E TA + +
Sbjct: 180 -DALSAYEKLASYPSLKIQGIASHIGSQITDLAPFE---AAAERIYEIITALEKAGHAIE 235
Query: 229 VLDIGGGFSFTNSNTK----SFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYS 284
D+GGG + + S + +IK + G + R+I EPGR +
Sbjct: 236 TADLGGGLGVRYKDDQPEPPSVEAYGEMIK---------RVTKGWNCRLIFEPGRSLIAN 286
Query: 285 AFTLYTQIIGKRVHGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTTSKGLS-- 342
A L +++I I + K F V D A+ TL + K ++
Sbjct: 287 AGVLLSKVI-----------RIKESKTARF--VILDAAMNDLVRPTLYDAYHEIKAVTPS 333
Query: 343 -RTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
+TY + + GP C+ D + ++ D + GAY + +N
Sbjct: 334 AQTYQADIVGPVCETGDIFARNRSISAVKADDLMAIMSAGAYGATMASAYN 384
>sp|Q9JXM2|DCDA_NEIMB Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=lysA PE=3 SV=1
Length = 414
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 165/386 (42%), Gaps = 48/386 (12%)
Query: 33 PFYILDLGVVVTLYNQMISKLPMIHP--HYAVKCNPEPALLEALAALGSNFDCASRSEIE 90
P Y+ + + + ++P YAVK N ++++ A+LGS FD S E+
Sbjct: 20 PLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELA 79
Query: 91 AVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPKCD----LL 146
VLA G + I++ K + I++A N GV +S+ E+ +I+K + +
Sbjct: 80 RVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVS 139
Query: 147 IRIKPPDDSGAKHPLDS------KYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAAT 200
+RI P D+ HP S K+G+ + + AA+ L ++G+ HIGS T
Sbjct: 140 LRINPDVDA-KTHPYISTGLKANKFGI-AYADALEAYHYAAQQPNLKIIGIDCHIGSQLT 197
Query: 201 KFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFS--FTNSNTKSFQEAASIIKEALH 258
+ A + + A G + LD+GGG + + N A ++
Sbjct: 198 DLSPLVEACERILILVDALAAEG-IVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQ---- 252
Query: 259 AYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNYWINDGKYGS----- 313
+L+ L++I EPGR +A +L T++ + +GE +N+ + D
Sbjct: 253 -----KLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVK-YGEEKNFVMVDAAMNDLMRPA 306
Query: 314 -FDWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVT 372
+D ++ EA+ +K ++ T + + GP C+ D + E
Sbjct: 307 LYDAYHHIEAV-------------ETKDIA-TLTANIVGPICETGD-FLGKDRTIACEEG 351
Query: 373 DWLVFSEMGAYTRARGTNFNGYNTAA 398
D L+ GAY + +N+N N AA
Sbjct: 352 DLLLIRSAGAYGASMASNYNARNRAA 377
>sp|Q9JWA6|DCDA_NEIMA Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=lysA PE=3 SV=1
Length = 406
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 159/386 (41%), Gaps = 48/386 (12%)
Query: 33 PFYILDLGVVVTLYNQMISKLPMIHP--HYAVKCNPEPALLEALAALGSNFDCASRSEIE 90
P Y+ + + + + P YAVK N ++++ A+LGS FD S E+
Sbjct: 20 PLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELA 79
Query: 91 AVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPK----CDLL 146
VLA G + I++ K + I++A N GV +S+ E+ +I+K + +
Sbjct: 80 RVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVS 139
Query: 147 IRIKPPDDSGAKHPLDS------KYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAAT 200
+R+ P D+ HP S K+G+ + + AA+ L ++G+ HIGS T
Sbjct: 140 LRVNPDVDA-KTHPYISTGLKANKFGI-AYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197
Query: 201 KFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEALHAY 260
+ A + + A G + LD+GGG + A +A
Sbjct: 198 DLSPLVEACERILILVDALAAEG-IVLEHLDLGGGVGIVYQDEDVPDLGA-------YAQ 249
Query: 261 FPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNYWINDGKYGS------F 314
+L+ L++I EPGR +A L T++ + +GE +N+ + D +
Sbjct: 250 AVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVK-YGEEKNFVMVDAAMNDLMRPALY 308
Query: 315 DWVNYDEAI--AKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPELEVT 372
D ++ EA+ PLT + + GP C+ D + E
Sbjct: 309 DAYHHIEAVEPKNIAPLT----------------ANIVGPICETGD-FLGKDRTIACEEG 351
Query: 373 DWLVFSEMGAYTRARGTNFNGYNTAA 398
D L+ GAY + +N+N N AA
Sbjct: 352 DLLLIRSAGAYGASMASNYNARNRAA 377
>sp|Q9RTK2|DCDA_DEIRA Diaminopimelate decarboxylase OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=lysA PE=3 SV=1
Length = 379
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 141/335 (42%), Gaps = 52/335 (15%)
Query: 60 YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAAN 119
YA+K NP LL AA G F+C S E+ A G +R+I P K + AA
Sbjct: 45 YAMKANPNLNLLRRYAAAGVGFECVSLGELLRAEAAGAGGERMILNGPAKSDAEYAAAAR 104
Query: 120 VGVNLTTFDSVEELHKIRKWHPKCDLLIRIKPPDDSGAKHPL-----DSKYGVDHHPQEI 174
+G + D EE+ + P +L+R+ P L SK+G+ P+++
Sbjct: 105 LGATIVV-DREEEVVLL---PPGSRVLVRVNPAMTVSTHEHLATGTARSKFGLT--PEQV 158
Query: 175 VPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGG 234
L +G V+G+ HIGSA + + A A V E A +G + VL++GG
Sbjct: 159 PGTLAELRDAGHEVLGLHMHIGSAIEQAEDFTAAFA---RVTELRAHIGG--LSVLNVGG 213
Query: 235 GFSFTNSNTKSF----QEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYT 290
G+S N++ + EAA + G+ L V EPGR+ SA L T
Sbjct: 214 GWSL-NADLEGIAYEAHEAARVF--------------GAELWV--EPGRYLVASAGWLLT 256
Query: 291 QIIGKRVHGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLASS--LTTSKGLSRTYNSK 348
+++G + G RN+ + D F P+ +S L T
Sbjct: 257 RVVGTKRTG--RNFCLVDAGMTEF-----------LRPMLYGASHPLYPMWDALATEVWD 303
Query: 349 VFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAY 383
V GP C++ D + G LP + L+ E GAY
Sbjct: 304 VAGPACESGDLIARGVPLPTPQRGHLLLIGEAGAY 338
>sp|O67262|DCDA_AQUAE Diaminopimelate decarboxylase OS=Aquifex aeolicus (strain VF5)
GN=lysA PE=1 SV=1
Length = 420
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 148/350 (42%), Gaps = 30/350 (8%)
Query: 60 YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAAN 119
YAVK N P L++ L LG+ D S E+ G+ P+RI+YA K + A +
Sbjct: 62 YAVKANFNPHLVKLLGELGAGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVD 121
Query: 120 VGVNLTTFDSVEELHKIR----KWHPKCDLLIRIKPPDDSGAKHPL------DSKYGVDH 169
+ + +S +EL + K K + IR+ P D HP SK+GVD
Sbjct: 122 SEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKT-HPYIATGMQKSKFGVD- 179
Query: 170 HPQEIVPLLE-AAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMR 228
+E E A++ L +VG+ HIGS + YR A+ +++E+ + G + ++
Sbjct: 180 -IREAQKEYEYASKLENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFD-IK 237
Query: 229 VLDIGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTL 288
LDIGGG + + A + + L N ++I EPGR +A L
Sbjct: 238 YLDIGGGLGI-KYKPEDKEPAPQDLADLLKDLLEN-----VKAKIILEPGRSIMGNAGIL 291
Query: 289 YTQIIGKRVHGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSK 348
TQ+ + G +++ I D + A P+ + +
Sbjct: 292 ITQVQFLKDKGS-KHFIIVDAGMNDLIRPSIYNAYHHIIPVETKE--------RKKVVAD 342
Query: 349 VFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFNGYNTAA 398
+ GP C+ D + ++ E++ ++L GAY A +++N AA
Sbjct: 343 IVGPICETGDFLALDREIEEVQRGEYLAVLSAGAYGFAMSSHYNMRPRAA 392
>sp|Q9PII5|DCDA_CAMJE Diaminopimelate decarboxylase OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=lysA PE=3 SV=1
Length = 402
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 155/386 (40%), Gaps = 40/386 (10%)
Query: 26 RQEFDEVPFYILDLGVVVTLYNQMIS--KLPMIHPHYAVKCNPEPALLEALAALGSNFDC 83
+QEF+ PFYI + + + + K YAVK N +LL+ LA L S FDC
Sbjct: 7 KQEFN-TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDC 65
Query: 84 ASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKI----RKW 139
S E++ L G +II++ K ++ A + +S E+ + ++
Sbjct: 66 VSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKEL 125
Query: 140 HPKCDLLIRIKPPDDSGAKHPL------DSKYGVDHHPQEIVPLLEAAEASGLSVVGVAF 193
+ K + IR+ P D+ HP ++K+GV+ + L A +S L VGV F
Sbjct: 126 NLKARISIRVNPNVDAKT-HPYISTGLNENKFGVEIDIARKMYLY-AKNSSFLEPVGVHF 183
Query: 194 HIGSAATKFA-AYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFSFT---NSNTKSFQEA 249
HIGS + + A AK V E A ++ DIGGG N +
Sbjct: 184 HIGSQLLDISPIHEAAAIVAKLVRELKAL--QIDLKFFDIGGGLGVAYEKNECEPDLYDY 241
Query: 250 ASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNYWINDG 309
A I LH G L + EPGR+ + ++ ++ + + + + DG
Sbjct: 242 AQGILAQLH---------GLDLTIGMEPGRYLVAKSGEFVCSVLYEK-QNKTKRFVVVDG 291
Query: 310 KYGSFDWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLPEL 369
+ EA + L ++G + V G C++ D LP
Sbjct: 292 AMNDLIRPSLYEAYHEII-------LPYNQGEESLCD--VVGGICESGDFFAKARSLPST 342
Query: 370 EVTDWLVFSEMGAYTRARGTNFNGYN 395
+ D +V GAY + +N+N N
Sbjct: 343 QSDDIMVIKNTGAYGFSMSSNYNTRN 368
>sp|P44316|DCDA_HAEIN Diaminopimelate decarboxylase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=lysA PE=3 SV=1
Length = 415
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 163/378 (43%), Gaps = 51/378 (13%)
Query: 58 PH---YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHI 114
PH +AVK +L +A LGS FD S+ E+E VLA G +++++ K I
Sbjct: 52 PHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEI 111
Query: 115 KYAANVGVNLTTFDSVEELHKIRKWHPKCDLLIRIKP------PDDSGAKHPL------D 162
A V + +SV EL I + + + +I P PD HP +
Sbjct: 112 MRALEVRIRCFNVESVSELKHINQIAGE---MGKIAPISLRVNPDVDAHTHPYISTGLKE 168
Query: 163 SKYGVD-HHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAAR 221
+K+GV + +E+ L A+ + + G+ HIGS T+ + A + E
Sbjct: 169 NKFGVSVNEAREVYKL--ASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKE 226
Query: 222 LGNNKMRVLDIGGGF--SFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSLRVISEPGR 279
G ++ LD+GGG ++T+ + A+ + E L Y L +I EPGR
Sbjct: 227 DGIT-LKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKNY--------PELEIILEPGR 277
Query: 280 FFTYSAFTLYTQIIGKRVHGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTTSK 339
+ +A L ++ + + E RN+ I D G D + A + + +L K
Sbjct: 278 AISANAGILVAKVQYLKSN-ESRNFAITDT--GMNDMIRPALYEAYMNIVEIDRTLEREK 334
Query: 340 GLSRTYNSKVFGPTCDAADEVFSGHKLPELEVT--DWLVFSEMGAYTRARGTNFNGY-NT 396
+ Y+ V GP C+ +D F G K EL + D++ GAY + +N+N T
Sbjct: 335 AI---YD--VVGPVCETSD--FLG-KQRELSIAEGDYIAQCSAGAYGASMSSNYNSRART 386
Query: 397 AAI-----PTYVVRSNRT 409
A + +Y++R T
Sbjct: 387 AEVLVDGDQSYLIRRRET 404
>sp|P57513|DCDA_BUCAI Diaminopimelate decarboxylase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=lysA PE=3 SV=1
Length = 415
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 69/407 (16%)
Query: 33 PFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIEAV 92
PF++ D ++ N ++ K +I +A K +L + D S EIE
Sbjct: 27 PFWVYDADIIYKKIN-LLRKFDVIR--FAQKSCSNINILRLMKNKNVKIDAVSLGEIERA 83
Query: 93 LALGVSP--DRIIY-ANPCKPVSHIKYAA-NVGVNLTTFDSVEELHKIRKWHPKCDLLIR 148
L G P + II+ A+ + +K A + VN + D +++L KI P + +R
Sbjct: 84 LLSGFKPSTNEIIFTADILDEETLLKVAKYKIPVNAGSLDMLKQLGKIS---PGHHVWLR 140
Query: 149 IKPPDDSGAKHPLD-----SKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFA 203
I P G + SK+G+ HP++ +P+++ + L ++G+ HIGS
Sbjct: 141 INPRFGYGHSKKTNTGGENSKHGI-WHPEQAIPIIKKYK---LKLIGLHMHIGSGVNYLH 196
Query: 204 AYRGAIAAAKAVFETAARLGNNKMRVLDIGGG----FSFTNS--NTKSFQEAASIIKEAL 257
+ + A K F+ N K+ + +GGG + F + + K + I ++ +
Sbjct: 197 LKKVSQAMIKYAFQL-----NQKISSISVGGGLPIPYKFNDQPIDIKKYFMLWDIARKKI 251
Query: 258 HAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNYWINDGKYGSFDWV 317
+ G + + EPGRF + L +++ + K G+ ++V
Sbjct: 252 SKFL------GEKIELEIEPGRFLVAESGILISKVWATK-------------KMGNKNFV 292
Query: 318 NYDEAIAKCTPLTLASS---LTTSKGLSRTYNSK------VFGPTCDAADEVFSG----- 363
D T+ S ++ G R N K V GP C++ D +F+
Sbjct: 293 LVDVGFNDLMRPTMYGSYHHISVIYGDDRKMNEKETIDTVVAGPLCESGD-IFTQKEGGT 351
Query: 364 ---HKLPELEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYVVRSN 407
KLP ++V D+L+F + GAY A +N+N IP ++++N
Sbjct: 352 VQTRKLPTIKVGDYLIFHDTGAYGAAMSSNYN--TRPLIPEILLKNN 396
>sp|Q94A94|DCDA2_ARATH Diaminopimelate decarboxylase 2, chloroplastic OS=Arabidopsis
thaliana GN=LYSA2 PE=2 SV=1
Length = 489
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 138/350 (39%), Gaps = 39/350 (11%)
Query: 60 YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAAN 119
YA+K N +LE L +LG S +E+ L G P + I+ K + + AA
Sbjct: 127 YAIKANNNLKILEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQ 186
Query: 120 VGVNLTTFDSVEELHKI----RKWHPKCDLLIRIKPPDDSGAKHPL------DSKYGVDH 169
GV DS +L+ I R + ++L+RI P D HP +SK+G+ +
Sbjct: 187 EGV-FVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQV-HPYVATGNKNSKFGIRN 244
Query: 170 HPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRV 229
+ A L +VG H+GS TK +R A + R G ++
Sbjct: 245 EKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQG-FEVSY 303
Query: 230 LDIGGGFSFTNSNTKSFQEAASIIKEALHAYFP-NELLPGSSLRVISEPGRFFTYSAFTL 288
L+IGGG + A +++ + EL+ L +I EPGR +
Sbjct: 304 LNIGGGLGI------DYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCF 357
Query: 289 YTQIIGKRVHGEMRNYWINDGKYGS------FDWVNYDEAIAKCTPLTLASSLTTSKGLS 342
+ G + +G +N+ + DG +D + E ++ P +
Sbjct: 358 VNHVTGVKTNG-TKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEAEVTKF------- 409
Query: 343 RTYNSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
V GP C++AD + +LP LV + GAY + + +N
Sbjct: 410 -----DVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYN 454
>sp|Q6ZG77|DCDA_ORYSJ Probable diaminopimelate decarboxylase, chloroplastic OS=Oryza
sativa subsp. japonica GN=LYSA PE=2 SV=1
Length = 490
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 151/385 (39%), Gaps = 48/385 (12%)
Query: 30 DEVPFYILDLGVVV---TLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASR 86
+ PFY+ VV T Y + L I YAVK N +L+ L LG S
Sbjct: 95 ERTPFYLYSKPQVVRNFTAYRDALEGLRSI-VGYAVKANNNLRVLQLLRELGCGAVLVSG 153
Query: 87 SEIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKI----RKWHPK 142
+E+ L G P R I+ K + + AA GV DS +L I R K
Sbjct: 154 NELRLALRAGFDPTRCIFNGNGKTLEDLVLAAESGV-FVNIDSEFDLENIVTAARVAGKK 212
Query: 143 CDLLIRIKPPDDSGAKHPL------DSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIG 196
+L+RI P D HP SK+G+ + + + ++ +++VGV H+G
Sbjct: 213 VPVLLRINPDVDPQV-HPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLG 271
Query: 197 SAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGGFSFTNSNTKSFQEAASIIKEA 256
S TK +R A A + R ++ L+IGGG +T + +
Sbjct: 272 STITKVDIFRDA-AGLMVNYVDEIRAQGFELEYLNIGGGLGIDYHHTDAVLPTPMDLINT 330
Query: 257 LHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNYWINDGK------ 310
+ EL+ L +I EPGR + ++ G + +G +N+ + DG
Sbjct: 331 VR-----ELVLSRDLTLIIEPGRSLIANTCCFVNRVTGVKSNG-TKNFIVVDGSMAELIR 384
Query: 311 ---YGSFDWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLP 367
YG++ + L + + + GP C++AD + +LP
Sbjct: 385 PSLYGAYQHI----------------ELVSPSPDAEVATFDIVGPVCESADFLGKDRELP 428
Query: 368 ELEVTDWLVFSEMGAYTRARGTNFN 392
+ LV + GAY + + +N
Sbjct: 429 TPDKGAGLVVHDAGAYCMSMASTYN 453
>sp|Q949X7|DCDA1_ARATH Diaminopimelate decarboxylase 1, chloroplastic OS=Arabidopsis
thaliana GN=LYSA1 PE=1 SV=1
Length = 484
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 140/347 (40%), Gaps = 33/347 (9%)
Query: 60 YAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYAAN 119
YA+K N +LE L +LG S +E+ L G P + I+ K + + AA
Sbjct: 122 YAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQ 181
Query: 120 VGVNLTTFDSVEELHKI----RKWHPKCDLLIRIKPPDDSGAKHPL------DSKYGVDH 169
GV DS +L+ I R + ++L+RI P D HP +SK+G+ +
Sbjct: 182 EGV-FVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQV-HPYVATGNKNSKFGIRN 239
Query: 170 HPQEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRV 229
+ A L +VG H+GS TK +R A + R G ++
Sbjct: 240 EKLQWFLDQVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQG-FEVSY 298
Query: 230 LDIGGGFSFTNSNTKSFQEAASIIKEALHAYFP-NELLPGSSLRVISEPGRFFTYSAFTL 288
L+IGGG + A +++ + EL+ L +I EPGR +
Sbjct: 299 LNIGGGLGI------DYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCF 352
Query: 289 YTQIIGKRVHGEMRNYWINDGKYGSFDWVN-YD--EAIAKCTPLTLASSLTTSKGLSRTY 345
+ G + +G +N+ + DG + YD + I +P + +T
Sbjct: 353 VNHVTGVKTNG-TKNFIVIDGSMAELIRPSLYDAYQHIELVSPPPAEAEVT--------- 402
Query: 346 NSKVFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFN 392
V GP C++AD + +LP LV + GAY + + +N
Sbjct: 403 KFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYN 449
>sp|Q9X1K5|DCDA_THEMA Diaminopimelate decarboxylase OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=lysA PE=1 SV=1
Length = 386
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 148/360 (41%), Gaps = 45/360 (12%)
Query: 58 PHYAVKCNPEPALLEALAALGSNFDCASRSEIEAVLALGVSPDRIIYANPCKPVSHIKYA 117
P +AVK N P LL+ L G D ++ E+ A GV +++ K +++
Sbjct: 41 PTFAVKANNNPVLLKILREEGFGMDVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQMEHF 100
Query: 118 ANVGVNLTTFDSVEELHKIRKWHPK-CDLLIRIKPPDDSGAKHPLDSKYGVDHHP----- 171
V + DS EE+ R+ +P+ + IR+ P D+ HP S G+ H
Sbjct: 101 LREDVRIVNVDSFEEMEIWRELNPEGVEYFIRVNPEVDA-KTHPHIST-GLKKHKFGIPL 158
Query: 172 QEIVPLLEAAEASGLSVVGVAFHIGSAATKFAAYRGAIAAAKAVFETAARLGNNKMRVLD 231
+++ +E + +++ G+ HIGS T+ + + A V + R G + ++
Sbjct: 159 EDLDSFMERFRS--MNIRGLHVHIGSQITRVEPF---VEAFSKVVRASERYGFEE---IN 210
Query: 232 IGGGFSFTNSNTKSFQEAASIIKEALHAYFPNELLPGSSL--RVISEPGRFFTY-SAFTL 288
IGGG+ S +E + + +++P RVI E GR+ S + L
Sbjct: 211 IGGGWGINYSG-----------EELDLSSYREKVVPDLKRFKRVIVEIGRYIVAPSGYLL 259
Query: 289 YTQIIGKRVHGEMRNYWINDGKYGSFDWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSK 348
++ KR H + + + DG + + + + + +
Sbjct: 260 LRVVLVKRRHN--KAFVVVDGGMN---------VLIRPALYSAYHRIFVLGKQGKEMRAD 308
Query: 349 VFGPTCDAADEVFSGHKLPELEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYV-VRSN 407
V GP C++ D + +LPE+E D + GAY T N YN+ P V VR N
Sbjct: 309 VVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGY---TMSNNYNSTTRPAEVLVREN 365
>sp|Q8A800|DCDA_BACTN Diaminopimelate decarboxylase OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=lysA PE=3 SV=1
Length = 386
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 158/393 (40%), Gaps = 52/393 (13%)
Query: 31 EVPFYILDLGVV---VTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRS 87
+ PFY D V+ ++ NQ ++K P HYAVK N P +L + G DC S
Sbjct: 14 QTPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMGADCVSGG 73
Query: 88 EIEAVLALGVSPDRIIYANPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKW----HPKC 143
EI A + G ++I++A K I G+ +S+ EL I + +
Sbjct: 74 EIRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKIA 133
Query: 144 DLLIRIKPPDDSGAK-HP------LDSKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIG 196
++ RI P D GA H ++K+G+ + V + A E + +G+ FHIG
Sbjct: 134 NVAFRINP--DVGAHTHANITTGLAENKFGISMQDMDRV-IDVALEMKNVKFIGLHFHIG 190
Query: 197 SAATKFAAYRGAIAAAKAVFETAARLGNNKMRV--LDIGGGF--SFTNSNTKSFQEAASI 252
S + IA V E +L ++ V +++GGG + + N +S +
Sbjct: 191 SQILDMGDF---IALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQSVPD---- 243
Query: 253 IKEALHAYFPN-----ELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNYWIN 307
+YF +L P +L E GR +L ++++ + G + + I
Sbjct: 244 ----FKSYFATYAGQLKLRPYQTLHF--ELGRAVVGQCGSLISKVLYVK-QGTKKKFAIL 296
Query: 308 DGKYGSFDWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADEVFSGHKLP 367
D +A K + TS+ Y+ V GP C+++D L
Sbjct: 297 DAGMTDLIRPALYQAYHKMENI-------TSEEPVEAYD--VVGPICESSDVFGKAIDLN 347
Query: 368 ELEVTDWLVFSEMGAYTRARGTNFNGYNTAAIP 400
+++ D + GAY + GYN +P
Sbjct: 348 KVKRGDLIALRSAGAYGEIMAS---GYNCRELP 377
>sp|Q8K9C4|DCDA_BUCAP Diaminopimelate decarboxylase OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=lysA PE=3 SV=1
Length = 415
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 169/418 (40%), Gaps = 84/418 (20%)
Query: 31 EVPFYILDLGVVVTLYNQMISKLPMIHPHYAVKCNPEPALLEALAALGSNFDCASRSEIE 90
+ PF++ D ++ N ++ + ++ +A K +L + D S EIE
Sbjct: 25 QSPFWVYDSNIIHKKIN-LLKEFDIVR--FAQKACSNIHILRLMKQKNIKVDAVSLGEIE 81
Query: 91 AVLALGVSPD--RIIYA------NPCKPVSHIKYAANVGVNLTTFDSVEELHKIRKWHPK 142
L G P+ II+ V K N G S++ L ++ K P
Sbjct: 82 RALVAGFKPNSNEIIFTADLFDEETLSKVIDFKIPVNAG-------SIDMLEQLGKLSPG 134
Query: 143 CDLLIRIKPPDDSGAKHPLD-----SKYGVDHHPQEIVPLLEAAEASGLSVVGVAFHIGS 197
+ +RI P G + SK+G+ +P+ +P+++ + L ++G+ HIGS
Sbjct: 135 HHVWLRINPGFGHGHSKKTNTGGENSKHGI-WNPRLAIPIIKKYK---LKLIGLHMHIGS 190
Query: 198 AATKFAAYRGAIAAAKAVFETAARLGNNKMRVLDIGGG----FSFTNS--NTKSF----Q 247
Y+ +A+ E A + N K+ + GGG ++F +TK +
Sbjct: 191 GVN----YKHLKKVGQAMIEKAMEI-NEKILFISAGGGLPIPYTFNEKPIDTKKYFIIWD 245
Query: 248 EAASIIKEALHAYFPNELLPGSSLRVISEPGRFFTYSAFTLYTQIIGKRVHGEMRNYWIN 307
EA I L+ E+ EPGRF + L +Q+ + G+ I+
Sbjct: 246 EARKKISRFLNTPIQLEI----------EPGRFLVAESGILISQVRAIKKMGDKNFVLID 295
Query: 308 DG--------KYGSFDWVNYDEAIAKCTPLTLASSLTTSKGLSRTYNSKVFGPTCDAADE 359
G YGS+ V ++ + + + T ++ + GP C++ D
Sbjct: 296 AGFNDLMRPTMYGSYHHV------------SVVTKDDRNIHETETIDTIIGGPLCESGD- 342
Query: 360 VFSG--------HKLPELEVTDWLVFSEMGAYTRARGTNFNGYNTAAIPTYVVRSNRT 409
+F+ KLP L++ D+L+F ++GAY + +N YNT + ++ N T
Sbjct: 343 IFTQKEGGNITTRKLPILKIGDYLIFHDVGAYGASMSSN---YNTRPLIQEILLENNT 397
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,525,740
Number of Sequences: 539616
Number of extensions: 6340712
Number of successful extensions: 15974
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 15677
Number of HSP's gapped (non-prelim): 155
length of query: 409
length of database: 191,569,459
effective HSP length: 120
effective length of query: 289
effective length of database: 126,815,539
effective search space: 36649690771
effective search space used: 36649690771
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)